Multiple sequence alignment - TraesCS6A01G122600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G122600 chr6A 100.000 4462 0 0 1 4462 96433703 96429242 0.000000e+00 8240
1 TraesCS6A01G122600 chr6A 90.870 920 57 8 1 893 479911884 479910965 0.000000e+00 1208
2 TraesCS6A01G122600 chr6D 94.147 1606 54 7 2091 3692 79711742 79710173 0.000000e+00 2409
3 TraesCS6A01G122600 chr6D 90.767 769 47 6 1201 1947 79712513 79711747 0.000000e+00 1005
4 TraesCS6A01G122600 chr6D 85.627 654 87 7 3694 4344 300069976 300069327 0.000000e+00 680
5 TraesCS6A01G122600 chr6D 88.439 173 18 2 896 1067 79713963 79713792 1.630000e-49 207
6 TraesCS6A01G122600 chr6B 94.584 1237 58 3 2113 3341 152016547 152015312 0.000000e+00 1905
7 TraesCS6A01G122600 chr6B 89.674 920 61 15 896 1789 152017482 152016571 0.000000e+00 1142
8 TraesCS6A01G122600 chr6B 84.774 486 52 13 2347 2816 151920532 151920053 6.760000e-128 468
9 TraesCS6A01G122600 chr6B 89.783 323 24 2 3388 3701 152015314 152014992 5.370000e-109 405
10 TraesCS6A01G122600 chr6B 77.578 446 49 13 3262 3683 151907696 151907278 5.810000e-54 222
11 TraesCS6A01G122600 chr1D 91.957 920 47 10 1 893 421085987 421085068 0.000000e+00 1264
12 TraesCS6A01G122600 chr1D 90.988 921 56 10 1 894 423894125 423895045 0.000000e+00 1216
13 TraesCS6A01G122600 chr1D 84.830 646 90 8 3694 4336 383916698 383917338 1.050000e-180 643
14 TraesCS6A01G122600 chr3D 91.485 916 53 9 1 894 479623503 479624415 0.000000e+00 1236
15 TraesCS6A01G122600 chr3D 90.554 921 60 10 1 894 5430682 5429762 0.000000e+00 1194
16 TraesCS6A01G122600 chr3D 85.833 120 14 2 4342 4459 515605576 515605458 1.690000e-24 124
17 TraesCS6A01G122600 chr3D 85.833 120 10 5 4344 4459 418420470 418420586 2.180000e-23 121
18 TraesCS6A01G122600 chr7D 91.323 922 50 13 1 894 98405521 98404602 0.000000e+00 1232
19 TraesCS6A01G122600 chr7D 93.151 146 10 0 1949 2094 40033466 40033611 9.720000e-52 215
20 TraesCS6A01G122600 chr7D 89.796 147 15 0 1946 2092 587164058 587164204 5.890000e-44 189
21 TraesCS6A01G122600 chr4D 91.196 920 54 9 1 893 504271109 504272028 0.000000e+00 1225
22 TraesCS6A01G122600 chr4D 90.368 924 55 16 1 893 466290143 466291063 0.000000e+00 1182
23 TraesCS6A01G122600 chr4D 87.191 648 81 2 3698 4344 72530842 72531488 0.000000e+00 736
24 TraesCS6A01G122600 chr2A 90.771 921 58 9 1 894 68889576 68888656 0.000000e+00 1205
25 TraesCS6A01G122600 chr2A 89.902 921 64 12 1 893 768286232 768285313 0.000000e+00 1158
26 TraesCS6A01G122600 chr2A 90.141 142 13 1 1955 2096 606508187 606508047 2.740000e-42 183
27 TraesCS6A01G122600 chr2A 85.088 114 17 0 1946 2059 101022791 101022904 2.820000e-22 117
28 TraesCS6A01G122600 chr5D 90.830 916 56 10 1 893 424048273 424047363 0.000000e+00 1201
29 TraesCS6A01G122600 chr5D 85.000 120 16 1 4341 4458 545440669 545440550 2.180000e-23 121
30 TraesCS6A01G122600 chr5D 87.037 108 11 2 4353 4458 536021193 536021087 7.840000e-23 119
31 TraesCS6A01G122600 chr7A 90.819 904 72 6 1 893 527989287 527990190 0.000000e+00 1199
32 TraesCS6A01G122600 chr7A 85.714 119 13 4 4343 4459 538768047 538767931 6.060000e-24 122
33 TraesCS6A01G122600 chr7A 85.217 115 14 2 4346 4458 552558536 552558423 1.010000e-21 115
34 TraesCS6A01G122600 chr7A 79.452 146 28 2 1948 2092 424634952 424635096 7.900000e-18 102
35 TraesCS6A01G122600 chr2D 90.323 930 55 15 1 897 644389597 644390524 0.000000e+00 1186
36 TraesCS6A01G122600 chr2B 87.289 653 76 7 3694 4344 146930444 146929797 0.000000e+00 739
37 TraesCS6A01G122600 chr2B 87.037 648 80 4 3699 4344 146952335 146951690 0.000000e+00 728
38 TraesCS6A01G122600 chr2B 85.538 650 83 10 3699 4344 776916229 776916871 0.000000e+00 669
39 TraesCS6A01G122600 chr2B 85.965 114 13 2 4347 4458 637943617 637943729 7.840000e-23 119
40 TraesCS6A01G122600 chr1B 86.503 652 86 2 3694 4344 13657749 13658399 0.000000e+00 715
41 TraesCS6A01G122600 chr5B 86.503 652 84 3 3694 4344 542439619 542438971 0.000000e+00 713
42 TraesCS6A01G122600 chr5B 85.345 116 14 2 4346 4459 470315886 470315772 2.820000e-22 117
43 TraesCS6A01G122600 chrUn 84.627 657 99 2 3689 4344 49503197 49503852 0.000000e+00 652
44 TraesCS6A01G122600 chr1A 86.486 148 11 2 1945 2092 568041464 568041602 2.150000e-33 154
45 TraesCS6A01G122600 chr3A 86.441 118 7 5 4344 4458 690343237 690343348 2.180000e-23 121
46 TraesCS6A01G122600 chr5A 85.088 114 16 1 1946 2059 32933494 32933382 1.010000e-21 115


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G122600 chr6A 96429242 96433703 4461 True 8240.000000 8240 100.000000 1 4462 1 chr6A.!!$R1 4461
1 TraesCS6A01G122600 chr6A 479910965 479911884 919 True 1208.000000 1208 90.870000 1 893 1 chr6A.!!$R2 892
2 TraesCS6A01G122600 chr6D 79710173 79713963 3790 True 1207.000000 2409 91.117667 896 3692 3 chr6D.!!$R2 2796
3 TraesCS6A01G122600 chr6D 300069327 300069976 649 True 680.000000 680 85.627000 3694 4344 1 chr6D.!!$R1 650
4 TraesCS6A01G122600 chr6B 152014992 152017482 2490 True 1150.666667 1905 91.347000 896 3701 3 chr6B.!!$R3 2805
5 TraesCS6A01G122600 chr1D 421085068 421085987 919 True 1264.000000 1264 91.957000 1 893 1 chr1D.!!$R1 892
6 TraesCS6A01G122600 chr1D 423894125 423895045 920 False 1216.000000 1216 90.988000 1 894 1 chr1D.!!$F2 893
7 TraesCS6A01G122600 chr1D 383916698 383917338 640 False 643.000000 643 84.830000 3694 4336 1 chr1D.!!$F1 642
8 TraesCS6A01G122600 chr3D 479623503 479624415 912 False 1236.000000 1236 91.485000 1 894 1 chr3D.!!$F2 893
9 TraesCS6A01G122600 chr3D 5429762 5430682 920 True 1194.000000 1194 90.554000 1 894 1 chr3D.!!$R1 893
10 TraesCS6A01G122600 chr7D 98404602 98405521 919 True 1232.000000 1232 91.323000 1 894 1 chr7D.!!$R1 893
11 TraesCS6A01G122600 chr4D 504271109 504272028 919 False 1225.000000 1225 91.196000 1 893 1 chr4D.!!$F3 892
12 TraesCS6A01G122600 chr4D 466290143 466291063 920 False 1182.000000 1182 90.368000 1 893 1 chr4D.!!$F2 892
13 TraesCS6A01G122600 chr4D 72530842 72531488 646 False 736.000000 736 87.191000 3698 4344 1 chr4D.!!$F1 646
14 TraesCS6A01G122600 chr2A 68888656 68889576 920 True 1205.000000 1205 90.771000 1 894 1 chr2A.!!$R1 893
15 TraesCS6A01G122600 chr2A 768285313 768286232 919 True 1158.000000 1158 89.902000 1 893 1 chr2A.!!$R3 892
16 TraesCS6A01G122600 chr5D 424047363 424048273 910 True 1201.000000 1201 90.830000 1 893 1 chr5D.!!$R1 892
17 TraesCS6A01G122600 chr7A 527989287 527990190 903 False 1199.000000 1199 90.819000 1 893 1 chr7A.!!$F2 892
18 TraesCS6A01G122600 chr2D 644389597 644390524 927 False 1186.000000 1186 90.323000 1 897 1 chr2D.!!$F1 896
19 TraesCS6A01G122600 chr2B 146929797 146930444 647 True 739.000000 739 87.289000 3694 4344 1 chr2B.!!$R1 650
20 TraesCS6A01G122600 chr2B 146951690 146952335 645 True 728.000000 728 87.037000 3699 4344 1 chr2B.!!$R2 645
21 TraesCS6A01G122600 chr2B 776916229 776916871 642 False 669.000000 669 85.538000 3699 4344 1 chr2B.!!$F2 645
22 TraesCS6A01G122600 chr1B 13657749 13658399 650 False 715.000000 715 86.503000 3694 4344 1 chr1B.!!$F1 650
23 TraesCS6A01G122600 chr5B 542438971 542439619 648 True 713.000000 713 86.503000 3694 4344 1 chr5B.!!$R2 650
24 TraesCS6A01G122600 chrUn 49503197 49503852 655 False 652.000000 652 84.627000 3689 4344 1 chrUn.!!$F1 655

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
330 338 0.105778 TGATGAACGGCAGTGTGACA 59.894 50.0 0.00 0.0 0.00 3.58 F
2044 3312 0.103937 CATCTCGAACCCAGCTCCTC 59.896 60.0 0.00 0.0 0.00 3.71 F
2087 3355 0.037447 GGAGAGCTTCCAAACAGGCT 59.963 55.0 9.31 0.0 46.01 4.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2068 3336 0.037447 AGCCTGTTTGGAAGCTCTCC 59.963 55.0 7.71 7.71 45.64 3.71 R
3361 4637 0.030101 GATGAGAAGCTCCCGTCTCG 59.970 60.0 8.29 0.00 45.79 4.04 R
3999 5286 0.794473 GACGGCCACTTTTCTAACGG 59.206 55.0 2.24 0.00 0.00 4.44 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 2.535317 AGCCCCCTCACCCAATGT 60.535 61.111 0.00 0.00 0.00 2.71
98 100 4.436998 GCCTGAGGGTGTCGACGG 62.437 72.222 11.62 5.03 34.45 4.79
204 212 0.391661 TCATCCTTGCACCGAAGCTC 60.392 55.000 0.00 0.00 34.99 4.09
205 213 0.674581 CATCCTTGCACCGAAGCTCA 60.675 55.000 0.00 0.00 34.99 4.26
219 227 1.216064 AGCTCAAGTGCATCCCCATA 58.784 50.000 0.00 0.00 34.99 2.74
247 255 0.868406 CTTCACCAAGCACTTCGTCC 59.132 55.000 0.00 0.00 0.00 4.79
285 293 0.544697 AGTTCAGGAACAACACCGGT 59.455 50.000 0.00 0.00 43.47 5.28
298 306 0.250295 CACCGGTTGCTCCTGAAAGA 60.250 55.000 2.97 0.00 34.07 2.52
330 338 0.105778 TGATGAACGGCAGTGTGACA 59.894 50.000 0.00 0.00 0.00 3.58
356 364 3.324108 GGGTTGGGCCACCTACGA 61.324 66.667 19.97 0.00 42.49 3.43
446 456 2.612212 TCATCATCTTCGACGACGATGA 59.388 45.455 34.85 34.85 46.16 2.92
534 546 3.064958 CACCTCTTTCGAGCGTACTATCA 59.935 47.826 0.00 0.00 35.90 2.15
603 616 9.712305 GTGGTACTGCTTATATCTGAATTATGT 57.288 33.333 0.00 0.00 0.00 2.29
626 644 9.672673 ATGTTATGCTCTGTTTATAGTCTGTTT 57.327 29.630 0.00 0.00 0.00 2.83
718 736 4.022068 CAGACCTTGCATACAACCAAACAT 60.022 41.667 0.00 0.00 0.00 2.71
724 742 5.465532 TGCATACAACCAAACATCATGTT 57.534 34.783 0.00 0.00 43.41 2.71
755 780 3.634910 GTGGACTACAACCAACCAAACAT 59.365 43.478 0.00 0.00 39.22 2.71
767 792 1.321474 CCAAACATCAGGCAGTGTGT 58.679 50.000 0.00 0.00 0.00 3.72
773 798 3.225104 ACATCAGGCAGTGTGTTTCAAT 58.775 40.909 0.00 0.00 0.00 2.57
844 901 5.357742 TTGCATAATCAGGCTGAGTAGAA 57.642 39.130 26.18 16.80 30.07 2.10
854 911 4.872691 CAGGCTGAGTAGAAAAGTGTATGG 59.127 45.833 9.42 0.00 0.00 2.74
894 951 4.639171 GCAACCAAACACGCCCCG 62.639 66.667 0.00 0.00 0.00 5.73
896 953 2.124236 AACCAAACACGCCCCGAA 60.124 55.556 0.00 0.00 0.00 4.30
897 954 2.483197 AACCAAACACGCCCCGAAC 61.483 57.895 0.00 0.00 0.00 3.95
898 955 4.020378 CCAAACACGCCCCGAACG 62.020 66.667 0.00 0.00 0.00 3.95
899 956 4.676586 CAAACACGCCCCGAACGC 62.677 66.667 0.00 0.00 0.00 4.84
925 982 3.554342 CCCTCCCGGCATCCTCTG 61.554 72.222 0.00 0.00 0.00 3.35
939 996 0.814457 CCTCTGTCCCTCACTTCTCG 59.186 60.000 0.00 0.00 0.00 4.04
1100 2334 4.107363 ACGTCTCGTTAATTTCCTCCTC 57.893 45.455 0.00 0.00 36.35 3.71
1104 2338 4.403113 GTCTCGTTAATTTCCTCCTCCTCT 59.597 45.833 0.00 0.00 0.00 3.69
1106 2340 4.094476 TCGTTAATTTCCTCCTCCTCTGT 58.906 43.478 0.00 0.00 0.00 3.41
1112 2346 0.979665 TCCTCCTCCTCTGTGCTTTG 59.020 55.000 0.00 0.00 0.00 2.77
1117 2351 0.671781 CTCCTCTGTGCTTTGACGGG 60.672 60.000 0.00 0.00 0.00 5.28
1119 2353 2.664851 TCTGTGCTTTGACGGGCG 60.665 61.111 0.00 0.00 0.00 6.13
1120 2354 2.972505 CTGTGCTTTGACGGGCGT 60.973 61.111 0.00 0.00 0.00 5.68
1121 2355 3.240606 CTGTGCTTTGACGGGCGTG 62.241 63.158 0.00 0.00 0.00 5.34
1122 2356 4.683334 GTGCTTTGACGGGCGTGC 62.683 66.667 0.00 0.00 0.00 5.34
1140 2374 3.375676 GACGTGCGTGCGTTTTGC 61.376 61.111 0.67 0.00 45.79 3.68
1196 2430 1.735973 CGCGATCTGGACATCTCCA 59.264 57.895 0.00 0.00 45.11 3.86
1221 2455 2.126071 CCAGGTACGTCCGCACTG 60.126 66.667 0.00 0.00 41.99 3.66
1224 2458 1.676635 AGGTACGTCCGCACTGCTA 60.677 57.895 0.00 0.00 41.99 3.49
1237 2475 0.248843 ACTGCTACTGCTGCTCTTCC 59.751 55.000 0.00 0.00 41.07 3.46
1277 2515 3.181493 GGTGCTTGATGCTCTGGTTATTG 60.181 47.826 0.00 0.00 43.37 1.90
1355 2593 2.602878 GACGATACGCTGTTCCAAAGA 58.397 47.619 0.00 0.00 0.00 2.52
1365 2603 1.614903 TGTTCCAAAGATGCAGCTTGG 59.385 47.619 19.48 20.06 0.00 3.61
1477 2715 7.544566 TGAATCCTTTGTCGATCTACAAGTAAC 59.455 37.037 12.06 5.48 40.29 2.50
1534 2772 6.149129 AGAACCAATCACCTGAAGTTTTTC 57.851 37.500 0.00 0.00 0.00 2.29
1722 2990 3.743911 TGTACACGGTCTTTGCTGTTATG 59.256 43.478 0.00 0.00 0.00 1.90
1781 3049 8.948631 TTATACCTGCAGAATGAAAAGAGTAG 57.051 34.615 17.39 0.00 39.69 2.57
1867 3135 5.406649 TCACGCCACCAAATTGAATATTTC 58.593 37.500 0.00 0.00 0.00 2.17
1914 3182 8.629158 AGAAGTTTGATTGTATTTGTAAGCACA 58.371 29.630 0.00 0.00 0.00 4.57
1939 3207 4.652421 AGATACACCGCCTATTTAGGAACA 59.348 41.667 7.84 0.00 46.63 3.18
1947 3215 3.715315 GCCTATTTAGGAACAGGGGTACT 59.285 47.826 7.84 0.00 46.63 2.73
1948 3216 4.165565 GCCTATTTAGGAACAGGGGTACTT 59.834 45.833 7.84 0.00 46.63 2.24
1949 3217 5.367644 GCCTATTTAGGAACAGGGGTACTTA 59.632 44.000 7.84 0.00 46.63 2.24
1950 3218 6.464039 GCCTATTTAGGAACAGGGGTACTTAG 60.464 46.154 7.84 0.00 46.63 2.18
1951 3219 5.970501 ATTTAGGAACAGGGGTACTTAGG 57.029 43.478 0.00 0.00 0.00 2.69
1952 3220 1.581223 AGGAACAGGGGTACTTAGGC 58.419 55.000 0.00 0.00 0.00 3.93
1953 3221 0.545171 GGAACAGGGGTACTTAGGCC 59.455 60.000 0.00 0.00 0.00 5.19
1954 3222 0.545171 GAACAGGGGTACTTAGGCCC 59.455 60.000 0.00 5.72 44.09 5.80
1955 3223 0.120581 AACAGGGGTACTTAGGCCCT 59.879 55.000 0.00 1.03 44.25 5.19
1956 3224 2.221918 CAGGGGTACTTAGGCCCTG 58.778 63.158 16.79 16.79 44.25 4.45
1957 3225 0.620700 CAGGGGTACTTAGGCCCTGT 60.621 60.000 20.42 0.00 44.25 4.00
1958 3226 0.120581 AGGGGTACTTAGGCCCTGTT 59.879 55.000 0.00 0.00 44.25 3.16
1959 3227 0.545171 GGGGTACTTAGGCCCTGTTC 59.455 60.000 0.00 0.00 44.25 3.18
1960 3228 0.545171 GGGTACTTAGGCCCTGTTCC 59.455 60.000 0.00 3.19 41.63 3.62
1961 3229 0.177373 GGTACTTAGGCCCTGTTCCG 59.823 60.000 0.00 0.00 0.00 4.30
1962 3230 1.188863 GTACTTAGGCCCTGTTCCGA 58.811 55.000 0.00 0.00 0.00 4.55
1963 3231 1.761198 GTACTTAGGCCCTGTTCCGAT 59.239 52.381 0.00 0.00 0.00 4.18
1964 3232 0.831307 ACTTAGGCCCTGTTCCGATC 59.169 55.000 0.00 0.00 0.00 3.69
1965 3233 0.106894 CTTAGGCCCTGTTCCGATCC 59.893 60.000 0.00 0.00 0.00 3.36
1966 3234 1.342672 TTAGGCCCTGTTCCGATCCC 61.343 60.000 0.00 0.00 0.00 3.85
1967 3235 4.191015 GGCCCTGTTCCGATCCCC 62.191 72.222 0.00 0.00 0.00 4.81
1968 3236 3.090532 GCCCTGTTCCGATCCCCT 61.091 66.667 0.00 0.00 0.00 4.79
1969 3237 3.108288 GCCCTGTTCCGATCCCCTC 62.108 68.421 0.00 0.00 0.00 4.30
1970 3238 2.444256 CCCTGTTCCGATCCCCTCC 61.444 68.421 0.00 0.00 0.00 4.30
1971 3239 2.797278 CCTGTTCCGATCCCCTCCG 61.797 68.421 0.00 0.00 0.00 4.63
1972 3240 3.447025 CTGTTCCGATCCCCTCCGC 62.447 68.421 0.00 0.00 0.00 5.54
1973 3241 3.155167 GTTCCGATCCCCTCCGCT 61.155 66.667 0.00 0.00 0.00 5.52
1974 3242 2.838225 TTCCGATCCCCTCCGCTC 60.838 66.667 0.00 0.00 0.00 5.03
1975 3243 4.916314 TCCGATCCCCTCCGCTCC 62.916 72.222 0.00 0.00 0.00 4.70
1978 3246 4.880426 GATCCCCTCCGCTCCCCA 62.880 72.222 0.00 0.00 0.00 4.96
1979 3247 4.431524 ATCCCCTCCGCTCCCCAA 62.432 66.667 0.00 0.00 0.00 4.12
1982 3250 4.101448 CCCTCCGCTCCCCAACTG 62.101 72.222 0.00 0.00 0.00 3.16
1983 3251 4.785453 CCTCCGCTCCCCAACTGC 62.785 72.222 0.00 0.00 0.00 4.40
1984 3252 3.710722 CTCCGCTCCCCAACTGCT 61.711 66.667 0.00 0.00 0.00 4.24
1985 3253 3.965539 CTCCGCTCCCCAACTGCTG 62.966 68.421 0.00 0.00 0.00 4.41
1987 3255 4.711949 CGCTCCCCAACTGCTGCT 62.712 66.667 0.00 0.00 0.00 4.24
1988 3256 2.749441 GCTCCCCAACTGCTGCTC 60.749 66.667 0.00 0.00 0.00 4.26
1989 3257 2.045536 CTCCCCAACTGCTGCTCC 60.046 66.667 0.00 0.00 0.00 4.70
1990 3258 3.635268 CTCCCCAACTGCTGCTCCC 62.635 68.421 0.00 0.00 0.00 4.30
1993 3261 4.020617 CCAACTGCTGCTCCCGGA 62.021 66.667 0.73 0.00 0.00 5.14
1994 3262 2.435586 CAACTGCTGCTCCCGGAG 60.436 66.667 10.41 10.41 0.00 4.63
2013 3281 4.329545 GGAGGGAGCGCCAACACA 62.330 66.667 9.31 0.00 35.15 3.72
2014 3282 2.281484 GAGGGAGCGCCAACACAA 60.281 61.111 9.31 0.00 35.15 3.33
2015 3283 1.675641 GAGGGAGCGCCAACACAAT 60.676 57.895 9.31 0.00 35.15 2.71
2016 3284 1.648467 GAGGGAGCGCCAACACAATC 61.648 60.000 9.31 0.00 35.15 2.67
2017 3285 2.480555 GGAGCGCCAACACAATCG 59.519 61.111 2.29 0.00 0.00 3.34
2018 3286 2.325082 GGAGCGCCAACACAATCGT 61.325 57.895 2.29 0.00 0.00 3.73
2037 3305 2.892640 CGGAGCATCTCGAACCCA 59.107 61.111 0.00 0.00 31.82 4.51
2038 3306 1.227089 CGGAGCATCTCGAACCCAG 60.227 63.158 0.00 0.00 31.82 4.45
2039 3307 1.522580 GGAGCATCTCGAACCCAGC 60.523 63.158 0.00 0.00 33.73 4.85
2040 3308 1.519719 GAGCATCTCGAACCCAGCT 59.480 57.895 0.00 0.00 34.61 4.24
2041 3309 0.529555 GAGCATCTCGAACCCAGCTC 60.530 60.000 8.55 8.55 41.21 4.09
2042 3310 1.522580 GCATCTCGAACCCAGCTCC 60.523 63.158 0.00 0.00 0.00 4.70
2043 3311 1.965754 GCATCTCGAACCCAGCTCCT 61.966 60.000 0.00 0.00 0.00 3.69
2044 3312 0.103937 CATCTCGAACCCAGCTCCTC 59.896 60.000 0.00 0.00 0.00 3.71
2045 3313 1.388065 ATCTCGAACCCAGCTCCTCG 61.388 60.000 0.00 0.00 0.00 4.63
2046 3314 3.708220 CTCGAACCCAGCTCCTCGC 62.708 68.421 0.00 0.00 39.57 5.03
2065 3333 2.820479 CGGAGCGGAGTCGAGAGT 60.820 66.667 0.00 0.00 39.00 3.24
2066 3334 2.815298 CGGAGCGGAGTCGAGAGTC 61.815 68.421 0.00 0.00 39.00 3.36
2067 3335 2.474612 GGAGCGGAGTCGAGAGTCC 61.475 68.421 15.26 15.26 45.40 3.85
2071 3339 3.816388 GGAGTCGAGAGTCCGGAG 58.184 66.667 3.06 0.00 40.74 4.63
2072 3340 1.221293 GGAGTCGAGAGTCCGGAGA 59.779 63.158 3.06 0.00 40.74 3.71
2073 3341 0.812412 GGAGTCGAGAGTCCGGAGAG 60.812 65.000 3.06 0.00 40.74 3.20
2074 3342 1.433837 GAGTCGAGAGTCCGGAGAGC 61.434 65.000 3.06 0.00 0.00 4.09
2075 3343 1.450669 GTCGAGAGTCCGGAGAGCT 60.451 63.158 3.06 1.51 0.00 4.09
2076 3344 1.027792 GTCGAGAGTCCGGAGAGCTT 61.028 60.000 3.06 0.00 0.00 3.74
2077 3345 0.745128 TCGAGAGTCCGGAGAGCTTC 60.745 60.000 3.06 0.00 0.00 3.86
2078 3346 1.720694 CGAGAGTCCGGAGAGCTTCC 61.721 65.000 3.06 0.00 43.04 3.46
2086 3354 2.560954 GGAGAGCTTCCAAACAGGC 58.439 57.895 9.31 0.00 46.01 4.85
2087 3355 0.037447 GGAGAGCTTCCAAACAGGCT 59.963 55.000 9.31 0.00 46.01 4.58
2089 3357 3.641017 GAGCTTCCAAACAGGCTCT 57.359 52.632 6.55 0.00 45.15 4.09
2176 3444 3.246226 CCTCAATCGAACGCCTATTTCAG 59.754 47.826 0.00 0.00 0.00 3.02
2203 3471 9.927668 TTCAGGAAAAATGAAACAAATATCCTC 57.072 29.630 0.00 0.00 33.85 3.71
2376 3644 0.177141 TACTGATGTTGGGCTACGGC 59.823 55.000 0.00 0.00 37.82 5.68
2388 3656 1.812507 CTACGGCTGCGGTAAACCC 60.813 63.158 18.69 0.00 0.00 4.11
2518 3790 3.190744 GGGTTTTAACTGAACCTGCTAGC 59.809 47.826 8.10 8.10 44.71 3.42
2519 3791 3.120304 GGTTTTAACTGAACCTGCTAGCG 60.120 47.826 10.77 4.90 42.58 4.26
2548 3820 5.392380 CCAGCTTCTAGTTTGTGCCATAAAG 60.392 44.000 0.00 0.00 0.00 1.85
2562 3834 3.004106 GCCATAAAGCATGATCTGGACAC 59.996 47.826 10.39 0.00 36.69 3.67
2615 3887 8.561738 TTCATGGTTGACTCTTTCTTTATACC 57.438 34.615 0.00 0.00 0.00 2.73
2743 4015 3.176708 CAGAAGGATTTTGCTGCAATCG 58.823 45.455 16.77 3.02 32.22 3.34
2841 4117 9.958180 TTACATCTTTTTCCTCAATATCTGACA 57.042 29.630 0.00 0.00 0.00 3.58
2842 4118 8.868522 ACATCTTTTTCCTCAATATCTGACAA 57.131 30.769 0.00 0.00 0.00 3.18
2844 4120 7.383102 TCTTTTTCCTCAATATCTGACAAGC 57.617 36.000 0.00 0.00 0.00 4.01
3027 4303 1.398390 GTGGACAGCGCTTTTATGGAG 59.602 52.381 7.50 0.00 0.00 3.86
3042 4318 1.944177 TGGAGAGGTTGAAGGAGGAG 58.056 55.000 0.00 0.00 0.00 3.69
3079 4355 7.883311 TGGTGAAGAAGAAAGTTATAGAAAGGG 59.117 37.037 0.00 0.00 0.00 3.95
3091 4367 7.420029 AGTTATAGAAAGGGTGGAGAAGTCTA 58.580 38.462 0.00 0.00 0.00 2.59
3110 4386 0.318614 AAAGCAAACAACGCCGATGG 60.319 50.000 0.00 0.00 0.00 3.51
3163 4439 7.930513 AGTTTAGTTTTATTTGCAGCTTGTC 57.069 32.000 0.00 0.00 0.00 3.18
3354 4630 1.237533 CATGTTGCACACAGGCACTA 58.762 50.000 7.58 0.00 44.86 2.74
3374 4650 2.344203 CCTGACGAGACGGGAGCTT 61.344 63.158 0.00 0.00 38.49 3.74
3402 4678 3.338249 GAAGAAGTTACTGGCAGCATCA 58.662 45.455 15.89 0.00 0.00 3.07
3408 4684 0.390492 TACTGGCAGCATCATCTCCG 59.610 55.000 15.89 0.00 0.00 4.63
3429 4705 0.251742 CATCCTGAAAACTGCCCCCA 60.252 55.000 0.00 0.00 0.00 4.96
3485 4761 3.103911 CTTGTCGGCGTCGTGGAC 61.104 66.667 10.18 0.00 37.69 4.02
3632 4917 2.915659 TCTCGCAGAACCGTGGGT 60.916 61.111 0.00 0.00 37.65 4.51
3676 4961 4.766404 AATGAACACATTTCTCGTTCCC 57.234 40.909 0.00 0.00 38.59 3.97
3692 4977 2.584608 CCCCGATGAGGTGTGGTC 59.415 66.667 0.00 0.00 38.74 4.02
3799 5086 4.494350 AACAAGTCATGCAATCTGACAC 57.506 40.909 18.52 0.00 44.37 3.67
3886 5173 2.689983 CAAGAAACTGTGGCAGAACCTT 59.310 45.455 2.91 0.79 40.22 3.50
3909 5196 5.847670 AAACAGAAAGAGTATGAGAACGC 57.152 39.130 0.00 0.00 0.00 4.84
3999 5286 0.806492 GATGTCGGGGAAGAAGTCGC 60.806 60.000 0.00 0.00 38.47 5.19
4006 5293 0.529378 GGGAAGAAGTCGCCGTTAGA 59.471 55.000 0.00 0.00 33.06 2.10
4007 5294 1.067354 GGGAAGAAGTCGCCGTTAGAA 60.067 52.381 0.00 0.00 33.06 2.10
4014 5301 0.165295 GTCGCCGTTAGAAAAGTGGC 59.835 55.000 0.00 0.00 42.29 5.01
4082 5370 0.455815 GCGCTCCCCAAAACCTTATG 59.544 55.000 0.00 0.00 0.00 1.90
4086 5374 2.291605 GCTCCCCAAAACCTTATGACCT 60.292 50.000 0.00 0.00 0.00 3.85
4113 5401 2.299297 CCGTACAGGACTCAAAGAGGTT 59.701 50.000 0.00 0.00 45.00 3.50
4126 5414 1.231963 AGAGGTTGGGTTTTGGAGGT 58.768 50.000 0.00 0.00 0.00 3.85
4172 5460 2.358619 CAAGCCGGGATGGGGAAA 59.641 61.111 2.18 0.00 38.63 3.13
4188 5476 0.807496 GAAAATCGCAGGAGCAGCTT 59.193 50.000 0.00 0.00 42.27 3.74
4229 5518 2.481104 CGAGAGGAAGAGGATGTTCTGC 60.481 54.545 0.00 0.00 38.62 4.26
4244 5533 1.897560 TCTGCTGTGTCTCTCTCGAA 58.102 50.000 0.00 0.00 0.00 3.71
4280 5569 6.054860 TCTTTTATAGGCACAGAAGAAGCT 57.945 37.500 0.00 0.00 0.00 3.74
4300 5589 4.717629 CGAACGGGCAGCGACAGA 62.718 66.667 0.00 0.00 0.00 3.41
4370 5659 3.751479 AATTTCAACTTCCCTGCAACC 57.249 42.857 0.00 0.00 0.00 3.77
4371 5660 2.452600 TTTCAACTTCCCTGCAACCT 57.547 45.000 0.00 0.00 0.00 3.50
4372 5661 2.452600 TTCAACTTCCCTGCAACCTT 57.547 45.000 0.00 0.00 0.00 3.50
4373 5662 2.452600 TCAACTTCCCTGCAACCTTT 57.547 45.000 0.00 0.00 0.00 3.11
4374 5663 2.745968 TCAACTTCCCTGCAACCTTTT 58.254 42.857 0.00 0.00 0.00 2.27
4375 5664 2.430332 TCAACTTCCCTGCAACCTTTTG 59.570 45.455 0.00 0.00 35.62 2.44
4376 5665 2.159179 ACTTCCCTGCAACCTTTTGT 57.841 45.000 0.00 0.00 34.90 2.83
4377 5666 3.306472 ACTTCCCTGCAACCTTTTGTA 57.694 42.857 0.00 0.00 34.90 2.41
4378 5667 3.844640 ACTTCCCTGCAACCTTTTGTAT 58.155 40.909 0.00 0.00 34.90 2.29
4379 5668 4.993028 ACTTCCCTGCAACCTTTTGTATA 58.007 39.130 0.00 0.00 34.90 1.47
4380 5669 4.765339 ACTTCCCTGCAACCTTTTGTATAC 59.235 41.667 0.00 0.00 34.90 1.47
4381 5670 3.692690 TCCCTGCAACCTTTTGTATACC 58.307 45.455 0.00 0.00 34.90 2.73
4382 5671 3.074687 TCCCTGCAACCTTTTGTATACCA 59.925 43.478 0.00 0.00 34.90 3.25
4383 5672 3.443681 CCCTGCAACCTTTTGTATACCAG 59.556 47.826 0.00 0.00 34.90 4.00
4384 5673 4.079253 CCTGCAACCTTTTGTATACCAGT 58.921 43.478 0.00 0.00 34.90 4.00
4385 5674 4.156008 CCTGCAACCTTTTGTATACCAGTC 59.844 45.833 0.00 0.00 34.90 3.51
4386 5675 3.749088 TGCAACCTTTTGTATACCAGTCG 59.251 43.478 0.00 0.00 34.90 4.18
4387 5676 3.749609 GCAACCTTTTGTATACCAGTCGT 59.250 43.478 0.00 0.00 34.90 4.34
4388 5677 4.378046 GCAACCTTTTGTATACCAGTCGTG 60.378 45.833 0.00 0.00 34.90 4.35
4389 5678 4.612264 ACCTTTTGTATACCAGTCGTGT 57.388 40.909 0.00 0.00 0.00 4.49
4390 5679 4.312443 ACCTTTTGTATACCAGTCGTGTG 58.688 43.478 0.00 0.00 0.00 3.82
4391 5680 3.682858 CCTTTTGTATACCAGTCGTGTGG 59.317 47.826 0.00 4.50 44.01 4.17
4392 5681 2.373540 TTGTATACCAGTCGTGTGGC 57.626 50.000 0.00 0.00 41.90 5.01
4393 5682 1.258676 TGTATACCAGTCGTGTGGCA 58.741 50.000 0.00 0.00 41.90 4.92
4394 5683 1.619332 TGTATACCAGTCGTGTGGCAA 59.381 47.619 0.00 0.00 41.90 4.52
4395 5684 2.037381 TGTATACCAGTCGTGTGGCAAA 59.963 45.455 0.00 0.00 41.90 3.68
4396 5685 2.264005 ATACCAGTCGTGTGGCAAAA 57.736 45.000 5.81 0.00 41.90 2.44
4397 5686 2.039818 TACCAGTCGTGTGGCAAAAA 57.960 45.000 5.81 0.00 41.90 1.94
4416 5705 3.782889 AAATTTAGACATCGGCTTGGC 57.217 42.857 0.00 0.00 0.00 4.52
4417 5706 2.717639 ATTTAGACATCGGCTTGGCT 57.282 45.000 0.00 0.00 38.85 4.75
4418 5707 2.024176 TTTAGACATCGGCTTGGCTC 57.976 50.000 0.00 0.00 36.11 4.70
4419 5708 0.901827 TTAGACATCGGCTTGGCTCA 59.098 50.000 0.00 0.00 36.11 4.26
4420 5709 1.123077 TAGACATCGGCTTGGCTCAT 58.877 50.000 0.00 0.00 36.11 2.90
4421 5710 0.254178 AGACATCGGCTTGGCTCATT 59.746 50.000 0.00 0.00 23.78 2.57
4422 5711 0.659957 GACATCGGCTTGGCTCATTC 59.340 55.000 0.00 0.00 0.00 2.67
4423 5712 0.749454 ACATCGGCTTGGCTCATTCC 60.749 55.000 0.00 0.00 0.00 3.01
4424 5713 1.152881 ATCGGCTTGGCTCATTCCC 60.153 57.895 0.00 0.00 0.00 3.97
4425 5714 2.947938 ATCGGCTTGGCTCATTCCCG 62.948 60.000 0.00 0.00 37.21 5.14
4426 5715 3.521796 GGCTTGGCTCATTCCCGC 61.522 66.667 0.00 0.00 0.00 6.13
4427 5716 2.751436 GCTTGGCTCATTCCCGCA 60.751 61.111 0.00 0.00 0.00 5.69
4428 5717 2.342650 GCTTGGCTCATTCCCGCAA 61.343 57.895 0.00 0.00 0.00 4.85
4429 5718 1.508088 CTTGGCTCATTCCCGCAAC 59.492 57.895 0.00 0.00 0.00 4.17
4430 5719 1.937546 CTTGGCTCATTCCCGCAACC 61.938 60.000 0.00 0.00 0.00 3.77
4431 5720 3.140814 GGCTCATTCCCGCAACCC 61.141 66.667 0.00 0.00 0.00 4.11
4432 5721 3.508840 GCTCATTCCCGCAACCCG 61.509 66.667 0.00 0.00 0.00 5.28
4433 5722 3.508840 CTCATTCCCGCAACCCGC 61.509 66.667 0.00 0.00 35.03 6.13
4455 5744 2.499098 CGACGTGTCGTGACGAGG 60.499 66.667 8.41 3.29 46.99 4.63
4456 5745 2.799916 GACGTGTCGTGACGAGGC 60.800 66.667 8.41 3.06 41.37 4.70
4457 5746 4.678269 ACGTGTCGTGACGAGGCG 62.678 66.667 22.85 22.85 42.10 5.52
4459 5748 4.034258 GTGTCGTGACGAGGCGGA 62.034 66.667 8.41 0.00 36.23 5.54
4460 5749 4.034258 TGTCGTGACGAGGCGGAC 62.034 66.667 8.41 0.00 36.23 4.79
4461 5750 4.034258 GTCGTGACGAGGCGGACA 62.034 66.667 8.41 0.00 36.23 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 0.458543 CTCGTCGGACATTGGGTGAG 60.459 60.000 9.10 1.09 0.00 3.51
34 35 1.139734 GCAGCTCAATCTCGTCGGA 59.860 57.895 0.00 0.00 0.00 4.55
98 100 4.925861 GCTCCTCCATGCCCTCGC 62.926 72.222 0.00 0.00 0.00 5.03
164 172 1.477558 CCTTGCAGAAGTGAGTTGGGT 60.478 52.381 0.00 0.00 0.00 4.51
204 212 0.468029 GGGGTATGGGGATGCACTTG 60.468 60.000 0.00 0.00 0.00 3.16
205 213 0.627469 AGGGGTATGGGGATGCACTT 60.627 55.000 0.00 0.00 0.00 3.16
219 227 2.069165 GCTTGGTGAAGTCCAGGGGT 62.069 60.000 0.00 0.00 38.80 4.95
268 276 1.384525 CAACCGGTGTTGTTCCTGAA 58.615 50.000 8.52 0.00 45.51 3.02
285 293 1.347707 ACCGTCATCTTTCAGGAGCAA 59.652 47.619 0.00 0.00 0.00 3.91
298 306 2.350522 GTTCATCAGCTTGACCGTCAT 58.649 47.619 1.09 0.00 0.00 3.06
324 332 2.567169 CCAACCCTGATCTAGTGTCACA 59.433 50.000 5.62 0.00 0.00 3.58
330 338 0.253160 TGGCCCAACCCTGATCTAGT 60.253 55.000 0.00 0.00 37.83 2.57
356 364 4.747108 CGATCTTAATCTGATGAACGGCTT 59.253 41.667 0.00 0.00 0.00 4.35
372 380 2.034179 CGTCACCATGTAGCCGATCTTA 59.966 50.000 0.00 0.00 0.00 2.10
446 456 2.872245 CACTTGTTGACGACCTCAATGT 59.128 45.455 0.00 0.00 41.10 2.71
534 546 7.862372 CGCATAAACCATCAACTAGCATAATTT 59.138 33.333 0.00 0.00 0.00 1.82
603 616 8.450964 GCAAAACAGACTATAAACAGAGCATAA 58.549 33.333 0.00 0.00 0.00 1.90
626 644 1.473677 GGCAGCACACATCATAAGCAA 59.526 47.619 0.00 0.00 0.00 3.91
718 736 5.830457 TGTAGTCCACAAATCCAAAACATGA 59.170 36.000 0.00 0.00 32.95 3.07
724 742 5.163499 GTTGGTTGTAGTCCACAAATCCAAA 60.163 40.000 11.54 0.00 46.59 3.28
744 767 1.000060 CACTGCCTGATGTTTGGTTGG 60.000 52.381 0.00 0.00 0.00 3.77
755 780 2.229792 GGATTGAAACACACTGCCTGA 58.770 47.619 0.00 0.00 0.00 3.86
767 792 1.275856 GGTTGCCTGCATGGATTGAAA 59.724 47.619 6.40 0.00 38.35 2.69
773 798 0.758310 TGTTTGGTTGCCTGCATGGA 60.758 50.000 6.40 0.00 38.35 3.41
830 887 5.337571 CCATACACTTTTCTACTCAGCCTGA 60.338 44.000 0.00 0.00 0.00 3.86
844 901 1.005805 TGCCTGCATCCCATACACTTT 59.994 47.619 0.00 0.00 0.00 2.66
854 911 2.570181 GCAACAGTGCCTGCATCC 59.430 61.111 11.85 0.00 45.68 3.51
925 982 0.670854 GGTTGCGAGAAGTGAGGGAC 60.671 60.000 0.00 0.00 0.00 4.46
939 996 1.444895 CTGCAGCGATTTGGGTTGC 60.445 57.895 0.00 0.00 41.32 4.17
1047 1105 1.139947 CCGAGAGAGGAGGCGTTTC 59.860 63.158 0.00 0.00 0.00 2.78
1080 2314 3.130693 AGGAGGAGGAAATTAACGAGACG 59.869 47.826 0.00 0.00 0.00 4.18
1086 2320 3.942115 GCACAGAGGAGGAGGAAATTAAC 59.058 47.826 0.00 0.00 0.00 2.01
1100 2334 2.328099 GCCCGTCAAAGCACAGAGG 61.328 63.158 0.00 0.00 0.00 3.69
1104 2338 3.276091 CACGCCCGTCAAAGCACA 61.276 61.111 0.00 0.00 0.00 4.57
1136 2370 2.254951 CTGCATTGGCGACGCAAA 59.745 55.556 23.09 18.20 45.35 3.68
1146 2380 4.260355 CCCATCGGCGCTGCATTG 62.260 66.667 12.58 8.93 0.00 2.82
1154 2388 4.175337 ACCATCACCCCATCGGCG 62.175 66.667 0.00 0.00 33.26 6.46
1156 2390 1.451927 CACACCATCACCCCATCGG 60.452 63.158 0.00 0.00 37.81 4.18
1159 2393 0.396139 GCATCACACCATCACCCCAT 60.396 55.000 0.00 0.00 0.00 4.00
1165 2399 1.153389 ATCGCGCATCACACCATCA 60.153 52.632 8.75 0.00 0.00 3.07
1196 2430 1.214589 GACGTACCTGGTCACGCAT 59.785 57.895 20.84 9.05 41.80 4.73
1221 2455 0.823460 AGAGGAAGAGCAGCAGTAGC 59.177 55.000 0.00 0.00 42.56 3.58
1224 2458 1.055040 ACAAGAGGAAGAGCAGCAGT 58.945 50.000 0.00 0.00 0.00 4.40
1237 2475 0.179134 CCGGGCTCTACGAACAAGAG 60.179 60.000 0.00 0.00 42.84 2.85
1305 2543 4.845580 CGGGCCCTGCAGCAGTAG 62.846 72.222 22.43 12.94 0.00 2.57
1332 2570 0.108992 TGGAACAGCGTATCGTCCAC 60.109 55.000 0.00 0.00 0.00 4.02
1337 2575 2.285834 GCATCTTTGGAACAGCGTATCG 60.286 50.000 0.00 0.00 42.39 2.92
1355 2593 3.121030 GACGCGACCAAGCTGCAT 61.121 61.111 15.93 0.00 34.40 3.96
1477 2715 2.988493 CCACAACAAATCAAGCAATCGG 59.012 45.455 0.00 0.00 0.00 4.18
1534 2772 6.684131 CACAAATTTGTACTGTATCTCGCATG 59.316 38.462 22.87 2.08 39.91 4.06
1597 2865 8.655970 ACATGCAGTTTTTCTTTTGAACTAAAC 58.344 29.630 0.00 0.00 38.47 2.01
1722 2990 8.249638 TCACTCTATCATTTCTATATGCAGAGC 58.750 37.037 0.00 0.00 37.63 4.09
1753 3021 9.331282 ACTCTTTTCATTCTGCAGGTATAATAC 57.669 33.333 15.13 0.00 0.00 1.89
1826 3094 3.379057 CGTGAAACTAACACCTTTTGGGT 59.621 43.478 0.00 0.00 42.27 4.51
1837 3105 3.636282 ATTTGGTGGCGTGAAACTAAC 57.364 42.857 0.00 0.00 31.75 2.34
1867 3135 4.276183 TCTCTAGCTTCGCATTGTACTAGG 59.724 45.833 0.00 0.00 0.00 3.02
1914 3182 5.881923 TCCTAAATAGGCGGTGTATCTTT 57.118 39.130 1.37 0.00 43.31 2.52
1921 3189 2.561569 CCTGTTCCTAAATAGGCGGTG 58.438 52.381 1.37 0.00 43.31 4.94
1922 3190 1.489230 CCCTGTTCCTAAATAGGCGGT 59.511 52.381 1.37 0.00 41.25 5.68
1947 3215 1.342672 GGGATCGGAACAGGGCCTAA 61.343 60.000 5.28 0.00 0.00 2.69
1948 3216 1.764854 GGGATCGGAACAGGGCCTA 60.765 63.158 5.28 0.00 0.00 3.93
1949 3217 3.090532 GGGATCGGAACAGGGCCT 61.091 66.667 0.00 0.00 0.00 5.19
1950 3218 4.191015 GGGGATCGGAACAGGGCC 62.191 72.222 0.00 0.00 0.00 5.80
1951 3219 3.090532 AGGGGATCGGAACAGGGC 61.091 66.667 0.00 0.00 0.00 5.19
1952 3220 2.444256 GGAGGGGATCGGAACAGGG 61.444 68.421 0.00 0.00 0.00 4.45
1953 3221 2.797278 CGGAGGGGATCGGAACAGG 61.797 68.421 0.00 0.00 0.00 4.00
1954 3222 2.815308 CGGAGGGGATCGGAACAG 59.185 66.667 0.00 0.00 0.00 3.16
1955 3223 3.467226 GCGGAGGGGATCGGAACA 61.467 66.667 0.00 0.00 0.00 3.18
1956 3224 3.153270 GAGCGGAGGGGATCGGAAC 62.153 68.421 0.00 0.00 0.00 3.62
1957 3225 2.838225 GAGCGGAGGGGATCGGAA 60.838 66.667 0.00 0.00 0.00 4.30
1958 3226 4.916314 GGAGCGGAGGGGATCGGA 62.916 72.222 0.00 0.00 0.00 4.55
1961 3229 4.880426 TGGGGAGCGGAGGGGATC 62.880 72.222 0.00 0.00 0.00 3.36
1962 3230 4.431524 TTGGGGAGCGGAGGGGAT 62.432 66.667 0.00 0.00 0.00 3.85
1965 3233 4.101448 CAGTTGGGGAGCGGAGGG 62.101 72.222 0.00 0.00 0.00 4.30
1966 3234 4.785453 GCAGTTGGGGAGCGGAGG 62.785 72.222 0.00 0.00 0.00 4.30
1967 3235 3.710722 AGCAGTTGGGGAGCGGAG 61.711 66.667 0.00 0.00 0.00 4.63
1968 3236 4.020617 CAGCAGTTGGGGAGCGGA 62.021 66.667 0.00 0.00 0.00 5.54
1970 3238 4.711949 AGCAGCAGTTGGGGAGCG 62.712 66.667 0.00 0.00 0.00 5.03
1971 3239 2.749441 GAGCAGCAGTTGGGGAGC 60.749 66.667 0.00 0.00 0.00 4.70
1972 3240 2.045536 GGAGCAGCAGTTGGGGAG 60.046 66.667 0.00 0.00 0.00 4.30
1973 3241 3.650950 GGGAGCAGCAGTTGGGGA 61.651 66.667 0.00 0.00 0.00 4.81
1976 3244 3.965539 CTCCGGGAGCAGCAGTTGG 62.966 68.421 11.83 0.00 0.00 3.77
1977 3245 2.435586 CTCCGGGAGCAGCAGTTG 60.436 66.667 11.83 0.00 0.00 3.16
1996 3264 3.842925 TTGTGTTGGCGCTCCCTCC 62.843 63.158 7.64 0.00 0.00 4.30
1997 3265 1.648467 GATTGTGTTGGCGCTCCCTC 61.648 60.000 7.64 0.00 0.00 4.30
1998 3266 1.675641 GATTGTGTTGGCGCTCCCT 60.676 57.895 7.64 0.00 0.00 4.20
1999 3267 2.877691 GATTGTGTTGGCGCTCCC 59.122 61.111 7.64 0.00 0.00 4.30
2000 3268 2.325082 ACGATTGTGTTGGCGCTCC 61.325 57.895 7.64 0.00 0.00 4.70
2001 3269 1.154413 CACGATTGTGTTGGCGCTC 60.154 57.895 7.64 0.00 41.34 5.03
2002 3270 2.945984 CACGATTGTGTTGGCGCT 59.054 55.556 7.64 0.00 41.34 5.92
2011 3279 0.807667 GAGATGCTCCGCACGATTGT 60.808 55.000 0.00 0.00 43.04 2.71
2012 3280 1.815212 CGAGATGCTCCGCACGATTG 61.815 60.000 0.00 0.00 43.04 2.67
2013 3281 1.589993 CGAGATGCTCCGCACGATT 60.590 57.895 0.00 0.00 43.04 3.34
2014 3282 2.004808 TTCGAGATGCTCCGCACGAT 62.005 55.000 0.00 0.00 43.04 3.73
2015 3283 2.696759 TTCGAGATGCTCCGCACGA 61.697 57.895 0.00 0.00 43.04 4.35
2016 3284 2.202610 TTCGAGATGCTCCGCACG 60.203 61.111 0.00 0.00 43.04 5.34
2017 3285 2.167861 GGTTCGAGATGCTCCGCAC 61.168 63.158 0.00 0.00 43.04 5.34
2018 3286 2.184322 GGTTCGAGATGCTCCGCA 59.816 61.111 0.00 0.00 44.86 5.69
2019 3287 2.586357 GGGTTCGAGATGCTCCGC 60.586 66.667 0.00 0.00 0.00 5.54
2020 3288 1.227089 CTGGGTTCGAGATGCTCCG 60.227 63.158 0.00 0.00 0.00 4.63
2021 3289 1.522580 GCTGGGTTCGAGATGCTCC 60.523 63.158 0.00 0.00 0.00 4.70
2022 3290 0.529555 GAGCTGGGTTCGAGATGCTC 60.530 60.000 0.00 10.48 39.74 4.26
2023 3291 1.519719 GAGCTGGGTTCGAGATGCT 59.480 57.895 0.00 0.00 0.00 3.79
2024 3292 1.522580 GGAGCTGGGTTCGAGATGC 60.523 63.158 0.00 0.00 0.00 3.91
2025 3293 0.103937 GAGGAGCTGGGTTCGAGATG 59.896 60.000 0.00 0.00 0.00 2.90
2026 3294 1.388065 CGAGGAGCTGGGTTCGAGAT 61.388 60.000 0.00 0.00 35.19 2.75
2027 3295 2.046864 CGAGGAGCTGGGTTCGAGA 61.047 63.158 0.00 0.00 35.19 4.04
2028 3296 2.492090 CGAGGAGCTGGGTTCGAG 59.508 66.667 0.00 0.00 35.19 4.04
2029 3297 3.760035 GCGAGGAGCTGGGTTCGA 61.760 66.667 0.00 0.00 44.04 3.71
2047 3315 4.244802 CTCTCGACTCCGCTCCGC 62.245 72.222 0.00 0.00 35.37 5.54
2048 3316 2.815298 GACTCTCGACTCCGCTCCG 61.815 68.421 0.00 0.00 35.37 4.63
2049 3317 2.474612 GGACTCTCGACTCCGCTCC 61.475 68.421 0.00 0.00 35.37 4.70
2050 3318 2.815298 CGGACTCTCGACTCCGCTC 61.815 68.421 8.16 0.00 42.86 5.03
2051 3319 2.820479 CGGACTCTCGACTCCGCT 60.820 66.667 8.16 0.00 42.86 5.52
2052 3320 3.878519 CCGGACTCTCGACTCCGC 61.879 72.222 13.61 0.00 46.83 5.54
2054 3322 0.812412 CTCTCCGGACTCTCGACTCC 60.812 65.000 0.00 0.00 0.00 3.85
2055 3323 1.433837 GCTCTCCGGACTCTCGACTC 61.434 65.000 0.00 0.00 0.00 3.36
2056 3324 1.450669 GCTCTCCGGACTCTCGACT 60.451 63.158 0.00 0.00 0.00 4.18
2057 3325 1.027792 AAGCTCTCCGGACTCTCGAC 61.028 60.000 0.00 0.00 0.00 4.20
2058 3326 0.745128 GAAGCTCTCCGGACTCTCGA 60.745 60.000 0.00 0.00 0.00 4.04
2059 3327 1.720694 GGAAGCTCTCCGGACTCTCG 61.721 65.000 0.00 0.00 33.37 4.04
2060 3328 2.112029 GGAAGCTCTCCGGACTCTC 58.888 63.158 0.00 0.00 33.37 3.20
2061 3329 4.347865 GGAAGCTCTCCGGACTCT 57.652 61.111 0.00 0.00 33.37 3.24
2068 3336 0.037447 AGCCTGTTTGGAAGCTCTCC 59.963 55.000 7.71 7.71 45.64 3.71
2069 3337 1.447945 GAGCCTGTTTGGAAGCTCTC 58.552 55.000 3.69 0.00 46.50 3.20
2070 3338 3.641017 GAGCCTGTTTGGAAGCTCT 57.359 52.632 3.69 0.00 46.50 4.09
2072 3340 2.373502 ACTAAGAGCCTGTTTGGAAGCT 59.626 45.455 0.00 0.00 38.35 3.74
2073 3341 2.784347 ACTAAGAGCCTGTTTGGAAGC 58.216 47.619 0.00 0.00 38.35 3.86
2074 3342 4.137543 ACAACTAAGAGCCTGTTTGGAAG 58.862 43.478 0.00 0.00 38.35 3.46
2075 3343 4.164843 ACAACTAAGAGCCTGTTTGGAA 57.835 40.909 0.00 0.00 38.35 3.53
2076 3344 3.857157 ACAACTAAGAGCCTGTTTGGA 57.143 42.857 0.00 0.00 38.35 3.53
2077 3345 5.619981 GCATAACAACTAAGAGCCTGTTTGG 60.620 44.000 0.00 0.00 34.08 3.28
2078 3346 5.182001 AGCATAACAACTAAGAGCCTGTTTG 59.818 40.000 0.00 0.00 34.08 2.93
2079 3347 5.316987 AGCATAACAACTAAGAGCCTGTTT 58.683 37.500 0.00 0.00 34.08 2.83
2080 3348 4.911390 AGCATAACAACTAAGAGCCTGTT 58.089 39.130 0.00 0.00 36.11 3.16
2081 3349 4.559862 AGCATAACAACTAAGAGCCTGT 57.440 40.909 0.00 0.00 0.00 4.00
2082 3350 4.697352 ACAAGCATAACAACTAAGAGCCTG 59.303 41.667 0.00 0.00 0.00 4.85
2083 3351 4.911390 ACAAGCATAACAACTAAGAGCCT 58.089 39.130 0.00 0.00 0.00 4.58
2084 3352 5.629079 AACAAGCATAACAACTAAGAGCC 57.371 39.130 0.00 0.00 0.00 4.70
2085 3353 6.251549 GCTAACAAGCATAACAACTAAGAGC 58.748 40.000 0.00 0.00 34.41 4.09
2086 3354 6.595716 AGGCTAACAAGCATAACAACTAAGAG 59.404 38.462 0.00 0.00 36.33 2.85
2087 3355 6.472887 AGGCTAACAAGCATAACAACTAAGA 58.527 36.000 0.00 0.00 36.33 2.10
2088 3356 6.743575 AGGCTAACAAGCATAACAACTAAG 57.256 37.500 0.00 0.00 36.33 2.18
2089 3357 7.201696 GCATAGGCTAACAAGCATAACAACTAA 60.202 37.037 0.00 0.00 34.68 2.24
2176 3444 9.710900 AGGATATTTGTTTCATTTTTCCTGAAC 57.289 29.630 0.00 0.00 32.57 3.18
2203 3471 0.304705 GTTCAACACCTGTGCACTCG 59.695 55.000 19.41 10.24 0.00 4.18
2376 3644 0.893727 AGCCTTTGGGTTTACCGCAG 60.894 55.000 0.00 0.00 44.64 5.18
2518 3790 3.059597 CACAAACTAGAAGCTGGAACACG 60.060 47.826 0.00 0.00 0.00 4.49
2519 3791 3.304057 GCACAAACTAGAAGCTGGAACAC 60.304 47.826 0.00 0.00 0.00 3.32
2548 3820 1.725641 TGTTCGTGTCCAGATCATGC 58.274 50.000 0.00 0.00 0.00 4.06
2562 3834 2.029020 TCTGAGGTTGAGTCCATGTTCG 60.029 50.000 0.00 0.00 0.00 3.95
2615 3887 3.708563 AAACTTTGGTTCATGGACACG 57.291 42.857 6.44 0.00 34.14 4.49
2743 4015 3.569701 TGTTCTTCTCCATGCTCCAAAAC 59.430 43.478 0.00 0.00 0.00 2.43
2841 4117 6.872920 TCAAATTGTTAGTTGAAACAGGCTT 58.127 32.000 0.00 0.00 40.29 4.35
2842 4118 6.463995 TCAAATTGTTAGTTGAAACAGGCT 57.536 33.333 0.00 0.00 40.29 4.58
2844 4120 7.432869 TGGATCAAATTGTTAGTTGAAACAGG 58.567 34.615 0.00 0.00 41.17 4.00
3002 4278 1.890876 AAAAGCGCTGTCCACATACA 58.109 45.000 12.58 0.00 0.00 2.29
3027 4303 4.896482 TCTATAAGCTCCTCCTTCAACCTC 59.104 45.833 0.00 0.00 0.00 3.85
3042 4318 7.604545 ACTTTCTTCTTCACCACTTCTATAAGC 59.395 37.037 0.00 0.00 36.05 3.09
3079 4355 5.511571 GTTGTTTGCTTTAGACTTCTCCAC 58.488 41.667 0.00 0.00 0.00 4.02
3091 4367 0.318614 CCATCGGCGTTGTTTGCTTT 60.319 50.000 15.96 0.00 0.00 3.51
3110 4386 0.955428 TGCACTTGATTCGGCCTCAC 60.955 55.000 0.00 0.00 0.00 3.51
3163 4439 8.940397 ATGTTAAGGGGTATTATTTGGATCTG 57.060 34.615 0.00 0.00 0.00 2.90
3354 4630 2.122167 GCTCCCGTCTCGTCAGGAT 61.122 63.158 0.00 0.00 0.00 3.24
3361 4637 0.030101 GATGAGAAGCTCCCGTCTCG 59.970 60.000 8.29 0.00 45.79 4.04
3374 4650 3.509967 TGCCAGTAACTTCTTCGATGAGA 59.490 43.478 0.94 0.00 0.00 3.27
3402 4678 3.866651 CAGTTTTCAGGATGTCGGAGAT 58.133 45.455 0.00 0.00 40.67 2.75
3408 4684 1.177401 GGGGCAGTTTTCAGGATGTC 58.823 55.000 0.00 0.00 37.40 3.06
3429 4705 2.947652 CAATTTCCAGCATGTCGGAGAT 59.052 45.455 5.53 4.53 40.67 2.75
3485 4761 9.072294 CACCTGAAAGTTTTAACTGTAGTTTTG 57.928 33.333 2.20 0.00 39.66 2.44
3626 4911 1.234615 ATCCAGCAAACGAACCCACG 61.235 55.000 0.00 0.00 39.31 4.94
3632 4917 2.159393 GCAAGCATATCCAGCAAACGAA 60.159 45.455 0.00 0.00 0.00 3.85
3676 4961 2.184322 CGACCACACCTCATCGGG 59.816 66.667 0.00 0.00 36.97 5.14
3692 4977 5.247507 TGCTCATATTTCCAACAAATCCG 57.752 39.130 0.00 0.00 0.00 4.18
3799 5086 3.314635 GCAGATGCCATTTACCTTCTCTG 59.685 47.826 0.00 0.00 34.31 3.35
3886 5173 6.365247 GTGCGTTCTCATACTCTTTCTGTTTA 59.635 38.462 0.00 0.00 0.00 2.01
3909 5196 2.664851 TTCTGCCGCTGTTCCGTG 60.665 61.111 0.00 0.00 0.00 4.94
3933 5220 1.935327 GAGGACGTCGACCCCAAGAG 61.935 65.000 19.85 3.98 0.00 2.85
3999 5286 0.794473 GACGGCCACTTTTCTAACGG 59.206 55.000 2.24 0.00 0.00 4.44
4004 5291 1.597027 CACCGACGGCCACTTTTCT 60.597 57.895 15.39 0.00 0.00 2.52
4006 5293 1.890510 GACACCGACGGCCACTTTT 60.891 57.895 15.39 0.00 0.00 2.27
4007 5294 2.280592 GACACCGACGGCCACTTT 60.281 61.111 15.39 0.00 0.00 2.66
4014 5301 1.349259 GACGATTTGGACACCGACGG 61.349 60.000 13.61 13.61 0.00 4.79
4082 5370 1.204231 GTCCTGTACGGGAGAAAGGTC 59.796 57.143 24.28 6.59 35.87 3.85
4086 5374 2.297698 TGAGTCCTGTACGGGAGAAA 57.702 50.000 24.28 9.23 35.87 2.52
4113 5401 2.370849 GACAGTAGACCTCCAAAACCCA 59.629 50.000 0.00 0.00 0.00 4.51
4120 5408 0.323178 GTCGGGACAGTAGACCTCCA 60.323 60.000 0.00 0.00 0.00 3.86
4126 5414 2.044555 CGCAGGTCGGGACAGTAGA 61.045 63.158 0.75 0.00 33.78 2.59
4172 5460 0.826715 TCTAAGCTGCTCCTGCGATT 59.173 50.000 1.00 0.00 43.34 3.34
4188 5476 1.480954 GCCACCGAGTTCCAATCTCTA 59.519 52.381 0.00 0.00 0.00 2.43
4229 5518 2.415357 GCTCCTTTCGAGAGAGACACAG 60.415 54.545 4.19 0.00 41.63 3.66
4300 5589 2.300437 CTCCCTCTCTTCGTTTCACCTT 59.700 50.000 0.00 0.00 0.00 3.50
4347 5636 4.881273 GGTTGCAGGGAAGTTGAAATTTTT 59.119 37.500 0.00 0.00 0.00 1.94
4348 5637 4.164030 AGGTTGCAGGGAAGTTGAAATTTT 59.836 37.500 0.00 0.00 0.00 1.82
4349 5638 3.711190 AGGTTGCAGGGAAGTTGAAATTT 59.289 39.130 0.00 0.00 0.00 1.82
4350 5639 3.308401 AGGTTGCAGGGAAGTTGAAATT 58.692 40.909 0.00 0.00 0.00 1.82
4351 5640 2.962859 AGGTTGCAGGGAAGTTGAAAT 58.037 42.857 0.00 0.00 0.00 2.17
4352 5641 2.452600 AGGTTGCAGGGAAGTTGAAA 57.547 45.000 0.00 0.00 0.00 2.69
4353 5642 2.452600 AAGGTTGCAGGGAAGTTGAA 57.547 45.000 0.00 0.00 0.00 2.69
4354 5643 2.430332 CAAAAGGTTGCAGGGAAGTTGA 59.570 45.455 0.00 0.00 0.00 3.18
4355 5644 2.168313 ACAAAAGGTTGCAGGGAAGTTG 59.832 45.455 0.00 0.00 38.39 3.16
4356 5645 2.466846 ACAAAAGGTTGCAGGGAAGTT 58.533 42.857 0.00 0.00 38.39 2.66
4357 5646 2.159179 ACAAAAGGTTGCAGGGAAGT 57.841 45.000 0.00 0.00 38.39 3.01
4358 5647 4.157840 GGTATACAAAAGGTTGCAGGGAAG 59.842 45.833 5.01 0.00 38.39 3.46
4359 5648 4.083565 GGTATACAAAAGGTTGCAGGGAA 58.916 43.478 5.01 0.00 38.39 3.97
4360 5649 3.074687 TGGTATACAAAAGGTTGCAGGGA 59.925 43.478 5.01 0.00 38.39 4.20
4361 5650 3.426615 TGGTATACAAAAGGTTGCAGGG 58.573 45.455 5.01 0.00 38.39 4.45
4362 5651 4.079253 ACTGGTATACAAAAGGTTGCAGG 58.921 43.478 5.01 0.00 38.39 4.85
4363 5652 4.142902 CGACTGGTATACAAAAGGTTGCAG 60.143 45.833 5.01 2.20 38.39 4.41
4364 5653 3.749088 CGACTGGTATACAAAAGGTTGCA 59.251 43.478 5.01 0.00 38.39 4.08
4365 5654 3.749609 ACGACTGGTATACAAAAGGTTGC 59.250 43.478 5.01 0.00 38.39 4.17
4366 5655 4.753107 ACACGACTGGTATACAAAAGGTTG 59.247 41.667 5.01 2.72 40.84 3.77
4367 5656 4.753107 CACACGACTGGTATACAAAAGGTT 59.247 41.667 5.01 0.00 0.00 3.50
4368 5657 4.312443 CACACGACTGGTATACAAAAGGT 58.688 43.478 5.01 0.00 0.00 3.50
4369 5658 3.682858 CCACACGACTGGTATACAAAAGG 59.317 47.826 5.01 0.00 0.00 3.11
4370 5659 3.124636 GCCACACGACTGGTATACAAAAG 59.875 47.826 5.01 1.82 33.30 2.27
4371 5660 3.068560 GCCACACGACTGGTATACAAAA 58.931 45.455 5.01 0.00 33.30 2.44
4372 5661 2.037381 TGCCACACGACTGGTATACAAA 59.963 45.455 5.01 0.00 33.30 2.83
4373 5662 1.619332 TGCCACACGACTGGTATACAA 59.381 47.619 5.01 0.00 33.30 2.41
4374 5663 1.258676 TGCCACACGACTGGTATACA 58.741 50.000 5.01 0.00 33.30 2.29
4375 5664 2.373540 TTGCCACACGACTGGTATAC 57.626 50.000 0.00 0.00 33.30 1.47
4376 5665 3.404224 TTTTGCCACACGACTGGTATA 57.596 42.857 0.00 0.00 33.30 1.47
4377 5666 2.264005 TTTTGCCACACGACTGGTAT 57.736 45.000 0.00 0.00 33.30 2.73
4378 5667 2.039818 TTTTTGCCACACGACTGGTA 57.960 45.000 0.00 0.00 33.30 3.25
4379 5668 2.875188 TTTTTGCCACACGACTGGT 58.125 47.368 0.00 0.00 33.30 4.00
4394 5683 4.220602 AGCCAAGCCGATGTCTAAATTTTT 59.779 37.500 0.00 0.00 0.00 1.94
4395 5684 3.763897 AGCCAAGCCGATGTCTAAATTTT 59.236 39.130 0.00 0.00 0.00 1.82
4396 5685 3.356290 AGCCAAGCCGATGTCTAAATTT 58.644 40.909 0.00 0.00 0.00 1.82
4397 5686 2.945668 GAGCCAAGCCGATGTCTAAATT 59.054 45.455 0.00 0.00 0.00 1.82
4398 5687 2.092968 TGAGCCAAGCCGATGTCTAAAT 60.093 45.455 0.00 0.00 0.00 1.40
4399 5688 1.277842 TGAGCCAAGCCGATGTCTAAA 59.722 47.619 0.00 0.00 0.00 1.85
4400 5689 0.901827 TGAGCCAAGCCGATGTCTAA 59.098 50.000 0.00 0.00 0.00 2.10
4401 5690 1.123077 ATGAGCCAAGCCGATGTCTA 58.877 50.000 0.00 0.00 0.00 2.59
4402 5691 0.254178 AATGAGCCAAGCCGATGTCT 59.746 50.000 0.00 0.00 0.00 3.41
4403 5692 0.659957 GAATGAGCCAAGCCGATGTC 59.340 55.000 0.00 0.00 0.00 3.06
4404 5693 0.749454 GGAATGAGCCAAGCCGATGT 60.749 55.000 0.00 0.00 0.00 3.06
4405 5694 1.450531 GGGAATGAGCCAAGCCGATG 61.451 60.000 0.00 0.00 0.00 3.84
4406 5695 1.152881 GGGAATGAGCCAAGCCGAT 60.153 57.895 0.00 0.00 0.00 4.18
4407 5696 2.272146 GGGAATGAGCCAAGCCGA 59.728 61.111 0.00 0.00 0.00 5.54
4408 5697 3.204827 CGGGAATGAGCCAAGCCG 61.205 66.667 0.00 0.00 0.00 5.52
4409 5698 3.521796 GCGGGAATGAGCCAAGCC 61.522 66.667 0.00 0.00 0.00 4.35
4410 5699 2.342650 TTGCGGGAATGAGCCAAGC 61.343 57.895 0.00 0.00 34.87 4.01
4411 5700 1.508088 GTTGCGGGAATGAGCCAAG 59.492 57.895 0.00 0.00 0.00 3.61
4412 5701 1.976474 GGTTGCGGGAATGAGCCAA 60.976 57.895 0.00 0.00 0.00 4.52
4413 5702 2.361104 GGTTGCGGGAATGAGCCA 60.361 61.111 0.00 0.00 0.00 4.75
4414 5703 3.140814 GGGTTGCGGGAATGAGCC 61.141 66.667 0.00 0.00 0.00 4.70
4415 5704 3.508840 CGGGTTGCGGGAATGAGC 61.509 66.667 0.00 0.00 0.00 4.26
4416 5705 3.508840 GCGGGTTGCGGGAATGAG 61.509 66.667 0.00 0.00 0.00 2.90
4439 5728 2.799916 GCCTCGTCACGACACGTC 60.800 66.667 0.00 0.00 38.32 4.34
4440 5729 4.678269 CGCCTCGTCACGACACGT 62.678 66.667 0.00 0.00 42.36 4.49
4442 5731 4.034258 TCCGCCTCGTCACGACAC 62.034 66.667 0.00 0.00 0.00 3.67
4443 5732 4.034258 GTCCGCCTCGTCACGACA 62.034 66.667 0.00 0.00 0.00 4.35
4444 5733 4.034258 TGTCCGCCTCGTCACGAC 62.034 66.667 0.00 0.00 0.00 4.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.