Multiple sequence alignment - TraesCS6A01G112400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G112400 chr6A 100.000 1309 0 0 2414 3722 81257719 81256411 0.000000e+00 2418.0
1 TraesCS6A01G112400 chr6A 100.000 1295 0 0 1 1295 81260132 81258838 0.000000e+00 2392.0
2 TraesCS6A01G112400 chr6A 90.027 371 34 3 926 1295 91423638 91424006 9.350000e-131 477.0
3 TraesCS6A01G112400 chr6A 92.453 318 24 0 2414 2731 107701087 107700770 4.380000e-124 455.0
4 TraesCS6A01G112400 chr6A 92.038 314 25 0 2414 2727 107692568 107692255 3.410000e-120 442.0
5 TraesCS6A01G112400 chr6A 87.709 358 40 4 940 1295 107692782 107692427 7.440000e-112 414.0
6 TraesCS6A01G112400 chr6A 87.187 359 40 6 940 1295 107701301 107700946 1.610000e-108 403.0
7 TraesCS6A01G112400 chr6A 89.844 256 20 2 3471 3720 61734177 61733922 1.290000e-84 324.0
8 TraesCS6A01G112400 chr6A 90.551 127 7 1 3462 3583 596161458 596161332 2.970000e-36 163.0
9 TraesCS6A01G112400 chr6A 89.764 127 8 2 3462 3583 614259196 614259322 1.380000e-34 158.0
10 TraesCS6A01G112400 chr6A 93.137 102 6 1 3145 3245 596161939 596161838 8.330000e-32 148.0
11 TraesCS6A01G112400 chr6A 94.667 75 4 0 3648 3722 596161202 596161128 2.350000e-22 117.0
12 TraesCS6A01G112400 chr6A 93.750 64 4 0 3658 3721 596161457 596161394 3.060000e-16 97.1
13 TraesCS6A01G112400 chr6B 84.312 1345 109 48 1 1295 139895533 139894241 0.000000e+00 1221.0
14 TraesCS6A01G112400 chr6B 93.096 449 25 3 2414 2861 139893588 139893145 0.000000e+00 652.0
15 TraesCS6A01G112400 chr6B 91.375 371 29 3 926 1295 149055111 149055479 4.290000e-139 505.0
16 TraesCS6A01G112400 chr6B 94.586 314 17 0 2414 2727 149055566 149055879 1.550000e-133 486.0
17 TraesCS6A01G112400 chr6B 91.824 318 26 0 2414 2731 171768488 171768171 9.490000e-121 444.0
18 TraesCS6A01G112400 chr6B 87.692 260 14 8 3433 3684 139892475 139892226 1.690000e-73 287.0
19 TraesCS6A01G112400 chr6B 92.126 127 5 1 3462 3583 684384104 684383978 1.370000e-39 174.0
20 TraesCS6A01G112400 chr6B 87.879 132 11 5 3134 3263 684384668 684384540 2.320000e-32 150.0
21 TraesCS6A01G112400 chr6B 92.000 100 6 1 2829 2928 139893085 139892988 5.010000e-29 139.0
22 TraesCS6A01G112400 chr6B 87.500 120 5 2 3209 3318 139892766 139892647 3.020000e-26 130.0
23 TraesCS6A01G112400 chr6B 89.320 103 10 1 3152 3253 713863976 713864078 1.090000e-25 128.0
24 TraesCS6A01G112400 chr6B 86.726 113 13 2 3152 3263 713310415 713310526 1.400000e-24 124.0
25 TraesCS6A01G112400 chr6B 85.841 113 14 2 3152 3263 713517696 713517807 6.530000e-23 119.0
26 TraesCS6A01G112400 chr6D 89.770 391 34 4 910 1295 75372219 75372608 2.580000e-136 496.0
27 TraesCS6A01G112400 chr6D 92.810 306 22 0 2426 2731 89355618 89355313 9.490000e-121 444.0
28 TraesCS6A01G112400 chr6D 90.881 318 29 0 2414 2731 89365698 89365381 9.550000e-116 427.0
29 TraesCS6A01G112400 chr6D 87.500 360 37 7 940 1295 89356336 89355981 3.460000e-110 409.0
30 TraesCS6A01G112400 chr6D 88.446 251 23 2 3462 3706 53581167 53581417 7.810000e-77 298.0
31 TraesCS6A01G112400 chr6D 94.068 118 2 1 3471 3583 450640028 450639911 1.370000e-39 174.0
32 TraesCS6A01G112400 chr6D 94.118 102 4 2 3155 3254 450640609 450640508 1.790000e-33 154.0
33 TraesCS6A01G112400 chr6D 94.667 75 4 0 3648 3722 450639820 450639746 2.350000e-22 117.0
34 TraesCS6A01G112400 chr2D 92.114 317 25 0 2414 2730 520583144 520582828 7.330000e-122 448.0
35 TraesCS6A01G112400 chr2D 88.102 353 37 5 946 1295 520583579 520583229 7.440000e-112 414.0
36 TraesCS6A01G112400 chr2B 88.441 372 38 5 927 1295 613037740 613037371 9.490000e-121 444.0
37 TraesCS6A01G112400 chr2A 91.824 318 26 0 2414 2731 665990453 665990136 9.490000e-121 444.0
38 TraesCS6A01G112400 chr5B 86.087 230 21 4 3436 3659 441635994 441636218 1.730000e-58 237.0
39 TraesCS6A01G112400 chr5A 86.087 230 21 4 3436 3659 474814432 474814656 1.730000e-58 237.0
40 TraesCS6A01G112400 chr4A 86.525 141 11 4 3446 3579 34265740 34265879 8.330000e-32 148.0
41 TraesCS6A01G112400 chr7D 89.000 100 9 2 3148 3245 549548396 549548495 5.050000e-24 122.0
42 TraesCS6A01G112400 chr1A 90.323 93 7 2 3155 3245 533779288 533779196 1.820000e-23 121.0
43 TraesCS6A01G112400 chr1D 87.629 97 9 3 3151 3245 436971948 436971853 3.930000e-20 110.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G112400 chr6A 81256411 81260132 3721 True 2405.0 2418 100.0000 1 3722 2 chr6A.!!$R2 3721
1 TraesCS6A01G112400 chr6A 107700770 107701301 531 True 429.0 455 89.8200 940 2731 2 chr6A.!!$R4 1791
2 TraesCS6A01G112400 chr6A 107692255 107692782 527 True 428.0 442 89.8735 940 2727 2 chr6A.!!$R3 1787
3 TraesCS6A01G112400 chr6B 149055111 149055879 768 False 495.5 505 92.9805 926 2727 2 chr6B.!!$F4 1801
4 TraesCS6A01G112400 chr6B 139892226 139895533 3307 True 485.8 1221 88.9200 1 3684 5 chr6B.!!$R2 3683
5 TraesCS6A01G112400 chr6D 89355313 89356336 1023 True 426.5 444 90.1550 940 2731 2 chr6D.!!$R2 1791
6 TraesCS6A01G112400 chr2D 520582828 520583579 751 True 431.0 448 90.1080 946 2730 2 chr2D.!!$R1 1784

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
458 484 0.318191 ATCCGTCGCTCGTGATCATG 60.318 55.0 8.74 8.74 37.94 3.07 F
1263 1808 0.764369 AGACCCTCACTGGCAAGACA 60.764 55.0 0.00 0.00 0.00 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2457 3002 0.033504 GACGCAGGACAAGGTGAAGA 59.966 55.0 0.0 0.0 0.0 2.87 R
2994 3854 0.250684 TCAGATCACAAAAGGCCGCA 60.251 50.0 0.0 0.0 0.0 5.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.902846 AGCCGATCTCGTCTCCGG 60.903 66.667 0.00 0.00 44.34 5.14
34 35 3.462678 GTCGACTCCAGCTCCCCC 61.463 72.222 8.70 0.00 0.00 5.40
47 48 4.862823 CCCCCTCCTCCGGTCCTC 62.863 77.778 0.00 0.00 0.00 3.71
73 74 2.587889 CCCCAAGGTACGGCGATT 59.412 61.111 16.62 0.00 0.00 3.34
98 99 2.832201 CCTCTCCCCGTACCGTCC 60.832 72.222 0.00 0.00 0.00 4.79
109 110 1.678635 TACCGTCCGGATCCACGTT 60.679 57.895 19.78 11.00 38.96 3.99
133 134 4.127171 CCGTGGTAGTTGGAGGATTATTG 58.873 47.826 0.00 0.00 0.00 1.90
137 138 3.433173 GGTAGTTGGAGGATTATTGCCGT 60.433 47.826 0.00 0.00 0.00 5.68
154 155 0.797542 CGTCGAATTTTGCCCGGTTA 59.202 50.000 0.00 0.00 0.00 2.85
217 218 6.551812 CGATCAATCGCTCATGTTAGATAG 57.448 41.667 0.00 0.00 43.84 2.08
218 219 5.004251 CGATCAATCGCTCATGTTAGATAGC 59.996 44.000 0.00 0.00 43.84 2.97
219 220 5.459536 TCAATCGCTCATGTTAGATAGCT 57.540 39.130 0.00 0.00 32.73 3.32
220 221 5.225642 TCAATCGCTCATGTTAGATAGCTG 58.774 41.667 0.00 0.00 32.73 4.24
221 222 5.010012 TCAATCGCTCATGTTAGATAGCTGA 59.990 40.000 0.00 0.00 32.73 4.26
222 223 4.918810 TCGCTCATGTTAGATAGCTGAA 57.081 40.909 0.00 0.00 32.73 3.02
223 224 4.864633 TCGCTCATGTTAGATAGCTGAAG 58.135 43.478 0.00 0.00 32.73 3.02
224 225 3.428198 CGCTCATGTTAGATAGCTGAAGC 59.572 47.826 0.00 0.00 42.49 3.86
262 263 8.083462 TCGTAGGAATTATGCGTGTATATGAAA 58.917 33.333 0.00 0.00 0.00 2.69
263 264 8.869897 CGTAGGAATTATGCGTGTATATGAAAT 58.130 33.333 0.00 0.00 0.00 2.17
267 268 8.865978 GGAATTATGCGTGTATATGAAATCGTA 58.134 33.333 0.00 0.00 0.00 3.43
285 286 2.897969 CGTAGGGGTTATGCCTGTAGAT 59.102 50.000 0.00 0.00 37.43 1.98
294 295 2.363788 TGCCTGTAGATGTCGTGTTC 57.636 50.000 0.00 0.00 0.00 3.18
296 297 2.094700 TGCCTGTAGATGTCGTGTTCTC 60.095 50.000 0.00 0.00 0.00 2.87
297 298 2.735762 GCCTGTAGATGTCGTGTTCTCC 60.736 54.545 0.00 0.00 0.00 3.71
298 299 2.159226 CCTGTAGATGTCGTGTTCTCCC 60.159 54.545 0.00 0.00 0.00 4.30
299 300 2.492088 CTGTAGATGTCGTGTTCTCCCA 59.508 50.000 0.00 0.00 0.00 4.37
300 301 2.894765 TGTAGATGTCGTGTTCTCCCAA 59.105 45.455 0.00 0.00 0.00 4.12
317 339 2.611971 CCCAAATCTGTTCGTCTTCGGA 60.612 50.000 0.00 0.00 37.69 4.55
323 345 0.320374 TGTTCGTCTTCGGAGCCAAT 59.680 50.000 0.00 0.00 37.69 3.16
330 352 3.209410 GTCTTCGGAGCCAATTCATGAT 58.791 45.455 0.00 0.00 0.00 2.45
338 360 1.268896 GCCAATTCATGATGCCGTCTG 60.269 52.381 0.00 0.00 0.00 3.51
358 380 6.202379 CGTCTGATCTCATATGCATGTTTTCT 59.798 38.462 10.16 0.00 33.57 2.52
360 382 7.441760 GTCTGATCTCATATGCATGTTTTCTCT 59.558 37.037 10.16 0.00 33.57 3.10
365 391 8.016301 TCTCATATGCATGTTTTCTCTCTACT 57.984 34.615 10.16 0.00 33.57 2.57
372 398 5.393243 GCATGTTTTCTCTCTACTAGGACGT 60.393 44.000 0.00 0.00 0.00 4.34
395 421 2.219674 CGTTCCTGCTTGATAGATTCGC 59.780 50.000 0.00 0.00 0.00 4.70
396 422 3.462021 GTTCCTGCTTGATAGATTCGCT 58.538 45.455 0.00 0.00 0.00 4.93
397 423 3.827008 TCCTGCTTGATAGATTCGCTT 57.173 42.857 0.00 0.00 0.00 4.68
408 434 7.936950 TGATAGATTCGCTTAAGTCTTCATG 57.063 36.000 4.02 0.00 0.00 3.07
409 435 7.716612 TGATAGATTCGCTTAAGTCTTCATGA 58.283 34.615 4.02 0.00 0.00 3.07
412 438 5.689514 AGATTCGCTTAAGTCTTCATGATCG 59.310 40.000 4.02 0.00 0.00 3.69
413 439 4.632538 TCGCTTAAGTCTTCATGATCGA 57.367 40.909 4.02 0.00 0.00 3.59
414 440 4.993905 TCGCTTAAGTCTTCATGATCGAA 58.006 39.130 4.02 0.00 0.00 3.71
416 442 5.687730 TCGCTTAAGTCTTCATGATCGAATC 59.312 40.000 4.02 0.00 0.00 2.52
417 443 5.107683 CGCTTAAGTCTTCATGATCGAATCC 60.108 44.000 4.02 0.00 0.00 3.01
418 444 5.755375 GCTTAAGTCTTCATGATCGAATCCA 59.245 40.000 4.02 0.00 0.00 3.41
419 445 6.073873 GCTTAAGTCTTCATGATCGAATCCAG 60.074 42.308 4.02 0.00 0.00 3.86
421 447 6.471233 AAGTCTTCATGATCGAATCCAGTA 57.529 37.500 0.00 0.00 0.00 2.74
422 448 6.083098 AGTCTTCATGATCGAATCCAGTAG 57.917 41.667 0.00 0.00 0.00 2.57
423 449 5.596361 AGTCTTCATGATCGAATCCAGTAGT 59.404 40.000 0.00 0.00 0.00 2.73
424 450 6.773200 AGTCTTCATGATCGAATCCAGTAGTA 59.227 38.462 0.00 0.00 0.00 1.82
425 451 7.040755 AGTCTTCATGATCGAATCCAGTAGTAG 60.041 40.741 0.00 0.00 0.00 2.57
426 452 5.378292 TCATGATCGAATCCAGTAGTAGC 57.622 43.478 0.00 0.00 0.00 3.58
427 453 5.073428 TCATGATCGAATCCAGTAGTAGCT 58.927 41.667 0.00 0.00 0.00 3.32
428 454 5.536538 TCATGATCGAATCCAGTAGTAGCTT 59.463 40.000 0.00 0.00 0.00 3.74
429 455 5.854010 TGATCGAATCCAGTAGTAGCTTT 57.146 39.130 0.00 0.00 0.00 3.51
430 456 5.592054 TGATCGAATCCAGTAGTAGCTTTG 58.408 41.667 0.00 0.00 0.00 2.77
458 484 0.318191 ATCCGTCGCTCGTGATCATG 60.318 55.000 8.74 8.74 37.94 3.07
466 492 2.028523 CGCTCGTGATCATGTTCTTGTC 59.971 50.000 14.52 0.00 0.00 3.18
483 509 1.101331 GTCGTACCAGGATCGTCCTT 58.899 55.000 0.00 0.00 46.91 3.36
486 512 3.129287 GTCGTACCAGGATCGTCCTTAAA 59.871 47.826 0.00 0.00 46.91 1.52
487 513 3.129287 TCGTACCAGGATCGTCCTTAAAC 59.871 47.826 0.00 2.94 46.91 2.01
489 515 3.889520 ACCAGGATCGTCCTTAAACTC 57.110 47.619 0.00 0.00 46.91 3.01
490 516 2.500504 ACCAGGATCGTCCTTAAACTCC 59.499 50.000 0.00 0.00 46.91 3.85
491 517 2.766828 CCAGGATCGTCCTTAAACTCCT 59.233 50.000 4.08 0.00 46.91 3.69
492 518 3.197983 CCAGGATCGTCCTTAAACTCCTT 59.802 47.826 4.08 0.00 46.91 3.36
493 519 4.404715 CCAGGATCGTCCTTAAACTCCTTA 59.595 45.833 4.08 0.00 46.91 2.69
494 520 5.070580 CCAGGATCGTCCTTAAACTCCTTAT 59.929 44.000 4.08 0.00 46.91 1.73
495 521 6.267014 CCAGGATCGTCCTTAAACTCCTTATA 59.733 42.308 4.08 0.00 46.91 0.98
496 522 7.371936 CAGGATCGTCCTTAAACTCCTTATAG 58.628 42.308 4.08 0.00 46.91 1.31
497 523 6.494146 AGGATCGTCCTTAAACTCCTTATAGG 59.506 42.308 1.23 0.00 46.91 2.57
498 524 5.526506 TCGTCCTTAAACTCCTTATAGGC 57.473 43.478 0.00 0.00 34.61 3.93
499 525 4.343239 TCGTCCTTAAACTCCTTATAGGCC 59.657 45.833 0.00 0.00 34.61 5.19
500 526 4.344390 CGTCCTTAAACTCCTTATAGGCCT 59.656 45.833 11.78 11.78 34.61 5.19
501 527 5.537674 CGTCCTTAAACTCCTTATAGGCCTA 59.462 44.000 16.60 16.60 34.61 3.93
502 528 6.294620 CGTCCTTAAACTCCTTATAGGCCTAG 60.295 46.154 19.33 7.57 34.61 3.02
503 529 6.014413 GTCCTTAAACTCCTTATAGGCCTAGG 60.014 46.154 19.33 16.13 34.61 3.02
504 530 6.082707 CCTTAAACTCCTTATAGGCCTAGGA 58.917 44.000 19.72 19.72 34.61 2.94
526 552 6.434340 AGGACTAGGATTGTTGATTGTTTTCC 59.566 38.462 0.00 0.00 0.00 3.13
532 558 5.243730 GGATTGTTGATTGTTTTCCCTCTCA 59.756 40.000 0.00 0.00 0.00 3.27
537 563 3.573967 TGATTGTTTTCCCTCTCAAAGCC 59.426 43.478 0.00 0.00 0.00 4.35
546 572 3.054361 TCCCTCTCAAAGCCAGGTTTATC 60.054 47.826 0.00 0.00 0.00 1.75
549 575 4.637977 CCTCTCAAAGCCAGGTTTATCTTC 59.362 45.833 0.00 0.00 0.00 2.87
552 578 7.016153 TCTCAAAGCCAGGTTTATCTTCTTA 57.984 36.000 0.00 0.00 0.00 2.10
555 581 7.458397 TCAAAGCCAGGTTTATCTTCTTAGAA 58.542 34.615 0.00 0.00 33.20 2.10
578 604 9.634021 AGAAGATGATAATATCCGACAGCTATA 57.366 33.333 0.00 0.00 0.00 1.31
583 609 8.171164 TGATAATATCCGACAGCTATATGGAG 57.829 38.462 0.00 0.00 31.10 3.86
584 610 4.927978 ATATCCGACAGCTATATGGAGC 57.072 45.455 0.00 0.00 43.19 4.70
599 627 9.148879 GCTATATGGAGCCCTAGATAAAAGATA 57.851 37.037 0.00 0.00 36.38 1.98
605 633 7.038729 TGGAGCCCTAGATAAAAGATATCTGTG 60.039 40.741 5.86 2.28 35.95 3.66
619 647 7.437713 AGATATCTGTGGATTTTCTGTGGTA 57.562 36.000 3.89 0.00 33.71 3.25
623 651 5.003160 TCTGTGGATTTTCTGTGGTACATG 58.997 41.667 0.00 0.00 44.52 3.21
624 652 4.724399 TGTGGATTTTCTGTGGTACATGT 58.276 39.130 2.69 2.69 44.52 3.21
625 653 5.136828 TGTGGATTTTCTGTGGTACATGTT 58.863 37.500 2.30 0.00 44.52 2.71
645 673 7.389053 ACATGTTCTGTCAGTTCCTCTTTAATC 59.611 37.037 0.00 0.00 29.94 1.75
649 677 9.436957 GTTCTGTCAGTTCCTCTTTAATCAATA 57.563 33.333 0.00 0.00 0.00 1.90
673 701 4.459852 AGGAAAATATACTGCTGCCCAT 57.540 40.909 0.00 0.00 0.00 4.00
681 709 7.601705 AATATACTGCTGCCCATTGTTTATT 57.398 32.000 0.00 0.00 0.00 1.40
684 712 3.445096 ACTGCTGCCCATTGTTTATTCTC 59.555 43.478 0.00 0.00 0.00 2.87
688 716 5.300034 TGCTGCCCATTGTTTATTCTCTATG 59.700 40.000 0.00 0.00 0.00 2.23
698 726 5.523552 TGTTTATTCTCTATGGCGTGATGTG 59.476 40.000 0.00 0.00 0.00 3.21
703 731 5.079689 TCTCTATGGCGTGATGTGTAAAA 57.920 39.130 0.00 0.00 0.00 1.52
709 737 3.187637 TGGCGTGATGTGTAAAAGCTTAC 59.812 43.478 0.00 0.00 38.34 2.34
715 743 7.617122 GCGTGATGTGTAAAAGCTTACAAAATG 60.617 37.037 0.00 0.42 46.91 2.32
720 748 9.703892 ATGTGTAAAAGCTTACAAAATGCATTA 57.296 25.926 13.39 0.00 46.91 1.90
746 774 8.190784 AGTATTTATGATGTTAGTTTGCTTGCC 58.809 33.333 0.00 0.00 0.00 4.52
758 786 2.061509 TGCTTGCCTCATATGCATGT 57.938 45.000 10.16 0.00 38.76 3.21
770 798 7.117523 GCCTCATATGCATGTTTTCTCTACTAG 59.882 40.741 10.16 0.00 33.57 2.57
771 799 8.147058 CCTCATATGCATGTTTTCTCTACTAGT 58.853 37.037 10.16 0.00 33.57 2.57
778 806 7.093992 GCATGTTTTCTCTACTAGTTCTGTCT 58.906 38.462 0.00 0.00 0.00 3.41
785 813 4.857679 TCTACTAGTTCTGTCTTCCTCCC 58.142 47.826 0.00 0.00 0.00 4.30
794 824 5.149584 TCTGTCTTCCTCCCTGATATCTT 57.850 43.478 3.98 0.00 0.00 2.40
805 835 7.507616 TCCTCCCTGATATCTTCTTAAACTCTC 59.492 40.741 3.98 0.00 0.00 3.20
837 867 9.906660 TTGAATCCAATAGTAATTTTGTGTGTC 57.093 29.630 0.00 0.00 0.00 3.67
840 870 9.912634 AATCCAATAGTAATTTTGTGTGTCTTG 57.087 29.630 0.00 0.00 0.00 3.02
841 871 8.458573 TCCAATAGTAATTTTGTGTGTCTTGT 57.541 30.769 0.00 0.00 0.00 3.16
843 873 9.528018 CCAATAGTAATTTTGTGTGTCTTGTTT 57.472 29.630 0.00 0.00 0.00 2.83
892 934 2.460918 CAGAAAATATGCTGCTGCTGC 58.539 47.619 22.51 22.51 40.48 5.25
896 939 1.471119 AATATGCTGCTGCTGCTGTT 58.529 45.000 27.67 17.75 39.81 3.16
907 950 4.573607 TGCTGCTGCTGTTTATTCTCTATG 59.426 41.667 17.00 0.00 40.48 2.23
908 951 4.813161 GCTGCTGCTGTTTATTCTCTATGA 59.187 41.667 8.53 0.00 36.03 2.15
972 1024 2.038659 GGTCTGCTTCTAGAGGCTCAT 58.961 52.381 25.24 4.50 34.20 2.90
973 1025 2.433970 GGTCTGCTTCTAGAGGCTCATT 59.566 50.000 25.24 0.00 34.20 2.57
1026 1079 5.049198 GCAGATCTTTGTGAAGACATTGACA 60.049 40.000 0.00 0.00 44.27 3.58
1215 1760 2.266055 CTCCACCTTGTCCTCCGC 59.734 66.667 0.00 0.00 0.00 5.54
1242 1787 1.674962 GGAGGCATGCAGATCTTTGTC 59.325 52.381 21.36 0.00 0.00 3.18
1263 1808 0.764369 AGACCCTCACTGGCAAGACA 60.764 55.000 0.00 0.00 0.00 3.41
1269 1814 3.411446 CCTCACTGGCAAGACAATTACA 58.589 45.455 0.00 0.00 0.00 2.41
1287 1832 0.962489 CACTTGAGGTGGAGTCGTCT 59.038 55.000 0.00 0.00 41.90 4.18
2478 3023 0.468226 TTCACCTTGTCCTGCGTCTT 59.532 50.000 0.00 0.00 0.00 3.01
2727 3498 1.977594 GCGGTGGTCAGTAATTGCCG 61.978 60.000 0.00 0.00 40.52 5.69
2733 3504 0.802494 GTCAGTAATTGCCGTGGGTG 59.198 55.000 0.00 0.00 0.00 4.61
2754 3525 4.918360 TGGTGGGTGCCCCTGTCT 62.918 66.667 11.10 0.00 45.70 3.41
2755 3526 3.580319 GGTGGGTGCCCCTGTCTT 61.580 66.667 11.10 0.00 45.70 3.01
2756 3527 2.034221 GTGGGTGCCCCTGTCTTC 59.966 66.667 11.10 0.00 45.70 2.87
2758 3529 3.256960 GGGTGCCCCTGTCTTCCA 61.257 66.667 3.16 0.00 41.34 3.53
2776 3548 5.541845 CTTCCATGTGAAGTGTTAGTCTCA 58.458 41.667 13.02 0.00 44.59 3.27
2794 3566 5.305644 AGTCTCATTTGTGTCAAGTCCTACT 59.694 40.000 0.00 0.00 0.00 2.57
2795 3567 6.493802 AGTCTCATTTGTGTCAAGTCCTACTA 59.506 38.462 0.00 0.00 0.00 1.82
2796 3568 7.179338 AGTCTCATTTGTGTCAAGTCCTACTAT 59.821 37.037 0.00 0.00 0.00 2.12
2797 3569 7.489757 GTCTCATTTGTGTCAAGTCCTACTATC 59.510 40.741 0.00 0.00 0.00 2.08
2798 3570 7.178451 TCTCATTTGTGTCAAGTCCTACTATCA 59.822 37.037 0.00 0.00 0.00 2.15
2865 3725 4.664188 GTTTCGTTTAAACAGTTGCTGGA 58.336 39.130 18.07 2.12 45.72 3.86
2895 3755 6.475727 CAGTACGGTCAAGTATGAATAAGTGG 59.524 42.308 0.00 0.00 37.30 4.00
2918 3778 6.116126 GGACTTTGAACTAATCTGCCTATGT 58.884 40.000 0.00 0.00 0.00 2.29
2919 3779 6.037610 GGACTTTGAACTAATCTGCCTATGTG 59.962 42.308 0.00 0.00 0.00 3.21
2920 3780 6.476378 ACTTTGAACTAATCTGCCTATGTGT 58.524 36.000 0.00 0.00 0.00 3.72
2925 3785 9.461312 TTGAACTAATCTGCCTATGTGTATTTT 57.539 29.630 0.00 0.00 0.00 1.82
2929 3789 9.547753 ACTAATCTGCCTATGTGTATTTTACTG 57.452 33.333 0.00 0.00 0.00 2.74
2930 3790 9.547753 CTAATCTGCCTATGTGTATTTTACTGT 57.452 33.333 0.00 0.00 0.00 3.55
2931 3791 8.807948 AATCTGCCTATGTGTATTTTACTGTT 57.192 30.769 0.00 0.00 0.00 3.16
2932 3792 8.807948 ATCTGCCTATGTGTATTTTACTGTTT 57.192 30.769 0.00 0.00 0.00 2.83
2933 3793 8.630054 TCTGCCTATGTGTATTTTACTGTTTT 57.370 30.769 0.00 0.00 0.00 2.43
2934 3794 9.073475 TCTGCCTATGTGTATTTTACTGTTTTT 57.927 29.630 0.00 0.00 0.00 1.94
2964 3824 1.996798 TCCGGTTAAATTGGTTGCCA 58.003 45.000 0.00 0.00 0.00 4.92
2979 3839 6.969993 TGGTTGCCACTTCTAGTTTTTATT 57.030 33.333 0.00 0.00 0.00 1.40
2980 3840 7.354751 TGGTTGCCACTTCTAGTTTTTATTT 57.645 32.000 0.00 0.00 0.00 1.40
2982 3842 6.645003 GGTTGCCACTTCTAGTTTTTATTTGG 59.355 38.462 0.00 0.00 0.00 3.28
2984 3844 5.778862 GCCACTTCTAGTTTTTATTTGGCA 58.221 37.500 3.93 0.00 45.22 4.92
2985 3845 6.220201 GCCACTTCTAGTTTTTATTTGGCAA 58.780 36.000 0.00 0.00 45.22 4.52
2986 3846 6.873605 GCCACTTCTAGTTTTTATTTGGCAAT 59.126 34.615 0.00 0.00 45.22 3.56
2987 3847 7.063426 GCCACTTCTAGTTTTTATTTGGCAATC 59.937 37.037 0.00 0.00 45.22 2.67
2988 3848 8.306761 CCACTTCTAGTTTTTATTTGGCAATCT 58.693 33.333 0.00 0.00 0.00 2.40
2996 3856 8.773645 AGTTTTTATTTGGCAATCTACTTTTGC 58.226 29.630 0.00 0.00 46.82 3.68
3000 3860 3.329114 GCAATCTACTTTTGCGGCC 57.671 52.632 0.00 0.00 39.98 6.13
3001 3861 0.811281 GCAATCTACTTTTGCGGCCT 59.189 50.000 0.00 0.00 39.98 5.19
3002 3862 1.202348 GCAATCTACTTTTGCGGCCTT 59.798 47.619 0.00 0.00 39.98 4.35
3003 3863 2.352715 GCAATCTACTTTTGCGGCCTTT 60.353 45.455 0.00 0.00 39.98 3.11
3004 3864 3.860754 GCAATCTACTTTTGCGGCCTTTT 60.861 43.478 0.00 0.00 39.98 2.27
3005 3865 3.575965 ATCTACTTTTGCGGCCTTTTG 57.424 42.857 0.00 0.00 0.00 2.44
3006 3866 2.303175 TCTACTTTTGCGGCCTTTTGT 58.697 42.857 0.00 0.00 0.00 2.83
3007 3867 2.034053 TCTACTTTTGCGGCCTTTTGTG 59.966 45.455 0.00 0.00 0.00 3.33
3008 3868 0.820871 ACTTTTGCGGCCTTTTGTGA 59.179 45.000 0.00 0.00 0.00 3.58
3009 3869 1.412343 ACTTTTGCGGCCTTTTGTGAT 59.588 42.857 0.00 0.00 0.00 3.06
3010 3870 2.061028 CTTTTGCGGCCTTTTGTGATC 58.939 47.619 0.00 0.00 0.00 2.92
3011 3871 1.327303 TTTGCGGCCTTTTGTGATCT 58.673 45.000 0.00 0.00 0.00 2.75
3012 3872 0.597568 TTGCGGCCTTTTGTGATCTG 59.402 50.000 0.00 0.00 0.00 2.90
3013 3873 0.250684 TGCGGCCTTTTGTGATCTGA 60.251 50.000 0.00 0.00 0.00 3.27
3014 3874 0.881118 GCGGCCTTTTGTGATCTGAA 59.119 50.000 0.00 0.00 0.00 3.02
3015 3875 1.401539 GCGGCCTTTTGTGATCTGAAC 60.402 52.381 0.00 0.00 0.00 3.18
3016 3876 2.154462 CGGCCTTTTGTGATCTGAACT 58.846 47.619 0.00 0.00 0.00 3.01
3017 3877 2.095567 CGGCCTTTTGTGATCTGAACTG 60.096 50.000 0.00 0.00 0.00 3.16
3018 3878 2.887152 GGCCTTTTGTGATCTGAACTGT 59.113 45.455 0.00 0.00 0.00 3.55
3019 3879 4.072131 GGCCTTTTGTGATCTGAACTGTA 58.928 43.478 0.00 0.00 0.00 2.74
3020 3880 4.154918 GGCCTTTTGTGATCTGAACTGTAG 59.845 45.833 0.00 0.00 0.00 2.74
3021 3881 4.378874 GCCTTTTGTGATCTGAACTGTAGC 60.379 45.833 0.00 0.00 0.00 3.58
3022 3882 4.999950 CCTTTTGTGATCTGAACTGTAGCT 59.000 41.667 0.00 0.00 0.00 3.32
3023 3883 5.471456 CCTTTTGTGATCTGAACTGTAGCTT 59.529 40.000 0.00 0.00 0.00 3.74
3024 3884 6.650807 CCTTTTGTGATCTGAACTGTAGCTTA 59.349 38.462 0.00 0.00 0.00 3.09
3025 3885 7.173218 CCTTTTGTGATCTGAACTGTAGCTTAA 59.827 37.037 0.00 0.00 0.00 1.85
3026 3886 8.621532 TTTTGTGATCTGAACTGTAGCTTAAT 57.378 30.769 0.00 0.00 0.00 1.40
3027 3887 8.621532 TTTGTGATCTGAACTGTAGCTTAATT 57.378 30.769 0.00 0.00 0.00 1.40
3028 3888 7.834068 TGTGATCTGAACTGTAGCTTAATTC 57.166 36.000 0.00 0.00 0.00 2.17
3029 3889 6.818644 TGTGATCTGAACTGTAGCTTAATTCC 59.181 38.462 0.00 0.00 0.00 3.01
3030 3890 6.818644 GTGATCTGAACTGTAGCTTAATTCCA 59.181 38.462 0.00 0.00 0.00 3.53
3031 3891 7.497249 GTGATCTGAACTGTAGCTTAATTCCAT 59.503 37.037 0.00 0.00 0.00 3.41
3032 3892 8.049117 TGATCTGAACTGTAGCTTAATTCCATT 58.951 33.333 0.00 0.00 0.00 3.16
3033 3893 7.849804 TCTGAACTGTAGCTTAATTCCATTC 57.150 36.000 0.00 0.00 0.00 2.67
3034 3894 6.535150 TCTGAACTGTAGCTTAATTCCATTCG 59.465 38.462 0.00 0.00 0.00 3.34
3035 3895 6.403049 TGAACTGTAGCTTAATTCCATTCGA 58.597 36.000 0.00 0.00 0.00 3.71
3036 3896 6.312918 TGAACTGTAGCTTAATTCCATTCGAC 59.687 38.462 0.00 0.00 0.00 4.20
3037 3897 5.978814 ACTGTAGCTTAATTCCATTCGACT 58.021 37.500 0.00 0.00 0.00 4.18
3038 3898 6.043411 ACTGTAGCTTAATTCCATTCGACTC 58.957 40.000 0.00 0.00 0.00 3.36
3039 3899 5.357257 TGTAGCTTAATTCCATTCGACTCC 58.643 41.667 0.00 0.00 0.00 3.85
3040 3900 4.487714 AGCTTAATTCCATTCGACTCCA 57.512 40.909 0.00 0.00 0.00 3.86
3041 3901 4.446371 AGCTTAATTCCATTCGACTCCAG 58.554 43.478 0.00 0.00 0.00 3.86
3042 3902 4.080863 AGCTTAATTCCATTCGACTCCAGT 60.081 41.667 0.00 0.00 0.00 4.00
3043 3903 4.636206 GCTTAATTCCATTCGACTCCAGTT 59.364 41.667 0.00 0.00 0.00 3.16
3044 3904 5.123979 GCTTAATTCCATTCGACTCCAGTTT 59.876 40.000 0.00 0.00 0.00 2.66
3045 3905 6.315393 GCTTAATTCCATTCGACTCCAGTTTA 59.685 38.462 0.00 0.00 0.00 2.01
3046 3906 7.012421 GCTTAATTCCATTCGACTCCAGTTTAT 59.988 37.037 0.00 0.00 0.00 1.40
3047 3907 8.801882 TTAATTCCATTCGACTCCAGTTTATT 57.198 30.769 0.00 0.00 0.00 1.40
3048 3908 7.703058 AATTCCATTCGACTCCAGTTTATTT 57.297 32.000 0.00 0.00 0.00 1.40
3049 3909 8.801882 AATTCCATTCGACTCCAGTTTATTTA 57.198 30.769 0.00 0.00 0.00 1.40
3050 3910 8.980481 ATTCCATTCGACTCCAGTTTATTTAT 57.020 30.769 0.00 0.00 0.00 1.40
3051 3911 8.801882 TTCCATTCGACTCCAGTTTATTTATT 57.198 30.769 0.00 0.00 0.00 1.40
3052 3912 9.893634 TTCCATTCGACTCCAGTTTATTTATTA 57.106 29.630 0.00 0.00 0.00 0.98
3053 3913 9.321562 TCCATTCGACTCCAGTTTATTTATTAC 57.678 33.333 0.00 0.00 0.00 1.89
3054 3914 9.326413 CCATTCGACTCCAGTTTATTTATTACT 57.674 33.333 0.00 0.00 0.00 2.24
3095 3955 7.442666 TGTTTTGTAGGTTCTTTGTTTTGCTTT 59.557 29.630 0.00 0.00 0.00 3.51
3103 3963 5.659440 TCTTTGTTTTGCTTTTGAGGAGT 57.341 34.783 0.00 0.00 0.00 3.85
3105 3965 6.463360 TCTTTGTTTTGCTTTTGAGGAGTTT 58.537 32.000 0.00 0.00 0.00 2.66
3106 3966 6.368516 TCTTTGTTTTGCTTTTGAGGAGTTTG 59.631 34.615 0.00 0.00 0.00 2.93
3108 3968 5.546526 TGTTTTGCTTTTGAGGAGTTTGTT 58.453 33.333 0.00 0.00 0.00 2.83
3109 3969 5.407995 TGTTTTGCTTTTGAGGAGTTTGTTG 59.592 36.000 0.00 0.00 0.00 3.33
3110 3970 3.163630 TGCTTTTGAGGAGTTTGTTGC 57.836 42.857 0.00 0.00 0.00 4.17
3111 3971 2.495270 TGCTTTTGAGGAGTTTGTTGCA 59.505 40.909 0.00 0.00 0.00 4.08
3114 3974 4.025480 GCTTTTGAGGAGTTTGTTGCAATG 60.025 41.667 0.59 0.00 0.00 2.82
3115 3975 4.998671 TTTGAGGAGTTTGTTGCAATGA 57.001 36.364 0.59 0.00 0.00 2.57
3116 3976 4.998671 TTGAGGAGTTTGTTGCAATGAA 57.001 36.364 0.59 0.00 0.00 2.57
3117 3977 4.998671 TGAGGAGTTTGTTGCAATGAAA 57.001 36.364 0.59 2.25 0.00 2.69
3118 3978 5.336150 TGAGGAGTTTGTTGCAATGAAAA 57.664 34.783 0.59 1.49 0.00 2.29
3119 3979 5.108517 TGAGGAGTTTGTTGCAATGAAAAC 58.891 37.500 19.57 19.57 33.65 2.43
3120 3980 5.083533 AGGAGTTTGTTGCAATGAAAACA 57.916 34.783 24.81 9.55 35.46 2.83
3122 3982 6.815089 AGGAGTTTGTTGCAATGAAAACATA 58.185 32.000 24.81 5.82 36.26 2.29
3153 4044 8.696410 TCTTCTTTAATTTGGTTTGTGTTCAC 57.304 30.769 0.00 0.00 0.00 3.18
3162 4053 5.687770 TGGTTTGTGTTCACTATCATGTG 57.312 39.130 4.59 0.00 39.15 3.21
3173 4064 6.990341 TCACTATCATGTGATGAAACCTTG 57.010 37.500 5.78 0.00 43.50 3.61
3176 4067 7.665145 TCACTATCATGTGATGAAACCTTGAAA 59.335 33.333 5.78 0.00 43.50 2.69
3177 4068 7.752239 CACTATCATGTGATGAAACCTTGAAAC 59.248 37.037 5.78 0.00 43.50 2.78
3179 4070 6.462552 TCATGTGATGAAACCTTGAAACAA 57.537 33.333 0.00 0.00 36.11 2.83
3180 4071 7.053316 TCATGTGATGAAACCTTGAAACAAT 57.947 32.000 0.00 0.00 36.11 2.71
3182 4073 6.713762 TGTGATGAAACCTTGAAACAATCT 57.286 33.333 0.00 0.00 0.00 2.40
3183 4074 7.111247 TGTGATGAAACCTTGAAACAATCTT 57.889 32.000 0.00 0.00 0.00 2.40
3184 4075 8.231692 TGTGATGAAACCTTGAAACAATCTTA 57.768 30.769 0.00 0.00 0.00 2.10
3186 4077 7.809806 GTGATGAAACCTTGAAACAATCTTAGG 59.190 37.037 0.00 0.00 36.91 2.69
3187 4078 7.723616 TGATGAAACCTTGAAACAATCTTAGGA 59.276 33.333 0.00 0.00 35.66 2.94
3188 4079 7.272037 TGAAACCTTGAAACAATCTTAGGAC 57.728 36.000 0.00 0.00 35.66 3.85
3189 4080 6.831353 TGAAACCTTGAAACAATCTTAGGACA 59.169 34.615 0.00 0.00 35.66 4.02
3190 4081 6.635030 AACCTTGAAACAATCTTAGGACAC 57.365 37.500 0.00 0.00 35.66 3.67
3191 4082 5.070685 ACCTTGAAACAATCTTAGGACACC 58.929 41.667 0.00 0.00 35.66 4.16
3193 4084 5.770162 CCTTGAAACAATCTTAGGACACCTT 59.230 40.000 0.00 0.00 34.41 3.50
3194 4085 6.072452 CCTTGAAACAATCTTAGGACACCTTC 60.072 42.308 0.00 0.00 34.41 3.46
3195 4086 6.187727 TGAAACAATCTTAGGACACCTTCT 57.812 37.500 0.00 0.00 34.61 2.85
3196 4087 5.997746 TGAAACAATCTTAGGACACCTTCTG 59.002 40.000 0.00 0.00 34.61 3.02
3197 4088 5.825593 AACAATCTTAGGACACCTTCTGA 57.174 39.130 0.00 0.00 34.61 3.27
3198 4089 5.153950 ACAATCTTAGGACACCTTCTGAC 57.846 43.478 0.00 0.00 34.61 3.51
3199 4090 4.593206 ACAATCTTAGGACACCTTCTGACA 59.407 41.667 0.00 0.00 34.61 3.58
3200 4091 4.810191 ATCTTAGGACACCTTCTGACAC 57.190 45.455 0.00 0.00 34.61 3.67
3201 4092 3.572642 TCTTAGGACACCTTCTGACACA 58.427 45.455 0.00 0.00 34.61 3.72
3202 4093 3.574396 TCTTAGGACACCTTCTGACACAG 59.426 47.826 0.00 0.00 34.61 3.66
3203 4094 1.794714 AGGACACCTTCTGACACAGT 58.205 50.000 0.00 0.00 32.61 3.55
3204 4095 1.414181 AGGACACCTTCTGACACAGTG 59.586 52.381 0.00 0.00 32.61 3.66
3205 4096 1.221414 GACACCTTCTGACACAGTGC 58.779 55.000 0.00 0.00 32.61 4.40
3207 4098 1.224075 CACCTTCTGACACAGTGCTG 58.776 55.000 0.00 0.00 32.61 4.41
3208 4099 0.833287 ACCTTCTGACACAGTGCTGT 59.167 50.000 0.00 0.00 46.17 4.40
3209 4100 1.210478 ACCTTCTGACACAGTGCTGTT 59.790 47.619 0.00 0.00 42.83 3.16
3211 4102 3.071602 ACCTTCTGACACAGTGCTGTTAT 59.928 43.478 0.00 0.00 42.83 1.89
3212 4103 4.283467 ACCTTCTGACACAGTGCTGTTATA 59.717 41.667 0.00 0.00 42.83 0.98
3253 4163 9.740239 TCTTTATTTTCTGATGATGCTAAATGC 57.260 29.630 0.00 0.00 43.25 3.56
3260 4180 4.142038 TGATGATGCTAAATGCTGCTCAT 58.858 39.130 0.00 0.00 43.37 2.90
3318 4238 4.552166 TGAAGTTTAGCTGCAAGTGTTC 57.448 40.909 1.02 0.00 35.30 3.18
3319 4239 4.199310 TGAAGTTTAGCTGCAAGTGTTCT 58.801 39.130 1.02 0.00 35.30 3.01
3320 4240 4.640201 TGAAGTTTAGCTGCAAGTGTTCTT 59.360 37.500 1.02 0.00 35.30 2.52
3332 4252 5.059404 CAAGTGTTCTTGGTTTGACTTGT 57.941 39.130 0.00 0.00 45.02 3.16
3333 4253 4.701956 AGTGTTCTTGGTTTGACTTGTG 57.298 40.909 0.00 0.00 0.00 3.33
3335 4255 4.156008 AGTGTTCTTGGTTTGACTTGTGTC 59.844 41.667 0.00 0.00 43.20 3.67
3336 4256 7.688629 AAGTGTTCTTGGTTTGACTTGTGTCA 61.689 38.462 0.00 0.00 40.59 3.58
3337 4257 8.925159 AAGTGTTCTTGGTTTGACTTGTGTCAT 61.925 37.037 0.00 0.00 41.22 3.06
3346 4266 3.698029 GACTTGTGTCATTGTGTGCTT 57.302 42.857 0.00 0.00 42.48 3.91
3347 4267 3.365832 GACTTGTGTCATTGTGTGCTTG 58.634 45.455 0.00 0.00 42.48 4.01
3348 4268 2.754552 ACTTGTGTCATTGTGTGCTTGT 59.245 40.909 0.00 0.00 0.00 3.16
3349 4269 3.181497 ACTTGTGTCATTGTGTGCTTGTC 60.181 43.478 0.00 0.00 0.00 3.18
3350 4270 2.642427 TGTGTCATTGTGTGCTTGTCT 58.358 42.857 0.00 0.00 0.00 3.41
3351 4271 3.016031 TGTGTCATTGTGTGCTTGTCTT 58.984 40.909 0.00 0.00 0.00 3.01
3352 4272 3.181498 TGTGTCATTGTGTGCTTGTCTTG 60.181 43.478 0.00 0.00 0.00 3.02
3353 4273 2.358582 TGTCATTGTGTGCTTGTCTTGG 59.641 45.455 0.00 0.00 0.00 3.61
3354 4274 2.358898 GTCATTGTGTGCTTGTCTTGGT 59.641 45.455 0.00 0.00 0.00 3.67
3355 4275 3.023119 TCATTGTGTGCTTGTCTTGGTT 58.977 40.909 0.00 0.00 0.00 3.67
3356 4276 2.937469 TTGTGTGCTTGTCTTGGTTG 57.063 45.000 0.00 0.00 0.00 3.77
3357 4277 1.102154 TGTGTGCTTGTCTTGGTTGG 58.898 50.000 0.00 0.00 0.00 3.77
3358 4278 0.385390 GTGTGCTTGTCTTGGTTGGG 59.615 55.000 0.00 0.00 0.00 4.12
3359 4279 0.257328 TGTGCTTGTCTTGGTTGGGA 59.743 50.000 0.00 0.00 0.00 4.37
3360 4280 1.133513 TGTGCTTGTCTTGGTTGGGAT 60.134 47.619 0.00 0.00 0.00 3.85
3361 4281 1.541588 GTGCTTGTCTTGGTTGGGATC 59.458 52.381 0.00 0.00 0.00 3.36
3362 4282 1.177401 GCTTGTCTTGGTTGGGATCC 58.823 55.000 1.92 1.92 0.00 3.36
3365 4285 0.477597 TGTCTTGGTTGGGATCCCCT 60.478 55.000 28.58 0.00 45.70 4.79
3376 4296 1.685148 GGATCCCCTCATTTCAGTGC 58.315 55.000 0.00 0.00 0.00 4.40
3377 4297 1.213926 GGATCCCCTCATTTCAGTGCT 59.786 52.381 0.00 0.00 0.00 4.40
3379 4299 2.978156 TCCCCTCATTTCAGTGCTTT 57.022 45.000 0.00 0.00 0.00 3.51
3380 4300 2.795329 TCCCCTCATTTCAGTGCTTTC 58.205 47.619 0.00 0.00 0.00 2.62
3383 4303 4.018506 TCCCCTCATTTCAGTGCTTTCATA 60.019 41.667 0.00 0.00 0.00 2.15
3384 4304 4.096984 CCCCTCATTTCAGTGCTTTCATAC 59.903 45.833 0.00 0.00 0.00 2.39
3386 4306 5.163683 CCCTCATTTCAGTGCTTTCATACAG 60.164 44.000 0.00 0.00 0.00 2.74
3388 4308 6.245115 TCATTTCAGTGCTTTCATACAGTG 57.755 37.500 0.00 0.00 38.35 3.66
3389 4309 5.764686 TCATTTCAGTGCTTTCATACAGTGT 59.235 36.000 0.00 0.00 38.21 3.55
3392 4312 2.549329 CAGTGCTTTCATACAGTGTGCA 59.451 45.455 5.88 2.50 33.45 4.57
3395 4315 3.189080 GTGCTTTCATACAGTGTGCATGA 59.811 43.478 5.88 5.28 34.41 3.07
3397 4317 4.460034 TGCTTTCATACAGTGTGCATGATT 59.540 37.500 5.88 0.00 30.88 2.57
3398 4318 5.047872 TGCTTTCATACAGTGTGCATGATTT 60.048 36.000 5.88 0.00 30.88 2.17
3399 4319 5.865552 GCTTTCATACAGTGTGCATGATTTT 59.134 36.000 5.88 0.00 30.88 1.82
3403 4323 7.628769 TCATACAGTGTGCATGATTTTATGT 57.371 32.000 5.88 0.00 25.88 2.29
3404 4324 7.696755 TCATACAGTGTGCATGATTTTATGTC 58.303 34.615 5.88 0.00 25.88 3.06
3405 4325 4.973396 ACAGTGTGCATGATTTTATGTCG 58.027 39.130 0.00 0.00 0.00 4.35
3406 4326 4.142622 ACAGTGTGCATGATTTTATGTCGG 60.143 41.667 0.00 0.00 0.00 4.79
3408 4328 4.094887 AGTGTGCATGATTTTATGTCGGTC 59.905 41.667 0.00 0.00 0.00 4.79
3411 4331 4.096382 GTGCATGATTTTATGTCGGTCCTT 59.904 41.667 0.00 0.00 0.00 3.36
3412 4332 5.295787 GTGCATGATTTTATGTCGGTCCTTA 59.704 40.000 0.00 0.00 0.00 2.69
3413 4333 6.017109 GTGCATGATTTTATGTCGGTCCTTAT 60.017 38.462 0.00 0.00 0.00 1.73
3414 4334 6.545666 TGCATGATTTTATGTCGGTCCTTATT 59.454 34.615 0.00 0.00 0.00 1.40
3416 4336 7.920682 GCATGATTTTATGTCGGTCCTTATTTT 59.079 33.333 0.00 0.00 0.00 1.82
3417 4337 9.450807 CATGATTTTATGTCGGTCCTTATTTTC 57.549 33.333 0.00 0.00 0.00 2.29
3418 4338 8.801882 TGATTTTATGTCGGTCCTTATTTTCT 57.198 30.769 0.00 0.00 0.00 2.52
3419 4339 8.673711 TGATTTTATGTCGGTCCTTATTTTCTG 58.326 33.333 0.00 0.00 0.00 3.02
3422 4342 4.884668 TGTCGGTCCTTATTTTCTGACT 57.115 40.909 0.00 0.00 37.18 3.41
3423 4343 5.223449 TGTCGGTCCTTATTTTCTGACTT 57.777 39.130 0.00 0.00 37.18 3.01
3424 4344 5.235516 TGTCGGTCCTTATTTTCTGACTTC 58.764 41.667 0.00 0.00 37.18 3.01
3425 4345 5.221561 TGTCGGTCCTTATTTTCTGACTTCA 60.222 40.000 0.00 0.00 37.18 3.02
3426 4346 5.875359 GTCGGTCCTTATTTTCTGACTTCAT 59.125 40.000 0.00 0.00 34.54 2.57
3427 4347 6.371825 GTCGGTCCTTATTTTCTGACTTCATT 59.628 38.462 0.00 0.00 34.54 2.57
3428 4348 6.594159 TCGGTCCTTATTTTCTGACTTCATTC 59.406 38.462 0.00 0.00 0.00 2.67
3429 4349 6.595716 CGGTCCTTATTTTCTGACTTCATTCT 59.404 38.462 0.00 0.00 0.00 2.40
3430 4350 7.119846 CGGTCCTTATTTTCTGACTTCATTCTT 59.880 37.037 0.00 0.00 0.00 2.52
3444 4449 8.024865 TGACTTCATTCTTATTGTGATTTGCTG 58.975 33.333 0.00 0.00 0.00 4.41
3454 4459 1.471684 GTGATTTGCTGCTGGGAGAAG 59.528 52.381 0.00 0.00 0.00 2.85
3458 4463 3.439857 TTTGCTGCTGGGAGAAGTATT 57.560 42.857 0.00 0.00 0.00 1.89
3460 4465 1.908619 TGCTGCTGGGAGAAGTATTGA 59.091 47.619 0.00 0.00 0.00 2.57
3461 4466 2.284190 GCTGCTGGGAGAAGTATTGAC 58.716 52.381 0.00 0.00 0.00 3.18
3463 4468 3.869912 GCTGCTGGGAGAAGTATTGACAA 60.870 47.826 0.00 0.00 0.00 3.18
3465 4470 4.264253 TGCTGGGAGAAGTATTGACAATG 58.736 43.478 11.05 0.00 0.00 2.82
3466 4471 3.065925 GCTGGGAGAAGTATTGACAATGC 59.934 47.826 11.05 9.52 0.00 3.56
3516 4526 1.024271 TTCGCAGTTGCAAGAGCTTT 58.976 45.000 17.80 0.00 42.74 3.51
3603 4614 3.625853 TCCTGGTCAACATTGTGTTTCA 58.374 40.909 0.00 0.00 38.77 2.69
3604 4615 4.019858 TCCTGGTCAACATTGTGTTTCAA 58.980 39.130 0.00 0.00 38.77 2.69
3621 4632 3.909776 TCAAAATGAGCTTCAGCACTG 57.090 42.857 0.75 0.00 45.16 3.66
3622 4633 3.216800 TCAAAATGAGCTTCAGCACTGT 58.783 40.909 0.75 0.00 45.16 3.55
3677 4690 5.981315 CGCAAATGATGATAAAATCAAGGCT 59.019 36.000 0.00 0.00 43.50 4.58
3684 4697 8.125978 TGATGATAAAATCAAGGCTTGTTTCT 57.874 30.769 25.39 13.73 43.50 2.52
3685 4698 8.246180 TGATGATAAAATCAAGGCTTGTTTCTC 58.754 33.333 25.39 19.54 43.50 2.87
3686 4699 7.523293 TGATAAAATCAAGGCTTGTTTCTCA 57.477 32.000 25.39 21.43 36.11 3.27
3687 4700 7.596494 TGATAAAATCAAGGCTTGTTTCTCAG 58.404 34.615 25.39 0.00 36.11 3.35
3688 4701 7.448161 TGATAAAATCAAGGCTTGTTTCTCAGA 59.552 33.333 25.39 5.32 36.11 3.27
3689 4702 6.469782 AAAATCAAGGCTTGTTTCTCAGAA 57.530 33.333 25.39 4.58 0.00 3.02
3690 4703 5.444663 AATCAAGGCTTGTTTCTCAGAAC 57.555 39.130 25.39 0.00 0.00 3.01
3691 4704 3.884895 TCAAGGCTTGTTTCTCAGAACA 58.115 40.909 25.39 0.00 37.73 3.18
3692 4705 4.464008 TCAAGGCTTGTTTCTCAGAACAT 58.536 39.130 25.39 0.00 39.12 2.71
3693 4706 4.889409 TCAAGGCTTGTTTCTCAGAACATT 59.111 37.500 25.39 0.00 39.12 2.71
3694 4707 5.009010 TCAAGGCTTGTTTCTCAGAACATTC 59.991 40.000 25.39 0.00 39.12 2.67
3695 4708 3.499918 AGGCTTGTTTCTCAGAACATTCG 59.500 43.478 0.00 0.00 39.12 3.34
3696 4709 3.229552 GCTTGTTTCTCAGAACATTCGC 58.770 45.455 0.00 0.00 39.12 4.70
3697 4710 3.303990 GCTTGTTTCTCAGAACATTCGCA 60.304 43.478 0.00 0.00 39.12 5.10
3698 4711 4.461405 CTTGTTTCTCAGAACATTCGCAG 58.539 43.478 0.00 0.00 39.12 5.18
3699 4712 3.466836 TGTTTCTCAGAACATTCGCAGT 58.533 40.909 0.00 0.00 34.77 4.40
3700 4713 3.876914 TGTTTCTCAGAACATTCGCAGTT 59.123 39.130 0.00 0.00 34.77 3.16
3701 4714 4.214437 GTTTCTCAGAACATTCGCAGTTG 58.786 43.478 0.00 0.00 0.00 3.16
3702 4715 1.800586 TCTCAGAACATTCGCAGTTGC 59.199 47.619 0.00 0.00 37.78 4.17
3703 4716 0.874390 TCAGAACATTCGCAGTTGCC 59.126 50.000 0.00 0.00 37.91 4.52
3704 4717 0.453282 CAGAACATTCGCAGTTGCCG 60.453 55.000 0.00 0.00 37.91 5.69
3705 4718 1.797537 GAACATTCGCAGTTGCCGC 60.798 57.895 0.00 0.00 37.91 6.53
3712 4725 2.778679 GCAGTTGCCGCGTAAGAG 59.221 61.111 4.92 0.00 34.99 2.85
3713 4726 2.778679 CAGTTGCCGCGTAAGAGC 59.221 61.111 4.92 0.36 43.02 4.09
3714 4727 1.738099 CAGTTGCCGCGTAAGAGCT 60.738 57.895 4.92 0.00 38.75 4.09
3715 4728 1.004918 AGTTGCCGCGTAAGAGCTT 60.005 52.632 4.92 0.00 38.75 3.74
3716 4729 0.602905 AGTTGCCGCGTAAGAGCTTT 60.603 50.000 4.92 0.00 38.75 3.51
3717 4730 0.237498 GTTGCCGCGTAAGAGCTTTT 59.763 50.000 4.92 0.00 38.75 2.27
3718 4731 0.237235 TTGCCGCGTAAGAGCTTTTG 59.763 50.000 4.92 0.00 38.75 2.44
3719 4732 1.512098 GCCGCGTAAGAGCTTTTGC 60.512 57.895 4.92 0.00 42.16 3.68
3720 4733 1.134694 CCGCGTAAGAGCTTTTGCC 59.865 57.895 4.92 0.00 42.67 4.52
3721 4734 1.134694 CGCGTAAGAGCTTTTGCCC 59.865 57.895 0.00 0.00 42.67 5.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.462678 GGGGGAGCTGGAGTCGAC 61.463 72.222 7.70 7.70 0.00 4.20
73 74 4.089757 CGGGGAGAGGGGAAGGGA 62.090 72.222 0.00 0.00 0.00 4.20
109 110 1.946984 ATCCTCCAACTACCACGGAA 58.053 50.000 0.00 0.00 0.00 4.30
113 114 3.883489 GGCAATAATCCTCCAACTACCAC 59.117 47.826 0.00 0.00 0.00 4.16
133 134 2.202427 CGGGCAAAATTCGACGGC 60.202 61.111 0.00 0.00 0.00 5.68
137 138 1.133407 GCATAACCGGGCAAAATTCGA 59.867 47.619 6.32 0.00 0.00 3.71
154 155 1.528824 CAACCCCAGATCGGAGCAT 59.471 57.895 5.32 0.00 36.56 3.79
183 184 1.062587 CGATTGATCGGGACAACAAGC 59.937 52.381 5.51 0.00 45.93 4.01
217 218 2.513893 GAATTCGCTTGAAGCTTCAGC 58.486 47.619 27.02 27.15 39.60 4.26
218 219 2.158449 ACGAATTCGCTTGAAGCTTCAG 59.842 45.455 27.02 21.21 44.43 3.02
219 220 2.143122 ACGAATTCGCTTGAAGCTTCA 58.857 42.857 25.16 25.16 44.43 3.02
220 221 2.882742 ACGAATTCGCTTGAAGCTTC 57.117 45.000 27.03 19.89 44.43 3.86
221 222 2.673368 CCTACGAATTCGCTTGAAGCTT 59.327 45.455 27.03 0.00 44.43 3.74
222 223 2.094182 TCCTACGAATTCGCTTGAAGCT 60.094 45.455 27.03 8.10 44.43 3.74
223 224 2.268298 TCCTACGAATTCGCTTGAAGC 58.732 47.619 27.03 7.20 44.43 3.86
224 225 5.470845 AATTCCTACGAATTCGCTTGAAG 57.529 39.130 27.03 15.58 43.79 3.02
225 226 6.511121 GCATAATTCCTACGAATTCGCTTGAA 60.511 38.462 27.03 23.53 43.79 2.69
226 227 5.050363 GCATAATTCCTACGAATTCGCTTGA 60.050 40.000 27.03 17.08 43.79 3.02
227 228 5.140177 GCATAATTCCTACGAATTCGCTTG 58.860 41.667 27.03 16.32 43.79 4.01
228 229 4.084537 CGCATAATTCCTACGAATTCGCTT 60.085 41.667 27.03 11.82 43.79 4.68
229 230 3.428870 CGCATAATTCCTACGAATTCGCT 59.571 43.478 27.03 16.31 43.79 4.93
256 257 4.595781 AGGCATAACCCCTACGATTTCATA 59.404 41.667 0.00 0.00 40.58 2.15
262 263 1.802553 ACAGGCATAACCCCTACGAT 58.197 50.000 0.00 0.00 40.58 3.73
263 264 2.091720 TCTACAGGCATAACCCCTACGA 60.092 50.000 0.00 0.00 40.58 3.43
267 268 2.706190 GACATCTACAGGCATAACCCCT 59.294 50.000 0.00 0.00 40.58 4.79
285 286 2.104111 ACAGATTTGGGAGAACACGACA 59.896 45.455 0.00 0.00 0.00 4.35
294 295 2.668457 CGAAGACGAACAGATTTGGGAG 59.332 50.000 0.00 0.00 42.66 4.30
296 297 1.732259 CCGAAGACGAACAGATTTGGG 59.268 52.381 0.00 0.00 42.66 4.12
297 298 2.668457 CTCCGAAGACGAACAGATTTGG 59.332 50.000 0.00 0.00 42.66 3.28
298 299 2.092838 GCTCCGAAGACGAACAGATTTG 59.907 50.000 0.00 0.00 42.66 2.32
299 300 2.338500 GCTCCGAAGACGAACAGATTT 58.662 47.619 0.00 0.00 42.66 2.17
300 301 1.404315 GGCTCCGAAGACGAACAGATT 60.404 52.381 0.00 0.00 42.66 2.40
317 339 1.027357 GACGGCATCATGAATTGGCT 58.973 50.000 17.69 7.59 36.35 4.75
323 345 2.431782 TGAGATCAGACGGCATCATGAA 59.568 45.455 0.00 0.00 0.00 2.57
330 352 1.688197 TGCATATGAGATCAGACGGCA 59.312 47.619 6.97 2.58 31.33 5.69
338 360 7.966246 AGAGAGAAAACATGCATATGAGATC 57.034 36.000 6.97 0.00 37.73 2.75
358 380 2.419297 GGAACGGACGTCCTAGTAGAGA 60.419 54.545 30.92 0.00 0.00 3.10
360 382 1.556911 AGGAACGGACGTCCTAGTAGA 59.443 52.381 30.92 0.00 31.06 2.59
365 391 0.896940 AAGCAGGAACGGACGTCCTA 60.897 55.000 30.92 0.00 31.73 2.94
372 398 3.490933 CGAATCTATCAAGCAGGAACGGA 60.491 47.826 0.00 0.00 0.00 4.69
395 421 6.983307 ACTGGATTCGATCATGAAGACTTAAG 59.017 38.462 0.00 0.00 0.00 1.85
396 422 6.878317 ACTGGATTCGATCATGAAGACTTAA 58.122 36.000 0.00 0.00 0.00 1.85
397 423 6.471233 ACTGGATTCGATCATGAAGACTTA 57.529 37.500 0.00 0.00 0.00 2.24
408 434 5.460419 CACAAAGCTACTACTGGATTCGATC 59.540 44.000 0.00 0.00 0.00 3.69
409 435 5.105310 ACACAAAGCTACTACTGGATTCGAT 60.105 40.000 0.00 0.00 0.00 3.59
412 438 4.093556 GCACACAAAGCTACTACTGGATTC 59.906 45.833 0.00 0.00 0.00 2.52
413 439 4.003648 GCACACAAAGCTACTACTGGATT 58.996 43.478 0.00 0.00 0.00 3.01
414 440 3.600388 GCACACAAAGCTACTACTGGAT 58.400 45.455 0.00 0.00 0.00 3.41
416 442 2.076863 GGCACACAAAGCTACTACTGG 58.923 52.381 0.00 0.00 0.00 4.00
417 443 2.738846 CTGGCACACAAAGCTACTACTG 59.261 50.000 0.00 0.00 0.00 2.74
418 444 2.632996 TCTGGCACACAAAGCTACTACT 59.367 45.455 0.00 0.00 0.00 2.57
419 445 3.040147 TCTGGCACACAAAGCTACTAC 57.960 47.619 0.00 0.00 0.00 2.73
421 447 2.616510 GGATCTGGCACACAAAGCTACT 60.617 50.000 0.00 0.00 0.00 2.57
422 448 1.740025 GGATCTGGCACACAAAGCTAC 59.260 52.381 0.00 0.00 0.00 3.58
423 449 1.675714 CGGATCTGGCACACAAAGCTA 60.676 52.381 0.00 0.00 0.00 3.32
424 450 0.957395 CGGATCTGGCACACAAAGCT 60.957 55.000 0.00 0.00 0.00 3.74
425 451 1.237285 ACGGATCTGGCACACAAAGC 61.237 55.000 6.47 0.00 0.00 3.51
426 452 0.798776 GACGGATCTGGCACACAAAG 59.201 55.000 1.22 0.00 0.00 2.77
427 453 0.948623 CGACGGATCTGGCACACAAA 60.949 55.000 8.45 0.00 0.00 2.83
428 454 1.374125 CGACGGATCTGGCACACAA 60.374 57.895 8.45 0.00 0.00 3.33
429 455 2.261361 CGACGGATCTGGCACACA 59.739 61.111 8.45 0.00 0.00 3.72
430 456 3.188786 GCGACGGATCTGGCACAC 61.189 66.667 8.45 0.00 0.00 3.82
458 484 2.094854 ACGATCCTGGTACGACAAGAAC 60.095 50.000 18.00 0.00 0.00 3.01
483 509 6.290870 AGTCCTAGGCCTATAAGGAGTTTA 57.709 41.667 21.17 0.00 39.55 2.01
486 512 4.292836 CCTAGTCCTAGGCCTATAAGGAGT 59.707 50.000 26.71 26.71 45.36 3.85
487 513 4.862371 CCTAGTCCTAGGCCTATAAGGAG 58.138 52.174 21.17 10.97 45.36 3.69
499 525 8.567285 AAAACAATCAACAATCCTAGTCCTAG 57.433 34.615 0.00 0.00 0.00 3.02
500 526 7.610305 GGAAAACAATCAACAATCCTAGTCCTA 59.390 37.037 0.00 0.00 0.00 2.94
501 527 6.434340 GGAAAACAATCAACAATCCTAGTCCT 59.566 38.462 0.00 0.00 0.00 3.85
502 528 6.350194 GGGAAAACAATCAACAATCCTAGTCC 60.350 42.308 0.00 0.00 0.00 3.85
503 529 6.434340 AGGGAAAACAATCAACAATCCTAGTC 59.566 38.462 0.00 0.00 0.00 2.59
504 530 6.314917 AGGGAAAACAATCAACAATCCTAGT 58.685 36.000 0.00 0.00 0.00 2.57
521 547 1.499007 ACCTGGCTTTGAGAGGGAAAA 59.501 47.619 0.00 0.00 0.00 2.29
526 552 4.227864 AGATAAACCTGGCTTTGAGAGG 57.772 45.455 0.00 0.00 0.00 3.69
532 558 7.690256 TCTTCTAAGAAGATAAACCTGGCTTT 58.310 34.615 0.00 0.00 30.73 3.51
549 575 8.465999 AGCTGTCGGATATTATCATCTTCTAAG 58.534 37.037 6.04 0.00 0.00 2.18
552 578 6.849085 AGCTGTCGGATATTATCATCTTCT 57.151 37.500 6.04 0.00 0.00 2.85
555 581 8.801299 CCATATAGCTGTCGGATATTATCATCT 58.199 37.037 0.00 0.00 0.00 2.90
578 604 7.682028 ACAGATATCTTTTATCTAGGGCTCCAT 59.318 37.037 1.33 0.00 33.34 3.41
583 609 7.246171 TCCACAGATATCTTTTATCTAGGGC 57.754 40.000 1.33 0.00 33.34 5.19
599 627 5.241403 TGTACCACAGAAAATCCACAGAT 57.759 39.130 0.00 0.00 0.00 2.90
605 633 5.473504 ACAGAACATGTACCACAGAAAATCC 59.526 40.000 0.00 0.00 41.60 3.01
615 643 3.646162 AGGAACTGACAGAACATGTACCA 59.354 43.478 10.08 0.00 44.17 3.25
619 647 4.696479 AAGAGGAACTGACAGAACATGT 57.304 40.909 10.08 0.00 43.32 3.21
623 651 7.730364 TTGATTAAAGAGGAACTGACAGAAC 57.270 36.000 10.08 2.38 41.55 3.01
645 673 8.462016 GGGCAGCAGTATATTTTCCTTATATTG 58.538 37.037 0.00 0.00 0.00 1.90
649 677 5.952387 TGGGCAGCAGTATATTTTCCTTAT 58.048 37.500 0.00 0.00 0.00 1.73
650 678 5.381184 TGGGCAGCAGTATATTTTCCTTA 57.619 39.130 0.00 0.00 0.00 2.69
651 679 4.249638 TGGGCAGCAGTATATTTTCCTT 57.750 40.909 0.00 0.00 0.00 3.36
662 690 3.434309 AGAATAAACAATGGGCAGCAGT 58.566 40.909 0.00 0.00 0.00 4.40
673 701 6.037062 CACATCACGCCATAGAGAATAAACAA 59.963 38.462 0.00 0.00 0.00 2.83
681 709 4.729227 TTTACACATCACGCCATAGAGA 57.271 40.909 0.00 0.00 0.00 3.10
684 712 3.623060 AGCTTTTACACATCACGCCATAG 59.377 43.478 0.00 0.00 0.00 2.23
688 716 2.989422 AAGCTTTTACACATCACGCC 57.011 45.000 0.00 0.00 0.00 5.68
720 748 8.190784 GGCAAGCAAACTAACATCATAAATACT 58.809 33.333 0.00 0.00 0.00 2.12
724 752 6.208402 TGAGGCAAGCAAACTAACATCATAAA 59.792 34.615 0.00 0.00 0.00 1.40
727 755 4.081406 TGAGGCAAGCAAACTAACATCAT 58.919 39.130 0.00 0.00 0.00 2.45
729 757 4.708726 ATGAGGCAAGCAAACTAACATC 57.291 40.909 0.00 0.00 0.00 3.06
746 774 9.539825 AACTAGTAGAGAAAACATGCATATGAG 57.460 33.333 6.97 0.00 37.73 2.90
758 786 7.177041 GGAGGAAGACAGAACTAGTAGAGAAAA 59.823 40.741 3.59 0.00 0.00 2.29
770 798 4.898861 AGATATCAGGGAGGAAGACAGAAC 59.101 45.833 5.32 0.00 0.00 3.01
771 799 5.149584 AGATATCAGGGAGGAAGACAGAA 57.850 43.478 5.32 0.00 0.00 3.02
778 806 7.846823 AGAGTTTAAGAAGATATCAGGGAGGAA 59.153 37.037 5.32 0.00 0.00 3.36
812 842 9.295825 AGACACACAAAATTACTATTGGATTCA 57.704 29.630 0.00 0.00 0.00 2.57
816 846 8.458573 ACAAGACACACAAAATTACTATTGGA 57.541 30.769 0.00 0.00 0.00 3.53
872 902 2.099263 AGCAGCAGCAGCATATTTTCTG 59.901 45.455 12.92 0.00 45.49 3.02
972 1024 8.271458 TGCAGAGAATAATACCAAACAGGATAA 58.729 33.333 0.00 0.00 41.22 1.75
973 1025 7.801104 TGCAGAGAATAATACCAAACAGGATA 58.199 34.615 0.00 0.00 41.22 2.59
1026 1079 0.038744 CAAGGGTGATGGTCTTGCCT 59.961 55.000 0.00 0.00 38.35 4.75
1083 1136 2.823152 GCCCTCCTTGTCCTGGATTTTT 60.823 50.000 0.00 0.00 32.56 1.94
1086 1139 0.846427 TGCCCTCCTTGTCCTGGATT 60.846 55.000 0.00 0.00 32.56 3.01
1221 1766 1.030457 CAAAGATCTGCATGCCTCCC 58.970 55.000 16.68 2.05 0.00 4.30
1242 1787 0.397941 TCTTGCCAGTGAGGGTCTTG 59.602 55.000 0.00 0.00 38.09 3.02
1263 1808 3.323979 ACGACTCCACCTCAAGTGTAATT 59.676 43.478 0.00 0.00 45.74 1.40
1269 1814 0.962489 CAGACGACTCCACCTCAAGT 59.038 55.000 0.00 0.00 0.00 3.16
2424 2969 3.578282 TCTGGATGTTGTACTCAGCAAGA 59.422 43.478 8.94 8.94 38.21 3.02
2433 2978 3.260884 TGGACTCCTTCTGGATGTTGTAC 59.739 47.826 0.00 0.00 42.29 2.90
2457 3002 0.033504 GACGCAGGACAAGGTGAAGA 59.966 55.000 0.00 0.00 0.00 2.87
2478 3023 1.485124 AGATCTGCATACCACCACGA 58.515 50.000 0.00 0.00 0.00 4.35
2727 3498 3.570212 ACCCACCAGAGCACCCAC 61.570 66.667 0.00 0.00 0.00 4.61
2754 3525 5.545063 TGAGACTAACACTTCACATGGAA 57.455 39.130 0.00 0.00 0.00 3.53
2755 3526 5.745312 ATGAGACTAACACTTCACATGGA 57.255 39.130 0.00 0.00 0.00 3.41
2756 3527 6.205464 ACAAATGAGACTAACACTTCACATGG 59.795 38.462 0.00 0.00 0.00 3.66
2758 3529 6.767902 ACACAAATGAGACTAACACTTCACAT 59.232 34.615 0.00 0.00 0.00 3.21
2776 3548 7.624549 ACATGATAGTAGGACTTGACACAAAT 58.375 34.615 0.00 0.00 0.00 2.32
2794 3566 4.227073 TGGTCCATGAAACCAGACATGATA 59.773 41.667 13.98 0.00 44.28 2.15
2795 3567 3.010472 TGGTCCATGAAACCAGACATGAT 59.990 43.478 13.98 0.00 44.28 2.45
2796 3568 2.374839 TGGTCCATGAAACCAGACATGA 59.625 45.455 13.98 0.00 44.28 3.07
2797 3569 2.794103 TGGTCCATGAAACCAGACATG 58.206 47.619 13.98 0.00 41.84 3.21
2827 3599 2.348498 CGAAACCAACACACATCTCACG 60.348 50.000 0.00 0.00 0.00 4.35
2864 3724 5.828747 TCATACTTGACCGTACTGCTATTC 58.171 41.667 0.00 0.00 0.00 1.75
2865 3725 5.847111 TCATACTTGACCGTACTGCTATT 57.153 39.130 0.00 0.00 0.00 1.73
2895 3755 6.595716 ACACATAGGCAGATTAGTTCAAAGTC 59.404 38.462 0.00 0.00 0.00 3.01
2936 3796 8.192110 GCAACCAATTTAACCGGAAGATATTAA 58.808 33.333 9.46 0.00 0.00 1.40
2937 3797 7.201839 GGCAACCAATTTAACCGGAAGATATTA 60.202 37.037 9.46 0.00 0.00 0.98
2938 3798 6.406512 GGCAACCAATTTAACCGGAAGATATT 60.407 38.462 9.46 0.00 0.00 1.28
2939 3799 5.068591 GGCAACCAATTTAACCGGAAGATAT 59.931 40.000 9.46 0.00 0.00 1.63
2942 3802 2.559231 GGCAACCAATTTAACCGGAAGA 59.441 45.455 9.46 0.00 0.00 2.87
2952 3812 5.869649 AAACTAGAAGTGGCAACCAATTT 57.130 34.783 0.36 0.00 42.06 1.82
2984 3844 3.320826 ACAAAAGGCCGCAAAAGTAGATT 59.679 39.130 0.00 0.00 0.00 2.40
2985 3845 2.890945 ACAAAAGGCCGCAAAAGTAGAT 59.109 40.909 0.00 0.00 0.00 1.98
2986 3846 2.034053 CACAAAAGGCCGCAAAAGTAGA 59.966 45.455 0.00 0.00 0.00 2.59
2987 3847 2.034053 TCACAAAAGGCCGCAAAAGTAG 59.966 45.455 0.00 0.00 0.00 2.57
2988 3848 2.025155 TCACAAAAGGCCGCAAAAGTA 58.975 42.857 0.00 0.00 0.00 2.24
2989 3849 0.820871 TCACAAAAGGCCGCAAAAGT 59.179 45.000 0.00 0.00 0.00 2.66
2990 3850 2.061028 GATCACAAAAGGCCGCAAAAG 58.939 47.619 0.00 0.00 0.00 2.27
2991 3851 1.686052 AGATCACAAAAGGCCGCAAAA 59.314 42.857 0.00 0.00 0.00 2.44
2992 3852 1.000385 CAGATCACAAAAGGCCGCAAA 60.000 47.619 0.00 0.00 0.00 3.68
2993 3853 0.597568 CAGATCACAAAAGGCCGCAA 59.402 50.000 0.00 0.00 0.00 4.85
2994 3854 0.250684 TCAGATCACAAAAGGCCGCA 60.251 50.000 0.00 0.00 0.00 5.69
2995 3855 0.881118 TTCAGATCACAAAAGGCCGC 59.119 50.000 0.00 0.00 0.00 6.53
2996 3856 2.095567 CAGTTCAGATCACAAAAGGCCG 60.096 50.000 0.00 0.00 0.00 6.13
2997 3857 2.887152 ACAGTTCAGATCACAAAAGGCC 59.113 45.455 0.00 0.00 0.00 5.19
2998 3858 4.378874 GCTACAGTTCAGATCACAAAAGGC 60.379 45.833 0.00 0.00 0.00 4.35
2999 3859 4.999950 AGCTACAGTTCAGATCACAAAAGG 59.000 41.667 0.00 0.00 0.00 3.11
3000 3860 6.551385 AAGCTACAGTTCAGATCACAAAAG 57.449 37.500 0.00 0.00 0.00 2.27
3001 3861 8.621532 ATTAAGCTACAGTTCAGATCACAAAA 57.378 30.769 0.00 0.00 0.00 2.44
3002 3862 8.621532 AATTAAGCTACAGTTCAGATCACAAA 57.378 30.769 0.00 0.00 0.00 2.83
3003 3863 7.334421 GGAATTAAGCTACAGTTCAGATCACAA 59.666 37.037 0.00 0.00 0.00 3.33
3004 3864 6.818644 GGAATTAAGCTACAGTTCAGATCACA 59.181 38.462 0.00 0.00 0.00 3.58
3005 3865 6.818644 TGGAATTAAGCTACAGTTCAGATCAC 59.181 38.462 0.00 0.00 0.00 3.06
3006 3866 6.946340 TGGAATTAAGCTACAGTTCAGATCA 58.054 36.000 0.00 0.00 0.00 2.92
3007 3867 8.443953 AATGGAATTAAGCTACAGTTCAGATC 57.556 34.615 0.00 0.00 32.46 2.75
3008 3868 7.225538 CGAATGGAATTAAGCTACAGTTCAGAT 59.774 37.037 0.00 0.00 36.07 2.90
3009 3869 6.535150 CGAATGGAATTAAGCTACAGTTCAGA 59.465 38.462 0.00 0.00 36.07 3.27
3010 3870 6.535150 TCGAATGGAATTAAGCTACAGTTCAG 59.465 38.462 0.00 0.00 36.07 3.02
3011 3871 6.312918 GTCGAATGGAATTAAGCTACAGTTCA 59.687 38.462 0.00 0.00 36.07 3.18
3012 3872 6.535508 AGTCGAATGGAATTAAGCTACAGTTC 59.464 38.462 0.00 0.00 36.07 3.01
3013 3873 6.407202 AGTCGAATGGAATTAAGCTACAGTT 58.593 36.000 0.00 0.00 36.07 3.16
3014 3874 5.978814 AGTCGAATGGAATTAAGCTACAGT 58.021 37.500 0.00 0.00 36.07 3.55
3015 3875 5.463724 GGAGTCGAATGGAATTAAGCTACAG 59.536 44.000 0.00 0.00 36.07 2.74
3016 3876 5.105106 TGGAGTCGAATGGAATTAAGCTACA 60.105 40.000 0.00 0.00 36.07 2.74
3017 3877 5.357257 TGGAGTCGAATGGAATTAAGCTAC 58.643 41.667 0.00 0.00 36.07 3.58
3018 3878 5.128827 ACTGGAGTCGAATGGAATTAAGCTA 59.871 40.000 0.00 0.00 36.07 3.32
3019 3879 4.080863 ACTGGAGTCGAATGGAATTAAGCT 60.081 41.667 0.00 0.00 36.07 3.74
3020 3880 4.192317 ACTGGAGTCGAATGGAATTAAGC 58.808 43.478 0.00 0.00 36.07 3.09
3021 3881 6.743575 AAACTGGAGTCGAATGGAATTAAG 57.256 37.500 0.00 0.00 36.07 1.85
3022 3882 8.801882 AATAAACTGGAGTCGAATGGAATTAA 57.198 30.769 0.00 0.00 36.07 1.40
3023 3883 8.801882 AAATAAACTGGAGTCGAATGGAATTA 57.198 30.769 0.00 0.00 36.07 1.40
3024 3884 7.703058 AAATAAACTGGAGTCGAATGGAATT 57.297 32.000 0.00 0.00 40.93 2.17
3025 3885 8.980481 ATAAATAAACTGGAGTCGAATGGAAT 57.020 30.769 0.00 0.00 0.00 3.01
3026 3886 8.801882 AATAAATAAACTGGAGTCGAATGGAA 57.198 30.769 0.00 0.00 0.00 3.53
3027 3887 9.321562 GTAATAAATAAACTGGAGTCGAATGGA 57.678 33.333 0.00 0.00 0.00 3.41
3028 3888 9.326413 AGTAATAAATAAACTGGAGTCGAATGG 57.674 33.333 0.00 0.00 0.00 3.16
3057 3917 9.802039 AGAACCTACAAAACATATTAGAACCAA 57.198 29.630 0.00 0.00 0.00 3.67
3058 3918 9.802039 AAGAACCTACAAAACATATTAGAACCA 57.198 29.630 0.00 0.00 0.00 3.67
3066 3926 9.040939 GCAAAACAAAGAACCTACAAAACATAT 57.959 29.630 0.00 0.00 0.00 1.78
3067 3927 8.254508 AGCAAAACAAAGAACCTACAAAACATA 58.745 29.630 0.00 0.00 0.00 2.29
3068 3928 7.102993 AGCAAAACAAAGAACCTACAAAACAT 58.897 30.769 0.00 0.00 0.00 2.71
3069 3929 6.459923 AGCAAAACAAAGAACCTACAAAACA 58.540 32.000 0.00 0.00 0.00 2.83
3070 3930 6.961359 AGCAAAACAAAGAACCTACAAAAC 57.039 33.333 0.00 0.00 0.00 2.43
3071 3931 7.971183 AAAGCAAAACAAAGAACCTACAAAA 57.029 28.000 0.00 0.00 0.00 2.44
3072 3932 7.657761 TCAAAAGCAAAACAAAGAACCTACAAA 59.342 29.630 0.00 0.00 0.00 2.83
3073 3933 7.155328 TCAAAAGCAAAACAAAGAACCTACAA 58.845 30.769 0.00 0.00 0.00 2.41
3074 3934 6.692486 TCAAAAGCAAAACAAAGAACCTACA 58.308 32.000 0.00 0.00 0.00 2.74
3075 3935 6.255670 CCTCAAAAGCAAAACAAAGAACCTAC 59.744 38.462 0.00 0.00 0.00 3.18
3076 3936 6.153680 TCCTCAAAAGCAAAACAAAGAACCTA 59.846 34.615 0.00 0.00 0.00 3.08
3077 3937 5.046663 TCCTCAAAAGCAAAACAAAGAACCT 60.047 36.000 0.00 0.00 0.00 3.50
3078 3938 5.175127 TCCTCAAAAGCAAAACAAAGAACC 58.825 37.500 0.00 0.00 0.00 3.62
3079 3939 5.869344 ACTCCTCAAAAGCAAAACAAAGAAC 59.131 36.000 0.00 0.00 0.00 3.01
3080 3940 6.036577 ACTCCTCAAAAGCAAAACAAAGAA 57.963 33.333 0.00 0.00 0.00 2.52
3095 3955 4.998671 TTCATTGCAACAAACTCCTCAA 57.001 36.364 0.00 0.00 0.00 3.02
3132 4020 9.743057 TGATAGTGAACACAAACCAAATTAAAG 57.257 29.630 7.68 0.00 0.00 1.85
3141 4029 5.940192 TCACATGATAGTGAACACAAACC 57.060 39.130 0.00 0.00 44.92 3.27
3153 4044 7.819644 TGTTTCAAGGTTTCATCACATGATAG 58.180 34.615 0.00 0.00 39.39 2.08
3159 4050 6.713762 AGATTGTTTCAAGGTTTCATCACA 57.286 33.333 0.00 0.00 0.00 3.58
3162 4053 8.023706 GTCCTAAGATTGTTTCAAGGTTTCATC 58.976 37.037 0.00 0.00 33.54 2.92
3173 4064 6.147985 GTCAGAAGGTGTCCTAAGATTGTTTC 59.852 42.308 0.00 0.00 31.13 2.78
3176 4067 4.593206 TGTCAGAAGGTGTCCTAAGATTGT 59.407 41.667 0.00 0.00 31.13 2.71
3177 4068 4.932200 GTGTCAGAAGGTGTCCTAAGATTG 59.068 45.833 0.00 0.00 31.13 2.67
3179 4070 4.160329 TGTGTCAGAAGGTGTCCTAAGAT 58.840 43.478 0.00 0.00 31.13 2.40
3180 4071 3.572642 TGTGTCAGAAGGTGTCCTAAGA 58.427 45.455 0.00 0.00 31.13 2.10
3182 4073 3.069586 CACTGTGTCAGAAGGTGTCCTAA 59.930 47.826 0.00 0.00 35.18 2.69
3183 4074 2.628178 CACTGTGTCAGAAGGTGTCCTA 59.372 50.000 0.00 0.00 35.18 2.94
3184 4075 1.414181 CACTGTGTCAGAAGGTGTCCT 59.586 52.381 0.00 0.00 35.18 3.85
3186 4077 1.202580 AGCACTGTGTCAGAAGGTGTC 60.203 52.381 9.86 0.00 35.18 3.67
3187 4078 0.833287 AGCACTGTGTCAGAAGGTGT 59.167 50.000 9.86 0.00 35.18 4.16
3188 4079 1.224075 CAGCACTGTGTCAGAAGGTG 58.776 55.000 9.86 7.50 35.18 4.00
3189 4080 0.833287 ACAGCACTGTGTCAGAAGGT 59.167 50.000 9.86 0.00 43.11 3.50
3190 4081 1.959042 AACAGCACTGTGTCAGAAGG 58.041 50.000 9.86 0.00 44.13 3.46
3191 4082 5.347093 CAGTATAACAGCACTGTGTCAGAAG 59.653 44.000 9.86 0.00 44.13 2.85
3193 4084 4.809673 CAGTATAACAGCACTGTGTCAGA 58.190 43.478 9.86 0.00 44.13 3.27
3200 4091 6.101997 TCTCATTCACAGTATAACAGCACTG 58.898 40.000 0.00 0.00 46.15 3.66
3201 4092 6.286240 TCTCATTCACAGTATAACAGCACT 57.714 37.500 0.00 0.00 0.00 4.40
3202 4093 6.591834 ACTTCTCATTCACAGTATAACAGCAC 59.408 38.462 0.00 0.00 0.00 4.40
3203 4094 6.701340 ACTTCTCATTCACAGTATAACAGCA 58.299 36.000 0.00 0.00 0.00 4.41
3204 4095 7.038659 AGACTTCTCATTCACAGTATAACAGC 58.961 38.462 0.00 0.00 0.00 4.40
3205 4096 8.994429 AAGACTTCTCATTCACAGTATAACAG 57.006 34.615 0.00 0.00 0.00 3.16
3212 4103 9.566432 AGAAAATAAAGACTTCTCATTCACAGT 57.434 29.630 0.00 0.00 0.00 3.55
3260 4180 2.601664 GGGGGCCAACAATATGCAA 58.398 52.632 4.39 0.00 0.00 4.08
3326 4246 3.181497 ACAAGCACACAATGACACAAGTC 60.181 43.478 0.00 0.00 45.19 3.01
3327 4247 2.754552 ACAAGCACACAATGACACAAGT 59.245 40.909 0.00 0.00 0.00 3.16
3328 4248 3.065786 AGACAAGCACACAATGACACAAG 59.934 43.478 0.00 0.00 0.00 3.16
3332 4252 2.358582 CCAAGACAAGCACACAATGACA 59.641 45.455 0.00 0.00 0.00 3.58
3333 4253 2.358898 ACCAAGACAAGCACACAATGAC 59.641 45.455 0.00 0.00 0.00 3.06
3335 4255 3.117794 CAACCAAGACAAGCACACAATG 58.882 45.455 0.00 0.00 0.00 2.82
3336 4256 2.101249 CCAACCAAGACAAGCACACAAT 59.899 45.455 0.00 0.00 0.00 2.71
3337 4257 1.476085 CCAACCAAGACAAGCACACAA 59.524 47.619 0.00 0.00 0.00 3.33
3338 4258 1.102154 CCAACCAAGACAAGCACACA 58.898 50.000 0.00 0.00 0.00 3.72
3339 4259 0.385390 CCCAACCAAGACAAGCACAC 59.615 55.000 0.00 0.00 0.00 3.82
3340 4260 0.257328 TCCCAACCAAGACAAGCACA 59.743 50.000 0.00 0.00 0.00 4.57
3341 4261 1.541588 GATCCCAACCAAGACAAGCAC 59.458 52.381 0.00 0.00 0.00 4.40
3342 4262 1.547675 GGATCCCAACCAAGACAAGCA 60.548 52.381 0.00 0.00 0.00 3.91
3343 4263 1.177401 GGATCCCAACCAAGACAAGC 58.823 55.000 0.00 0.00 0.00 4.01
3344 4264 1.616994 GGGGATCCCAACCAAGACAAG 60.617 57.143 32.07 0.00 44.65 3.16
3345 4265 0.407918 GGGGATCCCAACCAAGACAA 59.592 55.000 32.07 0.00 44.65 3.18
3346 4266 2.083715 GGGGATCCCAACCAAGACA 58.916 57.895 32.07 0.00 44.65 3.41
3356 4276 1.752084 GCACTGAAATGAGGGGATCCC 60.752 57.143 23.95 23.95 45.90 3.85
3357 4277 1.213926 AGCACTGAAATGAGGGGATCC 59.786 52.381 1.92 1.92 0.00 3.36
3358 4278 2.725221 AGCACTGAAATGAGGGGATC 57.275 50.000 0.00 0.00 0.00 3.36
3359 4279 3.245371 TGAAAGCACTGAAATGAGGGGAT 60.245 43.478 0.00 0.00 0.00 3.85
3360 4280 2.108075 TGAAAGCACTGAAATGAGGGGA 59.892 45.455 0.00 0.00 0.00 4.81
3361 4281 2.517959 TGAAAGCACTGAAATGAGGGG 58.482 47.619 0.00 0.00 0.00 4.79
3362 4282 4.701651 TGTATGAAAGCACTGAAATGAGGG 59.298 41.667 0.00 0.00 0.00 4.30
3365 4285 5.764686 ACACTGTATGAAAGCACTGAAATGA 59.235 36.000 0.00 0.00 0.00 2.57
3380 4300 6.630045 CGACATAAAATCATGCACACTGTATG 59.370 38.462 0.00 0.00 41.03 2.39
3383 4303 4.142622 CCGACATAAAATCATGCACACTGT 60.143 41.667 0.00 0.00 0.00 3.55
3384 4304 4.142622 ACCGACATAAAATCATGCACACTG 60.143 41.667 0.00 0.00 0.00 3.66
3386 4306 4.342772 GACCGACATAAAATCATGCACAC 58.657 43.478 0.00 0.00 0.00 3.82
3388 4308 3.627577 AGGACCGACATAAAATCATGCAC 59.372 43.478 0.00 0.00 0.00 4.57
3389 4309 3.884895 AGGACCGACATAAAATCATGCA 58.115 40.909 0.00 0.00 0.00 3.96
3392 4312 9.408648 AGAAAATAAGGACCGACATAAAATCAT 57.591 29.630 0.00 0.00 0.00 2.45
3395 4315 8.674607 GTCAGAAAATAAGGACCGACATAAAAT 58.325 33.333 0.00 0.00 0.00 1.82
3397 4317 7.391620 AGTCAGAAAATAAGGACCGACATAAA 58.608 34.615 0.00 0.00 0.00 1.40
3398 4318 6.942976 AGTCAGAAAATAAGGACCGACATAA 58.057 36.000 0.00 0.00 0.00 1.90
3399 4319 6.540438 AGTCAGAAAATAAGGACCGACATA 57.460 37.500 0.00 0.00 0.00 2.29
3403 4323 5.477607 TGAAGTCAGAAAATAAGGACCGA 57.522 39.130 0.00 0.00 0.00 4.69
3404 4324 6.595716 AGAATGAAGTCAGAAAATAAGGACCG 59.404 38.462 0.00 0.00 0.00 4.79
3405 4325 7.929941 AGAATGAAGTCAGAAAATAAGGACC 57.070 36.000 0.00 0.00 0.00 4.46
3416 4336 8.239314 GCAAATCACAATAAGAATGAAGTCAGA 58.761 33.333 0.00 0.00 0.00 3.27
3417 4337 8.242053 AGCAAATCACAATAAGAATGAAGTCAG 58.758 33.333 0.00 0.00 0.00 3.51
3418 4338 8.024865 CAGCAAATCACAATAAGAATGAAGTCA 58.975 33.333 0.00 0.00 0.00 3.41
3419 4339 7.008992 GCAGCAAATCACAATAAGAATGAAGTC 59.991 37.037 0.00 0.00 0.00 3.01
3422 4342 6.809689 CAGCAGCAAATCACAATAAGAATGAA 59.190 34.615 0.00 0.00 0.00 2.57
3423 4343 6.327154 CAGCAGCAAATCACAATAAGAATGA 58.673 36.000 0.00 0.00 0.00 2.57
3424 4344 5.518847 CCAGCAGCAAATCACAATAAGAATG 59.481 40.000 0.00 0.00 0.00 2.67
3425 4345 5.394883 CCCAGCAGCAAATCACAATAAGAAT 60.395 40.000 0.00 0.00 0.00 2.40
3426 4346 4.082081 CCCAGCAGCAAATCACAATAAGAA 60.082 41.667 0.00 0.00 0.00 2.52
3427 4347 3.444742 CCCAGCAGCAAATCACAATAAGA 59.555 43.478 0.00 0.00 0.00 2.10
3428 4348 3.444742 TCCCAGCAGCAAATCACAATAAG 59.555 43.478 0.00 0.00 0.00 1.73
3429 4349 3.429492 TCCCAGCAGCAAATCACAATAA 58.571 40.909 0.00 0.00 0.00 1.40
3430 4350 3.018856 CTCCCAGCAGCAAATCACAATA 58.981 45.455 0.00 0.00 0.00 1.90
3444 4449 3.065925 GCATTGTCAATACTTCTCCCAGC 59.934 47.826 0.00 0.00 0.00 4.85
3454 4459 9.023967 CCTTAAATTTAGCAGCATTGTCAATAC 57.976 33.333 0.00 0.00 0.00 1.89
3458 4463 5.185635 AGCCTTAAATTTAGCAGCATTGTCA 59.814 36.000 14.71 0.00 0.00 3.58
3460 4465 5.665916 AGCCTTAAATTTAGCAGCATTGT 57.334 34.783 14.71 0.00 0.00 2.71
3461 4466 5.870978 ACAAGCCTTAAATTTAGCAGCATTG 59.129 36.000 14.71 15.52 0.00 2.82
3463 4468 5.665916 ACAAGCCTTAAATTTAGCAGCAT 57.334 34.783 14.71 4.40 0.00 3.79
3465 4470 6.159293 AGAAACAAGCCTTAAATTTAGCAGC 58.841 36.000 10.91 9.24 0.00 5.25
3466 4471 7.370383 TGAGAAACAAGCCTTAAATTTAGCAG 58.630 34.615 10.91 2.00 0.00 4.24
3537 4547 5.241064 CCAAGGAAGGAATTATCAGCATCAG 59.759 44.000 0.00 0.00 0.00 2.90
3540 4550 5.393068 TCCAAGGAAGGAATTATCAGCAT 57.607 39.130 0.00 0.00 33.93 3.79
3541 4551 4.860802 TCCAAGGAAGGAATTATCAGCA 57.139 40.909 0.00 0.00 33.93 4.41
3542 4552 5.136105 ACATCCAAGGAAGGAATTATCAGC 58.864 41.667 0.00 0.00 41.92 4.26
3543 4553 6.485984 CAGACATCCAAGGAAGGAATTATCAG 59.514 42.308 0.00 0.00 41.92 2.90
3544 4554 6.158520 TCAGACATCCAAGGAAGGAATTATCA 59.841 38.462 0.00 0.00 41.92 2.15
3545 4555 6.595682 TCAGACATCCAAGGAAGGAATTATC 58.404 40.000 0.00 0.00 41.92 1.75
3546 4556 6.581388 TCAGACATCCAAGGAAGGAATTAT 57.419 37.500 0.00 0.00 41.92 1.28
3547 4557 5.630069 GCTCAGACATCCAAGGAAGGAATTA 60.630 44.000 0.00 0.00 41.92 1.40
3548 4558 4.853007 CTCAGACATCCAAGGAAGGAATT 58.147 43.478 0.00 0.00 41.92 2.17
3603 4614 5.067674 TGTTTACAGTGCTGAAGCTCATTTT 59.932 36.000 6.17 0.00 42.66 1.82
3604 4615 4.580167 TGTTTACAGTGCTGAAGCTCATTT 59.420 37.500 6.17 0.00 42.66 2.32
3645 4657 1.026584 TCATCATTTGCGATGCAGGG 58.973 50.000 0.00 0.00 42.15 4.45
3677 4690 3.876914 ACTGCGAATGTTCTGAGAAACAA 59.123 39.130 0.00 0.00 42.10 2.83
3684 4697 0.874390 GGCAACTGCGAATGTTCTGA 59.126 50.000 0.00 0.00 43.26 3.27
3685 4698 0.453282 CGGCAACTGCGAATGTTCTG 60.453 55.000 0.00 0.00 43.26 3.02
3686 4699 1.868997 CGGCAACTGCGAATGTTCT 59.131 52.632 0.00 0.00 43.26 3.01
3687 4700 1.797537 GCGGCAACTGCGAATGTTC 60.798 57.895 0.00 0.00 43.26 3.18
3688 4701 2.255252 GCGGCAACTGCGAATGTT 59.745 55.556 0.00 0.00 43.26 2.71
3695 4708 2.778679 CTCTTACGCGGCAACTGC 59.221 61.111 12.47 0.00 41.14 4.40
3696 4709 1.291877 AAGCTCTTACGCGGCAACTG 61.292 55.000 12.47 0.00 34.40 3.16
3697 4710 0.602905 AAAGCTCTTACGCGGCAACT 60.603 50.000 12.47 0.00 34.40 3.16
3698 4711 0.237498 AAAAGCTCTTACGCGGCAAC 59.763 50.000 12.47 0.00 34.40 4.17
3699 4712 0.237235 CAAAAGCTCTTACGCGGCAA 59.763 50.000 12.47 2.71 34.40 4.52
3700 4713 1.866237 CAAAAGCTCTTACGCGGCA 59.134 52.632 12.47 0.00 34.40 5.69
3701 4714 1.512098 GCAAAAGCTCTTACGCGGC 60.512 57.895 12.47 3.04 34.40 6.53
3702 4715 1.134694 GGCAAAAGCTCTTACGCGG 59.865 57.895 12.47 0.00 34.40 6.46
3703 4716 1.134694 GGGCAAAAGCTCTTACGCG 59.865 57.895 3.53 3.53 34.40 6.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.