Multiple sequence alignment - TraesCS6A01G111500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G111500 chr6A 100.000 4073 0 0 1 4073 80804320 80808392 0.000000e+00 7522.0
1 TraesCS6A01G111500 chr6D 90.868 1325 77 13 440 1725 63326882 63328201 0.000000e+00 1736.0
2 TraesCS6A01G111500 chr6D 95.159 661 30 2 1735 2394 63328331 63328990 0.000000e+00 1042.0
3 TraesCS6A01G111500 chr6D 91.469 715 50 8 3358 4068 63330295 63331002 0.000000e+00 972.0
4 TraesCS6A01G111500 chr6D 90.642 716 58 7 2349 3061 63328982 63329691 0.000000e+00 942.0
5 TraesCS6A01G111500 chr6D 90.598 117 10 1 3 118 130273356 130273472 1.960000e-33 154.0
6 TraesCS6A01G111500 chr6D 93.878 49 3 0 340 388 63325109 63325157 1.570000e-09 75.0
7 TraesCS6A01G111500 chr6B 92.667 1091 52 9 660 1725 136792934 136794021 0.000000e+00 1546.0
8 TraesCS6A01G111500 chr6B 86.005 1179 133 19 2349 3502 136795739 136796910 0.000000e+00 1234.0
9 TraesCS6A01G111500 chr6B 95.000 660 33 0 1735 2394 136795088 136795747 0.000000e+00 1037.0
10 TraesCS6A01G111500 chr6B 95.305 426 14 3 977 1396 136794362 136794787 0.000000e+00 671.0
11 TraesCS6A01G111500 chr6B 87.398 492 24 19 3583 4068 136796916 136797375 7.750000e-147 531.0
12 TraesCS6A01G111500 chr6B 91.775 231 19 0 1735 1965 136794135 136794365 5.080000e-84 322.0
13 TraesCS6A01G111500 chr6B 91.477 176 12 1 1553 1725 136794799 136794974 5.260000e-59 239.0
14 TraesCS6A01G111500 chr6B 84.810 79 5 5 612 690 125470563 125470492 5.650000e-09 73.1
15 TraesCS6A01G111500 chr1D 82.540 441 46 21 519 944 3760705 3761129 3.870000e-95 359.0
16 TraesCS6A01G111500 chr1D 81.818 462 52 21 519 965 3799517 3799961 3.870000e-95 359.0
17 TraesCS6A01G111500 chr1D 90.594 202 18 1 115 316 272549043 272549243 2.410000e-67 267.0
18 TraesCS6A01G111500 chr1D 91.453 117 9 1 3 118 89757262 89757378 4.210000e-35 159.0
19 TraesCS6A01G111500 chr1D 91.453 117 9 1 3 118 286391094 286391210 4.210000e-35 159.0
20 TraesCS6A01G111500 chr1D 90.598 117 10 1 3 118 14632360 14632476 1.960000e-33 154.0
21 TraesCS6A01G111500 chr1D 90.909 44 2 2 793 836 393439911 393439952 1.580000e-04 58.4
22 TraesCS6A01G111500 chr5A 96.500 200 7 0 119 318 343048632 343048433 8.440000e-87 331.0
23 TraesCS6A01G111500 chr5A 90.594 202 19 0 112 313 573964682 573964481 6.710000e-68 268.0
24 TraesCS6A01G111500 chr5A 85.253 217 24 7 554 765 599395550 599395337 2.470000e-52 217.0
25 TraesCS6A01G111500 chr5A 84.848 99 7 6 610 708 598891790 598891880 4.330000e-15 93.5
26 TraesCS6A01G111500 chr5A 100.000 29 0 0 793 821 599395236 599395208 2.000000e-03 54.7
27 TraesCS6A01G111500 chr2B 90.865 208 19 0 109 316 202376837 202377044 3.100000e-71 279.0
28 TraesCS6A01G111500 chr2B 90.865 208 19 0 109 316 202399036 202399243 3.100000e-71 279.0
29 TraesCS6A01G111500 chr2B 90.598 117 10 1 3 118 670841152 670841036 1.960000e-33 154.0
30 TraesCS6A01G111500 chr3B 91.414 198 17 0 119 316 227430733 227430930 5.190000e-69 272.0
31 TraesCS6A01G111500 chr3B 91.327 196 17 0 121 316 716462785 716462590 6.710000e-68 268.0
32 TraesCS6A01G111500 chr1A 91.414 198 16 1 119 316 530234329 530234525 1.870000e-68 270.0
33 TraesCS6A01G111500 chr1A 100.000 30 0 0 793 822 492200353 492200324 5.690000e-04 56.5
34 TraesCS6A01G111500 chr3A 90.196 204 20 0 113 316 159413912 159413709 2.410000e-67 267.0
35 TraesCS6A01G111500 chr3A 89.916 119 11 1 1 118 217839014 217838896 7.050000e-33 152.0
36 TraesCS6A01G111500 chr1B 86.829 205 22 4 3204 3404 31827143 31827346 1.470000e-54 224.0
37 TraesCS6A01G111500 chr5D 83.902 205 23 6 568 765 480496420 480496219 1.930000e-43 187.0
38 TraesCS6A01G111500 chr5D 91.453 117 9 1 3 118 490163722 490163606 4.210000e-35 159.0
39 TraesCS6A01G111500 chr5D 90.598 117 10 1 3 118 5112213 5112329 1.960000e-33 154.0
40 TraesCS6A01G111500 chr5D 79.605 152 13 12 559 704 480422491 480422630 4.330000e-15 93.5
41 TraesCS6A01G111500 chr5D 100.000 29 0 0 793 821 480496077 480496049 2.000000e-03 54.7
42 TraesCS6A01G111500 chr4A 90.598 117 10 1 3 118 346750740 346750624 1.960000e-33 154.0
43 TraesCS6A01G111500 chr5B 100.000 29 0 0 793 821 588693255 588693227 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G111500 chr6A 80804320 80808392 4072 False 7522.000000 7522 100.000000 1 4073 1 chr6A.!!$F1 4072
1 TraesCS6A01G111500 chr6D 63325109 63331002 5893 False 953.400000 1736 92.403200 340 4068 5 chr6D.!!$F2 3728
2 TraesCS6A01G111500 chr6B 136792934 136797375 4441 False 797.142857 1546 91.375286 660 4068 7 chr6B.!!$F1 3408

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
782 2475 0.106918 TTTCTCGCTGGTGGTTTGGT 60.107 50.0 0.0 0.0 0.00 3.67 F
2547 5386 0.175760 TAGATTGCTCTCACACCGGC 59.824 55.0 0.0 0.0 32.66 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2762 5601 0.033228 GGCTGCATCTATGACGAGCT 59.967 55.0 0.5 0.0 0.0 4.09 R
3442 6630 0.310854 GACACTTCCAAAACTGCGGG 59.689 55.0 0.0 0.0 0.0 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 8.484641 TTTTTAGACATTTCAAATGCACAACA 57.515 26.923 10.21 0.00 0.00 3.33
28 29 8.484641 TTTTAGACATTTCAAATGCACAACAA 57.515 26.923 10.21 0.00 0.00 2.83
29 30 5.971895 AGACATTTCAAATGCACAACAAC 57.028 34.783 10.21 0.00 0.00 3.32
30 31 5.417811 AGACATTTCAAATGCACAACAACA 58.582 33.333 10.21 0.00 0.00 3.33
31 32 6.050432 AGACATTTCAAATGCACAACAACAT 58.950 32.000 10.21 0.00 0.00 2.71
32 33 7.208777 AGACATTTCAAATGCACAACAACATA 58.791 30.769 10.21 0.00 0.00 2.29
33 34 7.169645 AGACATTTCAAATGCACAACAACATAC 59.830 33.333 10.21 0.00 0.00 2.39
34 35 5.879948 TTTCAAATGCACAACAACATACG 57.120 34.783 0.00 0.00 0.00 3.06
35 36 3.894920 TCAAATGCACAACAACATACGG 58.105 40.909 0.00 0.00 0.00 4.02
36 37 3.565902 TCAAATGCACAACAACATACGGA 59.434 39.130 0.00 0.00 0.00 4.69
37 38 4.217334 TCAAATGCACAACAACATACGGAT 59.783 37.500 0.00 0.00 0.00 4.18
38 39 3.763097 ATGCACAACAACATACGGATG 57.237 42.857 5.94 5.94 39.16 3.51
40 41 3.665190 TGCACAACAACATACGGATGTA 58.335 40.909 15.10 0.00 45.93 2.29
41 42 4.257731 TGCACAACAACATACGGATGTAT 58.742 39.130 15.10 2.23 45.93 2.29
42 43 5.420409 TGCACAACAACATACGGATGTATA 58.580 37.500 15.10 0.00 45.93 1.47
43 44 6.052360 TGCACAACAACATACGGATGTATAT 58.948 36.000 15.10 0.00 45.93 0.86
44 45 7.210873 TGCACAACAACATACGGATGTATATA 58.789 34.615 15.10 0.00 45.93 0.86
45 46 7.383843 TGCACAACAACATACGGATGTATATAG 59.616 37.037 15.10 6.17 45.93 1.31
46 47 7.597369 GCACAACAACATACGGATGTATATAGA 59.403 37.037 15.10 0.00 45.93 1.98
47 48 8.912658 CACAACAACATACGGATGTATATAGAC 58.087 37.037 15.10 0.00 45.93 2.59
48 49 8.635328 ACAACAACATACGGATGTATATAGACA 58.365 33.333 15.10 2.07 45.93 3.41
49 50 9.639601 CAACAACATACGGATGTATATAGACAT 57.360 33.333 15.10 12.70 45.93 3.06
78 79 9.953565 TTACAGTATAGGTTCACTTAATTTGCT 57.046 29.630 0.00 0.00 0.00 3.91
79 80 8.494016 ACAGTATAGGTTCACTTAATTTGCTC 57.506 34.615 0.00 0.00 0.00 4.26
80 81 7.553044 ACAGTATAGGTTCACTTAATTTGCTCC 59.447 37.037 0.00 0.00 0.00 4.70
81 82 6.761714 AGTATAGGTTCACTTAATTTGCTCCG 59.238 38.462 0.00 0.00 0.00 4.63
82 83 3.751518 AGGTTCACTTAATTTGCTCCGT 58.248 40.909 0.00 0.00 0.00 4.69
83 84 4.901868 AGGTTCACTTAATTTGCTCCGTA 58.098 39.130 0.00 0.00 0.00 4.02
84 85 5.497474 AGGTTCACTTAATTTGCTCCGTAT 58.503 37.500 0.00 0.00 0.00 3.06
85 86 6.646267 AGGTTCACTTAATTTGCTCCGTATA 58.354 36.000 0.00 0.00 0.00 1.47
86 87 7.280356 AGGTTCACTTAATTTGCTCCGTATAT 58.720 34.615 0.00 0.00 0.00 0.86
87 88 8.426489 AGGTTCACTTAATTTGCTCCGTATATA 58.574 33.333 0.00 0.00 0.00 0.86
88 89 8.709646 GGTTCACTTAATTTGCTCCGTATATAG 58.290 37.037 0.00 0.00 0.00 1.31
89 90 9.257651 GTTCACTTAATTTGCTCCGTATATAGT 57.742 33.333 0.00 0.00 0.00 2.12
90 91 9.472361 TTCACTTAATTTGCTCCGTATATAGTC 57.528 33.333 0.00 0.00 0.00 2.59
91 92 8.635328 TCACTTAATTTGCTCCGTATATAGTCA 58.365 33.333 0.00 0.00 0.00 3.41
92 93 9.424319 CACTTAATTTGCTCCGTATATAGTCAT 57.576 33.333 0.00 0.00 0.00 3.06
93 94 9.998106 ACTTAATTTGCTCCGTATATAGTCATT 57.002 29.630 0.00 0.00 0.00 2.57
96 97 8.677148 AATTTGCTCCGTATATAGTCATTTGT 57.323 30.769 0.00 0.00 0.00 2.83
97 98 8.677148 ATTTGCTCCGTATATAGTCATTTGTT 57.323 30.769 0.00 0.00 0.00 2.83
98 99 7.477144 TTGCTCCGTATATAGTCATTTGTTG 57.523 36.000 0.00 0.00 0.00 3.33
99 100 5.989168 TGCTCCGTATATAGTCATTTGTTGG 59.011 40.000 0.00 0.00 0.00 3.77
100 101 6.183360 TGCTCCGTATATAGTCATTTGTTGGA 60.183 38.462 0.00 0.00 0.00 3.53
101 102 6.704493 GCTCCGTATATAGTCATTTGTTGGAA 59.296 38.462 0.00 0.00 0.00 3.53
102 103 7.387948 GCTCCGTATATAGTCATTTGTTGGAAT 59.612 37.037 0.00 0.00 0.00 3.01
103 104 8.827177 TCCGTATATAGTCATTTGTTGGAATC 57.173 34.615 0.00 0.00 0.00 2.52
104 105 8.647796 TCCGTATATAGTCATTTGTTGGAATCT 58.352 33.333 0.00 0.00 0.00 2.40
105 106 8.926710 CCGTATATAGTCATTTGTTGGAATCTC 58.073 37.037 0.00 0.00 0.00 2.75
106 107 9.698309 CGTATATAGTCATTTGTTGGAATCTCT 57.302 33.333 0.00 0.00 0.00 3.10
113 114 9.354673 AGTCATTTGTTGGAATCTCTAAAAAGA 57.645 29.630 0.00 0.00 0.00 2.52
114 115 9.399403 GTCATTTGTTGGAATCTCTAAAAAGAC 57.601 33.333 0.00 0.00 0.00 3.01
115 116 9.354673 TCATTTGTTGGAATCTCTAAAAAGACT 57.645 29.630 0.00 0.00 0.00 3.24
116 117 9.971922 CATTTGTTGGAATCTCTAAAAAGACTT 57.028 29.630 0.00 0.00 0.00 3.01
129 130 9.103861 CTCTAAAAAGACTTAGAGGCTAATTGG 57.896 37.037 11.06 0.00 46.00 3.16
130 131 8.603304 TCTAAAAAGACTTAGAGGCTAATTGGT 58.397 33.333 0.00 0.00 27.04 3.67
131 132 9.232473 CTAAAAAGACTTAGAGGCTAATTGGTT 57.768 33.333 0.00 0.00 27.04 3.67
132 133 8.478775 AAAAAGACTTAGAGGCTAATTGGTTT 57.521 30.769 0.00 0.00 27.04 3.27
133 134 7.454260 AAAGACTTAGAGGCTAATTGGTTTG 57.546 36.000 0.00 0.00 27.04 2.93
134 135 6.374417 AGACTTAGAGGCTAATTGGTTTGA 57.626 37.500 0.00 0.00 26.27 2.69
135 136 6.963322 AGACTTAGAGGCTAATTGGTTTGAT 58.037 36.000 0.00 0.00 26.27 2.57
136 137 6.825721 AGACTTAGAGGCTAATTGGTTTGATG 59.174 38.462 0.00 0.00 26.27 3.07
137 138 5.358160 ACTTAGAGGCTAATTGGTTTGATGC 59.642 40.000 0.00 0.00 0.00 3.91
138 139 3.026694 AGAGGCTAATTGGTTTGATGCC 58.973 45.455 0.00 0.00 39.19 4.40
139 140 2.760092 GAGGCTAATTGGTTTGATGCCA 59.240 45.455 0.00 0.00 41.12 4.92
140 141 2.762327 AGGCTAATTGGTTTGATGCCAG 59.238 45.455 0.00 0.00 41.12 4.85
141 142 2.543641 GCTAATTGGTTTGATGCCAGC 58.456 47.619 0.00 0.00 37.31 4.85
142 143 2.094078 GCTAATTGGTTTGATGCCAGCA 60.094 45.455 0.00 0.00 37.31 4.41
143 144 3.431207 GCTAATTGGTTTGATGCCAGCAT 60.431 43.478 4.45 4.45 37.31 3.79
144 145 3.706600 AATTGGTTTGATGCCAGCATT 57.293 38.095 6.57 0.00 37.31 3.56
145 146 3.706600 ATTGGTTTGATGCCAGCATTT 57.293 38.095 6.57 0.00 37.31 2.32
146 147 2.459060 TGGTTTGATGCCAGCATTTG 57.541 45.000 6.57 0.00 36.70 2.32
194 195 5.326292 GCATTTGGCAATATCAAAAGTTGC 58.674 37.500 0.00 0.97 45.54 4.17
203 204 8.218256 GCAATATCAAAAGTTGCCAAAAATTG 57.782 30.769 0.00 0.00 41.67 2.32
218 219 7.355332 CCAAAAATTGGCAACTTCTTATGAG 57.645 36.000 0.00 0.00 45.17 2.90
219 220 6.369615 CCAAAAATTGGCAACTTCTTATGAGG 59.630 38.462 0.00 0.00 45.17 3.86
220 221 4.725790 AATTGGCAACTTCTTATGAGGC 57.274 40.909 0.00 0.00 37.61 4.70
221 222 3.439857 TTGGCAACTTCTTATGAGGCT 57.560 42.857 0.00 0.00 37.61 4.58
222 223 2.715046 TGGCAACTTCTTATGAGGCTG 58.285 47.619 0.00 0.00 37.61 4.85
223 224 2.040278 TGGCAACTTCTTATGAGGCTGT 59.960 45.455 0.00 0.00 37.61 4.40
224 225 2.680339 GGCAACTTCTTATGAGGCTGTC 59.320 50.000 0.00 0.00 0.00 3.51
225 226 3.338249 GCAACTTCTTATGAGGCTGTCA 58.662 45.455 0.00 0.00 40.38 3.58
226 227 3.753272 GCAACTTCTTATGAGGCTGTCAA 59.247 43.478 0.00 0.00 39.19 3.18
227 228 4.142730 GCAACTTCTTATGAGGCTGTCAAG 60.143 45.833 0.00 0.00 39.19 3.02
228 229 4.899352 ACTTCTTATGAGGCTGTCAAGT 57.101 40.909 0.00 0.00 39.19 3.16
229 230 6.166279 CAACTTCTTATGAGGCTGTCAAGTA 58.834 40.000 0.00 0.00 39.19 2.24
230 231 6.360370 ACTTCTTATGAGGCTGTCAAGTAA 57.640 37.500 0.00 0.00 39.19 2.24
231 232 6.769512 ACTTCTTATGAGGCTGTCAAGTAAA 58.230 36.000 0.00 0.00 39.19 2.01
232 233 7.224297 ACTTCTTATGAGGCTGTCAAGTAAAA 58.776 34.615 0.00 0.00 39.19 1.52
233 234 7.885399 ACTTCTTATGAGGCTGTCAAGTAAAAT 59.115 33.333 0.00 0.00 39.19 1.82
234 235 8.635765 TTCTTATGAGGCTGTCAAGTAAAATT 57.364 30.769 0.00 0.00 39.19 1.82
235 236 8.268850 TCTTATGAGGCTGTCAAGTAAAATTC 57.731 34.615 0.00 0.00 39.19 2.17
236 237 5.551760 ATGAGGCTGTCAAGTAAAATTCG 57.448 39.130 0.00 0.00 39.19 3.34
237 238 4.385825 TGAGGCTGTCAAGTAAAATTCGT 58.614 39.130 0.00 0.00 29.64 3.85
238 239 5.543714 TGAGGCTGTCAAGTAAAATTCGTA 58.456 37.500 0.00 0.00 29.64 3.43
239 240 5.992829 TGAGGCTGTCAAGTAAAATTCGTAA 59.007 36.000 0.00 0.00 29.64 3.18
240 241 6.073440 TGAGGCTGTCAAGTAAAATTCGTAAC 60.073 38.462 0.00 0.00 29.64 2.50
241 242 5.180680 AGGCTGTCAAGTAAAATTCGTAACC 59.819 40.000 0.00 0.00 0.00 2.85
242 243 5.049267 GGCTGTCAAGTAAAATTCGTAACCA 60.049 40.000 0.00 0.00 0.00 3.67
243 244 6.432107 GCTGTCAAGTAAAATTCGTAACCAA 58.568 36.000 0.00 0.00 0.00 3.67
244 245 7.081976 GCTGTCAAGTAAAATTCGTAACCAAT 58.918 34.615 0.00 0.00 0.00 3.16
245 246 7.270579 GCTGTCAAGTAAAATTCGTAACCAATC 59.729 37.037 0.00 0.00 0.00 2.67
246 247 8.155821 TGTCAAGTAAAATTCGTAACCAATCA 57.844 30.769 0.00 0.00 0.00 2.57
247 248 8.622157 TGTCAAGTAAAATTCGTAACCAATCAA 58.378 29.630 0.00 0.00 0.00 2.57
248 249 9.113876 GTCAAGTAAAATTCGTAACCAATCAAG 57.886 33.333 0.00 0.00 0.00 3.02
249 250 7.806014 TCAAGTAAAATTCGTAACCAATCAAGC 59.194 33.333 0.00 0.00 0.00 4.01
250 251 7.209471 AGTAAAATTCGTAACCAATCAAGCA 57.791 32.000 0.00 0.00 0.00 3.91
251 252 7.081976 AGTAAAATTCGTAACCAATCAAGCAC 58.918 34.615 0.00 0.00 0.00 4.40
252 253 5.446143 AAATTCGTAACCAATCAAGCACA 57.554 34.783 0.00 0.00 0.00 4.57
253 254 5.446143 AATTCGTAACCAATCAAGCACAA 57.554 34.783 0.00 0.00 0.00 3.33
254 255 4.481930 TTCGTAACCAATCAAGCACAAG 57.518 40.909 0.00 0.00 0.00 3.16
255 256 2.225491 TCGTAACCAATCAAGCACAAGC 59.775 45.455 0.00 0.00 42.56 4.01
256 257 2.668279 CGTAACCAATCAAGCACAAGCC 60.668 50.000 0.00 0.00 43.56 4.35
257 258 1.412079 AACCAATCAAGCACAAGCCA 58.588 45.000 0.00 0.00 43.56 4.75
258 259 1.412079 ACCAATCAAGCACAAGCCAA 58.588 45.000 0.00 0.00 43.56 4.52
259 260 1.972795 ACCAATCAAGCACAAGCCAAT 59.027 42.857 0.00 0.00 43.56 3.16
260 261 3.164268 ACCAATCAAGCACAAGCCAATA 58.836 40.909 0.00 0.00 43.56 1.90
261 262 3.770933 ACCAATCAAGCACAAGCCAATAT 59.229 39.130 0.00 0.00 43.56 1.28
262 263 4.223477 ACCAATCAAGCACAAGCCAATATT 59.777 37.500 0.00 0.00 43.56 1.28
263 264 5.180271 CCAATCAAGCACAAGCCAATATTT 58.820 37.500 0.00 0.00 43.56 1.40
264 265 5.064198 CCAATCAAGCACAAGCCAATATTTG 59.936 40.000 0.00 0.00 43.56 2.32
294 295 5.883503 CCAAATGTTGGCATGCTAATTTT 57.116 34.783 20.04 17.95 45.17 1.82
295 296 6.256912 CCAAATGTTGGCATGCTAATTTTT 57.743 33.333 20.04 17.64 45.17 1.94
296 297 6.087522 CCAAATGTTGGCATGCTAATTTTTG 58.912 36.000 28.21 28.21 45.17 2.44
297 298 6.072618 CCAAATGTTGGCATGCTAATTTTTGA 60.073 34.615 32.29 14.14 45.17 2.69
298 299 6.484818 AATGTTGGCATGCTAATTTTTGAC 57.515 33.333 20.04 6.31 35.15 3.18
299 300 4.953667 TGTTGGCATGCTAATTTTTGACA 58.046 34.783 20.04 8.99 0.00 3.58
300 301 5.549347 TGTTGGCATGCTAATTTTTGACAT 58.451 33.333 20.04 0.00 0.00 3.06
301 302 5.638657 TGTTGGCATGCTAATTTTTGACATC 59.361 36.000 20.04 3.45 0.00 3.06
302 303 5.402997 TGGCATGCTAATTTTTGACATCA 57.597 34.783 18.92 0.00 0.00 3.07
303 304 5.791666 TGGCATGCTAATTTTTGACATCAA 58.208 33.333 18.92 0.00 0.00 2.57
304 305 6.228995 TGGCATGCTAATTTTTGACATCAAA 58.771 32.000 18.92 2.89 43.36 2.69
305 306 6.147492 TGGCATGCTAATTTTTGACATCAAAC 59.853 34.615 18.92 0.00 44.56 2.93
306 307 6.402442 GGCATGCTAATTTTTGACATCAAACC 60.402 38.462 18.92 0.00 44.56 3.27
307 308 6.147492 GCATGCTAATTTTTGACATCAAACCA 59.853 34.615 11.37 0.00 44.56 3.67
308 309 7.307870 GCATGCTAATTTTTGACATCAAACCAA 60.308 33.333 11.37 0.83 44.56 3.67
309 310 8.723311 CATGCTAATTTTTGACATCAAACCAAT 58.277 29.630 6.55 3.06 44.56 3.16
310 311 8.309163 TGCTAATTTTTGACATCAAACCAATC 57.691 30.769 6.55 0.00 44.56 2.67
311 312 7.930325 TGCTAATTTTTGACATCAAACCAATCA 59.070 29.630 6.55 0.00 44.56 2.57
312 313 8.938906 GCTAATTTTTGACATCAAACCAATCAT 58.061 29.630 6.55 0.00 44.56 2.45
314 315 6.542574 TTTTTGACATCAAACCAATCATGC 57.457 33.333 6.55 0.00 44.56 4.06
315 316 5.471556 TTTGACATCAAACCAATCATGCT 57.528 34.783 2.89 0.00 40.55 3.79
316 317 5.471556 TTGACATCAAACCAATCATGCTT 57.528 34.783 0.00 0.00 32.11 3.91
317 318 5.471556 TGACATCAAACCAATCATGCTTT 57.528 34.783 0.00 0.00 0.00 3.51
318 319 5.856156 TGACATCAAACCAATCATGCTTTT 58.144 33.333 0.00 0.00 0.00 2.27
319 320 6.990798 TGACATCAAACCAATCATGCTTTTA 58.009 32.000 0.00 0.00 0.00 1.52
320 321 7.613585 TGACATCAAACCAATCATGCTTTTAT 58.386 30.769 0.00 0.00 0.00 1.40
321 322 7.546316 TGACATCAAACCAATCATGCTTTTATG 59.454 33.333 0.00 0.00 0.00 1.90
322 323 7.388437 ACATCAAACCAATCATGCTTTTATGT 58.612 30.769 0.00 0.00 0.00 2.29
323 324 7.879160 ACATCAAACCAATCATGCTTTTATGTT 59.121 29.630 0.00 0.00 0.00 2.71
324 325 8.723311 CATCAAACCAATCATGCTTTTATGTTT 58.277 29.630 0.00 0.00 0.00 2.83
325 326 9.941325 ATCAAACCAATCATGCTTTTATGTTTA 57.059 25.926 0.00 0.00 0.00 2.01
326 327 9.421806 TCAAACCAATCATGCTTTTATGTTTAG 57.578 29.630 0.00 0.00 0.00 1.85
327 328 9.421806 CAAACCAATCATGCTTTTATGTTTAGA 57.578 29.630 0.00 0.00 0.00 2.10
328 329 9.995003 AAACCAATCATGCTTTTATGTTTAGAA 57.005 25.926 0.00 0.00 0.00 2.10
329 330 9.995003 AACCAATCATGCTTTTATGTTTAGAAA 57.005 25.926 0.00 0.00 0.00 2.52
330 331 9.423061 ACCAATCATGCTTTTATGTTTAGAAAC 57.577 29.630 0.00 0.00 39.33 2.78
331 332 8.586273 CCAATCATGCTTTTATGTTTAGAAACG 58.414 33.333 0.97 0.00 41.74 3.60
332 333 8.586273 CAATCATGCTTTTATGTTTAGAAACGG 58.414 33.333 0.97 0.00 41.74 4.44
333 334 7.441890 TCATGCTTTTATGTTTAGAAACGGA 57.558 32.000 0.97 0.00 41.74 4.69
334 335 7.526608 TCATGCTTTTATGTTTAGAAACGGAG 58.473 34.615 0.97 0.00 41.74 4.63
335 336 6.249035 TGCTTTTATGTTTAGAAACGGAGG 57.751 37.500 0.97 0.00 41.74 4.30
336 337 5.182380 TGCTTTTATGTTTAGAAACGGAGGG 59.818 40.000 0.97 0.00 41.74 4.30
337 338 5.413523 GCTTTTATGTTTAGAAACGGAGGGA 59.586 40.000 0.97 0.00 41.74 4.20
338 339 6.403309 GCTTTTATGTTTAGAAACGGAGGGAG 60.403 42.308 0.97 0.00 41.74 4.30
339 340 5.750352 TTATGTTTAGAAACGGAGGGAGT 57.250 39.130 0.97 0.00 41.74 3.85
340 341 6.855763 TTATGTTTAGAAACGGAGGGAGTA 57.144 37.500 0.97 0.00 41.74 2.59
341 342 4.525912 TGTTTAGAAACGGAGGGAGTAC 57.474 45.455 0.97 0.00 41.74 2.73
342 343 3.259123 TGTTTAGAAACGGAGGGAGTACC 59.741 47.826 0.97 0.00 41.74 3.34
388 833 5.139727 CACAAATTTCTATATGGGCCTGGA 58.860 41.667 4.53 0.00 0.00 3.86
391 836 5.669798 AATTTCTATATGGGCCTGGAGTT 57.330 39.130 4.53 0.00 0.00 3.01
446 891 2.370349 CTCTCTCCTCGAACAGCCTAA 58.630 52.381 0.00 0.00 0.00 2.69
447 892 2.093106 TCTCTCCTCGAACAGCCTAAC 58.907 52.381 0.00 0.00 0.00 2.34
449 894 0.802607 CTCCTCGAACAGCCTAACGC 60.803 60.000 0.00 0.00 37.98 4.84
451 896 1.154093 CTCGAACAGCCTAACGCGA 60.154 57.895 15.93 0.00 44.76 5.87
474 2149 3.451894 GCATCCCAGCCCAAACGG 61.452 66.667 0.00 0.00 0.00 4.44
547 2240 4.078516 CCCGGTCAACGTCTCCCC 62.079 72.222 0.00 0.00 42.24 4.81
679 2372 4.247380 CATCCCTCCTCTGCGCCC 62.247 72.222 4.18 0.00 0.00 6.13
775 2468 2.159517 GCTGGTAATTTTCTCGCTGGTG 60.160 50.000 0.00 0.00 0.00 4.17
780 2473 3.369546 AATTTTCTCGCTGGTGGTTTG 57.630 42.857 0.00 0.00 0.00 2.93
782 2475 0.106918 TTTCTCGCTGGTGGTTTGGT 60.107 50.000 0.00 0.00 0.00 3.67
783 2476 0.534203 TTCTCGCTGGTGGTTTGGTC 60.534 55.000 0.00 0.00 0.00 4.02
784 2477 1.071471 CTCGCTGGTGGTTTGGTCT 59.929 57.895 0.00 0.00 0.00 3.85
835 2528 8.084684 TCTGATTGTCACACTGCATATATAGAC 58.915 37.037 0.00 0.00 0.00 2.59
960 2663 5.695851 ATAGAAGTTGGTGTTTGCTTCAG 57.304 39.130 0.00 0.00 39.62 3.02
973 2676 0.250467 GCTTCAGTCCTGGCTTCACA 60.250 55.000 0.00 0.00 0.00 3.58
1030 2733 2.909006 AGTCCAAAGCTTCTCTCATGGA 59.091 45.455 10.59 10.59 37.97 3.41
1122 2825 0.469144 TCGACGATGATGATCCCCCA 60.469 55.000 0.00 0.00 0.00 4.96
1236 2942 2.741092 GCACACTCCGACCTTCCA 59.259 61.111 0.00 0.00 0.00 3.53
1302 3008 2.203209 ATTGGATTCCGCGAGCCC 60.203 61.111 8.23 3.52 0.00 5.19
1396 3117 4.517285 GAACAGAGAGGATGTTTATGGCA 58.483 43.478 0.00 0.00 40.86 4.92
1399 3120 3.875727 CAGAGAGGATGTTTATGGCAGTG 59.124 47.826 0.00 0.00 0.00 3.66
1405 3126 2.753055 TGTTTATGGCAGTGCGAGTA 57.247 45.000 9.45 0.00 0.00 2.59
1515 3236 5.415701 GCAGATCAATTTGGGTGAGTTCTTA 59.584 40.000 0.00 0.00 0.00 2.10
1541 3267 1.610038 CAACTCAGTGCTGAAATGGCA 59.390 47.619 3.36 0.00 39.39 4.92
1581 3307 2.053627 GTTGTCCAAGCTTTCGCATTG 58.946 47.619 0.00 0.00 39.10 2.82
1585 3311 0.785979 CCAAGCTTTCGCATTGCAAC 59.214 50.000 0.00 0.00 39.10 4.17
1625 4304 6.588756 CACATTTTGTTTGATTGATGAGGGAG 59.411 38.462 0.00 0.00 0.00 4.30
1630 4309 5.875224 TGTTTGATTGATGAGGGAGTAACA 58.125 37.500 0.00 0.00 0.00 2.41
1661 4343 9.815936 GAATTTTTAGCATTGAATTTGGTCAAG 57.184 29.630 0.00 0.00 40.72 3.02
1664 4346 6.899393 TTAGCATTGAATTTGGTCAAGTCT 57.101 33.333 0.00 0.00 40.72 3.24
1669 4351 5.756195 TTGAATTTGGTCAAGTCTGTGAG 57.244 39.130 0.00 0.00 32.56 3.51
1730 4495 9.013229 GGATCAATTGTTTGCATAGTATATGGA 57.987 33.333 5.13 0.00 32.61 3.41
1747 4549 1.693062 TGGAAAGTGCCATTGTGCATT 59.307 42.857 0.00 0.00 44.30 3.56
1775 4577 2.061028 GGCTTATGTTGTTGCAACTGC 58.939 47.619 28.61 20.66 42.50 4.40
1779 4581 5.163513 GCTTATGTTGTTGCAACTGCTATT 58.836 37.500 28.61 12.11 42.66 1.73
1780 4582 5.287035 GCTTATGTTGTTGCAACTGCTATTC 59.713 40.000 28.61 12.04 42.66 1.75
1800 4602 7.912250 GCTATTCTTGAACATTTGATCATTCGT 59.088 33.333 0.00 0.00 0.00 3.85
1824 4626 8.447833 CGTGTAGCTCAGGAAAAATTACATTTA 58.552 33.333 0.00 0.00 34.28 1.40
1830 4632 9.226345 GCTCAGGAAAAATTACATTTATCTTCG 57.774 33.333 0.00 0.00 0.00 3.79
1860 4662 7.177392 GCATTCCCTTGTTCCTGCTATAAATAT 59.823 37.037 0.00 0.00 0.00 1.28
1865 4667 7.362401 CCCTTGTTCCTGCTATAAATATGATGC 60.362 40.741 0.00 0.00 0.00 3.91
1866 4668 7.175467 CCTTGTTCCTGCTATAAATATGATGCA 59.825 37.037 0.00 0.00 0.00 3.96
1869 4671 7.884354 TGTTCCTGCTATAAATATGATGCATCA 59.116 33.333 30.47 30.47 41.70 3.07
1885 4687 2.686915 GCATCATGTTCTCAGGGAAAGG 59.313 50.000 0.00 0.00 35.51 3.11
1943 4745 2.049156 TGGAGACGTGCAGAAGCG 60.049 61.111 0.00 0.00 46.23 4.68
2040 4842 3.655486 TGCCACATGCTTGAGAAAATTG 58.345 40.909 6.60 0.00 42.00 2.32
2055 4857 5.896963 AGAAAATTGGGGATTGAACTCTCT 58.103 37.500 0.00 0.00 0.00 3.10
2072 4874 8.739039 TGAACTCTCTTTTTCTGTTGAATTCAA 58.261 29.630 16.91 16.91 31.56 2.69
2128 4930 2.311542 TGCAGGATAAAACAGGTGGGAT 59.688 45.455 0.00 0.00 0.00 3.85
2136 4938 8.164070 AGGATAAAACAGGTGGGATAATCATAC 58.836 37.037 0.00 0.00 0.00 2.39
2139 4941 5.975988 AACAGGTGGGATAATCATACACT 57.024 39.130 0.00 0.00 32.88 3.55
2264 5066 2.507339 AGGTTGTCCAAAATGTTGCG 57.493 45.000 0.00 0.00 35.89 4.85
2305 5107 7.975616 TGAGGAAACAAAAGAAATGAGAAACAG 59.024 33.333 0.00 0.00 0.00 3.16
2381 5183 6.150976 AGCAAGACCATTTCGAATCACATAAA 59.849 34.615 0.00 0.00 0.00 1.40
2392 5231 6.040247 TCGAATCACATAAACGCATACTTCT 58.960 36.000 0.00 0.00 0.00 2.85
2399 5238 8.360390 TCACATAAACGCATACTTCTATCTCAT 58.640 33.333 0.00 0.00 0.00 2.90
2445 5284 6.144724 GTCGCTCCTATGTTGTGATATTTCTC 59.855 42.308 0.00 0.00 0.00 2.87
2513 5352 4.221924 AGTGAGAGAGGCCTTTAAGACTTC 59.778 45.833 6.77 0.00 0.00 3.01
2543 5382 4.710423 TGAGACTAGATTGCTCTCACAC 57.290 45.455 6.02 0.00 36.37 3.82
2547 5386 0.175760 TAGATTGCTCTCACACCGGC 59.824 55.000 0.00 0.00 32.66 6.13
2564 5403 2.414559 CCGGCACTAGTGATTGCAAAAG 60.415 50.000 27.08 5.68 40.75 2.27
2578 5417 4.734398 TGCAAAAGAATTGGTGTGAAGT 57.266 36.364 0.00 0.00 0.00 3.01
2581 5420 4.260334 GCAAAAGAATTGGTGTGAAGTTGC 60.260 41.667 0.00 0.00 0.00 4.17
2593 5432 1.876799 TGAAGTTGCGGGTATGTTGTG 59.123 47.619 0.00 0.00 0.00 3.33
2596 5435 1.202710 AGTTGCGGGTATGTTGTGACA 60.203 47.619 0.00 0.00 40.71 3.58
2604 5443 5.756347 GCGGGTATGTTGTGACATTCTAATA 59.244 40.000 0.00 0.00 43.92 0.98
2607 5446 7.494625 CGGGTATGTTGTGACATTCTAATACTT 59.505 37.037 0.00 0.00 43.92 2.24
2642 5481 9.693739 TTAATCCCTTTAGTCTTGCATTCATAA 57.306 29.630 0.00 0.00 0.00 1.90
2644 5483 6.957631 TCCCTTTAGTCTTGCATTCATAAGA 58.042 36.000 0.00 0.00 0.00 2.10
2653 5492 8.675504 AGTCTTGCATTCATAAGAAAGATCAAG 58.324 33.333 0.00 0.00 37.29 3.02
2657 5496 7.993101 TGCATTCATAAGAAAGATCAAGGAAG 58.007 34.615 0.00 0.00 37.29 3.46
2659 5498 7.424001 CATTCATAAGAAAGATCAAGGAAGCC 58.576 38.462 0.00 0.00 37.29 4.35
2660 5499 6.319048 TCATAAGAAAGATCAAGGAAGCCT 57.681 37.500 0.00 0.00 33.87 4.58
2662 5501 3.362870 AGAAAGATCAAGGAAGCCTGG 57.637 47.619 0.00 0.00 32.13 4.45
2663 5502 2.915604 AGAAAGATCAAGGAAGCCTGGA 59.084 45.455 0.00 0.00 38.06 3.86
2664 5503 3.331889 AGAAAGATCAAGGAAGCCTGGAA 59.668 43.478 0.00 0.00 37.11 3.53
2665 5504 3.814504 AAGATCAAGGAAGCCTGGAAA 57.185 42.857 0.00 0.00 37.11 3.13
2666 5505 3.814504 AGATCAAGGAAGCCTGGAAAA 57.185 42.857 0.00 0.00 37.11 2.29
2667 5506 4.328118 AGATCAAGGAAGCCTGGAAAAT 57.672 40.909 0.00 0.00 37.11 1.82
2671 5510 6.899631 AGATCAAGGAAGCCTGGAAAATAAAT 59.100 34.615 0.00 0.00 37.11 1.40
2674 5513 8.429237 TCAAGGAAGCCTGGAAAATAAATAAA 57.571 30.769 0.00 0.00 29.23 1.40
2756 5595 1.053424 AACGACCCTCCTGCAGTTTA 58.947 50.000 13.81 0.00 0.00 2.01
2759 5598 1.270625 CGACCCTCCTGCAGTTTACAA 60.271 52.381 13.81 0.00 0.00 2.41
2762 5601 4.585879 GACCCTCCTGCAGTTTACAATTA 58.414 43.478 13.81 0.00 0.00 1.40
2773 5612 6.255670 TGCAGTTTACAATTAGCTCGTCATAG 59.744 38.462 0.00 0.00 0.00 2.23
2781 5620 0.033228 AGCTCGTCATAGATGCAGCC 59.967 55.000 0.00 0.00 0.00 4.85
2789 5629 5.010617 TCGTCATAGATGCAGCCAAGTATAA 59.989 40.000 0.00 0.00 0.00 0.98
2817 5657 6.128282 TGCCTTAGAACTTGCTTAGAATTTCG 60.128 38.462 0.00 0.00 0.00 3.46
2830 5670 6.092807 GCTTAGAATTTCGGACAGAAGACATT 59.907 38.462 0.00 0.00 40.40 2.71
2854 5695 4.095782 TCCTTTGCAACACAACAGTAGAAC 59.904 41.667 0.00 0.00 38.23 3.01
2870 5711 6.702329 CAGTAGAACCACTGGAGAATTTACT 58.298 40.000 0.71 0.00 41.88 2.24
2879 5720 8.265764 ACCACTGGAGAATTTACTATAGAAACC 58.734 37.037 6.78 2.00 0.00 3.27
2894 5735 8.153550 ACTATAGAAACCAGATGCTCCTTTATG 58.846 37.037 6.78 0.00 0.00 1.90
2900 5741 4.225942 ACCAGATGCTCCTTTATGTCTTGA 59.774 41.667 0.00 0.00 0.00 3.02
2907 5748 6.913170 TGCTCCTTTATGTCTTGAAAACATC 58.087 36.000 0.00 0.00 38.31 3.06
2911 5752 5.796935 CCTTTATGTCTTGAAAACATCGCAG 59.203 40.000 0.00 0.00 38.31 5.18
2934 5776 7.622048 GCAGTTGGAATGCTTATTTAACTTTGC 60.622 37.037 0.00 0.00 40.59 3.68
2936 5778 7.814587 AGTTGGAATGCTTATTTAACTTTGCTC 59.185 33.333 0.00 0.00 0.00 4.26
2940 5782 8.650714 GGAATGCTTATTTAACTTTGCTCTTTG 58.349 33.333 0.00 0.00 0.00 2.77
2941 5783 7.586714 ATGCTTATTTAACTTTGCTCTTTGC 57.413 32.000 0.00 0.00 43.25 3.68
2948 5790 3.998099 ACTTTGCTCTTTGCTTCCTTC 57.002 42.857 0.00 0.00 43.37 3.46
2950 5792 2.254546 TTGCTCTTTGCTTCCTTCGA 57.745 45.000 0.00 0.00 43.37 3.71
2976 5818 5.210430 TCATAGGATTTGGTTCCATGCATT 58.790 37.500 0.00 0.00 38.32 3.56
2983 5825 6.438425 GGATTTGGTTCCATGCATTCCTATAT 59.562 38.462 0.00 0.00 35.72 0.86
3062 5904 4.997395 TGTTTCAGCTCATTGTACTTCTCC 59.003 41.667 0.00 0.00 0.00 3.71
3069 5911 4.641396 CTCATTGTACTTCTCCACCACAA 58.359 43.478 0.00 0.00 33.96 3.33
3073 5915 4.698201 TGTACTTCTCCACCACAATGAA 57.302 40.909 0.00 0.00 0.00 2.57
3076 5918 2.107204 ACTTCTCCACCACAATGAAGCT 59.893 45.455 0.00 0.00 38.04 3.74
3077 5919 2.189594 TCTCCACCACAATGAAGCTG 57.810 50.000 0.00 0.00 0.00 4.24
3079 5921 0.770499 TCCACCACAATGAAGCTGGA 59.230 50.000 0.00 0.00 0.00 3.86
3080 5922 0.883833 CCACCACAATGAAGCTGGAC 59.116 55.000 0.00 0.00 0.00 4.02
3083 5925 1.171308 CCACAATGAAGCTGGACCAG 58.829 55.000 17.83 17.83 34.12 4.00
3085 5927 1.067295 ACAATGAAGCTGGACCAGGA 58.933 50.000 23.09 0.00 31.21 3.86
3086 5928 1.004044 ACAATGAAGCTGGACCAGGAG 59.996 52.381 23.09 0.00 31.21 3.69
3087 5929 0.622665 AATGAAGCTGGACCAGGAGG 59.377 55.000 23.09 0.00 42.21 4.30
3104 6043 1.548269 GAGGACTCACAGTAGCAGCTT 59.452 52.381 0.00 0.00 0.00 3.74
3130 6069 2.044252 AGGCCTGCTGCTTGGATG 60.044 61.111 3.11 0.00 40.92 3.51
3135 6074 0.809385 CCTGCTGCTTGGATGACTTG 59.191 55.000 0.00 0.00 0.00 3.16
3137 6076 2.616256 CCTGCTGCTTGGATGACTTGTA 60.616 50.000 0.00 0.00 0.00 2.41
3141 6080 3.064545 GCTGCTTGGATGACTTGTATGAC 59.935 47.826 0.00 0.00 0.00 3.06
3144 6083 4.937620 TGCTTGGATGACTTGTATGACTTC 59.062 41.667 0.00 0.00 0.00 3.01
3147 6086 4.832248 TGGATGACTTGTATGACTTCCAC 58.168 43.478 0.00 0.00 33.66 4.02
3154 6093 3.165058 TGTATGACTTCCACGAGATGC 57.835 47.619 0.00 0.00 0.00 3.91
3169 6108 2.606725 GAGATGCGTTCACTGGAGAATG 59.393 50.000 0.00 0.00 37.53 2.67
3185 6124 4.262463 GGAGAATGCCACCATCTATCGTTA 60.262 45.833 0.00 0.00 0.00 3.18
3193 6132 5.864474 GCCACCATCTATCGTTAGATTACAG 59.136 44.000 12.37 5.91 41.47 2.74
3196 6135 6.923508 CACCATCTATCGTTAGATTACAGCAA 59.076 38.462 12.37 0.00 41.47 3.91
3197 6136 6.924060 ACCATCTATCGTTAGATTACAGCAAC 59.076 38.462 12.37 0.00 41.47 4.17
3218 6157 5.528043 ACATAAGGATCTGCAGTCTACAG 57.472 43.478 14.67 0.00 36.44 2.74
3230 6169 6.040278 TCTGCAGTCTACAGGAAATGATCTAG 59.960 42.308 14.67 0.00 35.78 2.43
3234 6173 6.478344 CAGTCTACAGGAAATGATCTAGTTGC 59.522 42.308 0.00 0.00 0.00 4.17
3241 6180 6.149973 CAGGAAATGATCTAGTTGCTTGTCAA 59.850 38.462 0.00 0.00 32.55 3.18
3242 6181 6.888632 AGGAAATGATCTAGTTGCTTGTCAAT 59.111 34.615 0.00 0.00 30.60 2.57
3258 6198 5.300969 TGTCAATATTTCTTGCTGCTGTC 57.699 39.130 0.00 0.00 0.00 3.51
3270 6210 4.754372 TGCTGCTGTCTGAAGTAATTTG 57.246 40.909 0.00 0.00 0.00 2.32
3274 6215 5.390356 GCTGCTGTCTGAAGTAATTTGTCTC 60.390 44.000 0.00 0.00 0.00 3.36
3279 6220 6.925211 TGTCTGAAGTAATTTGTCTCGAGAT 58.075 36.000 19.90 4.39 0.00 2.75
3280 6221 7.378966 TGTCTGAAGTAATTTGTCTCGAGATT 58.621 34.615 19.90 11.24 0.00 2.40
3290 6231 2.357952 TGTCTCGAGATTATGTGGACCG 59.642 50.000 19.90 0.00 0.00 4.79
3291 6232 1.337071 TCTCGAGATTATGTGGACCGC 59.663 52.381 12.08 0.00 0.00 5.68
3297 6238 2.080693 GATTATGTGGACCGCACAACA 58.919 47.619 10.61 0.00 36.06 3.33
3298 6239 1.518325 TTATGTGGACCGCACAACAG 58.482 50.000 10.61 0.00 36.06 3.16
3301 6249 1.961277 GTGGACCGCACAACAGGAG 60.961 63.158 0.00 0.00 0.00 3.69
3306 6254 1.367471 CCGCACAACAGGAGAGTGA 59.633 57.895 0.00 0.00 35.33 3.41
3307 6255 0.036952 CCGCACAACAGGAGAGTGAT 60.037 55.000 0.00 0.00 35.33 3.06
3308 6256 1.073964 CGCACAACAGGAGAGTGATG 58.926 55.000 0.00 0.00 35.33 3.07
3313 6261 4.561530 GCACAACAGGAGAGTGATGTTCTA 60.562 45.833 0.00 0.00 35.04 2.10
3315 6263 6.169094 CACAACAGGAGAGTGATGTTCTATT 58.831 40.000 0.00 0.00 35.04 1.73
3318 6266 6.365970 ACAGGAGAGTGATGTTCTATTTGT 57.634 37.500 0.00 0.00 0.00 2.83
3326 6274 7.933577 AGAGTGATGTTCTATTTGTGTGAAGAA 59.066 33.333 0.00 0.00 0.00 2.52
3392 6579 1.301401 GTTGCCACGGTCAGCAGTA 60.301 57.895 2.96 0.00 40.73 2.74
3424 6611 3.574354 AGGATTCATCTTCAGCCTTCC 57.426 47.619 0.00 0.00 0.00 3.46
3434 6621 3.394836 AGCCTTCCGTCCTCTGGC 61.395 66.667 0.00 0.00 43.52 4.85
3436 6623 2.896443 CCTTCCGTCCTCTGGCTC 59.104 66.667 0.00 0.00 0.00 4.70
3437 6624 2.726351 CCTTCCGTCCTCTGGCTCC 61.726 68.421 0.00 0.00 0.00 4.70
3439 6626 3.539593 TTCCGTCCTCTGGCTCCCA 62.540 63.158 0.00 0.00 0.00 4.37
3442 6630 3.403558 GTCCTCTGGCTCCCACCC 61.404 72.222 0.00 0.00 0.00 4.61
3574 6764 5.365605 ACATCCATGCCATTTGAATCAAGAT 59.634 36.000 0.00 0.00 0.00 2.40
3621 6811 4.719040 CTTTTTAGCCGATGTTGTACACC 58.281 43.478 0.00 0.00 0.00 4.16
3705 6898 1.571460 GCTGTGTGACTTGCCTTCG 59.429 57.895 0.00 0.00 0.00 3.79
3709 6902 1.891919 TGTGACTTGCCTTCGTGCC 60.892 57.895 0.00 0.00 0.00 5.01
3773 6966 2.260844 TTCTGGCAAGTGGACAAGAG 57.739 50.000 0.00 0.00 30.64 2.85
3808 7001 1.197721 GAAGAACATGCCACCAGAACG 59.802 52.381 0.00 0.00 0.00 3.95
3817 7010 1.401539 GCCACCAGAACGAAAGCATTC 60.402 52.381 0.00 0.00 0.00 2.67
4001 7194 9.856162 ATTTTTCCCGCCTAACTATAATCTTAA 57.144 29.630 0.00 0.00 0.00 1.85
4002 7195 8.667076 TTTTCCCGCCTAACTATAATCTTAAC 57.333 34.615 0.00 0.00 0.00 2.01
4003 7196 7.607615 TTCCCGCCTAACTATAATCTTAACT 57.392 36.000 0.00 0.00 0.00 2.24
4004 7197 7.607615 TCCCGCCTAACTATAATCTTAACTT 57.392 36.000 0.00 0.00 0.00 2.66
4005 7198 7.439381 TCCCGCCTAACTATAATCTTAACTTG 58.561 38.462 0.00 0.00 0.00 3.16
4030 7223 3.766051 ACTTCAATCCTTTCAATCCCAGC 59.234 43.478 0.00 0.00 0.00 4.85
4042 7235 0.473326 ATCCCAGCTCATCCTTCTGC 59.527 55.000 0.00 0.00 0.00 4.26
4071 7264 9.832445 ACCTTTTGAATCGTAGTATGTATCAAT 57.168 29.630 10.99 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 8.484641 TGTTGTGCATTTGAAATGTCTAAAAA 57.515 26.923 18.12 2.61 0.00 1.94
3 4 8.386606 GTTGTTGTGCATTTGAAATGTCTAAAA 58.613 29.630 18.12 8.35 0.00 1.52
4 5 7.547019 TGTTGTTGTGCATTTGAAATGTCTAAA 59.453 29.630 18.12 6.57 0.00 1.85
5 6 7.038048 TGTTGTTGTGCATTTGAAATGTCTAA 58.962 30.769 18.12 8.70 0.00 2.10
6 7 6.567959 TGTTGTTGTGCATTTGAAATGTCTA 58.432 32.000 18.12 7.32 0.00 2.59
7 8 5.417811 TGTTGTTGTGCATTTGAAATGTCT 58.582 33.333 18.12 0.00 0.00 3.41
8 9 5.715429 TGTTGTTGTGCATTTGAAATGTC 57.285 34.783 18.12 11.39 0.00 3.06
9 10 6.074409 CGTATGTTGTTGTGCATTTGAAATGT 60.074 34.615 18.12 0.00 0.00 2.71
10 11 6.290643 CGTATGTTGTTGTGCATTTGAAATG 58.709 36.000 13.32 13.32 0.00 2.32
11 12 5.404968 CCGTATGTTGTTGTGCATTTGAAAT 59.595 36.000 0.00 0.00 0.00 2.17
12 13 4.742167 CCGTATGTTGTTGTGCATTTGAAA 59.258 37.500 0.00 0.00 0.00 2.69
13 14 4.036852 TCCGTATGTTGTTGTGCATTTGAA 59.963 37.500 0.00 0.00 0.00 2.69
14 15 3.565902 TCCGTATGTTGTTGTGCATTTGA 59.434 39.130 0.00 0.00 0.00 2.69
15 16 3.894920 TCCGTATGTTGTTGTGCATTTG 58.105 40.909 0.00 0.00 0.00 2.32
16 17 4.022416 ACATCCGTATGTTGTTGTGCATTT 60.022 37.500 0.00 0.00 44.07 2.32
17 18 3.505680 ACATCCGTATGTTGTTGTGCATT 59.494 39.130 0.00 0.00 44.07 3.56
18 19 3.081061 ACATCCGTATGTTGTTGTGCAT 58.919 40.909 0.00 0.00 44.07 3.96
19 20 2.499197 ACATCCGTATGTTGTTGTGCA 58.501 42.857 0.00 0.00 44.07 4.57
20 21 4.875544 ATACATCCGTATGTTGTTGTGC 57.124 40.909 0.00 0.00 44.07 4.57
21 22 8.912658 GTCTATATACATCCGTATGTTGTTGTG 58.087 37.037 0.00 0.00 44.07 3.33
22 23 8.635328 TGTCTATATACATCCGTATGTTGTTGT 58.365 33.333 0.00 0.00 44.07 3.32
23 24 9.639601 ATGTCTATATACATCCGTATGTTGTTG 57.360 33.333 0.00 0.00 44.07 3.33
52 53 9.953565 AGCAAATTAAGTGAACCTATACTGTAA 57.046 29.630 0.00 0.00 0.00 2.41
53 54 9.595823 GAGCAAATTAAGTGAACCTATACTGTA 57.404 33.333 0.00 0.00 0.00 2.74
54 55 7.553044 GGAGCAAATTAAGTGAACCTATACTGT 59.447 37.037 0.00 0.00 0.00 3.55
55 56 7.254455 CGGAGCAAATTAAGTGAACCTATACTG 60.254 40.741 0.00 0.00 0.00 2.74
56 57 6.761714 CGGAGCAAATTAAGTGAACCTATACT 59.238 38.462 0.00 0.00 0.00 2.12
57 58 6.537660 ACGGAGCAAATTAAGTGAACCTATAC 59.462 38.462 0.00 0.00 0.00 1.47
58 59 6.646267 ACGGAGCAAATTAAGTGAACCTATA 58.354 36.000 0.00 0.00 0.00 1.31
59 60 5.497474 ACGGAGCAAATTAAGTGAACCTAT 58.503 37.500 0.00 0.00 0.00 2.57
60 61 4.901868 ACGGAGCAAATTAAGTGAACCTA 58.098 39.130 0.00 0.00 0.00 3.08
61 62 3.751518 ACGGAGCAAATTAAGTGAACCT 58.248 40.909 0.00 0.00 0.00 3.50
62 63 5.813080 ATACGGAGCAAATTAAGTGAACC 57.187 39.130 0.00 0.00 0.00 3.62
63 64 9.257651 ACTATATACGGAGCAAATTAAGTGAAC 57.742 33.333 0.00 0.00 0.00 3.18
64 65 9.472361 GACTATATACGGAGCAAATTAAGTGAA 57.528 33.333 0.00 0.00 0.00 3.18
65 66 8.635328 TGACTATATACGGAGCAAATTAAGTGA 58.365 33.333 0.00 0.00 0.00 3.41
66 67 8.812147 TGACTATATACGGAGCAAATTAAGTG 57.188 34.615 0.00 0.00 0.00 3.16
67 68 9.998106 AATGACTATATACGGAGCAAATTAAGT 57.002 29.630 0.00 0.00 0.00 2.24
70 71 9.772973 ACAAATGACTATATACGGAGCAAATTA 57.227 29.630 0.00 0.00 0.00 1.40
71 72 8.677148 ACAAATGACTATATACGGAGCAAATT 57.323 30.769 0.00 0.00 0.00 1.82
72 73 8.559536 CAACAAATGACTATATACGGAGCAAAT 58.440 33.333 0.00 0.00 0.00 2.32
73 74 7.011950 CCAACAAATGACTATATACGGAGCAAA 59.988 37.037 0.00 0.00 0.00 3.68
74 75 6.481976 CCAACAAATGACTATATACGGAGCAA 59.518 38.462 0.00 0.00 0.00 3.91
75 76 5.989168 CCAACAAATGACTATATACGGAGCA 59.011 40.000 0.00 0.00 0.00 4.26
76 77 6.220930 TCCAACAAATGACTATATACGGAGC 58.779 40.000 0.00 0.00 0.00 4.70
77 78 8.833231 ATTCCAACAAATGACTATATACGGAG 57.167 34.615 0.00 0.00 0.00 4.63
78 79 8.647796 AGATTCCAACAAATGACTATATACGGA 58.352 33.333 0.00 0.00 0.00 4.69
79 80 8.833231 AGATTCCAACAAATGACTATATACGG 57.167 34.615 0.00 0.00 0.00 4.02
80 81 9.698309 AGAGATTCCAACAAATGACTATATACG 57.302 33.333 0.00 0.00 0.00 3.06
87 88 9.354673 TCTTTTTAGAGATTCCAACAAATGACT 57.645 29.630 0.00 0.00 0.00 3.41
88 89 9.399403 GTCTTTTTAGAGATTCCAACAAATGAC 57.601 33.333 0.00 0.00 0.00 3.06
89 90 9.354673 AGTCTTTTTAGAGATTCCAACAAATGA 57.645 29.630 0.00 0.00 0.00 2.57
90 91 9.971922 AAGTCTTTTTAGAGATTCCAACAAATG 57.028 29.630 0.00 0.00 0.00 2.32
104 105 8.603304 ACCAATTAGCCTCTAAGTCTTTTTAGA 58.397 33.333 0.00 0.00 37.33 2.10
105 106 8.794335 ACCAATTAGCCTCTAAGTCTTTTTAG 57.206 34.615 0.00 0.00 32.99 1.85
106 107 9.582648 AAACCAATTAGCCTCTAAGTCTTTTTA 57.417 29.630 0.00 0.00 0.00 1.52
107 108 8.360390 CAAACCAATTAGCCTCTAAGTCTTTTT 58.640 33.333 0.00 0.00 0.00 1.94
108 109 7.724061 TCAAACCAATTAGCCTCTAAGTCTTTT 59.276 33.333 0.00 0.00 0.00 2.27
109 110 7.231467 TCAAACCAATTAGCCTCTAAGTCTTT 58.769 34.615 0.00 0.00 0.00 2.52
110 111 6.779860 TCAAACCAATTAGCCTCTAAGTCTT 58.220 36.000 0.00 0.00 0.00 3.01
111 112 6.374417 TCAAACCAATTAGCCTCTAAGTCT 57.626 37.500 0.00 0.00 0.00 3.24
112 113 6.458888 GCATCAAACCAATTAGCCTCTAAGTC 60.459 42.308 0.00 0.00 0.00 3.01
113 114 5.358160 GCATCAAACCAATTAGCCTCTAAGT 59.642 40.000 0.00 0.00 0.00 2.24
114 115 5.221126 GGCATCAAACCAATTAGCCTCTAAG 60.221 44.000 0.00 0.00 37.67 2.18
115 116 4.644685 GGCATCAAACCAATTAGCCTCTAA 59.355 41.667 0.00 0.00 37.67 2.10
116 117 4.207165 GGCATCAAACCAATTAGCCTCTA 58.793 43.478 0.00 0.00 37.67 2.43
117 118 3.026694 GGCATCAAACCAATTAGCCTCT 58.973 45.455 0.00 0.00 37.67 3.69
118 119 2.760092 TGGCATCAAACCAATTAGCCTC 59.240 45.455 0.00 0.00 41.12 4.70
119 120 2.762327 CTGGCATCAAACCAATTAGCCT 59.238 45.455 0.00 0.00 41.12 4.58
120 121 2.739609 GCTGGCATCAAACCAATTAGCC 60.740 50.000 0.00 0.00 36.56 3.93
121 122 2.094078 TGCTGGCATCAAACCAATTAGC 60.094 45.455 0.00 0.00 36.56 3.09
122 123 3.872511 TGCTGGCATCAAACCAATTAG 57.127 42.857 0.00 0.00 36.56 1.73
123 124 4.822685 AATGCTGGCATCAAACCAATTA 57.177 36.364 8.57 0.00 36.56 1.40
124 125 3.706600 AATGCTGGCATCAAACCAATT 57.293 38.095 8.57 0.00 36.56 2.32
125 126 3.340034 CAAATGCTGGCATCAAACCAAT 58.660 40.909 8.57 0.00 36.56 3.16
126 127 2.550423 CCAAATGCTGGCATCAAACCAA 60.550 45.455 8.57 0.00 38.76 3.67
127 128 1.002201 CCAAATGCTGGCATCAAACCA 59.998 47.619 8.57 0.00 38.76 3.67
128 129 1.729284 CCAAATGCTGGCATCAAACC 58.271 50.000 8.57 0.00 38.76 3.27
155 156 1.856629 ATGCTGGCTTGCCAAGTATT 58.143 45.000 15.63 0.00 0.00 1.89
156 157 1.856629 AATGCTGGCTTGCCAAGTAT 58.143 45.000 15.63 11.16 0.00 2.12
157 158 1.273048 CAAATGCTGGCTTGCCAAGTA 59.727 47.619 15.63 9.49 0.00 2.24
158 159 0.034337 CAAATGCTGGCTTGCCAAGT 59.966 50.000 15.63 0.00 0.00 3.16
159 160 0.672401 CCAAATGCTGGCTTGCCAAG 60.672 55.000 15.63 10.51 38.76 3.61
160 161 1.371932 CCAAATGCTGGCTTGCCAA 59.628 52.632 15.63 2.02 38.76 4.52
161 162 3.061752 CCAAATGCTGGCTTGCCA 58.938 55.556 14.10 14.10 38.76 4.92
169 170 6.539324 CAACTTTTGATATTGCCAAATGCTG 58.461 36.000 0.00 0.00 42.00 4.41
170 171 5.122711 GCAACTTTTGATATTGCCAAATGCT 59.877 36.000 0.00 0.00 42.32 3.79
171 172 5.326292 GCAACTTTTGATATTGCCAAATGC 58.674 37.500 0.00 0.00 42.32 3.56
178 179 7.326547 CCAATTTTTGGCAACTTTTGATATTGC 59.673 33.333 0.00 0.00 45.17 3.56
179 180 8.730970 CCAATTTTTGGCAACTTTTGATATTG 57.269 30.769 0.00 1.81 45.17 1.90
195 196 6.128472 GCCTCATAAGAAGTTGCCAATTTTTG 60.128 38.462 0.00 0.00 0.00 2.44
196 197 5.934043 GCCTCATAAGAAGTTGCCAATTTTT 59.066 36.000 0.00 0.00 0.00 1.94
197 198 5.246883 AGCCTCATAAGAAGTTGCCAATTTT 59.753 36.000 0.00 0.00 0.00 1.82
198 199 4.774200 AGCCTCATAAGAAGTTGCCAATTT 59.226 37.500 0.00 0.00 0.00 1.82
199 200 4.159135 CAGCCTCATAAGAAGTTGCCAATT 59.841 41.667 0.00 0.00 0.00 2.32
200 201 3.698040 CAGCCTCATAAGAAGTTGCCAAT 59.302 43.478 0.00 0.00 0.00 3.16
201 202 3.084039 CAGCCTCATAAGAAGTTGCCAA 58.916 45.455 0.00 0.00 0.00 4.52
202 203 2.040278 ACAGCCTCATAAGAAGTTGCCA 59.960 45.455 0.00 0.00 0.00 4.92
203 204 2.680339 GACAGCCTCATAAGAAGTTGCC 59.320 50.000 0.00 0.00 0.00 4.52
204 205 3.338249 TGACAGCCTCATAAGAAGTTGC 58.662 45.455 0.00 0.00 0.00 4.17
205 206 4.999950 ACTTGACAGCCTCATAAGAAGTTG 59.000 41.667 0.00 0.00 0.00 3.16
206 207 5.234466 ACTTGACAGCCTCATAAGAAGTT 57.766 39.130 0.00 0.00 0.00 2.66
207 208 4.899352 ACTTGACAGCCTCATAAGAAGT 57.101 40.909 0.00 0.00 0.00 3.01
208 209 7.672983 TTTTACTTGACAGCCTCATAAGAAG 57.327 36.000 0.00 0.00 0.00 2.85
209 210 8.635765 AATTTTACTTGACAGCCTCATAAGAA 57.364 30.769 0.00 0.00 0.00 2.52
210 211 7.064609 CGAATTTTACTTGACAGCCTCATAAGA 59.935 37.037 0.00 0.00 0.00 2.10
211 212 7.148407 ACGAATTTTACTTGACAGCCTCATAAG 60.148 37.037 0.00 0.00 0.00 1.73
212 213 6.653320 ACGAATTTTACTTGACAGCCTCATAA 59.347 34.615 0.00 0.00 0.00 1.90
213 214 6.170506 ACGAATTTTACTTGACAGCCTCATA 58.829 36.000 0.00 0.00 0.00 2.15
214 215 5.003804 ACGAATTTTACTTGACAGCCTCAT 58.996 37.500 0.00 0.00 0.00 2.90
215 216 4.385825 ACGAATTTTACTTGACAGCCTCA 58.614 39.130 0.00 0.00 0.00 3.86
216 217 6.304882 GTTACGAATTTTACTTGACAGCCTC 58.695 40.000 0.00 0.00 0.00 4.70
217 218 5.180680 GGTTACGAATTTTACTTGACAGCCT 59.819 40.000 0.00 0.00 0.00 4.58
218 219 5.049267 TGGTTACGAATTTTACTTGACAGCC 60.049 40.000 0.00 0.00 0.00 4.85
219 220 5.992729 TGGTTACGAATTTTACTTGACAGC 58.007 37.500 0.00 0.00 0.00 4.40
220 221 8.286800 TGATTGGTTACGAATTTTACTTGACAG 58.713 33.333 0.00 0.00 0.00 3.51
221 222 8.155821 TGATTGGTTACGAATTTTACTTGACA 57.844 30.769 0.00 0.00 0.00 3.58
222 223 9.113876 CTTGATTGGTTACGAATTTTACTTGAC 57.886 33.333 0.00 0.00 0.00 3.18
223 224 7.806014 GCTTGATTGGTTACGAATTTTACTTGA 59.194 33.333 0.00 0.00 0.00 3.02
224 225 7.593273 TGCTTGATTGGTTACGAATTTTACTTG 59.407 33.333 0.00 0.00 0.00 3.16
225 226 7.593644 GTGCTTGATTGGTTACGAATTTTACTT 59.406 33.333 0.00 0.00 0.00 2.24
226 227 7.081976 GTGCTTGATTGGTTACGAATTTTACT 58.918 34.615 0.00 0.00 0.00 2.24
227 228 6.858993 TGTGCTTGATTGGTTACGAATTTTAC 59.141 34.615 0.00 0.00 0.00 2.01
228 229 6.971602 TGTGCTTGATTGGTTACGAATTTTA 58.028 32.000 0.00 0.00 0.00 1.52
229 230 5.837437 TGTGCTTGATTGGTTACGAATTTT 58.163 33.333 0.00 0.00 0.00 1.82
230 231 5.446143 TGTGCTTGATTGGTTACGAATTT 57.554 34.783 0.00 0.00 0.00 1.82
231 232 5.446143 TTGTGCTTGATTGGTTACGAATT 57.554 34.783 0.00 0.00 0.00 2.17
232 233 4.615912 GCTTGTGCTTGATTGGTTACGAAT 60.616 41.667 0.00 0.00 36.03 3.34
233 234 3.304391 GCTTGTGCTTGATTGGTTACGAA 60.304 43.478 0.00 0.00 36.03 3.85
234 235 2.225491 GCTTGTGCTTGATTGGTTACGA 59.775 45.455 0.00 0.00 36.03 3.43
235 236 2.584791 GCTTGTGCTTGATTGGTTACG 58.415 47.619 0.00 0.00 36.03 3.18
236 237 2.295909 TGGCTTGTGCTTGATTGGTTAC 59.704 45.455 0.00 0.00 39.59 2.50
237 238 2.591923 TGGCTTGTGCTTGATTGGTTA 58.408 42.857 0.00 0.00 39.59 2.85
238 239 1.412079 TGGCTTGTGCTTGATTGGTT 58.588 45.000 0.00 0.00 39.59 3.67
239 240 1.412079 TTGGCTTGTGCTTGATTGGT 58.588 45.000 0.00 0.00 39.59 3.67
240 241 2.754946 ATTGGCTTGTGCTTGATTGG 57.245 45.000 0.00 0.00 39.59 3.16
241 242 5.064198 CCAAATATTGGCTTGTGCTTGATTG 59.936 40.000 0.00 0.00 45.17 2.67
242 243 5.180271 CCAAATATTGGCTTGTGCTTGATT 58.820 37.500 0.00 0.00 45.17 2.57
243 244 4.761975 CCAAATATTGGCTTGTGCTTGAT 58.238 39.130 0.00 0.00 45.17 2.57
244 245 4.191033 CCAAATATTGGCTTGTGCTTGA 57.809 40.909 0.00 0.00 45.17 3.02
273 274 6.797995 GTCAAAAATTAGCATGCCAACATTTG 59.202 34.615 21.51 21.51 32.87 2.32
274 275 6.485984 TGTCAAAAATTAGCATGCCAACATTT 59.514 30.769 15.66 9.61 32.87 2.32
275 276 5.996513 TGTCAAAAATTAGCATGCCAACATT 59.003 32.000 15.66 3.45 32.87 2.71
276 277 5.549347 TGTCAAAAATTAGCATGCCAACAT 58.451 33.333 15.66 0.00 36.79 2.71
277 278 4.953667 TGTCAAAAATTAGCATGCCAACA 58.046 34.783 15.66 0.00 0.00 3.33
278 279 5.638657 TGATGTCAAAAATTAGCATGCCAAC 59.361 36.000 15.66 0.36 0.00 3.77
279 280 5.791666 TGATGTCAAAAATTAGCATGCCAA 58.208 33.333 15.66 7.75 0.00 4.52
280 281 5.402997 TGATGTCAAAAATTAGCATGCCA 57.597 34.783 15.66 0.00 0.00 4.92
281 282 6.402442 GGTTTGATGTCAAAAATTAGCATGCC 60.402 38.462 15.66 0.00 46.08 4.40
282 283 6.147492 TGGTTTGATGTCAAAAATTAGCATGC 59.853 34.615 10.51 10.51 46.08 4.06
283 284 7.655236 TGGTTTGATGTCAAAAATTAGCATG 57.345 32.000 9.55 0.00 46.08 4.06
284 285 8.851541 ATTGGTTTGATGTCAAAAATTAGCAT 57.148 26.923 9.55 0.00 46.08 3.79
285 286 7.930325 TGATTGGTTTGATGTCAAAAATTAGCA 59.070 29.630 9.55 1.70 46.08 3.49
286 287 8.309163 TGATTGGTTTGATGTCAAAAATTAGC 57.691 30.769 9.55 0.00 46.08 3.09
288 289 8.719648 GCATGATTGGTTTGATGTCAAAAATTA 58.280 29.630 9.55 5.19 46.08 1.40
289 290 7.446013 AGCATGATTGGTTTGATGTCAAAAATT 59.554 29.630 9.55 0.00 46.08 1.82
290 291 6.938030 AGCATGATTGGTTTGATGTCAAAAAT 59.062 30.769 9.55 7.28 46.08 1.82
291 292 6.289834 AGCATGATTGGTTTGATGTCAAAAA 58.710 32.000 9.55 2.99 46.08 1.94
292 293 5.856156 AGCATGATTGGTTTGATGTCAAAA 58.144 33.333 9.55 0.00 46.08 2.44
293 294 5.471556 AGCATGATTGGTTTGATGTCAAA 57.528 34.783 0.00 4.16 42.90 2.69
294 295 5.471556 AAGCATGATTGGTTTGATGTCAA 57.528 34.783 0.00 0.00 40.57 3.18
303 304 9.995003 TTTCTAAACATAAAAGCATGATTGGTT 57.005 25.926 0.00 0.00 45.16 3.67
304 305 9.423061 GTTTCTAAACATAAAAGCATGATTGGT 57.577 29.630 0.00 0.00 38.74 3.67
305 306 8.586273 CGTTTCTAAACATAAAAGCATGATTGG 58.414 33.333 0.00 0.00 38.81 3.16
306 307 8.586273 CCGTTTCTAAACATAAAAGCATGATTG 58.414 33.333 0.00 0.00 38.81 2.67
307 308 8.519526 TCCGTTTCTAAACATAAAAGCATGATT 58.480 29.630 0.00 0.00 38.81 2.57
308 309 8.050778 TCCGTTTCTAAACATAAAAGCATGAT 57.949 30.769 0.00 0.00 38.81 2.45
309 310 7.361713 CCTCCGTTTCTAAACATAAAAGCATGA 60.362 37.037 0.00 0.00 38.81 3.07
310 311 6.747280 CCTCCGTTTCTAAACATAAAAGCATG 59.253 38.462 6.41 0.00 38.81 4.06
311 312 6.127730 CCCTCCGTTTCTAAACATAAAAGCAT 60.128 38.462 6.41 0.00 38.81 3.79
312 313 5.182380 CCCTCCGTTTCTAAACATAAAAGCA 59.818 40.000 6.41 0.00 38.81 3.91
313 314 5.413523 TCCCTCCGTTTCTAAACATAAAAGC 59.586 40.000 6.41 0.00 38.81 3.51
314 315 6.653740 ACTCCCTCCGTTTCTAAACATAAAAG 59.346 38.462 6.41 0.00 38.81 2.27
315 316 6.536447 ACTCCCTCCGTTTCTAAACATAAAA 58.464 36.000 6.41 0.00 38.81 1.52
316 317 6.117975 ACTCCCTCCGTTTCTAAACATAAA 57.882 37.500 6.41 0.00 38.81 1.40
317 318 5.750352 ACTCCCTCCGTTTCTAAACATAA 57.250 39.130 6.41 0.00 38.81 1.90
318 319 5.127682 GGTACTCCCTCCGTTTCTAAACATA 59.872 44.000 6.41 0.00 38.81 2.29
319 320 4.081254 GGTACTCCCTCCGTTTCTAAACAT 60.081 45.833 6.41 0.00 38.81 2.71
320 321 3.259123 GGTACTCCCTCCGTTTCTAAACA 59.741 47.826 6.41 0.00 38.81 2.83
321 322 3.513119 AGGTACTCCCTCCGTTTCTAAAC 59.487 47.826 0.00 0.00 40.71 2.01
322 323 3.782992 AGGTACTCCCTCCGTTTCTAAA 58.217 45.455 0.00 0.00 40.71 1.85
323 324 3.463048 AGGTACTCCCTCCGTTTCTAA 57.537 47.619 0.00 0.00 40.71 2.10
408 853 3.160748 GAGGGAGAGAGCAGGGCC 61.161 72.222 0.00 0.00 0.00 5.80
413 858 0.550914 GAGAGAGGAGGGAGAGAGCA 59.449 60.000 0.00 0.00 0.00 4.26
414 859 0.178990 GGAGAGAGGAGGGAGAGAGC 60.179 65.000 0.00 0.00 0.00 4.09
415 860 1.421646 GAGGAGAGAGGAGGGAGAGAG 59.578 61.905 0.00 0.00 0.00 3.20
416 861 1.518367 GAGGAGAGAGGAGGGAGAGA 58.482 60.000 0.00 0.00 0.00 3.10
449 894 2.464459 GGCTGGGATGCGTTTCTCG 61.464 63.158 0.00 0.00 43.12 4.04
451 896 2.044946 GGGCTGGGATGCGTTTCT 60.045 61.111 0.00 0.00 0.00 2.52
540 2233 3.155167 CCAGGCTACGGGGGAGAC 61.155 72.222 0.00 0.00 0.00 3.36
748 2441 3.861840 CGAGAAAATTACCAGCCAGAGA 58.138 45.455 0.00 0.00 0.00 3.10
775 2468 4.126437 CCAATTCACCAAAAGACCAAACC 58.874 43.478 0.00 0.00 0.00 3.27
780 2473 5.469479 CATACACCAATTCACCAAAAGACC 58.531 41.667 0.00 0.00 0.00 3.85
782 2475 4.586421 TGCATACACCAATTCACCAAAAGA 59.414 37.500 0.00 0.00 0.00 2.52
783 2476 4.880759 TGCATACACCAATTCACCAAAAG 58.119 39.130 0.00 0.00 0.00 2.27
784 2477 4.944619 TGCATACACCAATTCACCAAAA 57.055 36.364 0.00 0.00 0.00 2.44
835 2528 4.618338 TTTCAGTTCGACGTTTACATCG 57.382 40.909 0.00 0.00 39.72 3.84
847 2542 8.931385 ATCCATTCCATTTAAATTTCAGTTCG 57.069 30.769 0.00 0.00 0.00 3.95
960 2663 1.518903 GCCAGTTGTGAAGCCAGGAC 61.519 60.000 0.00 0.00 0.00 3.85
973 2676 2.254152 TACTGAGATGGGAGCCAGTT 57.746 50.000 0.00 0.00 40.07 3.16
1030 2733 2.842462 TGACTGTCTGGGGCACGT 60.842 61.111 9.51 0.00 0.00 4.49
1122 2825 4.461431 GGACTTTTGGGGATTCGTGTAAAT 59.539 41.667 0.00 0.00 0.00 1.40
1236 2942 6.917033 CGAGTACGAGTACTGGAAGTCGAAT 61.917 48.000 19.29 0.00 45.63 3.34
1302 3008 2.197605 AAAGGGCGAAAACCGGGTG 61.198 57.895 6.32 0.00 39.04 4.61
1365 3080 1.544825 CCTCTCTGTTCCCTTCGGCA 61.545 60.000 0.00 0.00 0.00 5.69
1396 3117 2.577700 CTCATCCCTACTACTCGCACT 58.422 52.381 0.00 0.00 0.00 4.40
1399 3120 1.609555 CACCTCATCCCTACTACTCGC 59.390 57.143 0.00 0.00 0.00 5.03
1405 3126 1.207791 CCAAGCACCTCATCCCTACT 58.792 55.000 0.00 0.00 0.00 2.57
1515 3236 0.755079 TCAGCACTGAGTTGAGCACT 59.245 50.000 0.00 0.00 39.07 4.40
1541 3267 8.734386 GGACAACTAAAATCATCAGACAGAAAT 58.266 33.333 0.00 0.00 0.00 2.17
1581 3307 3.193267 TGTGCAATAAGATTGGGAGTTGC 59.807 43.478 0.00 0.00 41.53 4.17
1585 3311 6.400568 ACAAAATGTGCAATAAGATTGGGAG 58.599 36.000 0.00 0.00 0.00 4.30
1657 4339 5.125356 TGCAATCTTTTCTCACAGACTTGA 58.875 37.500 0.00 0.00 0.00 3.02
1661 4343 8.976986 AAAATATGCAATCTTTTCTCACAGAC 57.023 30.769 0.00 0.00 27.84 3.51
1717 4399 6.207417 ACAATGGCACTTTCCATATACTATGC 59.793 38.462 0.00 0.00 45.64 3.14
1747 4549 3.119291 CAACAACATAAGCCGCACAAAA 58.881 40.909 0.00 0.00 0.00 2.44
1755 4557 2.061028 GCAGTTGCAACAACATAAGCC 58.939 47.619 30.11 0.04 41.59 4.35
1757 4559 6.615088 AGAATAGCAGTTGCAACAACATAAG 58.385 36.000 30.11 11.96 45.16 1.73
1775 4577 9.218359 CACGAATGATCAAATGTTCAAGAATAG 57.782 33.333 0.00 0.00 0.00 1.73
1779 4581 6.558771 ACACGAATGATCAAATGTTCAAGA 57.441 33.333 0.00 0.00 0.00 3.02
1780 4582 6.467047 GCTACACGAATGATCAAATGTTCAAG 59.533 38.462 0.00 0.00 0.00 3.02
1818 4620 4.580580 GGGAATGCCTTCGAAGATAAATGT 59.419 41.667 26.61 4.68 35.04 2.71
1824 4626 2.025887 ACAAGGGAATGCCTTCGAAGAT 60.026 45.455 26.61 10.10 35.04 2.40
1829 4631 0.811281 GGAACAAGGGAATGCCTTCG 59.189 55.000 2.07 2.38 31.75 3.79
1830 4632 1.821136 CAGGAACAAGGGAATGCCTTC 59.179 52.381 2.07 0.00 0.00 3.46
1833 4635 0.613012 AGCAGGAACAAGGGAATGCC 60.613 55.000 0.00 0.00 34.24 4.40
1860 4662 2.506644 TCCCTGAGAACATGATGCATCA 59.493 45.455 30.47 30.47 41.70 3.07
1865 4667 3.693085 CACCTTTCCCTGAGAACATGATG 59.307 47.826 0.00 0.00 32.95 3.07
1866 4668 3.308688 CCACCTTTCCCTGAGAACATGAT 60.309 47.826 0.00 0.00 32.95 2.45
1869 4671 2.065799 ACCACCTTTCCCTGAGAACAT 58.934 47.619 0.00 0.00 32.95 2.71
1885 4687 6.213677 TCGAGCATATTATGAGTTACACCAC 58.786 40.000 7.87 0.00 0.00 4.16
1943 4745 3.445096 CCCCAAGACATTTGATTCTGACC 59.555 47.826 0.00 0.00 0.00 4.02
2040 4842 5.073428 ACAGAAAAAGAGAGTTCAATCCCC 58.927 41.667 0.00 0.00 0.00 4.81
2072 4874 8.933807 CGCTCACATCAGAAATTGATAGATAAT 58.066 33.333 0.00 0.00 44.76 1.28
2078 4880 4.034394 GTGCGCTCACATCAGAAATTGATA 59.966 41.667 9.73 0.00 44.76 2.15
2264 5066 3.223674 TCCTCAAAAGTCAACCCTTCC 57.776 47.619 0.00 0.00 0.00 3.46
2305 5107 1.217882 CGGTGGCGAATGTAATCCTC 58.782 55.000 0.00 0.00 0.00 3.71
2381 5183 8.580720 ACAAGATAATGAGATAGAAGTATGCGT 58.419 33.333 0.00 0.00 0.00 5.24
2445 5284 2.286872 CCATTCCTAGCTGCACAAGAG 58.713 52.381 1.02 0.00 0.00 2.85
2513 5352 3.614616 GCAATCTAGTCTCACAACTTCCG 59.385 47.826 0.00 0.00 0.00 4.30
2541 5380 0.673333 TGCAATCACTAGTGCCGGTG 60.673 55.000 18.45 12.95 45.98 4.94
2542 5381 0.036164 TTGCAATCACTAGTGCCGGT 59.964 50.000 18.45 1.26 45.98 5.28
2543 5382 1.164411 TTTGCAATCACTAGTGCCGG 58.836 50.000 18.45 10.12 45.98 6.13
2547 5386 6.364165 CACCAATTCTTTTGCAATCACTAGTG 59.636 38.462 17.17 17.17 0.00 2.74
2564 5403 1.335872 CCCGCAACTTCACACCAATTC 60.336 52.381 0.00 0.00 0.00 2.17
2578 5417 2.192664 ATGTCACAACATACCCGCAA 57.807 45.000 0.00 0.00 44.38 4.85
2581 5420 6.984474 AGTATTAGAATGTCACAACATACCCG 59.016 38.462 0.00 0.00 45.48 5.28
2626 5465 9.671279 TTGATCTTTCTTATGAATGCAAGACTA 57.329 29.630 0.00 0.00 30.67 2.59
2642 5481 2.915604 TCCAGGCTTCCTTGATCTTTCT 59.084 45.455 0.00 0.00 0.00 2.52
2644 5483 3.814504 TTCCAGGCTTCCTTGATCTTT 57.185 42.857 0.00 0.00 0.00 2.52
2649 5488 8.429237 TTTATTTATTTTCCAGGCTTCCTTGA 57.571 30.769 0.00 0.00 0.00 3.02
2653 5492 9.665719 TTGAATTTATTTATTTTCCAGGCTTCC 57.334 29.630 0.00 0.00 0.00 3.46
2686 5525 6.127479 ACACCAGCAAACTTGTTTGATTAGAA 60.127 34.615 24.85 0.00 33.95 2.10
2699 5538 4.283722 AGCTAACTACTACACCAGCAAACT 59.716 41.667 0.00 0.00 0.00 2.66
2702 5541 4.566004 CAAGCTAACTACTACACCAGCAA 58.434 43.478 0.00 0.00 0.00 3.91
2756 5595 4.948847 TGCATCTATGACGAGCTAATTGT 58.051 39.130 0.00 0.00 0.00 2.71
2759 5598 3.583806 GCTGCATCTATGACGAGCTAAT 58.416 45.455 0.00 0.00 0.00 1.73
2762 5601 0.033228 GGCTGCATCTATGACGAGCT 59.967 55.000 0.50 0.00 0.00 4.09
2773 5612 4.946157 AGGCATATTATACTTGGCTGCATC 59.054 41.667 0.50 0.00 43.70 3.91
2781 5620 9.277783 AGCAAGTTCTAAGGCATATTATACTTG 57.722 33.333 0.00 0.00 38.55 3.16
2789 5629 8.986929 AATTCTAAGCAAGTTCTAAGGCATAT 57.013 30.769 0.00 0.00 0.00 1.78
2817 5657 3.569701 TGCAAAGGAAATGTCTTCTGTCC 59.430 43.478 0.00 0.00 0.00 4.02
2830 5670 4.265893 TCTACTGTTGTGTTGCAAAGGAA 58.734 39.130 0.00 0.00 39.03 3.36
2854 5695 8.265055 TGGTTTCTATAGTAAATTCTCCAGTGG 58.735 37.037 1.40 1.40 0.00 4.00
2864 5705 8.268878 AGGAGCATCTGGTTTCTATAGTAAAT 57.731 34.615 0.00 0.00 33.73 1.40
2870 5711 8.034313 ACATAAAGGAGCATCTGGTTTCTATA 57.966 34.615 0.00 0.00 33.73 1.31
2879 5720 6.748333 TTTCAAGACATAAAGGAGCATCTG 57.252 37.500 0.00 0.00 33.73 2.90
2884 5725 6.024049 CGATGTTTTCAAGACATAAAGGAGC 58.976 40.000 0.00 0.00 37.83 4.70
2894 5735 3.003275 TCCAACTGCGATGTTTTCAAGAC 59.997 43.478 0.00 0.00 0.00 3.01
2900 5741 2.297033 AGCATTCCAACTGCGATGTTTT 59.703 40.909 0.00 0.00 44.38 2.43
2907 5748 5.640732 AGTTAAATAAGCATTCCAACTGCG 58.359 37.500 0.00 0.00 44.38 5.18
2911 5752 7.814587 AGAGCAAAGTTAAATAAGCATTCCAAC 59.185 33.333 2.98 0.00 0.00 3.77
2934 5776 5.557891 ATGAAATCGAAGGAAGCAAAGAG 57.442 39.130 0.00 0.00 0.00 2.85
2936 5778 5.586243 TCCTATGAAATCGAAGGAAGCAAAG 59.414 40.000 0.00 0.00 35.20 2.77
2940 5782 6.433766 CAAATCCTATGAAATCGAAGGAAGC 58.566 40.000 5.41 0.00 41.33 3.86
2941 5783 6.543831 ACCAAATCCTATGAAATCGAAGGAAG 59.456 38.462 5.41 0.16 41.33 3.46
2948 5790 6.441274 CATGGAACCAAATCCTATGAAATCG 58.559 40.000 0.00 0.00 40.35 3.34
2950 5792 5.662208 TGCATGGAACCAAATCCTATGAAAT 59.338 36.000 0.00 0.00 40.35 2.17
3062 5904 0.883833 GGTCCAGCTTCATTGTGGTG 59.116 55.000 0.00 5.22 32.73 4.17
3069 5911 0.252881 TCCTCCTGGTCCAGCTTCAT 60.253 55.000 13.99 0.00 34.23 2.57
3073 5915 1.305718 GAGTCCTCCTGGTCCAGCT 60.306 63.158 13.99 4.47 34.23 4.24
3076 5918 0.542938 CTGTGAGTCCTCCTGGTCCA 60.543 60.000 0.00 0.00 34.23 4.02
3077 5919 0.543174 ACTGTGAGTCCTCCTGGTCC 60.543 60.000 0.00 0.00 34.23 4.46
3079 5921 1.893210 GCTACTGTGAGTCCTCCTGGT 60.893 57.143 0.00 0.00 34.23 4.00
3080 5922 0.820871 GCTACTGTGAGTCCTCCTGG 59.179 60.000 0.00 0.00 0.00 4.45
3083 5925 0.174617 GCTGCTACTGTGAGTCCTCC 59.825 60.000 0.00 0.00 0.00 4.30
3085 5927 1.274728 CAAGCTGCTACTGTGAGTCCT 59.725 52.381 0.90 0.00 0.00 3.85
3086 5928 1.719600 CAAGCTGCTACTGTGAGTCC 58.280 55.000 0.90 0.00 0.00 3.85
3087 5929 1.074752 GCAAGCTGCTACTGTGAGTC 58.925 55.000 0.90 0.00 40.96 3.36
3122 6061 4.333926 GGAAGTCATACAAGTCATCCAAGC 59.666 45.833 0.00 0.00 0.00 4.01
3123 6062 5.352569 GTGGAAGTCATACAAGTCATCCAAG 59.647 44.000 0.00 0.00 37.45 3.61
3128 6067 4.462834 TCTCGTGGAAGTCATACAAGTCAT 59.537 41.667 0.00 0.00 0.00 3.06
3130 6069 4.436242 TCTCGTGGAAGTCATACAAGTC 57.564 45.455 0.00 0.00 0.00 3.01
3135 6074 2.120232 CGCATCTCGTGGAAGTCATAC 58.880 52.381 0.00 0.00 0.00 2.39
3137 6076 3.352447 CGCATCTCGTGGAAGTCAT 57.648 52.632 0.00 0.00 0.00 3.06
3147 6086 0.171231 TCTCCAGTGAACGCATCTCG 59.829 55.000 0.00 0.00 45.38 4.04
3154 6093 0.798776 GTGGCATTCTCCAGTGAACG 59.201 55.000 0.00 0.00 36.67 3.95
3169 6108 5.779922 TGTAATCTAACGATAGATGGTGGC 58.220 41.667 15.11 5.88 46.01 5.01
3185 6124 5.762218 GCAGATCCTTATGTTGCTGTAATCT 59.238 40.000 0.00 0.00 0.00 2.40
3193 6132 3.539604 AGACTGCAGATCCTTATGTTGC 58.460 45.455 23.35 0.00 35.42 4.17
3196 6135 4.343526 CCTGTAGACTGCAGATCCTTATGT 59.656 45.833 23.35 0.00 36.12 2.29
3197 6136 4.586421 TCCTGTAGACTGCAGATCCTTATG 59.414 45.833 23.35 2.94 36.12 1.90
3218 6157 6.500684 TTGACAAGCAACTAGATCATTTCC 57.499 37.500 0.00 0.00 0.00 3.13
3230 6169 5.164022 GCAGCAAGAAATATTGACAAGCAAC 60.164 40.000 0.00 0.00 39.78 4.17
3234 6173 5.706916 ACAGCAGCAAGAAATATTGACAAG 58.293 37.500 0.00 0.00 31.55 3.16
3241 6180 5.251764 ACTTCAGACAGCAGCAAGAAATAT 58.748 37.500 0.00 0.00 0.00 1.28
3242 6181 4.645535 ACTTCAGACAGCAGCAAGAAATA 58.354 39.130 0.00 0.00 0.00 1.40
3258 6198 9.307121 ACATAATCTCGAGACAAATTACTTCAG 57.693 33.333 19.30 4.54 0.00 3.02
3270 6210 2.859032 GCGGTCCACATAATCTCGAGAC 60.859 54.545 19.30 1.89 0.00 3.36
3274 6215 1.209128 GTGCGGTCCACATAATCTCG 58.791 55.000 0.00 0.00 44.06 4.04
3290 6231 2.175878 ACATCACTCTCCTGTTGTGC 57.824 50.000 0.00 0.00 0.00 4.57
3291 6232 4.000331 AGAACATCACTCTCCTGTTGTG 58.000 45.455 0.00 0.00 33.46 3.33
3297 6238 6.014242 TCACACAAATAGAACATCACTCTCCT 60.014 38.462 0.00 0.00 0.00 3.69
3298 6239 6.166279 TCACACAAATAGAACATCACTCTCC 58.834 40.000 0.00 0.00 0.00 3.71
3301 6249 7.658179 TCTTCACACAAATAGAACATCACTC 57.342 36.000 0.00 0.00 0.00 3.51
3306 6254 9.736023 GTCTTTTTCTTCACACAAATAGAACAT 57.264 29.630 0.00 0.00 0.00 2.71
3307 6255 8.735315 TGTCTTTTTCTTCACACAAATAGAACA 58.265 29.630 0.00 0.00 0.00 3.18
3308 6256 9.567848 TTGTCTTTTTCTTCACACAAATAGAAC 57.432 29.630 0.00 0.00 0.00 3.01
3326 6274 8.748412 TGCTGCATACCTTATAAATTGTCTTTT 58.252 29.630 0.00 0.00 0.00 2.27
3374 6561 1.301401 TACTGCTGACCGTGGCAAC 60.301 57.895 0.00 0.00 38.02 4.17
3379 6566 0.317160 TGGAAGTACTGCTGACCGTG 59.683 55.000 0.00 0.00 0.00 4.94
3404 6591 2.158842 CGGAAGGCTGAAGATGAATCCT 60.159 50.000 0.00 0.00 0.00 3.24
3419 6606 2.726351 GGAGCCAGAGGACGGAAGG 61.726 68.421 0.00 0.00 0.00 3.46
3420 6607 2.726351 GGGAGCCAGAGGACGGAAG 61.726 68.421 0.00 0.00 0.00 3.46
3424 6611 3.775654 GGTGGGAGCCAGAGGACG 61.776 72.222 0.00 0.00 32.34 4.79
3434 6621 3.507377 AAAACTGCGGGGGTGGGAG 62.507 63.158 0.00 0.00 0.00 4.30
3436 6623 3.302344 CAAAACTGCGGGGGTGGG 61.302 66.667 0.00 0.00 0.00 4.61
3437 6624 3.302344 CCAAAACTGCGGGGGTGG 61.302 66.667 0.00 0.00 0.00 4.61
3439 6626 1.530655 CTTCCAAAACTGCGGGGGT 60.531 57.895 0.00 0.00 0.00 4.95
3442 6630 0.310854 GACACTTCCAAAACTGCGGG 59.689 55.000 0.00 0.00 0.00 6.13
3526 6714 9.140874 TGTGAATCACATGTCTAGAGATTCTAT 57.859 33.333 24.71 7.23 41.01 1.98
3527 6715 8.525290 TGTGAATCACATGTCTAGAGATTCTA 57.475 34.615 24.71 16.36 41.01 2.10
3621 6811 4.526262 TGTGTTAATCCATCCACCAAAAGG 59.474 41.667 0.00 0.00 0.00 3.11
3705 6898 2.540931 CTCTTTGCAACAACATTGGCAC 59.459 45.455 0.00 0.00 35.74 5.01
3709 6902 5.749588 TGATCAACTCTTTGCAACAACATTG 59.250 36.000 0.00 0.92 32.17 2.82
3808 7001 1.266718 TCTTGTGGTGCGAATGCTTTC 59.733 47.619 2.28 2.28 43.34 2.62
3817 7010 0.317269 CACAGCTTTCTTGTGGTGCG 60.317 55.000 0.00 0.00 35.37 5.34
3894 7087 7.968246 TGCGAAGAGAAGAGAATTTTTCATAG 58.032 34.615 0.00 0.00 0.00 2.23
3898 7091 7.690224 GTGTATGCGAAGAGAAGAGAATTTTTC 59.310 37.037 0.00 0.00 0.00 2.29
3908 7101 2.959516 TGTGGTGTATGCGAAGAGAAG 58.040 47.619 0.00 0.00 0.00 2.85
3916 7109 2.095314 TGCAAATCTTGTGGTGTATGCG 60.095 45.455 0.00 0.00 35.40 4.73
3975 7168 9.856162 TTAAGATTATAGTTAGGCGGGAAAAAT 57.144 29.630 0.00 0.00 0.00 1.82
3976 7169 9.112725 GTTAAGATTATAGTTAGGCGGGAAAAA 57.887 33.333 0.00 0.00 0.00 1.94
4000 7193 8.360390 GGATTGAAAGGATTGAAGTAACAAGTT 58.640 33.333 0.00 0.00 33.22 2.66
4001 7194 7.039714 GGGATTGAAAGGATTGAAGTAACAAGT 60.040 37.037 0.00 0.00 33.22 3.16
4002 7195 7.039784 TGGGATTGAAAGGATTGAAGTAACAAG 60.040 37.037 0.00 0.00 33.22 3.16
4003 7196 6.780031 TGGGATTGAAAGGATTGAAGTAACAA 59.220 34.615 0.00 0.00 0.00 2.83
4004 7197 6.310941 TGGGATTGAAAGGATTGAAGTAACA 58.689 36.000 0.00 0.00 0.00 2.41
4005 7198 6.625960 GCTGGGATTGAAAGGATTGAAGTAAC 60.626 42.308 0.00 0.00 0.00 2.50
4012 7205 3.359033 TGAGCTGGGATTGAAAGGATTG 58.641 45.455 0.00 0.00 0.00 2.67
4030 7223 5.188434 TCAAAAGGTATGCAGAAGGATGAG 58.812 41.667 0.00 0.00 0.00 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.