Multiple sequence alignment - TraesCS6A01G112000
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6A01G112000 | chr6A | 100.000 | 3284 | 0 | 0 | 1 | 3284 | 81110874 | 81107591 | 0.000000e+00 | 6065 |
1 | TraesCS6A01G112000 | chr6A | 87.575 | 837 | 74 | 16 | 2420 | 3241 | 532800647 | 532799826 | 0.000000e+00 | 942 |
2 | TraesCS6A01G112000 | chr6A | 92.076 | 631 | 48 | 2 | 2420 | 3050 | 435541227 | 435541855 | 0.000000e+00 | 887 |
3 | TraesCS6A01G112000 | chr6A | 94.022 | 552 | 33 | 0 | 2420 | 2971 | 81103259 | 81102708 | 0.000000e+00 | 837 |
4 | TraesCS6A01G112000 | chr6A | 94.150 | 547 | 31 | 1 | 2420 | 2966 | 435547639 | 435548184 | 0.000000e+00 | 832 |
5 | TraesCS6A01G112000 | chr6A | 92.391 | 552 | 40 | 1 | 2420 | 2971 | 532795443 | 532794894 | 0.000000e+00 | 785 |
6 | TraesCS6A01G112000 | chr6A | 88.968 | 281 | 31 | 0 | 1683 | 1963 | 80884817 | 80884537 | 6.740000e-92 | 348 |
7 | TraesCS6A01G112000 | chr6A | 85.263 | 285 | 33 | 5 | 2132 | 2415 | 80884426 | 80884150 | 5.360000e-73 | 285 |
8 | TraesCS6A01G112000 | chr6A | 88.587 | 184 | 19 | 1 | 1379 | 1560 | 80884994 | 80884811 | 4.270000e-54 | 222 |
9 | TraesCS6A01G112000 | chr6A | 85.027 | 187 | 19 | 3 | 911 | 1097 | 80886805 | 80886628 | 7.240000e-42 | 182 |
10 | TraesCS6A01G112000 | chr6D | 92.582 | 1092 | 46 | 16 | 1341 | 2419 | 63762480 | 63761411 | 0.000000e+00 | 1535 |
11 | TraesCS6A01G112000 | chr6D | 89.708 | 583 | 43 | 10 | 704 | 1278 | 63763173 | 63762600 | 0.000000e+00 | 728 |
12 | TraesCS6A01G112000 | chr6D | 89.953 | 428 | 31 | 8 | 1683 | 2099 | 63733748 | 63733322 | 2.880000e-150 | 542 |
13 | TraesCS6A01G112000 | chr6D | 84.859 | 284 | 31 | 6 | 2135 | 2415 | 63733319 | 63733045 | 3.230000e-70 | 276 |
14 | TraesCS6A01G112000 | chr6D | 88.596 | 228 | 24 | 1 | 1383 | 1608 | 63734013 | 63733786 | 3.230000e-70 | 276 |
15 | TraesCS6A01G112000 | chr6D | 81.424 | 323 | 24 | 16 | 1 | 299 | 63763531 | 63763221 | 7.090000e-57 | 231 |
16 | TraesCS6A01G112000 | chr6D | 87.255 | 102 | 8 | 4 | 61 | 161 | 63734340 | 63734243 | 9.630000e-21 | 111 |
17 | TraesCS6A01G112000 | chr7A | 90.476 | 798 | 50 | 15 | 2420 | 3201 | 33869349 | 33870136 | 0.000000e+00 | 1029 |
18 | TraesCS6A01G112000 | chr4A | 92.880 | 632 | 43 | 2 | 2419 | 3050 | 29783856 | 29784485 | 0.000000e+00 | 917 |
19 | TraesCS6A01G112000 | chr4A | 94.043 | 554 | 32 | 1 | 2420 | 2973 | 29789057 | 29789609 | 0.000000e+00 | 839 |
20 | TraesCS6A01G112000 | chr5D | 93.659 | 552 | 34 | 1 | 2420 | 2971 | 423009991 | 423009441 | 0.000000e+00 | 824 |
21 | TraesCS6A01G112000 | chr6B | 85.040 | 742 | 78 | 16 | 1375 | 2099 | 137422144 | 137421419 | 0.000000e+00 | 725 |
22 | TraesCS6A01G112000 | chr6B | 85.271 | 258 | 25 | 7 | 2132 | 2386 | 137421419 | 137421172 | 1.510000e-63 | 254 |
23 | TraesCS6A01G112000 | chr6B | 83.333 | 204 | 19 | 8 | 59 | 259 | 137422837 | 137422646 | 1.210000e-39 | 174 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6A01G112000 | chr6A | 81107591 | 81110874 | 3283 | True | 6065.000000 | 6065 | 100.000000 | 1 | 3284 | 1 | chr6A.!!$R2 | 3283 |
1 | TraesCS6A01G112000 | chr6A | 532799826 | 532800647 | 821 | True | 942.000000 | 942 | 87.575000 | 2420 | 3241 | 1 | chr6A.!!$R4 | 821 |
2 | TraesCS6A01G112000 | chr6A | 435541227 | 435541855 | 628 | False | 887.000000 | 887 | 92.076000 | 2420 | 3050 | 1 | chr6A.!!$F1 | 630 |
3 | TraesCS6A01G112000 | chr6A | 81102708 | 81103259 | 551 | True | 837.000000 | 837 | 94.022000 | 2420 | 2971 | 1 | chr6A.!!$R1 | 551 |
4 | TraesCS6A01G112000 | chr6A | 435547639 | 435548184 | 545 | False | 832.000000 | 832 | 94.150000 | 2420 | 2966 | 1 | chr6A.!!$F2 | 546 |
5 | TraesCS6A01G112000 | chr6A | 532794894 | 532795443 | 549 | True | 785.000000 | 785 | 92.391000 | 2420 | 2971 | 1 | chr6A.!!$R3 | 551 |
6 | TraesCS6A01G112000 | chr6A | 80884150 | 80886805 | 2655 | True | 259.250000 | 348 | 86.961250 | 911 | 2415 | 4 | chr6A.!!$R5 | 1504 |
7 | TraesCS6A01G112000 | chr6D | 63761411 | 63763531 | 2120 | True | 831.333333 | 1535 | 87.904667 | 1 | 2419 | 3 | chr6D.!!$R2 | 2418 |
8 | TraesCS6A01G112000 | chr6D | 63733045 | 63734340 | 1295 | True | 301.250000 | 542 | 87.665750 | 61 | 2415 | 4 | chr6D.!!$R1 | 2354 |
9 | TraesCS6A01G112000 | chr7A | 33869349 | 33870136 | 787 | False | 1029.000000 | 1029 | 90.476000 | 2420 | 3201 | 1 | chr7A.!!$F1 | 781 |
10 | TraesCS6A01G112000 | chr4A | 29783856 | 29784485 | 629 | False | 917.000000 | 917 | 92.880000 | 2419 | 3050 | 1 | chr4A.!!$F1 | 631 |
11 | TraesCS6A01G112000 | chr4A | 29789057 | 29789609 | 552 | False | 839.000000 | 839 | 94.043000 | 2420 | 2973 | 1 | chr4A.!!$F2 | 553 |
12 | TraesCS6A01G112000 | chr5D | 423009441 | 423009991 | 550 | True | 824.000000 | 824 | 93.659000 | 2420 | 2971 | 1 | chr5D.!!$R1 | 551 |
13 | TraesCS6A01G112000 | chr6B | 137421172 | 137422837 | 1665 | True | 384.333333 | 725 | 84.548000 | 59 | 2386 | 3 | chr6B.!!$R1 | 2327 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
711 | 746 | 0.112412 | AGTGAAACCCCGCTTTGGAT | 59.888 | 50.0 | 0.0 | 0.0 | 37.52 | 3.41 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2359 | 3975 | 0.591488 | CGCGCGTGATCAAGCTAGTA | 60.591 | 55.0 | 27.21 | 0.0 | 33.62 | 1.82 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
84 | 114 | 4.742201 | CGCCCGTGGTCAGGTCAG | 62.742 | 72.222 | 0.00 | 0.00 | 0.00 | 3.51 |
85 | 115 | 4.394712 | GCCCGTGGTCAGGTCAGG | 62.395 | 72.222 | 0.00 | 0.00 | 0.00 | 3.86 |
86 | 116 | 2.923035 | CCCGTGGTCAGGTCAGGT | 60.923 | 66.667 | 0.00 | 0.00 | 0.00 | 4.00 |
127 | 157 | 0.179034 | AGCCATCGCTCCTCCATTTC | 60.179 | 55.000 | 0.00 | 0.00 | 43.95 | 2.17 |
128 | 158 | 1.169034 | GCCATCGCTCCTCCATTTCC | 61.169 | 60.000 | 0.00 | 0.00 | 0.00 | 3.13 |
129 | 159 | 0.536006 | CCATCGCTCCTCCATTTCCC | 60.536 | 60.000 | 0.00 | 0.00 | 0.00 | 3.97 |
144 | 174 | 3.489513 | CCCCTCGGTCCATTCCCC | 61.490 | 72.222 | 0.00 | 0.00 | 0.00 | 4.81 |
150 | 180 | 2.025699 | CCTCGGTCCATTCCCCTTTTTA | 60.026 | 50.000 | 0.00 | 0.00 | 0.00 | 1.52 |
161 | 191 | 1.381076 | CCTTTTTAGGTGGCGGGGA | 59.619 | 57.895 | 0.00 | 0.00 | 0.00 | 4.81 |
226 | 258 | 2.911143 | CCCCGGATCCTCAGGTTG | 59.089 | 66.667 | 10.75 | 0.00 | 29.18 | 3.77 |
235 | 267 | 3.198853 | GGATCCTCAGGTTGAGCTAAACT | 59.801 | 47.826 | 13.82 | 1.04 | 42.98 | 2.66 |
270 | 302 | 3.535280 | TGATGTAGCAAGGCAACGATA | 57.465 | 42.857 | 0.00 | 0.00 | 46.39 | 2.92 |
272 | 304 | 3.809279 | TGATGTAGCAAGGCAACGATATG | 59.191 | 43.478 | 0.00 | 0.00 | 46.39 | 1.78 |
274 | 306 | 1.873591 | GTAGCAAGGCAACGATATGGG | 59.126 | 52.381 | 0.00 | 0.00 | 46.39 | 4.00 |
279 | 311 | 0.179056 | AGGCAACGATATGGGGTTCG | 60.179 | 55.000 | 0.00 | 0.00 | 46.39 | 3.95 |
296 | 328 | 0.397394 | TCGTTGGGGGTATGATCCGA | 60.397 | 55.000 | 0.00 | 0.00 | 0.00 | 4.55 |
299 | 331 | 2.353406 | CGTTGGGGGTATGATCCGATAC | 60.353 | 54.545 | 0.00 | 0.00 | 0.00 | 2.24 |
300 | 332 | 2.635915 | GTTGGGGGTATGATCCGATACA | 59.364 | 50.000 | 5.76 | 0.00 | 31.38 | 2.29 |
301 | 333 | 2.536066 | TGGGGGTATGATCCGATACAG | 58.464 | 52.381 | 5.76 | 0.00 | 31.38 | 2.74 |
303 | 335 | 2.496470 | GGGGGTATGATCCGATACAGTC | 59.504 | 54.545 | 5.76 | 0.00 | 31.38 | 3.51 |
305 | 337 | 3.193691 | GGGGTATGATCCGATACAGTCAG | 59.806 | 52.174 | 5.76 | 0.00 | 31.38 | 3.51 |
306 | 338 | 3.827302 | GGGTATGATCCGATACAGTCAGT | 59.173 | 47.826 | 5.76 | 0.00 | 31.38 | 3.41 |
307 | 339 | 4.281182 | GGGTATGATCCGATACAGTCAGTT | 59.719 | 45.833 | 5.76 | 0.00 | 31.38 | 3.16 |
308 | 340 | 5.221461 | GGGTATGATCCGATACAGTCAGTTT | 60.221 | 44.000 | 5.76 | 0.00 | 31.38 | 2.66 |
309 | 341 | 6.281405 | GGTATGATCCGATACAGTCAGTTTT | 58.719 | 40.000 | 5.76 | 0.00 | 31.38 | 2.43 |
310 | 342 | 6.421202 | GGTATGATCCGATACAGTCAGTTTTC | 59.579 | 42.308 | 5.76 | 0.00 | 31.38 | 2.29 |
311 | 343 | 4.421058 | TGATCCGATACAGTCAGTTTTCG | 58.579 | 43.478 | 0.00 | 0.00 | 35.60 | 3.46 |
312 | 344 | 3.928727 | TCCGATACAGTCAGTTTTCGT | 57.071 | 42.857 | 0.00 | 0.00 | 34.65 | 3.85 |
313 | 345 | 4.247267 | TCCGATACAGTCAGTTTTCGTT | 57.753 | 40.909 | 0.00 | 0.00 | 34.65 | 3.85 |
314 | 346 | 3.985279 | TCCGATACAGTCAGTTTTCGTTG | 59.015 | 43.478 | 0.00 | 0.00 | 34.65 | 4.10 |
315 | 347 | 3.985279 | CCGATACAGTCAGTTTTCGTTGA | 59.015 | 43.478 | 0.00 | 0.00 | 34.65 | 3.18 |
316 | 348 | 4.625742 | CCGATACAGTCAGTTTTCGTTGAT | 59.374 | 41.667 | 0.00 | 0.00 | 34.65 | 2.57 |
317 | 349 | 5.120208 | CCGATACAGTCAGTTTTCGTTGATT | 59.880 | 40.000 | 0.00 | 0.00 | 34.65 | 2.57 |
318 | 350 | 6.009474 | CGATACAGTCAGTTTTCGTTGATTG | 58.991 | 40.000 | 0.00 | 0.00 | 37.16 | 2.67 |
319 | 351 | 3.952535 | ACAGTCAGTTTTCGTTGATTGC | 58.047 | 40.909 | 0.00 | 0.00 | 35.27 | 3.56 |
320 | 352 | 3.627577 | ACAGTCAGTTTTCGTTGATTGCT | 59.372 | 39.130 | 0.00 | 0.00 | 35.27 | 3.91 |
321 | 353 | 4.214437 | CAGTCAGTTTTCGTTGATTGCTC | 58.786 | 43.478 | 0.00 | 0.00 | 0.00 | 4.26 |
322 | 354 | 4.024556 | CAGTCAGTTTTCGTTGATTGCTCT | 60.025 | 41.667 | 0.00 | 0.00 | 0.00 | 4.09 |
323 | 355 | 5.177511 | CAGTCAGTTTTCGTTGATTGCTCTA | 59.822 | 40.000 | 0.00 | 0.00 | 0.00 | 2.43 |
324 | 356 | 5.177696 | AGTCAGTTTTCGTTGATTGCTCTAC | 59.822 | 40.000 | 0.00 | 0.00 | 0.00 | 2.59 |
336 | 368 | 8.813263 | GTTGATTGCTCTACGAGAAAATAAAG | 57.187 | 34.615 | 0.00 | 0.00 | 30.20 | 1.85 |
337 | 369 | 8.656849 | GTTGATTGCTCTACGAGAAAATAAAGA | 58.343 | 33.333 | 0.00 | 0.00 | 30.20 | 2.52 |
338 | 370 | 8.771920 | TGATTGCTCTACGAGAAAATAAAGAA | 57.228 | 30.769 | 0.00 | 0.00 | 30.20 | 2.52 |
339 | 371 | 8.873830 | TGATTGCTCTACGAGAAAATAAAGAAG | 58.126 | 33.333 | 0.00 | 0.00 | 30.20 | 2.85 |
340 | 372 | 8.779354 | ATTGCTCTACGAGAAAATAAAGAAGT | 57.221 | 30.769 | 0.00 | 0.00 | 30.20 | 3.01 |
341 | 373 | 8.603242 | TTGCTCTACGAGAAAATAAAGAAGTT | 57.397 | 30.769 | 0.00 | 0.00 | 0.00 | 2.66 |
342 | 374 | 8.603242 | TGCTCTACGAGAAAATAAAGAAGTTT | 57.397 | 30.769 | 0.00 | 0.00 | 0.00 | 2.66 |
343 | 375 | 9.052759 | TGCTCTACGAGAAAATAAAGAAGTTTT | 57.947 | 29.630 | 0.00 | 0.00 | 0.00 | 2.43 |
344 | 376 | 9.880064 | GCTCTACGAGAAAATAAAGAAGTTTTT | 57.120 | 29.630 | 0.00 | 0.00 | 0.00 | 1.94 |
363 | 395 | 4.695217 | TTTTCTTAATTGCGTGCCCTAG | 57.305 | 40.909 | 0.00 | 0.00 | 0.00 | 3.02 |
364 | 396 | 3.620427 | TTCTTAATTGCGTGCCCTAGA | 57.380 | 42.857 | 0.00 | 0.00 | 0.00 | 2.43 |
365 | 397 | 3.620427 | TCTTAATTGCGTGCCCTAGAA | 57.380 | 42.857 | 0.00 | 0.00 | 0.00 | 2.10 |
366 | 398 | 3.945346 | TCTTAATTGCGTGCCCTAGAAA | 58.055 | 40.909 | 0.00 | 0.00 | 0.00 | 2.52 |
367 | 399 | 4.328536 | TCTTAATTGCGTGCCCTAGAAAA | 58.671 | 39.130 | 0.00 | 0.00 | 0.00 | 2.29 |
368 | 400 | 4.394920 | TCTTAATTGCGTGCCCTAGAAAAG | 59.605 | 41.667 | 0.00 | 0.00 | 0.00 | 2.27 |
369 | 401 | 2.200373 | ATTGCGTGCCCTAGAAAAGT | 57.800 | 45.000 | 0.00 | 0.00 | 0.00 | 2.66 |
370 | 402 | 1.975660 | TTGCGTGCCCTAGAAAAGTT | 58.024 | 45.000 | 0.00 | 0.00 | 0.00 | 2.66 |
371 | 403 | 1.975660 | TGCGTGCCCTAGAAAAGTTT | 58.024 | 45.000 | 0.00 | 0.00 | 0.00 | 2.66 |
372 | 404 | 3.128852 | TGCGTGCCCTAGAAAAGTTTA | 57.871 | 42.857 | 0.00 | 0.00 | 0.00 | 2.01 |
373 | 405 | 2.809696 | TGCGTGCCCTAGAAAAGTTTAC | 59.190 | 45.455 | 0.00 | 0.00 | 0.00 | 2.01 |
374 | 406 | 2.809696 | GCGTGCCCTAGAAAAGTTTACA | 59.190 | 45.455 | 0.00 | 0.00 | 0.00 | 2.41 |
375 | 407 | 3.120304 | GCGTGCCCTAGAAAAGTTTACAG | 60.120 | 47.826 | 0.00 | 0.00 | 0.00 | 2.74 |
376 | 408 | 3.435671 | CGTGCCCTAGAAAAGTTTACAGG | 59.564 | 47.826 | 0.00 | 0.00 | 0.00 | 4.00 |
377 | 409 | 4.395625 | GTGCCCTAGAAAAGTTTACAGGT | 58.604 | 43.478 | 0.00 | 0.00 | 0.00 | 4.00 |
378 | 410 | 4.825634 | GTGCCCTAGAAAAGTTTACAGGTT | 59.174 | 41.667 | 0.00 | 0.00 | 0.00 | 3.50 |
379 | 411 | 5.301045 | GTGCCCTAGAAAAGTTTACAGGTTT | 59.699 | 40.000 | 0.00 | 0.00 | 0.00 | 3.27 |
380 | 412 | 5.533528 | TGCCCTAGAAAAGTTTACAGGTTTC | 59.466 | 40.000 | 0.00 | 0.00 | 0.00 | 2.78 |
381 | 413 | 5.334646 | GCCCTAGAAAAGTTTACAGGTTTCG | 60.335 | 44.000 | 0.00 | 0.00 | 35.58 | 3.46 |
382 | 414 | 5.993441 | CCCTAGAAAAGTTTACAGGTTTCGA | 59.007 | 40.000 | 0.00 | 0.00 | 35.58 | 3.71 |
383 | 415 | 6.653740 | CCCTAGAAAAGTTTACAGGTTTCGAT | 59.346 | 38.462 | 0.00 | 0.00 | 35.58 | 3.59 |
384 | 416 | 7.174426 | CCCTAGAAAAGTTTACAGGTTTCGATT | 59.826 | 37.037 | 0.00 | 0.00 | 35.58 | 3.34 |
385 | 417 | 8.228464 | CCTAGAAAAGTTTACAGGTTTCGATTC | 58.772 | 37.037 | 0.00 | 0.00 | 35.58 | 2.52 |
386 | 418 | 7.562454 | AGAAAAGTTTACAGGTTTCGATTCA | 57.438 | 32.000 | 0.00 | 0.00 | 35.58 | 2.57 |
387 | 419 | 7.639945 | AGAAAAGTTTACAGGTTTCGATTCAG | 58.360 | 34.615 | 0.00 | 0.00 | 35.58 | 3.02 |
388 | 420 | 7.497909 | AGAAAAGTTTACAGGTTTCGATTCAGA | 59.502 | 33.333 | 0.00 | 0.00 | 35.58 | 3.27 |
389 | 421 | 7.745620 | AAAGTTTACAGGTTTCGATTCAGAT | 57.254 | 32.000 | 0.00 | 0.00 | 0.00 | 2.90 |
390 | 422 | 7.745620 | AAGTTTACAGGTTTCGATTCAGATT | 57.254 | 32.000 | 0.00 | 0.00 | 0.00 | 2.40 |
391 | 423 | 8.842358 | AAGTTTACAGGTTTCGATTCAGATTA | 57.158 | 30.769 | 0.00 | 0.00 | 0.00 | 1.75 |
392 | 424 | 8.842358 | AGTTTACAGGTTTCGATTCAGATTAA | 57.158 | 30.769 | 0.00 | 0.00 | 0.00 | 1.40 |
393 | 425 | 9.280174 | AGTTTACAGGTTTCGATTCAGATTAAA | 57.720 | 29.630 | 0.00 | 0.00 | 0.00 | 1.52 |
394 | 426 | 9.887406 | GTTTACAGGTTTCGATTCAGATTAAAA | 57.113 | 29.630 | 0.00 | 0.00 | 0.00 | 1.52 |
396 | 428 | 7.145932 | ACAGGTTTCGATTCAGATTAAAAGG | 57.854 | 36.000 | 0.00 | 0.00 | 0.00 | 3.11 |
397 | 429 | 6.715264 | ACAGGTTTCGATTCAGATTAAAAGGT | 59.285 | 34.615 | 0.00 | 0.00 | 0.00 | 3.50 |
398 | 430 | 7.023575 | CAGGTTTCGATTCAGATTAAAAGGTG | 58.976 | 38.462 | 0.00 | 0.00 | 0.00 | 4.00 |
399 | 431 | 6.151144 | AGGTTTCGATTCAGATTAAAAGGTGG | 59.849 | 38.462 | 0.00 | 0.00 | 0.00 | 4.61 |
400 | 432 | 6.072119 | GGTTTCGATTCAGATTAAAAGGTGGT | 60.072 | 38.462 | 0.00 | 0.00 | 0.00 | 4.16 |
401 | 433 | 6.494893 | TTCGATTCAGATTAAAAGGTGGTG | 57.505 | 37.500 | 0.00 | 0.00 | 0.00 | 4.17 |
402 | 434 | 5.800296 | TCGATTCAGATTAAAAGGTGGTGA | 58.200 | 37.500 | 0.00 | 0.00 | 0.00 | 4.02 |
403 | 435 | 6.414732 | TCGATTCAGATTAAAAGGTGGTGAT | 58.585 | 36.000 | 0.00 | 0.00 | 0.00 | 3.06 |
404 | 436 | 6.884295 | TCGATTCAGATTAAAAGGTGGTGATT | 59.116 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
405 | 437 | 8.044309 | TCGATTCAGATTAAAAGGTGGTGATTA | 58.956 | 33.333 | 0.00 | 0.00 | 0.00 | 1.75 |
406 | 438 | 8.122952 | CGATTCAGATTAAAAGGTGGTGATTAC | 58.877 | 37.037 | 0.00 | 0.00 | 0.00 | 1.89 |
407 | 439 | 9.178758 | GATTCAGATTAAAAGGTGGTGATTACT | 57.821 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
409 | 441 | 9.667107 | TTCAGATTAAAAGGTGGTGATTACTAG | 57.333 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
410 | 442 | 9.042450 | TCAGATTAAAAGGTGGTGATTACTAGA | 57.958 | 33.333 | 0.00 | 0.00 | 0.00 | 2.43 |
411 | 443 | 9.667107 | CAGATTAAAAGGTGGTGATTACTAGAA | 57.333 | 33.333 | 0.00 | 0.00 | 0.00 | 2.10 |
412 | 444 | 9.892130 | AGATTAAAAGGTGGTGATTACTAGAAG | 57.108 | 33.333 | 0.00 | 0.00 | 0.00 | 2.85 |
413 | 445 | 9.110502 | GATTAAAAGGTGGTGATTACTAGAAGG | 57.889 | 37.037 | 0.00 | 0.00 | 0.00 | 3.46 |
414 | 446 | 6.449830 | AAAAGGTGGTGATTACTAGAAGGT | 57.550 | 37.500 | 0.00 | 0.00 | 0.00 | 3.50 |
415 | 447 | 7.563724 | AAAAGGTGGTGATTACTAGAAGGTA | 57.436 | 36.000 | 0.00 | 0.00 | 0.00 | 3.08 |
416 | 448 | 6.541934 | AAGGTGGTGATTACTAGAAGGTAC | 57.458 | 41.667 | 0.00 | 0.00 | 0.00 | 3.34 |
417 | 449 | 4.961099 | AGGTGGTGATTACTAGAAGGTACC | 59.039 | 45.833 | 2.73 | 2.73 | 0.00 | 3.34 |
418 | 450 | 4.100653 | GGTGGTGATTACTAGAAGGTACCC | 59.899 | 50.000 | 8.74 | 0.00 | 0.00 | 3.69 |
419 | 451 | 4.100653 | GTGGTGATTACTAGAAGGTACCCC | 59.899 | 50.000 | 8.74 | 0.36 | 0.00 | 4.95 |
420 | 452 | 4.015918 | TGGTGATTACTAGAAGGTACCCCT | 60.016 | 45.833 | 8.74 | 8.98 | 45.63 | 4.79 |
470 | 502 | 9.996554 | TCTTTTGTCTACAAATCAATCTACTCA | 57.003 | 29.630 | 8.96 | 0.00 | 44.30 | 3.41 |
474 | 506 | 9.516314 | TTGTCTACAAATCAATCTACTCATACG | 57.484 | 33.333 | 0.00 | 0.00 | 32.11 | 3.06 |
475 | 507 | 8.683615 | TGTCTACAAATCAATCTACTCATACGT | 58.316 | 33.333 | 0.00 | 0.00 | 0.00 | 3.57 |
476 | 508 | 9.517609 | GTCTACAAATCAATCTACTCATACGTT | 57.482 | 33.333 | 0.00 | 0.00 | 0.00 | 3.99 |
479 | 511 | 7.464358 | ACAAATCAATCTACTCATACGTTTGC | 58.536 | 34.615 | 0.00 | 0.00 | 0.00 | 3.68 |
480 | 512 | 7.119116 | ACAAATCAATCTACTCATACGTTTGCA | 59.881 | 33.333 | 0.00 | 0.00 | 0.00 | 4.08 |
481 | 513 | 6.834959 | ATCAATCTACTCATACGTTTGCAG | 57.165 | 37.500 | 0.00 | 0.00 | 0.00 | 4.41 |
482 | 514 | 5.109210 | TCAATCTACTCATACGTTTGCAGG | 58.891 | 41.667 | 0.00 | 0.00 | 0.00 | 4.85 |
483 | 515 | 2.888594 | TCTACTCATACGTTTGCAGGC | 58.111 | 47.619 | 0.00 | 0.00 | 0.00 | 4.85 |
484 | 516 | 2.496070 | TCTACTCATACGTTTGCAGGCT | 59.504 | 45.455 | 0.00 | 0.00 | 0.00 | 4.58 |
485 | 517 | 3.697542 | TCTACTCATACGTTTGCAGGCTA | 59.302 | 43.478 | 0.00 | 0.00 | 0.00 | 3.93 |
486 | 518 | 3.328382 | ACTCATACGTTTGCAGGCTAA | 57.672 | 42.857 | 0.00 | 0.00 | 0.00 | 3.09 |
487 | 519 | 3.873910 | ACTCATACGTTTGCAGGCTAAT | 58.126 | 40.909 | 0.00 | 0.00 | 0.00 | 1.73 |
488 | 520 | 5.018539 | ACTCATACGTTTGCAGGCTAATA | 57.981 | 39.130 | 0.00 | 0.00 | 0.00 | 0.98 |
489 | 521 | 5.611374 | ACTCATACGTTTGCAGGCTAATAT | 58.389 | 37.500 | 0.00 | 0.00 | 0.00 | 1.28 |
490 | 522 | 5.466728 | ACTCATACGTTTGCAGGCTAATATG | 59.533 | 40.000 | 0.00 | 0.00 | 0.00 | 1.78 |
491 | 523 | 5.606505 | TCATACGTTTGCAGGCTAATATGA | 58.393 | 37.500 | 0.00 | 7.30 | 0.00 | 2.15 |
492 | 524 | 5.465390 | TCATACGTTTGCAGGCTAATATGAC | 59.535 | 40.000 | 0.00 | 0.00 | 0.00 | 3.06 |
493 | 525 | 2.607635 | ACGTTTGCAGGCTAATATGACG | 59.392 | 45.455 | 0.00 | 0.00 | 0.00 | 4.35 |
494 | 526 | 2.863740 | CGTTTGCAGGCTAATATGACGA | 59.136 | 45.455 | 0.00 | 0.00 | 0.00 | 4.20 |
495 | 527 | 3.494626 | CGTTTGCAGGCTAATATGACGAT | 59.505 | 43.478 | 0.00 | 0.00 | 0.00 | 3.73 |
496 | 528 | 4.684242 | CGTTTGCAGGCTAATATGACGATA | 59.316 | 41.667 | 0.00 | 0.00 | 0.00 | 2.92 |
497 | 529 | 5.176774 | CGTTTGCAGGCTAATATGACGATAA | 59.823 | 40.000 | 0.00 | 0.00 | 0.00 | 1.75 |
498 | 530 | 6.363473 | GTTTGCAGGCTAATATGACGATAAC | 58.637 | 40.000 | 0.00 | 0.00 | 0.00 | 1.89 |
499 | 531 | 4.566004 | TGCAGGCTAATATGACGATAACC | 58.434 | 43.478 | 0.00 | 0.00 | 0.00 | 2.85 |
500 | 532 | 4.283467 | TGCAGGCTAATATGACGATAACCT | 59.717 | 41.667 | 0.00 | 0.00 | 0.00 | 3.50 |
501 | 533 | 5.221641 | TGCAGGCTAATATGACGATAACCTT | 60.222 | 40.000 | 0.00 | 0.00 | 0.00 | 3.50 |
502 | 534 | 5.701290 | GCAGGCTAATATGACGATAACCTTT | 59.299 | 40.000 | 0.00 | 0.00 | 0.00 | 3.11 |
503 | 535 | 6.204882 | GCAGGCTAATATGACGATAACCTTTT | 59.795 | 38.462 | 0.00 | 0.00 | 0.00 | 2.27 |
504 | 536 | 7.386848 | GCAGGCTAATATGACGATAACCTTTTA | 59.613 | 37.037 | 0.00 | 0.00 | 0.00 | 1.52 |
505 | 537 | 9.268268 | CAGGCTAATATGACGATAACCTTTTAA | 57.732 | 33.333 | 0.00 | 0.00 | 0.00 | 1.52 |
506 | 538 | 9.841295 | AGGCTAATATGACGATAACCTTTTAAA | 57.159 | 29.630 | 0.00 | 0.00 | 0.00 | 1.52 |
541 | 573 | 7.967890 | AAGATTCATGCAAACTTTTAAAGGG | 57.032 | 32.000 | 9.64 | 0.00 | 0.00 | 3.95 |
542 | 574 | 6.466812 | AGATTCATGCAAACTTTTAAAGGGG | 58.533 | 36.000 | 9.64 | 0.00 | 0.00 | 4.79 |
543 | 575 | 5.622346 | TTCATGCAAACTTTTAAAGGGGT | 57.378 | 34.783 | 9.64 | 0.00 | 0.00 | 4.95 |
544 | 576 | 5.622346 | TCATGCAAACTTTTAAAGGGGTT | 57.378 | 34.783 | 9.64 | 0.76 | 0.00 | 4.11 |
545 | 577 | 5.363939 | TCATGCAAACTTTTAAAGGGGTTG | 58.636 | 37.500 | 9.64 | 13.31 | 0.00 | 3.77 |
546 | 578 | 4.828072 | TGCAAACTTTTAAAGGGGTTGT | 57.172 | 36.364 | 16.72 | 0.00 | 0.00 | 3.32 |
547 | 579 | 5.934402 | TGCAAACTTTTAAAGGGGTTGTA | 57.066 | 34.783 | 16.72 | 12.30 | 0.00 | 2.41 |
548 | 580 | 5.662456 | TGCAAACTTTTAAAGGGGTTGTAC | 58.338 | 37.500 | 16.72 | 7.04 | 0.00 | 2.90 |
549 | 581 | 5.051816 | GCAAACTTTTAAAGGGGTTGTACC | 58.948 | 41.667 | 16.72 | 0.00 | 37.60 | 3.34 |
550 | 582 | 5.395435 | GCAAACTTTTAAAGGGGTTGTACCA | 60.395 | 40.000 | 16.72 | 0.00 | 41.02 | 3.25 |
551 | 583 | 6.641474 | CAAACTTTTAAAGGGGTTGTACCAA | 58.359 | 36.000 | 9.64 | 0.00 | 41.02 | 3.67 |
552 | 584 | 5.857471 | ACTTTTAAAGGGGTTGTACCAAC | 57.143 | 39.130 | 9.64 | 0.00 | 41.02 | 3.77 |
553 | 585 | 4.338964 | ACTTTTAAAGGGGTTGTACCAACG | 59.661 | 41.667 | 9.64 | 0.00 | 41.02 | 4.10 |
554 | 586 | 1.894881 | TAAAGGGGTTGTACCAACGC | 58.105 | 50.000 | 13.79 | 13.79 | 41.02 | 4.84 |
555 | 587 | 1.167781 | AAAGGGGTTGTACCAACGCG | 61.168 | 55.000 | 3.53 | 3.53 | 41.02 | 6.01 |
556 | 588 | 3.729698 | GGGGTTGTACCAACGCGC | 61.730 | 66.667 | 5.73 | 0.00 | 41.02 | 6.86 |
557 | 589 | 2.973600 | GGGTTGTACCAACGCGCA | 60.974 | 61.111 | 5.73 | 0.00 | 41.02 | 6.09 |
558 | 590 | 2.544698 | GGGTTGTACCAACGCGCAA | 61.545 | 57.895 | 5.73 | 0.00 | 41.02 | 4.85 |
559 | 591 | 1.355916 | GGTTGTACCAACGCGCAAA | 59.644 | 52.632 | 5.73 | 0.00 | 38.42 | 3.68 |
560 | 592 | 0.248539 | GGTTGTACCAACGCGCAAAA | 60.249 | 50.000 | 5.73 | 0.00 | 38.42 | 2.44 |
561 | 593 | 0.841356 | GTTGTACCAACGCGCAAAAC | 59.159 | 50.000 | 5.73 | 0.00 | 0.00 | 2.43 |
562 | 594 | 0.450583 | TTGTACCAACGCGCAAAACA | 59.549 | 45.000 | 5.73 | 1.33 | 0.00 | 2.83 |
563 | 595 | 0.248134 | TGTACCAACGCGCAAAACAC | 60.248 | 50.000 | 5.73 | 0.00 | 0.00 | 3.32 |
590 | 622 | 5.163814 | GCGTGAGATGAGCTTAGACAAAAAT | 60.164 | 40.000 | 0.00 | 0.00 | 0.00 | 1.82 |
591 | 623 | 6.036083 | GCGTGAGATGAGCTTAGACAAAAATA | 59.964 | 38.462 | 0.00 | 0.00 | 0.00 | 1.40 |
599 | 634 | 9.624373 | ATGAGCTTAGACAAAAATATCTCATGT | 57.376 | 29.630 | 0.00 | 0.00 | 37.38 | 3.21 |
606 | 641 | 7.310664 | AGACAAAAATATCTCATGTGTGCTTG | 58.689 | 34.615 | 0.00 | 0.00 | 0.00 | 4.01 |
607 | 642 | 7.175467 | AGACAAAAATATCTCATGTGTGCTTGA | 59.825 | 33.333 | 0.00 | 0.00 | 0.00 | 3.02 |
611 | 646 | 9.715121 | AAAAATATCTCATGTGTGCTTGAAATT | 57.285 | 25.926 | 0.00 | 0.00 | 0.00 | 1.82 |
612 | 647 | 8.697846 | AAATATCTCATGTGTGCTTGAAATTG | 57.302 | 30.769 | 0.00 | 0.00 | 0.00 | 2.32 |
613 | 648 | 5.970317 | ATCTCATGTGTGCTTGAAATTGA | 57.030 | 34.783 | 0.00 | 0.00 | 0.00 | 2.57 |
614 | 649 | 5.112220 | TCTCATGTGTGCTTGAAATTGAC | 57.888 | 39.130 | 0.00 | 0.00 | 0.00 | 3.18 |
615 | 650 | 4.823442 | TCTCATGTGTGCTTGAAATTGACT | 59.177 | 37.500 | 0.00 | 0.00 | 0.00 | 3.41 |
616 | 651 | 5.300034 | TCTCATGTGTGCTTGAAATTGACTT | 59.700 | 36.000 | 0.00 | 0.00 | 0.00 | 3.01 |
617 | 652 | 5.283294 | TCATGTGTGCTTGAAATTGACTTG | 58.717 | 37.500 | 0.00 | 0.00 | 0.00 | 3.16 |
618 | 653 | 3.446799 | TGTGTGCTTGAAATTGACTTGC | 58.553 | 40.909 | 0.00 | 0.00 | 0.00 | 4.01 |
619 | 654 | 2.468777 | GTGTGCTTGAAATTGACTTGCG | 59.531 | 45.455 | 0.00 | 0.00 | 0.00 | 4.85 |
620 | 655 | 1.453148 | GTGCTTGAAATTGACTTGCGC | 59.547 | 47.619 | 0.00 | 0.00 | 0.00 | 6.09 |
621 | 656 | 1.063031 | GCTTGAAATTGACTTGCGCC | 58.937 | 50.000 | 4.18 | 0.00 | 0.00 | 6.53 |
622 | 657 | 1.602668 | GCTTGAAATTGACTTGCGCCA | 60.603 | 47.619 | 4.18 | 0.00 | 0.00 | 5.69 |
623 | 658 | 2.741612 | CTTGAAATTGACTTGCGCCAA | 58.258 | 42.857 | 4.18 | 1.27 | 0.00 | 4.52 |
624 | 659 | 3.319755 | CTTGAAATTGACTTGCGCCAAT | 58.680 | 40.909 | 4.18 | 4.12 | 34.75 | 3.16 |
625 | 660 | 4.484236 | CTTGAAATTGACTTGCGCCAATA | 58.516 | 39.130 | 4.18 | 0.00 | 33.13 | 1.90 |
626 | 661 | 3.832276 | TGAAATTGACTTGCGCCAATAC | 58.168 | 40.909 | 4.18 | 6.17 | 33.13 | 1.89 |
627 | 662 | 3.505680 | TGAAATTGACTTGCGCCAATACT | 59.494 | 39.130 | 4.18 | 0.00 | 33.13 | 2.12 |
628 | 663 | 4.022416 | TGAAATTGACTTGCGCCAATACTT | 60.022 | 37.500 | 4.18 | 0.00 | 33.13 | 2.24 |
629 | 664 | 2.987413 | TTGACTTGCGCCAATACTTG | 57.013 | 45.000 | 4.18 | 0.00 | 0.00 | 3.16 |
630 | 665 | 1.890876 | TGACTTGCGCCAATACTTGT | 58.109 | 45.000 | 4.18 | 0.00 | 0.00 | 3.16 |
631 | 666 | 3.046968 | TGACTTGCGCCAATACTTGTA | 57.953 | 42.857 | 4.18 | 0.00 | 0.00 | 2.41 |
632 | 667 | 3.000041 | TGACTTGCGCCAATACTTGTAG | 59.000 | 45.455 | 4.18 | 0.00 | 0.00 | 2.74 |
633 | 668 | 1.737793 | ACTTGCGCCAATACTTGTAGC | 59.262 | 47.619 | 4.18 | 0.00 | 33.60 | 3.58 |
640 | 675 | 4.616181 | GCCAATACTTGTAGCGATTGTT | 57.384 | 40.909 | 0.00 | 0.00 | 0.00 | 2.83 |
641 | 676 | 4.342772 | GCCAATACTTGTAGCGATTGTTG | 58.657 | 43.478 | 0.00 | 0.00 | 0.00 | 3.33 |
642 | 677 | 4.094294 | GCCAATACTTGTAGCGATTGTTGA | 59.906 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
643 | 678 | 5.220854 | GCCAATACTTGTAGCGATTGTTGAT | 60.221 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
644 | 679 | 6.194463 | CCAATACTTGTAGCGATTGTTGATG | 58.806 | 40.000 | 0.00 | 0.00 | 0.00 | 3.07 |
645 | 680 | 6.037062 | CCAATACTTGTAGCGATTGTTGATGA | 59.963 | 38.462 | 0.00 | 0.00 | 0.00 | 2.92 |
646 | 681 | 6.834959 | ATACTTGTAGCGATTGTTGATGAG | 57.165 | 37.500 | 0.00 | 0.00 | 0.00 | 2.90 |
647 | 682 | 3.372206 | ACTTGTAGCGATTGTTGATGAGC | 59.628 | 43.478 | 0.00 | 0.00 | 0.00 | 4.26 |
648 | 683 | 3.251479 | TGTAGCGATTGTTGATGAGCT | 57.749 | 42.857 | 0.00 | 0.00 | 38.57 | 4.09 |
649 | 684 | 4.385358 | TGTAGCGATTGTTGATGAGCTA | 57.615 | 40.909 | 0.00 | 0.00 | 36.30 | 3.32 |
650 | 685 | 4.754322 | TGTAGCGATTGTTGATGAGCTAA | 58.246 | 39.130 | 0.00 | 0.00 | 38.66 | 3.09 |
651 | 686 | 4.805719 | TGTAGCGATTGTTGATGAGCTAAG | 59.194 | 41.667 | 0.00 | 0.00 | 38.66 | 2.18 |
652 | 687 | 4.128925 | AGCGATTGTTGATGAGCTAAGA | 57.871 | 40.909 | 0.00 | 0.00 | 32.73 | 2.10 |
653 | 688 | 4.701765 | AGCGATTGTTGATGAGCTAAGAT | 58.298 | 39.130 | 0.00 | 0.00 | 32.73 | 2.40 |
654 | 689 | 4.510711 | AGCGATTGTTGATGAGCTAAGATG | 59.489 | 41.667 | 0.00 | 0.00 | 32.73 | 2.90 |
655 | 690 | 4.272018 | GCGATTGTTGATGAGCTAAGATGT | 59.728 | 41.667 | 0.00 | 0.00 | 0.00 | 3.06 |
656 | 691 | 5.735324 | CGATTGTTGATGAGCTAAGATGTG | 58.265 | 41.667 | 0.00 | 0.00 | 0.00 | 3.21 |
657 | 692 | 5.521372 | CGATTGTTGATGAGCTAAGATGTGA | 59.479 | 40.000 | 0.00 | 0.00 | 0.00 | 3.58 |
658 | 693 | 6.036408 | CGATTGTTGATGAGCTAAGATGTGAA | 59.964 | 38.462 | 0.00 | 0.00 | 0.00 | 3.18 |
659 | 694 | 6.732531 | TTGTTGATGAGCTAAGATGTGAAG | 57.267 | 37.500 | 0.00 | 0.00 | 0.00 | 3.02 |
660 | 695 | 4.633126 | TGTTGATGAGCTAAGATGTGAAGC | 59.367 | 41.667 | 0.00 | 0.00 | 36.48 | 3.86 |
661 | 696 | 3.801698 | TGATGAGCTAAGATGTGAAGCC | 58.198 | 45.455 | 0.00 | 0.00 | 36.92 | 4.35 |
662 | 697 | 3.198417 | TGATGAGCTAAGATGTGAAGCCA | 59.802 | 43.478 | 0.00 | 0.00 | 36.92 | 4.75 |
663 | 698 | 3.701205 | TGAGCTAAGATGTGAAGCCAA | 57.299 | 42.857 | 0.00 | 0.00 | 36.92 | 4.52 |
664 | 699 | 4.019792 | TGAGCTAAGATGTGAAGCCAAA | 57.980 | 40.909 | 0.00 | 0.00 | 36.92 | 3.28 |
665 | 700 | 4.592942 | TGAGCTAAGATGTGAAGCCAAAT | 58.407 | 39.130 | 0.00 | 0.00 | 36.92 | 2.32 |
666 | 701 | 5.744171 | TGAGCTAAGATGTGAAGCCAAATA | 58.256 | 37.500 | 0.00 | 0.00 | 36.92 | 1.40 |
667 | 702 | 6.359804 | TGAGCTAAGATGTGAAGCCAAATAT | 58.640 | 36.000 | 0.00 | 0.00 | 36.92 | 1.28 |
668 | 703 | 7.508687 | TGAGCTAAGATGTGAAGCCAAATATA | 58.491 | 34.615 | 0.00 | 0.00 | 36.92 | 0.86 |
669 | 704 | 7.992608 | TGAGCTAAGATGTGAAGCCAAATATAA | 59.007 | 33.333 | 0.00 | 0.00 | 36.92 | 0.98 |
670 | 705 | 8.388484 | AGCTAAGATGTGAAGCCAAATATAAG | 57.612 | 34.615 | 0.00 | 0.00 | 36.92 | 1.73 |
671 | 706 | 7.995488 | AGCTAAGATGTGAAGCCAAATATAAGT | 59.005 | 33.333 | 0.00 | 0.00 | 36.92 | 2.24 |
672 | 707 | 9.273016 | GCTAAGATGTGAAGCCAAATATAAGTA | 57.727 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
676 | 711 | 9.988815 | AGATGTGAAGCCAAATATAAGTACTAG | 57.011 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
677 | 712 | 9.209175 | GATGTGAAGCCAAATATAAGTACTAGG | 57.791 | 37.037 | 0.00 | 0.00 | 0.00 | 3.02 |
678 | 713 | 8.086143 | TGTGAAGCCAAATATAAGTACTAGGT | 57.914 | 34.615 | 0.00 | 0.00 | 0.00 | 3.08 |
679 | 714 | 9.204337 | TGTGAAGCCAAATATAAGTACTAGGTA | 57.796 | 33.333 | 0.00 | 0.00 | 0.00 | 3.08 |
700 | 735 | 8.850007 | AGGTATCTTTTCTAAAGAGTGAAACC | 57.150 | 34.615 | 7.78 | 8.98 | 37.80 | 3.27 |
701 | 736 | 7.883833 | AGGTATCTTTTCTAAAGAGTGAAACCC | 59.116 | 37.037 | 7.78 | 1.38 | 37.80 | 4.11 |
702 | 737 | 7.120873 | GGTATCTTTTCTAAAGAGTGAAACCCC | 59.879 | 40.741 | 7.78 | 0.00 | 37.80 | 4.95 |
703 | 738 | 5.061179 | TCTTTTCTAAAGAGTGAAACCCCG | 58.939 | 41.667 | 0.00 | 0.00 | 37.80 | 5.73 |
704 | 739 | 2.467566 | TCTAAAGAGTGAAACCCCGC | 57.532 | 50.000 | 0.00 | 0.00 | 37.80 | 6.13 |
705 | 740 | 1.975680 | TCTAAAGAGTGAAACCCCGCT | 59.024 | 47.619 | 0.00 | 0.00 | 37.80 | 5.52 |
706 | 741 | 2.370849 | TCTAAAGAGTGAAACCCCGCTT | 59.629 | 45.455 | 0.00 | 0.00 | 37.80 | 4.68 |
707 | 742 | 2.067365 | AAAGAGTGAAACCCCGCTTT | 57.933 | 45.000 | 0.00 | 0.00 | 37.80 | 3.51 |
708 | 743 | 1.318576 | AAGAGTGAAACCCCGCTTTG | 58.681 | 50.000 | 0.00 | 0.00 | 37.80 | 2.77 |
709 | 744 | 0.537371 | AGAGTGAAACCCCGCTTTGG | 60.537 | 55.000 | 0.00 | 0.00 | 37.80 | 3.28 |
710 | 745 | 0.536460 | GAGTGAAACCCCGCTTTGGA | 60.536 | 55.000 | 0.00 | 0.00 | 37.52 | 3.53 |
711 | 746 | 0.112412 | AGTGAAACCCCGCTTTGGAT | 59.888 | 50.000 | 0.00 | 0.00 | 37.52 | 3.41 |
712 | 747 | 1.353022 | AGTGAAACCCCGCTTTGGATA | 59.647 | 47.619 | 0.00 | 0.00 | 37.52 | 2.59 |
713 | 748 | 2.164338 | GTGAAACCCCGCTTTGGATAA | 58.836 | 47.619 | 0.00 | 0.00 | 42.00 | 1.75 |
714 | 749 | 2.758423 | GTGAAACCCCGCTTTGGATAAT | 59.242 | 45.455 | 0.00 | 0.00 | 42.00 | 1.28 |
743 | 785 | 3.069586 | CGAGCCATGGATCCAAGTAGTAA | 59.930 | 47.826 | 23.90 | 0.00 | 0.00 | 2.24 |
745 | 787 | 3.136626 | AGCCATGGATCCAAGTAGTAACC | 59.863 | 47.826 | 20.67 | 0.00 | 0.00 | 2.85 |
746 | 788 | 3.118038 | GCCATGGATCCAAGTAGTAACCA | 60.118 | 47.826 | 20.67 | 0.00 | 0.00 | 3.67 |
747 | 789 | 4.708177 | CCATGGATCCAAGTAGTAACCAG | 58.292 | 47.826 | 20.67 | 0.00 | 0.00 | 4.00 |
748 | 790 | 4.444876 | CCATGGATCCAAGTAGTAACCAGG | 60.445 | 50.000 | 20.67 | 2.86 | 0.00 | 4.45 |
765 | 807 | 2.270986 | GGAGTGGCAGTTTGGGCAG | 61.271 | 63.158 | 0.00 | 0.00 | 44.63 | 4.85 |
792 | 834 | 3.126001 | TGGAAACACTAGTCTTGCTGG | 57.874 | 47.619 | 0.00 | 0.00 | 33.40 | 4.85 |
793 | 835 | 2.438021 | TGGAAACACTAGTCTTGCTGGT | 59.562 | 45.455 | 0.00 | 0.00 | 39.65 | 4.00 |
795 | 837 | 4.101898 | TGGAAACACTAGTCTTGCTGGTAA | 59.898 | 41.667 | 0.00 | 0.00 | 36.75 | 2.85 |
796 | 838 | 4.451435 | GGAAACACTAGTCTTGCTGGTAAC | 59.549 | 45.833 | 0.00 | 0.00 | 36.75 | 2.50 |
797 | 839 | 4.957684 | AACACTAGTCTTGCTGGTAACT | 57.042 | 40.909 | 0.00 | 0.00 | 36.75 | 2.24 |
798 | 840 | 4.258702 | ACACTAGTCTTGCTGGTAACTG | 57.741 | 45.455 | 0.00 | 0.00 | 36.75 | 3.16 |
826 | 868 | 3.705604 | AGTTTGCCAAGTGTCAAAATCG | 58.294 | 40.909 | 0.00 | 0.00 | 34.44 | 3.34 |
849 | 894 | 6.531594 | TCGTATCTCAACTACAGAATGCAAAG | 59.468 | 38.462 | 0.00 | 0.00 | 42.53 | 2.77 |
851 | 896 | 6.981762 | ATCTCAACTACAGAATGCAAAGAG | 57.018 | 37.500 | 0.00 | 0.00 | 42.53 | 2.85 |
862 | 907 | 0.610174 | TGCAAAGAGAGGATGCTCGT | 59.390 | 50.000 | 8.74 | 0.00 | 40.66 | 4.18 |
868 | 913 | 1.379977 | AGAGGATGCTCGTCGGGAA | 60.380 | 57.895 | 8.74 | 0.00 | 36.48 | 3.97 |
876 | 921 | 1.214589 | CTCGTCGGGAAATGTCGGT | 59.785 | 57.895 | 0.00 | 0.00 | 0.00 | 4.69 |
889 | 934 | 1.686355 | TGTCGGTTTGCATGGTTTCT | 58.314 | 45.000 | 0.00 | 0.00 | 0.00 | 2.52 |
915 | 961 | 6.916387 | GTCATTTTGTCATCAGATATGGCTTG | 59.084 | 38.462 | 0.00 | 0.00 | 0.00 | 4.01 |
916 | 962 | 5.840243 | TTTTGTCATCAGATATGGCTTGG | 57.160 | 39.130 | 0.00 | 0.00 | 0.00 | 3.61 |
920 | 966 | 4.202295 | TGTCATCAGATATGGCTTGGAGTC | 60.202 | 45.833 | 0.00 | 0.00 | 0.00 | 3.36 |
1006 | 1052 | 1.318158 | CCTTTGCCAGAGGATGCCAC | 61.318 | 60.000 | 0.00 | 0.00 | 36.33 | 5.01 |
1031 | 1077 | 7.016153 | TCATTAAGGTTTGCTCTTTCCTCTA | 57.984 | 36.000 | 0.00 | 0.00 | 0.00 | 2.43 |
1036 | 1082 | 4.348168 | AGGTTTGCTCTTTCCTCTAGACAA | 59.652 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
1041 | 1087 | 6.798427 | TGCTCTTTCCTCTAGACAATATGT | 57.202 | 37.500 | 0.00 | 0.00 | 0.00 | 2.29 |
1066 | 1114 | 7.575414 | TTTTTCAAGCAGTGTATGTTTCCTA | 57.425 | 32.000 | 0.00 | 0.00 | 28.53 | 2.94 |
1075 | 1123 | 7.503566 | AGCAGTGTATGTTTCCTAATGCATAAT | 59.496 | 33.333 | 0.00 | 0.00 | 33.69 | 1.28 |
1131 | 1187 | 1.068748 | GCATTTCTGACCACTGCACTG | 60.069 | 52.381 | 0.00 | 0.00 | 33.13 | 3.66 |
1138 | 1194 | 1.072173 | TGACCACTGCACTGTAATGCT | 59.928 | 47.619 | 0.00 | 0.00 | 46.28 | 3.79 |
1171 | 1227 | 0.034670 | GCAGAGCCTCCTCCAAATGT | 60.035 | 55.000 | 0.00 | 0.00 | 38.96 | 2.71 |
1273 | 1333 | 7.119262 | GCTCTGGCTAGTTATCAAAGTTTGTAA | 59.881 | 37.037 | 15.08 | 10.11 | 35.22 | 2.41 |
1274 | 1334 | 8.319143 | TCTGGCTAGTTATCAAAGTTTGTAAC | 57.681 | 34.615 | 21.17 | 21.17 | 32.40 | 2.50 |
1275 | 1335 | 8.154856 | TCTGGCTAGTTATCAAAGTTTGTAACT | 58.845 | 33.333 | 27.51 | 27.51 | 45.46 | 2.24 |
1276 | 1336 | 8.094798 | TGGCTAGTTATCAAAGTTTGTAACTG | 57.905 | 34.615 | 29.64 | 24.12 | 41.91 | 3.16 |
1277 | 1337 | 7.717875 | TGGCTAGTTATCAAAGTTTGTAACTGT | 59.282 | 33.333 | 29.64 | 19.05 | 41.91 | 3.55 |
1278 | 1338 | 8.015658 | GGCTAGTTATCAAAGTTTGTAACTGTG | 58.984 | 37.037 | 29.64 | 25.24 | 46.12 | 3.66 |
1279 | 1339 | 7.534239 | GCTAGTTATCAAAGTTTGTAACTGTGC | 59.466 | 37.037 | 29.64 | 27.87 | 44.71 | 4.57 |
1280 | 1340 | 6.735130 | AGTTATCAAAGTTTGTAACTGTGCC | 58.265 | 36.000 | 25.84 | 10.98 | 44.71 | 5.01 |
1281 | 1341 | 4.584327 | ATCAAAGTTTGTAACTGTGCCC | 57.416 | 40.909 | 15.08 | 0.00 | 44.71 | 5.36 |
1282 | 1342 | 2.691011 | TCAAAGTTTGTAACTGTGCCCC | 59.309 | 45.455 | 15.08 | 0.00 | 44.71 | 5.80 |
1283 | 1343 | 1.699730 | AAGTTTGTAACTGTGCCCCC | 58.300 | 50.000 | 0.00 | 0.00 | 41.91 | 5.40 |
1284 | 1344 | 0.536460 | AGTTTGTAACTGTGCCCCCG | 60.536 | 55.000 | 0.00 | 0.00 | 41.01 | 5.73 |
1285 | 1345 | 1.899534 | TTTGTAACTGTGCCCCCGC | 60.900 | 57.895 | 0.00 | 0.00 | 0.00 | 6.13 |
1286 | 1346 | 2.626255 | TTTGTAACTGTGCCCCCGCA | 62.626 | 55.000 | 0.00 | 0.00 | 44.78 | 5.69 |
1454 | 3046 | 2.109834 | TGGTGGTGGTCCATTCATCTTT | 59.890 | 45.455 | 0.00 | 0.00 | 46.20 | 2.52 |
1509 | 3101 | 3.485463 | TTAAATGAGAGCGGGTATGGG | 57.515 | 47.619 | 0.00 | 0.00 | 0.00 | 4.00 |
1517 | 3109 | 2.775384 | AGAGCGGGTATGGGTGAATTTA | 59.225 | 45.455 | 0.00 | 0.00 | 0.00 | 1.40 |
1537 | 3129 | 3.641434 | AGCTCAGCCAAATGATAGTGT | 57.359 | 42.857 | 0.00 | 0.00 | 0.00 | 3.55 |
1573 | 3170 | 4.888326 | ACATTGTTGCATGGGTATTGTT | 57.112 | 36.364 | 0.00 | 0.00 | 0.00 | 2.83 |
1588 | 3185 | 9.780186 | ATGGGTATTGTTCTATTAGCTTTAGAC | 57.220 | 33.333 | 0.00 | 0.00 | 0.00 | 2.59 |
1596 | 3193 | 8.540388 | TGTTCTATTAGCTTTAGACAGTTGGAT | 58.460 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
1603 | 3200 | 7.736447 | AGCTTTAGACAGTTGGATATTATGC | 57.264 | 36.000 | 0.00 | 0.00 | 0.00 | 3.14 |
1609 | 3206 | 7.559335 | AGACAGTTGGATATTATGCCTATGA | 57.441 | 36.000 | 0.00 | 0.00 | 0.00 | 2.15 |
1610 | 3207 | 8.155620 | AGACAGTTGGATATTATGCCTATGAT | 57.844 | 34.615 | 0.00 | 0.00 | 0.00 | 2.45 |
1611 | 3208 | 8.045507 | AGACAGTTGGATATTATGCCTATGATG | 58.954 | 37.037 | 0.00 | 0.00 | 0.00 | 3.07 |
1612 | 3209 | 6.600822 | ACAGTTGGATATTATGCCTATGATGC | 59.399 | 38.462 | 0.00 | 0.00 | 0.00 | 3.91 |
1615 | 3212 | 6.077202 | TGGATATTATGCCTATGATGCCAA | 57.923 | 37.500 | 0.00 | 0.00 | 0.00 | 4.52 |
1616 | 3213 | 6.492274 | TGGATATTATGCCTATGATGCCAAA | 58.508 | 36.000 | 0.00 | 0.00 | 0.00 | 3.28 |
1619 | 3216 | 7.069085 | GGATATTATGCCTATGATGCCAAACAT | 59.931 | 37.037 | 0.00 | 0.00 | 43.54 | 2.71 |
1620 | 3217 | 5.456548 | TTATGCCTATGATGCCAAACATG | 57.543 | 39.130 | 0.00 | 0.00 | 39.84 | 3.21 |
1621 | 3218 | 2.033372 | TGCCTATGATGCCAAACATGG | 58.967 | 47.619 | 0.00 | 0.00 | 39.84 | 3.66 |
1623 | 3220 | 2.669781 | CCTATGATGCCAAACATGGGT | 58.330 | 47.619 | 0.00 | 0.00 | 39.84 | 4.51 |
1624 | 3221 | 3.831323 | CCTATGATGCCAAACATGGGTA | 58.169 | 45.455 | 0.00 | 0.00 | 39.84 | 3.69 |
1625 | 3222 | 4.410099 | CCTATGATGCCAAACATGGGTAT | 58.590 | 43.478 | 0.00 | 0.00 | 39.84 | 2.73 |
1626 | 3223 | 4.834496 | CCTATGATGCCAAACATGGGTATT | 59.166 | 41.667 | 0.00 | 0.00 | 39.84 | 1.89 |
1627 | 3224 | 4.675976 | ATGATGCCAAACATGGGTATTG | 57.324 | 40.909 | 0.00 | 0.00 | 39.84 | 1.90 |
1628 | 3225 | 3.439154 | TGATGCCAAACATGGGTATTGT | 58.561 | 40.909 | 0.00 | 0.00 | 39.84 | 2.71 |
1629 | 3226 | 3.837146 | TGATGCCAAACATGGGTATTGTT | 59.163 | 39.130 | 0.00 | 0.00 | 39.84 | 2.83 |
1630 | 3227 | 3.951775 | TGCCAAACATGGGTATTGTTC | 57.048 | 42.857 | 0.00 | 0.00 | 36.32 | 3.18 |
1701 | 3298 | 8.404000 | GTTCATTCATTCTTCTGCATGTTATCT | 58.596 | 33.333 | 0.00 | 0.00 | 0.00 | 1.98 |
1963 | 3567 | 6.545298 | GGCAATATGAACTTCTCAAGATTCCT | 59.455 | 38.462 | 0.00 | 0.00 | 37.67 | 3.36 |
2054 | 3664 | 9.206870 | ACAAATGTGTGCATATTTCCTTAAAAG | 57.793 | 29.630 | 4.32 | 0.00 | 36.31 | 2.27 |
2055 | 3665 | 8.658609 | CAAATGTGTGCATATTTCCTTAAAAGG | 58.341 | 33.333 | 2.09 | 2.09 | 40.02 | 3.11 |
2067 | 3683 | 8.651589 | ATTTCCTTAAAAGGGAAGTTTAGGAG | 57.348 | 34.615 | 8.43 | 0.00 | 46.59 | 3.69 |
2076 | 3692 | 2.306219 | GGAAGTTTAGGAGACTGCCCTT | 59.694 | 50.000 | 0.00 | 0.00 | 43.88 | 3.95 |
2210 | 3826 | 3.943381 | GTGATCAGCATCAAGTCCATTCA | 59.057 | 43.478 | 0.00 | 0.00 | 40.90 | 2.57 |
2285 | 3901 | 3.274288 | GTTTAGCATCAAGGCTGTAGCT | 58.726 | 45.455 | 3.63 | 8.65 | 45.44 | 3.32 |
2359 | 3975 | 6.327386 | TGTGAGGGCTAAAATTCTCCTAAT | 57.673 | 37.500 | 0.00 | 0.00 | 0.00 | 1.73 |
2536 | 4152 | 4.340381 | GGAATTGCTCTTGCTGGAATGTAT | 59.660 | 41.667 | 0.00 | 0.00 | 40.48 | 2.29 |
2541 | 4157 | 6.194796 | TGCTCTTGCTGGAATGTATTTAAC | 57.805 | 37.500 | 0.00 | 0.00 | 40.48 | 2.01 |
2560 | 4176 | 4.935352 | AACTGTTGCATGCTTAAGGAAA | 57.065 | 36.364 | 20.33 | 0.00 | 0.00 | 3.13 |
2723 | 4339 | 0.242555 | TATGACGCGTTGCTCACAGA | 59.757 | 50.000 | 15.53 | 0.00 | 0.00 | 3.41 |
2793 | 4409 | 8.974060 | ATTATATCGTGGTTGGTAGTTTGATT | 57.026 | 30.769 | 0.00 | 0.00 | 0.00 | 2.57 |
2886 | 4502 | 7.750947 | AAACACAGTATAAGAAGGTCCCTAT | 57.249 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2895 | 4512 | 0.949582 | AAGGTCCCTATCCCCTAGCA | 59.050 | 55.000 | 0.00 | 0.00 | 0.00 | 3.49 |
2921 | 4538 | 1.378882 | ATGCGATTGTGAGCGGCATT | 61.379 | 50.000 | 1.45 | 0.00 | 34.72 | 3.56 |
2937 | 4554 | 1.198178 | GCATTACGGAAAAGCACGGAA | 59.802 | 47.619 | 3.52 | 0.00 | 37.33 | 4.30 |
2938 | 4555 | 2.350964 | GCATTACGGAAAAGCACGGAAA | 60.351 | 45.455 | 3.52 | 0.00 | 36.39 | 3.13 |
2947 | 4564 | 2.891191 | AAGCACGGAAAAATAGGGGA | 57.109 | 45.000 | 0.00 | 0.00 | 0.00 | 4.81 |
2984 | 4601 | 6.851222 | ATTTCTAACATTGGTATCAGAGCG | 57.149 | 37.500 | 0.00 | 0.00 | 0.00 | 5.03 |
3002 | 4619 | 2.234414 | AGCGGATTAGGGTTAACGACAA | 59.766 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
3039 | 4657 | 5.229921 | GATTCGATCGGAAAACAATTCCA | 57.770 | 39.130 | 16.41 | 0.00 | 38.36 | 3.53 |
3054 | 4672 | 0.679505 | TTCCACTGCGTACTCTGCTT | 59.320 | 50.000 | 0.00 | 0.00 | 0.00 | 3.91 |
3068 | 4686 | 3.243907 | ACTCTGCTTGTGGTCAACTAGTC | 60.244 | 47.826 | 0.00 | 0.00 | 34.50 | 2.59 |
3069 | 4687 | 2.061773 | CTGCTTGTGGTCAACTAGTCG | 58.938 | 52.381 | 0.00 | 0.00 | 34.50 | 4.18 |
3070 | 4688 | 0.790814 | GCTTGTGGTCAACTAGTCGC | 59.209 | 55.000 | 0.00 | 0.00 | 34.50 | 5.19 |
3071 | 4689 | 1.605712 | GCTTGTGGTCAACTAGTCGCT | 60.606 | 52.381 | 0.00 | 0.00 | 34.50 | 4.93 |
3072 | 4690 | 2.329379 | CTTGTGGTCAACTAGTCGCTC | 58.671 | 52.381 | 0.00 | 0.00 | 0.00 | 5.03 |
3104 | 4723 | 6.018425 | CCAACTTGGATTAGATTGATCTCGTG | 60.018 | 42.308 | 0.92 | 0.00 | 40.96 | 4.35 |
3106 | 4725 | 6.045318 | ACTTGGATTAGATTGATCTCGTGTG | 58.955 | 40.000 | 0.00 | 0.00 | 38.32 | 3.82 |
3145 | 4773 | 3.085443 | TCGCTCCAGATCGATTTTCTC | 57.915 | 47.619 | 0.00 | 0.00 | 0.00 | 2.87 |
3154 | 4782 | 3.330766 | CGATTTTCTCGTCTCGCCT | 57.669 | 52.632 | 0.00 | 0.00 | 42.56 | 5.52 |
3169 | 4800 | 4.493747 | CCTCGCCGTTCCCGTCTC | 62.494 | 72.222 | 0.00 | 0.00 | 0.00 | 3.36 |
3195 | 4826 | 4.664677 | GCACTGTCGTCCTGCCGT | 62.665 | 66.667 | 0.00 | 0.00 | 0.00 | 5.68 |
3196 | 4827 | 2.734723 | CACTGTCGTCCTGCCGTG | 60.735 | 66.667 | 0.00 | 0.00 | 0.00 | 4.94 |
3197 | 4828 | 4.664677 | ACTGTCGTCCTGCCGTGC | 62.665 | 66.667 | 0.00 | 0.00 | 0.00 | 5.34 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
13 | 14 | 1.134037 | GTGGTGGTTTGGTACAGGACA | 60.134 | 52.381 | 0.00 | 0.00 | 42.39 | 4.02 |
85 | 115 | 0.246910 | GGAGGGACGAGGTTTCTCAC | 59.753 | 60.000 | 0.00 | 0.00 | 39.95 | 3.51 |
86 | 116 | 0.903454 | GGGAGGGACGAGGTTTCTCA | 60.903 | 60.000 | 0.00 | 0.00 | 39.95 | 3.27 |
127 | 157 | 3.489513 | GGGGAATGGACCGAGGGG | 61.490 | 72.222 | 0.00 | 0.00 | 40.11 | 4.79 |
128 | 158 | 1.571773 | AAAGGGGAATGGACCGAGGG | 61.572 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
129 | 159 | 0.331616 | AAAAGGGGAATGGACCGAGG | 59.668 | 55.000 | 0.00 | 0.00 | 0.00 | 4.63 |
144 | 174 | 1.271379 | GTTTCCCCGCCACCTAAAAAG | 59.729 | 52.381 | 0.00 | 0.00 | 0.00 | 2.27 |
150 | 180 | 3.647771 | GAGGTTTCCCCGCCACCT | 61.648 | 66.667 | 0.00 | 0.00 | 44.05 | 4.00 |
161 | 191 | 4.436998 | CGGAGGCGCTCGAGGTTT | 62.437 | 66.667 | 15.58 | 0.00 | 0.00 | 3.27 |
226 | 258 | 1.127582 | CGAAGCAGTGCAGTTTAGCTC | 59.872 | 52.381 | 19.20 | 0.00 | 33.83 | 4.09 |
235 | 267 | 1.089112 | CATCAATCCGAAGCAGTGCA | 58.911 | 50.000 | 19.20 | 0.00 | 0.00 | 4.57 |
236 | 268 | 1.089920 | ACATCAATCCGAAGCAGTGC | 58.910 | 50.000 | 7.13 | 7.13 | 0.00 | 4.40 |
270 | 302 | 0.922243 | ATACCCCCAACGAACCCCAT | 60.922 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
272 | 304 | 1.077285 | CATACCCCCAACGAACCCC | 60.077 | 63.158 | 0.00 | 0.00 | 0.00 | 4.95 |
274 | 306 | 1.476291 | GGATCATACCCCCAACGAACC | 60.476 | 57.143 | 0.00 | 0.00 | 0.00 | 3.62 |
279 | 311 | 2.635915 | TGTATCGGATCATACCCCCAAC | 59.364 | 50.000 | 0.00 | 0.00 | 0.00 | 3.77 |
281 | 313 | 2.158219 | ACTGTATCGGATCATACCCCCA | 60.158 | 50.000 | 0.00 | 0.00 | 0.00 | 4.96 |
296 | 328 | 5.470098 | AGCAATCAACGAAAACTGACTGTAT | 59.530 | 36.000 | 0.00 | 0.00 | 0.00 | 2.29 |
299 | 331 | 4.024556 | AGAGCAATCAACGAAAACTGACTG | 60.025 | 41.667 | 0.00 | 0.00 | 0.00 | 3.51 |
300 | 332 | 4.130118 | AGAGCAATCAACGAAAACTGACT | 58.870 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
301 | 333 | 4.474226 | AGAGCAATCAACGAAAACTGAC | 57.526 | 40.909 | 0.00 | 0.00 | 0.00 | 3.51 |
303 | 335 | 4.149922 | TCGTAGAGCAATCAACGAAAACTG | 59.850 | 41.667 | 0.00 | 0.00 | 41.01 | 3.16 |
305 | 337 | 4.640805 | TCGTAGAGCAATCAACGAAAAC | 57.359 | 40.909 | 0.00 | 0.00 | 41.01 | 2.43 |
341 | 373 | 4.762765 | TCTAGGGCACGCAATTAAGAAAAA | 59.237 | 37.500 | 0.00 | 0.00 | 0.00 | 1.94 |
342 | 374 | 4.328536 | TCTAGGGCACGCAATTAAGAAAA | 58.671 | 39.130 | 0.00 | 0.00 | 0.00 | 2.29 |
343 | 375 | 3.945346 | TCTAGGGCACGCAATTAAGAAA | 58.055 | 40.909 | 0.00 | 0.00 | 0.00 | 2.52 |
344 | 376 | 3.620427 | TCTAGGGCACGCAATTAAGAA | 57.380 | 42.857 | 0.00 | 0.00 | 0.00 | 2.52 |
345 | 377 | 3.620427 | TTCTAGGGCACGCAATTAAGA | 57.380 | 42.857 | 0.00 | 0.00 | 0.00 | 2.10 |
346 | 378 | 4.156008 | ACTTTTCTAGGGCACGCAATTAAG | 59.844 | 41.667 | 0.00 | 0.00 | 0.00 | 1.85 |
347 | 379 | 4.076394 | ACTTTTCTAGGGCACGCAATTAA | 58.924 | 39.130 | 0.00 | 0.00 | 0.00 | 1.40 |
348 | 380 | 3.681593 | ACTTTTCTAGGGCACGCAATTA | 58.318 | 40.909 | 0.00 | 0.00 | 0.00 | 1.40 |
349 | 381 | 2.514803 | ACTTTTCTAGGGCACGCAATT | 58.485 | 42.857 | 0.00 | 0.00 | 0.00 | 2.32 |
350 | 382 | 2.200373 | ACTTTTCTAGGGCACGCAAT | 57.800 | 45.000 | 0.00 | 0.00 | 0.00 | 3.56 |
351 | 383 | 1.975660 | AACTTTTCTAGGGCACGCAA | 58.024 | 45.000 | 0.00 | 0.00 | 0.00 | 4.85 |
352 | 384 | 1.975660 | AAACTTTTCTAGGGCACGCA | 58.024 | 45.000 | 0.00 | 0.00 | 0.00 | 5.24 |
353 | 385 | 2.809696 | TGTAAACTTTTCTAGGGCACGC | 59.190 | 45.455 | 0.00 | 0.00 | 0.00 | 5.34 |
354 | 386 | 3.435671 | CCTGTAAACTTTTCTAGGGCACG | 59.564 | 47.826 | 0.00 | 0.00 | 0.00 | 5.34 |
355 | 387 | 4.395625 | ACCTGTAAACTTTTCTAGGGCAC | 58.604 | 43.478 | 0.00 | 0.00 | 31.43 | 5.01 |
356 | 388 | 4.717279 | ACCTGTAAACTTTTCTAGGGCA | 57.283 | 40.909 | 0.00 | 0.00 | 31.43 | 5.36 |
357 | 389 | 5.334646 | CGAAACCTGTAAACTTTTCTAGGGC | 60.335 | 44.000 | 0.00 | 0.00 | 31.43 | 5.19 |
358 | 390 | 5.993441 | TCGAAACCTGTAAACTTTTCTAGGG | 59.007 | 40.000 | 0.00 | 0.00 | 31.43 | 3.53 |
359 | 391 | 7.668525 | ATCGAAACCTGTAAACTTTTCTAGG | 57.331 | 36.000 | 0.00 | 0.00 | 32.66 | 3.02 |
360 | 392 | 8.770828 | TGAATCGAAACCTGTAAACTTTTCTAG | 58.229 | 33.333 | 0.00 | 0.00 | 0.00 | 2.43 |
361 | 393 | 8.665643 | TGAATCGAAACCTGTAAACTTTTCTA | 57.334 | 30.769 | 0.00 | 0.00 | 0.00 | 2.10 |
362 | 394 | 7.497909 | TCTGAATCGAAACCTGTAAACTTTTCT | 59.502 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
363 | 395 | 7.636326 | TCTGAATCGAAACCTGTAAACTTTTC | 58.364 | 34.615 | 0.00 | 0.00 | 0.00 | 2.29 |
364 | 396 | 7.562454 | TCTGAATCGAAACCTGTAAACTTTT | 57.438 | 32.000 | 0.00 | 0.00 | 0.00 | 2.27 |
365 | 397 | 7.745620 | ATCTGAATCGAAACCTGTAAACTTT | 57.254 | 32.000 | 0.00 | 0.00 | 0.00 | 2.66 |
366 | 398 | 7.745620 | AATCTGAATCGAAACCTGTAAACTT | 57.254 | 32.000 | 0.00 | 0.00 | 0.00 | 2.66 |
367 | 399 | 8.842358 | TTAATCTGAATCGAAACCTGTAAACT | 57.158 | 30.769 | 0.00 | 0.00 | 0.00 | 2.66 |
368 | 400 | 9.887406 | TTTTAATCTGAATCGAAACCTGTAAAC | 57.113 | 29.630 | 0.00 | 0.00 | 0.00 | 2.01 |
370 | 402 | 8.726988 | CCTTTTAATCTGAATCGAAACCTGTAA | 58.273 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
371 | 403 | 7.881232 | ACCTTTTAATCTGAATCGAAACCTGTA | 59.119 | 33.333 | 0.00 | 0.00 | 0.00 | 2.74 |
372 | 404 | 6.715264 | ACCTTTTAATCTGAATCGAAACCTGT | 59.285 | 34.615 | 0.00 | 0.00 | 0.00 | 4.00 |
373 | 405 | 7.023575 | CACCTTTTAATCTGAATCGAAACCTG | 58.976 | 38.462 | 0.00 | 0.00 | 0.00 | 4.00 |
374 | 406 | 6.151144 | CCACCTTTTAATCTGAATCGAAACCT | 59.849 | 38.462 | 0.00 | 0.00 | 0.00 | 3.50 |
375 | 407 | 6.072119 | ACCACCTTTTAATCTGAATCGAAACC | 60.072 | 38.462 | 0.00 | 0.00 | 0.00 | 3.27 |
376 | 408 | 6.801862 | CACCACCTTTTAATCTGAATCGAAAC | 59.198 | 38.462 | 0.00 | 0.00 | 0.00 | 2.78 |
377 | 409 | 6.712998 | TCACCACCTTTTAATCTGAATCGAAA | 59.287 | 34.615 | 0.00 | 0.00 | 0.00 | 3.46 |
378 | 410 | 6.234920 | TCACCACCTTTTAATCTGAATCGAA | 58.765 | 36.000 | 0.00 | 0.00 | 0.00 | 3.71 |
379 | 411 | 5.800296 | TCACCACCTTTTAATCTGAATCGA | 58.200 | 37.500 | 0.00 | 0.00 | 0.00 | 3.59 |
380 | 412 | 6.683974 | ATCACCACCTTTTAATCTGAATCG | 57.316 | 37.500 | 0.00 | 0.00 | 0.00 | 3.34 |
381 | 413 | 9.178758 | AGTAATCACCACCTTTTAATCTGAATC | 57.821 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
383 | 415 | 9.667107 | CTAGTAATCACCACCTTTTAATCTGAA | 57.333 | 33.333 | 0.00 | 0.00 | 0.00 | 3.02 |
384 | 416 | 9.042450 | TCTAGTAATCACCACCTTTTAATCTGA | 57.958 | 33.333 | 0.00 | 0.00 | 0.00 | 3.27 |
385 | 417 | 9.667107 | TTCTAGTAATCACCACCTTTTAATCTG | 57.333 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
386 | 418 | 9.892130 | CTTCTAGTAATCACCACCTTTTAATCT | 57.108 | 33.333 | 0.00 | 0.00 | 0.00 | 2.40 |
387 | 419 | 9.110502 | CCTTCTAGTAATCACCACCTTTTAATC | 57.889 | 37.037 | 0.00 | 0.00 | 0.00 | 1.75 |
388 | 420 | 8.612145 | ACCTTCTAGTAATCACCACCTTTTAAT | 58.388 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
389 | 421 | 7.981142 | ACCTTCTAGTAATCACCACCTTTTAA | 58.019 | 34.615 | 0.00 | 0.00 | 0.00 | 1.52 |
390 | 422 | 7.563724 | ACCTTCTAGTAATCACCACCTTTTA | 57.436 | 36.000 | 0.00 | 0.00 | 0.00 | 1.52 |
391 | 423 | 6.449830 | ACCTTCTAGTAATCACCACCTTTT | 57.550 | 37.500 | 0.00 | 0.00 | 0.00 | 2.27 |
392 | 424 | 6.070366 | GGTACCTTCTAGTAATCACCACCTTT | 60.070 | 42.308 | 4.06 | 0.00 | 0.00 | 3.11 |
393 | 425 | 5.424573 | GGTACCTTCTAGTAATCACCACCTT | 59.575 | 44.000 | 4.06 | 0.00 | 0.00 | 3.50 |
394 | 426 | 4.961099 | GGTACCTTCTAGTAATCACCACCT | 59.039 | 45.833 | 4.06 | 0.00 | 0.00 | 4.00 |
395 | 427 | 5.273674 | GGTACCTTCTAGTAATCACCACC | 57.726 | 47.826 | 4.06 | 0.00 | 0.00 | 4.61 |
448 | 480 | 9.516314 | CGTATGAGTAGATTGATTTGTAGACAA | 57.484 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
449 | 481 | 8.683615 | ACGTATGAGTAGATTGATTTGTAGACA | 58.316 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
450 | 482 | 9.517609 | AACGTATGAGTAGATTGATTTGTAGAC | 57.482 | 33.333 | 0.00 | 0.00 | 0.00 | 2.59 |
453 | 485 | 8.600625 | GCAAACGTATGAGTAGATTGATTTGTA | 58.399 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
454 | 486 | 7.119116 | TGCAAACGTATGAGTAGATTGATTTGT | 59.881 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
455 | 487 | 7.463544 | TGCAAACGTATGAGTAGATTGATTTG | 58.536 | 34.615 | 0.00 | 0.00 | 0.00 | 2.32 |
456 | 488 | 7.201644 | CCTGCAAACGTATGAGTAGATTGATTT | 60.202 | 37.037 | 0.00 | 0.00 | 0.00 | 2.17 |
457 | 489 | 6.258727 | CCTGCAAACGTATGAGTAGATTGATT | 59.741 | 38.462 | 0.00 | 0.00 | 0.00 | 2.57 |
458 | 490 | 5.755375 | CCTGCAAACGTATGAGTAGATTGAT | 59.245 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
459 | 491 | 5.109210 | CCTGCAAACGTATGAGTAGATTGA | 58.891 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
460 | 492 | 4.260375 | GCCTGCAAACGTATGAGTAGATTG | 60.260 | 45.833 | 0.00 | 0.00 | 0.00 | 2.67 |
461 | 493 | 3.871594 | GCCTGCAAACGTATGAGTAGATT | 59.128 | 43.478 | 0.00 | 0.00 | 0.00 | 2.40 |
462 | 494 | 3.133003 | AGCCTGCAAACGTATGAGTAGAT | 59.867 | 43.478 | 0.00 | 0.00 | 0.00 | 1.98 |
463 | 495 | 2.496070 | AGCCTGCAAACGTATGAGTAGA | 59.504 | 45.455 | 0.00 | 0.00 | 0.00 | 2.59 |
464 | 496 | 2.893637 | AGCCTGCAAACGTATGAGTAG | 58.106 | 47.619 | 0.00 | 0.00 | 0.00 | 2.57 |
465 | 497 | 4.459390 | TTAGCCTGCAAACGTATGAGTA | 57.541 | 40.909 | 0.00 | 0.00 | 0.00 | 2.59 |
466 | 498 | 3.328382 | TTAGCCTGCAAACGTATGAGT | 57.672 | 42.857 | 0.00 | 0.00 | 0.00 | 3.41 |
467 | 499 | 5.696270 | TCATATTAGCCTGCAAACGTATGAG | 59.304 | 40.000 | 0.00 | 0.00 | 0.00 | 2.90 |
468 | 500 | 5.465390 | GTCATATTAGCCTGCAAACGTATGA | 59.535 | 40.000 | 0.00 | 0.00 | 0.00 | 2.15 |
469 | 501 | 5.612492 | CGTCATATTAGCCTGCAAACGTATG | 60.612 | 44.000 | 0.00 | 0.00 | 0.00 | 2.39 |
470 | 502 | 4.447724 | CGTCATATTAGCCTGCAAACGTAT | 59.552 | 41.667 | 0.00 | 0.00 | 0.00 | 3.06 |
471 | 503 | 3.799963 | CGTCATATTAGCCTGCAAACGTA | 59.200 | 43.478 | 0.00 | 0.00 | 0.00 | 3.57 |
472 | 504 | 2.607635 | CGTCATATTAGCCTGCAAACGT | 59.392 | 45.455 | 0.00 | 0.00 | 0.00 | 3.99 |
473 | 505 | 2.863740 | TCGTCATATTAGCCTGCAAACG | 59.136 | 45.455 | 0.00 | 0.00 | 0.00 | 3.60 |
474 | 506 | 6.363473 | GTTATCGTCATATTAGCCTGCAAAC | 58.637 | 40.000 | 0.00 | 0.00 | 0.00 | 2.93 |
475 | 507 | 5.468746 | GGTTATCGTCATATTAGCCTGCAAA | 59.531 | 40.000 | 0.00 | 0.00 | 0.00 | 3.68 |
476 | 508 | 4.994852 | GGTTATCGTCATATTAGCCTGCAA | 59.005 | 41.667 | 0.00 | 0.00 | 0.00 | 4.08 |
477 | 509 | 4.283467 | AGGTTATCGTCATATTAGCCTGCA | 59.717 | 41.667 | 0.00 | 0.00 | 0.00 | 4.41 |
478 | 510 | 4.822026 | AGGTTATCGTCATATTAGCCTGC | 58.178 | 43.478 | 0.00 | 0.00 | 0.00 | 4.85 |
479 | 511 | 7.730364 | AAAAGGTTATCGTCATATTAGCCTG | 57.270 | 36.000 | 0.00 | 0.00 | 0.00 | 4.85 |
480 | 512 | 9.841295 | TTTAAAAGGTTATCGTCATATTAGCCT | 57.159 | 29.630 | 0.00 | 0.00 | 0.00 | 4.58 |
515 | 547 | 9.657419 | CCCTTTAAAAGTTTGCATGAATCTTAT | 57.343 | 29.630 | 0.00 | 0.00 | 0.00 | 1.73 |
516 | 548 | 8.093927 | CCCCTTTAAAAGTTTGCATGAATCTTA | 58.906 | 33.333 | 0.00 | 0.00 | 0.00 | 2.10 |
517 | 549 | 6.936335 | CCCCTTTAAAAGTTTGCATGAATCTT | 59.064 | 34.615 | 0.00 | 0.00 | 0.00 | 2.40 |
518 | 550 | 6.043127 | ACCCCTTTAAAAGTTTGCATGAATCT | 59.957 | 34.615 | 0.00 | 0.00 | 0.00 | 2.40 |
519 | 551 | 6.230472 | ACCCCTTTAAAAGTTTGCATGAATC | 58.770 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
520 | 552 | 6.186420 | ACCCCTTTAAAAGTTTGCATGAAT | 57.814 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
521 | 553 | 5.622346 | ACCCCTTTAAAAGTTTGCATGAA | 57.378 | 34.783 | 0.00 | 0.00 | 0.00 | 2.57 |
522 | 554 | 5.104735 | ACAACCCCTTTAAAAGTTTGCATGA | 60.105 | 36.000 | 0.00 | 0.00 | 0.00 | 3.07 |
523 | 555 | 5.122519 | ACAACCCCTTTAAAAGTTTGCATG | 58.877 | 37.500 | 0.00 | 0.00 | 0.00 | 4.06 |
524 | 556 | 5.366482 | ACAACCCCTTTAAAAGTTTGCAT | 57.634 | 34.783 | 0.00 | 0.00 | 0.00 | 3.96 |
525 | 557 | 4.828072 | ACAACCCCTTTAAAAGTTTGCA | 57.172 | 36.364 | 0.00 | 0.00 | 0.00 | 4.08 |
526 | 558 | 5.051816 | GGTACAACCCCTTTAAAAGTTTGC | 58.948 | 41.667 | 0.00 | 0.00 | 30.04 | 3.68 |
527 | 559 | 6.223351 | TGGTACAACCCCTTTAAAAGTTTG | 57.777 | 37.500 | 0.00 | 0.00 | 37.50 | 2.93 |
544 | 576 | 0.248134 | GTGTTTTGCGCGTTGGTACA | 60.248 | 50.000 | 8.43 | 3.48 | 0.00 | 2.90 |
545 | 577 | 0.028374 | AGTGTTTTGCGCGTTGGTAC | 59.972 | 50.000 | 8.43 | 0.48 | 0.00 | 3.34 |
546 | 578 | 0.733729 | AAGTGTTTTGCGCGTTGGTA | 59.266 | 45.000 | 8.43 | 0.00 | 0.00 | 3.25 |
547 | 579 | 0.800300 | CAAGTGTTTTGCGCGTTGGT | 60.800 | 50.000 | 8.43 | 0.00 | 0.00 | 3.67 |
548 | 580 | 1.916505 | CAAGTGTTTTGCGCGTTGG | 59.083 | 52.632 | 8.43 | 0.00 | 0.00 | 3.77 |
549 | 581 | 1.269522 | GCAAGTGTTTTGCGCGTTG | 59.730 | 52.632 | 8.43 | 2.36 | 35.58 | 4.10 |
550 | 582 | 3.686863 | GCAAGTGTTTTGCGCGTT | 58.313 | 50.000 | 8.43 | 0.00 | 35.58 | 4.84 |
590 | 622 | 6.656270 | AGTCAATTTCAAGCACACATGAGATA | 59.344 | 34.615 | 0.00 | 0.00 | 0.00 | 1.98 |
591 | 623 | 5.475909 | AGTCAATTTCAAGCACACATGAGAT | 59.524 | 36.000 | 0.00 | 0.00 | 0.00 | 2.75 |
599 | 634 | 2.730069 | CGCAAGTCAATTTCAAGCACA | 58.270 | 42.857 | 0.00 | 0.00 | 0.00 | 4.57 |
622 | 657 | 6.238211 | GCTCATCAACAATCGCTACAAGTATT | 60.238 | 38.462 | 0.00 | 0.00 | 0.00 | 1.89 |
623 | 658 | 5.235186 | GCTCATCAACAATCGCTACAAGTAT | 59.765 | 40.000 | 0.00 | 0.00 | 0.00 | 2.12 |
624 | 659 | 4.566759 | GCTCATCAACAATCGCTACAAGTA | 59.433 | 41.667 | 0.00 | 0.00 | 0.00 | 2.24 |
625 | 660 | 3.372206 | GCTCATCAACAATCGCTACAAGT | 59.628 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
626 | 661 | 3.620374 | AGCTCATCAACAATCGCTACAAG | 59.380 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
627 | 662 | 3.599343 | AGCTCATCAACAATCGCTACAA | 58.401 | 40.909 | 0.00 | 0.00 | 0.00 | 2.41 |
628 | 663 | 3.251479 | AGCTCATCAACAATCGCTACA | 57.749 | 42.857 | 0.00 | 0.00 | 0.00 | 2.74 |
629 | 664 | 5.043903 | TCTTAGCTCATCAACAATCGCTAC | 58.956 | 41.667 | 0.00 | 0.00 | 30.56 | 3.58 |
630 | 665 | 5.262588 | TCTTAGCTCATCAACAATCGCTA | 57.737 | 39.130 | 0.00 | 0.00 | 0.00 | 4.26 |
631 | 666 | 4.128925 | TCTTAGCTCATCAACAATCGCT | 57.871 | 40.909 | 0.00 | 0.00 | 0.00 | 4.93 |
632 | 667 | 4.272018 | ACATCTTAGCTCATCAACAATCGC | 59.728 | 41.667 | 0.00 | 0.00 | 0.00 | 4.58 |
633 | 668 | 5.521372 | TCACATCTTAGCTCATCAACAATCG | 59.479 | 40.000 | 0.00 | 0.00 | 0.00 | 3.34 |
634 | 669 | 6.915544 | TCACATCTTAGCTCATCAACAATC | 57.084 | 37.500 | 0.00 | 0.00 | 0.00 | 2.67 |
635 | 670 | 6.183360 | GCTTCACATCTTAGCTCATCAACAAT | 60.183 | 38.462 | 0.00 | 0.00 | 32.26 | 2.71 |
636 | 671 | 5.122869 | GCTTCACATCTTAGCTCATCAACAA | 59.877 | 40.000 | 0.00 | 0.00 | 32.26 | 2.83 |
637 | 672 | 4.633126 | GCTTCACATCTTAGCTCATCAACA | 59.367 | 41.667 | 0.00 | 0.00 | 32.26 | 3.33 |
638 | 673 | 4.034975 | GGCTTCACATCTTAGCTCATCAAC | 59.965 | 45.833 | 0.00 | 0.00 | 35.30 | 3.18 |
639 | 674 | 4.194640 | GGCTTCACATCTTAGCTCATCAA | 58.805 | 43.478 | 0.00 | 0.00 | 35.30 | 2.57 |
640 | 675 | 3.198417 | TGGCTTCACATCTTAGCTCATCA | 59.802 | 43.478 | 0.00 | 0.00 | 35.30 | 3.07 |
641 | 676 | 3.801698 | TGGCTTCACATCTTAGCTCATC | 58.198 | 45.455 | 0.00 | 0.00 | 35.30 | 2.92 |
642 | 677 | 3.920231 | TGGCTTCACATCTTAGCTCAT | 57.080 | 42.857 | 0.00 | 0.00 | 35.30 | 2.90 |
643 | 678 | 3.701205 | TTGGCTTCACATCTTAGCTCA | 57.299 | 42.857 | 0.00 | 0.00 | 35.30 | 4.26 |
644 | 679 | 6.874288 | ATATTTGGCTTCACATCTTAGCTC | 57.126 | 37.500 | 0.00 | 0.00 | 35.30 | 4.09 |
645 | 680 | 7.995488 | ACTTATATTTGGCTTCACATCTTAGCT | 59.005 | 33.333 | 0.00 | 0.00 | 35.30 | 3.32 |
646 | 681 | 8.159344 | ACTTATATTTGGCTTCACATCTTAGC | 57.841 | 34.615 | 0.00 | 0.00 | 0.00 | 3.09 |
650 | 685 | 9.988815 | CTAGTACTTATATTTGGCTTCACATCT | 57.011 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
651 | 686 | 9.209175 | CCTAGTACTTATATTTGGCTTCACATC | 57.791 | 37.037 | 0.00 | 0.00 | 0.00 | 3.06 |
652 | 687 | 8.714906 | ACCTAGTACTTATATTTGGCTTCACAT | 58.285 | 33.333 | 0.00 | 0.00 | 0.00 | 3.21 |
653 | 688 | 8.086143 | ACCTAGTACTTATATTTGGCTTCACA | 57.914 | 34.615 | 0.00 | 0.00 | 0.00 | 3.58 |
674 | 709 | 9.939802 | GGTTTCACTCTTTAGAAAAGATACCTA | 57.060 | 33.333 | 2.76 | 0.00 | 35.71 | 3.08 |
675 | 710 | 7.883833 | GGGTTTCACTCTTTAGAAAAGATACCT | 59.116 | 37.037 | 2.76 | 0.00 | 35.71 | 3.08 |
676 | 711 | 7.120873 | GGGGTTTCACTCTTTAGAAAAGATACC | 59.879 | 40.741 | 2.76 | 6.11 | 35.71 | 2.73 |
677 | 712 | 7.148457 | CGGGGTTTCACTCTTTAGAAAAGATAC | 60.148 | 40.741 | 2.76 | 0.00 | 35.71 | 2.24 |
678 | 713 | 6.877322 | CGGGGTTTCACTCTTTAGAAAAGATA | 59.123 | 38.462 | 2.76 | 0.00 | 35.71 | 1.98 |
679 | 714 | 5.705905 | CGGGGTTTCACTCTTTAGAAAAGAT | 59.294 | 40.000 | 2.76 | 0.00 | 35.71 | 2.40 |
680 | 715 | 5.061179 | CGGGGTTTCACTCTTTAGAAAAGA | 58.939 | 41.667 | 2.39 | 2.39 | 35.71 | 2.52 |
681 | 716 | 4.320275 | GCGGGGTTTCACTCTTTAGAAAAG | 60.320 | 45.833 | 0.00 | 0.00 | 35.71 | 2.27 |
682 | 717 | 3.566742 | GCGGGGTTTCACTCTTTAGAAAA | 59.433 | 43.478 | 0.00 | 0.00 | 35.71 | 2.29 |
683 | 718 | 3.143728 | GCGGGGTTTCACTCTTTAGAAA | 58.856 | 45.455 | 0.00 | 0.00 | 0.00 | 2.52 |
684 | 719 | 2.370849 | AGCGGGGTTTCACTCTTTAGAA | 59.629 | 45.455 | 0.00 | 0.00 | 0.00 | 2.10 |
685 | 720 | 1.975680 | AGCGGGGTTTCACTCTTTAGA | 59.024 | 47.619 | 0.00 | 0.00 | 0.00 | 2.10 |
686 | 721 | 2.474410 | AGCGGGGTTTCACTCTTTAG | 57.526 | 50.000 | 0.00 | 0.00 | 0.00 | 1.85 |
687 | 722 | 2.882137 | CAAAGCGGGGTTTCACTCTTTA | 59.118 | 45.455 | 0.00 | 0.00 | 0.00 | 1.85 |
688 | 723 | 1.681264 | CAAAGCGGGGTTTCACTCTTT | 59.319 | 47.619 | 0.00 | 0.00 | 0.00 | 2.52 |
689 | 724 | 1.318576 | CAAAGCGGGGTTTCACTCTT | 58.681 | 50.000 | 0.00 | 0.00 | 0.00 | 2.85 |
690 | 725 | 0.537371 | CCAAAGCGGGGTTTCACTCT | 60.537 | 55.000 | 0.00 | 0.00 | 0.00 | 3.24 |
691 | 726 | 0.536460 | TCCAAAGCGGGGTTTCACTC | 60.536 | 55.000 | 0.00 | 0.00 | 34.36 | 3.51 |
692 | 727 | 0.112412 | ATCCAAAGCGGGGTTTCACT | 59.888 | 50.000 | 0.00 | 0.00 | 34.36 | 3.41 |
693 | 728 | 1.828979 | TATCCAAAGCGGGGTTTCAC | 58.171 | 50.000 | 0.00 | 0.00 | 34.36 | 3.18 |
694 | 729 | 2.588464 | TTATCCAAAGCGGGGTTTCA | 57.412 | 45.000 | 0.00 | 0.00 | 34.36 | 2.69 |
695 | 730 | 4.465632 | AAATTATCCAAAGCGGGGTTTC | 57.534 | 40.909 | 0.00 | 0.00 | 34.36 | 2.78 |
696 | 731 | 4.901197 | AAAATTATCCAAAGCGGGGTTT | 57.099 | 36.364 | 0.00 | 0.00 | 34.36 | 3.27 |
697 | 732 | 5.020795 | ACTAAAATTATCCAAAGCGGGGTT | 58.979 | 37.500 | 0.00 | 0.00 | 34.36 | 4.11 |
698 | 733 | 4.606210 | ACTAAAATTATCCAAAGCGGGGT | 58.394 | 39.130 | 0.00 | 0.00 | 34.36 | 4.95 |
699 | 734 | 4.261031 | CGACTAAAATTATCCAAAGCGGGG | 60.261 | 45.833 | 0.00 | 0.00 | 34.36 | 5.73 |
700 | 735 | 4.573201 | TCGACTAAAATTATCCAAAGCGGG | 59.427 | 41.667 | 0.00 | 0.00 | 34.36 | 6.13 |
701 | 736 | 5.728351 | TCGACTAAAATTATCCAAAGCGG | 57.272 | 39.130 | 0.00 | 0.00 | 0.00 | 5.52 |
702 | 737 | 5.198274 | GCTCGACTAAAATTATCCAAAGCG | 58.802 | 41.667 | 0.00 | 0.00 | 0.00 | 4.68 |
703 | 738 | 5.065988 | TGGCTCGACTAAAATTATCCAAAGC | 59.934 | 40.000 | 0.00 | 0.00 | 0.00 | 3.51 |
704 | 739 | 6.677781 | TGGCTCGACTAAAATTATCCAAAG | 57.322 | 37.500 | 0.00 | 0.00 | 0.00 | 2.77 |
705 | 740 | 6.039270 | CCATGGCTCGACTAAAATTATCCAAA | 59.961 | 38.462 | 0.00 | 0.00 | 0.00 | 3.28 |
706 | 741 | 5.530915 | CCATGGCTCGACTAAAATTATCCAA | 59.469 | 40.000 | 0.00 | 0.00 | 0.00 | 3.53 |
707 | 742 | 5.063204 | CCATGGCTCGACTAAAATTATCCA | 58.937 | 41.667 | 0.00 | 0.00 | 0.00 | 3.41 |
708 | 743 | 5.305585 | TCCATGGCTCGACTAAAATTATCC | 58.694 | 41.667 | 6.96 | 0.00 | 0.00 | 2.59 |
709 | 744 | 6.092807 | GGATCCATGGCTCGACTAAAATTATC | 59.907 | 42.308 | 6.96 | 0.00 | 0.00 | 1.75 |
710 | 745 | 5.940470 | GGATCCATGGCTCGACTAAAATTAT | 59.060 | 40.000 | 6.96 | 0.00 | 0.00 | 1.28 |
711 | 746 | 5.163248 | TGGATCCATGGCTCGACTAAAATTA | 60.163 | 40.000 | 11.44 | 0.00 | 0.00 | 1.40 |
712 | 747 | 4.137543 | GGATCCATGGCTCGACTAAAATT | 58.862 | 43.478 | 6.96 | 0.00 | 0.00 | 1.82 |
713 | 748 | 3.136443 | TGGATCCATGGCTCGACTAAAAT | 59.864 | 43.478 | 11.44 | 0.00 | 0.00 | 1.82 |
714 | 749 | 2.503765 | TGGATCCATGGCTCGACTAAAA | 59.496 | 45.455 | 11.44 | 0.00 | 0.00 | 1.52 |
743 | 785 | 1.151450 | CCAAACTGCCACTCCTGGT | 59.849 | 57.895 | 0.00 | 0.00 | 40.17 | 4.00 |
745 | 787 | 2.270986 | GCCCAAACTGCCACTCCTG | 61.271 | 63.158 | 0.00 | 0.00 | 0.00 | 3.86 |
746 | 788 | 2.116125 | GCCCAAACTGCCACTCCT | 59.884 | 61.111 | 0.00 | 0.00 | 0.00 | 3.69 |
747 | 789 | 2.203480 | TGCCCAAACTGCCACTCC | 60.203 | 61.111 | 0.00 | 0.00 | 0.00 | 3.85 |
748 | 790 | 1.228245 | TCTGCCCAAACTGCCACTC | 60.228 | 57.895 | 0.00 | 0.00 | 0.00 | 3.51 |
754 | 796 | 1.683011 | CCATACCCTCTGCCCAAACTG | 60.683 | 57.143 | 0.00 | 0.00 | 0.00 | 3.16 |
765 | 807 | 5.420409 | CAAGACTAGTGTTTCCATACCCTC | 58.580 | 45.833 | 0.00 | 0.00 | 0.00 | 4.30 |
782 | 824 | 1.417890 | AGTGCAGTTACCAGCAAGACT | 59.582 | 47.619 | 1.76 | 0.00 | 43.20 | 3.24 |
785 | 827 | 2.221169 | TCAAGTGCAGTTACCAGCAAG | 58.779 | 47.619 | 6.43 | 0.00 | 43.20 | 4.01 |
788 | 830 | 1.884235 | ACTCAAGTGCAGTTACCAGC | 58.116 | 50.000 | 6.43 | 0.00 | 0.00 | 4.85 |
789 | 831 | 3.548818 | GCAAACTCAAGTGCAGTTACCAG | 60.549 | 47.826 | 6.43 | 6.04 | 40.58 | 4.00 |
790 | 832 | 2.357637 | GCAAACTCAAGTGCAGTTACCA | 59.642 | 45.455 | 6.43 | 0.00 | 40.58 | 3.25 |
792 | 834 | 2.357637 | TGGCAAACTCAAGTGCAGTTAC | 59.642 | 45.455 | 6.43 | 0.00 | 42.74 | 2.50 |
793 | 835 | 2.649190 | TGGCAAACTCAAGTGCAGTTA | 58.351 | 42.857 | 6.43 | 0.00 | 42.74 | 2.24 |
795 | 837 | 1.406539 | CTTGGCAAACTCAAGTGCAGT | 59.593 | 47.619 | 0.00 | 0.00 | 42.74 | 4.40 |
796 | 838 | 2.129823 | CTTGGCAAACTCAAGTGCAG | 57.870 | 50.000 | 0.00 | 0.00 | 42.74 | 4.41 |
819 | 861 | 7.848051 | GCATTCTGTAGTTGAGATACGATTTTG | 59.152 | 37.037 | 0.00 | 0.00 | 0.00 | 2.44 |
826 | 868 | 7.761704 | TCTCTTTGCATTCTGTAGTTGAGATAC | 59.238 | 37.037 | 0.00 | 0.00 | 0.00 | 2.24 |
849 | 894 | 1.384989 | TTCCCGACGAGCATCCTCTC | 61.385 | 60.000 | 0.00 | 0.00 | 35.90 | 3.20 |
851 | 896 | 0.105039 | ATTTCCCGACGAGCATCCTC | 59.895 | 55.000 | 0.00 | 0.00 | 34.66 | 3.71 |
862 | 907 | 0.535328 | TGCAAACCGACATTTCCCGA | 60.535 | 50.000 | 0.00 | 0.00 | 0.00 | 5.14 |
868 | 913 | 2.627699 | AGAAACCATGCAAACCGACATT | 59.372 | 40.909 | 0.00 | 0.00 | 0.00 | 2.71 |
876 | 921 | 5.426504 | ACAAAATGACAGAAACCATGCAAA | 58.573 | 33.333 | 0.00 | 0.00 | 0.00 | 3.68 |
889 | 934 | 6.124340 | AGCCATATCTGATGACAAAATGACA | 58.876 | 36.000 | 0.00 | 0.00 | 0.00 | 3.58 |
915 | 961 | 5.476091 | AATTAGAGAATCGATGGGACTCC | 57.524 | 43.478 | 0.00 | 0.00 | 42.67 | 3.85 |
916 | 962 | 6.583050 | CGTTAATTAGAGAATCGATGGGACTC | 59.417 | 42.308 | 0.00 | 6.39 | 42.67 | 3.36 |
920 | 966 | 6.183360 | GCATCGTTAATTAGAGAATCGATGGG | 60.183 | 42.308 | 20.36 | 3.30 | 42.19 | 4.00 |
945 | 991 | 2.223688 | TGTTCAACAATCAACAAGGCGG | 60.224 | 45.455 | 0.00 | 0.00 | 29.43 | 6.13 |
1006 | 1052 | 5.942826 | AGAGGAAAGAGCAAACCTTAATGAG | 59.057 | 40.000 | 0.00 | 0.00 | 32.53 | 2.90 |
1066 | 1114 | 7.147863 | TGCCTCACAAATTACTCATTATGCATT | 60.148 | 33.333 | 3.54 | 0.00 | 0.00 | 3.56 |
1075 | 1123 | 6.472016 | TCAGTAATGCCTCACAAATTACTCA | 58.528 | 36.000 | 4.70 | 0.00 | 42.43 | 3.41 |
1106 | 1162 | 2.351157 | GCAGTGGTCAGAAATGCACTTC | 60.351 | 50.000 | 0.00 | 0.00 | 36.88 | 3.01 |
1112 | 1168 | 2.224606 | ACAGTGCAGTGGTCAGAAATG | 58.775 | 47.619 | 24.91 | 0.00 | 0.00 | 2.32 |
1131 | 1187 | 9.823098 | CTCTGCTTCATAATAAATCAGCATTAC | 57.177 | 33.333 | 0.00 | 0.00 | 36.70 | 1.89 |
1138 | 1194 | 6.000219 | GGAGGCTCTGCTTCATAATAAATCA | 59.000 | 40.000 | 15.23 | 0.00 | 36.34 | 2.57 |
1273 | 1333 | 2.443016 | TTTTTGCGGGGGCACAGT | 60.443 | 55.556 | 0.00 | 0.00 | 0.00 | 3.55 |
1331 | 1391 | 9.693739 | CATCTTACTACATATCCTGATAGTCCT | 57.306 | 37.037 | 0.00 | 0.00 | 0.00 | 3.85 |
1334 | 1394 | 9.168451 | CGTCATCTTACTACATATCCTGATAGT | 57.832 | 37.037 | 0.00 | 0.00 | 0.00 | 2.12 |
1335 | 1395 | 8.616942 | CCGTCATCTTACTACATATCCTGATAG | 58.383 | 40.741 | 0.00 | 0.00 | 0.00 | 2.08 |
1336 | 1396 | 8.107729 | ACCGTCATCTTACTACATATCCTGATA | 58.892 | 37.037 | 0.00 | 0.00 | 0.00 | 2.15 |
1337 | 1397 | 6.948886 | ACCGTCATCTTACTACATATCCTGAT | 59.051 | 38.462 | 0.00 | 0.00 | 0.00 | 2.90 |
1338 | 1398 | 6.304624 | ACCGTCATCTTACTACATATCCTGA | 58.695 | 40.000 | 0.00 | 0.00 | 0.00 | 3.86 |
1509 | 3101 | 5.314923 | TCATTTGGCTGAGCTAAATTCAC | 57.685 | 39.130 | 23.48 | 0.00 | 44.91 | 3.18 |
1517 | 3109 | 3.641434 | ACACTATCATTTGGCTGAGCT | 57.359 | 42.857 | 3.72 | 0.00 | 0.00 | 4.09 |
1537 | 3129 | 6.544197 | TGCAACAATGTTTAAGAAGGACACTA | 59.456 | 34.615 | 0.00 | 0.00 | 0.00 | 2.74 |
1588 | 3185 | 6.039047 | GGCATCATAGGCATAATATCCAACTG | 59.961 | 42.308 | 0.00 | 0.00 | 0.00 | 3.16 |
1596 | 3193 | 6.153170 | CCATGTTTGGCATCATAGGCATAATA | 59.847 | 38.462 | 5.59 | 0.00 | 44.02 | 0.98 |
1599 | 3196 | 3.827876 | CCATGTTTGGCATCATAGGCATA | 59.172 | 43.478 | 5.59 | 0.00 | 44.02 | 3.14 |
1601 | 3198 | 2.033372 | CCATGTTTGGCATCATAGGCA | 58.967 | 47.619 | 5.59 | 0.00 | 42.83 | 4.75 |
1603 | 3200 | 2.669781 | ACCCATGTTTGGCATCATAGG | 58.330 | 47.619 | 13.00 | 13.00 | 42.15 | 2.57 |
1609 | 3206 | 4.095946 | AGAACAATACCCATGTTTGGCAT | 58.904 | 39.130 | 0.00 | 0.00 | 40.90 | 4.40 |
1610 | 3207 | 3.505386 | AGAACAATACCCATGTTTGGCA | 58.495 | 40.909 | 0.00 | 0.00 | 40.90 | 4.92 |
1611 | 3208 | 5.852282 | ATAGAACAATACCCATGTTTGGC | 57.148 | 39.130 | 0.00 | 0.00 | 40.90 | 4.52 |
1612 | 3209 | 9.748708 | CATTAATAGAACAATACCCATGTTTGG | 57.251 | 33.333 | 0.00 | 0.00 | 40.90 | 3.28 |
1615 | 3212 | 8.850156 | GCTCATTAATAGAACAATACCCATGTT | 58.150 | 33.333 | 0.00 | 0.00 | 43.37 | 2.71 |
1616 | 3213 | 7.448469 | GGCTCATTAATAGAACAATACCCATGT | 59.552 | 37.037 | 0.00 | 0.00 | 0.00 | 3.21 |
1619 | 3216 | 5.995282 | CGGCTCATTAATAGAACAATACCCA | 59.005 | 40.000 | 0.00 | 0.00 | 0.00 | 4.51 |
1620 | 3217 | 5.995897 | ACGGCTCATTAATAGAACAATACCC | 59.004 | 40.000 | 0.00 | 0.00 | 0.00 | 3.69 |
1621 | 3218 | 6.704493 | TCACGGCTCATTAATAGAACAATACC | 59.296 | 38.462 | 0.00 | 0.00 | 0.00 | 2.73 |
1623 | 3220 | 8.367911 | AGATCACGGCTCATTAATAGAACAATA | 58.632 | 33.333 | 0.00 | 0.00 | 0.00 | 1.90 |
1624 | 3221 | 7.220030 | AGATCACGGCTCATTAATAGAACAAT | 58.780 | 34.615 | 0.00 | 0.00 | 0.00 | 2.71 |
1625 | 3222 | 6.582636 | AGATCACGGCTCATTAATAGAACAA | 58.417 | 36.000 | 0.00 | 0.00 | 0.00 | 2.83 |
1626 | 3223 | 6.040955 | AGAGATCACGGCTCATTAATAGAACA | 59.959 | 38.462 | 0.00 | 0.00 | 34.85 | 3.18 |
1627 | 3224 | 6.451393 | AGAGATCACGGCTCATTAATAGAAC | 58.549 | 40.000 | 0.00 | 0.00 | 34.85 | 3.01 |
1628 | 3225 | 6.656632 | AGAGATCACGGCTCATTAATAGAA | 57.343 | 37.500 | 0.00 | 0.00 | 34.85 | 2.10 |
1629 | 3226 | 6.265422 | TCAAGAGATCACGGCTCATTAATAGA | 59.735 | 38.462 | 0.00 | 0.00 | 34.85 | 1.98 |
1630 | 3227 | 6.364706 | GTCAAGAGATCACGGCTCATTAATAG | 59.635 | 42.308 | 0.00 | 0.00 | 34.85 | 1.73 |
1740 | 3341 | 2.537560 | CGATGTCAATGGAGCGGCC | 61.538 | 63.158 | 0.00 | 0.00 | 37.10 | 6.13 |
1784 | 3385 | 2.530460 | TGTGGGCCAAAGCTTGATAT | 57.470 | 45.000 | 8.40 | 0.00 | 39.73 | 1.63 |
1785 | 3386 | 2.101783 | CATGTGGGCCAAAGCTTGATA | 58.898 | 47.619 | 8.40 | 0.00 | 39.73 | 2.15 |
1963 | 3567 | 5.887214 | TTCTCGGGGAATATTTGAGATCA | 57.113 | 39.130 | 0.00 | 0.00 | 35.77 | 2.92 |
2009 | 3614 | 7.701924 | ACATTTGTGTTTCAGTTGTATCAACTG | 59.298 | 33.333 | 26.65 | 26.65 | 46.67 | 3.16 |
2054 | 3664 | 1.065345 | GGGCAGTCTCCTAAACTTCCC | 60.065 | 57.143 | 0.00 | 0.00 | 41.90 | 3.97 |
2055 | 3665 | 1.909986 | AGGGCAGTCTCCTAAACTTCC | 59.090 | 52.381 | 0.00 | 0.00 | 31.86 | 3.46 |
2210 | 3826 | 3.448934 | ACCTCTTGAGGTGACATGATCT | 58.551 | 45.455 | 20.27 | 0.00 | 41.33 | 2.75 |
2285 | 3901 | 5.743026 | TCTTCACTGCGTTGATTTTGTAA | 57.257 | 34.783 | 0.00 | 0.00 | 0.00 | 2.41 |
2359 | 3975 | 0.591488 | CGCGCGTGATCAAGCTAGTA | 60.591 | 55.000 | 27.21 | 0.00 | 33.62 | 1.82 |
2399 | 4015 | 9.462606 | CCCAACAAGTTTTAGGAGAACTATAAT | 57.537 | 33.333 | 0.00 | 0.00 | 36.38 | 1.28 |
2405 | 4021 | 6.650427 | AATCCCAACAAGTTTTAGGAGAAC | 57.350 | 37.500 | 0.00 | 0.00 | 0.00 | 3.01 |
2536 | 4152 | 6.398234 | TTCCTTAAGCATGCAACAGTTAAA | 57.602 | 33.333 | 21.98 | 1.47 | 0.00 | 1.52 |
2541 | 4157 | 3.578688 | GGTTTCCTTAAGCATGCAACAG | 58.421 | 45.455 | 21.98 | 11.52 | 34.37 | 3.16 |
2723 | 4339 | 3.575351 | GAGTCCCTGAAGCACGCGT | 62.575 | 63.158 | 5.58 | 5.58 | 0.00 | 6.01 |
2761 | 4377 | 8.698210 | ACTACCAACCACGATATAATTTGTCTA | 58.302 | 33.333 | 0.00 | 0.00 | 0.00 | 2.59 |
2793 | 4409 | 8.125978 | TAAACTAGTTTTCGGATAGAGTCCAA | 57.874 | 34.615 | 25.07 | 0.00 | 39.17 | 3.53 |
2886 | 4502 | 1.195115 | GCATATCCGATGCTAGGGGA | 58.805 | 55.000 | 2.29 | 0.00 | 41.52 | 4.81 |
2921 | 4538 | 4.154556 | CCTATTTTTCCGTGCTTTTCCGTA | 59.845 | 41.667 | 0.00 | 0.00 | 0.00 | 4.02 |
2937 | 4554 | 9.500701 | AATATGTTGTGGTTTATCCCCTATTTT | 57.499 | 29.630 | 0.00 | 0.00 | 34.77 | 1.82 |
2938 | 4555 | 9.500701 | AAATATGTTGTGGTTTATCCCCTATTT | 57.499 | 29.630 | 0.00 | 0.00 | 34.77 | 1.40 |
3054 | 4672 | 1.000607 | GTGAGCGACTAGTTGACCACA | 60.001 | 52.381 | 21.08 | 10.62 | 0.00 | 4.17 |
3119 | 4747 | 1.403814 | TCGATCTGGAGCGATTCCTT | 58.596 | 50.000 | 6.85 | 0.00 | 44.77 | 3.36 |
3141 | 4769 | 3.812019 | GGCGAGGCGAGACGAGAA | 61.812 | 66.667 | 0.00 | 0.00 | 0.00 | 2.87 |
3178 | 4809 | 4.664677 | ACGGCAGGACGACAGTGC | 62.665 | 66.667 | 0.00 | 0.00 | 39.15 | 4.40 |
3179 | 4810 | 2.734723 | CACGGCAGGACGACAGTG | 60.735 | 66.667 | 0.00 | 0.00 | 37.61 | 3.66 |
3180 | 4811 | 4.664677 | GCACGGCAGGACGACAGT | 62.665 | 66.667 | 0.00 | 0.00 | 37.61 | 3.55 |
3235 | 4866 | 4.827087 | AGAGTGCGGCATGGCGAG | 62.827 | 66.667 | 41.46 | 17.46 | 35.06 | 5.03 |
3236 | 4867 | 4.819761 | GAGAGTGCGGCATGGCGA | 62.820 | 66.667 | 41.46 | 24.67 | 35.06 | 5.54 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.