Multiple sequence alignment - TraesCS6A01G127300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G127300 chr6A 100.000 4154 0 0 1 4154 100358260 100354107 0.000000e+00 7672.0
1 TraesCS6A01G127300 chr6A 86.544 2601 305 27 713 3303 100363718 100361153 0.000000e+00 2822.0
2 TraesCS6A01G127300 chr6A 88.333 1860 194 17 682 2537 100742874 100744714 0.000000e+00 2211.0
3 TraesCS6A01G127300 chr6A 81.326 1976 352 11 1033 2995 98249953 98247982 0.000000e+00 1589.0
4 TraesCS6A01G127300 chr6A 74.936 2330 516 52 842 3141 100738067 100740358 0.000000e+00 1005.0
5 TraesCS6A01G127300 chr6A 75.115 1957 429 49 1052 2985 100755458 100757379 0.000000e+00 863.0
6 TraesCS6A01G127300 chr6A 87.621 412 26 9 3 403 100074254 100073857 4.900000e-124 455.0
7 TraesCS6A01G127300 chr6A 98.113 53 1 0 3496 3548 100354613 100354561 4.420000e-15 93.5
8 TraesCS6A01G127300 chr6A 98.113 53 1 0 3648 3700 100354765 100354713 4.420000e-15 93.5
9 TraesCS6A01G127300 chr6D 85.548 2754 331 37 742 3460 83205494 83202773 0.000000e+00 2819.0
10 TraesCS6A01G127300 chr6D 80.699 2088 389 11 1058 3141 83020770 83018693 0.000000e+00 1611.0
11 TraesCS6A01G127300 chr6D 76.260 2262 480 43 1033 3273 83108489 83106264 0.000000e+00 1149.0
12 TraesCS6A01G127300 chr6D 90.431 418 33 5 421 835 83047481 83047068 1.020000e-150 544.0
13 TraesCS6A01G127300 chr6D 84.672 411 26 15 3 403 83048249 83047866 3.920000e-100 375.0
14 TraesCS6A01G127300 chr6D 73.114 517 74 44 61 538 83161307 83160817 1.570000e-24 124.0
15 TraesCS6A01G127300 chr6D 96.053 76 3 0 4079 4154 83202201 83202126 1.570000e-24 124.0
16 TraesCS6A01G127300 chr6B 85.290 2760 334 41 742 3460 158190164 158187436 0.000000e+00 2782.0
17 TraesCS6A01G127300 chr6B 84.411 2816 305 59 682 3461 159390168 159392885 0.000000e+00 2645.0
18 TraesCS6A01G127300 chr6B 80.703 2218 396 23 1058 3268 157900387 157902579 0.000000e+00 1696.0
19 TraesCS6A01G127300 chr6B 81.195 1941 350 14 1064 2995 156533117 156531183 0.000000e+00 1548.0
20 TraesCS6A01G127300 chr6B 90.931 419 31 4 421 835 158077363 158076948 1.300000e-154 556.0
21 TraesCS6A01G127300 chr6B 89.119 193 12 3 6 196 158087285 158087100 8.980000e-57 231.0
22 TraesCS6A01G127300 chr6B 96.241 133 2 3 3758 3888 333822081 333821950 9.040000e-52 215.0
23 TraesCS6A01G127300 chr6B 96.241 133 2 3 3758 3888 333895498 333895367 9.040000e-52 215.0
24 TraesCS6A01G127300 chr6B 97.368 76 2 0 4079 4154 158186866 158186791 3.370000e-26 130.0
25 TraesCS6A01G127300 chr7B 98.425 127 2 0 3758 3884 29313247 29313121 1.500000e-54 224.0
26 TraesCS6A01G127300 chr3B 96.241 133 4 1 3756 3887 779534220 779534352 2.510000e-52 217.0
27 TraesCS6A01G127300 chr1A 96.124 129 5 0 3759 3887 114551574 114551446 1.170000e-50 211.0
28 TraesCS6A01G127300 chr7A 96.063 127 5 0 3758 3884 37008428 37008302 1.510000e-49 207.0
29 TraesCS6A01G127300 chr3D 96.063 127 5 0 3758 3884 168186436 168186562 1.510000e-49 207.0
30 TraesCS6A01G127300 chr5D 95.276 127 6 0 3758 3884 57849924 57849798 7.040000e-48 202.0
31 TraesCS6A01G127300 chr4B 91.549 142 8 4 3750 3890 642778053 642778191 4.240000e-45 193.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G127300 chr6A 100354107 100358260 4153 True 2619.666667 7672 98.7420 1 4154 3 chr6A.!!$R4 4153
1 TraesCS6A01G127300 chr6A 100361153 100363718 2565 True 2822.000000 2822 86.5440 713 3303 1 chr6A.!!$R3 2590
2 TraesCS6A01G127300 chr6A 100738067 100744714 6647 False 1608.000000 2211 81.6345 682 3141 2 chr6A.!!$F2 2459
3 TraesCS6A01G127300 chr6A 98247982 98249953 1971 True 1589.000000 1589 81.3260 1033 2995 1 chr6A.!!$R1 1962
4 TraesCS6A01G127300 chr6A 100755458 100757379 1921 False 863.000000 863 75.1150 1052 2985 1 chr6A.!!$F1 1933
5 TraesCS6A01G127300 chr6D 83018693 83020770 2077 True 1611.000000 1611 80.6990 1058 3141 1 chr6D.!!$R1 2083
6 TraesCS6A01G127300 chr6D 83202126 83205494 3368 True 1471.500000 2819 90.8005 742 4154 2 chr6D.!!$R5 3412
7 TraesCS6A01G127300 chr6D 83106264 83108489 2225 True 1149.000000 1149 76.2600 1033 3273 1 chr6D.!!$R2 2240
8 TraesCS6A01G127300 chr6D 83047068 83048249 1181 True 459.500000 544 87.5515 3 835 2 chr6D.!!$R4 832
9 TraesCS6A01G127300 chr6B 159390168 159392885 2717 False 2645.000000 2645 84.4110 682 3461 1 chr6B.!!$F2 2779
10 TraesCS6A01G127300 chr6B 157900387 157902579 2192 False 1696.000000 1696 80.7030 1058 3268 1 chr6B.!!$F1 2210
11 TraesCS6A01G127300 chr6B 156531183 156533117 1934 True 1548.000000 1548 81.1950 1064 2995 1 chr6B.!!$R1 1931
12 TraesCS6A01G127300 chr6B 158186791 158190164 3373 True 1456.000000 2782 91.3290 742 4154 2 chr6B.!!$R6 3412

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
340 349 0.254462 TCAACCAACTGCACTGGTCA 59.746 50.000 14.66 4.08 46.75 4.02 F
1038 5174 0.254462 TATGCAGGAACCGATTGCCA 59.746 50.000 0.00 0.00 37.03 4.92 F
1273 5412 1.192146 TTCTCACGGTCTTGAGGGGG 61.192 60.000 4.93 0.00 42.95 5.40 F
1959 6098 1.199327 CTGCCATCAACACTGAGCAAG 59.801 52.381 0.00 0.00 33.68 4.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1407 5546 0.037882 CGTGCAGAGCTCCTCTCAAA 60.038 55.000 10.93 0.00 44.35 2.69 R
1917 6056 1.418637 TCCCCTGACAGGTTGTTGTAC 59.581 52.381 20.24 0.00 31.93 2.90 R
3146 7297 1.486310 CATTGGACTAGCACTAGCCCA 59.514 52.381 8.49 8.49 42.72 5.36 R
3936 8204 0.620556 ATGGTAAGGGTGCTCCAGTG 59.379 55.000 7.20 0.00 38.24 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
75 76 1.888512 ACCTGATGTTGATGTTGTGGC 59.111 47.619 0.00 0.00 0.00 5.01
100 101 2.421073 GTGTGCATAGCTTCAGCATTGA 59.579 45.455 10.05 0.00 45.16 2.57
105 106 4.103357 GCATAGCTTCAGCATTGACTTTG 58.897 43.478 0.75 0.00 45.16 2.77
109 110 3.187227 AGCTTCAGCATTGACTTTGTACG 59.813 43.478 0.75 0.00 45.16 3.67
113 114 3.874543 TCAGCATTGACTTTGTACGTGTT 59.125 39.130 0.00 0.00 0.00 3.32
115 116 5.524281 TCAGCATTGACTTTGTACGTGTTAA 59.476 36.000 0.00 0.00 0.00 2.01
118 119 6.910433 AGCATTGACTTTGTACGTGTTAAAAG 59.090 34.615 0.00 5.50 36.06 2.27
127 128 8.730970 TTTGTACGTGTTAAAAGATAATTGGC 57.269 30.769 0.00 0.00 0.00 4.52
128 129 7.436430 TGTACGTGTTAAAAGATAATTGGCA 57.564 32.000 0.00 0.00 0.00 4.92
129 130 7.872881 TGTACGTGTTAAAAGATAATTGGCAA 58.127 30.769 0.68 0.68 0.00 4.52
153 154 6.162079 ACAACATGACACTGACTAGATGAAG 58.838 40.000 0.00 0.00 0.00 3.02
174 175 6.267928 TGAAGTTAGAAAGCTAGGACAAGACT 59.732 38.462 0.00 0.00 0.00 3.24
190 191 3.010200 AGACTTCTGGGGAAATCATGC 57.990 47.619 0.00 0.00 31.01 4.06
196 197 1.878088 CTGGGGAAATCATGCGATCAG 59.122 52.381 0.00 0.00 0.00 2.90
219 220 3.085119 GCTTGCATGGCATGGACCC 62.085 63.158 27.48 14.71 38.76 4.46
227 228 2.757099 GCATGGACCCTGCCAAGG 60.757 66.667 10.46 0.00 42.16 3.61
228 229 2.757099 CATGGACCCTGCCAAGGC 60.757 66.667 3.61 3.61 42.96 4.35
252 260 1.134401 TGATGGGATGCCGAGAAGAAC 60.134 52.381 0.00 0.00 0.00 3.01
317 326 7.801716 ATGGCGATAGTTACAACACATTATT 57.198 32.000 0.00 0.00 39.35 1.40
319 328 6.019398 TGGCGATAGTTACAACACATTATTCG 60.019 38.462 0.00 0.00 39.35 3.34
322 331 7.945178 GCGATAGTTACAACACATTATTCGATC 59.055 37.037 0.00 0.00 39.35 3.69
323 332 8.964150 CGATAGTTACAACACATTATTCGATCA 58.036 33.333 0.00 0.00 0.00 2.92
326 335 7.748847 AGTTACAACACATTATTCGATCAACC 58.251 34.615 0.00 0.00 0.00 3.77
327 336 7.389330 AGTTACAACACATTATTCGATCAACCA 59.611 33.333 0.00 0.00 0.00 3.67
329 338 6.378582 ACAACACATTATTCGATCAACCAAC 58.621 36.000 0.00 0.00 0.00 3.77
330 339 6.206634 ACAACACATTATTCGATCAACCAACT 59.793 34.615 0.00 0.00 0.00 3.16
333 342 4.699735 ACATTATTCGATCAACCAACTGCA 59.300 37.500 0.00 0.00 0.00 4.41
334 343 4.678509 TTATTCGATCAACCAACTGCAC 57.321 40.909 0.00 0.00 0.00 4.57
335 344 2.254546 TTCGATCAACCAACTGCACT 57.745 45.000 0.00 0.00 0.00 4.40
337 346 0.518636 CGATCAACCAACTGCACTGG 59.481 55.000 8.30 8.30 40.05 4.00
339 348 1.537202 GATCAACCAACTGCACTGGTC 59.463 52.381 14.66 1.16 46.75 4.02
340 349 0.254462 TCAACCAACTGCACTGGTCA 59.746 50.000 14.66 4.08 46.75 4.02
341 350 0.381801 CAACCAACTGCACTGGTCAC 59.618 55.000 14.66 0.00 46.75 3.67
342 351 0.255890 AACCAACTGCACTGGTCACT 59.744 50.000 14.66 0.00 46.75 3.41
343 352 0.255890 ACCAACTGCACTGGTCACTT 59.744 50.000 9.52 0.00 44.05 3.16
344 353 1.488812 ACCAACTGCACTGGTCACTTA 59.511 47.619 9.52 0.00 44.05 2.24
345 354 2.106511 ACCAACTGCACTGGTCACTTAT 59.893 45.455 9.52 0.00 44.05 1.73
346 355 3.326588 ACCAACTGCACTGGTCACTTATA 59.673 43.478 9.52 0.00 44.05 0.98
347 356 3.935203 CCAACTGCACTGGTCACTTATAG 59.065 47.826 2.36 0.00 0.00 1.31
349 358 3.441101 ACTGCACTGGTCACTTATAGGA 58.559 45.455 0.00 0.00 0.00 2.94
350 359 3.449018 ACTGCACTGGTCACTTATAGGAG 59.551 47.826 0.00 0.00 0.00 3.69
351 360 3.441101 TGCACTGGTCACTTATAGGAGT 58.559 45.455 0.00 0.00 0.00 3.85
389 398 5.564550 AGAAACTATCTGCAATGACCACTT 58.435 37.500 0.00 0.00 36.88 3.16
395 404 2.038952 TCTGCAATGACCACTTACTGCT 59.961 45.455 0.00 0.00 0.00 4.24
415 791 7.776933 CTGCTGATAGCTGTTTCTAATTGTA 57.223 36.000 0.00 0.00 42.97 2.41
416 792 8.201554 CTGCTGATAGCTGTTTCTAATTGTAA 57.798 34.615 0.00 0.00 42.97 2.41
506 885 3.201290 CATGTACCTCCACATGCTCTTC 58.799 50.000 3.52 0.00 46.66 2.87
532 911 2.811902 TCAAGTACGTGTATCGACCG 57.188 50.000 8.68 0.00 42.86 4.79
539 918 1.202110 ACGTGTATCGACCGTGACATC 60.202 52.381 0.00 0.00 42.86 3.06
546 925 1.123655 CGACCGTGACATCGATGATG 58.876 55.000 31.33 14.96 44.71 3.07
555 934 5.234116 CGTGACATCGATGATGGAATGTAAA 59.766 40.000 31.33 0.00 43.60 2.01
568 947 9.521841 TGATGGAATGTAAATGTAAAACTGGTA 57.478 29.630 0.00 0.00 0.00 3.25
589 968 8.294954 TGGTAGTAGAAGAGGTCAGATTAAAG 57.705 38.462 0.00 0.00 0.00 1.85
594 973 9.261035 AGTAGAAGAGGTCAGATTAAAGATTGA 57.739 33.333 0.00 0.00 0.00 2.57
645 1024 6.258727 AGCTCGTGAATAAATTACAGTGGATG 59.741 38.462 0.00 0.00 0.00 3.51
647 1026 7.302350 TCGTGAATAAATTACAGTGGATGTG 57.698 36.000 0.00 0.00 43.80 3.21
651 1030 7.273381 GTGAATAAATTACAGTGGATGTGCAAC 59.727 37.037 0.00 0.00 43.80 4.17
677 1056 4.036852 GCCAATACCAGCTAATTCTTGACC 59.963 45.833 0.00 0.00 0.00 4.02
687 4814 6.012745 AGCTAATTCTTGACCCAAATTGACT 58.987 36.000 0.00 0.00 0.00 3.41
739 4866 3.345414 ACTGGTAGTAGAAGACGTCAGG 58.655 50.000 19.50 0.00 32.33 3.86
740 4867 3.244840 ACTGGTAGTAGAAGACGTCAGGT 60.245 47.826 19.50 1.73 32.33 4.00
755 4882 6.870439 AGACGTCAGGTTTAAGTATTAACACC 59.130 38.462 19.50 0.00 40.86 4.16
778 4905 3.553508 CCAATTTGTGCTTGGAAGTCAGG 60.554 47.826 0.00 0.00 44.95 3.86
811 4943 9.897744 AATAAATTACAGTGGATATGCAATTCG 57.102 29.630 0.00 0.00 0.00 3.34
835 4967 3.753294 ATACCAGCTAATCCTTGACCG 57.247 47.619 0.00 0.00 0.00 4.79
837 4969 0.541863 CCAGCTAATCCTTGACCGGT 59.458 55.000 6.92 6.92 0.00 5.28
839 4971 2.483188 CCAGCTAATCCTTGACCGGTAC 60.483 54.545 7.34 1.38 0.00 3.34
840 4972 1.761198 AGCTAATCCTTGACCGGTACC 59.239 52.381 7.34 0.16 0.00 3.34
843 4975 3.385755 GCTAATCCTTGACCGGTACCTTA 59.614 47.826 7.34 0.00 0.00 2.69
853 4985 5.424757 TGACCGGTACCTTATTTTCATCAG 58.575 41.667 7.34 0.00 0.00 2.90
864 4996 6.037172 CCTTATTTTCATCAGTAACGACCAGG 59.963 42.308 0.00 0.00 0.00 4.45
866 5000 4.819105 TTTCATCAGTAACGACCAGGAT 57.181 40.909 0.00 0.00 0.00 3.24
898 5032 0.908198 ATGGAGACCAGAGCAGGTTC 59.092 55.000 0.00 0.00 43.38 3.62
910 5044 1.002544 AGCAGGTTCTTCCTTTCCTCG 59.997 52.381 0.00 0.00 45.67 4.63
911 5045 1.946283 GCAGGTTCTTCCTTTCCTCGG 60.946 57.143 0.00 0.00 45.67 4.63
914 5048 3.007614 CAGGTTCTTCCTTTCCTCGGTTA 59.992 47.826 0.00 0.00 45.67 2.85
919 5053 4.927049 TCTTCCTTTCCTCGGTTACTCTA 58.073 43.478 0.00 0.00 0.00 2.43
929 5063 6.127101 TCCTCGGTTACTCTATCTTCATCAA 58.873 40.000 0.00 0.00 0.00 2.57
946 5082 9.996554 TCTTCATCAAAAACTAGTACTTCATCA 57.003 29.630 0.00 0.00 0.00 3.07
969 5105 1.470494 GCAGACCAAAGCTTAAGCCTC 59.530 52.381 23.71 10.51 43.38 4.70
985 5121 4.209307 AGCCTCTAGTTTCCAAGCTAAC 57.791 45.455 0.00 0.00 0.00 2.34
992 5128 3.067833 AGTTTCCAAGCTAACTTCTCGC 58.932 45.455 0.00 0.00 32.29 5.03
999 5135 3.027974 AGCTAACTTCTCGCGAAAACT 57.972 42.857 11.33 0.00 0.00 2.66
1019 5155 3.766591 ACTATGCAGCTACTCAGTCACTT 59.233 43.478 0.00 0.00 0.00 3.16
1021 5157 5.596361 ACTATGCAGCTACTCAGTCACTTAT 59.404 40.000 0.00 0.00 0.00 1.73
1022 5158 4.115401 TGCAGCTACTCAGTCACTTATG 57.885 45.455 0.00 0.00 0.00 1.90
1038 5174 0.254462 TATGCAGGAACCGATTGCCA 59.746 50.000 0.00 0.00 37.03 4.92
1194 5330 2.645567 CGGAGCGACACAGACTGT 59.354 61.111 1.07 1.07 34.96 3.55
1273 5412 1.192146 TTCTCACGGTCTTGAGGGGG 61.192 60.000 4.93 0.00 42.95 5.40
1274 5413 1.913762 CTCACGGTCTTGAGGGGGT 60.914 63.158 0.00 0.00 39.59 4.95
1393 5532 1.814394 GCAGCATCATTGTCCTTGACA 59.186 47.619 0.00 0.00 41.09 3.58
1407 5546 2.878406 CCTTGACATCAGTTTCAACCGT 59.122 45.455 0.00 0.00 0.00 4.83
1638 5777 4.963276 TGACCTCTGTTTCAACAAACTG 57.037 40.909 0.00 0.00 42.29 3.16
1802 5941 8.100164 TGATTTACATGGTGTTCTTGATAGTGA 58.900 33.333 0.00 0.00 0.00 3.41
1829 5968 6.646653 CGCATAATAAGCCTCAGAAATCTACA 59.353 38.462 0.00 0.00 0.00 2.74
1887 6026 6.696411 CAGGATTCCAGATTCTATAGGTGAC 58.304 44.000 5.29 0.00 0.00 3.67
1959 6098 1.199327 CTGCCATCAACACTGAGCAAG 59.801 52.381 0.00 0.00 33.68 4.01
2165 6304 2.244486 TTCCATGGAGAGCTCTCACT 57.756 50.000 37.67 24.41 44.60 3.41
2324 6463 1.749635 GCTCATGCCACAGGATGACAT 60.750 52.381 0.00 0.00 39.69 3.06
2350 6489 4.914983 TGATGGCTTTGAGAATCTTCAGT 58.085 39.130 0.00 0.00 34.92 3.41
2415 6554 7.227512 CCTCTATGGATATCAAGGTTCACAAAC 59.772 40.741 4.83 0.00 38.35 2.93
2554 6693 4.478317 TCCCATTAACCTTGATGGAGATGT 59.522 41.667 9.82 0.00 44.58 3.06
2851 7002 4.662179 ACAATCTCACAGGTGATATCCCAT 59.338 41.667 2.09 0.00 39.13 4.00
3052 7203 5.458779 GCCACTATTCTGTCAACAAAACAAC 59.541 40.000 0.00 0.00 0.00 3.32
3053 7204 6.680378 GCCACTATTCTGTCAACAAAACAACT 60.680 38.462 0.00 0.00 0.00 3.16
3141 7292 9.616156 GATCAGATAGTCCTATCGAGGTATTTA 57.384 37.037 8.31 0.00 44.93 1.40
3142 7293 9.976776 ATCAGATAGTCCTATCGAGGTATTTAA 57.023 33.333 8.31 0.00 44.93 1.52
3143 7294 9.803507 TCAGATAGTCCTATCGAGGTATTTAAA 57.196 33.333 8.31 0.00 44.93 1.52
3155 7306 6.540914 TCGAGGTATTTAAATTTGGGCTAGTG 59.459 38.462 5.91 0.00 0.00 2.74
3169 7324 4.608948 GGCTAGTGCTAGTCCAATGTAT 57.391 45.455 7.90 0.00 39.59 2.29
3180 7335 7.495606 TGCTAGTCCAATGTATGTATCTGTTTG 59.504 37.037 0.00 0.00 0.00 2.93
3200 7356 6.974048 TGTTTGTGTCAACTTTGATCAGATTG 59.026 34.615 0.00 2.59 39.73 2.67
3219 7375 5.652452 AGATTGGGTTGCTATTCAGGTTTAC 59.348 40.000 0.00 0.00 0.00 2.01
3235 7394 5.048991 CAGGTTTACCAACATGTCCAGTAAC 60.049 44.000 0.00 1.87 39.40 2.50
3236 7395 4.822896 GGTTTACCAACATGTCCAGTAACA 59.177 41.667 0.00 0.00 34.15 2.41
3237 7396 5.048991 GGTTTACCAACATGTCCAGTAACAG 60.049 44.000 0.00 0.00 34.15 3.16
3238 7397 3.857157 ACCAACATGTCCAGTAACAGT 57.143 42.857 0.00 0.00 31.50 3.55
3239 7398 4.967084 ACCAACATGTCCAGTAACAGTA 57.033 40.909 0.00 0.00 31.50 2.74
3240 7399 5.298989 ACCAACATGTCCAGTAACAGTAA 57.701 39.130 0.00 0.00 31.50 2.24
3241 7400 5.305585 ACCAACATGTCCAGTAACAGTAAG 58.694 41.667 0.00 0.00 31.50 2.34
3350 7541 7.092716 GGACAGTTCAAACATGAAGCAATATT 58.907 34.615 0.00 0.00 0.00 1.28
3351 7542 7.062605 GGACAGTTCAAACATGAAGCAATATTG 59.937 37.037 11.27 11.27 0.00 1.90
3356 7547 8.853345 GTTCAAACATGAAGCAATATTGTACAG 58.147 33.333 16.61 5.50 0.00 2.74
3357 7548 7.537715 TCAAACATGAAGCAATATTGTACAGG 58.462 34.615 16.61 16.02 0.00 4.00
3360 7551 6.186957 ACATGAAGCAATATTGTACAGGGAA 58.813 36.000 16.61 0.00 0.00 3.97
3363 7554 6.919721 TGAAGCAATATTGTACAGGGAAAAC 58.080 36.000 16.61 0.00 0.00 2.43
3365 7556 6.759497 AGCAATATTGTACAGGGAAAACTC 57.241 37.500 16.61 0.00 0.00 3.01
3366 7557 6.245408 AGCAATATTGTACAGGGAAAACTCA 58.755 36.000 16.61 0.00 0.00 3.41
3370 7561 5.767816 ATTGTACAGGGAAAACTCAACAC 57.232 39.130 0.00 0.00 0.00 3.32
3374 7565 5.364446 TGTACAGGGAAAACTCAACACTCTA 59.636 40.000 0.00 0.00 0.00 2.43
3394 7586 8.138712 CACTCTAGACTCTGTGTAACTCTTTTT 58.861 37.037 2.46 0.00 38.04 1.94
3448 7640 3.325716 ACCATTTCCTTTGCTTGCTGAAT 59.674 39.130 0.00 0.00 0.00 2.57
3462 7654 7.252708 TGCTTGCTGAATATTGAACAATACTG 58.747 34.615 9.04 4.38 36.24 2.74
3464 7656 7.395190 TTGCTGAATATTGAACAATACTGCT 57.605 32.000 17.98 5.19 36.24 4.24
3466 7658 8.504812 TGCTGAATATTGAACAATACTGCTTA 57.495 30.769 17.98 6.15 36.24 3.09
3468 7660 7.857885 GCTGAATATTGAACAATACTGCTTACC 59.142 37.037 9.04 0.00 36.24 2.85
3470 7662 9.407380 TGAATATTGAACAATACTGCTTACCAT 57.593 29.630 9.04 0.00 36.24 3.55
3471 7663 9.669353 GAATATTGAACAATACTGCTTACCATG 57.331 33.333 9.04 0.00 36.24 3.66
3473 7665 4.917385 TGAACAATACTGCTTACCATGGT 58.083 39.130 23.55 23.55 0.00 3.55
3474 7666 4.699735 TGAACAATACTGCTTACCATGGTG 59.300 41.667 28.17 12.89 0.00 4.17
3475 7667 4.568072 ACAATACTGCTTACCATGGTGA 57.432 40.909 28.17 18.86 0.00 4.02
3476 7668 4.917385 ACAATACTGCTTACCATGGTGAA 58.083 39.130 28.17 15.56 0.00 3.18
3477 7669 5.321102 ACAATACTGCTTACCATGGTGAAA 58.679 37.500 28.17 13.70 0.00 2.69
3478 7670 5.951747 ACAATACTGCTTACCATGGTGAAAT 59.048 36.000 28.17 10.18 0.00 2.17
3479 7671 6.127647 ACAATACTGCTTACCATGGTGAAATG 60.128 38.462 28.17 16.02 0.00 2.32
3480 7672 2.493278 ACTGCTTACCATGGTGAAATGC 59.507 45.455 28.17 20.04 0.00 3.56
3481 7673 2.756760 CTGCTTACCATGGTGAAATGCT 59.243 45.455 28.17 0.00 0.00 3.79
3482 7674 2.754552 TGCTTACCATGGTGAAATGCTC 59.245 45.455 28.17 7.98 0.00 4.26
3483 7675 2.099756 GCTTACCATGGTGAAATGCTCC 59.900 50.000 28.17 1.71 0.00 4.70
3484 7676 3.624777 CTTACCATGGTGAAATGCTCCT 58.375 45.455 28.17 0.00 0.00 3.69
3485 7677 2.134789 ACCATGGTGAAATGCTCCTC 57.865 50.000 18.99 0.00 0.00 3.71
3486 7678 1.341383 ACCATGGTGAAATGCTCCTCC 60.341 52.381 18.99 0.00 0.00 4.30
3487 7679 1.341285 CCATGGTGAAATGCTCCTCCA 60.341 52.381 2.57 0.00 33.50 3.86
3488 7680 2.662866 CATGGTGAAATGCTCCTCCAT 58.337 47.619 0.00 0.00 37.89 3.41
3489 7681 2.905415 TGGTGAAATGCTCCTCCATT 57.095 45.000 0.00 0.00 37.03 3.16
3490 7682 3.173953 TGGTGAAATGCTCCTCCATTT 57.826 42.857 0.22 0.22 45.37 2.32
3495 7687 2.519771 AATGCTCCTCCATTTCAGCA 57.480 45.000 0.00 0.00 45.65 4.41
3496 7688 2.519771 ATGCTCCTCCATTTCAGCAA 57.480 45.000 0.00 0.00 44.78 3.91
3497 7689 2.291209 TGCTCCTCCATTTCAGCAAA 57.709 45.000 0.00 0.00 38.93 3.68
3498 7690 1.888512 TGCTCCTCCATTTCAGCAAAC 59.111 47.619 0.00 0.00 38.93 2.93
3499 7691 1.888512 GCTCCTCCATTTCAGCAAACA 59.111 47.619 0.00 0.00 0.00 2.83
3500 7692 2.297033 GCTCCTCCATTTCAGCAAACAA 59.703 45.455 0.00 0.00 0.00 2.83
3501 7693 3.243839 GCTCCTCCATTTCAGCAAACAAA 60.244 43.478 0.00 0.00 0.00 2.83
3502 7694 4.301628 CTCCTCCATTTCAGCAAACAAAC 58.698 43.478 0.00 0.00 0.00 2.93
3503 7695 3.052036 CCTCCATTTCAGCAAACAAACG 58.948 45.455 0.00 0.00 0.00 3.60
3504 7696 2.468831 TCCATTTCAGCAAACAAACGC 58.531 42.857 0.00 0.00 0.00 4.84
3505 7697 2.159184 TCCATTTCAGCAAACAAACGCA 60.159 40.909 0.00 0.00 0.00 5.24
3506 7698 2.219216 CCATTTCAGCAAACAAACGCAG 59.781 45.455 0.00 0.00 0.00 5.18
3507 7699 1.919918 TTTCAGCAAACAAACGCAGG 58.080 45.000 0.00 0.00 0.00 4.85
3508 7700 1.098869 TTCAGCAAACAAACGCAGGA 58.901 45.000 0.00 0.00 0.00 3.86
3509 7701 1.098869 TCAGCAAACAAACGCAGGAA 58.901 45.000 0.00 0.00 0.00 3.36
3510 7702 1.474478 TCAGCAAACAAACGCAGGAAA 59.526 42.857 0.00 0.00 0.00 3.13
3511 7703 2.100584 TCAGCAAACAAACGCAGGAAAT 59.899 40.909 0.00 0.00 0.00 2.17
3512 7704 2.219216 CAGCAAACAAACGCAGGAAATG 59.781 45.455 0.00 0.00 0.00 2.32
3513 7705 2.100584 AGCAAACAAACGCAGGAAATGA 59.899 40.909 0.00 0.00 0.00 2.57
3514 7706 3.059166 GCAAACAAACGCAGGAAATGAT 58.941 40.909 0.00 0.00 0.00 2.45
3515 7707 3.120923 GCAAACAAACGCAGGAAATGATG 60.121 43.478 0.00 0.00 0.00 3.07
3516 7708 4.297510 CAAACAAACGCAGGAAATGATGA 58.702 39.130 0.00 0.00 0.00 2.92
3517 7709 4.582701 AACAAACGCAGGAAATGATGAA 57.417 36.364 0.00 0.00 0.00 2.57
3518 7710 4.582701 ACAAACGCAGGAAATGATGAAA 57.417 36.364 0.00 0.00 0.00 2.69
3519 7711 5.138125 ACAAACGCAGGAAATGATGAAAT 57.862 34.783 0.00 0.00 0.00 2.17
3520 7712 4.925054 ACAAACGCAGGAAATGATGAAATG 59.075 37.500 0.00 0.00 0.00 2.32
3521 7713 4.789012 AACGCAGGAAATGATGAAATGT 57.211 36.364 0.00 0.00 0.00 2.71
3522 7714 4.789012 ACGCAGGAAATGATGAAATGTT 57.211 36.364 0.00 0.00 0.00 2.71
3523 7715 4.737054 ACGCAGGAAATGATGAAATGTTC 58.263 39.130 0.00 0.00 0.00 3.18
3524 7716 4.460382 ACGCAGGAAATGATGAAATGTTCT 59.540 37.500 0.00 0.00 0.00 3.01
3525 7717 5.032863 CGCAGGAAATGATGAAATGTTCTC 58.967 41.667 0.00 0.00 0.00 2.87
3526 7718 5.032863 GCAGGAAATGATGAAATGTTCTCG 58.967 41.667 0.00 0.00 0.00 4.04
3527 7719 5.163723 GCAGGAAATGATGAAATGTTCTCGA 60.164 40.000 0.00 0.00 0.00 4.04
3528 7720 6.253746 CAGGAAATGATGAAATGTTCTCGAC 58.746 40.000 0.00 0.00 0.00 4.20
3529 7721 6.093219 CAGGAAATGATGAAATGTTCTCGACT 59.907 38.462 0.00 0.00 0.00 4.18
3530 7722 6.093219 AGGAAATGATGAAATGTTCTCGACTG 59.907 38.462 0.00 0.00 0.00 3.51
3531 7723 6.128172 GGAAATGATGAAATGTTCTCGACTGT 60.128 38.462 0.00 0.00 0.00 3.55
3532 7724 6.808008 AATGATGAAATGTTCTCGACTGTT 57.192 33.333 0.00 0.00 0.00 3.16
3533 7725 7.905604 AATGATGAAATGTTCTCGACTGTTA 57.094 32.000 0.00 0.00 0.00 2.41
3534 7726 8.498054 AATGATGAAATGTTCTCGACTGTTAT 57.502 30.769 0.00 0.00 0.00 1.89
3535 7727 9.599866 AATGATGAAATGTTCTCGACTGTTATA 57.400 29.630 0.00 0.00 0.00 0.98
3536 7728 9.770097 ATGATGAAATGTTCTCGACTGTTATAT 57.230 29.630 0.00 0.00 0.00 0.86
3537 7729 9.599866 TGATGAAATGTTCTCGACTGTTATATT 57.400 29.630 0.00 0.00 0.00 1.28
3539 7731 8.996024 TGAAATGTTCTCGACTGTTATATTCA 57.004 30.769 0.00 0.00 0.00 2.57
3540 7732 9.087424 TGAAATGTTCTCGACTGTTATATTCAG 57.913 33.333 6.19 6.19 38.68 3.02
3541 7733 7.470289 AATGTTCTCGACTGTTATATTCAGC 57.530 36.000 7.29 0.00 36.50 4.26
3542 7734 5.961272 TGTTCTCGACTGTTATATTCAGCA 58.039 37.500 7.29 0.00 36.50 4.41
3543 7735 6.394809 TGTTCTCGACTGTTATATTCAGCAA 58.605 36.000 7.29 0.00 36.50 3.91
3544 7736 6.871492 TGTTCTCGACTGTTATATTCAGCAAA 59.129 34.615 7.29 0.00 36.50 3.68
3545 7737 6.887376 TCTCGACTGTTATATTCAGCAAAC 57.113 37.500 7.29 0.00 36.50 2.93
3546 7738 6.394809 TCTCGACTGTTATATTCAGCAAACA 58.605 36.000 7.29 0.00 36.50 2.83
3547 7739 6.871492 TCTCGACTGTTATATTCAGCAAACAA 59.129 34.615 7.29 0.00 36.50 2.83
3548 7740 7.060600 TCGACTGTTATATTCAGCAAACAAG 57.939 36.000 7.29 0.00 36.50 3.16
3549 7741 6.649141 TCGACTGTTATATTCAGCAAACAAGT 59.351 34.615 7.29 0.00 36.50 3.16
3550 7742 6.738200 CGACTGTTATATTCAGCAAACAAGTG 59.262 38.462 7.29 0.00 36.50 3.16
3551 7743 7.510549 ACTGTTATATTCAGCAAACAAGTGT 57.489 32.000 7.29 0.00 36.50 3.55
3552 7744 7.940850 ACTGTTATATTCAGCAAACAAGTGTT 58.059 30.769 7.29 0.00 36.82 3.32
3553 7745 9.062524 ACTGTTATATTCAGCAAACAAGTGTTA 57.937 29.630 0.00 0.00 35.46 2.41
3555 7747 9.838975 TGTTATATTCAGCAAACAAGTGTTATG 57.161 29.630 0.00 0.53 37.25 1.90
3556 7748 9.840427 GTTATATTCAGCAAACAAGTGTTATGT 57.160 29.630 0.00 0.00 37.25 2.29
3559 7751 9.762933 ATATTCAGCAAACAAGTGTTATGTTTT 57.237 25.926 2.14 0.00 45.97 2.43
3560 7752 6.884096 TCAGCAAACAAGTGTTATGTTTTG 57.116 33.333 2.14 0.88 45.97 2.44
3561 7753 6.393990 TCAGCAAACAAGTGTTATGTTTTGT 58.606 32.000 2.14 0.00 45.97 2.83
3562 7754 6.870965 TCAGCAAACAAGTGTTATGTTTTGTT 59.129 30.769 2.14 0.00 45.97 2.83
3563 7755 8.029522 TCAGCAAACAAGTGTTATGTTTTGTTA 58.970 29.630 2.14 0.00 45.97 2.41
3564 7756 8.816144 CAGCAAACAAGTGTTATGTTTTGTTAT 58.184 29.630 2.14 0.00 45.97 1.89
3565 7757 8.816144 AGCAAACAAGTGTTATGTTTTGTTATG 58.184 29.630 2.14 5.00 45.97 1.90
3566 7758 8.599774 GCAAACAAGTGTTATGTTTTGTTATGT 58.400 29.630 2.14 0.00 45.97 2.29
3570 7762 9.515020 ACAAGTGTTATGTTTTGTTATGTTCTG 57.485 29.630 0.00 0.00 30.05 3.02
3571 7763 9.515020 CAAGTGTTATGTTTTGTTATGTTCTGT 57.485 29.630 0.00 0.00 0.00 3.41
3585 7777 8.717821 TGTTATGTTCTGTTACTTGTATTCAGC 58.282 33.333 7.88 0.00 0.00 4.26
3586 7778 8.717821 GTTATGTTCTGTTACTTGTATTCAGCA 58.282 33.333 0.00 0.00 0.00 4.41
3587 7779 7.744087 ATGTTCTGTTACTTGTATTCAGCAA 57.256 32.000 0.00 0.00 0.00 3.91
3588 7780 7.561021 TGTTCTGTTACTTGTATTCAGCAAA 57.439 32.000 0.00 0.00 0.00 3.68
3589 7781 7.414436 TGTTCTGTTACTTGTATTCAGCAAAC 58.586 34.615 0.00 8.43 0.00 2.93
3590 7782 7.066404 TGTTCTGTTACTTGTATTCAGCAAACA 59.934 33.333 0.00 11.57 0.00 2.83
3591 7783 7.561021 TCTGTTACTTGTATTCAGCAAACAA 57.439 32.000 0.00 0.00 0.00 2.83
3597 7789 6.738352 CTTGTATTCAGCAAACAAGTGTTC 57.262 37.500 6.33 0.00 43.20 3.18
3598 7790 5.826601 TGTATTCAGCAAACAAGTGTTCA 57.173 34.783 0.00 0.00 37.25 3.18
3599 7791 5.820131 TGTATTCAGCAAACAAGTGTTCAG 58.180 37.500 0.00 0.00 37.25 3.02
3600 7792 4.989279 ATTCAGCAAACAAGTGTTCAGT 57.011 36.364 0.00 0.00 37.25 3.41
3601 7793 3.763097 TCAGCAAACAAGTGTTCAGTG 57.237 42.857 0.00 0.00 37.25 3.66
3602 7794 3.081061 TCAGCAAACAAGTGTTCAGTGT 58.919 40.909 0.00 0.00 37.25 3.55
3603 7795 3.505680 TCAGCAAACAAGTGTTCAGTGTT 59.494 39.130 0.00 0.00 37.25 3.32
3604 7796 4.697828 TCAGCAAACAAGTGTTCAGTGTTA 59.302 37.500 0.00 0.00 37.25 2.41
3605 7797 5.356751 TCAGCAAACAAGTGTTCAGTGTTAT 59.643 36.000 0.00 0.00 37.25 1.89
3606 7798 5.456497 CAGCAAACAAGTGTTCAGTGTTATG 59.544 40.000 0.00 0.00 37.25 1.90
3607 7799 5.125417 AGCAAACAAGTGTTCAGTGTTATGT 59.875 36.000 0.00 0.00 37.25 2.29
3608 7800 5.804979 GCAAACAAGTGTTCAGTGTTATGTT 59.195 36.000 0.00 0.00 37.25 2.71
3609 7801 6.970043 GCAAACAAGTGTTCAGTGTTATGTTA 59.030 34.615 0.00 0.00 37.25 2.41
3610 7802 7.044314 GCAAACAAGTGTTCAGTGTTATGTTAC 60.044 37.037 0.00 0.00 37.25 2.50
3611 7803 7.859325 AACAAGTGTTCAGTGTTATGTTACT 57.141 32.000 0.00 0.00 33.80 2.24
3612 7804 7.859325 ACAAGTGTTCAGTGTTATGTTACTT 57.141 32.000 0.00 0.00 0.00 2.24
3613 7805 7.693952 ACAAGTGTTCAGTGTTATGTTACTTG 58.306 34.615 0.00 0.00 44.67 3.16
3614 7806 7.335924 ACAAGTGTTCAGTGTTATGTTACTTGT 59.664 33.333 11.74 11.74 46.14 3.16
3615 7807 8.822855 CAAGTGTTCAGTGTTATGTTACTTGTA 58.177 33.333 0.00 0.00 38.27 2.41
3616 7808 9.555727 AAGTGTTCAGTGTTATGTTACTTGTAT 57.444 29.630 0.00 0.00 0.00 2.29
3617 7809 9.555727 AGTGTTCAGTGTTATGTTACTTGTATT 57.444 29.630 0.00 0.00 0.00 1.89
3618 7810 9.807386 GTGTTCAGTGTTATGTTACTTGTATTC 57.193 33.333 0.00 0.00 0.00 1.75
3619 7811 8.995220 TGTTCAGTGTTATGTTACTTGTATTCC 58.005 33.333 0.00 0.00 0.00 3.01
3620 7812 9.216117 GTTCAGTGTTATGTTACTTGTATTCCT 57.784 33.333 0.00 0.00 0.00 3.36
3635 7827 9.209175 ACTTGTATTCCTAAATATTCATCGCTC 57.791 33.333 0.00 0.00 30.28 5.03
3636 7828 8.547967 TTGTATTCCTAAATATTCATCGCTCC 57.452 34.615 0.00 0.00 30.28 4.70
3637 7829 7.676004 TGTATTCCTAAATATTCATCGCTCCA 58.324 34.615 0.00 0.00 30.28 3.86
3638 7830 7.819415 TGTATTCCTAAATATTCATCGCTCCAG 59.181 37.037 0.00 0.00 30.28 3.86
3639 7831 5.808366 TCCTAAATATTCATCGCTCCAGT 57.192 39.130 0.00 0.00 0.00 4.00
3640 7832 5.541845 TCCTAAATATTCATCGCTCCAGTG 58.458 41.667 0.00 0.00 0.00 3.66
3641 7833 5.070446 TCCTAAATATTCATCGCTCCAGTGT 59.930 40.000 0.00 0.00 0.00 3.55
3642 7834 5.760253 CCTAAATATTCATCGCTCCAGTGTT 59.240 40.000 0.00 0.00 0.00 3.32
3643 7835 6.929049 CCTAAATATTCATCGCTCCAGTGTTA 59.071 38.462 0.00 0.00 0.00 2.41
3644 7836 6.851222 AAATATTCATCGCTCCAGTGTTAG 57.149 37.500 0.00 0.00 0.00 2.34
3645 7837 5.791336 ATATTCATCGCTCCAGTGTTAGA 57.209 39.130 0.00 0.00 0.00 2.10
3646 7838 4.679373 ATTCATCGCTCCAGTGTTAGAT 57.321 40.909 0.00 0.00 0.00 1.98
3647 7839 5.791336 ATTCATCGCTCCAGTGTTAGATA 57.209 39.130 0.00 0.00 0.00 1.98
3648 7840 5.592104 TTCATCGCTCCAGTGTTAGATAA 57.408 39.130 0.00 0.00 0.00 1.75
3649 7841 5.592104 TCATCGCTCCAGTGTTAGATAAA 57.408 39.130 0.00 0.00 0.00 1.40
3650 7842 5.348986 TCATCGCTCCAGTGTTAGATAAAC 58.651 41.667 0.00 0.00 38.67 2.01
3651 7843 4.794278 TCGCTCCAGTGTTAGATAAACA 57.206 40.909 0.00 0.00 45.90 2.83
3662 7854 6.621316 TGTTAGATAAACAAACGCAGGAAA 57.379 33.333 0.00 0.00 45.11 3.13
3663 7855 7.209471 TGTTAGATAAACAAACGCAGGAAAT 57.791 32.000 0.00 0.00 45.11 2.17
3664 7856 7.081349 TGTTAGATAAACAAACGCAGGAAATG 58.919 34.615 0.00 0.00 45.11 2.32
3665 7857 5.059404 AGATAAACAAACGCAGGAAATGG 57.941 39.130 0.00 0.00 0.00 3.16
3666 7858 4.522789 AGATAAACAAACGCAGGAAATGGT 59.477 37.500 0.00 0.00 0.00 3.55
3667 7859 2.507339 AACAAACGCAGGAAATGGTG 57.493 45.000 0.00 0.00 0.00 4.17
3668 7860 1.686355 ACAAACGCAGGAAATGGTGA 58.314 45.000 0.00 0.00 0.00 4.02
3669 7861 2.028130 ACAAACGCAGGAAATGGTGAA 58.972 42.857 0.00 0.00 0.00 3.18
3670 7862 2.428890 ACAAACGCAGGAAATGGTGAAA 59.571 40.909 0.00 0.00 0.00 2.69
3671 7863 3.069443 ACAAACGCAGGAAATGGTGAAAT 59.931 39.130 0.00 0.00 0.00 2.17
3672 7864 3.302365 AACGCAGGAAATGGTGAAATG 57.698 42.857 0.00 0.00 0.00 2.32
3673 7865 2.238521 ACGCAGGAAATGGTGAAATGT 58.761 42.857 0.00 0.00 0.00 2.71
3674 7866 2.627699 ACGCAGGAAATGGTGAAATGTT 59.372 40.909 0.00 0.00 0.00 2.71
3675 7867 3.244976 CGCAGGAAATGGTGAAATGTTC 58.755 45.455 0.00 0.00 0.00 3.18
3676 7868 3.057315 CGCAGGAAATGGTGAAATGTTCT 60.057 43.478 0.00 0.00 0.00 3.01
3677 7869 4.488879 GCAGGAAATGGTGAAATGTTCTC 58.511 43.478 0.00 0.00 0.00 2.87
3678 7870 4.726416 CAGGAAATGGTGAAATGTTCTCG 58.274 43.478 0.00 0.00 0.00 4.04
3679 7871 4.455533 CAGGAAATGGTGAAATGTTCTCGA 59.544 41.667 0.00 0.00 0.00 4.04
3680 7872 4.455877 AGGAAATGGTGAAATGTTCTCGAC 59.544 41.667 0.00 0.00 0.00 4.20
3681 7873 4.455877 GGAAATGGTGAAATGTTCTCGACT 59.544 41.667 0.00 0.00 0.00 4.18
3682 7874 5.362556 AAATGGTGAAATGTTCTCGACTG 57.637 39.130 0.00 0.00 0.00 3.51
3683 7875 3.469008 TGGTGAAATGTTCTCGACTGT 57.531 42.857 0.00 0.00 0.00 3.55
3684 7876 3.804036 TGGTGAAATGTTCTCGACTGTT 58.196 40.909 0.00 0.00 0.00 3.16
3685 7877 4.951254 TGGTGAAATGTTCTCGACTGTTA 58.049 39.130 0.00 0.00 0.00 2.41
3686 7878 5.547465 TGGTGAAATGTTCTCGACTGTTAT 58.453 37.500 0.00 0.00 0.00 1.89
3687 7879 6.693466 TGGTGAAATGTTCTCGACTGTTATA 58.307 36.000 0.00 0.00 0.00 0.98
3688 7880 7.327975 TGGTGAAATGTTCTCGACTGTTATAT 58.672 34.615 0.00 0.00 0.00 0.86
3689 7881 7.822334 TGGTGAAATGTTCTCGACTGTTATATT 59.178 33.333 0.00 0.00 0.00 1.28
3690 7882 8.328864 GGTGAAATGTTCTCGACTGTTATATTC 58.671 37.037 0.00 0.00 0.00 1.75
3691 7883 8.869897 GTGAAATGTTCTCGACTGTTATATTCA 58.130 33.333 0.00 0.00 0.00 2.57
3692 7884 9.087424 TGAAATGTTCTCGACTGTTATATTCAG 57.913 33.333 6.19 6.19 38.68 3.02
3693 7885 7.470289 AATGTTCTCGACTGTTATATTCAGC 57.530 36.000 7.29 0.00 36.50 4.26
3694 7886 5.961272 TGTTCTCGACTGTTATATTCAGCA 58.039 37.500 7.29 0.00 36.50 4.41
3695 7887 6.394809 TGTTCTCGACTGTTATATTCAGCAA 58.605 36.000 7.29 0.00 36.50 3.91
3696 7888 6.871492 TGTTCTCGACTGTTATATTCAGCAAA 59.129 34.615 7.29 0.00 36.50 3.68
3697 7889 6.887376 TCTCGACTGTTATATTCAGCAAAC 57.113 37.500 7.29 0.00 36.50 2.93
3698 7890 6.394809 TCTCGACTGTTATATTCAGCAAACA 58.605 36.000 7.29 0.00 36.50 2.83
3699 7891 6.871492 TCTCGACTGTTATATTCAGCAAACAA 59.129 34.615 7.29 0.00 36.50 2.83
3700 7892 7.386573 TCTCGACTGTTATATTCAGCAAACAAA 59.613 33.333 7.29 0.00 36.50 2.83
3701 7893 7.295201 TCGACTGTTATATTCAGCAAACAAAC 58.705 34.615 7.29 0.00 36.50 2.93
3702 7894 6.246332 CGACTGTTATATTCAGCAAACAAACG 59.754 38.462 7.29 0.00 36.50 3.60
3703 7895 5.856455 ACTGTTATATTCAGCAAACAAACGC 59.144 36.000 7.29 0.00 36.50 4.84
3704 7896 5.763088 TGTTATATTCAGCAAACAAACGCA 58.237 33.333 0.00 0.00 0.00 5.24
3705 7897 5.855925 TGTTATATTCAGCAAACAAACGCAG 59.144 36.000 0.00 0.00 0.00 5.18
3706 7898 2.138596 ATTCAGCAAACAAACGCAGG 57.861 45.000 0.00 0.00 0.00 4.85
3707 7899 1.098869 TTCAGCAAACAAACGCAGGA 58.901 45.000 0.00 0.00 0.00 3.86
3708 7900 1.098869 TCAGCAAACAAACGCAGGAA 58.901 45.000 0.00 0.00 0.00 3.36
3709 7901 1.199624 CAGCAAACAAACGCAGGAAC 58.800 50.000 0.00 0.00 0.00 3.62
3710 7902 0.814457 AGCAAACAAACGCAGGAACA 59.186 45.000 0.00 0.00 0.00 3.18
3711 7903 1.408702 AGCAAACAAACGCAGGAACAT 59.591 42.857 0.00 0.00 0.00 2.71
3712 7904 2.621055 AGCAAACAAACGCAGGAACATA 59.379 40.909 0.00 0.00 0.00 2.29
3713 7905 3.067461 AGCAAACAAACGCAGGAACATAA 59.933 39.130 0.00 0.00 0.00 1.90
3714 7906 3.987220 GCAAACAAACGCAGGAACATAAT 59.013 39.130 0.00 0.00 0.00 1.28
3715 7907 5.048364 AGCAAACAAACGCAGGAACATAATA 60.048 36.000 0.00 0.00 0.00 0.98
3716 7908 5.060446 GCAAACAAACGCAGGAACATAATAC 59.940 40.000 0.00 0.00 0.00 1.89
3717 7909 6.378582 CAAACAAACGCAGGAACATAATACT 58.621 36.000 0.00 0.00 0.00 2.12
3718 7910 5.545658 ACAAACGCAGGAACATAATACTG 57.454 39.130 0.00 0.00 0.00 2.74
3737 7929 4.854361 CTGCTTACAGTGCTATGTTCAG 57.146 45.455 0.00 3.06 39.22 3.02
3738 7930 4.248859 CTGCTTACAGTGCTATGTTCAGT 58.751 43.478 0.00 0.00 39.22 3.41
3739 7931 3.996363 TGCTTACAGTGCTATGTTCAGTG 59.004 43.478 0.00 0.00 39.94 3.66
3740 7932 3.997021 GCTTACAGTGCTATGTTCAGTGT 59.003 43.478 8.30 8.30 46.39 3.55
3741 7933 4.452455 GCTTACAGTGCTATGTTCAGTGTT 59.548 41.667 8.50 0.00 43.37 3.32
3742 7934 5.637810 GCTTACAGTGCTATGTTCAGTGTTA 59.362 40.000 8.50 0.27 43.37 2.41
3743 7935 6.313905 GCTTACAGTGCTATGTTCAGTGTTAT 59.686 38.462 8.50 0.00 43.37 1.89
3744 7936 7.595311 TTACAGTGCTATGTTCAGTGTTATG 57.405 36.000 8.50 0.00 43.37 1.90
3745 7937 5.551233 ACAGTGCTATGTTCAGTGTTATGT 58.449 37.500 0.00 0.00 43.37 2.29
3746 7938 5.997746 ACAGTGCTATGTTCAGTGTTATGTT 59.002 36.000 0.00 0.00 43.37 2.71
3747 7939 6.147821 ACAGTGCTATGTTCAGTGTTATGTTC 59.852 38.462 0.00 0.00 43.37 3.18
3748 7940 6.369890 CAGTGCTATGTTCAGTGTTATGTTCT 59.630 38.462 0.00 0.00 31.91 3.01
3749 7941 6.369890 AGTGCTATGTTCAGTGTTATGTTCTG 59.630 38.462 0.00 0.00 0.00 3.02
3750 7942 6.368791 GTGCTATGTTCAGTGTTATGTTCTGA 59.631 38.462 0.00 0.00 36.59 3.27
3751 7943 6.934083 TGCTATGTTCAGTGTTATGTTCTGAA 59.066 34.615 0.00 0.00 43.09 3.02
3772 7964 4.317671 ACATAAATACTCCCTCCGTTCG 57.682 45.455 0.00 0.00 0.00 3.95
3773 7965 3.069158 ACATAAATACTCCCTCCGTTCGG 59.931 47.826 4.74 4.74 0.00 4.30
3776 7968 2.083628 ATACTCCCTCCGTTCGGAAT 57.916 50.000 14.79 2.14 33.41 3.01
3779 7971 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
3786 7978 3.841643 TCCGTTCGGAATTACTTGTCTC 58.158 45.455 11.66 0.00 0.00 3.36
3787 7979 2.597305 CCGTTCGGAATTACTTGTCTCG 59.403 50.000 5.19 0.00 0.00 4.04
3788 7980 3.495193 CGTTCGGAATTACTTGTCTCGA 58.505 45.455 0.00 0.00 0.00 4.04
3801 8017 9.862371 ATTACTTGTCTCGAATATGGATGTATC 57.138 33.333 0.00 0.00 0.00 2.24
3806 8022 8.863872 TGTCTCGAATATGGATGTATCTAGAA 57.136 34.615 0.00 0.00 0.00 2.10
3807 8023 8.731605 TGTCTCGAATATGGATGTATCTAGAAC 58.268 37.037 0.00 0.00 0.00 3.01
3843 8093 4.813161 AGATACATCCATTTCTGCGACAAG 59.187 41.667 0.00 0.00 0.00 3.16
3846 8096 4.323417 ACATCCATTTCTGCGACAAGTAA 58.677 39.130 0.00 0.00 0.00 2.24
3849 8099 5.545658 TCCATTTCTGCGACAAGTAATTC 57.454 39.130 0.00 0.00 0.00 2.17
3850 8100 4.394920 TCCATTTCTGCGACAAGTAATTCC 59.605 41.667 0.00 0.00 0.00 3.01
3865 8115 2.083628 ATTCCGAACGGAGGGAGTAT 57.916 50.000 15.34 3.38 46.06 2.12
3868 8118 3.017048 TCCGAACGGAGGGAGTATTTA 57.983 47.619 12.04 0.00 39.76 1.40
3869 8119 2.954318 TCCGAACGGAGGGAGTATTTAG 59.046 50.000 12.04 0.00 39.76 1.85
3870 8120 2.035576 CCGAACGGAGGGAGTATTTAGG 59.964 54.545 7.53 0.00 37.50 2.69
3884 8152 5.713807 AGTATTTAGGAACGGAGGGAGTAT 58.286 41.667 0.00 0.00 0.00 2.12
3898 8166 3.827302 AGGGAGTATATAACACTGGAGCG 59.173 47.826 0.00 0.00 0.00 5.03
3902 8170 5.183331 GGAGTATATAACACTGGAGCGATGA 59.817 44.000 0.00 0.00 0.00 2.92
3906 8174 8.803235 AGTATATAACACTGGAGCGATGATAAA 58.197 33.333 0.00 0.00 0.00 1.40
3907 8175 9.587772 GTATATAACACTGGAGCGATGATAAAT 57.412 33.333 0.00 0.00 0.00 1.40
3909 8177 7.807977 ATAACACTGGAGCGATGATAAATTT 57.192 32.000 0.00 0.00 0.00 1.82
3940 8208 9.701098 TTAGGAATACAAGTAACACTTACACTG 57.299 33.333 0.00 0.00 36.03 3.66
3941 8209 7.159372 AGGAATACAAGTAACACTTACACTGG 58.841 38.462 0.00 0.00 36.03 4.00
3942 8210 7.015877 AGGAATACAAGTAACACTTACACTGGA 59.984 37.037 0.00 0.00 36.03 3.86
3943 8211 7.331193 GGAATACAAGTAACACTTACACTGGAG 59.669 40.741 0.00 0.00 36.03 3.86
3944 8212 4.377897 ACAAGTAACACTTACACTGGAGC 58.622 43.478 0.00 0.00 36.03 4.70
3945 8213 4.141801 ACAAGTAACACTTACACTGGAGCA 60.142 41.667 0.00 0.00 36.03 4.26
3946 8214 3.991367 AGTAACACTTACACTGGAGCAC 58.009 45.455 0.00 0.00 38.60 4.40
3947 8215 2.256117 AACACTTACACTGGAGCACC 57.744 50.000 0.00 0.00 0.00 5.01
3951 8233 2.301870 CACTTACACTGGAGCACCCTTA 59.698 50.000 0.00 0.00 35.38 2.69
3954 8236 0.766674 ACACTGGAGCACCCTTACCA 60.767 55.000 0.00 0.00 35.38 3.25
3969 8251 6.432783 CACCCTTACCATAATCTGTGAAAACA 59.567 38.462 0.00 0.00 0.00 2.83
3978 8260 0.657312 CTGTGAAAACAGACGCAGCA 59.343 50.000 0.00 0.00 39.99 4.41
3981 8263 1.330521 GTGAAAACAGACGCAGCAGAA 59.669 47.619 0.00 0.00 0.00 3.02
3982 8264 2.031682 GTGAAAACAGACGCAGCAGAAT 60.032 45.455 0.00 0.00 0.00 2.40
4035 8489 5.977725 CAGAGTCAACTAAAACGAGAGACAA 59.022 40.000 0.00 0.00 31.75 3.18
4039 8493 4.506654 TCAACTAAAACGAGAGACAACAGC 59.493 41.667 0.00 0.00 0.00 4.40
4050 8504 2.622942 GAGACAACAGCCCATTTTGTGA 59.377 45.455 0.00 0.00 33.59 3.58
4051 8505 2.624838 AGACAACAGCCCATTTTGTGAG 59.375 45.455 0.00 0.00 33.59 3.51
4052 8506 1.688197 ACAACAGCCCATTTTGTGAGG 59.312 47.619 0.00 0.00 32.21 3.86
4053 8507 1.962807 CAACAGCCCATTTTGTGAGGA 59.037 47.619 0.00 0.00 0.00 3.71
4054 8508 2.364970 CAACAGCCCATTTTGTGAGGAA 59.635 45.455 0.00 0.00 0.00 3.36
4055 8509 2.893424 ACAGCCCATTTTGTGAGGAAT 58.107 42.857 0.00 0.00 0.00 3.01
4056 8510 2.564062 ACAGCCCATTTTGTGAGGAATG 59.436 45.455 0.00 0.00 33.97 2.67
4057 8511 1.551883 AGCCCATTTTGTGAGGAATGC 59.448 47.619 0.00 0.00 33.08 3.56
4058 8512 1.275856 GCCCATTTTGTGAGGAATGCA 59.724 47.619 0.00 0.00 33.08 3.96
4059 8513 2.093341 GCCCATTTTGTGAGGAATGCAT 60.093 45.455 0.00 0.00 33.08 3.96
4060 8514 3.788937 CCCATTTTGTGAGGAATGCATC 58.211 45.455 0.00 0.00 33.08 3.91
4073 8527 5.343307 GGAATGCATCCCAGTTTTTATGT 57.657 39.130 0.00 0.00 43.00 2.29
4074 8528 5.111293 GGAATGCATCCCAGTTTTTATGTG 58.889 41.667 0.00 0.00 43.00 3.21
4077 8531 2.735126 GCATCCCAGTTTTTATGTGCCG 60.735 50.000 0.00 0.00 0.00 5.69
4131 8585 5.630121 TCTTGATTCTTTTCCCAGCAAGTA 58.370 37.500 0.00 0.00 34.48 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.691797 TGTTCTTGCCTGAACTTTTTATAACTT 58.308 29.630 16.34 0.00 44.63 2.66
1 2 8.232913 TGTTCTTGCCTGAACTTTTTATAACT 57.767 30.769 16.34 0.00 44.63 2.24
20 21 7.039270 GGGTTAATTGTGTTTGACTTGTTCTT 58.961 34.615 0.00 0.00 0.00 2.52
75 76 2.208431 GCTGAAGCTATGCACACCTAG 58.792 52.381 0.00 0.00 38.21 3.02
100 101 9.887406 CCAATTATCTTTTAACACGTACAAAGT 57.113 29.630 0.00 0.00 0.00 2.66
105 106 7.804129 TGTTGCCAATTATCTTTTAACACGTAC 59.196 33.333 0.00 0.00 0.00 3.67
109 110 8.359060 TGTTGTTGCCAATTATCTTTTAACAC 57.641 30.769 0.00 0.00 32.11 3.32
113 114 8.363390 TGTCATGTTGTTGCCAATTATCTTTTA 58.637 29.630 0.00 0.00 32.11 1.52
115 116 6.646240 GTGTCATGTTGTTGCCAATTATCTTT 59.354 34.615 0.00 0.00 32.11 2.52
118 119 5.574055 CAGTGTCATGTTGTTGCCAATTATC 59.426 40.000 0.00 0.00 32.11 1.75
122 123 2.957680 TCAGTGTCATGTTGTTGCCAAT 59.042 40.909 0.00 0.00 32.11 3.16
123 124 2.098934 GTCAGTGTCATGTTGTTGCCAA 59.901 45.455 0.00 0.00 0.00 4.52
125 126 1.949525 AGTCAGTGTCATGTTGTTGCC 59.050 47.619 0.00 0.00 0.00 4.52
127 128 5.928264 TCATCTAGTCAGTGTCATGTTGTTG 59.072 40.000 0.00 0.00 0.00 3.33
128 129 6.101650 TCATCTAGTCAGTGTCATGTTGTT 57.898 37.500 0.00 0.00 0.00 2.83
129 130 5.728637 TCATCTAGTCAGTGTCATGTTGT 57.271 39.130 0.00 0.00 0.00 3.32
131 132 6.352016 ACTTCATCTAGTCAGTGTCATGTT 57.648 37.500 0.00 0.00 0.00 2.71
153 154 6.588373 CAGAAGTCTTGTCCTAGCTTTCTAAC 59.412 42.308 0.00 0.00 0.00 2.34
174 175 2.092484 TGATCGCATGATTTCCCCAGAA 60.092 45.455 0.00 0.00 34.09 3.02
190 191 0.866427 CATGCAAGCTAGCCTGATCG 59.134 55.000 17.65 0.02 32.74 3.69
196 197 1.362717 CATGCCATGCAAGCTAGCC 59.637 57.895 12.13 0.00 43.62 3.93
219 220 1.601419 CCCATCACTTGCCTTGGCAG 61.601 60.000 14.33 11.08 0.00 4.85
227 228 1.442526 CTCGGCATCCCATCACTTGC 61.443 60.000 0.00 0.00 0.00 4.01
228 229 0.178767 TCTCGGCATCCCATCACTTG 59.821 55.000 0.00 0.00 0.00 3.16
252 260 5.048782 TGTTTATGCTGCTCAAACCTAGTTG 60.049 40.000 19.60 0.00 32.42 3.16
297 306 8.964150 TGATCGAATAATGTGTTGTAACTATCG 58.036 33.333 0.00 0.00 0.00 2.92
310 319 4.699735 TGCAGTTGGTTGATCGAATAATGT 59.300 37.500 0.00 0.00 0.00 2.71
317 326 1.511850 CAGTGCAGTTGGTTGATCGA 58.488 50.000 0.00 0.00 0.00 3.59
319 328 1.609208 ACCAGTGCAGTTGGTTGATC 58.391 50.000 15.39 0.00 46.57 2.92
326 335 3.935203 CCTATAAGTGACCAGTGCAGTTG 59.065 47.826 0.00 0.00 31.76 3.16
327 336 3.838317 TCCTATAAGTGACCAGTGCAGTT 59.162 43.478 0.00 0.00 33.73 3.16
329 338 3.449018 ACTCCTATAAGTGACCAGTGCAG 59.551 47.826 0.00 0.00 0.00 4.41
330 339 3.441101 ACTCCTATAAGTGACCAGTGCA 58.559 45.455 0.00 0.00 0.00 4.57
333 342 6.912426 TGATCTACTCCTATAAGTGACCAGT 58.088 40.000 0.00 0.00 0.00 4.00
334 343 9.173021 CTATGATCTACTCCTATAAGTGACCAG 57.827 40.741 0.00 0.00 0.00 4.00
335 344 8.670490 ACTATGATCTACTCCTATAAGTGACCA 58.330 37.037 0.00 0.00 0.00 4.02
346 355 9.482175 AGTTTCTTGTAACTATGATCTACTCCT 57.518 33.333 0.00 0.00 36.62 3.69
375 384 2.161012 CAGCAGTAAGTGGTCATTGCAG 59.839 50.000 0.00 0.00 33.38 4.41
389 398 7.331026 ACAATTAGAAACAGCTATCAGCAGTA 58.669 34.615 0.38 0.00 45.56 2.74
409 785 9.920946 ATGTCTGGAATAGGTGTAATTACAATT 57.079 29.630 19.63 15.24 38.04 2.32
411 787 8.544622 TCATGTCTGGAATAGGTGTAATTACAA 58.455 33.333 19.63 5.43 38.04 2.41
416 792 9.950496 GATTATCATGTCTGGAATAGGTGTAAT 57.050 33.333 0.00 0.00 0.00 1.89
472 851 4.412528 GGAGGTACATGAAGGGGTTCTTAT 59.587 45.833 0.00 0.00 35.50 1.73
486 865 3.110705 AGAAGAGCATGTGGAGGTACAT 58.889 45.455 0.00 0.00 41.77 2.29
487 866 2.497675 GAGAAGAGCATGTGGAGGTACA 59.502 50.000 0.00 0.00 34.63 2.90
489 868 2.111384 GGAGAAGAGCATGTGGAGGTA 58.889 52.381 0.00 0.00 0.00 3.08
506 885 5.229469 GTCGATACACGTACTTGATTTGGAG 59.771 44.000 6.33 0.00 43.13 3.86
532 911 6.603237 TTTACATTCCATCATCGATGTCAC 57.397 37.500 24.09 0.00 38.28 3.67
539 918 9.225201 CAGTTTTACATTTACATTCCATCATCG 57.775 33.333 0.00 0.00 0.00 3.84
555 934 7.453752 TGACCTCTTCTACTACCAGTTTTACAT 59.546 37.037 0.00 0.00 0.00 2.29
568 947 9.261035 TCAATCTTTAATCTGACCTCTTCTACT 57.739 33.333 0.00 0.00 0.00 2.57
569 948 9.308318 GTCAATCTTTAATCTGACCTCTTCTAC 57.692 37.037 0.00 0.00 33.57 2.59
625 1004 6.851609 TGCACATCCACTGTAATTTATTCAC 58.148 36.000 0.00 0.00 35.91 3.18
626 1005 7.040132 TGTTGCACATCCACTGTAATTTATTCA 60.040 33.333 0.00 0.00 35.91 2.57
647 1026 1.154035 GCTGGTATTGGCGTGTTGC 60.154 57.895 0.00 0.00 45.38 4.17
651 1030 3.206150 AGAATTAGCTGGTATTGGCGTG 58.794 45.455 0.00 0.00 0.00 5.34
677 1056 6.505044 TCATTGATGTCAGAGTCAATTTGG 57.495 37.500 7.84 0.57 41.70 3.28
687 4814 8.626526 CAATTACATTCCATCATTGATGTCAGA 58.373 33.333 21.95 11.63 38.28 3.27
733 4860 5.352293 GGGGTGTTAATACTTAAACCTGACG 59.648 44.000 2.17 0.00 32.13 4.35
739 4866 9.198837 CACAAATTGGGGTGTTAATACTTAAAC 57.801 33.333 2.17 0.00 0.00 2.01
740 4867 7.873505 GCACAAATTGGGGTGTTAATACTTAAA 59.126 33.333 0.00 0.00 37.35 1.52
755 4882 2.364970 TGACTTCCAAGCACAAATTGGG 59.635 45.455 4.97 0.00 46.03 4.12
808 4940 2.438021 AGGATTAGCTGGTATTGGCGAA 59.562 45.455 0.00 0.00 0.00 4.70
811 4943 3.565902 GTCAAGGATTAGCTGGTATTGGC 59.434 47.826 0.00 0.00 0.00 4.52
835 4967 7.010830 GGTCGTTACTGATGAAAATAAGGTACC 59.989 40.741 2.73 2.73 0.00 3.34
837 4969 7.613585 TGGTCGTTACTGATGAAAATAAGGTA 58.386 34.615 0.00 0.00 0.00 3.08
839 4971 6.037172 CCTGGTCGTTACTGATGAAAATAAGG 59.963 42.308 0.00 0.00 0.00 2.69
840 4972 6.816640 TCCTGGTCGTTACTGATGAAAATAAG 59.183 38.462 0.00 0.00 0.00 1.73
843 4975 5.160607 TCCTGGTCGTTACTGATGAAAAT 57.839 39.130 0.00 0.00 0.00 1.82
853 4985 3.536956 TTGATCCATCCTGGTCGTTAC 57.463 47.619 0.00 0.00 39.03 2.50
864 4996 5.185635 TGGTCTCCATTTTGTTTGATCCATC 59.814 40.000 0.00 0.00 0.00 3.51
866 5000 4.478203 TGGTCTCCATTTTGTTTGATCCA 58.522 39.130 0.00 0.00 0.00 3.41
898 5032 5.595133 AGATAGAGTAACCGAGGAAAGGAAG 59.405 44.000 0.00 0.00 0.00 3.46
929 5063 6.595716 GTCTGCCATGATGAAGTACTAGTTTT 59.404 38.462 0.00 0.00 0.00 2.43
946 5082 1.821136 GCTTAAGCTTTGGTCTGCCAT 59.179 47.619 20.38 0.00 40.47 4.40
969 5105 4.327627 GCGAGAAGTTAGCTTGGAAACTAG 59.672 45.833 0.00 0.00 34.91 2.57
992 5128 4.177026 ACTGAGTAGCTGCATAGTTTTCG 58.823 43.478 4.12 0.00 0.00 3.46
999 5135 5.737349 GCATAAGTGACTGAGTAGCTGCATA 60.737 44.000 4.12 0.00 0.00 3.14
1019 5155 0.254462 TGGCAATCGGTTCCTGCATA 59.746 50.000 0.00 0.00 37.83 3.14
1021 5157 0.611618 ATTGGCAATCGGTTCCTGCA 60.612 50.000 6.96 0.00 37.83 4.41
1022 5158 1.065551 GTATTGGCAATCGGTTCCTGC 59.934 52.381 17.41 0.00 35.28 4.85
1194 5330 2.240918 AATCCCCTCCCAGCTGCAA 61.241 57.895 8.66 0.00 0.00 4.08
1273 5412 1.303309 CCAAGGAATGGCGAGATGAC 58.697 55.000 0.00 0.00 43.80 3.06
1274 5413 3.786656 CCAAGGAATGGCGAGATGA 57.213 52.632 0.00 0.00 43.80 2.92
1393 5532 3.815401 CCTCTCAAACGGTTGAAACTGAT 59.185 43.478 18.03 0.00 43.18 2.90
1407 5546 0.037882 CGTGCAGAGCTCCTCTCAAA 60.038 55.000 10.93 0.00 44.35 2.69
1802 5941 6.471146 AGATTTCTGAGGCTTATTATGCGAT 58.529 36.000 0.00 0.00 0.00 4.58
1829 5968 4.402616 TTCCACCCAAGATCAAGGATTT 57.597 40.909 5.11 0.00 0.00 2.17
1887 6026 3.118445 GGAACTCCTCCAATCTCTTGAGG 60.118 52.174 0.00 0.00 44.67 3.86
1917 6056 1.418637 TCCCCTGACAGGTTGTTGTAC 59.581 52.381 20.24 0.00 31.93 2.90
2165 6304 5.663106 AGATACTTCAGGTTGCCTATTCTCA 59.337 40.000 0.00 0.00 29.64 3.27
2286 6425 3.389329 TGAGCTCTCCTCTGAAGTTGTTT 59.611 43.478 16.19 0.00 41.35 2.83
2324 6463 5.947566 TGAAGATTCTCAAAGCCATCAATCA 59.052 36.000 0.00 0.00 0.00 2.57
2350 6489 4.099633 TGGCAACCATCCATATCCAAAAA 58.900 39.130 0.00 0.00 0.00 1.94
2554 6693 5.010922 AGTTGCCAGTTGATTTTAGCATTGA 59.989 36.000 0.00 0.00 0.00 2.57
2851 7002 2.259266 TGCAGATTGTTCAGTGCAGA 57.741 45.000 0.00 0.00 40.93 4.26
3052 7203 2.420022 CGAAGGCCACCTTGTAATCAAG 59.580 50.000 5.01 1.53 44.82 3.02
3053 7204 2.432444 CGAAGGCCACCTTGTAATCAA 58.568 47.619 5.01 0.00 44.82 2.57
3141 7292 3.010138 TGGACTAGCACTAGCCCAAATTT 59.990 43.478 9.98 0.00 41.71 1.82
3142 7293 2.576191 TGGACTAGCACTAGCCCAAATT 59.424 45.455 9.98 0.00 41.71 1.82
3143 7294 2.196595 TGGACTAGCACTAGCCCAAAT 58.803 47.619 9.98 0.00 41.71 2.32
3144 7295 1.651737 TGGACTAGCACTAGCCCAAA 58.348 50.000 9.98 0.00 41.71 3.28
3145 7296 3.392066 TGGACTAGCACTAGCCCAA 57.608 52.632 9.98 0.00 41.71 4.12
3146 7297 1.486310 CATTGGACTAGCACTAGCCCA 59.514 52.381 8.49 8.49 42.72 5.36
3147 7298 1.486726 ACATTGGACTAGCACTAGCCC 59.513 52.381 3.26 3.26 43.56 5.19
3155 7306 7.495934 ACAAACAGATACATACATTGGACTAGC 59.504 37.037 0.00 0.00 0.00 3.42
3169 7324 6.993786 TCAAAGTTGACACAAACAGATACA 57.006 33.333 0.00 0.00 32.21 2.29
3180 7335 4.520492 ACCCAATCTGATCAAAGTTGACAC 59.480 41.667 13.16 0.00 40.49 3.67
3200 7356 3.692690 TGGTAAACCTGAATAGCAACCC 58.307 45.455 0.02 0.00 36.82 4.11
3219 7375 5.305585 ACTTACTGTTACTGGACATGTTGG 58.694 41.667 0.00 0.00 0.00 3.77
3235 7394 5.889289 ACCTAGAGGAGAAGCTTACTTACTG 59.111 44.000 0.00 0.00 35.80 2.74
3236 7395 6.082228 ACCTAGAGGAGAAGCTTACTTACT 57.918 41.667 0.00 0.00 35.80 2.24
3237 7396 6.018016 CGTACCTAGAGGAGAAGCTTACTTAC 60.018 46.154 0.00 0.00 35.80 2.34
3238 7397 6.054295 CGTACCTAGAGGAGAAGCTTACTTA 58.946 44.000 0.00 0.00 35.80 2.24
3239 7398 4.883006 CGTACCTAGAGGAGAAGCTTACTT 59.117 45.833 0.00 0.00 37.47 2.24
3240 7399 4.163839 TCGTACCTAGAGGAGAAGCTTACT 59.836 45.833 0.00 0.00 38.94 2.24
3241 7400 4.450053 TCGTACCTAGAGGAGAAGCTTAC 58.550 47.826 0.00 0.00 38.94 2.34
3305 7464 9.174166 ACTGTCCCATATTATTACACACTTTTC 57.826 33.333 0.00 0.00 0.00 2.29
3312 7497 8.952278 TGTTTGAACTGTCCCATATTATTACAC 58.048 33.333 0.00 0.00 0.00 2.90
3320 7505 5.126061 GCTTCATGTTTGAACTGTCCCATAT 59.874 40.000 0.00 0.00 36.94 1.78
3322 7507 3.256631 GCTTCATGTTTGAACTGTCCCAT 59.743 43.478 0.00 0.00 36.94 4.00
3333 7518 6.753279 CCCTGTACAATATTGCTTCATGTTTG 59.247 38.462 15.48 1.27 0.00 2.93
3338 7523 7.397192 AGTTTTCCCTGTACAATATTGCTTCAT 59.603 33.333 15.48 0.00 0.00 2.57
3350 7541 4.163458 AGAGTGTTGAGTTTTCCCTGTACA 59.837 41.667 0.00 0.00 0.00 2.90
3351 7542 4.704965 AGAGTGTTGAGTTTTCCCTGTAC 58.295 43.478 0.00 0.00 0.00 2.90
3356 7547 5.011227 AGAGTCTAGAGTGTTGAGTTTTCCC 59.989 44.000 4.36 0.00 0.00 3.97
3357 7548 5.923684 CAGAGTCTAGAGTGTTGAGTTTTCC 59.076 44.000 4.36 0.00 0.00 3.13
3360 7551 5.361285 ACACAGAGTCTAGAGTGTTGAGTTT 59.639 40.000 4.36 0.00 42.06 2.66
3363 7554 6.205853 AGTTACACAGAGTCTAGAGTGTTGAG 59.794 42.308 17.58 10.99 42.06 3.02
3365 7556 6.205853 AGAGTTACACAGAGTCTAGAGTGTTG 59.794 42.308 17.58 12.16 42.06 3.33
3366 7557 6.300703 AGAGTTACACAGAGTCTAGAGTGTT 58.699 40.000 17.58 3.79 42.06 3.32
3374 7565 9.444600 TGTTTTAAAAAGAGTTACACAGAGTCT 57.555 29.630 1.31 0.00 0.00 3.24
3406 7598 8.546597 AATGGTGAAATTAAAGTTACAATGGC 57.453 30.769 0.00 0.00 0.00 4.40
3448 7640 7.066887 CACCATGGTAAGCAGTATTGTTCAATA 59.933 37.037 19.28 1.68 0.00 1.90
3462 7654 2.099756 GGAGCATTTCACCATGGTAAGC 59.900 50.000 19.28 16.34 34.98 3.09
3464 7656 3.620488 GAGGAGCATTTCACCATGGTAA 58.380 45.455 19.28 10.11 34.98 2.85
3466 7658 1.341383 GGAGGAGCATTTCACCATGGT 60.341 52.381 13.00 13.00 37.59 3.55
3468 7660 2.133281 TGGAGGAGCATTTCACCATG 57.867 50.000 0.00 0.00 31.85 3.66
3470 7662 2.905415 AATGGAGGAGCATTTCACCA 57.095 45.000 0.00 0.00 37.88 4.17
3471 7663 3.091545 TGAAATGGAGGAGCATTTCACC 58.908 45.455 5.65 0.00 46.50 4.02
3474 7666 2.756760 TGCTGAAATGGAGGAGCATTTC 59.243 45.455 2.26 2.26 43.97 2.17
3475 7667 2.811410 TGCTGAAATGGAGGAGCATTT 58.189 42.857 0.00 0.00 36.54 2.32
3476 7668 2.519771 TGCTGAAATGGAGGAGCATT 57.480 45.000 0.00 0.00 36.54 3.56
3477 7669 2.494870 GTTTGCTGAAATGGAGGAGCAT 59.505 45.455 0.00 0.00 40.97 3.79
3478 7670 1.888512 GTTTGCTGAAATGGAGGAGCA 59.111 47.619 0.00 0.00 39.66 4.26
3479 7671 1.888512 TGTTTGCTGAAATGGAGGAGC 59.111 47.619 0.00 0.00 0.00 4.70
3480 7672 4.301628 GTTTGTTTGCTGAAATGGAGGAG 58.698 43.478 0.00 0.00 0.00 3.69
3481 7673 3.243367 CGTTTGTTTGCTGAAATGGAGGA 60.243 43.478 0.00 0.00 0.00 3.71
3482 7674 3.052036 CGTTTGTTTGCTGAAATGGAGG 58.948 45.455 0.00 0.00 0.00 4.30
3483 7675 2.472488 GCGTTTGTTTGCTGAAATGGAG 59.528 45.455 0.00 0.00 0.00 3.86
3484 7676 2.159184 TGCGTTTGTTTGCTGAAATGGA 60.159 40.909 0.00 0.00 0.00 3.41
3485 7677 2.200067 TGCGTTTGTTTGCTGAAATGG 58.800 42.857 0.00 0.00 0.00 3.16
3486 7678 2.219216 CCTGCGTTTGTTTGCTGAAATG 59.781 45.455 0.00 0.00 32.47 2.32
3487 7679 2.100584 TCCTGCGTTTGTTTGCTGAAAT 59.899 40.909 0.00 0.00 32.47 2.17
3488 7680 1.474478 TCCTGCGTTTGTTTGCTGAAA 59.526 42.857 0.00 0.00 32.47 2.69
3489 7681 1.098869 TCCTGCGTTTGTTTGCTGAA 58.901 45.000 0.00 0.00 32.47 3.02
3490 7682 1.098869 TTCCTGCGTTTGTTTGCTGA 58.901 45.000 0.00 0.00 32.47 4.26
3491 7683 1.919918 TTTCCTGCGTTTGTTTGCTG 58.080 45.000 0.00 0.00 0.00 4.41
3492 7684 2.100584 TCATTTCCTGCGTTTGTTTGCT 59.899 40.909 0.00 0.00 0.00 3.91
3493 7685 2.468831 TCATTTCCTGCGTTTGTTTGC 58.531 42.857 0.00 0.00 0.00 3.68
3494 7686 4.297510 TCATCATTTCCTGCGTTTGTTTG 58.702 39.130 0.00 0.00 0.00 2.93
3495 7687 4.582701 TCATCATTTCCTGCGTTTGTTT 57.417 36.364 0.00 0.00 0.00 2.83
3496 7688 4.582701 TTCATCATTTCCTGCGTTTGTT 57.417 36.364 0.00 0.00 0.00 2.83
3497 7689 4.582701 TTTCATCATTTCCTGCGTTTGT 57.417 36.364 0.00 0.00 0.00 2.83
3498 7690 4.925054 ACATTTCATCATTTCCTGCGTTTG 59.075 37.500 0.00 0.00 0.00 2.93
3499 7691 5.138125 ACATTTCATCATTTCCTGCGTTT 57.862 34.783 0.00 0.00 0.00 3.60
3500 7692 4.789012 ACATTTCATCATTTCCTGCGTT 57.211 36.364 0.00 0.00 0.00 4.84
3501 7693 4.460382 AGAACATTTCATCATTTCCTGCGT 59.540 37.500 0.00 0.00 0.00 5.24
3502 7694 4.990257 AGAACATTTCATCATTTCCTGCG 58.010 39.130 0.00 0.00 0.00 5.18
3503 7695 5.032863 CGAGAACATTTCATCATTTCCTGC 58.967 41.667 0.00 0.00 0.00 4.85
3504 7696 6.093219 AGTCGAGAACATTTCATCATTTCCTG 59.907 38.462 0.00 0.00 0.00 3.86
3505 7697 6.093219 CAGTCGAGAACATTTCATCATTTCCT 59.907 38.462 0.00 0.00 0.00 3.36
3506 7698 6.128172 ACAGTCGAGAACATTTCATCATTTCC 60.128 38.462 0.00 0.00 0.00 3.13
3507 7699 6.835914 ACAGTCGAGAACATTTCATCATTTC 58.164 36.000 0.00 0.00 0.00 2.17
3508 7700 6.808008 ACAGTCGAGAACATTTCATCATTT 57.192 33.333 0.00 0.00 0.00 2.32
3509 7701 6.808008 AACAGTCGAGAACATTTCATCATT 57.192 33.333 0.00 0.00 0.00 2.57
3510 7702 9.770097 ATATAACAGTCGAGAACATTTCATCAT 57.230 29.630 0.00 0.00 0.00 2.45
3511 7703 9.599866 AATATAACAGTCGAGAACATTTCATCA 57.400 29.630 0.00 0.00 0.00 3.07
3513 7705 9.599866 TGAATATAACAGTCGAGAACATTTCAT 57.400 29.630 0.00 0.00 0.00 2.57
3514 7706 8.996024 TGAATATAACAGTCGAGAACATTTCA 57.004 30.769 0.00 0.00 0.00 2.69
3515 7707 8.058915 GCTGAATATAACAGTCGAGAACATTTC 58.941 37.037 10.23 0.00 37.64 2.17
3516 7708 7.549134 TGCTGAATATAACAGTCGAGAACATTT 59.451 33.333 10.23 0.00 37.64 2.32
3517 7709 7.041721 TGCTGAATATAACAGTCGAGAACATT 58.958 34.615 10.23 0.00 37.64 2.71
3518 7710 6.573434 TGCTGAATATAACAGTCGAGAACAT 58.427 36.000 10.23 0.00 37.64 2.71
3519 7711 5.961272 TGCTGAATATAACAGTCGAGAACA 58.039 37.500 10.23 0.00 37.64 3.18
3520 7712 6.887376 TTGCTGAATATAACAGTCGAGAAC 57.113 37.500 10.23 0.00 37.64 3.01
3521 7713 6.871492 TGTTTGCTGAATATAACAGTCGAGAA 59.129 34.615 10.23 0.10 37.64 2.87
3522 7714 6.394809 TGTTTGCTGAATATAACAGTCGAGA 58.605 36.000 10.23 0.00 37.64 4.04
3523 7715 6.647212 TGTTTGCTGAATATAACAGTCGAG 57.353 37.500 10.23 0.00 37.64 4.04
3524 7716 6.649141 ACTTGTTTGCTGAATATAACAGTCGA 59.351 34.615 10.23 0.00 37.64 4.20
3525 7717 6.738200 CACTTGTTTGCTGAATATAACAGTCG 59.262 38.462 10.23 0.00 37.64 4.18
3526 7718 7.584987 ACACTTGTTTGCTGAATATAACAGTC 58.415 34.615 10.23 5.22 37.64 3.51
3527 7719 7.510549 ACACTTGTTTGCTGAATATAACAGT 57.489 32.000 10.23 0.00 37.64 3.55
3529 7721 9.838975 CATAACACTTGTTTGCTGAATATAACA 57.161 29.630 0.00 0.00 39.31 2.41
3530 7722 9.840427 ACATAACACTTGTTTGCTGAATATAAC 57.160 29.630 0.00 0.00 39.31 1.89
3533 7725 9.762933 AAAACATAACACTTGTTTGCTGAATAT 57.237 25.926 0.00 0.00 44.32 1.28
3534 7726 9.029243 CAAAACATAACACTTGTTTGCTGAATA 57.971 29.630 0.00 0.00 44.32 1.75
3535 7727 7.548780 ACAAAACATAACACTTGTTTGCTGAAT 59.451 29.630 0.00 0.00 44.32 2.57
3536 7728 6.870965 ACAAAACATAACACTTGTTTGCTGAA 59.129 30.769 0.00 0.00 44.32 3.02
3537 7729 6.393990 ACAAAACATAACACTTGTTTGCTGA 58.606 32.000 0.00 0.00 44.32 4.26
3538 7730 6.645700 ACAAAACATAACACTTGTTTGCTG 57.354 33.333 0.00 2.08 44.32 4.41
3539 7731 8.816144 CATAACAAAACATAACACTTGTTTGCT 58.184 29.630 0.00 0.00 44.32 3.91
3540 7732 8.599774 ACATAACAAAACATAACACTTGTTTGC 58.400 29.630 0.00 0.00 44.32 3.68
3544 7736 9.515020 CAGAACATAACAAAACATAACACTTGT 57.485 29.630 0.00 0.00 33.51 3.16
3545 7737 9.515020 ACAGAACATAACAAAACATAACACTTG 57.485 29.630 0.00 0.00 0.00 3.16
3559 7751 8.717821 GCTGAATACAAGTAACAGAACATAACA 58.282 33.333 16.26 0.00 0.00 2.41
3560 7752 8.717821 TGCTGAATACAAGTAACAGAACATAAC 58.282 33.333 16.26 3.89 0.00 1.89
3561 7753 8.840833 TGCTGAATACAAGTAACAGAACATAA 57.159 30.769 16.26 0.04 0.00 1.90
3562 7754 8.840833 TTGCTGAATACAAGTAACAGAACATA 57.159 30.769 16.26 0.00 0.00 2.29
3563 7755 7.744087 TTGCTGAATACAAGTAACAGAACAT 57.256 32.000 16.26 0.00 0.00 2.71
3564 7756 7.066404 TGTTTGCTGAATACAAGTAACAGAACA 59.934 33.333 16.26 14.89 0.00 3.18
3565 7757 7.414436 TGTTTGCTGAATACAAGTAACAGAAC 58.586 34.615 16.26 13.39 0.00 3.01
3566 7758 7.561021 TGTTTGCTGAATACAAGTAACAGAA 57.439 32.000 16.26 7.68 0.00 3.02
3567 7759 7.561021 TTGTTTGCTGAATACAAGTAACAGA 57.439 32.000 16.26 4.96 0.00 3.41
3568 7760 7.842525 CTTGTTTGCTGAATACAAGTAACAG 57.157 36.000 9.95 10.98 42.24 3.16
3575 7767 6.127758 ACTGAACACTTGTTTGCTGAATACAA 60.128 34.615 0.00 0.00 38.56 2.41
3576 7768 5.356751 ACTGAACACTTGTTTGCTGAATACA 59.643 36.000 0.00 0.00 38.56 2.29
3577 7769 5.682862 CACTGAACACTTGTTTGCTGAATAC 59.317 40.000 0.00 0.00 38.56 1.89
3578 7770 5.356751 ACACTGAACACTTGTTTGCTGAATA 59.643 36.000 0.00 0.00 38.56 1.75
3579 7771 4.158394 ACACTGAACACTTGTTTGCTGAAT 59.842 37.500 0.00 0.00 38.56 2.57
3580 7772 3.505680 ACACTGAACACTTGTTTGCTGAA 59.494 39.130 0.00 0.00 38.56 3.02
3581 7773 3.081061 ACACTGAACACTTGTTTGCTGA 58.919 40.909 0.00 0.00 38.56 4.26
3582 7774 3.492421 ACACTGAACACTTGTTTGCTG 57.508 42.857 0.00 0.00 38.56 4.41
3583 7775 5.125417 ACATAACACTGAACACTTGTTTGCT 59.875 36.000 0.00 0.00 38.56 3.91
3584 7776 5.339990 ACATAACACTGAACACTTGTTTGC 58.660 37.500 0.00 0.00 38.56 3.68
3585 7777 8.181573 AGTAACATAACACTGAACACTTGTTTG 58.818 33.333 0.00 0.00 38.56 2.93
3586 7778 8.276252 AGTAACATAACACTGAACACTTGTTT 57.724 30.769 0.00 0.00 38.56 2.83
3587 7779 7.859325 AGTAACATAACACTGAACACTTGTT 57.141 32.000 0.00 0.00 41.64 2.83
3588 7780 7.335924 ACAAGTAACATAACACTGAACACTTGT 59.664 33.333 9.74 9.74 45.13 3.16
3589 7781 7.693952 ACAAGTAACATAACACTGAACACTTG 58.306 34.615 8.61 8.61 43.61 3.16
3590 7782 7.859325 ACAAGTAACATAACACTGAACACTT 57.141 32.000 0.00 0.00 0.00 3.16
3591 7783 9.555727 AATACAAGTAACATAACACTGAACACT 57.444 29.630 0.00 0.00 0.00 3.55
3592 7784 9.807386 GAATACAAGTAACATAACACTGAACAC 57.193 33.333 0.00 0.00 0.00 3.32
3593 7785 8.995220 GGAATACAAGTAACATAACACTGAACA 58.005 33.333 0.00 0.00 0.00 3.18
3594 7786 9.216117 AGGAATACAAGTAACATAACACTGAAC 57.784 33.333 0.00 0.00 0.00 3.18
3609 7801 9.209175 GAGCGATGAATATTTAGGAATACAAGT 57.791 33.333 0.00 0.00 30.87 3.16
3610 7802 8.660373 GGAGCGATGAATATTTAGGAATACAAG 58.340 37.037 0.00 0.00 30.87 3.16
3611 7803 8.154203 TGGAGCGATGAATATTTAGGAATACAA 58.846 33.333 0.00 0.00 30.87 2.41
3612 7804 7.676004 TGGAGCGATGAATATTTAGGAATACA 58.324 34.615 0.00 0.00 30.87 2.29
3613 7805 7.819900 ACTGGAGCGATGAATATTTAGGAATAC 59.180 37.037 0.00 0.00 30.87 1.89
3614 7806 7.819415 CACTGGAGCGATGAATATTTAGGAATA 59.181 37.037 0.00 0.00 32.56 1.75
3615 7807 6.652481 CACTGGAGCGATGAATATTTAGGAAT 59.348 38.462 0.00 0.00 0.00 3.01
3616 7808 5.991606 CACTGGAGCGATGAATATTTAGGAA 59.008 40.000 0.00 0.00 0.00 3.36
3617 7809 5.070446 ACACTGGAGCGATGAATATTTAGGA 59.930 40.000 0.00 0.00 0.00 2.94
3618 7810 5.300752 ACACTGGAGCGATGAATATTTAGG 58.699 41.667 0.00 0.00 0.00 2.69
3619 7811 6.851222 AACACTGGAGCGATGAATATTTAG 57.149 37.500 0.00 0.00 0.00 1.85
3620 7812 7.722363 TCTAACACTGGAGCGATGAATATTTA 58.278 34.615 0.00 0.00 0.00 1.40
3621 7813 6.582636 TCTAACACTGGAGCGATGAATATTT 58.417 36.000 0.00 0.00 0.00 1.40
3622 7814 6.161855 TCTAACACTGGAGCGATGAATATT 57.838 37.500 0.00 0.00 0.00 1.28
3623 7815 5.791336 TCTAACACTGGAGCGATGAATAT 57.209 39.130 0.00 0.00 0.00 1.28
3624 7816 5.791336 ATCTAACACTGGAGCGATGAATA 57.209 39.130 0.00 0.00 0.00 1.75
3625 7817 4.679373 ATCTAACACTGGAGCGATGAAT 57.321 40.909 0.00 0.00 0.00 2.57
3626 7818 5.592104 TTATCTAACACTGGAGCGATGAA 57.408 39.130 0.00 0.00 0.00 2.57
3627 7819 5.105513 TGTTTATCTAACACTGGAGCGATGA 60.106 40.000 0.00 0.00 41.73 2.92
3628 7820 5.109210 TGTTTATCTAACACTGGAGCGATG 58.891 41.667 0.00 0.00 41.73 3.84
3629 7821 5.339008 TGTTTATCTAACACTGGAGCGAT 57.661 39.130 0.00 0.00 41.73 4.58
3630 7822 4.794278 TGTTTATCTAACACTGGAGCGA 57.206 40.909 0.00 0.00 41.73 4.93
3631 7823 5.618561 GTTTGTTTATCTAACACTGGAGCG 58.381 41.667 0.00 0.00 46.09 5.03
3632 7824 5.618561 CGTTTGTTTATCTAACACTGGAGC 58.381 41.667 0.00 0.00 46.09 4.70
3633 7825 5.178623 TGCGTTTGTTTATCTAACACTGGAG 59.821 40.000 0.00 0.00 46.09 3.86
3634 7826 5.057819 TGCGTTTGTTTATCTAACACTGGA 58.942 37.500 0.00 0.00 46.09 3.86
3635 7827 5.351233 TGCGTTTGTTTATCTAACACTGG 57.649 39.130 0.00 0.00 46.09 4.00
3636 7828 5.178623 TCCTGCGTTTGTTTATCTAACACTG 59.821 40.000 0.00 0.00 46.09 3.66
3637 7829 5.302360 TCCTGCGTTTGTTTATCTAACACT 58.698 37.500 0.00 0.00 46.09 3.55
3638 7830 5.600908 TCCTGCGTTTGTTTATCTAACAC 57.399 39.130 0.00 0.00 46.09 3.32
3639 7831 6.621316 TTTCCTGCGTTTGTTTATCTAACA 57.379 33.333 0.00 0.00 44.81 2.41
3640 7832 6.526674 CCATTTCCTGCGTTTGTTTATCTAAC 59.473 38.462 0.00 0.00 37.26 2.34
3641 7833 6.207810 ACCATTTCCTGCGTTTGTTTATCTAA 59.792 34.615 0.00 0.00 0.00 2.10
3642 7834 5.708230 ACCATTTCCTGCGTTTGTTTATCTA 59.292 36.000 0.00 0.00 0.00 1.98
3643 7835 4.522789 ACCATTTCCTGCGTTTGTTTATCT 59.477 37.500 0.00 0.00 0.00 1.98
3644 7836 4.621034 CACCATTTCCTGCGTTTGTTTATC 59.379 41.667 0.00 0.00 0.00 1.75
3645 7837 4.279671 TCACCATTTCCTGCGTTTGTTTAT 59.720 37.500 0.00 0.00 0.00 1.40
3646 7838 3.632604 TCACCATTTCCTGCGTTTGTTTA 59.367 39.130 0.00 0.00 0.00 2.01
3647 7839 2.428890 TCACCATTTCCTGCGTTTGTTT 59.571 40.909 0.00 0.00 0.00 2.83
3648 7840 2.028130 TCACCATTTCCTGCGTTTGTT 58.972 42.857 0.00 0.00 0.00 2.83
3649 7841 1.686355 TCACCATTTCCTGCGTTTGT 58.314 45.000 0.00 0.00 0.00 2.83
3650 7842 2.791383 TTCACCATTTCCTGCGTTTG 57.209 45.000 0.00 0.00 0.00 2.93
3651 7843 3.069443 ACATTTCACCATTTCCTGCGTTT 59.931 39.130 0.00 0.00 0.00 3.60
3652 7844 2.627699 ACATTTCACCATTTCCTGCGTT 59.372 40.909 0.00 0.00 0.00 4.84
3653 7845 2.238521 ACATTTCACCATTTCCTGCGT 58.761 42.857 0.00 0.00 0.00 5.24
3654 7846 3.057315 AGAACATTTCACCATTTCCTGCG 60.057 43.478 0.00 0.00 0.00 5.18
3655 7847 4.488879 GAGAACATTTCACCATTTCCTGC 58.511 43.478 0.00 0.00 0.00 4.85
3656 7848 4.455533 TCGAGAACATTTCACCATTTCCTG 59.544 41.667 0.00 0.00 0.00 3.86
3657 7849 4.455877 GTCGAGAACATTTCACCATTTCCT 59.544 41.667 0.00 0.00 0.00 3.36
3658 7850 4.455877 AGTCGAGAACATTTCACCATTTCC 59.544 41.667 0.00 0.00 0.00 3.13
3659 7851 5.049405 ACAGTCGAGAACATTTCACCATTTC 60.049 40.000 0.00 0.00 0.00 2.17
3660 7852 4.821805 ACAGTCGAGAACATTTCACCATTT 59.178 37.500 0.00 0.00 0.00 2.32
3661 7853 4.389374 ACAGTCGAGAACATTTCACCATT 58.611 39.130 0.00 0.00 0.00 3.16
3662 7854 4.008074 ACAGTCGAGAACATTTCACCAT 57.992 40.909 0.00 0.00 0.00 3.55
3663 7855 3.469008 ACAGTCGAGAACATTTCACCA 57.531 42.857 0.00 0.00 0.00 4.17
3664 7856 7.772332 ATATAACAGTCGAGAACATTTCACC 57.228 36.000 0.00 0.00 0.00 4.02
3665 7857 8.869897 TGAATATAACAGTCGAGAACATTTCAC 58.130 33.333 0.00 0.00 0.00 3.18
3666 7858 8.996024 TGAATATAACAGTCGAGAACATTTCA 57.004 30.769 0.00 0.00 0.00 2.69
3667 7859 8.058915 GCTGAATATAACAGTCGAGAACATTTC 58.941 37.037 10.23 0.00 37.64 2.17
3668 7860 7.549134 TGCTGAATATAACAGTCGAGAACATTT 59.451 33.333 10.23 0.00 37.64 2.32
3669 7861 7.041721 TGCTGAATATAACAGTCGAGAACATT 58.958 34.615 10.23 0.00 37.64 2.71
3670 7862 6.573434 TGCTGAATATAACAGTCGAGAACAT 58.427 36.000 10.23 0.00 37.64 2.71
3671 7863 5.961272 TGCTGAATATAACAGTCGAGAACA 58.039 37.500 10.23 0.00 37.64 3.18
3672 7864 6.887376 TTGCTGAATATAACAGTCGAGAAC 57.113 37.500 10.23 0.00 37.64 3.01
3673 7865 6.871492 TGTTTGCTGAATATAACAGTCGAGAA 59.129 34.615 10.23 0.10 37.64 2.87
3674 7866 6.394809 TGTTTGCTGAATATAACAGTCGAGA 58.605 36.000 10.23 0.00 37.64 4.04
3675 7867 6.647212 TGTTTGCTGAATATAACAGTCGAG 57.353 37.500 10.23 0.00 37.64 4.04
3676 7868 7.295201 GTTTGTTTGCTGAATATAACAGTCGA 58.705 34.615 10.23 0.00 37.64 4.20
3677 7869 6.246332 CGTTTGTTTGCTGAATATAACAGTCG 59.754 38.462 10.23 0.00 37.64 4.18
3678 7870 6.032460 GCGTTTGTTTGCTGAATATAACAGTC 59.968 38.462 10.23 5.22 37.64 3.51
3679 7871 5.856455 GCGTTTGTTTGCTGAATATAACAGT 59.144 36.000 10.23 0.00 37.64 3.55
3680 7872 5.855925 TGCGTTTGTTTGCTGAATATAACAG 59.144 36.000 5.73 5.73 38.27 3.16
3681 7873 5.763088 TGCGTTTGTTTGCTGAATATAACA 58.237 33.333 0.00 0.00 0.00 2.41
3682 7874 5.286082 CCTGCGTTTGTTTGCTGAATATAAC 59.714 40.000 0.00 0.00 32.47 1.89
3683 7875 5.182190 TCCTGCGTTTGTTTGCTGAATATAA 59.818 36.000 0.00 0.00 32.47 0.98
3684 7876 4.697828 TCCTGCGTTTGTTTGCTGAATATA 59.302 37.500 0.00 0.00 32.47 0.86
3685 7877 3.505680 TCCTGCGTTTGTTTGCTGAATAT 59.494 39.130 0.00 0.00 32.47 1.28
3686 7878 2.881513 TCCTGCGTTTGTTTGCTGAATA 59.118 40.909 0.00 0.00 32.47 1.75
3687 7879 1.680735 TCCTGCGTTTGTTTGCTGAAT 59.319 42.857 0.00 0.00 32.47 2.57
3688 7880 1.098869 TCCTGCGTTTGTTTGCTGAA 58.901 45.000 0.00 0.00 32.47 3.02
3689 7881 1.098869 TTCCTGCGTTTGTTTGCTGA 58.901 45.000 0.00 0.00 32.47 4.26
3690 7882 1.199624 GTTCCTGCGTTTGTTTGCTG 58.800 50.000 0.00 0.00 0.00 4.41
3691 7883 0.814457 TGTTCCTGCGTTTGTTTGCT 59.186 45.000 0.00 0.00 0.00 3.91
3692 7884 1.851658 ATGTTCCTGCGTTTGTTTGC 58.148 45.000 0.00 0.00 0.00 3.68
3693 7885 6.305399 CAGTATTATGTTCCTGCGTTTGTTTG 59.695 38.462 0.00 0.00 0.00 2.93
3694 7886 6.378582 CAGTATTATGTTCCTGCGTTTGTTT 58.621 36.000 0.00 0.00 0.00 2.83
3695 7887 5.619086 GCAGTATTATGTTCCTGCGTTTGTT 60.619 40.000 0.00 0.00 40.67 2.83
3696 7888 4.142687 GCAGTATTATGTTCCTGCGTTTGT 60.143 41.667 0.00 0.00 40.67 2.83
3697 7889 4.342772 GCAGTATTATGTTCCTGCGTTTG 58.657 43.478 0.00 0.00 40.67 2.93
3698 7890 4.616181 GCAGTATTATGTTCCTGCGTTT 57.384 40.909 0.00 0.00 40.67 3.60
3717 7909 3.996363 CACTGAACATAGCACTGTAAGCA 59.004 43.478 0.00 0.00 37.60 3.91
3718 7910 3.997021 ACACTGAACATAGCACTGTAAGC 59.003 43.478 0.00 0.00 37.60 3.09
3719 7911 7.331934 ACATAACACTGAACATAGCACTGTAAG 59.668 37.037 0.00 0.00 42.29 2.34
3720 7912 7.158697 ACATAACACTGAACATAGCACTGTAA 58.841 34.615 0.00 0.00 0.00 2.41
3721 7913 6.697395 ACATAACACTGAACATAGCACTGTA 58.303 36.000 0.00 0.00 0.00 2.74
3722 7914 5.551233 ACATAACACTGAACATAGCACTGT 58.449 37.500 0.00 0.00 0.00 3.55
3723 7915 6.369890 AGAACATAACACTGAACATAGCACTG 59.630 38.462 0.00 0.00 0.00 3.66
3724 7916 6.369890 CAGAACATAACACTGAACATAGCACT 59.630 38.462 0.00 0.00 34.07 4.40
3725 7917 6.368791 TCAGAACATAACACTGAACATAGCAC 59.631 38.462 0.00 0.00 37.66 4.40
3726 7918 6.463360 TCAGAACATAACACTGAACATAGCA 58.537 36.000 0.00 0.00 37.66 3.49
3727 7919 6.968131 TCAGAACATAACACTGAACATAGC 57.032 37.500 0.00 0.00 37.66 2.97
3743 7935 6.629515 CGGAGGGAGTATTTATGTTCAGAACA 60.630 42.308 18.42 18.42 46.94 3.18
3744 7936 5.753921 CGGAGGGAGTATTTATGTTCAGAAC 59.246 44.000 6.32 6.32 0.00 3.01
3745 7937 5.424252 ACGGAGGGAGTATTTATGTTCAGAA 59.576 40.000 0.00 0.00 0.00 3.02
3746 7938 4.960469 ACGGAGGGAGTATTTATGTTCAGA 59.040 41.667 0.00 0.00 0.00 3.27
3747 7939 5.277857 ACGGAGGGAGTATTTATGTTCAG 57.722 43.478 0.00 0.00 0.00 3.02
3748 7940 5.667466 GAACGGAGGGAGTATTTATGTTCA 58.333 41.667 0.00 0.00 34.77 3.18
3749 7941 4.743644 CGAACGGAGGGAGTATTTATGTTC 59.256 45.833 0.00 0.00 0.00 3.18
3750 7942 4.442472 CCGAACGGAGGGAGTATTTATGTT 60.442 45.833 7.53 0.00 37.50 2.71
3751 7943 3.069158 CCGAACGGAGGGAGTATTTATGT 59.931 47.826 7.53 0.00 37.50 2.29
3752 7944 3.319972 TCCGAACGGAGGGAGTATTTATG 59.680 47.826 12.04 0.00 39.76 1.90
3753 7945 3.569491 TCCGAACGGAGGGAGTATTTAT 58.431 45.455 12.04 0.00 39.76 1.40
3754 7946 3.017048 TCCGAACGGAGGGAGTATTTA 57.983 47.619 12.04 0.00 39.76 1.40
3757 7949 2.083628 ATTCCGAACGGAGGGAGTAT 57.916 50.000 15.34 3.38 46.06 2.12
3772 7964 7.657761 ACATCCATATTCGAGACAAGTAATTCC 59.342 37.037 0.00 0.00 0.00 3.01
3773 7965 8.594881 ACATCCATATTCGAGACAAGTAATTC 57.405 34.615 0.00 0.00 0.00 2.17
3776 7968 9.078990 AGATACATCCATATTCGAGACAAGTAA 57.921 33.333 0.00 0.00 0.00 2.24
3779 7971 8.951243 TCTAGATACATCCATATTCGAGACAAG 58.049 37.037 0.00 0.00 0.00 3.16
3811 8027 9.664332 GCAGAAATGGATGTATCTAGATGTATT 57.336 33.333 15.79 4.32 0.00 1.89
3812 8028 7.978414 CGCAGAAATGGATGTATCTAGATGTAT 59.022 37.037 15.79 9.11 0.00 2.29
3815 8031 6.309980 GTCGCAGAAATGGATGTATCTAGATG 59.690 42.308 15.79 0.00 39.69 2.90
3817 8033 5.301805 TGTCGCAGAAATGGATGTATCTAGA 59.698 40.000 0.00 0.00 39.69 2.43
3818 8034 5.532557 TGTCGCAGAAATGGATGTATCTAG 58.467 41.667 0.00 0.00 39.69 2.43
3819 8035 5.529581 TGTCGCAGAAATGGATGTATCTA 57.470 39.130 0.00 0.00 39.69 1.98
3820 8036 4.406648 TGTCGCAGAAATGGATGTATCT 57.593 40.909 0.00 0.00 39.69 1.98
3821 8037 4.572389 ACTTGTCGCAGAAATGGATGTATC 59.428 41.667 0.00 0.00 39.69 2.24
3822 8038 4.517285 ACTTGTCGCAGAAATGGATGTAT 58.483 39.130 0.00 0.00 39.69 2.29
3823 8039 3.937814 ACTTGTCGCAGAAATGGATGTA 58.062 40.909 0.00 0.00 39.69 2.29
3824 8040 2.783135 ACTTGTCGCAGAAATGGATGT 58.217 42.857 0.00 0.00 39.69 3.06
3825 8041 4.944962 TTACTTGTCGCAGAAATGGATG 57.055 40.909 0.00 0.00 39.69 3.51
3826 8042 5.066505 GGAATTACTTGTCGCAGAAATGGAT 59.933 40.000 0.00 0.00 39.69 3.41
3827 8043 4.394920 GGAATTACTTGTCGCAGAAATGGA 59.605 41.667 0.00 0.00 39.69 3.41
3829 8045 4.092821 TCGGAATTACTTGTCGCAGAAATG 59.907 41.667 0.00 0.00 39.69 2.32
3830 8046 4.250464 TCGGAATTACTTGTCGCAGAAAT 58.750 39.130 0.00 0.00 39.69 2.17
3831 8047 3.655486 TCGGAATTACTTGTCGCAGAAA 58.345 40.909 0.00 0.00 39.69 2.52
3834 8050 2.222508 CGTTCGGAATTACTTGTCGCAG 60.223 50.000 0.00 0.00 0.00 5.18
3843 8093 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
3846 8096 2.083628 ATACTCCCTCCGTTCGGAAT 57.916 50.000 14.79 2.14 33.41 3.01
3849 8099 2.035576 CCTAAATACTCCCTCCGTTCGG 59.964 54.545 4.74 4.74 0.00 4.30
3850 8100 2.954318 TCCTAAATACTCCCTCCGTTCG 59.046 50.000 0.00 0.00 0.00 3.95
3865 8115 7.014615 GTGTTATATACTCCCTCCGTTCCTAAA 59.985 40.741 0.00 0.00 0.00 1.85
3868 8118 4.831710 GTGTTATATACTCCCTCCGTTCCT 59.168 45.833 0.00 0.00 0.00 3.36
3869 8119 4.831710 AGTGTTATATACTCCCTCCGTTCC 59.168 45.833 0.00 0.00 0.00 3.62
3870 8120 5.278858 CCAGTGTTATATACTCCCTCCGTTC 60.279 48.000 0.00 0.00 0.00 3.95
3884 8152 8.902540 AAATTTATCATCGCTCCAGTGTTATA 57.097 30.769 0.00 0.00 0.00 0.98
3919 8187 6.649557 GCTCCAGTGTAAGTGTTACTTGTATT 59.350 38.462 4.56 0.00 39.11 1.89
3924 8192 4.377897 GTGCTCCAGTGTAAGTGTTACTT 58.622 43.478 0.00 0.00 41.97 2.24
3935 8203 0.766674 TGGTAAGGGTGCTCCAGTGT 60.767 55.000 7.20 0.00 38.24 3.55
3936 8204 0.620556 ATGGTAAGGGTGCTCCAGTG 59.379 55.000 7.20 0.00 38.24 3.66
3937 8205 2.263895 TATGGTAAGGGTGCTCCAGT 57.736 50.000 7.20 0.00 38.24 4.00
3938 8206 3.392616 AGATTATGGTAAGGGTGCTCCAG 59.607 47.826 7.20 0.00 38.24 3.86
3939 8207 3.136443 CAGATTATGGTAAGGGTGCTCCA 59.864 47.826 7.20 0.00 38.24 3.86
3940 8208 3.136626 ACAGATTATGGTAAGGGTGCTCC 59.863 47.826 0.00 0.00 0.00 4.70
3941 8209 4.130118 CACAGATTATGGTAAGGGTGCTC 58.870 47.826 0.00 0.00 0.00 4.26
3942 8210 3.780294 TCACAGATTATGGTAAGGGTGCT 59.220 43.478 0.00 0.00 0.00 4.40
3943 8211 4.150897 TCACAGATTATGGTAAGGGTGC 57.849 45.455 0.00 0.00 0.00 5.01
3944 8212 6.432783 TGTTTTCACAGATTATGGTAAGGGTG 59.567 38.462 0.00 0.00 0.00 4.61
3945 8213 6.548321 TGTTTTCACAGATTATGGTAAGGGT 58.452 36.000 0.00 0.00 0.00 4.34
3969 8251 0.035317 TTGGACATTCTGCTGCGTCT 59.965 50.000 0.00 0.00 0.00 4.18
3999 8453 2.479566 TGACTCTGACAAGATTGGGC 57.520 50.000 0.00 0.00 0.00 5.36
4001 8455 7.355778 GTTTTAGTTGACTCTGACAAGATTGG 58.644 38.462 0.00 0.00 0.00 3.16
4035 8489 2.380064 TTCCTCACAAAATGGGCTGT 57.620 45.000 0.00 0.00 0.00 4.40
4039 8493 3.431207 GGATGCATTCCTCACAAAATGGG 60.431 47.826 0.00 0.00 41.78 4.00
4050 8504 5.025453 ACATAAAAACTGGGATGCATTCCT 58.975 37.500 24.83 6.00 44.75 3.36
4051 8505 5.111293 CACATAAAAACTGGGATGCATTCC 58.889 41.667 18.06 18.06 44.62 3.01
4052 8506 4.567959 GCACATAAAAACTGGGATGCATTC 59.432 41.667 0.00 0.00 0.00 2.67
4053 8507 4.506758 GCACATAAAAACTGGGATGCATT 58.493 39.130 0.00 0.00 0.00 3.56
4054 8508 3.118665 GGCACATAAAAACTGGGATGCAT 60.119 43.478 0.00 0.00 33.48 3.96
4055 8509 2.233431 GGCACATAAAAACTGGGATGCA 59.767 45.455 0.00 0.00 33.48 3.96
4056 8510 2.735126 CGGCACATAAAAACTGGGATGC 60.735 50.000 0.00 0.00 0.00 3.91
4057 8511 2.159254 CCGGCACATAAAAACTGGGATG 60.159 50.000 0.00 0.00 0.00 3.51
4058 8512 2.099405 CCGGCACATAAAAACTGGGAT 58.901 47.619 0.00 0.00 0.00 3.85
4059 8513 1.540267 CCGGCACATAAAAACTGGGA 58.460 50.000 0.00 0.00 0.00 4.37
4060 8514 0.108851 GCCGGCACATAAAAACTGGG 60.109 55.000 24.80 0.00 0.00 4.45
4061 8515 0.455972 CGCCGGCACATAAAAACTGG 60.456 55.000 28.98 0.12 0.00 4.00
4062 8516 0.519519 TCGCCGGCACATAAAAACTG 59.480 50.000 28.98 5.10 0.00 3.16
4063 8517 0.519961 GTCGCCGGCACATAAAAACT 59.480 50.000 28.98 0.00 0.00 2.66
4064 8518 0.791610 CGTCGCCGGCACATAAAAAC 60.792 55.000 28.98 9.40 0.00 2.43
4065 8519 1.498166 CGTCGCCGGCACATAAAAA 59.502 52.632 28.98 0.00 0.00 1.94
4066 8520 3.029564 GCGTCGCCGGCACATAAAA 62.030 57.895 28.98 0.00 33.68 1.52
4067 8521 3.492545 GCGTCGCCGGCACATAAA 61.493 61.111 28.98 0.35 33.68 1.40
4068 8522 4.743975 TGCGTCGCCGGCACATAA 62.744 61.111 28.98 5.52 35.04 1.90
4074 8528 4.520846 CAAATCTGCGTCGCCGGC 62.521 66.667 19.07 19.07 33.68 6.13
4077 8531 1.348594 GCTACAAATCTGCGTCGCC 59.651 57.895 15.88 0.00 0.00 5.54
4105 8559 5.395682 TGCTGGGAAAAGAATCAAGAATG 57.604 39.130 0.00 0.00 0.00 2.67
4131 8585 2.031508 CCAAGGTACGTCGTGCAAATTT 60.032 45.455 15.45 1.56 0.00 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.