Multiple sequence alignment - TraesCS6A01G123700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G123700 chr6A 100.000 9016 0 0 1 9016 97809253 97800238 0.000000e+00 16650.0
1 TraesCS6A01G123700 chr6A 93.529 170 9 1 6566 6735 48520040 48520207 1.500000e-62 252.0
2 TraesCS6A01G123700 chr6A 85.345 116 14 3 5151 5264 97802495 97802381 5.720000e-22 117.0
3 TraesCS6A01G123700 chr6A 85.345 116 14 3 6759 6873 97804103 97803990 5.720000e-22 117.0
4 TraesCS6A01G123700 chr6A 85.841 113 9 5 6342 6449 497792403 497792513 7.400000e-21 113.0
5 TraesCS6A01G123700 chr6A 96.226 53 2 0 1565 1617 97807636 97807584 4.480000e-13 87.9
6 TraesCS6A01G123700 chr6A 96.226 53 2 0 1618 1670 97807689 97807637 4.480000e-13 87.9
7 TraesCS6A01G123700 chr6A 89.552 67 4 1 137 203 97809054 97808991 2.090000e-11 82.4
8 TraesCS6A01G123700 chr6A 89.552 67 4 1 200 263 97809117 97809051 2.090000e-11 82.4
9 TraesCS6A01G123700 chr6A 91.667 48 4 0 2542 2589 613108064 613108017 5.840000e-07 67.6
10 TraesCS6A01G123700 chr6A 97.222 36 1 0 2554 2589 23609036 23609001 2.720000e-05 62.1
11 TraesCS6A01G123700 chr6A 97.059 34 1 0 2556 2589 580159671 580159704 3.520000e-04 58.4
12 TraesCS6A01G123700 chr6A 96.970 33 1 0 7986 8018 97801236 97801204 1.000000e-03 56.5
13 TraesCS6A01G123700 chr6A 96.970 33 1 0 8018 8050 97801268 97801236 1.000000e-03 56.5
14 TraesCS6A01G123700 chr6D 95.829 2062 68 9 3362 5407 81226931 81224872 0.000000e+00 3315.0
15 TraesCS6A01G123700 chr6D 93.460 1942 77 20 757 2674 81228839 81226924 0.000000e+00 2837.0
16 TraesCS6A01G123700 chr6D 94.348 1327 34 9 6729 8018 81223507 81222185 0.000000e+00 1997.0
17 TraesCS6A01G123700 chr6D 92.461 955 36 7 5538 6472 81224678 81223740 0.000000e+00 1332.0
18 TraesCS6A01G123700 chr6D 93.581 701 24 8 8018 8701 81222217 81221521 0.000000e+00 1026.0
19 TraesCS6A01G123700 chr6D 92.287 726 39 8 1 725 81231114 81230405 0.000000e+00 1014.0
20 TraesCS6A01G123700 chr6D 90.038 261 17 5 8759 9016 81219077 81218823 6.750000e-86 329.0
21 TraesCS6A01G123700 chr6D 85.821 134 18 1 6142 6274 81116264 81116131 3.390000e-29 141.0
22 TraesCS6A01G123700 chr6D 98.734 79 1 0 5461 5539 81224862 81224784 3.390000e-29 141.0
23 TraesCS6A01G123700 chr6D 92.553 94 7 0 6474 6567 81223668 81223575 1.580000e-27 135.0
24 TraesCS6A01G123700 chr6D 86.207 116 13 3 6759 6873 81225128 81225015 1.230000e-23 122.0
25 TraesCS6A01G123700 chr6D 83.088 136 15 4 8319 8452 81212492 81212363 5.720000e-22 117.0
26 TraesCS6A01G123700 chr6D 84.483 116 16 2 5150 5264 81223478 81223364 7.400000e-21 113.0
27 TraesCS6A01G123700 chr6D 92.208 77 4 2 6730 6806 81223576 81223502 3.440000e-19 108.0
28 TraesCS6A01G123700 chr6D 92.188 64 5 0 200 263 81230978 81230915 3.470000e-14 91.6
29 TraesCS6A01G123700 chr6D 92.453 53 4 0 1565 1617 81227963 81227911 9.710000e-10 76.8
30 TraesCS6A01G123700 chr6B 96.833 1484 31 4 2694 4169 155756068 155754593 0.000000e+00 2466.0
31 TraesCS6A01G123700 chr6B 93.750 1040 31 11 1618 2653 155757076 155756067 0.000000e+00 1530.0
32 TraesCS6A01G123700 chr6B 95.223 942 20 7 6730 7653 155753416 155752482 0.000000e+00 1467.0
33 TraesCS6A01G123700 chr6B 97.826 782 14 1 4282 5060 155754593 155753812 0.000000e+00 1347.0
34 TraesCS6A01G123700 chr6B 91.513 919 49 15 727 1617 155757941 155757024 0.000000e+00 1238.0
35 TraesCS6A01G123700 chr6B 92.286 700 42 5 27 725 155760080 155759392 0.000000e+00 983.0
36 TraesCS6A01G123700 chr6B 92.319 703 27 13 8018 8697 155752075 155751377 0.000000e+00 974.0
37 TraesCS6A01G123700 chr6B 98.370 368 6 0 7651 8018 155752410 155752043 0.000000e+00 647.0
38 TraesCS6A01G123700 chr6B 98.020 303 5 1 5113 5414 155753811 155753509 8.020000e-145 525.0
39 TraesCS6A01G123700 chr6B 87.597 129 15 1 6147 6274 155231991 155231863 2.030000e-31 148.0
40 TraesCS6A01G123700 chr6B 96.512 86 3 0 6482 6567 155753500 155753415 9.440000e-30 143.0
41 TraesCS6A01G123700 chr6B 85.593 118 14 3 5149 5264 155753389 155753273 4.420000e-23 121.0
42 TraesCS6A01G123700 chr6B 84.483 116 15 3 6759 6873 155753773 155753660 2.660000e-20 111.0
43 TraesCS6A01G123700 chr6B 89.062 64 7 0 200 263 155759971 155759908 7.500000e-11 80.5
44 TraesCS6A01G123700 chr2D 93.678 174 9 1 6555 6728 526524947 526525118 8.980000e-65 259.0
45 TraesCS6A01G123700 chr2D 95.833 72 3 0 5614 5685 117843037 117843108 5.720000e-22 117.0
46 TraesCS6A01G123700 chr2D 95.652 46 1 1 2544 2589 290738941 290738985 1.260000e-08 73.1
47 TraesCS6A01G123700 chr5D 93.939 165 8 1 6564 6728 322370001 322370163 1.940000e-61 248.0
48 TraesCS6A01G123700 chr5D 89.412 85 8 1 2545 2629 353482982 353483065 1.240000e-18 106.0
49 TraesCS6A01G123700 chr5D 95.122 41 2 0 2549 2589 449292799 449292839 2.100000e-06 65.8
50 TraesCS6A01G123700 chr7A 92.398 171 11 1 6563 6733 323448429 323448597 9.040000e-60 243.0
51 TraesCS6A01G123700 chr7A 92.045 176 7 4 6566 6737 580506868 580506696 3.250000e-59 241.0
52 TraesCS6A01G123700 chr2B 92.442 172 9 3 6559 6728 769077997 769078166 9.040000e-60 243.0
53 TraesCS6A01G123700 chr2B 95.833 72 3 0 5615 5686 703352934 703352863 5.720000e-22 117.0
54 TraesCS6A01G123700 chr5B 92.398 171 9 2 6564 6734 384587701 384587535 3.250000e-59 241.0
55 TraesCS6A01G123700 chr5B 84.524 84 13 0 2549 2632 548690997 548690914 5.800000e-12 84.2
56 TraesCS6A01G123700 chr5B 93.182 44 3 0 2546 2589 474466609 474466652 2.100000e-06 65.8
57 TraesCS6A01G123700 chr3B 92.353 170 11 1 6566 6735 428703660 428703827 3.250000e-59 241.0
58 TraesCS6A01G123700 chr3B 82.353 153 20 6 6302 6449 603605824 603605974 9.500000e-25 126.0
59 TraesCS6A01G123700 chr3B 95.833 72 3 0 5614 5685 662485208 662485137 5.720000e-22 117.0
60 TraesCS6A01G123700 chr3B 81.955 133 18 5 6320 6447 13188134 13188265 3.440000e-19 108.0
61 TraesCS6A01G123700 chr3B 78.808 151 25 5 6300 6449 752142908 752142764 2.680000e-15 95.3
62 TraesCS6A01G123700 chr1B 91.525 177 10 4 6563 6737 390879193 390879366 1.170000e-58 239.0
63 TraesCS6A01G123700 chr1B 83.333 120 12 6 6335 6448 13363105 13363222 4.450000e-18 104.0
64 TraesCS6A01G123700 chr1B 83.333 120 12 6 6335 6448 13385722 13385839 4.450000e-18 104.0
65 TraesCS6A01G123700 chr1B 85.714 77 10 1 2560 2635 98255024 98254948 7.500000e-11 80.5
66 TraesCS6A01G123700 chr1B 93.750 48 3 0 7140 7187 561722042 561722089 1.260000e-08 73.1
67 TraesCS6A01G123700 chr1B 100.000 29 0 0 3333 3361 540149890 540149918 5.000000e-03 54.7
68 TraesCS6A01G123700 chr3D 97.183 71 2 0 5615 5685 436676986 436676916 4.420000e-23 121.0
69 TraesCS6A01G123700 chr3D 97.101 69 2 0 5617 5685 22679144 22679076 5.720000e-22 117.0
70 TraesCS6A01G123700 chr3D 93.590 78 5 0 5608 5685 22767805 22767882 5.720000e-22 117.0
71 TraesCS6A01G123700 chr3D 97.143 35 1 0 2555 2589 135385386 135385420 9.780000e-05 60.2
72 TraesCS6A01G123700 chr7B 94.737 76 3 1 5616 5690 667453323 667453398 5.720000e-22 117.0
73 TraesCS6A01G123700 chr7B 92.683 41 3 0 2549 2589 69587517 69587477 9.780000e-05 60.2
74 TraesCS6A01G123700 chr4A 92.500 80 6 0 5606 5685 9380770 9380691 2.060000e-21 115.0
75 TraesCS6A01G123700 chr4A 85.870 92 12 1 2542 2632 565436114 565436205 7.450000e-16 97.1
76 TraesCS6A01G123700 chr1D 82.353 136 19 4 6318 6449 206961697 206961831 7.400000e-21 113.0
77 TraesCS6A01G123700 chr2A 87.912 91 11 0 2542 2632 715965686 715965596 3.440000e-19 108.0
78 TraesCS6A01G123700 chrUn 85.185 108 8 6 6347 6448 289426310 289426205 4.450000e-18 104.0
79 TraesCS6A01G123700 chr3A 86.905 84 11 0 2549 2632 74237227 74237144 2.680000e-15 95.3
80 TraesCS6A01G123700 chr4D 84.615 78 11 1 2542 2618 36837984 36837907 9.710000e-10 76.8
81 TraesCS6A01G123700 chr1A 90.566 53 4 1 2537 2589 460934465 460934516 1.620000e-07 69.4
82 TraesCS6A01G123700 chr1A 89.583 48 5 0 7140 7187 513118034 513118081 2.720000e-05 62.1
83 TraesCS6A01G123700 chr1A 92.683 41 3 0 2549 2589 241321087 241321047 9.780000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G123700 chr6A 97800238 97809253 9015 True 16650.000000 16650 100.000000 1 9016 1 chr6A.!!$R2 9015
1 TraesCS6A01G123700 chr6D 81218823 81231114 12291 True 902.671429 3315 92.202143 1 9016 14 chr6D.!!$R3 9015
2 TraesCS6A01G123700 chr6B 155751377 155760080 8703 True 894.807692 2466 93.214615 27 8697 13 chr6B.!!$R2 8670

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
216 217 0.106335 CGCCAGAAGATGATCTGCCT 59.894 55.000 0.00 0.00 44.43 4.75 F
534 536 0.380733 TCGTATGCGATGCGTCTTCT 59.619 50.000 0.30 0.00 42.81 2.85 F
637 640 0.457851 TTGGTTTCTTGTTGGCGTGG 59.542 50.000 0.00 0.00 0.00 4.94 F
1341 3071 0.680921 AGGTGGGCATGAATGAACCG 60.681 55.000 0.00 0.00 34.48 4.44 F
1456 3189 1.153489 CTGGATCTCACCGTGGCTG 60.153 63.158 0.00 0.00 0.00 4.85 F
2791 4545 0.113190 CCCCAAAGATATCCCCAGCC 59.887 60.000 0.00 0.00 0.00 4.85 F
2933 4694 0.320421 TACTGGCGAACCACTTCTGC 60.320 55.000 0.00 0.00 42.67 4.26 F
3232 4993 1.069090 GATAGACATTGCCGGCCGA 59.931 57.895 30.73 13.73 0.00 5.54 F
5009 6786 0.320697 GCTCCGTGGGTAAGTTGACT 59.679 55.000 0.00 0.00 0.00 3.41 F
5459 7239 0.034186 CCATGTGTGGTGTATGCCCT 60.034 55.000 0.00 0.00 40.83 5.19 F
6304 8211 0.310854 GTTTCTTTGGTGCAGTCGGG 59.689 55.000 0.00 0.00 0.00 5.14 F
7997 10085 0.031716 ATCTGGAGTGGCCTAGCTCA 60.032 55.000 19.06 5.79 37.63 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1547 3281 0.232303 GGTTCAGTGTTCGCAAGTCG 59.768 55.000 0.00 0.00 40.15 4.18 R
2039 3791 0.741221 CCTGGCGAGTAACTTCTGCC 60.741 60.000 0.00 0.00 45.91 4.85 R
2092 3844 0.950836 CATCTGCACACCCGAAAACA 59.049 50.000 0.00 0.00 0.00 2.83 R
2725 4479 0.108041 ACACGTGTCGTTTTCTGGGT 60.108 50.000 17.22 0.00 38.32 4.51 R
3293 5054 0.881118 CCACCCAGAAAATGACACGG 59.119 55.000 0.00 0.00 0.00 4.94 R
4721 6484 1.532868 CAGTCACCAAGTAGCAACTGC 59.467 52.381 0.00 0.00 42.49 4.40 R
4747 6510 3.143728 CATGCAATGCAGTATAGCTCCA 58.856 45.455 14.98 0.00 43.65 3.86 R
5102 6881 2.675844 TGGCATTATTCGTTCAGAACCG 59.324 45.455 7.76 3.56 42.39 4.44 R
6065 7971 1.047801 AAATATTTGCCGGCCCATCC 58.952 50.000 26.77 0.00 0.00 3.51 R
7071 9052 0.030235 ATAGCGCACATGCTTGCATG 59.970 50.000 27.64 27.64 44.46 4.06 R
8007 10095 0.105607 GCTAGCCCACCCTAGGTAGT 60.106 60.000 8.29 0.00 36.64 2.73 R
8900 13401 0.317160 TCGTGATCGGAAAGCACACT 59.683 50.000 0.00 0.00 37.69 3.55 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
91 92 1.913762 CCAGGAACTCCACCTCCGT 60.914 63.158 0.00 0.00 34.60 4.69
93 94 0.900647 CAGGAACTCCACCTCCGTCT 60.901 60.000 0.00 0.00 34.60 4.18
189 190 0.107800 CACTGACCCAGCATGAGGAG 60.108 60.000 0.00 0.00 39.69 3.69
190 191 1.270414 ACTGACCCAGCATGAGGAGG 61.270 60.000 0.00 0.00 39.69 4.30
191 192 0.979709 CTGACCCAGCATGAGGAGGA 60.980 60.000 0.00 0.00 39.69 3.71
216 217 0.106335 CGCCAGAAGATGATCTGCCT 59.894 55.000 0.00 0.00 44.43 4.75
306 307 1.191489 TCGATGACAAGTGGGCAGGA 61.191 55.000 0.00 0.00 0.00 3.86
308 309 0.393537 GATGACAAGTGGGCAGGAGG 60.394 60.000 0.00 0.00 0.00 4.30
309 310 1.136329 ATGACAAGTGGGCAGGAGGT 61.136 55.000 0.00 0.00 0.00 3.85
368 369 1.407025 GGTCTAGTGGTTGCTTAGGGC 60.407 57.143 0.00 0.00 42.22 5.19
375 376 1.583495 GGTTGCTTAGGGCGTGGAAC 61.583 60.000 0.00 0.00 45.43 3.62
403 404 6.223852 ACTGAACTGAACTGGTTGTACATAG 58.776 40.000 0.00 0.00 0.00 2.23
505 507 2.846206 TGTTAGACCTGATGATGGGCTT 59.154 45.455 0.00 0.00 40.76 4.35
534 536 0.380733 TCGTATGCGATGCGTCTTCT 59.619 50.000 0.30 0.00 42.81 2.85
627 629 5.302823 CCTTGTTTGATCTCCTTGGTTTCTT 59.697 40.000 0.00 0.00 0.00 2.52
633 636 2.306847 TCTCCTTGGTTTCTTGTTGGC 58.693 47.619 0.00 0.00 0.00 4.52
637 640 0.457851 TTGGTTTCTTGTTGGCGTGG 59.542 50.000 0.00 0.00 0.00 4.94
660 663 3.872771 TGTGTTTGTTTACTTCCTCCGTC 59.127 43.478 0.00 0.00 0.00 4.79
661 664 4.124970 GTGTTTGTTTACTTCCTCCGTCT 58.875 43.478 0.00 0.00 0.00 4.18
662 665 4.210746 GTGTTTGTTTACTTCCTCCGTCTC 59.789 45.833 0.00 0.00 0.00 3.36
663 666 4.100498 TGTTTGTTTACTTCCTCCGTCTCT 59.900 41.667 0.00 0.00 0.00 3.10
664 667 4.950205 TTGTTTACTTCCTCCGTCTCTT 57.050 40.909 0.00 0.00 0.00 2.85
665 668 4.950205 TGTTTACTTCCTCCGTCTCTTT 57.050 40.909 0.00 0.00 0.00 2.52
675 678 4.134563 CCTCCGTCTCTTTTTCTTTTGGA 58.865 43.478 0.00 0.00 0.00 3.53
676 679 4.762251 CCTCCGTCTCTTTTTCTTTTGGAT 59.238 41.667 0.00 0.00 0.00 3.41
698 701 6.295916 GGATCGTAATATCTGGGGAATGTCTT 60.296 42.308 0.00 0.00 0.00 3.01
701 704 6.015350 TCGTAATATCTGGGGAATGTCTTCTC 60.015 42.308 0.00 0.00 0.00 2.87
703 706 1.195115 TCTGGGGAATGTCTTCTCGG 58.805 55.000 0.00 0.00 32.15 4.63
710 713 1.921230 GAATGTCTTCTCGGAGCGTTC 59.079 52.381 0.00 0.30 0.00 3.95
725 766 2.931649 TTCTCCCCCGTGAACCCC 60.932 66.667 0.00 0.00 0.00 4.95
739 2455 1.067060 GAACCCCACAGCAGTGTTTTC 59.933 52.381 8.55 4.12 44.39 2.29
752 2468 1.748493 GTGTTTTCCACTGAACTGGCA 59.252 47.619 0.00 0.00 41.11 4.92
753 2469 2.023673 TGTTTTCCACTGAACTGGCAG 58.976 47.619 14.16 14.16 41.63 4.85
755 2471 3.211045 GTTTTCCACTGAACTGGCAGTA 58.789 45.455 22.37 5.10 46.80 2.74
909 2635 4.699522 GGCTCCACACCGGACCAC 62.700 72.222 9.46 0.00 39.64 4.16
964 2690 2.106683 CGATCAACCGCCACTTCCC 61.107 63.158 0.00 0.00 0.00 3.97
973 2699 3.330720 CCACTTCCCCCTCGCCTT 61.331 66.667 0.00 0.00 0.00 4.35
1227 2953 2.125512 GCCGACAAGGTGCTCGAT 60.126 61.111 0.00 0.00 43.70 3.59
1314 3044 0.757561 TAGCCTGTGCCTGCGGTATA 60.758 55.000 0.00 0.00 38.69 1.47
1341 3071 0.680921 AGGTGGGCATGAATGAACCG 60.681 55.000 0.00 0.00 34.48 4.44
1432 3165 5.427378 TCTTGTTGATCCGATGATGCTAAA 58.573 37.500 0.00 0.00 0.00 1.85
1437 3170 2.218953 TCCGATGATGCTAAACCGTC 57.781 50.000 0.00 0.00 0.00 4.79
1456 3189 1.153489 CTGGATCTCACCGTGGCTG 60.153 63.158 0.00 0.00 0.00 4.85
1542 3276 7.026631 TGACGTTTTCAGTTGAAATCAATCT 57.973 32.000 8.02 0.00 42.83 2.40
1543 3277 6.912051 TGACGTTTTCAGTTGAAATCAATCTG 59.088 34.615 8.02 14.32 42.83 2.90
1545 3279 7.257722 ACGTTTTCAGTTGAAATCAATCTGTT 58.742 30.769 8.02 0.00 42.83 3.16
1546 3280 7.220683 ACGTTTTCAGTTGAAATCAATCTGTTG 59.779 33.333 8.02 6.81 42.83 3.33
1547 3281 7.339953 GTTTTCAGTTGAAATCAATCTGTTGC 58.660 34.615 8.02 8.98 42.83 4.17
1548 3282 4.786507 TCAGTTGAAATCAATCTGTTGCG 58.213 39.130 17.35 0.00 38.24 4.85
1549 3283 4.514816 TCAGTTGAAATCAATCTGTTGCGA 59.485 37.500 17.35 4.31 38.24 5.10
1585 3333 3.233507 ACCTTGTTGTGAAATGCCATCT 58.766 40.909 0.00 0.00 0.00 2.90
1592 3340 2.821378 TGTGAAATGCCATCTTCCACAG 59.179 45.455 0.00 0.00 0.00 3.66
1597 3345 5.951148 TGAAATGCCATCTTCCACAGATTAA 59.049 36.000 0.00 0.00 40.67 1.40
1634 3382 2.622942 TGTCACCTTGTTGAGAAATGCC 59.377 45.455 0.00 0.00 0.00 4.40
1773 3521 5.410439 GCGTGAGGTTTATTTTGTCTAAGGA 59.590 40.000 0.00 0.00 0.00 3.36
1805 3555 4.762289 ACAGAAACAGTCTTTCAGAGGT 57.238 40.909 0.00 0.00 32.70 3.85
1811 3563 8.624776 CAGAAACAGTCTTTCAGAGGTAAAAAT 58.375 33.333 0.00 0.00 32.70 1.82
1889 3641 7.286546 TGGAAGTGAAATTTCTGGATTTACACA 59.713 33.333 18.64 5.49 33.91 3.72
1890 3642 7.595130 GGAAGTGAAATTTCTGGATTTACACAC 59.405 37.037 18.64 5.15 33.91 3.82
1891 3643 7.581213 AGTGAAATTTCTGGATTTACACACA 57.419 32.000 18.64 0.00 33.91 3.72
1963 3715 2.079925 GCTCTGTCTGTTTCCATGTCC 58.920 52.381 0.00 0.00 0.00 4.02
2039 3791 3.365565 GCCACTGTAACATGTTTAACCGG 60.366 47.826 17.78 13.10 0.00 5.28
2043 3795 2.814919 TGTAACATGTTTAACCGGGCAG 59.185 45.455 17.78 0.00 0.00 4.85
2055 3807 1.810030 CGGGCAGAAGTTACTCGCC 60.810 63.158 10.72 10.72 42.21 5.54
2405 4158 6.772360 TTCTTCATGGCTGTAAAATATGCA 57.228 33.333 0.00 0.00 0.00 3.96
2415 4168 5.679382 GCTGTAAAATATGCATGCCAGTTGA 60.679 40.000 16.68 0.00 0.00 3.18
2481 4234 2.530701 AGGTGCTAGTGCTTACTGAGT 58.469 47.619 0.00 0.00 40.48 3.41
2482 4235 2.900546 AGGTGCTAGTGCTTACTGAGTT 59.099 45.455 0.00 0.00 40.48 3.01
2483 4236 2.996621 GGTGCTAGTGCTTACTGAGTTG 59.003 50.000 0.00 0.00 40.48 3.16
2484 4237 2.996621 GTGCTAGTGCTTACTGAGTTGG 59.003 50.000 0.00 0.00 40.48 3.77
2485 4238 2.632996 TGCTAGTGCTTACTGAGTTGGT 59.367 45.455 0.00 0.00 40.48 3.67
2486 4239 3.254892 GCTAGTGCTTACTGAGTTGGTC 58.745 50.000 0.00 0.00 36.03 4.02
2487 4240 3.056465 GCTAGTGCTTACTGAGTTGGTCT 60.056 47.826 0.00 0.00 36.03 3.85
2488 4241 4.561734 GCTAGTGCTTACTGAGTTGGTCTT 60.562 45.833 0.00 0.00 36.03 3.01
2489 4242 3.996480 AGTGCTTACTGAGTTGGTCTTC 58.004 45.455 0.00 0.00 0.00 2.87
2490 4243 3.388024 AGTGCTTACTGAGTTGGTCTTCA 59.612 43.478 0.00 0.00 0.00 3.02
2491 4244 4.127171 GTGCTTACTGAGTTGGTCTTCAA 58.873 43.478 0.00 0.00 0.00 2.69
2492 4245 4.574828 GTGCTTACTGAGTTGGTCTTCAAA 59.425 41.667 0.00 0.00 37.08 2.69
2493 4246 5.065988 GTGCTTACTGAGTTGGTCTTCAAAA 59.934 40.000 0.00 0.00 37.08 2.44
2494 4247 5.065988 TGCTTACTGAGTTGGTCTTCAAAAC 59.934 40.000 0.00 0.00 37.08 2.43
2495 4248 5.065988 GCTTACTGAGTTGGTCTTCAAAACA 59.934 40.000 0.00 0.00 37.08 2.83
2496 4249 6.677781 TTACTGAGTTGGTCTTCAAAACAG 57.322 37.500 0.00 0.00 41.72 3.16
2513 4266 4.568152 AACAGTTGGTCTTGTATTGCAC 57.432 40.909 0.00 0.00 0.00 4.57
2615 4368 2.031683 AGTGCAAAACAGCGACACTTAC 59.968 45.455 0.00 0.00 38.38 2.34
2646 4400 4.827835 CGGAGGGAGATCTGTTATTACTGA 59.172 45.833 0.00 0.00 36.77 3.41
2666 4420 9.991906 TTACTGAAGGTACATAAGTAATATGCC 57.008 33.333 10.17 0.00 44.46 4.40
2667 4421 8.029782 ACTGAAGGTACATAAGTAATATGCCA 57.970 34.615 0.00 0.00 44.46 4.92
2668 4422 8.660435 ACTGAAGGTACATAAGTAATATGCCAT 58.340 33.333 0.00 0.00 44.46 4.40
2669 4423 9.507329 CTGAAGGTACATAAGTAATATGCCATT 57.493 33.333 0.00 0.00 44.46 3.16
2672 4426 9.449719 AAGGTACATAAGTAATATGCCATTAGC 57.550 33.333 0.00 0.00 44.46 3.09
2673 4427 8.602424 AGGTACATAAGTAATATGCCATTAGCA 58.398 33.333 0.00 0.00 44.46 3.49
2674 4428 8.665685 GGTACATAAGTAATATGCCATTAGCAC 58.334 37.037 0.00 0.00 43.02 4.40
2675 4429 8.380644 GTACATAAGTAATATGCCATTAGCACG 58.619 37.037 0.00 0.00 43.02 5.34
2712 4466 2.375509 AGACCGGGTCTCTTTTCCAATT 59.624 45.455 23.90 0.00 38.71 2.32
2725 4479 1.646912 TCCAATTACGTGAGACCCCA 58.353 50.000 0.00 0.00 0.00 4.96
2768 4522 6.145858 GTCTAGCACATATCTCAAAGCATCTG 59.854 42.308 0.00 0.00 0.00 2.90
2791 4545 0.113190 CCCCAAAGATATCCCCAGCC 59.887 60.000 0.00 0.00 0.00 4.85
2852 4606 6.734755 AGCATCTTCTATCTCCTTAATCCCAT 59.265 38.462 0.00 0.00 0.00 4.00
2862 4616 4.037222 TCCTTAATCCCATCTAGTGTGCA 58.963 43.478 0.00 0.00 0.00 4.57
2920 4681 1.406539 CAATTGGTGATGGCTACTGGC 59.593 52.381 0.00 0.00 40.90 4.85
2933 4694 0.320421 TACTGGCGAACCACTTCTGC 60.320 55.000 0.00 0.00 42.67 4.26
2938 4699 1.134670 GGCGAACCACTTCTGCTCTAT 60.135 52.381 0.00 0.00 35.26 1.98
2948 4709 6.173339 CCACTTCTGCTCTATTCCAAAACTA 58.827 40.000 0.00 0.00 0.00 2.24
3004 4765 6.538742 TGTTCTTTTATCCTTAGCCATCTTCG 59.461 38.462 0.00 0.00 0.00 3.79
3090 4851 5.250982 ACTGCAGAGATGTGATCAAAATGA 58.749 37.500 23.35 0.00 0.00 2.57
3096 4857 5.886474 AGAGATGTGATCAAAATGACATGCT 59.114 36.000 0.00 0.00 39.45 3.79
3232 4993 1.069090 GATAGACATTGCCGGCCGA 59.931 57.895 30.73 13.73 0.00 5.54
3236 4997 4.108299 ACATTGCCGGCCGATGGA 62.108 61.111 31.27 9.62 39.29 3.41
3251 5012 3.243301 CCGATGGAAATTTGGCAGAGATG 60.243 47.826 0.00 0.00 0.00 2.90
3941 5703 4.579869 ACTGCCGTTAAGAGTTGATCAAT 58.420 39.130 12.12 0.66 0.00 2.57
4178 5940 7.557719 CCAGATTTAGGTTTGTGGAAGTATGAT 59.442 37.037 0.00 0.00 0.00 2.45
4234 5996 7.268199 AGATAAAGTCATGGCATGTATTGTG 57.732 36.000 25.62 1.20 0.00 3.33
4255 6017 4.268405 GTGTGCTGATTGTTTTTGTGGAAG 59.732 41.667 0.00 0.00 0.00 3.46
4264 6026 3.574396 TGTTTTTGTGGAAGTGTGGTTCA 59.426 39.130 0.00 0.00 0.00 3.18
4273 6035 4.536090 TGGAAGTGTGGTTCATTCTATCCT 59.464 41.667 0.00 0.00 0.00 3.24
4276 6038 6.351881 GGAAGTGTGGTTCATTCTATCCTGTA 60.352 42.308 0.00 0.00 0.00 2.74
4721 6484 2.643551 AGGGAGTTATTGGCAATGACG 58.356 47.619 23.97 0.00 33.07 4.35
4747 6510 2.371841 TGCTACTTGGTGACTGTTGGAT 59.628 45.455 0.00 0.00 0.00 3.41
4844 6621 4.637091 TCTGTGTCAGCAATACATGAATGG 59.363 41.667 0.00 0.00 0.00 3.16
4995 6772 0.452184 ACGACTCACAGTATGCTCCG 59.548 55.000 0.00 0.00 42.53 4.63
5009 6786 0.320697 GCTCCGTGGGTAAGTTGACT 59.679 55.000 0.00 0.00 0.00 3.41
5010 6787 1.939838 GCTCCGTGGGTAAGTTGACTG 60.940 57.143 0.00 0.00 0.00 3.51
5414 7194 7.396339 TCATAGAGTTCTTCAGTTTACTAGGCA 59.604 37.037 0.00 0.00 0.00 4.75
5415 7195 6.613153 AGAGTTCTTCAGTTTACTAGGCAT 57.387 37.500 0.00 0.00 0.00 4.40
5416 7196 6.402222 AGAGTTCTTCAGTTTACTAGGCATG 58.598 40.000 0.00 0.00 0.00 4.06
5417 7197 6.211584 AGAGTTCTTCAGTTTACTAGGCATGA 59.788 38.462 0.00 0.00 0.00 3.07
5418 7198 6.951971 AGTTCTTCAGTTTACTAGGCATGAT 58.048 36.000 0.00 0.00 0.00 2.45
5419 7199 7.398024 AGTTCTTCAGTTTACTAGGCATGATT 58.602 34.615 0.00 0.00 0.00 2.57
5420 7200 7.885399 AGTTCTTCAGTTTACTAGGCATGATTT 59.115 33.333 0.00 0.00 0.00 2.17
5421 7201 7.615582 TCTTCAGTTTACTAGGCATGATTTG 57.384 36.000 0.00 0.00 0.00 2.32
5422 7202 7.168219 TCTTCAGTTTACTAGGCATGATTTGT 58.832 34.615 0.00 0.00 0.00 2.83
5423 7203 7.665559 TCTTCAGTTTACTAGGCATGATTTGTT 59.334 33.333 0.00 0.00 0.00 2.83
5424 7204 7.759489 TCAGTTTACTAGGCATGATTTGTTT 57.241 32.000 0.00 0.00 0.00 2.83
5425 7205 7.592938 TCAGTTTACTAGGCATGATTTGTTTG 58.407 34.615 0.00 0.00 0.00 2.93
5426 7206 7.446931 TCAGTTTACTAGGCATGATTTGTTTGA 59.553 33.333 0.00 0.00 0.00 2.69
5427 7207 7.538678 CAGTTTACTAGGCATGATTTGTTTGAC 59.461 37.037 0.00 0.00 0.00 3.18
5428 7208 6.509418 TTACTAGGCATGATTTGTTTGACC 57.491 37.500 0.00 0.00 0.00 4.02
5429 7209 4.666512 ACTAGGCATGATTTGTTTGACCT 58.333 39.130 0.00 0.00 0.00 3.85
5430 7210 5.079643 ACTAGGCATGATTTGTTTGACCTT 58.920 37.500 0.00 0.00 0.00 3.50
5431 7211 4.261578 AGGCATGATTTGTTTGACCTTG 57.738 40.909 0.00 0.00 0.00 3.61
5432 7212 3.007182 AGGCATGATTTGTTTGACCTTGG 59.993 43.478 0.00 0.00 0.00 3.61
5433 7213 3.328505 GCATGATTTGTTTGACCTTGGG 58.671 45.455 0.00 0.00 0.00 4.12
5434 7214 3.244181 GCATGATTTGTTTGACCTTGGGT 60.244 43.478 0.00 0.00 39.44 4.51
5435 7215 4.309099 CATGATTTGTTTGACCTTGGGTG 58.691 43.478 0.00 0.00 35.25 4.61
5436 7216 3.370104 TGATTTGTTTGACCTTGGGTGT 58.630 40.909 0.00 0.00 35.25 4.16
5437 7217 4.537751 TGATTTGTTTGACCTTGGGTGTA 58.462 39.130 0.00 0.00 35.25 2.90
5438 7218 5.144100 TGATTTGTTTGACCTTGGGTGTAT 58.856 37.500 0.00 0.00 35.25 2.29
5439 7219 4.927978 TTTGTTTGACCTTGGGTGTATG 57.072 40.909 0.00 0.00 35.25 2.39
5440 7220 2.235016 TGTTTGACCTTGGGTGTATGC 58.765 47.619 0.00 0.00 35.25 3.14
5441 7221 1.544246 GTTTGACCTTGGGTGTATGCC 59.456 52.381 0.00 0.00 35.25 4.40
5442 7222 0.774276 TTGACCTTGGGTGTATGCCA 59.226 50.000 0.00 0.00 35.25 4.92
5443 7223 0.998928 TGACCTTGGGTGTATGCCAT 59.001 50.000 0.00 0.00 35.25 4.40
5444 7224 1.340893 TGACCTTGGGTGTATGCCATG 60.341 52.381 0.00 0.00 35.25 3.66
5445 7225 0.704076 ACCTTGGGTGTATGCCATGT 59.296 50.000 0.00 0.00 32.98 3.21
5446 7226 1.105457 CCTTGGGTGTATGCCATGTG 58.895 55.000 0.00 0.00 0.00 3.21
5447 7227 1.616725 CCTTGGGTGTATGCCATGTGT 60.617 52.381 0.00 0.00 0.00 3.72
5448 7228 1.473677 CTTGGGTGTATGCCATGTGTG 59.526 52.381 0.00 0.00 0.00 3.82
5458 7238 2.492418 CCATGTGTGGTGTATGCCC 58.508 57.895 0.00 0.00 40.83 5.36
5459 7239 0.034186 CCATGTGTGGTGTATGCCCT 60.034 55.000 0.00 0.00 40.83 5.19
5460 7240 1.616725 CCATGTGTGGTGTATGCCCTT 60.617 52.381 0.00 0.00 40.83 3.95
5487 7267 2.526077 CAGCAAGCAAGCATATGTGTG 58.474 47.619 4.29 4.14 36.85 3.82
5570 7457 7.217447 CACCGGTAGCTATTTAATTCAAAAACG 59.783 37.037 6.87 0.00 0.00 3.60
5603 7490 2.401766 GGCATGCCAGACTTCACCG 61.402 63.158 32.08 0.00 35.81 4.94
5610 7497 3.792401 TGCCAGACTTCACCGTATAATG 58.208 45.455 0.00 0.00 0.00 1.90
5624 7511 7.289317 TCACCGTATAATGAGAAATACTCCCTT 59.711 37.037 0.00 0.00 44.34 3.95
5627 7514 7.931948 CCGTATAATGAGAAATACTCCCTTTGT 59.068 37.037 0.00 0.00 44.34 2.83
5755 7661 7.303261 TCTGTAGTTCGTATAGTTGTTGACTG 58.697 38.462 0.00 0.00 39.48 3.51
5788 7694 3.695830 ATGGGTGGTGTGTACAGTTAG 57.304 47.619 0.00 0.00 0.00 2.34
5864 7770 6.594744 TCATCTTACATGGTAATCACAGCAT 58.405 36.000 0.00 0.00 37.11 3.79
5937 7843 6.798482 TGGCATAGCTTTCATAGTGAATTTG 58.202 36.000 0.00 0.00 36.11 2.32
5950 7856 9.719355 TCATAGTGAATTTGTAGTTTTCTAGCA 57.281 29.630 0.00 0.00 32.55 3.49
5954 7860 9.066892 AGTGAATTTGTAGTTTTCTAGCAATCA 57.933 29.630 0.00 0.00 32.55 2.57
5955 7861 9.677567 GTGAATTTGTAGTTTTCTAGCAATCAA 57.322 29.630 0.00 0.00 32.55 2.57
6012 7918 7.742963 GGTACGTGATGTAATAGTTTTGTGTTG 59.257 37.037 0.00 0.00 34.07 3.33
6030 7936 6.815089 TGTGTTGAATTTTAGAAGTGGCATT 58.185 32.000 0.00 0.00 0.00 3.56
6039 7945 8.992835 ATTTTAGAAGTGGCATTCTCATTTTC 57.007 30.769 13.13 0.00 40.08 2.29
6065 7971 7.276218 CACTGCAATTAACCCTGAATATTGTTG 59.724 37.037 0.00 0.00 0.00 3.33
6068 7974 7.125507 TGCAATTAACCCTGAATATTGTTGGAT 59.874 33.333 0.00 0.00 0.00 3.41
6069 7975 7.439056 GCAATTAACCCTGAATATTGTTGGATG 59.561 37.037 0.00 0.00 0.00 3.51
6072 7978 2.629617 CCCTGAATATTGTTGGATGGGC 59.370 50.000 0.00 0.00 0.00 5.36
6074 7980 2.294233 CTGAATATTGTTGGATGGGCCG 59.706 50.000 0.00 0.00 40.66 6.13
6087 7994 2.738587 TGGGCCGGCAAATATTTAGA 57.261 45.000 30.85 0.00 0.00 2.10
6131 8038 4.766373 AGATGATTGTGTTTGGTATGTGCA 59.234 37.500 0.00 0.00 0.00 4.57
6170 8077 8.798975 ATATATCTCCAGAAGTTAGGTCCAAA 57.201 34.615 0.00 0.00 0.00 3.28
6185 8092 3.699538 GGTCCAAATAAGACATTGGGGTC 59.300 47.826 4.83 0.00 44.99 4.46
6228 8135 4.149046 CAGTCTACTCTTTGTTCGTTCTGC 59.851 45.833 0.00 0.00 0.00 4.26
6297 8204 6.759497 ATGTTAGGATAGTTTCTTTGGTGC 57.241 37.500 0.00 0.00 0.00 5.01
6298 8205 5.626142 TGTTAGGATAGTTTCTTTGGTGCA 58.374 37.500 0.00 0.00 0.00 4.57
6299 8206 5.705441 TGTTAGGATAGTTTCTTTGGTGCAG 59.295 40.000 0.00 0.00 0.00 4.41
6300 8207 4.373156 AGGATAGTTTCTTTGGTGCAGT 57.627 40.909 0.00 0.00 0.00 4.40
6301 8208 4.327680 AGGATAGTTTCTTTGGTGCAGTC 58.672 43.478 0.00 0.00 0.00 3.51
6302 8209 3.125316 GGATAGTTTCTTTGGTGCAGTCG 59.875 47.826 0.00 0.00 0.00 4.18
6303 8210 1.308998 AGTTTCTTTGGTGCAGTCGG 58.691 50.000 0.00 0.00 0.00 4.79
6304 8211 0.310854 GTTTCTTTGGTGCAGTCGGG 59.689 55.000 0.00 0.00 0.00 5.14
6305 8212 0.821711 TTTCTTTGGTGCAGTCGGGG 60.822 55.000 0.00 0.00 0.00 5.73
6374 8281 2.551270 GGCTGTGCGTTGAACTCG 59.449 61.111 0.00 0.00 0.00 4.18
6390 8297 3.391382 CGCTCTCCCCTTTCCCGT 61.391 66.667 0.00 0.00 0.00 5.28
6406 8313 1.257743 CCGTCTCCTTTCTCTGGTCA 58.742 55.000 0.00 0.00 0.00 4.02
6447 8354 5.650703 CGTTATTCAGTTAATGGAAAGGGGT 59.349 40.000 0.00 0.00 0.00 4.95
6527 8504 9.702726 CGTGTGACTAAAATTATATTTGAGTGG 57.297 33.333 6.84 0.00 0.00 4.00
6567 8544 7.120579 TGTCATGTCCTGAATGGTAAAATGTAC 59.879 37.037 0.00 0.00 35.07 2.90
6568 8545 7.336931 GTCATGTCCTGAATGGTAAAATGTACT 59.663 37.037 0.00 0.00 35.07 2.73
6569 8546 7.552687 TCATGTCCTGAATGGTAAAATGTACTC 59.447 37.037 0.00 0.00 37.07 2.59
6570 8547 6.177610 TGTCCTGAATGGTAAAATGTACTCC 58.822 40.000 0.00 0.00 37.07 3.85
6571 8548 5.589050 GTCCTGAATGGTAAAATGTACTCCC 59.411 44.000 0.00 0.00 37.07 4.30
6573 8550 5.823045 CCTGAATGGTAAAATGTACTCCCTC 59.177 44.000 0.00 0.00 0.00 4.30
6574 8551 5.751586 TGAATGGTAAAATGTACTCCCTCC 58.248 41.667 0.00 0.00 0.00 4.30
6575 8552 3.899052 TGGTAAAATGTACTCCCTCCG 57.101 47.619 0.00 0.00 0.00 4.63
6576 8553 3.175594 TGGTAAAATGTACTCCCTCCGT 58.824 45.455 0.00 0.00 0.00 4.69
6577 8554 3.583966 TGGTAAAATGTACTCCCTCCGTT 59.416 43.478 0.00 0.00 0.00 4.44
6578 8555 4.186926 GGTAAAATGTACTCCCTCCGTTC 58.813 47.826 0.00 0.00 0.00 3.95
6579 8556 3.345508 AAAATGTACTCCCTCCGTTCC 57.654 47.619 0.00 0.00 0.00 3.62
6582 8559 2.905415 TGTACTCCCTCCGTTCCTAA 57.095 50.000 0.00 0.00 0.00 2.69
6584 8561 3.716431 TGTACTCCCTCCGTTCCTAAAT 58.284 45.455 0.00 0.00 0.00 1.40
6586 8563 4.646492 TGTACTCCCTCCGTTCCTAAATAC 59.354 45.833 0.00 0.00 0.00 1.89
6587 8564 3.716431 ACTCCCTCCGTTCCTAAATACA 58.284 45.455 0.00 0.00 0.00 2.29
6588 8565 4.098894 ACTCCCTCCGTTCCTAAATACAA 58.901 43.478 0.00 0.00 0.00 2.41
6590 8567 4.098894 TCCCTCCGTTCCTAAATACAAGT 58.901 43.478 0.00 0.00 0.00 3.16
6591 8568 4.161001 TCCCTCCGTTCCTAAATACAAGTC 59.839 45.833 0.00 0.00 0.00 3.01
6593 8570 5.338137 CCCTCCGTTCCTAAATACAAGTCTT 60.338 44.000 0.00 0.00 0.00 3.01
6594 8571 6.171213 CCTCCGTTCCTAAATACAAGTCTTT 58.829 40.000 0.00 0.00 0.00 2.52
6596 8573 7.820872 CCTCCGTTCCTAAATACAAGTCTTTTA 59.179 37.037 0.00 0.00 0.00 1.52
6597 8574 9.211485 CTCCGTTCCTAAATACAAGTCTTTTAA 57.789 33.333 0.00 0.00 0.00 1.52
6598 8575 9.211485 TCCGTTCCTAAATACAAGTCTTTTAAG 57.789 33.333 0.00 0.00 0.00 1.85
6599 8576 9.211485 CCGTTCCTAAATACAAGTCTTTTAAGA 57.789 33.333 0.00 0.00 0.00 2.10
6622 8599 8.780846 AGAGATTCCACTATAGACTACATACG 57.219 38.462 6.78 0.00 0.00 3.06
6623 8600 7.825270 AGAGATTCCACTATAGACTACATACGG 59.175 40.741 6.78 0.00 0.00 4.02
6624 8601 7.687388 AGATTCCACTATAGACTACATACGGA 58.313 38.462 6.78 0.00 0.00 4.69
6625 8602 7.825270 AGATTCCACTATAGACTACATACGGAG 59.175 40.741 6.78 0.00 0.00 4.63
6628 8605 5.472478 CCACTATAGACTACATACGGAGCAA 59.528 44.000 6.78 0.00 0.00 3.91
6629 8606 6.016527 CCACTATAGACTACATACGGAGCAAA 60.017 42.308 6.78 0.00 0.00 3.68
6630 8607 7.423199 CACTATAGACTACATACGGAGCAAAA 58.577 38.462 6.78 0.00 0.00 2.44
6631 8608 8.082852 CACTATAGACTACATACGGAGCAAAAT 58.917 37.037 6.78 0.00 0.00 1.82
6632 8609 8.082852 ACTATAGACTACATACGGAGCAAAATG 58.917 37.037 6.78 0.00 0.00 2.32
6633 8610 5.339008 AGACTACATACGGAGCAAAATGA 57.661 39.130 0.00 0.00 0.00 2.57
6634 8611 5.352284 AGACTACATACGGAGCAAAATGAG 58.648 41.667 0.00 0.00 0.00 2.90
6635 8612 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
6636 8613 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
6637 8614 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
6638 8615 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
6639 8616 4.154195 ACATACGGAGCAAAATGAGTGAAC 59.846 41.667 0.00 0.00 0.00 3.18
6640 8617 2.851195 ACGGAGCAAAATGAGTGAACT 58.149 42.857 0.00 0.00 0.00 3.01
6641 8618 3.214328 ACGGAGCAAAATGAGTGAACTT 58.786 40.909 0.00 0.00 0.00 2.66
6642 8619 4.385825 ACGGAGCAAAATGAGTGAACTTA 58.614 39.130 0.00 0.00 0.00 2.24
6643 8620 5.003804 ACGGAGCAAAATGAGTGAACTTAT 58.996 37.500 0.00 0.00 0.00 1.73
6644 8621 6.170506 ACGGAGCAAAATGAGTGAACTTATA 58.829 36.000 0.00 0.00 0.00 0.98
6645 8622 6.092259 ACGGAGCAAAATGAGTGAACTTATAC 59.908 38.462 0.00 0.00 0.00 1.47
6646 8623 6.313905 CGGAGCAAAATGAGTGAACTTATACT 59.686 38.462 0.00 0.00 0.00 2.12
6647 8624 7.464710 CGGAGCAAAATGAGTGAACTTATACTC 60.465 40.741 0.00 0.00 42.77 2.59
6648 8625 7.550906 GGAGCAAAATGAGTGAACTTATACTCT 59.449 37.037 0.00 0.00 42.86 3.24
6649 8626 9.587772 GAGCAAAATGAGTGAACTTATACTCTA 57.412 33.333 0.00 0.00 42.86 2.43
6650 8627 9.944376 AGCAAAATGAGTGAACTTATACTCTAA 57.056 29.630 0.00 0.00 42.86 2.10
6655 8632 8.950208 ATGAGTGAACTTATACTCTAAAAGGC 57.050 34.615 0.00 0.00 42.86 4.35
6656 8633 7.033791 TGAGTGAACTTATACTCTAAAAGGCG 58.966 38.462 0.00 0.00 42.86 5.52
6657 8634 6.932947 AGTGAACTTATACTCTAAAAGGCGT 58.067 36.000 0.00 0.00 0.00 5.68
6658 8635 7.034397 AGTGAACTTATACTCTAAAAGGCGTC 58.966 38.462 0.00 0.00 0.00 5.19
6659 8636 7.034397 GTGAACTTATACTCTAAAAGGCGTCT 58.966 38.462 0.00 0.00 0.00 4.18
6660 8637 8.186821 GTGAACTTATACTCTAAAAGGCGTCTA 58.813 37.037 0.00 0.00 0.00 2.59
6661 8638 8.910944 TGAACTTATACTCTAAAAGGCGTCTAT 58.089 33.333 0.00 0.00 0.00 1.98
6669 8646 7.828712 ACTCTAAAAGGCGTCTATATACATCC 58.171 38.462 0.00 0.00 0.00 3.51
6670 8647 6.849502 TCTAAAAGGCGTCTATATACATCCG 58.150 40.000 0.00 0.00 0.00 4.18
6671 8648 5.717078 AAAAGGCGTCTATATACATCCGA 57.283 39.130 0.00 0.00 0.00 4.55
6672 8649 5.717078 AAAGGCGTCTATATACATCCGAA 57.283 39.130 0.00 0.00 0.00 4.30
6673 8650 5.916661 AAGGCGTCTATATACATCCGAAT 57.083 39.130 0.00 0.00 0.00 3.34
6674 8651 5.250235 AGGCGTCTATATACATCCGAATG 57.750 43.478 0.00 0.00 38.93 2.67
6688 8665 7.441890 ACATCCGAATGTAGTCTCTATAGTG 57.558 40.000 0.00 0.00 44.38 2.74
6689 8666 6.999272 ACATCCGAATGTAGTCTCTATAGTGT 59.001 38.462 0.00 0.00 44.38 3.55
6690 8667 6.862711 TCCGAATGTAGTCTCTATAGTGTG 57.137 41.667 0.00 0.00 0.00 3.82
6691 8668 5.763698 TCCGAATGTAGTCTCTATAGTGTGG 59.236 44.000 0.00 0.00 0.00 4.17
6692 8669 5.763698 CCGAATGTAGTCTCTATAGTGTGGA 59.236 44.000 0.00 0.00 0.00 4.02
6693 8670 6.262496 CCGAATGTAGTCTCTATAGTGTGGAA 59.738 42.308 0.00 0.00 0.00 3.53
6694 8671 7.040340 CCGAATGTAGTCTCTATAGTGTGGAAT 60.040 40.741 0.00 0.00 0.00 3.01
6695 8672 8.018520 CGAATGTAGTCTCTATAGTGTGGAATC 58.981 40.741 0.00 0.00 0.00 2.52
6696 8673 9.073475 GAATGTAGTCTCTATAGTGTGGAATCT 57.927 37.037 0.00 0.00 0.00 2.40
6697 8674 8.630054 ATGTAGTCTCTATAGTGTGGAATCTC 57.370 38.462 0.00 0.00 0.00 2.75
6698 8675 7.807198 TGTAGTCTCTATAGTGTGGAATCTCT 58.193 38.462 0.00 0.00 0.00 3.10
6699 8676 8.935741 TGTAGTCTCTATAGTGTGGAATCTCTA 58.064 37.037 0.00 0.00 0.00 2.43
6700 8677 9.431887 GTAGTCTCTATAGTGTGGAATCTCTAG 57.568 40.741 0.00 0.00 0.00 2.43
6701 8678 8.270137 AGTCTCTATAGTGTGGAATCTCTAGA 57.730 38.462 0.00 0.00 0.00 2.43
6702 8679 8.719596 AGTCTCTATAGTGTGGAATCTCTAGAA 58.280 37.037 0.00 0.00 0.00 2.10
6703 8680 8.999431 GTCTCTATAGTGTGGAATCTCTAGAAG 58.001 40.741 0.00 0.00 0.00 2.85
6704 8681 8.160765 TCTCTATAGTGTGGAATCTCTAGAAGG 58.839 40.741 0.00 0.00 0.00 3.46
6705 8682 8.046867 TCTATAGTGTGGAATCTCTAGAAGGA 57.953 38.462 0.00 0.00 0.00 3.36
6706 8683 6.969993 ATAGTGTGGAATCTCTAGAAGGAC 57.030 41.667 0.00 0.00 0.00 3.85
6707 8684 4.941713 AGTGTGGAATCTCTAGAAGGACT 58.058 43.478 0.00 0.00 0.00 3.85
6708 8685 5.337788 AGTGTGGAATCTCTAGAAGGACTT 58.662 41.667 0.00 0.00 0.00 3.01
6709 8686 6.494952 AGTGTGGAATCTCTAGAAGGACTTA 58.505 40.000 0.00 0.00 0.00 2.24
6710 8687 7.129425 AGTGTGGAATCTCTAGAAGGACTTAT 58.871 38.462 0.00 0.00 0.00 1.73
6711 8688 8.282982 AGTGTGGAATCTCTAGAAGGACTTATA 58.717 37.037 0.00 0.00 0.00 0.98
6712 8689 9.084533 GTGTGGAATCTCTAGAAGGACTTATAT 57.915 37.037 0.00 0.00 0.00 0.86
6713 8690 9.661954 TGTGGAATCTCTAGAAGGACTTATATT 57.338 33.333 0.00 0.00 0.00 1.28
6725 8702 8.929487 AGAAGGACTTATATTTAGGAACAGAGG 58.071 37.037 0.00 0.00 0.00 3.69
6726 8703 7.619512 AGGACTTATATTTAGGAACAGAGGG 57.380 40.000 0.00 0.00 0.00 4.30
6727 8704 7.371043 AGGACTTATATTTAGGAACAGAGGGA 58.629 38.462 0.00 0.00 0.00 4.20
6975 8954 2.564062 ACCCAAATGAGATTTGTGGCAG 59.436 45.455 7.96 0.00 46.22 4.85
7143 9139 2.996631 AGTAGCTTTCTTCTGGCATGG 58.003 47.619 0.00 0.00 0.00 3.66
7206 9202 5.698089 TCACAATCAGACAATCAGTTCTGTC 59.302 40.000 0.00 0.00 41.90 3.51
7222 9218 8.807118 TCAGTTCTGTCAGTATATCTTTCTGTT 58.193 33.333 0.00 0.00 0.00 3.16
7498 9512 6.012658 TCAGTTTTACTGCAATGAACCATC 57.987 37.500 1.98 0.00 45.54 3.51
7687 9775 8.352201 CAGTTTTGTCCAAATAAGAGTCATTGA 58.648 33.333 0.00 0.00 0.00 2.57
7749 9837 5.678583 CCCCTCTTATCATATGCATGTAGG 58.321 45.833 10.16 5.08 33.57 3.18
7898 9986 2.169561 CCTTAAGAGGAGAGGCTTGGAC 59.830 54.545 3.36 0.00 46.74 4.02
7899 9987 1.867363 TAAGAGGAGAGGCTTGGACC 58.133 55.000 0.00 0.00 0.00 4.46
7992 10080 0.399091 CAGGGATCTGGAGTGGCCTA 60.399 60.000 3.32 0.00 37.36 3.93
7993 10081 0.105246 AGGGATCTGGAGTGGCCTAG 60.105 60.000 3.32 0.00 37.63 3.02
7994 10082 1.751563 GGATCTGGAGTGGCCTAGC 59.248 63.158 3.32 0.00 37.63 3.42
7995 10083 0.762461 GGATCTGGAGTGGCCTAGCT 60.762 60.000 3.32 0.00 37.63 3.32
7996 10084 0.678950 GATCTGGAGTGGCCTAGCTC 59.321 60.000 3.32 9.12 37.63 4.09
7997 10085 0.031716 ATCTGGAGTGGCCTAGCTCA 60.032 55.000 19.06 5.79 37.63 4.26
7998 10086 0.685785 TCTGGAGTGGCCTAGCTCAG 60.686 60.000 19.06 13.34 37.63 3.35
7999 10087 2.308968 CTGGAGTGGCCTAGCTCAGC 62.309 65.000 19.06 0.00 37.63 4.26
8000 10088 2.063378 GGAGTGGCCTAGCTCAGCT 61.063 63.158 3.60 3.60 43.41 4.24
8001 10089 1.621672 GGAGTGGCCTAGCTCAGCTT 61.622 60.000 3.31 0.00 40.44 3.74
8002 10090 0.179086 GAGTGGCCTAGCTCAGCTTC 60.179 60.000 3.31 0.00 40.44 3.86
8003 10091 0.617249 AGTGGCCTAGCTCAGCTTCT 60.617 55.000 3.31 4.34 40.44 2.85
8004 10092 0.179086 GTGGCCTAGCTCAGCTTCTC 60.179 60.000 3.31 0.00 40.44 2.87
8005 10093 1.067250 GGCCTAGCTCAGCTTCTCG 59.933 63.158 3.31 0.00 40.44 4.04
8006 10094 1.591327 GCCTAGCTCAGCTTCTCGC 60.591 63.158 3.31 0.00 40.44 5.03
8007 10095 1.812525 CCTAGCTCAGCTTCTCGCA 59.187 57.895 3.31 0.00 40.44 5.10
8008 10096 0.527385 CCTAGCTCAGCTTCTCGCAC 60.527 60.000 3.31 0.00 40.44 5.34
8009 10097 0.455410 CTAGCTCAGCTTCTCGCACT 59.545 55.000 3.31 0.00 40.44 4.40
8010 10098 1.673400 CTAGCTCAGCTTCTCGCACTA 59.327 52.381 3.31 0.00 40.44 2.74
8011 10099 0.172352 AGCTCAGCTTCTCGCACTAC 59.828 55.000 0.00 0.00 42.61 2.73
8012 10100 0.804156 GCTCAGCTTCTCGCACTACC 60.804 60.000 0.00 0.00 42.61 3.18
8013 10101 0.814457 CTCAGCTTCTCGCACTACCT 59.186 55.000 0.00 0.00 42.61 3.08
8014 10102 2.017782 CTCAGCTTCTCGCACTACCTA 58.982 52.381 0.00 0.00 42.61 3.08
8015 10103 2.017782 TCAGCTTCTCGCACTACCTAG 58.982 52.381 0.00 0.00 42.61 3.02
8016 10104 1.066303 CAGCTTCTCGCACTACCTAGG 59.934 57.143 7.41 7.41 42.61 3.02
8017 10105 0.386113 GCTTCTCGCACTACCTAGGG 59.614 60.000 14.81 0.00 38.92 3.53
8018 10106 1.765230 CTTCTCGCACTACCTAGGGT 58.235 55.000 14.81 0.00 40.16 4.34
8019 10107 1.405821 CTTCTCGCACTACCTAGGGTG 59.594 57.143 14.81 13.45 38.54 4.61
8020 10108 0.395311 TCTCGCACTACCTAGGGTGG 60.395 60.000 14.81 5.06 40.15 4.61
8021 10109 1.380785 TCGCACTACCTAGGGTGGG 60.381 63.158 21.79 21.79 44.23 4.61
8022 10110 2.908796 GCACTACCTAGGGTGGGC 59.091 66.667 14.81 14.06 38.55 5.36
8023 10111 1.689582 GCACTACCTAGGGTGGGCT 60.690 63.158 19.33 0.00 38.55 5.19
8156 10245 4.021544 GCTTGGGACATGAACATTTAACCA 60.022 41.667 0.00 0.00 39.30 3.67
8194 10283 2.117156 GCCCGCATCAATCTGCTGT 61.117 57.895 0.00 0.00 40.06 4.40
8257 10346 0.755327 GCAACCCCATATGGTGACCC 60.755 60.000 20.46 2.42 39.05 4.46
8258 10347 0.106217 CAACCCCATATGGTGACCCC 60.106 60.000 20.46 0.00 39.05 4.95
8331 10432 0.809385 CTGCCATTTCAGCACCTCTG 59.191 55.000 0.00 0.00 44.21 3.35
8348 10451 4.016479 ACCTCTGGGTGATAGGAGACTTTA 60.016 45.833 0.00 0.00 45.43 1.85
8394 10497 4.536765 ACTGAGGTTGAACATGACCTTTT 58.463 39.130 0.00 0.00 46.01 2.27
8514 10618 5.948992 AAGAAACTGGTCTTTATGCTGAC 57.051 39.130 0.00 0.00 34.03 3.51
8550 10654 8.414229 GTGATTTTCACTTTGAAGACCAGCTTC 61.414 40.741 0.45 0.00 46.24 3.86
8617 10728 5.715434 TCCATTGATTGCCATGTCATATG 57.285 39.130 0.00 0.00 0.00 1.78
8657 10769 2.989881 GCCGGCTGCCAACTAAACC 61.990 63.158 22.15 0.00 0.00 3.27
8661 10773 1.579429 GCTGCCAACTAAACCACGG 59.421 57.895 0.00 0.00 0.00 4.94
8662 10774 0.887387 GCTGCCAACTAAACCACGGA 60.887 55.000 0.00 0.00 0.00 4.69
8663 10775 1.156736 CTGCCAACTAAACCACGGAG 58.843 55.000 0.00 0.00 0.00 4.63
8685 10797 4.784550 AGAAAAAGTTTCGAAAACGACGTG 59.215 37.500 13.10 0.00 0.00 4.49
8709 10983 0.654160 CATCATGTGTTGAGCGCGAT 59.346 50.000 12.10 1.23 37.89 4.58
8714 10988 0.599991 TGTGTTGAGCGCGATGTCTT 60.600 50.000 12.10 0.00 0.00 3.01
8717 10991 1.601903 TGTTGAGCGCGATGTCTTTTT 59.398 42.857 12.10 0.00 0.00 1.94
8734 11008 3.829886 TTTTGGCTATCTTTGTCGCAG 57.170 42.857 0.00 0.00 0.00 5.18
8739 11013 2.939103 GGCTATCTTTGTCGCAGATTGT 59.061 45.455 0.00 0.00 40.67 2.71
8741 11015 3.618594 GCTATCTTTGTCGCAGATTGTGA 59.381 43.478 0.00 0.00 40.67 3.58
8742 11016 4.272018 GCTATCTTTGTCGCAGATTGTGAT 59.728 41.667 0.00 0.00 39.28 3.06
8744 11018 3.002791 TCTTTGTCGCAGATTGTGATCC 58.997 45.455 0.00 0.00 39.28 3.36
8745 11019 2.470983 TTGTCGCAGATTGTGATCCA 57.529 45.000 0.00 0.00 39.28 3.41
8746 11020 1.725641 TGTCGCAGATTGTGATCCAC 58.274 50.000 0.00 0.00 39.28 4.02
8747 11021 0.647410 GTCGCAGATTGTGATCCACG 59.353 55.000 0.00 0.00 39.28 4.94
8750 11024 1.201954 CGCAGATTGTGATCCACGTTG 60.202 52.381 0.00 0.00 37.14 4.10
8751 11025 1.131126 GCAGATTGTGATCCACGTTGG 59.869 52.381 0.00 0.00 37.14 3.77
8753 11027 2.416547 CAGATTGTGATCCACGTTGGTC 59.583 50.000 0.00 0.00 39.03 4.02
8754 11028 1.393539 GATTGTGATCCACGTTGGTCG 59.606 52.381 0.00 0.00 46.00 4.79
8755 11029 1.225376 TTGTGATCCACGTTGGTCGC 61.225 55.000 6.51 6.51 44.19 5.19
8756 11030 2.047655 TGATCCACGTTGGTCGCC 60.048 61.111 0.00 0.00 44.19 5.54
8758 11032 1.252215 TGATCCACGTTGGTCGCCTA 61.252 55.000 0.00 0.00 44.19 3.93
8759 11033 0.804933 GATCCACGTTGGTCGCCTAC 60.805 60.000 0.00 1.60 44.19 3.18
8774 13273 1.871080 CCTACGTTGATGAGATGCCC 58.129 55.000 0.00 0.00 0.00 5.36
8775 13274 1.138859 CCTACGTTGATGAGATGCCCA 59.861 52.381 0.00 0.00 0.00 5.36
8811 13310 2.332654 GCACCGCCTAACAAGTGGG 61.333 63.158 0.00 0.00 39.30 4.61
8817 13316 1.298859 GCCTAACAAGTGGGTCGCTG 61.299 60.000 0.00 0.00 0.00 5.18
8859 13360 2.656085 GATCGCTCGATCCAGTAACTG 58.344 52.381 18.52 0.00 43.71 3.16
8879 13380 2.556189 TGGGTTCATGATGAAACAACCG 59.444 45.455 23.16 0.00 45.53 4.44
8880 13381 2.556622 GGGTTCATGATGAAACAACCGT 59.443 45.455 23.16 0.00 45.53 4.83
8889 13390 2.841215 TGAAACAACCGTAAGTCCCAG 58.159 47.619 0.00 0.00 0.00 4.45
8898 13399 4.828829 ACCGTAAGTCCCAGTATTTTGAG 58.171 43.478 0.00 0.00 0.00 3.02
8900 13401 5.481473 ACCGTAAGTCCCAGTATTTTGAGTA 59.519 40.000 0.00 0.00 0.00 2.59
8904 13405 6.435292 AAGTCCCAGTATTTTGAGTAGTGT 57.565 37.500 0.00 0.00 0.00 3.55
8927 13428 3.799035 CTTTCCGATCACGAAACAACAG 58.201 45.455 0.00 0.00 42.66 3.16
8934 13435 3.870723 TCACGAAACAACAGCATACAC 57.129 42.857 0.00 0.00 0.00 2.90
8949 13450 4.018960 AGCATACACAAAAGAGAGTGGGAT 60.019 41.667 0.00 0.00 39.99 3.85
8994 13495 5.350365 TGTGTGATTATCGGAAGCAAACTAC 59.650 40.000 9.82 1.60 0.00 2.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 2.665603 GCTTCCAAGTCCTCGCCT 59.334 61.111 0.00 0.00 0.00 5.52
93 94 3.002583 TCCTGCTGGGTGATCGCA 61.003 61.111 10.07 0.06 36.25 5.10
189 190 1.134401 TCATCTTCTGGCGTTCCATCC 60.134 52.381 0.00 0.00 42.51 3.51
190 191 2.315925 TCATCTTCTGGCGTTCCATC 57.684 50.000 0.00 0.00 42.51 3.51
191 192 2.437281 AGATCATCTTCTGGCGTTCCAT 59.563 45.455 0.00 0.00 42.51 3.41
216 217 2.249125 TGGAGGAGGAGGAGGCAGA 61.249 63.158 0.00 0.00 0.00 4.26
306 307 1.003355 CCACTTGTCATCGCCACCT 60.003 57.895 0.00 0.00 0.00 4.00
308 309 2.690778 GCCCACTTGTCATCGCCAC 61.691 63.158 0.00 0.00 0.00 5.01
309 310 2.359850 GCCCACTTGTCATCGCCA 60.360 61.111 0.00 0.00 0.00 5.69
334 335 1.137086 CTAGACCCACTTGTCATCCGG 59.863 57.143 0.00 0.00 37.73 5.14
336 337 2.093447 CCACTAGACCCACTTGTCATCC 60.093 54.545 0.00 0.00 37.73 3.51
368 369 2.821546 TCAGTTCAGTTCAGTTCCACG 58.178 47.619 0.00 0.00 0.00 4.94
375 376 3.941483 ACAACCAGTTCAGTTCAGTTCAG 59.059 43.478 0.00 0.00 0.00 3.02
403 404 2.027751 GGGGACGCTACGAGCATC 59.972 66.667 7.47 1.89 42.58 3.91
505 507 0.522626 TCGCATACGACAGGAAACGA 59.477 50.000 0.00 0.00 45.12 3.85
534 536 4.569653 CCCAGAATTTACAGGGTTCATCCA 60.570 45.833 0.00 0.00 36.52 3.41
627 629 1.244697 ACAAACACACCACGCCAACA 61.245 50.000 0.00 0.00 0.00 3.33
633 636 3.375922 AGGAAGTAAACAAACACACCACG 59.624 43.478 0.00 0.00 0.00 4.94
637 640 3.624410 ACGGAGGAAGTAAACAAACACAC 59.376 43.478 0.00 0.00 0.00 3.82
662 665 9.722056 CCAGATATTACGATCCAAAAGAAAAAG 57.278 33.333 0.00 0.00 0.00 2.27
663 666 8.682710 CCCAGATATTACGATCCAAAAGAAAAA 58.317 33.333 0.00 0.00 0.00 1.94
664 667 7.284489 CCCCAGATATTACGATCCAAAAGAAAA 59.716 37.037 0.00 0.00 0.00 2.29
665 668 6.770785 CCCCAGATATTACGATCCAAAAGAAA 59.229 38.462 0.00 0.00 0.00 2.52
675 678 6.498651 AGAAGACATTCCCCAGATATTACGAT 59.501 38.462 0.00 0.00 35.94 3.73
676 679 5.839063 AGAAGACATTCCCCAGATATTACGA 59.161 40.000 0.00 0.00 35.94 3.43
703 706 2.939261 TTCACGGGGGAGAACGCTC 61.939 63.158 0.00 0.00 40.54 5.03
710 713 4.029809 GTGGGGTTCACGGGGGAG 62.030 72.222 0.00 0.00 36.56 4.30
739 2455 2.224281 TGAGTTACTGCCAGTTCAGTGG 60.224 50.000 1.02 0.00 45.95 4.00
749 2465 6.509418 TTTTGGACATTATGAGTTACTGCC 57.491 37.500 0.00 0.00 0.00 4.85
1289 3019 0.742635 GCAGGCACAGGCTAAGAGAC 60.743 60.000 0.00 0.00 40.87 3.36
1314 3044 0.907704 TCATGCCCACCTAAGACCGT 60.908 55.000 0.00 0.00 0.00 4.83
1341 3071 0.676184 TGGAGCTGCCGAGATCATAC 59.324 55.000 1.53 0.00 36.24 2.39
1432 3165 2.052690 CGGTGAGATCCAGGACGGT 61.053 63.158 0.00 0.00 35.57 4.83
1437 3170 2.187946 GCCACGGTGAGATCCAGG 59.812 66.667 10.28 0.00 0.00 4.45
1456 3189 8.264632 ACGAAATTCTACGAATTAATAGAACGC 58.735 33.333 11.31 5.49 39.58 4.84
1539 3273 0.512952 GTTCGCAAGTCGCAACAGAT 59.487 50.000 0.00 0.00 42.60 2.90
1542 3276 1.087202 AGTGTTCGCAAGTCGCAACA 61.087 50.000 0.00 0.00 42.60 3.33
1543 3277 0.654472 CAGTGTTCGCAAGTCGCAAC 60.654 55.000 0.00 0.00 42.60 4.17
1545 3279 0.808060 TTCAGTGTTCGCAAGTCGCA 60.808 50.000 0.00 0.00 42.60 5.10
1546 3280 0.383124 GTTCAGTGTTCGCAAGTCGC 60.383 55.000 0.00 0.00 38.27 5.19
1547 3281 0.232303 GGTTCAGTGTTCGCAAGTCG 59.768 55.000 0.00 0.00 40.15 4.18
1548 3282 1.583054 AGGTTCAGTGTTCGCAAGTC 58.417 50.000 0.00 0.00 39.48 3.01
1549 3283 1.670811 CAAGGTTCAGTGTTCGCAAGT 59.329 47.619 0.00 0.00 39.48 3.16
1597 3345 8.211629 ACAAGGTGACAGTAGAAAACTAGAAAT 58.788 33.333 0.00 0.00 35.76 2.17
1620 3368 3.091545 GGAGGATGGCATTTCTCAACAA 58.908 45.455 23.60 0.00 0.00 2.83
1634 3382 8.970859 AACTAGAAATTAATCTGTGGAGGATG 57.029 34.615 0.00 0.00 0.00 3.51
1743 3491 4.097286 ACAAAATAAACCTCACGCACTTGT 59.903 37.500 0.00 0.00 0.00 3.16
1744 3492 4.606961 ACAAAATAAACCTCACGCACTTG 58.393 39.130 0.00 0.00 0.00 3.16
1745 3493 4.578928 AGACAAAATAAACCTCACGCACTT 59.421 37.500 0.00 0.00 0.00 3.16
1746 3494 4.134563 AGACAAAATAAACCTCACGCACT 58.865 39.130 0.00 0.00 0.00 4.40
1747 3495 4.483476 AGACAAAATAAACCTCACGCAC 57.517 40.909 0.00 0.00 0.00 5.34
1773 3521 7.823745 AAGACTGTTTCTGTACCATTTTCAT 57.176 32.000 0.00 0.00 33.46 2.57
1891 3643 9.768662 ACATGCATAAGAAAAACAGAAATTTCT 57.231 25.926 15.11 15.11 45.30 2.52
1906 3658 4.343814 TGAGGACGGAATACATGCATAAGA 59.656 41.667 0.00 0.00 0.00 2.10
1920 3672 1.103803 GTGCTGTCTATGAGGACGGA 58.896 55.000 7.52 0.00 43.20 4.69
1963 3715 5.429130 GAGGAATACAAGTAGGGTGGAAAG 58.571 45.833 0.00 0.00 0.00 2.62
2039 3791 0.741221 CCTGGCGAGTAACTTCTGCC 60.741 60.000 0.00 0.00 45.91 4.85
2043 3795 1.183549 TCTCCCTGGCGAGTAACTTC 58.816 55.000 10.66 0.00 0.00 3.01
2055 3807 5.500234 TCAATCAATAGTTGGTTCTCCCTG 58.500 41.667 0.00 0.00 29.90 4.45
2092 3844 0.950836 CATCTGCACACCCGAAAACA 59.049 50.000 0.00 0.00 0.00 2.83
2093 3845 1.234821 TCATCTGCACACCCGAAAAC 58.765 50.000 0.00 0.00 0.00 2.43
2358 4110 3.980646 ATAACGCAAGCTTGTCAACAA 57.019 38.095 26.55 9.18 45.62 2.83
2361 4113 3.980646 ACAATAACGCAAGCTTGTCAA 57.019 38.095 26.55 11.20 45.62 3.18
2365 4117 4.975502 TGAAGAAACAATAACGCAAGCTTG 59.024 37.500 22.44 22.44 45.62 4.01
2366 4118 5.181690 TGAAGAAACAATAACGCAAGCTT 57.818 34.783 0.00 0.00 45.62 3.74
2481 4234 4.340617 AGACCAACTGTTTTGAAGACCAA 58.659 39.130 0.00 0.00 0.00 3.67
2482 4235 3.963129 AGACCAACTGTTTTGAAGACCA 58.037 40.909 0.00 0.00 0.00 4.02
2483 4236 4.157840 ACAAGACCAACTGTTTTGAAGACC 59.842 41.667 9.07 0.00 40.57 3.85
2484 4237 5.310720 ACAAGACCAACTGTTTTGAAGAC 57.689 39.130 9.07 0.00 40.57 3.01
2485 4238 7.479980 CAATACAAGACCAACTGTTTTGAAGA 58.520 34.615 9.07 0.00 40.57 2.87
2486 4239 6.198966 GCAATACAAGACCAACTGTTTTGAAG 59.801 38.462 9.07 0.00 40.57 3.02
2487 4240 6.039616 GCAATACAAGACCAACTGTTTTGAA 58.960 36.000 9.07 0.00 40.57 2.69
2488 4241 5.126222 TGCAATACAAGACCAACTGTTTTGA 59.874 36.000 9.07 0.00 40.57 2.69
2489 4242 5.231991 GTGCAATACAAGACCAACTGTTTTG 59.768 40.000 0.00 0.00 43.01 2.44
2490 4243 5.105554 TGTGCAATACAAGACCAACTGTTTT 60.106 36.000 0.00 0.00 36.06 2.43
2491 4244 4.400884 TGTGCAATACAAGACCAACTGTTT 59.599 37.500 0.00 0.00 36.06 2.83
2492 4245 3.951037 TGTGCAATACAAGACCAACTGTT 59.049 39.130 0.00 0.00 36.06 3.16
2493 4246 3.550820 TGTGCAATACAAGACCAACTGT 58.449 40.909 0.00 0.00 36.06 3.55
2494 4247 4.456911 AGATGTGCAATACAAGACCAACTG 59.543 41.667 0.00 0.00 43.77 3.16
2495 4248 4.655963 AGATGTGCAATACAAGACCAACT 58.344 39.130 0.00 0.00 43.77 3.16
2496 4249 5.182001 AGAAGATGTGCAATACAAGACCAAC 59.818 40.000 0.00 0.00 43.77 3.77
2615 4368 4.148838 ACAGATCTCCCTCCGATCTAAAG 58.851 47.826 0.00 0.00 44.22 1.85
2646 4400 9.449719 GCTAATGGCATATTACTTATGTACCTT 57.550 33.333 0.00 0.00 39.99 3.50
2679 4433 3.780850 AGACCCGGTCTCATAGGATTTTT 59.219 43.478 14.84 0.00 38.71 1.94
2680 4434 3.385115 AGACCCGGTCTCATAGGATTTT 58.615 45.455 14.84 0.00 38.71 1.82
2681 4435 3.047695 AGACCCGGTCTCATAGGATTT 57.952 47.619 14.84 0.00 38.71 2.17
2682 4436 2.777459 AGACCCGGTCTCATAGGATT 57.223 50.000 14.84 0.00 38.71 3.01
2691 4445 1.430992 TTGGAAAAGAGACCCGGTCT 58.569 50.000 20.58 20.58 46.42 3.85
2692 4446 2.491675 ATTGGAAAAGAGACCCGGTC 57.508 50.000 9.81 9.81 0.00 4.79
2712 4466 1.608336 CTGGGTGGGGTCTCACGTA 60.608 63.158 0.00 0.00 38.46 3.57
2725 4479 0.108041 ACACGTGTCGTTTTCTGGGT 60.108 50.000 17.22 0.00 38.32 4.51
2768 4522 1.499007 TGGGGATATCTTTGGGGAAGC 59.501 52.381 2.05 0.00 35.24 3.86
2791 4545 3.479006 CACGGTTTAAACAGATTGCTCG 58.521 45.455 22.77 14.60 0.00 5.03
2852 4606 3.521995 GCTGAAGCTGCACACTAGA 57.478 52.632 1.02 0.00 38.21 2.43
2920 4681 3.190874 GGAATAGAGCAGAAGTGGTTCG 58.809 50.000 0.00 0.00 37.79 3.95
2933 4694 5.812642 ACGATGCTGTAGTTTTGGAATAGAG 59.187 40.000 0.00 0.00 0.00 2.43
2938 4699 5.391523 GCAATACGATGCTGTAGTTTTGGAA 60.392 40.000 0.00 0.00 43.06 3.53
3004 4765 3.320826 AGGCTGGATGGTTTTTGTACAAC 59.679 43.478 8.07 0.00 0.00 3.32
3064 4825 4.806640 TTGATCACATCTCTGCAGTACA 57.193 40.909 14.67 0.00 0.00 2.90
3232 4993 6.628844 GCTTTACATCTCTGCCAAATTTCCAT 60.629 38.462 0.00 0.00 0.00 3.41
3236 4997 5.990120 AGCTTTACATCTCTGCCAAATTT 57.010 34.783 0.00 0.00 0.00 1.82
3251 5012 4.940654 AGCATCTTCTTCTCCAAGCTTTAC 59.059 41.667 0.00 0.00 0.00 2.01
3293 5054 0.881118 CCACCCAGAAAATGACACGG 59.119 55.000 0.00 0.00 0.00 4.94
3454 5215 6.151648 CACAAAGTTCATCATACAGAACCCAT 59.848 38.462 0.00 0.00 43.89 4.00
3693 5455 6.256757 GGTGTCAGGAAAGATCTAAATCGAAG 59.743 42.308 0.00 0.00 36.97 3.79
3901 5663 5.500290 CGGCAGTAAAATCAACGACAGATAC 60.500 44.000 0.00 0.00 0.00 2.24
3941 5703 9.490379 CATCACAAAGAAGATCTCATGATATCA 57.510 33.333 19.80 8.10 32.19 2.15
3950 5712 7.856145 ATGTAACCATCACAAAGAAGATCTC 57.144 36.000 0.00 0.00 0.00 2.75
3978 5740 8.243289 AGAATGCAGCAAAAACAAATATGTAC 57.757 30.769 0.00 0.00 39.40 2.90
3981 5743 7.396419 GCTAGAATGCAGCAAAAACAAATATG 58.604 34.615 0.00 0.00 38.93 1.78
4214 5976 4.618927 GCACACAATACATGCCATGACTTT 60.619 41.667 12.53 0.00 33.06 2.66
4234 5996 4.268405 CACTTCCACAAAAACAATCAGCAC 59.732 41.667 0.00 0.00 0.00 4.40
4255 6017 7.201732 CCATTTACAGGATAGAATGAACCACAC 60.202 40.741 0.00 0.00 32.61 3.82
4416 6179 9.388506 AGATGAATAAAGAGTGTTCTGTTATGG 57.611 33.333 0.00 0.00 32.79 2.74
4721 6484 1.532868 CAGTCACCAAGTAGCAACTGC 59.467 52.381 0.00 0.00 42.49 4.40
4747 6510 3.143728 CATGCAATGCAGTATAGCTCCA 58.856 45.455 14.98 0.00 43.65 3.86
4995 6772 5.362263 TGAAGTTACAGTCAACTTACCCAC 58.638 41.667 1.47 0.00 46.23 4.61
5102 6881 2.675844 TGGCATTATTCGTTCAGAACCG 59.324 45.455 7.76 3.56 42.39 4.44
5388 7168 7.396339 TGCCTAGTAAACTGAAGAACTCTATGA 59.604 37.037 0.00 0.00 0.00 2.15
5411 7191 3.328505 CCAAGGTCAAACAAATCATGCC 58.671 45.455 0.00 0.00 0.00 4.40
5414 7194 3.966665 ACACCCAAGGTCAAACAAATCAT 59.033 39.130 0.00 0.00 31.02 2.45
5415 7195 3.370104 ACACCCAAGGTCAAACAAATCA 58.630 40.909 0.00 0.00 31.02 2.57
5416 7196 5.469479 CATACACCCAAGGTCAAACAAATC 58.531 41.667 0.00 0.00 31.02 2.17
5417 7197 4.262420 GCATACACCCAAGGTCAAACAAAT 60.262 41.667 0.00 0.00 31.02 2.32
5418 7198 3.068873 GCATACACCCAAGGTCAAACAAA 59.931 43.478 0.00 0.00 31.02 2.83
5419 7199 2.625790 GCATACACCCAAGGTCAAACAA 59.374 45.455 0.00 0.00 31.02 2.83
5420 7200 2.235016 GCATACACCCAAGGTCAAACA 58.765 47.619 0.00 0.00 31.02 2.83
5421 7201 1.544246 GGCATACACCCAAGGTCAAAC 59.456 52.381 0.00 0.00 31.02 2.93
5422 7202 1.145945 TGGCATACACCCAAGGTCAAA 59.854 47.619 0.00 0.00 31.02 2.69
5423 7203 0.774276 TGGCATACACCCAAGGTCAA 59.226 50.000 0.00 0.00 31.02 3.18
5424 7204 0.998928 ATGGCATACACCCAAGGTCA 59.001 50.000 0.00 0.00 35.67 4.02
5425 7205 1.340991 ACATGGCATACACCCAAGGTC 60.341 52.381 0.00 0.00 35.67 3.85
5426 7206 0.704076 ACATGGCATACACCCAAGGT 59.296 50.000 0.00 0.00 35.67 3.50
5427 7207 1.105457 CACATGGCATACACCCAAGG 58.895 55.000 0.00 0.00 35.67 3.61
5428 7208 1.473677 CACACATGGCATACACCCAAG 59.526 52.381 0.00 0.00 35.67 3.61
5429 7209 1.543607 CACACATGGCATACACCCAA 58.456 50.000 0.00 0.00 35.67 4.12
5430 7210 0.323269 CCACACATGGCATACACCCA 60.323 55.000 0.00 0.00 39.82 4.51
5431 7211 2.492418 CCACACATGGCATACACCC 58.508 57.895 0.00 0.00 39.82 4.61
5441 7221 1.473677 CAAGGGCATACACCACACATG 59.526 52.381 0.00 0.00 0.00 3.21
5442 7222 1.838112 CAAGGGCATACACCACACAT 58.162 50.000 0.00 0.00 0.00 3.21
5443 7223 0.893270 GCAAGGGCATACACCACACA 60.893 55.000 0.00 0.00 40.72 3.72
5444 7224 1.883021 GCAAGGGCATACACCACAC 59.117 57.895 0.00 0.00 40.72 3.82
5445 7225 4.413928 GCAAGGGCATACACCACA 57.586 55.556 0.00 0.00 40.72 4.17
5455 7235 4.016838 TTGCTGGTATGCAAGGGC 57.983 55.556 0.00 0.00 46.43 5.19
5460 7240 0.894642 TGCTTGCTTGCTGGTATGCA 60.895 50.000 0.00 0.00 41.65 3.96
5487 7267 2.975732 TCATCCATGACTCTCTGTGC 57.024 50.000 0.00 0.00 0.00 4.57
5661 7548 9.249457 CTCAAATATAAGAGCGTTTAGATCACA 57.751 33.333 0.00 0.00 37.82 3.58
5671 7558 7.378995 GTGACGATTACTCAAATATAAGAGCGT 59.621 37.037 0.00 0.00 35.28 5.07
5771 7677 1.346722 AGGCTAACTGTACACACCACC 59.653 52.381 0.00 0.00 0.00 4.61
5788 7694 7.661437 TCATTGTTGTATATAATCCAGACAGGC 59.339 37.037 0.00 0.00 37.29 4.85
5864 7770 7.062322 AGGTGCAAATATCATCTTTACCATCA 58.938 34.615 0.00 0.00 0.00 3.07
5869 7775 5.979517 GCCAAGGTGCAAATATCATCTTTAC 59.020 40.000 0.00 0.00 32.96 2.01
5947 7853 3.981211 ACACGCTTGATTTTTGATTGCT 58.019 36.364 0.00 0.00 0.00 3.91
5950 7856 4.481930 TCGACACGCTTGATTTTTGATT 57.518 36.364 0.00 0.00 0.00 2.57
5951 7857 4.083324 ACATCGACACGCTTGATTTTTGAT 60.083 37.500 0.00 0.00 0.00 2.57
5952 7858 3.249799 ACATCGACACGCTTGATTTTTGA 59.750 39.130 0.00 0.00 0.00 2.69
5953 7859 3.554524 ACATCGACACGCTTGATTTTTG 58.445 40.909 0.00 0.00 0.00 2.44
5954 7860 3.896648 ACATCGACACGCTTGATTTTT 57.103 38.095 0.00 0.00 0.00 1.94
5955 7861 3.896648 AACATCGACACGCTTGATTTT 57.103 38.095 0.00 0.00 0.00 1.82
5956 7862 3.896648 AAACATCGACACGCTTGATTT 57.103 38.095 0.00 0.00 0.00 2.17
5988 7894 8.590719 TCAACACAAAACTATTACATCACGTA 57.409 30.769 0.00 0.00 0.00 3.57
5990 7896 8.948853 ATTCAACACAAAACTATTACATCACG 57.051 30.769 0.00 0.00 0.00 4.35
6000 7906 9.796120 CCACTTCTAAAATTCAACACAAAACTA 57.204 29.630 0.00 0.00 0.00 2.24
6012 7918 8.992835 AAATGAGAATGCCACTTCTAAAATTC 57.007 30.769 0.00 0.00 35.63 2.17
6030 7936 5.774690 AGGGTTAATTGCAGTGAAAATGAGA 59.225 36.000 0.00 0.00 30.28 3.27
6039 7945 6.866480 ACAATATTCAGGGTTAATTGCAGTG 58.134 36.000 0.00 0.00 32.10 3.66
6065 7971 1.047801 AAATATTTGCCGGCCCATCC 58.952 50.000 26.77 0.00 0.00 3.51
6068 7974 2.092103 ACTCTAAATATTTGCCGGCCCA 60.092 45.455 26.77 11.16 0.00 5.36
6069 7975 2.583143 ACTCTAAATATTTGCCGGCCC 58.417 47.619 26.77 0.00 0.00 5.80
6072 7978 7.687941 ATATGGAACTCTAAATATTTGCCGG 57.312 36.000 11.05 0.00 0.00 6.13
6154 8061 8.454106 CAATGTCTTATTTGGACCTAACTTCTG 58.546 37.037 0.00 0.00 33.22 3.02
6157 8064 6.663523 CCCAATGTCTTATTTGGACCTAACTT 59.336 38.462 3.32 0.00 44.23 2.66
6170 8077 1.852965 CCCCAGACCCCAATGTCTTAT 59.147 52.381 0.00 0.00 42.92 1.73
6185 8092 1.275010 GGCAAACAACCATTACCCCAG 59.725 52.381 0.00 0.00 0.00 4.45
6228 8135 5.201713 TCATCTAGATAAACTTGAGGCCG 57.798 43.478 4.54 0.00 33.66 6.13
6290 8197 1.076632 AAACCCCGACTGCACCAAA 60.077 52.632 0.00 0.00 0.00 3.28
6291 8198 1.527380 GAAACCCCGACTGCACCAA 60.527 57.895 0.00 0.00 0.00 3.67
6293 8200 3.047877 CGAAACCCCGACTGCACC 61.048 66.667 0.00 0.00 0.00 5.01
6304 8211 3.741476 CTGCTGCAGGGCGAAACC 61.741 66.667 21.71 0.00 37.93 3.27
6328 8235 2.125952 TGCAGGTGCTCGTCATCG 60.126 61.111 3.18 0.00 42.66 3.84
6364 8271 1.446272 GGGGAGAGCGAGTTCAACG 60.446 63.158 0.00 0.00 0.00 4.10
6374 8281 1.962321 GAGACGGGAAAGGGGAGAGC 61.962 65.000 0.00 0.00 0.00 4.09
6390 8297 2.834549 GTCCATGACCAGAGAAAGGAGA 59.165 50.000 0.00 0.00 0.00 3.71
6406 8313 7.279615 TGAATAACGGAAATACATCTGTCCAT 58.720 34.615 0.00 0.00 37.96 3.41
6472 8379 2.753452 CCATGGGCATGATATCAGAAGC 59.247 50.000 11.78 13.96 41.20 3.86
6567 8544 4.161754 ACTTGTATTTAGGAACGGAGGGAG 59.838 45.833 0.00 0.00 0.00 4.30
6568 8545 4.098894 ACTTGTATTTAGGAACGGAGGGA 58.901 43.478 0.00 0.00 0.00 4.20
6569 8546 4.161754 AGACTTGTATTTAGGAACGGAGGG 59.838 45.833 0.00 0.00 0.00 4.30
6570 8547 5.340439 AGACTTGTATTTAGGAACGGAGG 57.660 43.478 0.00 0.00 0.00 4.30
6571 8548 7.668525 AAAAGACTTGTATTTAGGAACGGAG 57.331 36.000 0.00 0.00 0.00 4.63
6573 8550 9.211485 TCTTAAAAGACTTGTATTTAGGAACGG 57.789 33.333 0.00 0.00 0.00 4.44
6596 8573 9.221933 CGTATGTAGTCTATAGTGGAATCTCTT 57.778 37.037 0.00 0.00 0.00 2.85
6597 8574 7.825270 CCGTATGTAGTCTATAGTGGAATCTCT 59.175 40.741 0.00 0.00 0.00 3.10
6598 8575 7.823310 TCCGTATGTAGTCTATAGTGGAATCTC 59.177 40.741 0.00 0.00 0.00 2.75
6599 8576 7.687388 TCCGTATGTAGTCTATAGTGGAATCT 58.313 38.462 0.00 0.00 0.00 2.40
6603 8580 5.221783 TGCTCCGTATGTAGTCTATAGTGGA 60.222 44.000 0.00 0.00 0.00 4.02
6604 8581 5.001874 TGCTCCGTATGTAGTCTATAGTGG 58.998 45.833 0.00 0.00 0.00 4.00
6605 8582 6.555812 TTGCTCCGTATGTAGTCTATAGTG 57.444 41.667 0.00 0.00 0.00 2.74
6608 8585 8.173542 TCATTTTGCTCCGTATGTAGTCTATA 57.826 34.615 0.00 0.00 0.00 1.31
6609 8586 7.050970 TCATTTTGCTCCGTATGTAGTCTAT 57.949 36.000 0.00 0.00 0.00 1.98
6610 8587 6.096423 ACTCATTTTGCTCCGTATGTAGTCTA 59.904 38.462 0.00 0.00 0.00 2.59
6611 8588 5.105310 ACTCATTTTGCTCCGTATGTAGTCT 60.105 40.000 0.00 0.00 0.00 3.24
6612 8589 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
6615 8592 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
6616 8593 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
6618 8595 4.579869 AGTTCACTCATTTTGCTCCGTAT 58.420 39.130 0.00 0.00 0.00 3.06
6619 8596 4.002906 AGTTCACTCATTTTGCTCCGTA 57.997 40.909 0.00 0.00 0.00 4.02
6621 8598 3.904136 AAGTTCACTCATTTTGCTCCG 57.096 42.857 0.00 0.00 0.00 4.63
6622 8599 7.550906 AGAGTATAAGTTCACTCATTTTGCTCC 59.449 37.037 16.02 0.00 42.99 4.70
6623 8600 8.485976 AGAGTATAAGTTCACTCATTTTGCTC 57.514 34.615 16.02 0.00 42.99 4.26
6624 8601 9.944376 TTAGAGTATAAGTTCACTCATTTTGCT 57.056 29.630 16.02 1.53 42.99 3.91
6629 8606 9.384764 GCCTTTTAGAGTATAAGTTCACTCATT 57.615 33.333 16.02 3.65 42.99 2.57
6630 8607 7.707035 CGCCTTTTAGAGTATAAGTTCACTCAT 59.293 37.037 16.02 7.20 42.99 2.90
6631 8608 7.033791 CGCCTTTTAGAGTATAAGTTCACTCA 58.966 38.462 16.02 4.12 42.99 3.41
6632 8609 7.034397 ACGCCTTTTAGAGTATAAGTTCACTC 58.966 38.462 8.76 8.76 41.25 3.51
6633 8610 6.932947 ACGCCTTTTAGAGTATAAGTTCACT 58.067 36.000 0.00 0.00 0.00 3.41
6634 8611 7.034397 AGACGCCTTTTAGAGTATAAGTTCAC 58.966 38.462 0.00 0.00 0.00 3.18
6635 8612 7.166691 AGACGCCTTTTAGAGTATAAGTTCA 57.833 36.000 0.00 0.00 0.00 3.18
6643 8620 8.954350 GGATGTATATAGACGCCTTTTAGAGTA 58.046 37.037 2.86 0.00 0.00 2.59
6644 8621 7.361885 CGGATGTATATAGACGCCTTTTAGAGT 60.362 40.741 7.38 0.00 0.00 3.24
6645 8622 6.967767 CGGATGTATATAGACGCCTTTTAGAG 59.032 42.308 7.38 0.00 0.00 2.43
6646 8623 6.656270 TCGGATGTATATAGACGCCTTTTAGA 59.344 38.462 7.38 0.00 0.00 2.10
6647 8624 6.849502 TCGGATGTATATAGACGCCTTTTAG 58.150 40.000 7.38 0.00 0.00 1.85
6648 8625 6.822667 TCGGATGTATATAGACGCCTTTTA 57.177 37.500 7.38 0.00 0.00 1.52
6649 8626 5.717078 TCGGATGTATATAGACGCCTTTT 57.283 39.130 7.38 0.00 0.00 2.27
6650 8627 5.717078 TTCGGATGTATATAGACGCCTTT 57.283 39.130 7.38 0.00 0.00 3.11
6651 8628 5.185249 ACATTCGGATGTATATAGACGCCTT 59.815 40.000 7.81 0.00 44.51 4.35
6652 8629 4.705507 ACATTCGGATGTATATAGACGCCT 59.294 41.667 7.81 0.00 44.51 5.52
6653 8630 4.995124 ACATTCGGATGTATATAGACGCC 58.005 43.478 7.81 0.00 44.51 5.68
6654 8631 6.783162 ACTACATTCGGATGTATATAGACGC 58.217 40.000 16.89 0.00 45.20 5.19
6655 8632 8.199176 AGACTACATTCGGATGTATATAGACG 57.801 38.462 16.89 6.27 45.20 4.18
6656 8633 9.386010 AGAGACTACATTCGGATGTATATAGAC 57.614 37.037 16.89 7.71 45.20 2.59
6662 8639 9.168451 CACTATAGAGACTACATTCGGATGTAT 57.832 37.037 16.89 7.61 45.20 2.29
6663 8640 8.155510 ACACTATAGAGACTACATTCGGATGTA 58.844 37.037 15.76 15.76 44.51 2.29
6665 8642 7.301789 CACACTATAGAGACTACATTCGGATG 58.698 42.308 6.78 0.88 39.25 3.51
6666 8643 6.431543 CCACACTATAGAGACTACATTCGGAT 59.568 42.308 6.78 0.00 0.00 4.18
6667 8644 5.763698 CCACACTATAGAGACTACATTCGGA 59.236 44.000 6.78 0.00 0.00 4.55
6668 8645 5.763698 TCCACACTATAGAGACTACATTCGG 59.236 44.000 6.78 0.00 0.00 4.30
6669 8646 6.862711 TCCACACTATAGAGACTACATTCG 57.137 41.667 6.78 0.00 0.00 3.34
6670 8647 9.073475 AGATTCCACACTATAGAGACTACATTC 57.927 37.037 6.78 0.00 0.00 2.67
6671 8648 9.073475 GAGATTCCACACTATAGAGACTACATT 57.927 37.037 6.78 0.00 0.00 2.71
6672 8649 8.444783 AGAGATTCCACACTATAGAGACTACAT 58.555 37.037 6.78 0.00 0.00 2.29
6673 8650 7.807198 AGAGATTCCACACTATAGAGACTACA 58.193 38.462 6.78 0.00 0.00 2.74
6674 8651 9.431887 CTAGAGATTCCACACTATAGAGACTAC 57.568 40.741 6.78 0.00 31.98 2.73
6675 8652 9.382307 TCTAGAGATTCCACACTATAGAGACTA 57.618 37.037 6.78 0.00 33.80 2.59
6676 8653 8.270137 TCTAGAGATTCCACACTATAGAGACT 57.730 38.462 6.78 0.00 33.80 3.24
6677 8654 8.911918 TTCTAGAGATTCCACACTATAGAGAC 57.088 38.462 6.78 0.00 37.92 3.36
6678 8655 8.160765 CCTTCTAGAGATTCCACACTATAGAGA 58.839 40.741 6.78 0.00 37.92 3.10
6679 8656 8.160765 TCCTTCTAGAGATTCCACACTATAGAG 58.839 40.741 6.78 0.31 37.92 2.43
6680 8657 7.940137 GTCCTTCTAGAGATTCCACACTATAGA 59.060 40.741 6.78 0.00 35.90 1.98
6681 8658 7.942341 AGTCCTTCTAGAGATTCCACACTATAG 59.058 40.741 0.00 0.00 31.69 1.31
6682 8659 7.817440 AGTCCTTCTAGAGATTCCACACTATA 58.183 38.462 0.00 0.00 0.00 1.31
6683 8660 6.678547 AGTCCTTCTAGAGATTCCACACTAT 58.321 40.000 0.00 0.00 0.00 2.12
6684 8661 6.080969 AGTCCTTCTAGAGATTCCACACTA 57.919 41.667 0.00 0.00 0.00 2.74
6685 8662 4.941713 AGTCCTTCTAGAGATTCCACACT 58.058 43.478 0.00 0.00 0.00 3.55
6686 8663 5.669164 AAGTCCTTCTAGAGATTCCACAC 57.331 43.478 0.00 0.00 0.00 3.82
6687 8664 9.661954 AATATAAGTCCTTCTAGAGATTCCACA 57.338 33.333 0.00 0.00 0.00 4.17
6699 8676 8.929487 CCTCTGTTCCTAAATATAAGTCCTTCT 58.071 37.037 0.00 0.00 0.00 2.85
6700 8677 8.151596 CCCTCTGTTCCTAAATATAAGTCCTTC 58.848 40.741 0.00 0.00 0.00 3.46
6701 8678 7.849904 TCCCTCTGTTCCTAAATATAAGTCCTT 59.150 37.037 0.00 0.00 0.00 3.36
6702 8679 7.371043 TCCCTCTGTTCCTAAATATAAGTCCT 58.629 38.462 0.00 0.00 0.00 3.85
6703 8680 7.613551 TCCCTCTGTTCCTAAATATAAGTCC 57.386 40.000 0.00 0.00 0.00 3.85
6755 8732 7.325694 AGGTTCCATGTTTGATCATCAATTTC 58.674 34.615 0.00 0.00 36.11 2.17
6756 8733 7.179694 AGAGGTTCCATGTTTGATCATCAATTT 59.820 33.333 0.00 0.00 36.11 1.82
6757 8734 6.666546 AGAGGTTCCATGTTTGATCATCAATT 59.333 34.615 0.00 0.00 36.11 2.32
7071 9052 0.030235 ATAGCGCACATGCTTGCATG 59.970 50.000 27.64 27.64 44.46 4.06
7087 9068 5.039920 TCCATCCAAAGTCATGGTCATAG 57.960 43.478 0.00 0.00 40.59 2.23
7143 9139 5.423015 TGATTGTTCTATCAGGAAGTCTGC 58.577 41.667 0.00 0.00 43.06 4.26
7206 9202 6.656945 GCATGAGCAACAGAAAGATATACTG 58.343 40.000 0.00 0.00 41.58 2.74
7290 9304 0.586319 ATGAACAAACAGTCGCACCG 59.414 50.000 0.00 0.00 0.00 4.94
7383 9397 0.445436 CAGGCTCGCAGTAAAAGCTG 59.555 55.000 0.00 0.00 39.37 4.24
7498 9512 2.867109 ACTCTGTGGGGAACAAGATG 57.133 50.000 0.00 0.00 38.67 2.90
7687 9775 1.146982 AGCAACCATTACCCCACAACT 59.853 47.619 0.00 0.00 0.00 3.16
7749 9837 7.545362 AATATAGTTTCAGTCACACATGAGC 57.455 36.000 0.00 0.00 34.75 4.26
7899 9987 1.021390 GTGTCGCAATCCAGACCCTG 61.021 60.000 0.00 0.00 36.61 4.45
7997 10085 4.611825 ACCCTAGGTAGTGCGAGAAGCT 62.612 54.545 8.29 0.00 39.82 3.74
7998 10086 2.295650 ACCCTAGGTAGTGCGAGAAGC 61.296 57.143 8.29 0.00 39.63 3.86
7999 10087 1.405821 CACCCTAGGTAGTGCGAGAAG 59.594 57.143 8.29 0.00 32.11 2.85
8000 10088 1.471119 CACCCTAGGTAGTGCGAGAA 58.529 55.000 8.29 0.00 32.11 2.87
8001 10089 0.395311 CCACCCTAGGTAGTGCGAGA 60.395 60.000 8.29 0.00 32.11 4.04
8002 10090 1.392710 CCCACCCTAGGTAGTGCGAG 61.393 65.000 8.29 0.00 32.11 5.03
8003 10091 1.380785 CCCACCCTAGGTAGTGCGA 60.381 63.158 8.29 0.00 32.11 5.10
8004 10092 3.090219 GCCCACCCTAGGTAGTGCG 62.090 68.421 8.29 3.35 32.11 5.34
8005 10093 0.398098 TAGCCCACCCTAGGTAGTGC 60.398 60.000 8.29 5.28 32.11 4.40
8006 10094 1.705873 CTAGCCCACCCTAGGTAGTG 58.294 60.000 8.29 9.52 32.11 2.74
8007 10095 0.105607 GCTAGCCCACCCTAGGTAGT 60.106 60.000 8.29 0.00 36.64 2.73
8008 10096 0.188834 AGCTAGCCCACCCTAGGTAG 59.811 60.000 12.13 2.76 42.53 3.18
8009 10097 0.187851 GAGCTAGCCCACCCTAGGTA 59.812 60.000 12.13 0.00 43.88 3.08
8010 10098 1.075151 GAGCTAGCCCACCCTAGGT 60.075 63.158 12.13 1.00 45.82 3.08
8011 10099 1.075226 TGAGCTAGCCCACCCTAGG 60.075 63.158 12.13 0.06 36.23 3.02
8012 10100 2.435418 CTGAGCTAGCCCACCCTAG 58.565 63.158 12.13 0.00 38.24 3.02
8013 10101 4.707584 CTGAGCTAGCCCACCCTA 57.292 61.111 12.13 0.00 0.00 3.53
8216 10305 2.885616 ACGGTTTCAGAGGTCCTCTTA 58.114 47.619 19.46 8.83 38.99 2.10
8257 10346 2.267961 GGTACAGAGCAACGGGGG 59.732 66.667 0.00 0.00 0.00 5.40
8258 10347 2.267961 GGGTACAGAGCAACGGGG 59.732 66.667 0.00 0.00 0.00 5.73
8331 10432 3.181464 GCAGGTAAAGTCTCCTATCACCC 60.181 52.174 0.00 0.00 32.26 4.61
8343 10444 4.022849 GCTGTTGATTTGAGCAGGTAAAGT 60.023 41.667 0.00 0.00 32.70 2.66
8348 10451 1.884579 CAGCTGTTGATTTGAGCAGGT 59.115 47.619 5.25 0.00 39.83 4.00
8550 10654 8.896744 TGGATCAGTCAAAAGATAAGCAATAAG 58.103 33.333 0.00 0.00 0.00 1.73
8657 10769 5.600262 GTTTTCGAAACTTTTTCTCCGTG 57.400 39.130 10.79 0.00 0.00 4.94
8685 10797 2.032549 GCGCTCAACACATGATGTATCC 60.033 50.000 0.00 0.00 42.31 2.59
8697 10809 1.225855 AAAAGACATCGCGCTCAACA 58.774 45.000 5.56 0.00 0.00 3.33
8709 10983 4.320202 GCGACAAAGATAGCCAAAAAGACA 60.320 41.667 0.00 0.00 0.00 3.41
8714 10988 3.407698 TCTGCGACAAAGATAGCCAAAA 58.592 40.909 0.00 0.00 0.00 2.44
8717 10991 2.938451 CAATCTGCGACAAAGATAGCCA 59.062 45.455 0.00 0.00 33.17 4.75
8734 11008 1.393539 CGACCAACGTGGATCACAATC 59.606 52.381 10.46 0.00 40.96 2.67
8739 11013 1.252215 TAGGCGACCAACGTGGATCA 61.252 55.000 10.46 0.00 40.96 2.92
8741 11015 1.217244 GTAGGCGACCAACGTGGAT 59.783 57.895 10.46 0.00 40.96 3.41
8742 11016 2.652530 GTAGGCGACCAACGTGGA 59.347 61.111 10.46 0.00 40.96 4.02
8746 11020 0.734942 ATCAACGTAGGCGACCAACG 60.735 55.000 11.87 11.87 43.59 4.10
8747 11021 0.719465 CATCAACGTAGGCGACCAAC 59.281 55.000 0.00 0.00 42.00 3.77
8750 11024 0.454600 TCTCATCAACGTAGGCGACC 59.545 55.000 0.00 0.00 42.00 4.79
8751 11025 2.120232 CATCTCATCAACGTAGGCGAC 58.880 52.381 0.00 0.00 42.00 5.19
8753 11027 0.855349 GCATCTCATCAACGTAGGCG 59.145 55.000 0.00 0.00 44.93 5.52
8754 11028 1.221414 GGCATCTCATCAACGTAGGC 58.779 55.000 0.00 0.00 0.00 3.93
8755 11029 1.138859 TGGGCATCTCATCAACGTAGG 59.861 52.381 0.00 0.00 0.00 3.18
8756 11030 2.477825 CTGGGCATCTCATCAACGTAG 58.522 52.381 0.00 0.00 0.00 3.51
8758 11032 0.745845 GCTGGGCATCTCATCAACGT 60.746 55.000 0.00 0.00 0.00 3.99
8759 11033 1.442526 GGCTGGGCATCTCATCAACG 61.443 60.000 0.00 0.00 0.00 4.10
8760 11034 0.106819 AGGCTGGGCATCTCATCAAC 60.107 55.000 0.00 0.00 0.00 3.18
8789 13288 0.960364 ACTTGTTAGGCGGTGCATGG 60.960 55.000 0.00 0.00 0.00 3.66
8790 13289 0.168788 CACTTGTTAGGCGGTGCATG 59.831 55.000 0.00 0.00 0.00 4.06
8791 13290 0.960364 CCACTTGTTAGGCGGTGCAT 60.960 55.000 0.00 0.00 0.00 3.96
8792 13291 1.599518 CCACTTGTTAGGCGGTGCA 60.600 57.895 0.00 0.00 0.00 4.57
8793 13292 2.332654 CCCACTTGTTAGGCGGTGC 61.333 63.158 0.00 0.00 0.00 5.01
8794 13293 0.953960 GACCCACTTGTTAGGCGGTG 60.954 60.000 0.00 0.00 29.76 4.94
8799 13298 1.298859 GCAGCGACCCACTTGTTAGG 61.299 60.000 0.00 0.00 0.00 2.69
8811 13310 0.937304 TTTCAGTTGACAGCAGCGAC 59.063 50.000 0.00 0.00 0.00 5.19
8840 13341 2.783828 CAGTTACTGGATCGAGCGAT 57.216 50.000 4.14 4.89 37.59 4.58
8859 13360 2.556622 ACGGTTGTTTCATCATGAACCC 59.443 45.455 0.00 0.00 35.89 4.11
8879 13380 7.331193 CACACTACTCAAAATACTGGGACTTAC 59.669 40.741 0.00 0.00 0.00 2.34
8880 13381 7.383687 CACACTACTCAAAATACTGGGACTTA 58.616 38.462 0.00 0.00 0.00 2.24
8889 13390 5.407387 TCGGAAAGCACACTACTCAAAATAC 59.593 40.000 0.00 0.00 0.00 1.89
8898 13399 1.654105 CGTGATCGGAAAGCACACTAC 59.346 52.381 0.00 0.00 32.96 2.73
8900 13401 0.317160 TCGTGATCGGAAAGCACACT 59.683 50.000 0.00 0.00 37.69 3.55
8904 13405 1.872388 TGTTTCGTGATCGGAAAGCA 58.128 45.000 10.89 9.61 36.25 3.91
8927 13428 3.674997 TCCCACTCTCTTTTGTGTATGC 58.325 45.455 0.00 0.00 32.76 3.14
8934 13435 8.792830 TTCAAGTTATATCCCACTCTCTTTTG 57.207 34.615 0.00 0.00 0.00 2.44


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.