Multiple sequence alignment - TraesCS6A01G111900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G111900 chr6A 100.000 1716 0 0 2728 4443 80884995 80883280 0.000000e+00 3169.0
1 TraesCS6A01G111900 chr6A 100.000 1374 0 0 1 1374 80887722 80886349 0.000000e+00 2538.0
2 TraesCS6A01G111900 chr6A 100.000 1150 0 0 1547 2696 80886176 80885027 0.000000e+00 2087.0
3 TraesCS6A01G111900 chr6A 99.751 401 1 0 1975 2375 515065957 515066357 0.000000e+00 736.0
4 TraesCS6A01G111900 chr6A 100.000 256 0 0 2386 2641 515066102 515066357 1.450000e-129 473.0
5 TraesCS6A01G111900 chr6A 99.609 256 1 0 2386 2641 80885603 80885348 6.730000e-128 468.0
6 TraesCS6A01G111900 chr6A 80.897 513 80 12 1870 2375 614869683 614870184 5.390000e-104 388.0
7 TraesCS6A01G111900 chr6A 88.968 281 31 0 2906 3186 81109192 81108912 9.150000e-92 348.0
8 TraesCS6A01G111900 chr6A 85.263 285 33 5 3297 3573 81108743 81108460 7.270000e-73 285.0
9 TraesCS6A01G111900 chr6A 88.587 184 19 1 2729 2912 81109496 81109315 5.780000e-54 222.0
10 TraesCS6A01G111900 chr6A 85.027 187 19 3 918 1095 81109964 81109778 9.820000e-42 182.0
11 TraesCS6A01G111900 chr6A 93.651 63 2 2 1 63 121999282 121999222 4.730000e-15 93.5
12 TraesCS6A01G111900 chr6B 99.517 829 4 0 1547 2375 320861400 320862228 0.000000e+00 1509.0
13 TraesCS6A01G111900 chr6B 96.016 728 24 5 3718 4443 642909892 642910616 0.000000e+00 1179.0
14 TraesCS6A01G111900 chr6B 89.056 466 27 10 917 1374 137422593 137422144 1.400000e-154 556.0
15 TraesCS6A01G111900 chr6B 94.678 357 17 2 3187 3542 137421530 137421175 1.810000e-153 553.0
16 TraesCS6A01G111900 chr6B 94.603 315 12 1 2386 2695 320861973 320862287 5.130000e-139 505.0
17 TraesCS6A01G111900 chr6B 89.444 360 23 11 569 913 137423102 137422743 1.470000e-119 440.0
18 TraesCS6A01G111900 chr6B 93.836 292 11 3 2906 3190 137421849 137421558 2.450000e-117 433.0
19 TraesCS6A01G111900 chr6B 95.055 182 9 0 2728 2909 137422141 137421960 2.020000e-73 287.0
20 TraesCS6A01G111900 chr6B 90.588 170 9 5 3553 3721 137421220 137421057 7.480000e-53 219.0
21 TraesCS6A01G111900 chr6B 83.475 236 32 7 2910 3142 140598540 140598309 3.480000e-51 213.0
22 TraesCS6A01G111900 chr6B 90.476 63 5 1 2587 2648 716467175 716467113 1.020000e-11 82.4
23 TraesCS6A01G111900 chr1B 99.517 829 4 0 1547 2375 570725051 570725879 0.000000e+00 1509.0
24 TraesCS6A01G111900 chr1B 100.000 256 0 0 2386 2641 570725624 570725879 1.450000e-129 473.0
25 TraesCS6A01G111900 chr1B 84.167 120 19 0 426 545 630470243 630470124 2.810000e-22 117.0
26 TraesCS6A01G111900 chr5B 99.397 829 5 0 1547 2375 491257995 491257167 0.000000e+00 1504.0
27 TraesCS6A01G111900 chr5B 90.857 525 31 5 1547 2070 31444779 31445287 0.000000e+00 688.0
28 TraesCS6A01G111900 chr5B 99.678 311 1 0 2386 2696 491257422 491257112 1.790000e-158 569.0
29 TraesCS6A01G111900 chr5B 83.242 364 46 11 46 405 51186407 51186759 1.990000e-83 320.0
30 TraesCS6A01G111900 chr5B 91.089 202 16 2 2386 2587 31445294 31445493 5.660000e-69 272.0
31 TraesCS6A01G111900 chr1A 99.397 829 5 0 1547 2375 22273055 22273883 0.000000e+00 1504.0
32 TraesCS6A01G111900 chr1A 95.856 724 26 4 3720 4443 102162363 102161644 0.000000e+00 1168.0
33 TraesCS6A01G111900 chr1A 100.000 256 0 0 2386 2641 22273628 22273883 1.450000e-129 473.0
34 TraesCS6A01G111900 chr1A 91.667 72 3 3 1 69 418887467 418887538 3.660000e-16 97.1
35 TraesCS6A01G111900 chr7B 99.276 829 6 0 1547 2375 622843620 622844448 0.000000e+00 1498.0
36 TraesCS6A01G111900 chr7B 100.000 311 0 0 2386 2696 622844193 622844503 3.850000e-160 575.0
37 TraesCS6A01G111900 chr7A 96.970 726 17 5 3719 4443 720918956 720918235 0.000000e+00 1214.0
38 TraesCS6A01G111900 chr7A 96.281 726 25 2 3718 4443 150987159 150986436 0.000000e+00 1190.0
39 TraesCS6A01G111900 chr7A 96.154 728 22 4 3718 4443 671307921 671308644 0.000000e+00 1184.0
40 TraesCS6A01G111900 chr3A 96.296 729 20 4 3715 4443 658884814 658885535 0.000000e+00 1190.0
41 TraesCS6A01G111900 chr3A 96.138 725 24 4 3719 4443 456749803 456750523 0.000000e+00 1181.0
42 TraesCS6A01G111900 chr3A 95.868 726 25 5 3719 4443 638933509 638934230 0.000000e+00 1170.0
43 TraesCS6A01G111900 chr5A 96.281 726 24 3 3718 4443 394750861 394751583 0.000000e+00 1188.0
44 TraesCS6A01G111900 chr6D 93.855 537 23 6 3187 3717 63733436 63732904 0.000000e+00 800.0
45 TraesCS6A01G111900 chr6D 88.849 556 21 9 610 1153 63734535 63734009 0.000000e+00 645.0
46 TraesCS6A01G111900 chr6D 94.848 330 16 1 2868 3196 63733786 63733457 8.520000e-142 514.0
47 TraesCS6A01G111900 chr6D 81.964 560 50 22 3187 3707 63761836 63761289 1.140000e-115 427.0
48 TraesCS6A01G111900 chr6D 86.702 376 37 10 46 413 352898556 352898926 5.350000e-109 405.0
49 TraesCS6A01G111900 chr6D 84.946 372 37 10 46 408 293498540 293498179 4.230000e-95 359.0
50 TraesCS6A01G111900 chr6D 85.440 364 30 11 46 408 291907726 291907385 1.520000e-94 357.0
51 TraesCS6A01G111900 chr6D 89.362 282 30 0 2906 3187 63762148 63761867 5.470000e-94 355.0
52 TraesCS6A01G111900 chr6D 95.480 177 8 0 2733 2909 63734013 63733837 2.620000e-72 283.0
53 TraesCS6A01G111900 chr6D 83.475 236 32 7 2910 3142 65499233 65499002 3.480000e-51 213.0
54 TraesCS6A01G111900 chr6D 85.946 185 19 1 918 1095 63762965 63762781 1.630000e-44 191.0
55 TraesCS6A01G111900 chr6D 86.364 132 11 2 1124 1255 63762606 63762482 2.160000e-28 137.0
56 TraesCS6A01G111900 chr4B 99.751 401 1 0 1975 2375 586211847 586212247 0.000000e+00 736.0
57 TraesCS6A01G111900 chr4B 99.457 368 1 1 1547 1914 586211485 586211851 0.000000e+00 667.0
58 TraesCS6A01G111900 chr4B 100.000 311 0 0 2386 2696 586211992 586212302 3.850000e-160 575.0
59 TraesCS6A01G111900 chr4B 96.667 60 2 0 1 60 148876309 148876368 2.830000e-17 100.0
60 TraesCS6A01G111900 chr4D 90.850 459 33 4 1889 2347 299352873 299352424 1.370000e-169 606.0
61 TraesCS6A01G111900 chr4D 94.461 343 17 2 1548 1889 299353377 299353036 1.090000e-145 527.0
62 TraesCS6A01G111900 chr4D 91.228 228 19 1 2386 2613 299352650 299352424 4.320000e-80 309.0
63 TraesCS6A01G111900 chr3D 84.384 365 36 12 46 405 410382103 410381755 5.500000e-89 339.0
64 TraesCS6A01G111900 chrUn 83.152 368 48 10 46 408 116833713 116834071 1.540000e-84 324.0
65 TraesCS6A01G111900 chr4A 83.469 369 39 14 46 408 505823037 505822685 1.540000e-84 324.0
66 TraesCS6A01G111900 chr5D 87.823 271 25 6 46 315 496064781 496065044 1.200000e-80 311.0
67 TraesCS6A01G111900 chr5D 93.846 65 2 2 1 64 410256209 410256146 3.660000e-16 97.1
68 TraesCS6A01G111900 chr1D 80.914 372 47 13 46 405 481461505 481461864 5.660000e-69 272.0
69 TraesCS6A01G111900 chr3B 95.161 62 1 2 1 62 106674468 106674409 3.660000e-16 97.1
70 TraesCS6A01G111900 chr3B 89.041 73 6 2 1 72 182708003 182707932 6.120000e-14 89.8
71 TraesCS6A01G111900 chr2D 88.889 81 3 5 1 76 644852236 644852157 1.320000e-15 95.3
72 TraesCS6A01G111900 chr2A 92.537 67 2 3 1 66 642561310 642561374 4.730000e-15 93.5
73 TraesCS6A01G111900 chr7D 86.420 81 7 4 1 80 443276198 443276121 7.920000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G111900 chr6A 80883280 80887722 4442 True 2065.500000 3169 99.902250 1 4443 4 chr6A.!!$R2 4442
1 TraesCS6A01G111900 chr6A 614869683 614870184 501 False 388.000000 388 80.897000 1870 2375 1 chr6A.!!$F1 505
2 TraesCS6A01G111900 chr6A 81108460 81109964 1504 True 259.250000 348 86.961250 918 3573 4 chr6A.!!$R3 2655
3 TraesCS6A01G111900 chr6B 642909892 642910616 724 False 1179.000000 1179 96.016000 3718 4443 1 chr6B.!!$F1 725
4 TraesCS6A01G111900 chr6B 320861400 320862287 887 False 1007.000000 1509 97.060000 1547 2695 2 chr6B.!!$F2 1148
5 TraesCS6A01G111900 chr6B 137421057 137423102 2045 True 414.666667 556 92.109500 569 3721 6 chr6B.!!$R3 3152
6 TraesCS6A01G111900 chr1B 570725051 570725879 828 False 991.000000 1509 99.758500 1547 2641 2 chr1B.!!$F1 1094
7 TraesCS6A01G111900 chr5B 491257112 491257995 883 True 1036.500000 1504 99.537500 1547 2696 2 chr5B.!!$R1 1149
8 TraesCS6A01G111900 chr5B 31444779 31445493 714 False 480.000000 688 90.973000 1547 2587 2 chr5B.!!$F2 1040
9 TraesCS6A01G111900 chr1A 102161644 102162363 719 True 1168.000000 1168 95.856000 3720 4443 1 chr1A.!!$R1 723
10 TraesCS6A01G111900 chr1A 22273055 22273883 828 False 988.500000 1504 99.698500 1547 2641 2 chr1A.!!$F2 1094
11 TraesCS6A01G111900 chr7B 622843620 622844503 883 False 1036.500000 1498 99.638000 1547 2696 2 chr7B.!!$F1 1149
12 TraesCS6A01G111900 chr7A 720918235 720918956 721 True 1214.000000 1214 96.970000 3719 4443 1 chr7A.!!$R2 724
13 TraesCS6A01G111900 chr7A 150986436 150987159 723 True 1190.000000 1190 96.281000 3718 4443 1 chr7A.!!$R1 725
14 TraesCS6A01G111900 chr7A 671307921 671308644 723 False 1184.000000 1184 96.154000 3718 4443 1 chr7A.!!$F1 725
15 TraesCS6A01G111900 chr3A 658884814 658885535 721 False 1190.000000 1190 96.296000 3715 4443 1 chr3A.!!$F3 728
16 TraesCS6A01G111900 chr3A 456749803 456750523 720 False 1181.000000 1181 96.138000 3719 4443 1 chr3A.!!$F1 724
17 TraesCS6A01G111900 chr3A 638933509 638934230 721 False 1170.000000 1170 95.868000 3719 4443 1 chr3A.!!$F2 724
18 TraesCS6A01G111900 chr5A 394750861 394751583 722 False 1188.000000 1188 96.281000 3718 4443 1 chr5A.!!$F1 725
19 TraesCS6A01G111900 chr6D 63732904 63734535 1631 True 560.500000 800 93.258000 610 3717 4 chr6D.!!$R4 3107
20 TraesCS6A01G111900 chr6D 63761289 63762965 1676 True 277.500000 427 85.909000 918 3707 4 chr6D.!!$R5 2789
21 TraesCS6A01G111900 chr4B 586211485 586212302 817 False 659.333333 736 99.736000 1547 2696 3 chr4B.!!$F2 1149
22 TraesCS6A01G111900 chr4D 299352424 299353377 953 True 480.666667 606 92.179667 1548 2613 3 chr4D.!!$R1 1065

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
485 486 0.107214 GTCCATCTGGCCGATCCAAA 60.107 55.000 0.00 0.0 46.01 3.28 F
491 492 0.109781 CTGGCCGATCCAAACAAACG 60.110 55.000 0.00 0.0 46.01 3.60 F
527 528 0.457166 TACGTTCATTCGGGTCTGCG 60.457 55.000 0.00 0.0 34.94 5.18 F
544 545 0.511221 GCGCGTTGAAGTTGCTCTAA 59.489 50.000 8.43 0.0 0.00 2.10 F
758 775 1.350351 AGCAGAGCCAGTTGATCAGTT 59.650 47.619 0.00 0.0 0.00 3.16 F
2494 3041 0.246635 GGACCGTGTCTGCACATAGT 59.753 55.000 4.41 0.0 45.50 2.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1310 1685 0.107703 CCTAAGCTCCGCCAATGTGA 60.108 55.000 0.00 0.0 0.0 3.58 R
2449 2996 0.318614 CGCCAAATCGTGCCACTTTT 60.319 50.000 0.00 0.0 0.0 2.27 R
2450 2997 1.285641 CGCCAAATCGTGCCACTTT 59.714 52.632 0.00 0.0 0.0 2.66 R
2451 2998 2.625823 CCGCCAAATCGTGCCACTT 61.626 57.895 0.00 0.0 0.0 3.16 R
2622 3169 0.108992 TACGGTGGCGCTAAAGTGAG 60.109 55.000 7.64 0.0 0.0 3.51 R
3582 4346 0.322366 TCGCAGCACCCATGATCAAA 60.322 50.000 0.00 0.0 0.0 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 2.325509 GCGTGTGCGTAGGAAATTTT 57.674 45.000 0.00 0.00 40.81 1.82
23 24 2.657184 GCGTGTGCGTAGGAAATTTTT 58.343 42.857 0.00 0.00 40.81 1.94
43 44 6.956202 TTTTTGAAATTACTACGTTCCCCA 57.044 33.333 0.00 0.00 0.00 4.96
44 45 6.956202 TTTTGAAATTACTACGTTCCCCAA 57.044 33.333 0.00 0.00 0.00 4.12
45 46 5.945466 TTGAAATTACTACGTTCCCCAAC 57.055 39.130 0.00 0.00 0.00 3.77
46 47 4.970711 TGAAATTACTACGTTCCCCAACA 58.029 39.130 0.00 0.00 32.14 3.33
47 48 4.756135 TGAAATTACTACGTTCCCCAACAC 59.244 41.667 0.00 0.00 32.14 3.32
48 49 2.837532 TTACTACGTTCCCCAACACC 57.162 50.000 0.00 0.00 32.14 4.16
49 50 2.014010 TACTACGTTCCCCAACACCT 57.986 50.000 0.00 0.00 32.14 4.00
50 51 1.134228 ACTACGTTCCCCAACACCTT 58.866 50.000 0.00 0.00 32.14 3.50
51 52 1.202722 ACTACGTTCCCCAACACCTTG 60.203 52.381 0.00 0.00 32.14 3.61
52 53 1.071071 CTACGTTCCCCAACACCTTGA 59.929 52.381 0.00 0.00 32.14 3.02
53 54 0.179029 ACGTTCCCCAACACCTTGAG 60.179 55.000 0.00 0.00 32.14 3.02
54 55 1.515521 CGTTCCCCAACACCTTGAGC 61.516 60.000 0.00 0.00 32.14 4.26
55 56 1.228124 TTCCCCAACACCTTGAGCG 60.228 57.895 0.00 0.00 0.00 5.03
56 57 3.365265 CCCCAACACCTTGAGCGC 61.365 66.667 0.00 0.00 0.00 5.92
57 58 2.281761 CCCAACACCTTGAGCGCT 60.282 61.111 11.27 11.27 0.00 5.92
58 59 2.620112 CCCAACACCTTGAGCGCTG 61.620 63.158 18.48 1.67 0.00 5.18
59 60 2.620112 CCAACACCTTGAGCGCTGG 61.620 63.158 18.48 13.67 0.00 4.85
60 61 1.597854 CAACACCTTGAGCGCTGGA 60.598 57.895 18.48 0.82 0.00 3.86
61 62 1.148273 AACACCTTGAGCGCTGGAA 59.852 52.632 18.48 6.45 0.00 3.53
62 63 0.886490 AACACCTTGAGCGCTGGAAG 60.886 55.000 18.48 16.72 0.00 3.46
63 64 2.037136 CACCTTGAGCGCTGGAAGG 61.037 63.158 30.49 30.49 41.85 3.46
64 65 3.130160 CCTTGAGCGCTGGAAGGC 61.130 66.667 24.78 8.05 30.26 4.35
65 66 2.359107 CTTGAGCGCTGGAAGGCA 60.359 61.111 18.48 1.16 33.36 4.75
66 67 2.669569 TTGAGCGCTGGAAGGCAC 60.670 61.111 18.48 0.00 33.36 5.01
67 68 3.474486 TTGAGCGCTGGAAGGCACA 62.474 57.895 18.48 0.00 33.36 4.57
68 69 3.426568 GAGCGCTGGAAGGCACAC 61.427 66.667 18.48 0.00 33.36 3.82
69 70 3.890936 GAGCGCTGGAAGGCACACT 62.891 63.158 18.48 0.00 33.36 3.55
70 71 3.730761 GCGCTGGAAGGCACACTG 61.731 66.667 0.00 0.00 31.60 3.66
71 72 3.052082 CGCTGGAAGGCACACTGG 61.052 66.667 0.00 0.00 0.00 4.00
72 73 3.368571 GCTGGAAGGCACACTGGC 61.369 66.667 0.00 0.00 44.10 4.85
79 80 4.664677 GGCACACTGGCTCGTCGT 62.665 66.667 0.00 0.00 40.14 4.34
80 81 3.406361 GCACACTGGCTCGTCGTG 61.406 66.667 0.00 0.00 34.92 4.35
81 82 2.734723 CACACTGGCTCGTCGTGG 60.735 66.667 0.00 0.00 33.13 4.94
82 83 2.910479 ACACTGGCTCGTCGTGGA 60.910 61.111 0.00 0.00 33.13 4.02
83 84 2.126307 CACTGGCTCGTCGTGGAG 60.126 66.667 0.00 1.86 37.11 3.86
84 85 3.374402 ACTGGCTCGTCGTGGAGG 61.374 66.667 7.41 0.00 34.56 4.30
85 86 4.135153 CTGGCTCGTCGTGGAGGG 62.135 72.222 7.41 0.00 34.56 4.30
97 98 4.410400 GGAGGGGCCAACGGTGAG 62.410 72.222 0.00 0.00 36.34 3.51
104 105 4.680237 CCAACGGTGAGCGGCAGA 62.680 66.667 9.43 0.00 0.00 4.26
105 106 2.434884 CAACGGTGAGCGGCAGAT 60.435 61.111 9.43 0.00 0.00 2.90
106 107 2.434884 AACGGTGAGCGGCAGATG 60.435 61.111 9.43 0.00 0.00 2.90
109 110 2.747460 GGTGAGCGGCAGATGCAA 60.747 61.111 7.19 0.00 44.36 4.08
110 111 2.117156 GGTGAGCGGCAGATGCAAT 61.117 57.895 7.19 0.00 44.36 3.56
111 112 0.815213 GGTGAGCGGCAGATGCAATA 60.815 55.000 7.19 0.00 44.36 1.90
112 113 1.233019 GTGAGCGGCAGATGCAATAT 58.767 50.000 7.19 0.00 44.36 1.28
113 114 1.069432 GTGAGCGGCAGATGCAATATG 60.069 52.381 7.19 0.00 44.36 1.78
114 115 1.202675 TGAGCGGCAGATGCAATATGA 60.203 47.619 7.19 0.00 37.89 2.15
115 116 1.463831 GAGCGGCAGATGCAATATGAG 59.536 52.381 7.19 0.00 37.89 2.90
116 117 0.109873 GCGGCAGATGCAATATGAGC 60.110 55.000 7.19 0.00 37.89 4.26
118 119 1.197036 CGGCAGATGCAATATGAGCAG 59.803 52.381 7.19 0.00 46.36 4.24
119 120 2.501261 GGCAGATGCAATATGAGCAGA 58.499 47.619 7.19 0.00 46.36 4.26
120 121 2.882761 GGCAGATGCAATATGAGCAGAA 59.117 45.455 7.19 0.00 46.36 3.02
121 122 3.058155 GGCAGATGCAATATGAGCAGAAG 60.058 47.826 7.19 3.07 46.36 2.85
122 123 3.564644 GCAGATGCAATATGAGCAGAAGT 59.435 43.478 8.78 0.00 46.36 3.01
123 124 4.036498 GCAGATGCAATATGAGCAGAAGTT 59.964 41.667 8.78 0.00 46.36 2.66
124 125 5.511571 CAGATGCAATATGAGCAGAAGTTG 58.488 41.667 8.78 0.00 46.36 3.16
132 133 3.345808 GCAGAAGTTGCGCCGTGA 61.346 61.111 4.18 0.00 44.09 4.35
133 134 2.551270 CAGAAGTTGCGCCGTGAC 59.449 61.111 4.18 0.00 0.00 3.67
134 135 2.108157 AGAAGTTGCGCCGTGACA 59.892 55.556 4.18 0.00 0.00 3.58
135 136 1.522806 AGAAGTTGCGCCGTGACAA 60.523 52.632 4.18 0.00 0.00 3.18
136 137 1.082756 GAAGTTGCGCCGTGACAAG 60.083 57.895 4.18 0.00 0.00 3.16
137 138 2.443957 GAAGTTGCGCCGTGACAAGG 62.444 60.000 4.18 2.62 0.00 3.61
138 139 2.933878 AAGTTGCGCCGTGACAAGGA 62.934 55.000 12.01 0.00 0.00 3.36
139 140 2.664851 TTGCGCCGTGACAAGGAG 60.665 61.111 12.01 9.27 0.00 3.69
140 141 4.680237 TGCGCCGTGACAAGGAGG 62.680 66.667 12.01 3.23 0.00 4.30
142 143 4.379243 CGCCGTGACAAGGAGGCT 62.379 66.667 12.01 0.00 46.85 4.58
143 144 2.435059 GCCGTGACAAGGAGGCTC 60.435 66.667 12.01 5.78 45.67 4.70
144 145 2.948720 GCCGTGACAAGGAGGCTCT 61.949 63.158 15.23 0.00 45.67 4.09
145 146 1.079543 CCGTGACAAGGAGGCTCTG 60.080 63.158 15.23 8.36 0.00 3.35
146 147 1.739562 CGTGACAAGGAGGCTCTGC 60.740 63.158 15.23 0.00 0.00 4.26
147 148 1.739562 GTGACAAGGAGGCTCTGCG 60.740 63.158 15.23 5.31 0.00 5.18
148 149 2.125350 GACAAGGAGGCTCTGCGG 60.125 66.667 15.23 4.59 0.00 5.69
149 150 4.400961 ACAAGGAGGCTCTGCGGC 62.401 66.667 15.23 0.00 38.75 6.53
158 159 4.479993 CTCTGCGGCTTGGGGAGG 62.480 72.222 0.00 0.00 0.00 4.30
160 161 4.479993 CTGCGGCTTGGGGAGGAG 62.480 72.222 0.00 0.00 0.00 3.69
163 164 3.474570 CGGCTTGGGGAGGAGGAG 61.475 72.222 0.00 0.00 0.00 3.69
164 165 2.285743 GGCTTGGGGAGGAGGAGT 60.286 66.667 0.00 0.00 0.00 3.85
165 166 2.674220 GGCTTGGGGAGGAGGAGTG 61.674 68.421 0.00 0.00 0.00 3.51
166 167 2.993853 CTTGGGGAGGAGGAGTGC 59.006 66.667 0.00 0.00 0.00 4.40
167 168 3.003173 TTGGGGAGGAGGAGTGCG 61.003 66.667 0.00 0.00 0.00 5.34
210 211 3.749064 GCAGCAGACGTCGGAGGA 61.749 66.667 20.25 0.00 0.00 3.71
211 212 2.487428 CAGCAGACGTCGGAGGAG 59.513 66.667 20.25 3.60 0.00 3.69
212 213 2.752238 AGCAGACGTCGGAGGAGG 60.752 66.667 20.25 1.49 0.00 4.30
213 214 4.500116 GCAGACGTCGGAGGAGGC 62.500 72.222 20.25 7.70 0.00 4.70
214 215 2.752238 CAGACGTCGGAGGAGGCT 60.752 66.667 10.41 0.00 0.00 4.58
215 216 2.752238 AGACGTCGGAGGAGGCTG 60.752 66.667 10.46 0.00 0.00 4.85
216 217 4.500116 GACGTCGGAGGAGGCTGC 62.500 72.222 0.00 0.00 0.00 5.25
230 231 2.423446 CTGCCCTGGCGGTCTATC 59.577 66.667 8.91 0.00 45.51 2.08
231 232 2.364973 TGCCCTGGCGGTCTATCA 60.365 61.111 3.32 0.00 45.51 2.15
232 233 1.971505 CTGCCCTGGCGGTCTATCAA 61.972 60.000 8.91 0.00 45.51 2.57
233 234 1.227674 GCCCTGGCGGTCTATCAAG 60.228 63.158 0.00 0.00 0.00 3.02
234 235 1.227674 CCCTGGCGGTCTATCAAGC 60.228 63.158 0.00 0.00 0.00 4.01
239 240 2.104331 CGGTCTATCAAGCCGCGT 59.896 61.111 4.92 0.00 36.24 6.01
240 241 1.518572 CGGTCTATCAAGCCGCGTT 60.519 57.895 4.92 0.00 36.24 4.84
241 242 1.480219 CGGTCTATCAAGCCGCGTTC 61.480 60.000 4.92 0.00 36.24 3.95
242 243 1.480219 GGTCTATCAAGCCGCGTTCG 61.480 60.000 4.92 0.00 0.00 3.95
269 270 3.090532 GGCCTCCCCCGTCTTCAT 61.091 66.667 0.00 0.00 0.00 2.57
270 271 2.680370 GGCCTCCCCCGTCTTCATT 61.680 63.158 0.00 0.00 0.00 2.57
271 272 1.452108 GCCTCCCCCGTCTTCATTG 60.452 63.158 0.00 0.00 0.00 2.82
272 273 1.910580 GCCTCCCCCGTCTTCATTGA 61.911 60.000 0.00 0.00 0.00 2.57
273 274 0.107654 CCTCCCCCGTCTTCATTGAC 60.108 60.000 0.00 0.00 0.00 3.18
274 275 0.107654 CTCCCCCGTCTTCATTGACC 60.108 60.000 0.00 0.00 33.70 4.02
275 276 0.546747 TCCCCCGTCTTCATTGACCT 60.547 55.000 0.00 0.00 33.70 3.85
276 277 0.107654 CCCCCGTCTTCATTGACCTC 60.108 60.000 0.00 0.00 33.70 3.85
277 278 0.460284 CCCCGTCTTCATTGACCTCG 60.460 60.000 0.00 0.00 33.70 4.63
278 279 0.246635 CCCGTCTTCATTGACCTCGT 59.753 55.000 0.00 0.00 33.70 4.18
279 280 1.630148 CCGTCTTCATTGACCTCGTC 58.370 55.000 0.00 0.00 33.70 4.20
280 281 1.260206 CGTCTTCATTGACCTCGTCG 58.740 55.000 0.00 0.00 34.95 5.12
281 282 1.630148 GTCTTCATTGACCTCGTCGG 58.370 55.000 0.00 0.00 34.95 4.79
282 283 0.530744 TCTTCATTGACCTCGTCGGG 59.469 55.000 0.00 0.00 34.95 5.14
283 284 1.079405 TTCATTGACCTCGTCGGGC 60.079 57.895 0.00 0.00 43.30 6.13
310 311 3.723348 GACGACGGCAAGGGCAAC 61.723 66.667 0.00 0.00 43.71 4.17
316 317 4.662961 GGCAAGGGCAACGGCAAC 62.663 66.667 0.00 0.00 43.71 4.17
328 329 4.362476 GGCAACGGCAAGGGCAAG 62.362 66.667 0.00 0.00 43.71 4.01
329 330 3.294493 GCAACGGCAAGGGCAAGA 61.294 61.111 0.00 0.00 43.71 3.02
330 331 2.644992 CAACGGCAAGGGCAAGAC 59.355 61.111 0.00 0.00 43.71 3.01
331 332 2.192861 CAACGGCAAGGGCAAGACA 61.193 57.895 0.00 0.00 43.71 3.41
332 333 1.898574 AACGGCAAGGGCAAGACAG 60.899 57.895 0.00 0.00 43.71 3.51
333 334 2.281761 CGGCAAGGGCAAGACAGT 60.282 61.111 0.00 0.00 43.71 3.55
334 335 2.328099 CGGCAAGGGCAAGACAGTC 61.328 63.158 0.00 0.00 43.71 3.51
335 336 1.073897 GGCAAGGGCAAGACAGTCT 59.926 57.895 0.00 0.00 43.71 3.24
336 337 0.324943 GGCAAGGGCAAGACAGTCTA 59.675 55.000 2.64 0.00 43.71 2.59
337 338 1.443802 GCAAGGGCAAGACAGTCTAC 58.556 55.000 2.64 0.00 40.72 2.59
338 339 1.002544 GCAAGGGCAAGACAGTCTACT 59.997 52.381 2.64 0.00 40.72 2.57
339 340 2.233922 GCAAGGGCAAGACAGTCTACTA 59.766 50.000 2.64 0.00 40.72 1.82
340 341 3.306780 GCAAGGGCAAGACAGTCTACTAA 60.307 47.826 2.64 0.00 40.72 2.24
341 342 4.499183 CAAGGGCAAGACAGTCTACTAAG 58.501 47.826 2.64 0.00 0.00 2.18
342 343 3.100671 AGGGCAAGACAGTCTACTAAGG 58.899 50.000 2.64 0.00 0.00 2.69
343 344 2.418884 GGGCAAGACAGTCTACTAAGGC 60.419 54.545 2.64 4.46 0.00 4.35
344 345 2.233922 GGCAAGACAGTCTACTAAGGCA 59.766 50.000 2.64 0.00 0.00 4.75
345 346 3.516615 GCAAGACAGTCTACTAAGGCAG 58.483 50.000 2.64 0.00 0.00 4.85
346 347 3.516615 CAAGACAGTCTACTAAGGCAGC 58.483 50.000 2.64 0.00 0.00 5.25
347 348 2.808919 AGACAGTCTACTAAGGCAGCA 58.191 47.619 0.00 0.00 0.00 4.41
348 349 3.370104 AGACAGTCTACTAAGGCAGCAT 58.630 45.455 0.00 0.00 0.00 3.79
349 350 3.131933 AGACAGTCTACTAAGGCAGCATG 59.868 47.826 0.00 0.00 40.87 4.06
360 361 2.901840 CAGCATGCGGGCGGTTAT 60.902 61.111 13.01 0.00 39.27 1.89
361 362 2.124320 AGCATGCGGGCGGTTATT 60.124 55.556 13.01 0.00 39.27 1.40
362 363 1.147376 AGCATGCGGGCGGTTATTA 59.853 52.632 13.01 0.00 39.27 0.98
363 364 0.884704 AGCATGCGGGCGGTTATTAG 60.885 55.000 13.01 0.00 39.27 1.73
364 365 1.164041 GCATGCGGGCGGTTATTAGT 61.164 55.000 0.00 0.00 0.00 2.24
365 366 1.305201 CATGCGGGCGGTTATTAGTT 58.695 50.000 0.00 0.00 0.00 2.24
366 367 1.673920 CATGCGGGCGGTTATTAGTTT 59.326 47.619 0.00 0.00 0.00 2.66
367 368 1.088306 TGCGGGCGGTTATTAGTTTG 58.912 50.000 0.00 0.00 0.00 2.93
368 369 1.089112 GCGGGCGGTTATTAGTTTGT 58.911 50.000 0.00 0.00 0.00 2.83
369 370 1.469703 GCGGGCGGTTATTAGTTTGTT 59.530 47.619 0.00 0.00 0.00 2.83
370 371 2.095110 GCGGGCGGTTATTAGTTTGTTT 60.095 45.455 0.00 0.00 0.00 2.83
371 372 3.612241 GCGGGCGGTTATTAGTTTGTTTT 60.612 43.478 0.00 0.00 0.00 2.43
372 373 4.548494 CGGGCGGTTATTAGTTTGTTTTT 58.452 39.130 0.00 0.00 0.00 1.94
373 374 5.697826 CGGGCGGTTATTAGTTTGTTTTTA 58.302 37.500 0.00 0.00 0.00 1.52
374 375 6.148264 CGGGCGGTTATTAGTTTGTTTTTAA 58.852 36.000 0.00 0.00 0.00 1.52
375 376 6.640092 CGGGCGGTTATTAGTTTGTTTTTAAA 59.360 34.615 0.00 0.00 0.00 1.52
376 377 7.168804 CGGGCGGTTATTAGTTTGTTTTTAAAA 59.831 33.333 0.00 0.00 0.00 1.52
377 378 8.824781 GGGCGGTTATTAGTTTGTTTTTAAAAA 58.175 29.630 9.31 9.31 0.00 1.94
402 403 9.594478 AAATTTAGTTGTTTAAGTGGACTTTGG 57.406 29.630 0.00 0.00 37.40 3.28
403 404 4.649088 AGTTGTTTAAGTGGACTTTGGC 57.351 40.909 0.00 0.00 37.40 4.52
404 405 3.383505 AGTTGTTTAAGTGGACTTTGGCC 59.616 43.478 0.00 0.00 37.40 5.36
405 406 1.950909 TGTTTAAGTGGACTTTGGCCG 59.049 47.619 0.00 0.00 37.40 6.13
406 407 1.268625 GTTTAAGTGGACTTTGGCCGG 59.731 52.381 0.00 0.00 37.40 6.13
407 408 0.891904 TTAAGTGGACTTTGGCCGGC 60.892 55.000 21.18 21.18 37.40 6.13
408 409 2.757980 TAAGTGGACTTTGGCCGGCC 62.758 60.000 39.40 39.40 37.40 6.13
409 410 4.966787 GTGGACTTTGGCCGGCCA 62.967 66.667 44.23 44.23 45.63 5.36
410 411 3.978193 TGGACTTTGGCCGGCCAT 61.978 61.111 46.94 33.92 46.64 4.40
411 412 2.679996 GGACTTTGGCCGGCCATT 60.680 61.111 46.94 33.38 46.64 3.16
412 413 2.282783 GGACTTTGGCCGGCCATTT 61.283 57.895 46.94 33.01 46.64 2.32
413 414 0.968393 GGACTTTGGCCGGCCATTTA 60.968 55.000 46.94 31.37 46.64 1.40
414 415 1.111277 GACTTTGGCCGGCCATTTAT 58.889 50.000 46.94 31.76 46.64 1.40
415 416 0.823460 ACTTTGGCCGGCCATTTATG 59.177 50.000 46.94 33.40 46.64 1.90
416 417 0.823460 CTTTGGCCGGCCATTTATGT 59.177 50.000 46.94 0.00 46.64 2.29
417 418 2.028130 CTTTGGCCGGCCATTTATGTA 58.972 47.619 46.94 28.92 46.64 2.29
418 419 2.373335 TTGGCCGGCCATTTATGTAT 57.627 45.000 46.94 0.00 46.64 2.29
419 420 3.510531 TTGGCCGGCCATTTATGTATA 57.489 42.857 46.94 27.31 46.64 1.47
420 421 3.510531 TGGCCGGCCATTTATGTATAA 57.489 42.857 44.23 17.60 41.89 0.98
421 422 3.150767 TGGCCGGCCATTTATGTATAAC 58.849 45.455 44.23 13.60 41.89 1.89
422 423 2.490509 GGCCGGCCATTTATGTATAACC 59.509 50.000 40.73 6.51 35.81 2.85
423 424 2.160813 GCCGGCCATTTATGTATAACCG 59.839 50.000 18.11 0.00 39.11 4.44
424 425 2.160813 CCGGCCATTTATGTATAACCGC 59.839 50.000 2.24 0.00 38.10 5.68
425 426 3.071479 CGGCCATTTATGTATAACCGCT 58.929 45.455 2.24 0.00 32.10 5.52
426 427 3.120338 CGGCCATTTATGTATAACCGCTG 60.120 47.826 2.24 0.00 32.10 5.18
427 428 3.190535 GGCCATTTATGTATAACCGCTGG 59.809 47.826 0.00 0.00 0.00 4.85
428 429 3.190535 GCCATTTATGTATAACCGCTGGG 59.809 47.826 0.00 0.00 40.11 4.45
429 430 3.190535 CCATTTATGTATAACCGCTGGGC 59.809 47.826 0.00 0.00 36.48 5.36
446 447 3.063704 CGCATCTGCTGGCCCAAA 61.064 61.111 0.00 0.00 39.32 3.28
447 448 2.420568 CGCATCTGCTGGCCCAAAT 61.421 57.895 0.00 0.00 39.32 2.32
448 449 1.143183 GCATCTGCTGGCCCAAATG 59.857 57.895 0.00 0.00 38.21 2.32
449 450 1.324740 GCATCTGCTGGCCCAAATGA 61.325 55.000 0.00 0.00 38.21 2.57
450 451 1.187974 CATCTGCTGGCCCAAATGAA 58.812 50.000 0.00 0.00 0.00 2.57
451 452 1.551430 CATCTGCTGGCCCAAATGAAA 59.449 47.619 0.00 0.00 0.00 2.69
452 453 1.714541 TCTGCTGGCCCAAATGAAAA 58.285 45.000 0.00 0.00 0.00 2.29
453 454 2.045524 TCTGCTGGCCCAAATGAAAAA 58.954 42.857 0.00 0.00 0.00 1.94
454 455 2.638855 TCTGCTGGCCCAAATGAAAAAT 59.361 40.909 0.00 0.00 0.00 1.82
455 456 3.004862 CTGCTGGCCCAAATGAAAAATC 58.995 45.455 0.00 0.00 0.00 2.17
456 457 2.371179 TGCTGGCCCAAATGAAAAATCA 59.629 40.909 0.00 0.00 0.00 2.57
457 458 3.004862 GCTGGCCCAAATGAAAAATCAG 58.995 45.455 0.00 0.00 0.00 2.90
458 459 3.306919 GCTGGCCCAAATGAAAAATCAGA 60.307 43.478 0.00 0.00 0.00 3.27
459 460 4.624604 GCTGGCCCAAATGAAAAATCAGAT 60.625 41.667 0.00 0.00 0.00 2.90
460 461 4.834534 TGGCCCAAATGAAAAATCAGATG 58.165 39.130 0.00 0.00 0.00 2.90
461 462 3.624410 GGCCCAAATGAAAAATCAGATGC 59.376 43.478 0.00 0.00 0.00 3.91
462 463 3.307782 GCCCAAATGAAAAATCAGATGCG 59.692 43.478 0.00 0.00 0.00 4.73
463 464 3.307782 CCCAAATGAAAAATCAGATGCGC 59.692 43.478 0.00 0.00 0.00 6.09
464 465 3.927758 CCAAATGAAAAATCAGATGCGCA 59.072 39.130 14.96 14.96 0.00 6.09
465 466 4.569162 CCAAATGAAAAATCAGATGCGCAT 59.431 37.500 25.66 25.66 0.00 4.73
466 467 5.489335 CAAATGAAAAATCAGATGCGCATG 58.511 37.500 30.76 17.00 0.00 4.06
467 468 3.853831 TGAAAAATCAGATGCGCATGT 57.146 38.095 30.76 22.95 0.00 3.21
468 469 3.761657 TGAAAAATCAGATGCGCATGTC 58.238 40.909 30.76 16.10 0.00 3.06
469 470 2.857592 AAAATCAGATGCGCATGTCC 57.142 45.000 30.76 14.02 0.00 4.02
470 471 1.753930 AAATCAGATGCGCATGTCCA 58.246 45.000 30.76 13.09 0.00 4.02
471 472 1.977056 AATCAGATGCGCATGTCCAT 58.023 45.000 30.76 14.93 0.00 3.41
472 473 1.520494 ATCAGATGCGCATGTCCATC 58.480 50.000 30.76 13.53 38.45 3.51
473 474 0.466963 TCAGATGCGCATGTCCATCT 59.533 50.000 30.76 15.94 46.67 2.90
474 475 3.002277 AGATGCGCATGTCCATCTG 57.998 52.632 30.76 0.00 44.68 2.90
475 476 0.534427 AGATGCGCATGTCCATCTGG 60.534 55.000 30.76 0.00 44.68 3.86
476 477 2.126417 GATGCGCATGTCCATCTGGC 62.126 60.000 30.76 4.98 35.96 4.85
477 478 3.589881 GCGCATGTCCATCTGGCC 61.590 66.667 0.30 0.00 34.44 5.36
478 479 3.274586 CGCATGTCCATCTGGCCG 61.275 66.667 0.00 0.00 34.44 6.13
479 480 2.190313 GCATGTCCATCTGGCCGA 59.810 61.111 0.00 0.00 34.44 5.54
480 481 1.228063 GCATGTCCATCTGGCCGAT 60.228 57.895 0.00 0.60 34.44 4.18
481 482 1.233285 GCATGTCCATCTGGCCGATC 61.233 60.000 0.00 0.00 34.44 3.69
482 483 0.604780 CATGTCCATCTGGCCGATCC 60.605 60.000 0.00 0.00 34.44 3.36
483 484 1.056125 ATGTCCATCTGGCCGATCCA 61.056 55.000 0.00 1.53 44.18 3.41
484 485 1.271127 TGTCCATCTGGCCGATCCAA 61.271 55.000 0.00 0.00 46.01 3.53
485 486 0.107214 GTCCATCTGGCCGATCCAAA 60.107 55.000 0.00 0.00 46.01 3.28
486 487 0.107214 TCCATCTGGCCGATCCAAAC 60.107 55.000 0.00 0.00 46.01 2.93
487 488 0.394216 CCATCTGGCCGATCCAAACA 60.394 55.000 0.00 0.00 46.01 2.83
488 489 1.462616 CATCTGGCCGATCCAAACAA 58.537 50.000 0.00 0.00 46.01 2.83
489 490 1.818060 CATCTGGCCGATCCAAACAAA 59.182 47.619 0.00 0.00 46.01 2.83
490 491 1.243902 TCTGGCCGATCCAAACAAAC 58.756 50.000 0.00 0.00 46.01 2.93
491 492 0.109781 CTGGCCGATCCAAACAAACG 60.110 55.000 0.00 0.00 46.01 3.60
492 493 0.535328 TGGCCGATCCAAACAAACGA 60.535 50.000 0.00 0.00 43.21 3.85
493 494 0.594110 GGCCGATCCAAACAAACGAA 59.406 50.000 0.00 0.00 34.01 3.85
494 495 1.001158 GGCCGATCCAAACAAACGAAA 60.001 47.619 0.00 0.00 34.01 3.46
495 496 2.544069 GGCCGATCCAAACAAACGAAAA 60.544 45.455 0.00 0.00 34.01 2.29
496 497 2.724174 GCCGATCCAAACAAACGAAAAG 59.276 45.455 0.00 0.00 0.00 2.27
497 498 2.724174 CCGATCCAAACAAACGAAAAGC 59.276 45.455 0.00 0.00 0.00 3.51
498 499 3.367607 CGATCCAAACAAACGAAAAGCA 58.632 40.909 0.00 0.00 0.00 3.91
499 500 3.421888 CGATCCAAACAAACGAAAAGCAG 59.578 43.478 0.00 0.00 0.00 4.24
500 501 4.606961 GATCCAAACAAACGAAAAGCAGA 58.393 39.130 0.00 0.00 0.00 4.26
501 502 3.765026 TCCAAACAAACGAAAAGCAGAC 58.235 40.909 0.00 0.00 0.00 3.51
502 503 3.191581 TCCAAACAAACGAAAAGCAGACA 59.808 39.130 0.00 0.00 0.00 3.41
503 504 3.923461 CCAAACAAACGAAAAGCAGACAA 59.077 39.130 0.00 0.00 0.00 3.18
504 505 4.387256 CCAAACAAACGAAAAGCAGACAAA 59.613 37.500 0.00 0.00 0.00 2.83
505 506 5.107298 CCAAACAAACGAAAAGCAGACAAAA 60.107 36.000 0.00 0.00 0.00 2.44
506 507 5.509605 AACAAACGAAAAGCAGACAAAAC 57.490 34.783 0.00 0.00 0.00 2.43
507 508 3.606346 ACAAACGAAAAGCAGACAAAACG 59.394 39.130 0.00 0.00 0.00 3.60
508 509 3.481112 AACGAAAAGCAGACAAAACGT 57.519 38.095 0.00 0.00 0.00 3.99
509 510 4.603231 AACGAAAAGCAGACAAAACGTA 57.397 36.364 0.00 0.00 32.66 3.57
510 511 3.931824 ACGAAAAGCAGACAAAACGTAC 58.068 40.909 0.00 0.00 0.00 3.67
511 512 2.955799 CGAAAAGCAGACAAAACGTACG 59.044 45.455 15.01 15.01 0.00 3.67
512 513 3.542680 CGAAAAGCAGACAAAACGTACGT 60.543 43.478 16.72 16.72 0.00 3.57
513 514 4.336932 GAAAAGCAGACAAAACGTACGTT 58.663 39.130 27.15 27.15 40.45 3.99
514 515 3.580794 AAGCAGACAAAACGTACGTTC 57.419 42.857 31.79 20.25 37.35 3.95
515 516 2.542597 AGCAGACAAAACGTACGTTCA 58.457 42.857 31.79 0.00 37.35 3.18
516 517 3.128349 AGCAGACAAAACGTACGTTCAT 58.872 40.909 31.79 21.27 37.35 2.57
517 518 3.558418 AGCAGACAAAACGTACGTTCATT 59.442 39.130 31.79 21.10 37.35 2.57
518 519 3.898361 GCAGACAAAACGTACGTTCATTC 59.102 43.478 31.79 24.88 37.35 2.67
519 520 4.131714 CAGACAAAACGTACGTTCATTCG 58.868 43.478 31.79 19.94 37.35 3.34
520 521 3.182972 AGACAAAACGTACGTTCATTCGG 59.817 43.478 31.79 19.12 37.35 4.30
521 522 2.221517 ACAAAACGTACGTTCATTCGGG 59.778 45.455 31.79 17.91 37.35 5.14
522 523 2.153366 AAACGTACGTTCATTCGGGT 57.847 45.000 31.79 12.63 37.35 5.28
523 524 1.701704 AACGTACGTTCATTCGGGTC 58.298 50.000 27.15 0.00 32.09 4.46
524 525 0.883833 ACGTACGTTCATTCGGGTCT 59.116 50.000 16.72 0.00 34.94 3.85
525 526 1.265568 CGTACGTTCATTCGGGTCTG 58.734 55.000 7.22 0.00 34.94 3.51
526 527 0.997196 GTACGTTCATTCGGGTCTGC 59.003 55.000 0.00 0.00 34.94 4.26
527 528 0.457166 TACGTTCATTCGGGTCTGCG 60.457 55.000 0.00 0.00 34.94 5.18
528 529 2.785258 GTTCATTCGGGTCTGCGC 59.215 61.111 0.00 0.00 0.00 6.09
535 536 3.777925 CGGGTCTGCGCGTTGAAG 61.778 66.667 8.43 0.55 44.50 3.02
536 537 2.665185 GGGTCTGCGCGTTGAAGT 60.665 61.111 8.43 0.00 0.00 3.01
537 538 2.251642 GGGTCTGCGCGTTGAAGTT 61.252 57.895 8.43 0.00 0.00 2.66
538 539 1.082756 GGTCTGCGCGTTGAAGTTG 60.083 57.895 8.43 0.00 0.00 3.16
539 540 1.722507 GTCTGCGCGTTGAAGTTGC 60.723 57.895 8.43 0.00 0.00 4.17
540 541 1.887242 TCTGCGCGTTGAAGTTGCT 60.887 52.632 8.43 0.00 0.00 3.91
541 542 1.439365 CTGCGCGTTGAAGTTGCTC 60.439 57.895 8.43 0.00 0.00 4.26
542 543 1.835483 CTGCGCGTTGAAGTTGCTCT 61.835 55.000 8.43 0.00 0.00 4.09
543 544 0.598942 TGCGCGTTGAAGTTGCTCTA 60.599 50.000 8.43 0.00 0.00 2.43
544 545 0.511221 GCGCGTTGAAGTTGCTCTAA 59.489 50.000 8.43 0.00 0.00 2.10
545 546 1.462541 GCGCGTTGAAGTTGCTCTAAG 60.463 52.381 8.43 0.00 0.00 2.18
546 547 1.462541 CGCGTTGAAGTTGCTCTAAGC 60.463 52.381 0.00 0.00 42.82 3.09
557 558 2.997485 GCTCTAAGCAACCAAACCTG 57.003 50.000 0.00 0.00 41.89 4.00
558 559 2.230660 GCTCTAAGCAACCAAACCTGT 58.769 47.619 0.00 0.00 41.89 4.00
559 560 2.030805 GCTCTAAGCAACCAAACCTGTG 60.031 50.000 0.00 0.00 41.89 3.66
560 561 2.554032 CTCTAAGCAACCAAACCTGTGG 59.446 50.000 0.00 0.00 44.92 4.17
566 567 4.275781 CCAAACCTGTGGTTGGCT 57.724 55.556 2.49 0.00 46.20 4.75
567 568 2.041153 CCAAACCTGTGGTTGGCTC 58.959 57.895 2.49 0.00 46.20 4.70
573 574 2.397597 ACCTGTGGTTGGCTCAAAAAT 58.602 42.857 0.00 0.00 27.29 1.82
581 582 3.312146 GGTTGGCTCAAAAATTGTGGTTG 59.688 43.478 0.00 0.00 0.00 3.77
586 587 4.187694 GCTCAAAAATTGTGGTTGGTTCA 58.812 39.130 0.00 0.00 0.00 3.18
602 603 4.196193 TGGTTCACGTTCAGAAAACTGAT 58.804 39.130 0.00 0.00 32.91 2.90
641 642 3.627577 ACCAATAATTCTGTGTGCCGATC 59.372 43.478 0.00 0.00 0.00 3.69
679 681 2.663279 AAAACAAGATCACGTGTCGC 57.337 45.000 16.51 6.21 37.71 5.19
742 745 4.081030 CGCACCGCACAAGAGCAG 62.081 66.667 0.00 0.00 0.00 4.24
743 746 2.666190 GCACCGCACAAGAGCAGA 60.666 61.111 0.00 0.00 0.00 4.26
744 747 2.675056 GCACCGCACAAGAGCAGAG 61.675 63.158 0.00 0.00 0.00 3.35
745 748 2.358003 ACCGCACAAGAGCAGAGC 60.358 61.111 0.00 0.00 0.00 4.09
758 775 1.350351 AGCAGAGCCAGTTGATCAGTT 59.650 47.619 0.00 0.00 0.00 3.16
760 777 2.873245 GCAGAGCCAGTTGATCAGTTGA 60.873 50.000 9.41 0.00 0.00 3.18
800 820 3.535962 CCTCCGCCCTCTGCTCTC 61.536 72.222 0.00 0.00 38.05 3.20
801 821 2.441901 CTCCGCCCTCTGCTCTCT 60.442 66.667 0.00 0.00 38.05 3.10
946 1121 8.873215 TTCAGTTCCATCGATTCTCTAATTAC 57.127 34.615 0.00 0.00 0.00 1.89
1012 1194 2.225467 GCCAGAGGATGCCATTAACTC 58.775 52.381 0.00 0.00 0.00 3.01
1039 1221 2.488545 TGCTCTTTCCTCTCGACACTAC 59.511 50.000 0.00 0.00 0.00 2.73
1055 1240 5.399604 ACACTACGTTTTTCAAGCAGTAC 57.600 39.130 0.00 0.00 0.00 2.73
1105 1392 5.815581 TGTGAGGCATTACAATAAGGACTT 58.184 37.500 0.00 0.00 0.00 3.01
1106 1393 6.953101 TGTGAGGCATTACAATAAGGACTTA 58.047 36.000 0.00 0.00 0.00 2.24
1107 1394 6.821665 TGTGAGGCATTACAATAAGGACTTAC 59.178 38.462 4.56 4.56 0.00 2.34
1108 1395 7.048512 GTGAGGCATTACAATAAGGACTTACT 58.951 38.462 4.34 0.00 0.00 2.24
1109 1396 7.011482 GTGAGGCATTACAATAAGGACTTACTG 59.989 40.741 4.34 0.00 0.00 2.74
1156 1530 7.692908 TTTTCTGTAAAGAAAAAGGAATGCG 57.307 32.000 16.89 0.00 42.59 4.73
1233 1608 4.892655 TGCTTGTCGCGATGTAATTTTAG 58.107 39.130 14.06 0.84 43.27 1.85
1264 1639 3.793797 TTGGATGAGCAATTGAGCATG 57.206 42.857 10.34 0.00 36.85 4.06
1265 1640 2.730382 TGGATGAGCAATTGAGCATGT 58.270 42.857 10.34 0.00 36.85 3.21
1268 1643 3.318275 GGATGAGCAATTGAGCATGTGAT 59.682 43.478 10.34 0.00 36.85 3.06
1269 1644 4.517832 GGATGAGCAATTGAGCATGTGATA 59.482 41.667 10.34 0.00 36.85 2.15
1270 1645 5.183331 GGATGAGCAATTGAGCATGTGATAT 59.817 40.000 10.34 0.00 36.85 1.63
1271 1646 5.432885 TGAGCAATTGAGCATGTGATATG 57.567 39.130 10.34 0.00 36.85 1.78
1275 1650 7.879160 TGAGCAATTGAGCATGTGATATGTATA 59.121 33.333 10.34 0.00 36.85 1.47
1302 1677 3.964688 AGGATGACGGTTGTATGTATGGA 59.035 43.478 0.00 0.00 0.00 3.41
1304 1679 3.153676 TGACGGTTGTATGTATGGACG 57.846 47.619 0.00 0.00 0.00 4.79
1305 1680 2.492881 TGACGGTTGTATGTATGGACGT 59.507 45.455 0.00 0.00 35.89 4.34
1308 1683 4.613944 ACGGTTGTATGTATGGACGTATG 58.386 43.478 0.00 0.00 29.78 2.39
1309 1684 3.985279 CGGTTGTATGTATGGACGTATGG 59.015 47.826 0.00 0.00 29.78 2.74
1310 1685 4.500205 CGGTTGTATGTATGGACGTATGGT 60.500 45.833 0.00 0.00 29.78 3.55
1311 1686 4.986659 GGTTGTATGTATGGACGTATGGTC 59.013 45.833 0.00 0.00 45.31 4.02
1737 2113 3.778075 TGCTCTAGTAATTACCAGCCCAA 59.222 43.478 20.82 7.40 0.00 4.12
1925 2467 5.587043 CCGTCTCTAAGTTAGACAGACAGAT 59.413 44.000 22.44 0.00 42.91 2.90
2429 2976 9.975218 AATTCTGTTACTATATTCACCAAAGGT 57.025 29.630 0.00 0.00 35.62 3.50
2430 2977 9.975218 ATTCTGTTACTATATTCACCAAAGGTT 57.025 29.630 0.00 0.00 31.02 3.50
2431 2978 9.802039 TTCTGTTACTATATTCACCAAAGGTTT 57.198 29.630 0.00 0.00 31.02 3.27
2432 2979 9.802039 TCTGTTACTATATTCACCAAAGGTTTT 57.198 29.630 0.00 0.00 31.02 2.43
2442 2989 7.519032 TTCACCAAAGGTTTTACTATCAAGG 57.481 36.000 0.00 0.00 31.02 3.61
2443 2990 6.607019 TCACCAAAGGTTTTACTATCAAGGT 58.393 36.000 0.00 0.00 31.02 3.50
2444 2991 6.488683 TCACCAAAGGTTTTACTATCAAGGTG 59.511 38.462 0.00 0.00 42.11 4.00
2445 2992 5.773176 ACCAAAGGTTTTACTATCAAGGTGG 59.227 40.000 0.00 0.00 27.29 4.61
2446 2993 5.185056 CCAAAGGTTTTACTATCAAGGTGGG 59.815 44.000 0.00 0.00 0.00 4.61
2447 2994 5.853572 AAGGTTTTACTATCAAGGTGGGA 57.146 39.130 0.00 0.00 0.00 4.37
2448 2995 5.853572 AGGTTTTACTATCAAGGTGGGAA 57.146 39.130 0.00 0.00 0.00 3.97
2449 2996 6.208840 AGGTTTTACTATCAAGGTGGGAAA 57.791 37.500 0.00 0.00 0.00 3.13
2450 2997 6.616577 AGGTTTTACTATCAAGGTGGGAAAA 58.383 36.000 0.00 0.00 0.00 2.29
2451 2998 7.070629 AGGTTTTACTATCAAGGTGGGAAAAA 58.929 34.615 0.00 0.00 0.00 1.94
2490 3037 3.936203 GGGGACCGTGTCTGCACA 61.936 66.667 4.41 0.00 45.50 4.57
2491 3038 2.347490 GGGACCGTGTCTGCACAT 59.653 61.111 4.41 0.00 45.50 3.21
2492 3039 1.594833 GGGACCGTGTCTGCACATA 59.405 57.895 4.41 0.00 45.50 2.29
2493 3040 0.460284 GGGACCGTGTCTGCACATAG 60.460 60.000 4.41 0.00 45.50 2.23
2494 3041 0.246635 GGACCGTGTCTGCACATAGT 59.753 55.000 4.41 0.00 45.50 2.12
2495 3042 1.475280 GGACCGTGTCTGCACATAGTA 59.525 52.381 4.41 0.00 45.50 1.82
2496 3043 2.094390 GGACCGTGTCTGCACATAGTAA 60.094 50.000 4.41 0.00 45.50 2.24
2497 3044 2.921754 GACCGTGTCTGCACATAGTAAC 59.078 50.000 0.00 0.00 45.50 2.50
2498 3045 2.268298 CCGTGTCTGCACATAGTAACC 58.732 52.381 0.00 0.00 45.50 2.85
2499 3046 1.917955 CGTGTCTGCACATAGTAACCG 59.082 52.381 0.00 0.00 45.50 4.44
2500 3047 2.670229 CGTGTCTGCACATAGTAACCGT 60.670 50.000 0.00 0.00 45.50 4.83
2501 3048 3.323243 GTGTCTGCACATAGTAACCGTT 58.677 45.455 0.00 0.00 44.64 4.44
2502 3049 3.744426 GTGTCTGCACATAGTAACCGTTT 59.256 43.478 0.00 0.00 44.64 3.60
2503 3050 4.212636 GTGTCTGCACATAGTAACCGTTTT 59.787 41.667 0.00 0.00 44.64 2.43
2504 3051 5.406175 GTGTCTGCACATAGTAACCGTTTTA 59.594 40.000 0.00 0.00 44.64 1.52
2505 3052 5.990386 TGTCTGCACATAGTAACCGTTTTAA 59.010 36.000 0.00 0.00 0.00 1.52
2506 3053 6.651643 TGTCTGCACATAGTAACCGTTTTAAT 59.348 34.615 0.00 0.00 0.00 1.40
2507 3054 7.173562 TGTCTGCACATAGTAACCGTTTTAATT 59.826 33.333 0.00 0.00 0.00 1.40
2508 3055 7.691050 GTCTGCACATAGTAACCGTTTTAATTC 59.309 37.037 0.00 0.00 0.00 2.17
2509 3056 7.604927 TCTGCACATAGTAACCGTTTTAATTCT 59.395 33.333 0.00 0.00 0.00 2.40
2510 3057 8.774890 TGCACATAGTAACCGTTTTAATTCTA 57.225 30.769 0.00 0.00 0.00 2.10
2511 3058 9.386010 TGCACATAGTAACCGTTTTAATTCTAT 57.614 29.630 0.00 0.00 0.00 1.98
2543 3090 8.888579 ATATACCAAAAGAGTTTACGATCAGG 57.111 34.615 0.00 0.00 0.00 3.86
2544 3091 4.969484 ACCAAAAGAGTTTACGATCAGGT 58.031 39.130 0.00 0.00 0.00 4.00
2545 3092 4.755123 ACCAAAAGAGTTTACGATCAGGTG 59.245 41.667 0.00 0.00 0.00 4.00
2546 3093 4.154195 CCAAAAGAGTTTACGATCAGGTGG 59.846 45.833 0.00 0.00 0.00 4.61
2547 3094 4.884668 AAAGAGTTTACGATCAGGTGGA 57.115 40.909 0.00 0.00 0.00 4.02
2548 3095 4.884668 AAGAGTTTACGATCAGGTGGAA 57.115 40.909 0.00 0.00 0.00 3.53
2549 3096 5.422214 AAGAGTTTACGATCAGGTGGAAT 57.578 39.130 0.00 0.00 0.00 3.01
2550 3097 6.540438 AAGAGTTTACGATCAGGTGGAATA 57.460 37.500 0.00 0.00 0.00 1.75
2551 3098 6.540438 AGAGTTTACGATCAGGTGGAATAA 57.460 37.500 0.00 0.00 0.00 1.40
2552 3099 6.942976 AGAGTTTACGATCAGGTGGAATAAA 58.057 36.000 0.00 0.00 0.00 1.40
2553 3100 7.391620 AGAGTTTACGATCAGGTGGAATAAAA 58.608 34.615 0.00 0.00 0.00 1.52
2554 3101 7.881232 AGAGTTTACGATCAGGTGGAATAAAAA 59.119 33.333 0.00 0.00 0.00 1.94
2572 3119 4.616181 AAAAATCGTTGATTAGGCCGAG 57.384 40.909 0.00 0.00 31.46 4.63
2573 3120 2.981859 AATCGTTGATTAGGCCGAGT 57.018 45.000 0.00 0.00 29.72 4.18
2574 3121 2.225068 ATCGTTGATTAGGCCGAGTG 57.775 50.000 0.00 0.00 32.26 3.51
2575 3122 1.179152 TCGTTGATTAGGCCGAGTGA 58.821 50.000 0.00 0.00 0.00 3.41
2576 3123 1.135199 TCGTTGATTAGGCCGAGTGAC 60.135 52.381 0.00 0.00 0.00 3.67
2577 3124 1.653151 GTTGATTAGGCCGAGTGACC 58.347 55.000 0.00 0.00 0.00 4.02
2578 3125 0.539986 TTGATTAGGCCGAGTGACCC 59.460 55.000 0.00 0.00 0.00 4.46
2579 3126 0.616395 TGATTAGGCCGAGTGACCCA 60.616 55.000 0.00 0.00 0.00 4.51
2580 3127 0.759346 GATTAGGCCGAGTGACCCAT 59.241 55.000 0.00 0.00 0.00 4.00
2581 3128 0.469917 ATTAGGCCGAGTGACCCATG 59.530 55.000 0.00 0.00 0.00 3.66
2582 3129 2.252072 TTAGGCCGAGTGACCCATGC 62.252 60.000 0.00 0.00 0.00 4.06
2584 3131 4.451150 GCCGAGTGACCCATGCGA 62.451 66.667 0.00 0.00 0.00 5.10
2585 3132 2.501128 CCGAGTGACCCATGCGAT 59.499 61.111 0.00 0.00 0.00 4.58
2586 3133 1.592669 CCGAGTGACCCATGCGATC 60.593 63.158 0.00 0.00 0.00 3.69
2587 3134 1.439228 CGAGTGACCCATGCGATCT 59.561 57.895 0.00 0.00 0.00 2.75
2588 3135 0.873312 CGAGTGACCCATGCGATCTG 60.873 60.000 0.00 0.00 0.00 2.90
2589 3136 0.531532 GAGTGACCCATGCGATCTGG 60.532 60.000 0.00 0.00 0.00 3.86
2590 3137 2.182842 GTGACCCATGCGATCTGGC 61.183 63.158 0.00 0.00 32.08 4.85
2591 3138 2.592861 GACCCATGCGATCTGGCC 60.593 66.667 0.00 0.00 32.08 5.36
2592 3139 4.552365 ACCCATGCGATCTGGCCG 62.552 66.667 0.00 0.00 32.08 6.13
2594 3141 4.240103 CCATGCGATCTGGCCGGA 62.240 66.667 18.80 18.80 0.00 5.14
2595 3142 2.664185 CATGCGATCTGGCCGGAG 60.664 66.667 21.28 8.52 0.00 4.63
2596 3143 4.615815 ATGCGATCTGGCCGGAGC 62.616 66.667 20.33 20.33 38.76 4.70
2599 3146 3.592814 CGATCTGGCCGGAGCGTA 61.593 66.667 37.70 8.32 39.77 4.42
2600 3147 2.920645 CGATCTGGCCGGAGCGTAT 61.921 63.158 37.70 14.34 39.77 3.06
2601 3148 1.583495 CGATCTGGCCGGAGCGTATA 61.583 60.000 37.70 6.70 39.77 1.47
2602 3149 0.601558 GATCTGGCCGGAGCGTATAA 59.398 55.000 21.28 0.00 41.24 0.98
2603 3150 1.204941 GATCTGGCCGGAGCGTATAAT 59.795 52.381 21.28 0.00 41.24 1.28
2604 3151 1.045407 TCTGGCCGGAGCGTATAATT 58.955 50.000 11.27 0.00 41.24 1.40
2605 3152 2.241160 TCTGGCCGGAGCGTATAATTA 58.759 47.619 11.27 0.00 41.24 1.40
2606 3153 2.230508 TCTGGCCGGAGCGTATAATTAG 59.769 50.000 11.27 0.00 41.24 1.73
2607 3154 1.337447 TGGCCGGAGCGTATAATTAGC 60.337 52.381 5.05 0.00 41.24 3.09
2608 3155 1.337447 GGCCGGAGCGTATAATTAGCA 60.337 52.381 5.05 0.00 41.24 3.49
2609 3156 2.618053 GCCGGAGCGTATAATTAGCAT 58.382 47.619 5.05 0.00 0.00 3.79
2610 3157 3.000727 GCCGGAGCGTATAATTAGCATT 58.999 45.455 5.05 0.00 0.00 3.56
2611 3158 3.062234 GCCGGAGCGTATAATTAGCATTC 59.938 47.826 5.05 0.00 0.00 2.67
2612 3159 4.495422 CCGGAGCGTATAATTAGCATTCT 58.505 43.478 0.00 0.00 0.00 2.40
2613 3160 4.327357 CCGGAGCGTATAATTAGCATTCTG 59.673 45.833 0.00 0.00 0.00 3.02
2614 3161 4.201628 CGGAGCGTATAATTAGCATTCTGC 60.202 45.833 0.00 0.00 45.46 4.26
2623 3170 2.823147 GCATTCTGCGCTCAGGCT 60.823 61.111 9.73 0.00 40.69 4.58
2624 3171 2.821688 GCATTCTGCGCTCAGGCTC 61.822 63.158 9.73 0.00 40.69 4.70
2625 3172 1.449070 CATTCTGCGCTCAGGCTCA 60.449 57.895 9.73 0.00 40.69 4.26
2626 3173 1.449246 ATTCTGCGCTCAGGCTCAC 60.449 57.895 9.73 0.00 40.69 3.51
2627 3174 1.897225 ATTCTGCGCTCAGGCTCACT 61.897 55.000 9.73 0.00 40.69 3.41
2628 3175 2.047465 CTGCGCTCAGGCTCACTT 60.047 61.111 9.73 0.00 36.68 3.16
2629 3176 1.670406 CTGCGCTCAGGCTCACTTT 60.670 57.895 9.73 0.00 36.68 2.66
2630 3177 0.390340 CTGCGCTCAGGCTCACTTTA 60.390 55.000 9.73 0.00 36.68 1.85
2631 3178 0.390340 TGCGCTCAGGCTCACTTTAG 60.390 55.000 9.73 0.00 36.09 1.85
2632 3179 1.700600 GCGCTCAGGCTCACTTTAGC 61.701 60.000 0.00 0.00 41.99 3.09
2633 3180 1.416813 CGCTCAGGCTCACTTTAGCG 61.417 60.000 0.00 0.00 46.37 4.26
2634 3181 1.700600 GCTCAGGCTCACTTTAGCGC 61.701 60.000 0.00 0.00 43.74 5.92
2635 3182 1.079127 TCAGGCTCACTTTAGCGCC 60.079 57.895 2.29 0.00 43.74 6.53
2636 3183 1.375908 CAGGCTCACTTTAGCGCCA 60.376 57.895 2.29 0.00 44.85 5.69
2637 3184 1.376037 AGGCTCACTTTAGCGCCAC 60.376 57.895 2.29 0.00 44.85 5.01
2638 3185 2.399356 GGCTCACTTTAGCGCCACC 61.399 63.158 2.29 0.00 43.74 4.61
2639 3186 2.740714 GCTCACTTTAGCGCCACCG 61.741 63.158 2.29 0.00 31.76 4.94
2845 3392 3.323403 TGACCTGGCCCAAACAATTTAAG 59.677 43.478 0.00 0.00 0.00 1.85
2846 3393 2.637382 ACCTGGCCCAAACAATTTAAGG 59.363 45.455 0.00 0.00 0.00 2.69
2857 3404 2.041216 ACAATTTAAGGGAGAGCGGGTT 59.959 45.455 0.00 0.00 0.00 4.11
2915 3596 9.573133 CAGTGTTCTTCTTAAACATTTTTCTGT 57.427 29.630 0.00 0.00 38.75 3.41
3067 3752 4.607336 CGACTCGAAGATCGACAGAGTATG 60.607 50.000 13.35 7.89 44.82 2.39
3076 3764 2.901192 TCGACAGAGTATGGGTTGGAAA 59.099 45.455 0.00 0.00 0.00 3.13
3100 3788 4.777896 TGTATCTACCAGGATTATGAGGGC 59.222 45.833 0.00 0.00 0.00 5.19
3190 3878 5.310409 TGAACTTCTCAAGATTCCCTGTT 57.690 39.130 0.00 0.00 0.00 3.16
3200 3920 7.890127 TCTCAAGATTCCCTGTTAAAATGTCAT 59.110 33.333 0.00 0.00 0.00 3.06
3242 3966 3.500680 ACGAATGTGTGCGTATTTCCTTT 59.499 39.130 0.00 0.00 39.21 3.11
3513 4276 5.452078 TTGTTGTGAGGGCTAAAATTCTG 57.548 39.130 0.00 0.00 0.00 3.02
3623 4387 2.108700 GCGCCATTTAAATGCTACGTG 58.891 47.619 24.54 17.92 35.08 4.49
3637 4401 1.204704 CTACGTGCATTGTCTCTGGGA 59.795 52.381 0.00 0.00 0.00 4.37
3794 4558 7.328737 TGCACAAAGTTGTAAAATACGTGTTTT 59.671 29.630 23.61 23.61 39.91 2.43
3812 4576 5.121454 GTGTTTTTGGTCATCAAACTTGCAA 59.879 36.000 0.00 0.00 44.20 4.08
4221 4990 0.386113 GGCTCGACTATGTGACCTCC 59.614 60.000 0.00 0.00 0.00 4.30
4223 4992 1.066303 GCTCGACTATGTGACCTCCTG 59.934 57.143 0.00 0.00 0.00 3.86
4256 5025 2.574824 ACTAAGATTACCACCGGGCTTT 59.425 45.455 6.32 0.00 37.90 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.796312 ATTTCCTACGCACACGCAAG 59.204 50.000 0.00 0.00 45.53 4.01
2 3 1.231221 AAATTTCCTACGCACACGCA 58.769 45.000 0.00 0.00 45.53 5.24
20 21 6.956202 TGGGGAACGTAGTAATTTCAAAAA 57.044 33.333 0.00 0.00 45.00 1.94
21 22 6.320672 TGTTGGGGAACGTAGTAATTTCAAAA 59.679 34.615 0.00 0.00 45.00 2.44
22 23 5.826737 TGTTGGGGAACGTAGTAATTTCAAA 59.173 36.000 0.00 0.00 45.00 2.69
23 24 5.239087 GTGTTGGGGAACGTAGTAATTTCAA 59.761 40.000 0.00 0.00 45.00 2.69
24 25 4.756135 GTGTTGGGGAACGTAGTAATTTCA 59.244 41.667 0.00 0.00 45.00 2.69
25 26 4.154737 GGTGTTGGGGAACGTAGTAATTTC 59.845 45.833 0.00 0.00 45.00 2.17
26 27 4.074259 GGTGTTGGGGAACGTAGTAATTT 58.926 43.478 0.00 0.00 45.00 1.82
27 28 3.328637 AGGTGTTGGGGAACGTAGTAATT 59.671 43.478 0.00 0.00 45.00 1.40
28 29 2.908351 AGGTGTTGGGGAACGTAGTAAT 59.092 45.455 0.00 0.00 45.00 1.89
29 30 2.328319 AGGTGTTGGGGAACGTAGTAA 58.672 47.619 0.00 0.00 45.00 2.24
30 31 2.014010 AGGTGTTGGGGAACGTAGTA 57.986 50.000 0.00 0.00 45.00 1.82
31 32 3.549878 TCAAGGTGTTGGGGAACGTAGT 61.550 50.000 0.00 0.00 36.81 2.73
32 33 1.071071 TCAAGGTGTTGGGGAACGTAG 59.929 52.381 0.00 0.00 34.09 3.51
33 34 1.071071 CTCAAGGTGTTGGGGAACGTA 59.929 52.381 0.00 0.00 34.09 3.57
34 35 0.179029 CTCAAGGTGTTGGGGAACGT 60.179 55.000 0.00 0.00 34.09 3.99
35 36 1.515521 GCTCAAGGTGTTGGGGAACG 61.516 60.000 0.00 0.00 34.32 3.95
36 37 1.515521 CGCTCAAGGTGTTGGGGAAC 61.516 60.000 0.00 0.00 34.32 3.62
37 38 1.228124 CGCTCAAGGTGTTGGGGAA 60.228 57.895 0.00 0.00 34.32 3.97
38 39 2.429930 CGCTCAAGGTGTTGGGGA 59.570 61.111 0.00 0.00 34.32 4.81
39 40 3.365265 GCGCTCAAGGTGTTGGGG 61.365 66.667 0.00 0.00 34.32 4.96
40 41 2.281761 AGCGCTCAAGGTGTTGGG 60.282 61.111 2.64 0.00 37.19 4.12
41 42 2.620112 CCAGCGCTCAAGGTGTTGG 61.620 63.158 7.13 0.00 46.96 3.77
42 43 1.165907 TTCCAGCGCTCAAGGTGTTG 61.166 55.000 7.13 0.00 37.88 3.33
43 44 0.886490 CTTCCAGCGCTCAAGGTGTT 60.886 55.000 7.13 0.00 37.88 3.32
44 45 1.302033 CTTCCAGCGCTCAAGGTGT 60.302 57.895 7.13 0.00 37.88 4.16
45 46 2.037136 CCTTCCAGCGCTCAAGGTG 61.037 63.158 26.85 14.99 39.16 4.00
46 47 2.348998 CCTTCCAGCGCTCAAGGT 59.651 61.111 26.85 0.00 33.24 3.50
47 48 3.130160 GCCTTCCAGCGCTCAAGG 61.130 66.667 29.30 29.30 39.91 3.61
48 49 2.359107 TGCCTTCCAGCGCTCAAG 60.359 61.111 7.13 12.98 34.65 3.02
49 50 2.669569 GTGCCTTCCAGCGCTCAA 60.670 61.111 7.13 1.84 40.17 3.02
50 51 3.939939 TGTGCCTTCCAGCGCTCA 61.940 61.111 7.13 0.00 43.73 4.26
51 52 3.426568 GTGTGCCTTCCAGCGCTC 61.427 66.667 7.13 0.00 43.73 5.03
52 53 3.946201 AGTGTGCCTTCCAGCGCT 61.946 61.111 2.64 2.64 43.73 5.92
53 54 3.730761 CAGTGTGCCTTCCAGCGC 61.731 66.667 0.00 0.00 43.65 5.92
54 55 3.052082 CCAGTGTGCCTTCCAGCG 61.052 66.667 0.00 0.00 34.65 5.18
55 56 3.368571 GCCAGTGTGCCTTCCAGC 61.369 66.667 0.00 0.00 0.00 4.85
56 57 1.673665 GAGCCAGTGTGCCTTCCAG 60.674 63.158 0.59 0.00 0.00 3.86
57 58 2.431683 GAGCCAGTGTGCCTTCCA 59.568 61.111 0.59 0.00 0.00 3.53
58 59 2.743928 CGAGCCAGTGTGCCTTCC 60.744 66.667 0.59 0.00 0.00 3.46
59 60 2.029844 GACGAGCCAGTGTGCCTTC 61.030 63.158 0.00 0.00 0.00 3.46
60 61 2.031163 GACGAGCCAGTGTGCCTT 59.969 61.111 0.00 0.00 0.00 4.35
61 62 4.363990 CGACGAGCCAGTGTGCCT 62.364 66.667 0.00 0.00 0.00 4.75
62 63 4.664677 ACGACGAGCCAGTGTGCC 62.665 66.667 0.00 0.00 0.00 5.01
63 64 3.406361 CACGACGAGCCAGTGTGC 61.406 66.667 0.00 0.00 0.00 4.57
64 65 2.734723 CCACGACGAGCCAGTGTG 60.735 66.667 0.00 0.00 34.34 3.82
65 66 2.910479 TCCACGACGAGCCAGTGT 60.910 61.111 0.00 0.00 34.34 3.55
66 67 2.126307 CTCCACGACGAGCCAGTG 60.126 66.667 0.00 0.00 35.79 3.66
67 68 3.374402 CCTCCACGACGAGCCAGT 61.374 66.667 0.00 0.00 0.00 4.00
68 69 4.135153 CCCTCCACGACGAGCCAG 62.135 72.222 0.00 0.00 0.00 4.85
80 81 4.410400 CTCACCGTTGGCCCCTCC 62.410 72.222 0.00 0.00 0.00 4.30
87 88 3.958147 ATCTGCCGCTCACCGTTGG 62.958 63.158 0.00 0.00 34.38 3.77
88 89 2.434884 ATCTGCCGCTCACCGTTG 60.435 61.111 0.00 0.00 34.38 4.10
89 90 2.434884 CATCTGCCGCTCACCGTT 60.435 61.111 0.00 0.00 34.38 4.44
92 93 0.815213 TATTGCATCTGCCGCTCACC 60.815 55.000 0.00 0.00 41.18 4.02
93 94 1.069432 CATATTGCATCTGCCGCTCAC 60.069 52.381 0.00 0.00 41.18 3.51
94 95 1.202675 TCATATTGCATCTGCCGCTCA 60.203 47.619 0.00 0.00 41.18 4.26
95 96 1.463831 CTCATATTGCATCTGCCGCTC 59.536 52.381 0.00 0.00 41.18 5.03
96 97 1.520494 CTCATATTGCATCTGCCGCT 58.480 50.000 0.00 0.00 41.18 5.52
97 98 0.109873 GCTCATATTGCATCTGCCGC 60.110 55.000 0.00 0.00 41.18 6.53
98 99 1.197036 CTGCTCATATTGCATCTGCCG 59.803 52.381 0.00 0.00 39.86 5.69
99 100 2.501261 TCTGCTCATATTGCATCTGCC 58.499 47.619 0.00 0.00 39.86 4.85
100 101 3.564644 ACTTCTGCTCATATTGCATCTGC 59.435 43.478 0.00 0.00 39.86 4.26
101 102 5.511571 CAACTTCTGCTCATATTGCATCTG 58.488 41.667 0.00 0.00 39.86 2.90
102 103 5.752892 CAACTTCTGCTCATATTGCATCT 57.247 39.130 0.00 0.00 39.86 2.90
116 117 1.771073 TTGTCACGGCGCAACTTCTG 61.771 55.000 10.83 0.00 0.00 3.02
117 118 1.498865 CTTGTCACGGCGCAACTTCT 61.499 55.000 10.83 0.00 0.00 2.85
118 119 1.082756 CTTGTCACGGCGCAACTTC 60.083 57.895 10.83 0.00 0.00 3.01
119 120 2.542907 CCTTGTCACGGCGCAACTT 61.543 57.895 10.83 0.00 0.00 2.66
120 121 2.972505 CCTTGTCACGGCGCAACT 60.973 61.111 10.83 0.00 0.00 3.16
121 122 2.954753 CTCCTTGTCACGGCGCAAC 61.955 63.158 10.83 5.99 0.00 4.17
122 123 2.664851 CTCCTTGTCACGGCGCAA 60.665 61.111 10.83 2.03 0.00 4.85
123 124 4.680237 CCTCCTTGTCACGGCGCA 62.680 66.667 10.83 0.00 0.00 6.09
125 126 4.379243 AGCCTCCTTGTCACGGCG 62.379 66.667 4.80 4.80 46.85 6.46
126 127 2.435059 GAGCCTCCTTGTCACGGC 60.435 66.667 0.00 0.00 42.79 5.68
127 128 1.079543 CAGAGCCTCCTTGTCACGG 60.080 63.158 0.00 0.00 0.00 4.94
128 129 1.739562 GCAGAGCCTCCTTGTCACG 60.740 63.158 0.00 0.00 0.00 4.35
129 130 1.739562 CGCAGAGCCTCCTTGTCAC 60.740 63.158 0.00 0.00 0.00 3.67
130 131 2.659016 CGCAGAGCCTCCTTGTCA 59.341 61.111 0.00 0.00 0.00 3.58
131 132 2.125350 CCGCAGAGCCTCCTTGTC 60.125 66.667 0.00 0.00 0.00 3.18
132 133 4.400961 GCCGCAGAGCCTCCTTGT 62.401 66.667 0.00 0.00 0.00 3.16
133 134 3.618780 AAGCCGCAGAGCCTCCTTG 62.619 63.158 0.00 0.00 0.00 3.61
134 135 3.325753 AAGCCGCAGAGCCTCCTT 61.326 61.111 0.00 0.00 0.00 3.36
135 136 4.093291 CAAGCCGCAGAGCCTCCT 62.093 66.667 0.00 0.00 0.00 3.69
141 142 4.479993 CCTCCCCAAGCCGCAGAG 62.480 72.222 0.00 0.00 0.00 3.35
143 144 4.479993 CTCCTCCCCAAGCCGCAG 62.480 72.222 0.00 0.00 0.00 5.18
146 147 3.474570 CTCCTCCTCCCCAAGCCG 61.475 72.222 0.00 0.00 0.00 5.52
147 148 2.285743 ACTCCTCCTCCCCAAGCC 60.286 66.667 0.00 0.00 0.00 4.35
148 149 2.993853 CACTCCTCCTCCCCAAGC 59.006 66.667 0.00 0.00 0.00 4.01
149 150 2.993853 GCACTCCTCCTCCCCAAG 59.006 66.667 0.00 0.00 0.00 3.61
150 151 3.003173 CGCACTCCTCCTCCCCAA 61.003 66.667 0.00 0.00 0.00 4.12
193 194 3.691744 CTCCTCCGACGTCTGCTGC 62.692 68.421 14.70 0.00 0.00 5.25
194 195 2.487428 CTCCTCCGACGTCTGCTG 59.513 66.667 14.70 3.65 0.00 4.41
195 196 2.752238 CCTCCTCCGACGTCTGCT 60.752 66.667 14.70 0.00 0.00 4.24
196 197 4.500116 GCCTCCTCCGACGTCTGC 62.500 72.222 14.70 1.16 0.00 4.26
197 198 2.752238 AGCCTCCTCCGACGTCTG 60.752 66.667 14.70 7.40 0.00 3.51
198 199 2.752238 CAGCCTCCTCCGACGTCT 60.752 66.667 14.70 0.00 0.00 4.18
199 200 4.500116 GCAGCCTCCTCCGACGTC 62.500 72.222 5.18 5.18 0.00 4.34
216 217 1.227674 GCTTGATAGACCGCCAGGG 60.228 63.158 0.00 0.00 43.47 4.45
217 218 1.227674 GGCTTGATAGACCGCCAGG 60.228 63.158 0.00 0.00 42.06 4.45
218 219 1.592669 CGGCTTGATAGACCGCCAG 60.593 63.158 0.00 0.00 42.59 4.85
219 220 2.499205 CGGCTTGATAGACCGCCA 59.501 61.111 0.00 0.00 42.59 5.69
223 224 1.480219 CGAACGCGGCTTGATAGACC 61.480 60.000 12.47 0.00 0.00 3.85
224 225 1.917921 CGAACGCGGCTTGATAGAC 59.082 57.895 12.47 0.00 0.00 2.59
225 226 4.395080 CGAACGCGGCTTGATAGA 57.605 55.556 12.47 0.00 0.00 1.98
252 253 2.680370 AATGAAGACGGGGGAGGCC 61.680 63.158 0.00 0.00 0.00 5.19
253 254 1.452108 CAATGAAGACGGGGGAGGC 60.452 63.158 0.00 0.00 0.00 4.70
254 255 0.107654 GTCAATGAAGACGGGGGAGG 60.108 60.000 0.00 0.00 0.00 4.30
255 256 0.107654 GGTCAATGAAGACGGGGGAG 60.108 60.000 0.00 0.00 39.42 4.30
256 257 0.546747 AGGTCAATGAAGACGGGGGA 60.547 55.000 0.00 0.00 39.42 4.81
257 258 0.107654 GAGGTCAATGAAGACGGGGG 60.108 60.000 0.00 0.00 39.42 5.40
258 259 0.460284 CGAGGTCAATGAAGACGGGG 60.460 60.000 0.00 0.00 39.42 5.73
259 260 0.246635 ACGAGGTCAATGAAGACGGG 59.753 55.000 0.00 0.00 39.42 5.28
260 261 1.630148 GACGAGGTCAATGAAGACGG 58.370 55.000 0.00 0.00 39.42 4.79
261 262 1.260206 CGACGAGGTCAATGAAGACG 58.740 55.000 0.00 0.00 39.42 4.18
262 263 1.630148 CCGACGAGGTCAATGAAGAC 58.370 55.000 0.00 0.00 37.80 3.01
263 264 0.530744 CCCGACGAGGTCAATGAAGA 59.469 55.000 0.00 0.00 38.74 2.87
264 265 1.084370 GCCCGACGAGGTCAATGAAG 61.084 60.000 0.00 0.00 38.74 3.02
265 266 1.079405 GCCCGACGAGGTCAATGAA 60.079 57.895 0.00 0.00 38.74 2.57
266 267 2.577059 GCCCGACGAGGTCAATGA 59.423 61.111 0.00 0.00 38.74 2.57
285 286 4.671549 TGCCGTCGTCGTCGTCAC 62.672 66.667 10.76 1.34 38.33 3.67
286 287 3.867226 CTTGCCGTCGTCGTCGTCA 62.867 63.158 10.76 1.18 38.33 4.35
287 288 3.164011 CTTGCCGTCGTCGTCGTC 61.164 66.667 10.76 0.00 38.33 4.20
288 289 4.695231 CCTTGCCGTCGTCGTCGT 62.695 66.667 10.76 0.00 38.33 4.34
293 294 3.723348 GTTGCCCTTGCCGTCGTC 61.723 66.667 0.00 0.00 36.33 4.20
299 300 4.662961 GTTGCCGTTGCCCTTGCC 62.663 66.667 0.00 0.00 36.33 4.52
300 301 4.999939 CGTTGCCGTTGCCCTTGC 63.000 66.667 0.00 0.00 36.33 4.01
301 302 4.341502 CCGTTGCCGTTGCCCTTG 62.342 66.667 0.00 0.00 36.33 3.61
305 306 4.999939 CTTGCCGTTGCCGTTGCC 63.000 66.667 0.00 0.00 36.33 4.52
306 307 4.999939 CCTTGCCGTTGCCGTTGC 63.000 66.667 0.00 0.00 36.33 4.17
307 308 4.341502 CCCTTGCCGTTGCCGTTG 62.342 66.667 0.00 0.00 36.33 4.10
311 312 4.362476 CTTGCCCTTGCCGTTGCC 62.362 66.667 0.00 0.00 36.33 4.52
312 313 3.294493 TCTTGCCCTTGCCGTTGC 61.294 61.111 0.00 0.00 36.33 4.17
313 314 2.133742 CTGTCTTGCCCTTGCCGTTG 62.134 60.000 0.00 0.00 36.33 4.10
314 315 1.898574 CTGTCTTGCCCTTGCCGTT 60.899 57.895 0.00 0.00 36.33 4.44
315 316 2.281761 CTGTCTTGCCCTTGCCGT 60.282 61.111 0.00 0.00 36.33 5.68
316 317 2.281761 ACTGTCTTGCCCTTGCCG 60.282 61.111 0.00 0.00 36.33 5.69
317 318 0.324943 TAGACTGTCTTGCCCTTGCC 59.675 55.000 16.53 0.00 36.33 4.52
318 319 1.002544 AGTAGACTGTCTTGCCCTTGC 59.997 52.381 16.53 0.00 38.26 4.01
319 320 4.499183 CTTAGTAGACTGTCTTGCCCTTG 58.501 47.826 16.53 0.00 0.00 3.61
320 321 3.515901 CCTTAGTAGACTGTCTTGCCCTT 59.484 47.826 16.53 0.00 0.00 3.95
321 322 3.100671 CCTTAGTAGACTGTCTTGCCCT 58.899 50.000 16.53 9.41 0.00 5.19
322 323 2.418884 GCCTTAGTAGACTGTCTTGCCC 60.419 54.545 16.53 2.34 0.00 5.36
323 324 2.233922 TGCCTTAGTAGACTGTCTTGCC 59.766 50.000 16.53 4.80 0.00 4.52
324 325 3.516615 CTGCCTTAGTAGACTGTCTTGC 58.483 50.000 16.53 9.51 0.00 4.01
325 326 3.056536 TGCTGCCTTAGTAGACTGTCTTG 60.057 47.826 16.53 2.17 0.00 3.02
326 327 3.165875 TGCTGCCTTAGTAGACTGTCTT 58.834 45.455 16.53 1.09 0.00 3.01
327 328 2.808919 TGCTGCCTTAGTAGACTGTCT 58.191 47.619 15.57 15.57 0.00 3.41
328 329 3.452474 CATGCTGCCTTAGTAGACTGTC 58.548 50.000 0.00 0.00 0.00 3.51
329 330 2.419297 GCATGCTGCCTTAGTAGACTGT 60.419 50.000 11.37 0.00 37.42 3.55
330 331 2.208431 GCATGCTGCCTTAGTAGACTG 58.792 52.381 11.37 0.00 37.42 3.51
331 332 1.202463 CGCATGCTGCCTTAGTAGACT 60.202 52.381 17.13 0.00 41.12 3.24
332 333 1.212616 CGCATGCTGCCTTAGTAGAC 58.787 55.000 17.13 0.00 41.12 2.59
333 334 0.104855 CCGCATGCTGCCTTAGTAGA 59.895 55.000 17.13 0.00 41.12 2.59
334 335 0.882042 CCCGCATGCTGCCTTAGTAG 60.882 60.000 17.13 0.00 41.12 2.57
335 336 1.146041 CCCGCATGCTGCCTTAGTA 59.854 57.895 17.13 0.00 41.12 1.82
336 337 2.124570 CCCGCATGCTGCCTTAGT 60.125 61.111 17.13 0.00 41.12 2.24
337 338 3.589881 GCCCGCATGCTGCCTTAG 61.590 66.667 17.13 0.00 41.12 2.18
343 344 1.163420 TAATAACCGCCCGCATGCTG 61.163 55.000 17.13 9.44 0.00 4.41
344 345 0.884704 CTAATAACCGCCCGCATGCT 60.885 55.000 17.13 0.00 0.00 3.79
345 346 1.164041 ACTAATAACCGCCCGCATGC 61.164 55.000 7.91 7.91 0.00 4.06
346 347 1.305201 AACTAATAACCGCCCGCATG 58.695 50.000 0.00 0.00 0.00 4.06
347 348 1.673920 CAAACTAATAACCGCCCGCAT 59.326 47.619 0.00 0.00 0.00 4.73
348 349 1.088306 CAAACTAATAACCGCCCGCA 58.912 50.000 0.00 0.00 0.00 5.69
349 350 1.089112 ACAAACTAATAACCGCCCGC 58.911 50.000 0.00 0.00 0.00 6.13
350 351 3.835378 AAACAAACTAATAACCGCCCG 57.165 42.857 0.00 0.00 0.00 6.13
351 352 7.943413 TTTAAAAACAAACTAATAACCGCCC 57.057 32.000 0.00 0.00 0.00 6.13
376 377 9.594478 CCAAAGTCCACTTAAACAACTAAATTT 57.406 29.630 0.00 0.00 34.61 1.82
377 378 7.709182 GCCAAAGTCCACTTAAACAACTAAATT 59.291 33.333 0.00 0.00 34.61 1.82
378 379 7.207383 GCCAAAGTCCACTTAAACAACTAAAT 58.793 34.615 0.00 0.00 34.61 1.40
379 380 6.406065 GGCCAAAGTCCACTTAAACAACTAAA 60.406 38.462 0.00 0.00 34.61 1.85
380 381 5.068067 GGCCAAAGTCCACTTAAACAACTAA 59.932 40.000 0.00 0.00 34.61 2.24
381 382 4.581409 GGCCAAAGTCCACTTAAACAACTA 59.419 41.667 0.00 0.00 34.61 2.24
382 383 3.383505 GGCCAAAGTCCACTTAAACAACT 59.616 43.478 0.00 0.00 34.61 3.16
383 384 3.713288 GGCCAAAGTCCACTTAAACAAC 58.287 45.455 0.00 0.00 34.61 3.32
384 385 2.359531 CGGCCAAAGTCCACTTAAACAA 59.640 45.455 2.24 0.00 34.61 2.83
385 386 1.950909 CGGCCAAAGTCCACTTAAACA 59.049 47.619 2.24 0.00 34.61 2.83
386 387 1.268625 CCGGCCAAAGTCCACTTAAAC 59.731 52.381 2.24 0.00 34.61 2.01
387 388 1.611519 CCGGCCAAAGTCCACTTAAA 58.388 50.000 2.24 0.00 34.61 1.52
388 389 0.891904 GCCGGCCAAAGTCCACTTAA 60.892 55.000 18.11 0.00 34.61 1.85
389 390 1.302993 GCCGGCCAAAGTCCACTTA 60.303 57.895 18.11 0.00 34.61 2.24
390 391 2.597510 GCCGGCCAAAGTCCACTT 60.598 61.111 18.11 0.00 37.91 3.16
391 392 4.660938 GGCCGGCCAAAGTCCACT 62.661 66.667 40.73 0.00 35.81 4.00
392 393 4.966787 TGGCCGGCCAAAGTCCAC 62.967 66.667 45.50 16.54 44.12 4.02
401 402 2.490509 GGTTATACATAAATGGCCGGCC 59.509 50.000 39.40 39.40 0.00 6.13
402 403 2.160813 CGGTTATACATAAATGGCCGGC 59.839 50.000 21.18 21.18 34.97 6.13
403 404 2.160813 GCGGTTATACATAAATGGCCGG 59.839 50.000 0.00 0.00 38.52 6.13
404 405 3.071479 AGCGGTTATACATAAATGGCCG 58.929 45.455 0.00 0.00 40.72 6.13
405 406 3.190535 CCAGCGGTTATACATAAATGGCC 59.809 47.826 0.00 0.00 0.00 5.36
406 407 3.190535 CCCAGCGGTTATACATAAATGGC 59.809 47.826 0.00 0.00 0.00 4.40
407 408 3.190535 GCCCAGCGGTTATACATAAATGG 59.809 47.826 0.00 0.00 0.00 3.16
408 409 4.419522 GCCCAGCGGTTATACATAAATG 57.580 45.455 0.00 0.00 0.00 2.32
430 431 1.143183 CATTTGGGCCAGCAGATGC 59.857 57.895 6.23 0.00 42.49 3.91
431 432 1.187974 TTCATTTGGGCCAGCAGATG 58.812 50.000 6.23 10.27 0.00 2.90
432 433 1.941377 TTTCATTTGGGCCAGCAGAT 58.059 45.000 6.23 0.00 0.00 2.90
433 434 1.714541 TTTTCATTTGGGCCAGCAGA 58.285 45.000 6.23 2.77 0.00 4.26
434 435 2.547299 TTTTTCATTTGGGCCAGCAG 57.453 45.000 6.23 0.00 0.00 4.24
435 436 2.371179 TGATTTTTCATTTGGGCCAGCA 59.629 40.909 6.23 0.00 0.00 4.41
436 437 3.004862 CTGATTTTTCATTTGGGCCAGC 58.995 45.455 6.23 0.00 0.00 4.85
437 438 4.540359 TCTGATTTTTCATTTGGGCCAG 57.460 40.909 6.23 0.00 0.00 4.85
438 439 4.834534 CATCTGATTTTTCATTTGGGCCA 58.165 39.130 0.00 0.00 0.00 5.36
439 440 3.624410 GCATCTGATTTTTCATTTGGGCC 59.376 43.478 0.00 0.00 0.00 5.80
440 441 3.307782 CGCATCTGATTTTTCATTTGGGC 59.692 43.478 0.00 0.00 0.00 5.36
441 442 3.307782 GCGCATCTGATTTTTCATTTGGG 59.692 43.478 0.30 0.00 0.00 4.12
442 443 3.927758 TGCGCATCTGATTTTTCATTTGG 59.072 39.130 5.66 0.00 0.00 3.28
443 444 5.062934 ACATGCGCATCTGATTTTTCATTTG 59.937 36.000 22.51 7.47 0.00 2.32
444 445 5.172934 ACATGCGCATCTGATTTTTCATTT 58.827 33.333 22.51 0.00 0.00 2.32
445 446 4.751060 ACATGCGCATCTGATTTTTCATT 58.249 34.783 22.51 0.00 0.00 2.57
446 447 4.357142 GACATGCGCATCTGATTTTTCAT 58.643 39.130 22.51 0.00 0.00 2.57
447 448 3.427909 GGACATGCGCATCTGATTTTTCA 60.428 43.478 22.51 0.00 0.00 2.69
448 449 3.111098 GGACATGCGCATCTGATTTTTC 58.889 45.455 22.51 4.99 0.00 2.29
449 450 2.492881 TGGACATGCGCATCTGATTTTT 59.507 40.909 22.51 0.00 0.00 1.94
450 451 2.093890 TGGACATGCGCATCTGATTTT 58.906 42.857 22.51 0.00 0.00 1.82
451 452 1.753930 TGGACATGCGCATCTGATTT 58.246 45.000 22.51 0.00 0.00 2.17
452 453 1.878088 GATGGACATGCGCATCTGATT 59.122 47.619 22.51 5.58 0.00 2.57
453 454 1.071857 AGATGGACATGCGCATCTGAT 59.928 47.619 22.51 10.12 34.96 2.90
454 455 0.466963 AGATGGACATGCGCATCTGA 59.533 50.000 22.51 5.07 34.96 3.27
455 456 0.586802 CAGATGGACATGCGCATCTG 59.413 55.000 22.51 20.28 41.49 2.90
456 457 0.534427 CCAGATGGACATGCGCATCT 60.534 55.000 22.51 9.50 35.94 2.90
457 458 1.947013 CCAGATGGACATGCGCATC 59.053 57.895 22.51 11.71 37.39 3.91
458 459 2.191513 GCCAGATGGACATGCGCAT 61.192 57.895 19.28 19.28 37.39 4.73
459 460 2.825387 GCCAGATGGACATGCGCA 60.825 61.111 14.96 14.96 37.39 6.09
460 461 3.589881 GGCCAGATGGACATGCGC 61.590 66.667 0.00 0.00 44.76 6.09
461 462 3.274586 CGGCCAGATGGACATGCG 61.275 66.667 2.24 0.00 46.09 4.73
462 463 1.228063 ATCGGCCAGATGGACATGC 60.228 57.895 2.24 0.00 46.09 4.06
463 464 0.604780 GGATCGGCCAGATGGACATG 60.605 60.000 13.68 0.00 46.09 3.21
464 465 1.056125 TGGATCGGCCAGATGGACAT 61.056 55.000 13.68 0.00 46.09 3.06
465 466 1.688884 TGGATCGGCCAGATGGACA 60.689 57.895 13.68 7.97 46.09 4.02
466 467 3.230284 TGGATCGGCCAGATGGAC 58.770 61.111 13.68 0.00 43.33 4.02
474 475 0.594110 TTCGTTTGTTTGGATCGGCC 59.406 50.000 0.00 0.00 37.10 6.13
475 476 2.409152 TTTCGTTTGTTTGGATCGGC 57.591 45.000 0.00 0.00 0.00 5.54
476 477 2.724174 GCTTTTCGTTTGTTTGGATCGG 59.276 45.455 0.00 0.00 0.00 4.18
477 478 3.367607 TGCTTTTCGTTTGTTTGGATCG 58.632 40.909 0.00 0.00 0.00 3.69
478 479 4.441087 GTCTGCTTTTCGTTTGTTTGGATC 59.559 41.667 0.00 0.00 0.00 3.36
479 480 4.142271 TGTCTGCTTTTCGTTTGTTTGGAT 60.142 37.500 0.00 0.00 0.00 3.41
480 481 3.191581 TGTCTGCTTTTCGTTTGTTTGGA 59.808 39.130 0.00 0.00 0.00 3.53
481 482 3.506810 TGTCTGCTTTTCGTTTGTTTGG 58.493 40.909 0.00 0.00 0.00 3.28
482 483 5.508124 TTTGTCTGCTTTTCGTTTGTTTG 57.492 34.783 0.00 0.00 0.00 2.93
483 484 5.387958 CGTTTTGTCTGCTTTTCGTTTGTTT 60.388 36.000 0.00 0.00 0.00 2.83
484 485 4.089351 CGTTTTGTCTGCTTTTCGTTTGTT 59.911 37.500 0.00 0.00 0.00 2.83
485 486 3.606346 CGTTTTGTCTGCTTTTCGTTTGT 59.394 39.130 0.00 0.00 0.00 2.83
486 487 3.606346 ACGTTTTGTCTGCTTTTCGTTTG 59.394 39.130 0.00 0.00 0.00 2.93
487 488 3.828786 ACGTTTTGTCTGCTTTTCGTTT 58.171 36.364 0.00 0.00 0.00 3.60
488 489 3.481112 ACGTTTTGTCTGCTTTTCGTT 57.519 38.095 0.00 0.00 0.00 3.85
489 490 3.542680 CGTACGTTTTGTCTGCTTTTCGT 60.543 43.478 7.22 0.00 0.00 3.85
490 491 2.955799 CGTACGTTTTGTCTGCTTTTCG 59.044 45.455 7.22 0.00 0.00 3.46
491 492 3.931824 ACGTACGTTTTGTCTGCTTTTC 58.068 40.909 16.72 0.00 0.00 2.29
492 493 4.142859 TGAACGTACGTTTTGTCTGCTTTT 60.143 37.500 32.14 7.61 38.60 2.27
493 494 3.371591 TGAACGTACGTTTTGTCTGCTTT 59.628 39.130 32.14 7.82 38.60 3.51
494 495 2.931325 TGAACGTACGTTTTGTCTGCTT 59.069 40.909 32.14 8.38 38.60 3.91
495 496 2.542597 TGAACGTACGTTTTGTCTGCT 58.457 42.857 32.14 9.17 38.60 4.24
496 497 3.515071 ATGAACGTACGTTTTGTCTGC 57.485 42.857 32.14 18.70 38.60 4.26
497 498 4.131714 CGAATGAACGTACGTTTTGTCTG 58.868 43.478 32.14 17.62 38.60 3.51
498 499 3.182972 CCGAATGAACGTACGTTTTGTCT 59.817 43.478 32.14 16.37 38.60 3.41
499 500 3.463127 CCGAATGAACGTACGTTTTGTC 58.537 45.455 32.14 25.06 38.60 3.18
500 501 2.221517 CCCGAATGAACGTACGTTTTGT 59.778 45.455 32.14 20.31 38.60 2.83
501 502 2.221517 ACCCGAATGAACGTACGTTTTG 59.778 45.455 32.14 20.34 38.60 2.44
502 503 2.476241 GACCCGAATGAACGTACGTTTT 59.524 45.455 32.14 23.68 38.60 2.43
503 504 2.061028 GACCCGAATGAACGTACGTTT 58.939 47.619 32.14 18.51 38.60 3.60
504 505 1.270550 AGACCCGAATGAACGTACGTT 59.729 47.619 32.17 32.17 41.54 3.99
505 506 0.883833 AGACCCGAATGAACGTACGT 59.116 50.000 16.72 16.72 0.00 3.57
506 507 1.265568 CAGACCCGAATGAACGTACG 58.734 55.000 15.01 15.01 0.00 3.67
507 508 0.997196 GCAGACCCGAATGAACGTAC 59.003 55.000 0.00 0.00 0.00 3.67
508 509 0.457166 CGCAGACCCGAATGAACGTA 60.457 55.000 0.00 0.00 0.00 3.57
509 510 1.736645 CGCAGACCCGAATGAACGT 60.737 57.895 0.00 0.00 0.00 3.99
510 511 3.081133 CGCAGACCCGAATGAACG 58.919 61.111 0.00 0.00 0.00 3.95
511 512 2.785258 GCGCAGACCCGAATGAAC 59.215 61.111 0.30 0.00 0.00 3.18
512 513 2.813474 CGCGCAGACCCGAATGAA 60.813 61.111 8.75 0.00 0.00 2.57
513 514 3.583276 AACGCGCAGACCCGAATGA 62.583 57.895 5.73 0.00 0.00 2.57
514 515 3.118454 AACGCGCAGACCCGAATG 61.118 61.111 5.73 0.00 0.00 2.67
515 516 3.118454 CAACGCGCAGACCCGAAT 61.118 61.111 5.73 0.00 0.00 3.34
516 517 3.793775 TTCAACGCGCAGACCCGAA 62.794 57.895 5.73 0.00 0.00 4.30
517 518 4.287781 TTCAACGCGCAGACCCGA 62.288 61.111 5.73 0.00 0.00 5.14
518 519 3.777925 CTTCAACGCGCAGACCCG 61.778 66.667 5.73 0.00 0.00 5.28
519 520 2.251642 AACTTCAACGCGCAGACCC 61.252 57.895 5.73 0.00 0.00 4.46
520 521 1.082756 CAACTTCAACGCGCAGACC 60.083 57.895 5.73 0.00 0.00 3.85
521 522 1.722507 GCAACTTCAACGCGCAGAC 60.723 57.895 5.73 0.00 0.00 3.51
522 523 1.831389 GAGCAACTTCAACGCGCAGA 61.831 55.000 5.73 0.13 0.00 4.26
523 524 1.439365 GAGCAACTTCAACGCGCAG 60.439 57.895 5.73 2.42 0.00 5.18
524 525 0.598942 TAGAGCAACTTCAACGCGCA 60.599 50.000 5.73 0.00 0.00 6.09
525 526 0.511221 TTAGAGCAACTTCAACGCGC 59.489 50.000 5.73 0.00 0.00 6.86
526 527 1.462541 GCTTAGAGCAACTTCAACGCG 60.463 52.381 3.53 3.53 41.89 6.01
527 528 2.233738 GCTTAGAGCAACTTCAACGC 57.766 50.000 0.00 0.00 41.89 4.84
538 539 2.030805 CACAGGTTTGGTTGCTTAGAGC 60.031 50.000 0.00 0.00 42.82 4.09
539 540 2.554032 CCACAGGTTTGGTTGCTTAGAG 59.446 50.000 0.00 0.00 0.00 2.43
540 541 2.582052 CCACAGGTTTGGTTGCTTAGA 58.418 47.619 0.00 0.00 0.00 2.10
549 550 0.754957 TGAGCCAACCACAGGTTTGG 60.755 55.000 0.00 5.97 44.33 3.28
550 551 1.110442 TTGAGCCAACCACAGGTTTG 58.890 50.000 0.00 0.00 44.33 2.93
551 552 1.859302 TTTGAGCCAACCACAGGTTT 58.141 45.000 0.00 0.00 44.33 3.27
553 554 1.859302 TTTTTGAGCCAACCACAGGT 58.141 45.000 0.00 0.00 37.65 4.00
554 555 3.132925 CAATTTTTGAGCCAACCACAGG 58.867 45.455 0.00 0.00 0.00 4.00
555 556 3.556775 CACAATTTTTGAGCCAACCACAG 59.443 43.478 0.00 0.00 0.00 3.66
556 557 3.529533 CACAATTTTTGAGCCAACCACA 58.470 40.909 0.00 0.00 0.00 4.17
557 558 2.871633 CCACAATTTTTGAGCCAACCAC 59.128 45.455 0.00 0.00 0.00 4.16
558 559 2.503356 ACCACAATTTTTGAGCCAACCA 59.497 40.909 0.00 0.00 0.00 3.67
559 560 3.192541 ACCACAATTTTTGAGCCAACC 57.807 42.857 0.00 0.00 0.00 3.77
560 561 3.312146 CCAACCACAATTTTTGAGCCAAC 59.688 43.478 0.00 0.00 0.00 3.77
561 562 3.054802 ACCAACCACAATTTTTGAGCCAA 60.055 39.130 0.00 0.00 0.00 4.52
562 563 2.503356 ACCAACCACAATTTTTGAGCCA 59.497 40.909 0.00 0.00 0.00 4.75
563 564 3.192541 ACCAACCACAATTTTTGAGCC 57.807 42.857 0.00 0.00 0.00 4.70
564 565 4.033932 GTGAACCAACCACAATTTTTGAGC 59.966 41.667 0.00 0.00 34.81 4.26
565 566 4.267452 CGTGAACCAACCACAATTTTTGAG 59.733 41.667 0.00 0.00 34.36 3.02
566 567 4.177026 CGTGAACCAACCACAATTTTTGA 58.823 39.130 0.00 0.00 34.36 2.69
567 568 3.929610 ACGTGAACCAACCACAATTTTTG 59.070 39.130 0.00 0.00 34.36 2.44
573 574 1.740585 CTGAACGTGAACCAACCACAA 59.259 47.619 0.00 0.00 34.36 3.33
602 603 7.762588 TTATTGGTTCCCTCGTCAAAATAAA 57.237 32.000 0.00 0.00 0.00 1.40
679 681 4.072088 GGTCGGCGAACAAGCACG 62.072 66.667 21.87 0.00 39.27 5.34
741 744 3.996921 ATCAACTGATCAACTGGCTCT 57.003 42.857 0.00 0.00 0.00 4.09
758 775 3.495983 CCAAAGTGTGGTGGTACAGATCA 60.496 47.826 0.00 0.00 43.20 2.92
760 777 3.140325 CCAAAGTGTGGTGGTACAGAT 57.860 47.619 0.00 0.00 43.20 2.90
904 933 2.434658 GAAAGCCCCGCCACCAAAAG 62.435 60.000 0.00 0.00 0.00 2.27
946 1121 1.445410 TTCAACGAGGCGTCATCCG 60.445 57.895 7.26 0.00 39.99 4.18
1012 1194 2.072298 CGAGAGGAAAGAGCAAACCTG 58.928 52.381 0.00 0.00 32.53 4.00
1039 1221 5.173131 GGAAACATGTACTGCTTGAAAAACG 59.827 40.000 0.00 0.00 0.00 3.60
1055 1240 7.558161 TTACTCTTATGCATCAGGAAACATG 57.442 36.000 0.19 0.00 0.00 3.21
1105 1392 5.187576 ACAGTTAAATACGCCCCTTACAGTA 59.812 40.000 0.00 0.00 0.00 2.74
1106 1393 4.019950 ACAGTTAAATACGCCCCTTACAGT 60.020 41.667 0.00 0.00 0.00 3.55
1107 1394 4.510571 ACAGTTAAATACGCCCCTTACAG 58.489 43.478 0.00 0.00 0.00 2.74
1108 1395 4.556592 ACAGTTAAATACGCCCCTTACA 57.443 40.909 0.00 0.00 0.00 2.41
1109 1396 7.558161 AATTACAGTTAAATACGCCCCTTAC 57.442 36.000 0.00 0.00 0.00 2.34
1155 1529 2.668617 ACAATTGCTATATGCGCACG 57.331 45.000 14.90 2.35 46.63 5.34
1156 1530 4.732285 ACTACAATTGCTATATGCGCAC 57.268 40.909 14.90 0.00 46.63 5.34
1218 1593 5.333798 CCACCATACCTAAAATTACATCGCG 60.334 44.000 0.00 0.00 0.00 5.87
1220 1595 7.562454 AACCACCATACCTAAAATTACATCG 57.438 36.000 0.00 0.00 0.00 3.84
1233 1608 2.024414 GCTCATCCAAACCACCATACC 58.976 52.381 0.00 0.00 0.00 2.73
1264 1639 9.339850 ACCGTCATCCTACTATATACATATCAC 57.660 37.037 0.00 0.00 0.00 3.06
1265 1640 9.916360 AACCGTCATCCTACTATATACATATCA 57.084 33.333 0.00 0.00 0.00 2.15
1269 1644 9.696572 ATACAACCGTCATCCTACTATATACAT 57.303 33.333 0.00 0.00 0.00 2.29
1270 1645 8.953313 CATACAACCGTCATCCTACTATATACA 58.047 37.037 0.00 0.00 0.00 2.29
1271 1646 8.954350 ACATACAACCGTCATCCTACTATATAC 58.046 37.037 0.00 0.00 0.00 1.47
1275 1650 7.093902 CCATACATACAACCGTCATCCTACTAT 60.094 40.741 0.00 0.00 0.00 2.12
1302 1677 0.742990 CCGCCAATGTGACCATACGT 60.743 55.000 0.00 0.00 0.00 3.57
1304 1679 1.299541 CTCCGCCAATGTGACCATAC 58.700 55.000 0.00 0.00 0.00 2.39
1305 1680 0.463654 GCTCCGCCAATGTGACCATA 60.464 55.000 0.00 0.00 0.00 2.74
1308 1683 0.392461 TAAGCTCCGCCAATGTGACC 60.392 55.000 0.00 0.00 0.00 4.02
1309 1684 1.009829 CTAAGCTCCGCCAATGTGAC 58.990 55.000 0.00 0.00 0.00 3.67
1310 1685 0.107703 CCTAAGCTCCGCCAATGTGA 60.108 55.000 0.00 0.00 0.00 3.58
1311 1686 1.718757 GCCTAAGCTCCGCCAATGTG 61.719 60.000 0.00 0.00 35.50 3.21
1315 1690 1.377202 CTTGCCTAAGCTCCGCCAA 60.377 57.895 0.00 0.00 40.80 4.52
1737 2113 5.293560 GCTTTTTAGTCGAGCATAGGATCT 58.706 41.667 0.00 0.00 36.45 2.75
1925 2467 6.824196 TCACCACAATGTGAGTGTTTTTACTA 59.176 34.615 23.88 8.67 40.22 1.82
2403 2950 9.975218 ACCTTTGGTGAATATAGTAACAGAATT 57.025 29.630 0.00 0.00 32.98 2.17
2404 2951 9.975218 AACCTTTGGTGAATATAGTAACAGAAT 57.025 29.630 0.00 0.00 35.34 2.40
2405 2952 9.802039 AAACCTTTGGTGAATATAGTAACAGAA 57.198 29.630 0.00 0.00 35.34 3.02
2406 2953 9.802039 AAAACCTTTGGTGAATATAGTAACAGA 57.198 29.630 0.00 0.00 35.34 3.41
2416 2963 9.238368 CCTTGATAGTAAAACCTTTGGTGAATA 57.762 33.333 0.00 0.00 35.34 1.75
2417 2964 7.728532 ACCTTGATAGTAAAACCTTTGGTGAAT 59.271 33.333 0.00 0.00 35.34 2.57
2418 2965 7.013846 CACCTTGATAGTAAAACCTTTGGTGAA 59.986 37.037 0.00 0.00 41.56 3.18
2419 2966 6.488683 CACCTTGATAGTAAAACCTTTGGTGA 59.511 38.462 0.00 0.00 41.56 4.02
2420 2967 6.294508 CCACCTTGATAGTAAAACCTTTGGTG 60.295 42.308 0.00 0.00 39.54 4.17
2421 2968 5.773176 CCACCTTGATAGTAAAACCTTTGGT 59.227 40.000 0.00 0.00 37.65 3.67
2422 2969 5.185056 CCCACCTTGATAGTAAAACCTTTGG 59.815 44.000 0.00 0.00 0.00 3.28
2423 2970 6.007703 TCCCACCTTGATAGTAAAACCTTTG 58.992 40.000 0.00 0.00 0.00 2.77
2424 2971 6.208840 TCCCACCTTGATAGTAAAACCTTT 57.791 37.500 0.00 0.00 0.00 3.11
2425 2972 5.853572 TCCCACCTTGATAGTAAAACCTT 57.146 39.130 0.00 0.00 0.00 3.50
2426 2973 5.853572 TTCCCACCTTGATAGTAAAACCT 57.146 39.130 0.00 0.00 0.00 3.50
2427 2974 6.904463 TTTTCCCACCTTGATAGTAAAACC 57.096 37.500 0.00 0.00 0.00 3.27
2448 2995 1.864565 GCCAAATCGTGCCACTTTTT 58.135 45.000 0.00 0.00 0.00 1.94
2449 2996 0.318614 CGCCAAATCGTGCCACTTTT 60.319 50.000 0.00 0.00 0.00 2.27
2450 2997 1.285641 CGCCAAATCGTGCCACTTT 59.714 52.632 0.00 0.00 0.00 2.66
2451 2998 2.625823 CCGCCAAATCGTGCCACTT 61.626 57.895 0.00 0.00 0.00 3.16
2452 2999 3.055719 CCGCCAAATCGTGCCACT 61.056 61.111 0.00 0.00 0.00 4.00
2453 3000 3.039202 CTCCGCCAAATCGTGCCAC 62.039 63.158 0.00 0.00 0.00 5.01
2454 3001 2.745884 CTCCGCCAAATCGTGCCA 60.746 61.111 0.00 0.00 0.00 4.92
2455 3002 4.179579 GCTCCGCCAAATCGTGCC 62.180 66.667 0.00 0.00 0.00 5.01
2456 3003 4.520846 CGCTCCGCCAAATCGTGC 62.521 66.667 0.00 0.00 0.00 5.34
2457 3004 3.864686 CCGCTCCGCCAAATCGTG 61.865 66.667 0.00 0.00 0.00 4.35
2460 3007 4.483243 TCCCCGCTCCGCCAAATC 62.483 66.667 0.00 0.00 0.00 2.17
2461 3008 4.796495 GTCCCCGCTCCGCCAAAT 62.796 66.667 0.00 0.00 0.00 2.32
2481 3028 3.671008 AACGGTTACTATGTGCAGACA 57.329 42.857 0.00 0.00 36.22 3.41
2482 3029 6.470557 TTAAAACGGTTACTATGTGCAGAC 57.529 37.500 0.00 0.00 0.00 3.51
2483 3030 7.604927 AGAATTAAAACGGTTACTATGTGCAGA 59.395 33.333 0.00 0.00 0.00 4.26
2484 3031 7.748847 AGAATTAAAACGGTTACTATGTGCAG 58.251 34.615 0.00 0.00 0.00 4.41
2485 3032 7.675962 AGAATTAAAACGGTTACTATGTGCA 57.324 32.000 0.00 0.00 0.00 4.57
2517 3064 9.976511 CCTGATCGTAAACTCTTTTGGTATATA 57.023 33.333 0.00 0.00 0.00 0.86
2518 3065 8.483758 ACCTGATCGTAAACTCTTTTGGTATAT 58.516 33.333 0.00 0.00 0.00 0.86
2519 3066 7.762615 CACCTGATCGTAAACTCTTTTGGTATA 59.237 37.037 0.00 0.00 0.00 1.47
2520 3067 6.594159 CACCTGATCGTAAACTCTTTTGGTAT 59.406 38.462 0.00 0.00 0.00 2.73
2521 3068 5.929992 CACCTGATCGTAAACTCTTTTGGTA 59.070 40.000 0.00 0.00 0.00 3.25
2522 3069 4.755123 CACCTGATCGTAAACTCTTTTGGT 59.245 41.667 0.00 0.00 0.00 3.67
2523 3070 4.154195 CCACCTGATCGTAAACTCTTTTGG 59.846 45.833 0.00 0.00 0.00 3.28
2524 3071 4.994852 TCCACCTGATCGTAAACTCTTTTG 59.005 41.667 0.00 0.00 0.00 2.44
2525 3072 5.223449 TCCACCTGATCGTAAACTCTTTT 57.777 39.130 0.00 0.00 0.00 2.27
2526 3073 4.884668 TCCACCTGATCGTAAACTCTTT 57.115 40.909 0.00 0.00 0.00 2.52
2527 3074 4.884668 TTCCACCTGATCGTAAACTCTT 57.115 40.909 0.00 0.00 0.00 2.85
2528 3075 6.540438 TTATTCCACCTGATCGTAAACTCT 57.460 37.500 0.00 0.00 0.00 3.24
2529 3076 7.605410 TTTTATTCCACCTGATCGTAAACTC 57.395 36.000 0.00 0.00 0.00 3.01
2530 3077 7.989416 TTTTTATTCCACCTGATCGTAAACT 57.011 32.000 0.00 0.00 0.00 2.66
2551 3098 4.007659 ACTCGGCCTAATCAACGATTTTT 58.992 39.130 0.00 0.00 33.95 1.94
2552 3099 3.374058 CACTCGGCCTAATCAACGATTTT 59.626 43.478 0.00 0.00 33.95 1.82
2553 3100 2.936498 CACTCGGCCTAATCAACGATTT 59.064 45.455 0.00 0.00 33.95 2.17
2554 3101 2.167693 TCACTCGGCCTAATCAACGATT 59.832 45.455 0.00 0.00 36.20 3.34
2555 3102 1.754803 TCACTCGGCCTAATCAACGAT 59.245 47.619 0.00 0.00 34.60 3.73
2556 3103 1.135199 GTCACTCGGCCTAATCAACGA 60.135 52.381 0.00 0.00 0.00 3.85
2557 3104 1.278238 GTCACTCGGCCTAATCAACG 58.722 55.000 0.00 0.00 0.00 4.10
2558 3105 1.653151 GGTCACTCGGCCTAATCAAC 58.347 55.000 0.00 0.00 0.00 3.18
2559 3106 0.539986 GGGTCACTCGGCCTAATCAA 59.460 55.000 0.00 0.00 0.00 2.57
2560 3107 0.616395 TGGGTCACTCGGCCTAATCA 60.616 55.000 0.00 0.00 0.00 2.57
2561 3108 0.759346 ATGGGTCACTCGGCCTAATC 59.241 55.000 0.00 0.00 0.00 1.75
2562 3109 0.469917 CATGGGTCACTCGGCCTAAT 59.530 55.000 0.00 0.00 0.00 1.73
2563 3110 1.904771 CATGGGTCACTCGGCCTAA 59.095 57.895 0.00 0.00 0.00 2.69
2564 3111 2.731571 GCATGGGTCACTCGGCCTA 61.732 63.158 0.00 0.00 0.00 3.93
2565 3112 4.101448 GCATGGGTCACTCGGCCT 62.101 66.667 0.00 0.00 0.00 5.19
2567 3114 3.740128 ATCGCATGGGTCACTCGGC 62.740 63.158 9.86 0.00 0.00 5.54
2568 3115 1.592669 GATCGCATGGGTCACTCGG 60.593 63.158 9.86 0.00 0.00 4.63
2569 3116 0.873312 CAGATCGCATGGGTCACTCG 60.873 60.000 9.86 0.00 0.00 4.18
2570 3117 0.531532 CCAGATCGCATGGGTCACTC 60.532 60.000 9.86 3.48 33.94 3.51
2571 3118 1.524002 CCAGATCGCATGGGTCACT 59.476 57.895 9.86 5.18 33.94 3.41
2572 3119 2.182842 GCCAGATCGCATGGGTCAC 61.183 63.158 9.86 3.02 38.33 3.67
2573 3120 2.190313 GCCAGATCGCATGGGTCA 59.810 61.111 9.86 0.00 38.33 4.02
2574 3121 2.592861 GGCCAGATCGCATGGGTC 60.593 66.667 9.86 6.91 38.33 4.46
2575 3122 4.552365 CGGCCAGATCGCATGGGT 62.552 66.667 9.86 0.00 38.33 4.51
2577 3124 4.240103 TCCGGCCAGATCGCATGG 62.240 66.667 2.24 0.00 41.04 3.66
2578 3125 2.664185 CTCCGGCCAGATCGCATG 60.664 66.667 2.24 0.00 0.00 4.06
2579 3126 4.615815 GCTCCGGCCAGATCGCAT 62.616 66.667 2.24 0.00 0.00 4.73
2582 3129 1.583495 TATACGCTCCGGCCAGATCG 61.583 60.000 10.57 10.57 34.44 3.69
2583 3130 0.601558 TTATACGCTCCGGCCAGATC 59.398 55.000 2.24 0.00 34.44 2.75
2584 3131 1.267121 ATTATACGCTCCGGCCAGAT 58.733 50.000 2.24 0.00 34.44 2.90
2585 3132 1.045407 AATTATACGCTCCGGCCAGA 58.955 50.000 2.24 0.00 34.44 3.86
2586 3133 2.607187 CTAATTATACGCTCCGGCCAG 58.393 52.381 2.24 0.00 34.44 4.85
2587 3134 1.337447 GCTAATTATACGCTCCGGCCA 60.337 52.381 2.24 0.00 34.44 5.36
2588 3135 1.337447 TGCTAATTATACGCTCCGGCC 60.337 52.381 0.00 0.00 34.44 6.13
2589 3136 2.074547 TGCTAATTATACGCTCCGGC 57.925 50.000 0.00 0.00 0.00 6.13
2590 3137 4.327357 CAGAATGCTAATTATACGCTCCGG 59.673 45.833 0.00 0.00 0.00 5.14
2591 3138 5.441700 CAGAATGCTAATTATACGCTCCG 57.558 43.478 0.00 0.00 0.00 4.63
2607 3154 1.449070 TGAGCCTGAGCGCAGAATG 60.449 57.895 19.95 3.31 44.45 2.67
2608 3155 2.984623 TGAGCCTGAGCGCAGAAT 59.015 55.556 19.95 6.55 44.45 2.40
2613 3160 1.700600 GCTAAAGTGAGCCTGAGCGC 61.701 60.000 0.00 0.00 46.67 5.92
2614 3161 1.416813 CGCTAAAGTGAGCCTGAGCG 61.417 60.000 0.00 0.00 44.85 5.03
2615 3162 1.700600 GCGCTAAAGTGAGCCTGAGC 61.701 60.000 0.00 0.00 39.43 4.26
2616 3163 1.086634 GGCGCTAAAGTGAGCCTGAG 61.087 60.000 7.64 0.00 45.67 3.35
2617 3164 1.079127 GGCGCTAAAGTGAGCCTGA 60.079 57.895 7.64 0.00 45.67 3.86
2618 3165 3.490890 GGCGCTAAAGTGAGCCTG 58.509 61.111 7.64 0.00 45.67 4.85
2621 3168 2.740714 CGGTGGCGCTAAAGTGAGC 61.741 63.158 7.64 0.00 39.20 4.26
2622 3169 0.108992 TACGGTGGCGCTAAAGTGAG 60.109 55.000 7.64 0.00 0.00 3.51
2623 3170 0.533491 ATACGGTGGCGCTAAAGTGA 59.467 50.000 7.64 0.00 0.00 3.41
2624 3171 2.212869 TATACGGTGGCGCTAAAGTG 57.787 50.000 7.64 0.00 0.00 3.16
2625 3172 4.796038 ATATATACGGTGGCGCTAAAGT 57.204 40.909 7.64 7.53 0.00 2.66
2845 3392 1.452108 CATCCAAACCCGCTCTCCC 60.452 63.158 0.00 0.00 0.00 4.30
2846 3393 0.181350 ATCATCCAAACCCGCTCTCC 59.819 55.000 0.00 0.00 0.00 3.71
2857 3404 2.898612 TGGCTGAGCAAAAATCATCCAA 59.101 40.909 6.82 0.00 39.38 3.53
2915 3596 8.541899 TGACACACATAGGTTAGGATAACATA 57.458 34.615 2.42 0.00 0.00 2.29
3067 3752 4.165372 TCCTGGTAGATACATTTCCAACCC 59.835 45.833 0.00 0.00 0.00 4.11
3076 3764 5.426833 GCCCTCATAATCCTGGTAGATACAT 59.573 44.000 0.00 0.00 0.00 2.29
3200 3920 6.852858 TCGTGTTTCAGTTGTATCAATTCA 57.147 33.333 0.00 0.00 0.00 2.57
3385 4142 1.447945 GCTGAAGAACCTCTTGAGGC 58.552 55.000 15.93 1.78 38.02 4.70
3578 4342 2.689471 GCAGCACCCATGATCAAATGTA 59.311 45.455 0.00 0.00 0.00 2.29
3579 4343 1.479323 GCAGCACCCATGATCAAATGT 59.521 47.619 0.00 0.00 0.00 2.71
3580 4344 1.535226 CGCAGCACCCATGATCAAATG 60.535 52.381 0.00 0.00 0.00 2.32
3581 4345 0.742505 CGCAGCACCCATGATCAAAT 59.257 50.000 0.00 0.00 0.00 2.32
3582 4346 0.322366 TCGCAGCACCCATGATCAAA 60.322 50.000 0.00 0.00 0.00 2.69
3623 4387 7.573968 AAAAAGTATATCCCAGAGACAATGC 57.426 36.000 0.00 0.00 0.00 3.56
3650 4414 5.767665 TGTTGTGTGAAAATAGTACAGGCAT 59.232 36.000 0.00 0.00 0.00 4.40
3707 4471 5.864474 GGTGTATTTACCTCTGATGCTATCG 59.136 44.000 0.00 0.00 37.74 2.92
3794 4558 4.328440 CGTTTTTGCAAGTTTGATGACCAA 59.672 37.500 0.00 0.00 0.00 3.67
3812 4576 6.371809 AATGCGACCATATATGAACGTTTT 57.628 33.333 22.29 16.41 0.00 2.43
3862 4626 0.671796 CCATGCTGGTATGCCACATG 59.328 55.000 24.80 24.80 44.50 3.21
4034 4801 3.782656 AGTTTGTAACCGAACCATCCT 57.217 42.857 0.00 0.00 35.84 3.24
4221 4990 6.312180 GGTAATCTTAGTTAACGTTGACCCAG 59.688 42.308 18.49 14.39 0.00 4.45
4223 4992 6.091305 GTGGTAATCTTAGTTAACGTTGACCC 59.909 42.308 18.49 10.82 0.00 4.46
4256 5025 5.772169 TCCCATTTGATATGTTGTGTTGTCA 59.228 36.000 0.00 0.00 0.00 3.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.