Multiple sequence alignment - TraesCS6A01G111000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G111000 chr6A 100.000 5468 0 0 1 5468 80518721 80513254 0.000000e+00 10098.0
1 TraesCS6A01G111000 chr6A 93.793 580 34 2 1 578 169950452 169949873 0.000000e+00 870.0
2 TraesCS6A01G111000 chr6A 92.188 64 3 2 1676 1737 463530948 463530885 7.540000e-14 89.8
3 TraesCS6A01G111000 chr6A 93.478 46 3 0 2923 2968 80515741 80515696 9.830000e-08 69.4
4 TraesCS6A01G111000 chr6A 93.478 46 3 0 2981 3026 80515799 80515754 9.830000e-08 69.4
5 TraesCS6A01G111000 chr6B 90.456 3311 252 34 1931 5219 136451919 136448651 0.000000e+00 4305.0
6 TraesCS6A01G111000 chr6B 90.577 520 32 11 749 1262 136454396 136453888 0.000000e+00 673.0
7 TraesCS6A01G111000 chr6B 83.232 495 44 16 1408 1880 136452393 136451916 8.470000e-113 418.0
8 TraesCS6A01G111000 chr6B 87.671 73 7 2 1667 1737 713833468 713833540 3.510000e-12 84.2
9 TraesCS6A01G111000 chr6B 87.671 73 7 2 1667 1737 713937507 713937579 3.510000e-12 84.2
10 TraesCS6A01G111000 chr6B 100.000 36 0 0 2981 3016 136450941 136450906 3.530000e-07 67.6
11 TraesCS6A01G111000 chr7D 88.899 2189 195 24 2698 4858 446431181 446429013 0.000000e+00 2652.0
12 TraesCS6A01G111000 chr7D 79.939 1301 206 31 2782 4043 446351730 446350446 0.000000e+00 905.0
13 TraesCS6A01G111000 chr7D 93.793 580 34 2 1 578 101487237 101486658 0.000000e+00 870.0
14 TraesCS6A01G111000 chr7D 89.917 605 48 9 692 1294 446432623 446432030 0.000000e+00 767.0
15 TraesCS6A01G111000 chr7D 81.250 480 58 21 1785 2245 446431731 446431265 5.210000e-95 359.0
16 TraesCS6A01G111000 chr7D 84.097 371 47 8 4141 4510 446349707 446349348 1.130000e-91 348.0
17 TraesCS6A01G111000 chr7D 88.382 241 25 2 1021 1261 446354382 446354145 2.490000e-73 287.0
18 TraesCS6A01G111000 chr7D 87.654 243 30 0 1023 1265 446315674 446315432 3.220000e-72 283.0
19 TraesCS6A01G111000 chr7D 86.321 212 22 4 1377 1582 446431987 446431777 1.980000e-54 224.0
20 TraesCS6A01G111000 chr7D 90.278 72 4 3 1307 1376 550642071 550642141 2.100000e-14 91.6
21 TraesCS6A01G111000 chr7D 85.714 77 9 2 1663 1737 34378746 34378822 4.540000e-11 80.5
22 TraesCS6A01G111000 chr7D 89.231 65 6 1 1676 1739 298458463 298458399 4.540000e-11 80.5
23 TraesCS6A01G111000 chr7D 85.714 77 9 2 1663 1737 632404592 632404668 4.540000e-11 80.5
24 TraesCS6A01G111000 chr7D 97.222 36 1 0 2981 3016 446430956 446430921 1.640000e-05 62.1
25 TraesCS6A01G111000 chr7D 100.000 29 0 0 1640 1668 162700641 162700613 3.000000e-03 54.7
26 TraesCS6A01G111000 chr7A 86.841 2219 203 44 2669 4858 497278506 497276348 0.000000e+00 2398.0
27 TraesCS6A01G111000 chr7A 88.870 584 46 12 692 1261 497280223 497279645 0.000000e+00 701.0
28 TraesCS6A01G111000 chr7A 86.813 182 19 2 1406 1582 497279570 497279389 1.200000e-46 198.0
29 TraesCS6A01G111000 chr7A 84.848 198 17 8 1911 2099 497279191 497278998 2.600000e-43 187.0
30 TraesCS6A01G111000 chr7B 89.307 1861 160 16 3020 4858 463035503 463033660 0.000000e+00 2298.0
31 TraesCS6A01G111000 chr7B 79.426 1254 204 31 2753 3969 462864563 462863327 0.000000e+00 837.0
32 TraesCS6A01G111000 chr7B 88.169 617 46 16 692 1305 463038177 463037585 0.000000e+00 710.0
33 TraesCS6A01G111000 chr7B 83.288 371 51 7 4141 4510 462862909 462862549 1.140000e-86 331.0
34 TraesCS6A01G111000 chr7B 91.632 239 18 2 2698 2935 463035797 463035560 4.080000e-86 329.0
35 TraesCS6A01G111000 chr7B 87.243 243 31 0 1023 1265 462818867 462818625 1.500000e-70 278.0
36 TraesCS6A01G111000 chr7B 86.722 241 27 4 1021 1261 462880296 462880061 4.200000e-66 263.0
37 TraesCS6A01G111000 chr7B 83.019 212 29 4 1377 1582 463037232 463037022 9.350000e-43 185.0
38 TraesCS6A01G111000 chr7B 82.099 162 18 7 1438 1588 462879980 462879819 1.600000e-25 128.0
39 TraesCS6A01G111000 chr7B 86.916 107 12 2 2546 2651 460586706 460586811 9.620000e-23 119.0
40 TraesCS6A01G111000 chr7B 85.437 103 13 2 2549 2650 138034929 138034828 7.490000e-19 106.0
41 TraesCS6A01G111000 chr6D 83.960 1490 128 44 1362 2789 62819870 62818430 0.000000e+00 1325.0
42 TraesCS6A01G111000 chr6D 90.670 418 28 6 849 1258 62820386 62819972 3.720000e-151 545.0
43 TraesCS6A01G111000 chr6D 87.831 189 20 3 674 860 62875715 62875528 9.220000e-53 219.0
44 TraesCS6A01G111000 chr6D 87.671 73 7 1 1667 1737 446899075 446899147 3.510000e-12 84.2
45 TraesCS6A01G111000 chr6D 91.379 58 5 0 1665 1722 50742265 50742322 4.540000e-11 80.5
46 TraesCS6A01G111000 chr6D 86.667 75 6 4 1666 1737 196357994 196357921 4.540000e-11 80.5
47 TraesCS6A01G111000 chr6D 89.655 58 6 0 1667 1724 99730205 99730262 2.110000e-09 75.0
48 TraesCS6A01G111000 chr6D 85.135 74 9 2 1666 1737 469612209 469612282 2.110000e-09 75.0
49 TraesCS6A01G111000 chr6D 84.932 73 9 2 1667 1737 291236927 291236999 7.600000e-09 73.1
50 TraesCS6A01G111000 chr2A 94.609 575 27 4 1 572 758540564 758541137 0.000000e+00 887.0
51 TraesCS6A01G111000 chr2A 92.800 250 17 1 5220 5468 764836999 764836750 1.450000e-95 361.0
52 TraesCS6A01G111000 chr2A 91.566 249 21 0 5220 5468 167740367 167740119 1.460000e-90 344.0
53 TraesCS6A01G111000 chr2A 82.677 127 16 6 1664 1786 632952996 632952872 2.080000e-19 108.0
54 TraesCS6A01G111000 chr2A 78.788 165 28 7 1632 1791 177665322 177665160 2.690000e-18 104.0
55 TraesCS6A01G111000 chr1B 94.425 574 29 3 1 572 491719543 491720115 0.000000e+00 880.0
56 TraesCS6A01G111000 chr1B 94.077 574 32 2 1 572 12741580 12742153 0.000000e+00 870.0
57 TraesCS6A01G111000 chr1B 81.991 211 37 1 2438 2647 171036142 171036352 1.570000e-40 178.0
58 TraesCS6A01G111000 chr1B 86.667 75 8 2 1665 1737 426466168 426466242 1.260000e-11 82.4
59 TraesCS6A01G111000 chrUn 94.077 574 32 2 1 572 304340645 304341218 0.000000e+00 870.0
60 TraesCS6A01G111000 chrUn 82.474 97 11 4 1632 1722 16901750 16901654 4.540000e-11 80.5
61 TraesCS6A01G111000 chrUn 88.889 63 5 2 1677 1737 29029276 29029214 5.870000e-10 76.8
62 TraesCS6A01G111000 chrUn 85.333 75 9 2 1665 1737 86630979 86631053 5.870000e-10 76.8
63 TraesCS6A01G111000 chrUn 81.522 92 15 2 2565 2655 89033798 89033888 2.110000e-09 75.0
64 TraesCS6A01G111000 chrUn 90.909 55 5 0 1677 1731 272115027 272115081 2.110000e-09 75.0
65 TraesCS6A01G111000 chrUn 89.474 57 6 0 1666 1722 37403241 37403297 7.600000e-09 73.1
66 TraesCS6A01G111000 chrUn 89.286 56 6 0 1667 1722 316200539 316200594 2.730000e-08 71.3
67 TraesCS6A01G111000 chrUn 84.211 76 9 3 1664 1737 320256095 320256169 2.730000e-08 71.3
68 TraesCS6A01G111000 chrUn 84.211 76 9 3 1664 1737 357700745 357700819 2.730000e-08 71.3
69 TraesCS6A01G111000 chrUn 83.117 77 11 2 1663 1737 29722135 29722059 9.830000e-08 69.4
70 TraesCS6A01G111000 chrUn 86.441 59 8 0 1666 1724 132121147 132121205 1.270000e-06 65.8
71 TraesCS6A01G111000 chrUn 85.484 62 9 0 1663 1724 359670008 359670069 1.270000e-06 65.8
72 TraesCS6A01G111000 chr3A 93.793 580 34 2 1 578 459062203 459061624 0.000000e+00 870.0
73 TraesCS6A01G111000 chr3A 94.828 58 3 0 1313 1370 256533112 256533055 2.100000e-14 91.6
74 TraesCS6A01G111000 chr3A 93.443 61 4 0 1307 1367 454167382 454167442 2.100000e-14 91.6
75 TraesCS6A01G111000 chr3A 79.646 113 17 6 1630 1737 710278007 710277896 5.870000e-10 76.8
76 TraesCS6A01G111000 chr1A 93.621 580 35 2 1 578 376743780 376743201 0.000000e+00 865.0
77 TraesCS6A01G111000 chr1A 93.460 581 33 5 1 579 14792912 14792335 0.000000e+00 857.0
78 TraesCS6A01G111000 chr1A 90.278 72 4 3 1313 1382 586338247 586338177 2.100000e-14 91.6
79 TraesCS6A01G111000 chr1A 83.750 80 9 3 2574 2650 577982620 577982542 7.600000e-09 73.1
80 TraesCS6A01G111000 chr1A 86.792 53 3 3 2576 2628 5548207 5548255 7.650000e-04 56.5
81 TraesCS6A01G111000 chr5D 92.369 249 19 0 5220 5468 527698346 527698098 6.740000e-94 355.0
82 TraesCS6A01G111000 chr5D 84.112 107 16 1 2546 2652 80444376 80444481 9.690000e-18 102.0
83 TraesCS6A01G111000 chr5D 93.750 64 3 1 1309 1372 423868371 423868309 1.620000e-15 95.3
84 TraesCS6A01G111000 chr5D 89.552 67 5 2 1673 1737 481806112 481806178 3.510000e-12 84.2
85 TraesCS6A01G111000 chr5D 88.333 60 7 0 2574 2633 441124096 441124037 7.600000e-09 73.1
86 TraesCS6A01G111000 chr2D 93.277 238 16 0 5220 5457 596771343 596771106 8.710000e-93 351.0
87 TraesCS6A01G111000 chr2D 91.633 251 21 0 5218 5468 330886029 330886279 1.130000e-91 348.0
88 TraesCS6A01G111000 chr2D 81.383 188 32 3 2463 2649 337847190 337847375 3.410000e-32 150.0
89 TraesCS6A01G111000 chr2D 93.333 60 4 0 1313 1372 198464283 198464342 7.540000e-14 89.8
90 TraesCS6A01G111000 chr4A 91.373 255 21 1 5215 5468 502533979 502533725 1.130000e-91 348.0
91 TraesCS6A01G111000 chr4A 86.842 76 8 2 1664 1737 684976198 684976123 3.510000e-12 84.2
92 TraesCS6A01G111000 chr4A 85.897 78 9 2 1662 1737 616959244 616959167 1.260000e-11 82.4
93 TraesCS6A01G111000 chr5B 91.633 251 20 1 5218 5468 216763588 216763339 4.050000e-91 346.0
94 TraesCS6A01G111000 chr3D 91.667 252 18 2 5218 5468 371457387 371457138 4.050000e-91 346.0
95 TraesCS6A01G111000 chr3D 91.379 58 3 2 1666 1722 269117763 269117819 1.630000e-10 78.7
96 TraesCS6A01G111000 chr3D 83.529 85 9 4 1669 1751 497364449 497364530 2.110000e-09 75.0
97 TraesCS6A01G111000 chr1D 91.633 251 20 1 5218 5468 347513581 347513830 4.050000e-91 346.0
98 TraesCS6A01G111000 chr1D 83.951 81 11 2 1659 1737 111518772 111518852 5.870000e-10 76.8
99 TraesCS6A01G111000 chr1D 85.526 76 7 4 1665 1737 239333485 239333411 5.870000e-10 76.8
100 TraesCS6A01G111000 chr1D 83.544 79 11 1 2574 2650 9219488 9219410 7.600000e-09 73.1
101 TraesCS6A01G111000 chr1D 84.211 76 8 3 1666 1737 351546592 351546517 2.730000e-08 71.3
102 TraesCS6A01G111000 chr1D 79.048 105 19 3 1684 1786 76975436 76975333 9.830000e-08 69.4
103 TraesCS6A01G111000 chr1D 91.304 46 4 0 2588 2633 30687787 30687832 4.570000e-06 63.9
104 TraesCS6A01G111000 chr1D 100.000 30 0 0 2218 2247 15001973 15002002 7.650000e-04 56.5
105 TraesCS6A01G111000 chr2B 74.795 365 65 17 2291 2653 342301367 342301028 7.390000e-29 139.0
106 TraesCS6A01G111000 chr2B 85.149 101 13 2 2550 2649 405117200 405117299 9.690000e-18 102.0
107 TraesCS6A01G111000 chr3B 73.529 306 75 6 2303 2605 823556308 823556610 1.610000e-20 111.0
108 TraesCS6A01G111000 chr3B 93.443 61 2 2 1313 1373 800141125 800141183 7.540000e-14 89.8
109 TraesCS6A01G111000 chr4B 94.828 58 3 0 1313 1370 629885309 629885252 2.100000e-14 91.6
110 TraesCS6A01G111000 chr4B 92.188 64 3 1 1313 1374 103322912 103322849 7.540000e-14 89.8
111 TraesCS6A01G111000 chr4D 86.076 79 8 3 1661 1737 16652522 16652445 1.260000e-11 82.4
112 TraesCS6A01G111000 chr4D 86.667 75 8 2 1665 1737 423945312 423945386 1.260000e-11 82.4
113 TraesCS6A01G111000 chr4D 86.301 73 8 2 1667 1737 324227761 324227833 1.630000e-10 78.7
114 TraesCS6A01G111000 chr4D 85.714 77 8 3 1666 1739 420142644 420142720 1.630000e-10 78.7
115 TraesCS6A01G111000 chr5A 86.957 69 9 0 2565 2633 670021379 670021447 1.630000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G111000 chr6A 80513254 80518721 5467 True 3412.266667 10098 95.652000 1 5468 3 chr6A.!!$R3 5467
1 TraesCS6A01G111000 chr6A 169949873 169950452 579 True 870.000000 870 93.793000 1 578 1 chr6A.!!$R1 577
2 TraesCS6A01G111000 chr6B 136448651 136454396 5745 True 1365.900000 4305 91.066250 749 5219 4 chr6B.!!$R1 4470
3 TraesCS6A01G111000 chr7D 101486658 101487237 579 True 870.000000 870 93.793000 1 578 1 chr7D.!!$R1 577
4 TraesCS6A01G111000 chr7D 446429013 446432623 3610 True 812.820000 2652 88.721800 692 4858 5 chr7D.!!$R6 4166
5 TraesCS6A01G111000 chr7D 446349348 446354382 5034 True 513.333333 905 84.139333 1021 4510 3 chr7D.!!$R5 3489
6 TraesCS6A01G111000 chr7A 497276348 497280223 3875 True 871.000000 2398 86.843000 692 4858 4 chr7A.!!$R1 4166
7 TraesCS6A01G111000 chr7B 463033660 463038177 4517 True 880.500000 2298 88.031750 692 4858 4 chr7B.!!$R5 4166
8 TraesCS6A01G111000 chr7B 462862549 462864563 2014 True 584.000000 837 81.357000 2753 4510 2 chr7B.!!$R3 1757
9 TraesCS6A01G111000 chr6D 62818430 62820386 1956 True 935.000000 1325 87.315000 849 2789 2 chr6D.!!$R3 1940
10 TraesCS6A01G111000 chr2A 758540564 758541137 573 False 887.000000 887 94.609000 1 572 1 chr2A.!!$F1 571
11 TraesCS6A01G111000 chr1B 491719543 491720115 572 False 880.000000 880 94.425000 1 572 1 chr1B.!!$F4 571
12 TraesCS6A01G111000 chr1B 12741580 12742153 573 False 870.000000 870 94.077000 1 572 1 chr1B.!!$F1 571
13 TraesCS6A01G111000 chrUn 304340645 304341218 573 False 870.000000 870 94.077000 1 572 1 chrUn.!!$F6 571
14 TraesCS6A01G111000 chr3A 459061624 459062203 579 True 870.000000 870 93.793000 1 578 1 chr3A.!!$R2 577
15 TraesCS6A01G111000 chr1A 376743201 376743780 579 True 865.000000 865 93.621000 1 578 1 chr1A.!!$R2 577
16 TraesCS6A01G111000 chr1A 14792335 14792912 577 True 857.000000 857 93.460000 1 579 1 chr1A.!!$R1 578

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
630 633 0.035820 GCCCACCTACGTGATCCAAA 60.036 55.0 0.0 0.0 43.14 3.28 F
675 678 0.107214 TGTATTGGCAGGTAGGCTGC 60.107 55.0 0.0 0.0 46.20 5.25 F
2537 6743 0.039618 ATCCACCGCCACCATCTTTT 59.960 50.0 0.0 0.0 0.00 2.27 F
2543 6749 0.110238 CGCCACCATCTTTTGTCGTG 60.110 55.0 0.0 0.0 0.00 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2537 6743 0.249868 CTCCTGAAGTTGCCACGACA 60.250 55.0 0.0 0.0 0.00 4.35 R
2633 6839 0.521242 GACGCGTGTTGATGAATGCC 60.521 55.0 20.7 0.0 0.00 4.40 R
4395 9334 0.546598 AGGCCTTTTCGGTAGGATGG 59.453 55.0 0.0 0.0 34.56 3.51 R
4528 9468 2.841442 AGTGCCAGTGAGTACTTTCC 57.159 50.0 0.0 0.0 34.07 3.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
187 188 4.250305 AACAACAGCGAGGGCCGT 62.250 61.111 0.00 0.00 41.24 5.68
278 279 2.431430 CGCTCGAGTGAAGCAGCA 60.431 61.111 21.40 0.00 0.00 4.41
406 408 1.269309 CCGAAATTTGGCCGTGTTTGA 60.269 47.619 0.00 0.00 0.00 2.69
450 452 0.768622 ATTTGGACGAACTGTGGGGA 59.231 50.000 0.00 0.00 0.00 4.81
580 583 0.250252 GGCTGAGATGCCCTTAGAGC 60.250 60.000 0.00 0.00 46.82 4.09
581 584 0.250252 GCTGAGATGCCCTTAGAGCC 60.250 60.000 0.17 0.00 30.62 4.70
582 585 1.422531 CTGAGATGCCCTTAGAGCCT 58.577 55.000 0.00 0.00 30.62 4.58
583 586 1.070445 CTGAGATGCCCTTAGAGCCTG 59.930 57.143 0.00 0.00 30.62 4.85
584 587 0.250252 GAGATGCCCTTAGAGCCTGC 60.250 60.000 0.00 0.00 0.00 4.85
585 588 1.596477 GATGCCCTTAGAGCCTGCG 60.596 63.158 0.00 0.00 0.00 5.18
586 589 2.317149 GATGCCCTTAGAGCCTGCGT 62.317 60.000 0.00 0.00 0.00 5.24
587 590 1.915078 ATGCCCTTAGAGCCTGCGTT 61.915 55.000 0.00 0.00 0.00 4.84
588 591 2.109126 GCCCTTAGAGCCTGCGTTG 61.109 63.158 0.00 0.00 0.00 4.10
589 592 1.450312 CCCTTAGAGCCTGCGTTGG 60.450 63.158 0.00 0.00 0.00 3.77
590 593 1.596934 CCTTAGAGCCTGCGTTGGA 59.403 57.895 0.05 0.00 0.00 3.53
591 594 0.036388 CCTTAGAGCCTGCGTTGGAA 60.036 55.000 0.05 0.00 0.00 3.53
592 595 1.407437 CCTTAGAGCCTGCGTTGGAAT 60.407 52.381 0.05 0.00 0.00 3.01
593 596 2.359900 CTTAGAGCCTGCGTTGGAATT 58.640 47.619 0.05 0.00 0.00 2.17
594 597 1.737838 TAGAGCCTGCGTTGGAATTG 58.262 50.000 0.05 0.00 0.00 2.32
595 598 1.153958 GAGCCTGCGTTGGAATTGC 60.154 57.895 0.05 0.00 0.00 3.56
596 599 2.125952 GCCTGCGTTGGAATTGCC 60.126 61.111 0.00 0.00 37.10 4.52
597 600 2.573340 CCTGCGTTGGAATTGCCC 59.427 61.111 0.00 0.00 34.97 5.36
598 601 1.978617 CCTGCGTTGGAATTGCCCT 60.979 57.895 0.00 0.00 34.97 5.19
599 602 1.535204 CCTGCGTTGGAATTGCCCTT 61.535 55.000 0.00 0.00 34.97 3.95
600 603 1.173043 CTGCGTTGGAATTGCCCTTA 58.827 50.000 0.00 0.00 34.97 2.69
601 604 0.885196 TGCGTTGGAATTGCCCTTAC 59.115 50.000 0.00 0.00 34.97 2.34
602 605 0.172578 GCGTTGGAATTGCCCTTACC 59.827 55.000 0.00 0.00 34.97 2.85
603 606 0.815095 CGTTGGAATTGCCCTTACCC 59.185 55.000 0.00 0.00 34.97 3.69
604 607 1.615919 CGTTGGAATTGCCCTTACCCT 60.616 52.381 0.00 0.00 34.97 4.34
605 608 2.536066 GTTGGAATTGCCCTTACCCTT 58.464 47.619 0.00 0.00 34.97 3.95
606 609 3.703921 GTTGGAATTGCCCTTACCCTTA 58.296 45.455 0.00 0.00 34.97 2.69
607 610 4.090819 GTTGGAATTGCCCTTACCCTTAA 58.909 43.478 0.00 0.00 34.97 1.85
608 611 4.405756 TGGAATTGCCCTTACCCTTAAA 57.594 40.909 0.00 0.00 34.97 1.52
609 612 4.090819 TGGAATTGCCCTTACCCTTAAAC 58.909 43.478 0.00 0.00 34.97 2.01
610 613 3.449737 GGAATTGCCCTTACCCTTAAACC 59.550 47.826 0.00 0.00 0.00 3.27
611 614 2.203470 TTGCCCTTACCCTTAAACCG 57.797 50.000 0.00 0.00 0.00 4.44
612 615 0.322726 TGCCCTTACCCTTAAACCGC 60.323 55.000 0.00 0.00 0.00 5.68
613 616 1.033746 GCCCTTACCCTTAAACCGCC 61.034 60.000 0.00 0.00 0.00 6.13
614 617 0.394762 CCCTTACCCTTAAACCGCCC 60.395 60.000 0.00 0.00 0.00 6.13
615 618 0.328926 CCTTACCCTTAAACCGCCCA 59.671 55.000 0.00 0.00 0.00 5.36
616 619 1.456296 CTTACCCTTAAACCGCCCAC 58.544 55.000 0.00 0.00 0.00 4.61
617 620 0.038021 TTACCCTTAAACCGCCCACC 59.962 55.000 0.00 0.00 0.00 4.61
618 621 0.841594 TACCCTTAAACCGCCCACCT 60.842 55.000 0.00 0.00 0.00 4.00
619 622 0.841594 ACCCTTAAACCGCCCACCTA 60.842 55.000 0.00 0.00 0.00 3.08
620 623 0.393402 CCCTTAAACCGCCCACCTAC 60.393 60.000 0.00 0.00 0.00 3.18
621 624 0.741927 CCTTAAACCGCCCACCTACG 60.742 60.000 0.00 0.00 0.00 3.51
622 625 0.037046 CTTAAACCGCCCACCTACGT 60.037 55.000 0.00 0.00 0.00 3.57
623 626 0.320596 TTAAACCGCCCACCTACGTG 60.321 55.000 0.00 0.00 39.91 4.49
624 627 1.184322 TAAACCGCCCACCTACGTGA 61.184 55.000 0.00 0.00 43.14 4.35
625 628 1.833787 AAACCGCCCACCTACGTGAT 61.834 55.000 0.00 0.00 43.14 3.06
626 629 2.106332 CCGCCCACCTACGTGATC 59.894 66.667 0.00 0.00 43.14 2.92
627 630 2.106332 CGCCCACCTACGTGATCC 59.894 66.667 0.00 0.00 43.14 3.36
628 631 2.717044 CGCCCACCTACGTGATCCA 61.717 63.158 0.00 0.00 43.14 3.41
629 632 1.600107 GCCCACCTACGTGATCCAA 59.400 57.895 0.00 0.00 43.14 3.53
630 633 0.035820 GCCCACCTACGTGATCCAAA 60.036 55.000 0.00 0.00 43.14 3.28
631 634 1.734163 CCCACCTACGTGATCCAAAC 58.266 55.000 0.00 0.00 43.14 2.93
632 635 1.355971 CCACCTACGTGATCCAAACG 58.644 55.000 0.00 2.79 43.14 3.60
639 642 2.017357 CGTGATCCAAACGTGTTGTG 57.983 50.000 0.00 0.00 36.31 3.33
640 643 1.329292 CGTGATCCAAACGTGTTGTGT 59.671 47.619 0.00 0.00 36.31 3.72
641 644 2.598907 CGTGATCCAAACGTGTTGTGTC 60.599 50.000 0.00 0.00 36.31 3.67
642 645 2.353269 GTGATCCAAACGTGTTGTGTCA 59.647 45.455 0.00 0.63 0.00 3.58
643 646 3.003275 GTGATCCAAACGTGTTGTGTCAT 59.997 43.478 0.00 0.00 0.00 3.06
644 647 3.629855 TGATCCAAACGTGTTGTGTCATT 59.370 39.130 0.00 0.00 0.00 2.57
645 648 3.684103 TCCAAACGTGTTGTGTCATTC 57.316 42.857 0.00 0.00 0.00 2.67
646 649 3.010420 TCCAAACGTGTTGTGTCATTCA 58.990 40.909 0.00 0.00 0.00 2.57
647 650 3.629855 TCCAAACGTGTTGTGTCATTCAT 59.370 39.130 0.00 0.00 0.00 2.57
648 651 3.974401 CCAAACGTGTTGTGTCATTCATC 59.026 43.478 0.00 0.00 0.00 2.92
649 652 4.497173 CCAAACGTGTTGTGTCATTCATCA 60.497 41.667 0.00 0.00 0.00 3.07
650 653 3.878086 ACGTGTTGTGTCATTCATCAC 57.122 42.857 0.00 0.00 35.43 3.06
651 654 3.202097 ACGTGTTGTGTCATTCATCACA 58.798 40.909 0.00 0.00 41.81 3.58
652 655 3.248363 ACGTGTTGTGTCATTCATCACAG 59.752 43.478 0.00 0.00 43.75 3.66
653 656 3.494251 CGTGTTGTGTCATTCATCACAGA 59.506 43.478 0.00 0.00 43.75 3.41
654 657 4.609113 CGTGTTGTGTCATTCATCACAGAC 60.609 45.833 0.00 0.00 43.75 3.51
655 658 3.814842 TGTTGTGTCATTCATCACAGACC 59.185 43.478 0.00 0.00 43.75 3.85
656 659 4.067896 GTTGTGTCATTCATCACAGACCT 58.932 43.478 0.00 0.00 43.75 3.85
657 660 3.667360 TGTGTCATTCATCACAGACCTG 58.333 45.455 0.00 0.00 39.23 4.00
658 661 3.071457 TGTGTCATTCATCACAGACCTGT 59.929 43.478 0.00 0.00 46.17 4.00
659 662 4.283212 TGTGTCATTCATCACAGACCTGTA 59.717 41.667 1.95 0.00 42.83 2.74
660 663 5.046376 TGTGTCATTCATCACAGACCTGTAT 60.046 40.000 1.95 0.00 42.83 2.29
661 664 5.877012 GTGTCATTCATCACAGACCTGTATT 59.123 40.000 1.95 0.00 42.83 1.89
662 665 5.876460 TGTCATTCATCACAGACCTGTATTG 59.124 40.000 1.95 4.17 42.83 1.90
663 666 5.295292 GTCATTCATCACAGACCTGTATTGG 59.705 44.000 1.95 0.00 42.83 3.16
664 667 3.266510 TCATCACAGACCTGTATTGGC 57.733 47.619 1.95 0.00 42.83 4.52
665 668 2.571202 TCATCACAGACCTGTATTGGCA 59.429 45.455 1.95 0.00 42.83 4.92
666 669 2.768253 TCACAGACCTGTATTGGCAG 57.232 50.000 1.95 0.00 42.83 4.85
674 677 1.959042 CTGTATTGGCAGGTAGGCTG 58.041 55.000 0.00 0.00 44.55 4.85
675 678 0.107214 TGTATTGGCAGGTAGGCTGC 60.107 55.000 0.00 0.00 46.20 5.25
681 684 3.569873 GCAGGTAGGCTGCCTAAAA 57.430 52.632 28.89 7.86 37.91 1.52
682 685 1.095600 GCAGGTAGGCTGCCTAAAAC 58.904 55.000 28.89 19.50 37.91 2.43
683 686 1.613255 GCAGGTAGGCTGCCTAAAACA 60.613 52.381 28.89 7.02 37.91 2.83
684 687 2.084546 CAGGTAGGCTGCCTAAAACAC 58.915 52.381 28.89 18.77 37.91 3.32
685 688 1.084289 GGTAGGCTGCCTAAAACACG 58.916 55.000 28.89 0.00 37.91 4.49
686 689 1.084289 GTAGGCTGCCTAAAACACGG 58.916 55.000 28.89 0.00 37.91 4.94
687 690 0.978151 TAGGCTGCCTAAAACACGGA 59.022 50.000 25.54 1.54 32.55 4.69
688 691 0.605589 AGGCTGCCTAAAACACGGAC 60.606 55.000 21.98 0.00 28.47 4.79
689 692 1.495951 GCTGCCTAAAACACGGACG 59.504 57.895 0.00 0.00 0.00 4.79
690 693 0.947180 GCTGCCTAAAACACGGACGA 60.947 55.000 0.00 0.00 0.00 4.20
705 708 0.530650 GACGACCGTGGCATGATCAT 60.531 55.000 8.63 1.18 0.00 2.45
740 743 4.202631 ACTTGGGCCTCCTACAATTTTACA 60.203 41.667 4.53 0.00 0.00 2.41
744 747 3.442625 GGCCTCCTACAATTTTACACCAC 59.557 47.826 0.00 0.00 0.00 4.16
747 750 4.700213 CCTCCTACAATTTTACACCACCAG 59.300 45.833 0.00 0.00 0.00 4.00
756 759 4.601794 CACCACCAGGCTGCCCAA 62.602 66.667 16.57 0.00 39.06 4.12
759 764 1.454479 CCACCAGGCTGCCCAATAG 60.454 63.158 16.57 2.16 0.00 1.73
770 775 2.301296 CTGCCCAATAGATCGACAGGAT 59.699 50.000 0.00 0.00 38.35 3.24
827 834 5.655090 ACCAACCATATATGCATGATGATGG 59.345 40.000 25.98 25.98 39.80 3.51
931 943 3.214190 TTGCACCAGCCAGAGCCAT 62.214 57.895 0.00 0.00 41.25 4.40
940 966 1.293179 CCAGAGCCATCGACACACA 59.707 57.895 0.00 0.00 0.00 3.72
941 967 1.016130 CCAGAGCCATCGACACACAC 61.016 60.000 0.00 0.00 0.00 3.82
942 968 0.319813 CAGAGCCATCGACACACACA 60.320 55.000 0.00 0.00 0.00 3.72
943 969 0.319900 AGAGCCATCGACACACACAC 60.320 55.000 0.00 0.00 0.00 3.82
944 970 0.599991 GAGCCATCGACACACACACA 60.600 55.000 0.00 0.00 0.00 3.72
945 971 0.880278 AGCCATCGACACACACACAC 60.880 55.000 0.00 0.00 0.00 3.82
958 984 0.736325 CACACACTACACCGCTAGCC 60.736 60.000 9.66 0.00 0.00 3.93
979 1017 5.104941 AGCCAGCTGATAGTACATACAACAA 60.105 40.000 17.39 0.00 0.00 2.83
986 1024 9.130312 GCTGATAGTACATACAACAATAGTAGC 57.870 37.037 0.00 0.00 0.00 3.58
1098 1136 1.922135 GAAGCAAAATCTCCGCCGCA 61.922 55.000 0.00 0.00 0.00 5.69
1283 1845 4.340381 ACATAGTAAGTAGTAGCAACCGGG 59.660 45.833 6.32 0.00 0.00 5.73
1285 1847 3.022406 AGTAAGTAGTAGCAACCGGGAG 58.978 50.000 6.32 0.00 0.00 4.30
1291 1853 1.911269 TAGCAACCGGGAGCTGACA 60.911 57.895 27.06 9.64 41.97 3.58
1402 3027 6.844254 ACTTTGTTGTTTACGCTACTTTTGA 58.156 32.000 0.00 0.00 0.00 2.69
1418 3124 3.507103 TTTGATGTGTATGGCATGCAC 57.493 42.857 33.13 33.13 44.71 4.57
1420 3126 0.308684 GATGTGTATGGCATGCACCG 59.691 55.000 35.17 0.00 43.98 4.94
1421 3127 1.102809 ATGTGTATGGCATGCACCGG 61.103 55.000 35.17 0.00 43.98 5.28
1426 3132 2.104963 TGTATGGCATGCACCGGTTATA 59.895 45.455 21.36 0.00 0.00 0.98
1428 3134 1.890876 TGGCATGCACCGGTTATATC 58.109 50.000 21.36 0.00 0.00 1.63
1490 3202 8.804688 TTATATGCAACTTTGGTTACAACAAC 57.195 30.769 0.00 0.00 36.06 3.32
1498 3210 7.164230 ACTTTGGTTACAACAACATGAGAAA 57.836 32.000 0.00 0.00 36.06 2.52
1499 3211 7.781056 ACTTTGGTTACAACAACATGAGAAAT 58.219 30.769 0.00 0.00 36.06 2.17
1500 3212 8.908903 ACTTTGGTTACAACAACATGAGAAATA 58.091 29.630 0.00 0.00 36.06 1.40
1501 3213 9.180678 CTTTGGTTACAACAACATGAGAAATAC 57.819 33.333 0.00 0.00 36.06 1.89
1540 3254 1.084289 GGCTAACTTTACCGCACCTG 58.916 55.000 0.00 0.00 0.00 4.00
1657 3388 4.698304 TCCCACGTCTCAAAATAAATGTCC 59.302 41.667 0.00 0.00 0.00 4.02
1668 3399 9.191995 CTCAAAATAAATGTCCCAACTTTGTAC 57.808 33.333 0.00 0.00 0.00 2.90
1669 3400 8.145122 TCAAAATAAATGTCCCAACTTTGTACC 58.855 33.333 0.00 0.00 0.00 3.34
1670 3401 6.599356 AATAAATGTCCCAACTTTGTACCC 57.401 37.500 0.00 0.00 0.00 3.69
1671 3402 3.895704 AATGTCCCAACTTTGTACCCT 57.104 42.857 0.00 0.00 0.00 4.34
1681 3440 5.008316 CCAACTTTGTACCCTCTGTGTAAAC 59.992 44.000 0.00 0.00 0.00 2.01
1711 3470 8.859517 ATAAGAGCGTTTAGATCACTACTTTC 57.140 34.615 0.00 0.00 37.82 2.62
1712 3471 6.268825 AGAGCGTTTAGATCACTACTTTCA 57.731 37.500 0.00 0.00 37.82 2.69
1928 4022 3.244078 TGAAGTCTTCGCACCACTATTGT 60.244 43.478 8.06 0.00 0.00 2.71
1966 4386 3.019564 GAGACATTTTGGGGTCCAGATG 58.980 50.000 9.38 9.38 36.02 2.90
2039 4516 3.605749 TACTGGCCCGTCAGCTTGC 62.606 63.158 1.80 0.00 38.26 4.01
2084 6000 5.920193 TTTTCTGCCTCCTCCATTTAATG 57.080 39.130 0.00 0.00 0.00 1.90
2085 6001 2.936202 TCTGCCTCCTCCATTTAATGC 58.064 47.619 0.00 0.00 0.00 3.56
2086 6002 2.241941 TCTGCCTCCTCCATTTAATGCA 59.758 45.455 0.00 0.00 0.00 3.96
2087 6003 2.360165 CTGCCTCCTCCATTTAATGCAC 59.640 50.000 0.00 0.00 0.00 4.57
2088 6004 2.291475 TGCCTCCTCCATTTAATGCACA 60.291 45.455 0.00 0.00 0.00 4.57
2089 6005 2.760092 GCCTCCTCCATTTAATGCACAA 59.240 45.455 0.00 0.00 0.00 3.33
2205 6392 2.816672 TGCATGTCGAGCAATAACCAAA 59.183 40.909 0.00 0.00 39.39 3.28
2398 6601 6.348213 GCTACCGTTACAAGTTTGATGATGTT 60.348 38.462 0.00 0.00 0.00 2.71
2400 6603 5.763204 ACCGTTACAAGTTTGATGATGTTCT 59.237 36.000 0.00 0.00 0.00 3.01
2401 6604 6.079763 CCGTTACAAGTTTGATGATGTTCTG 58.920 40.000 0.00 0.00 0.00 3.02
2402 6605 6.079763 CGTTACAAGTTTGATGATGTTCTGG 58.920 40.000 0.00 0.00 0.00 3.86
2403 6606 6.293407 CGTTACAAGTTTGATGATGTTCTGGT 60.293 38.462 0.00 0.00 0.00 4.00
2405 6608 8.730680 GTTACAAGTTTGATGATGTTCTGGTAT 58.269 33.333 0.00 0.00 0.00 2.73
2406 6609 7.383102 ACAAGTTTGATGATGTTCTGGTATC 57.617 36.000 0.00 0.00 0.00 2.24
2407 6610 6.942005 ACAAGTTTGATGATGTTCTGGTATCA 59.058 34.615 0.00 0.00 37.68 2.15
2410 6615 6.942005 AGTTTGATGATGTTCTGGTATCACAA 59.058 34.615 0.00 0.00 36.26 3.33
2428 6633 7.828508 ATCACAACATGCATACCATCTAATT 57.171 32.000 0.00 0.00 29.71 1.40
2435 6640 2.870435 GCATACCATCTAATTCGGCGGT 60.870 50.000 7.21 0.00 0.00 5.68
2439 6644 2.631062 ACCATCTAATTCGGCGGTATCA 59.369 45.455 7.21 0.00 0.00 2.15
2447 6652 2.895372 GGCGGTATCACCAAGCCG 60.895 66.667 0.00 0.00 46.17 5.52
2474 6680 0.819259 GTGAGCAAGAGCACCAACCA 60.819 55.000 0.00 0.00 45.49 3.67
2480 6686 2.421424 GCAAGAGCACCAACCAATCTAG 59.579 50.000 0.00 0.00 41.58 2.43
2503 6709 0.833287 ACCCTTAGCGAGCATCACAT 59.167 50.000 0.00 0.00 33.17 3.21
2505 6711 1.473965 CCCTTAGCGAGCATCACATGT 60.474 52.381 0.00 0.00 33.17 3.21
2509 6715 0.956902 AGCGAGCATCACATGTGCAA 60.957 50.000 21.38 5.24 44.87 4.08
2537 6743 0.039618 ATCCACCGCCACCATCTTTT 59.960 50.000 0.00 0.00 0.00 2.27
2543 6749 0.110238 CGCCACCATCTTTTGTCGTG 60.110 55.000 0.00 0.00 0.00 4.35
2544 6750 0.240945 GCCACCATCTTTTGTCGTGG 59.759 55.000 0.00 0.00 45.55 4.94
2558 6764 0.318441 TCGTGGCAACTTCAGGAGAG 59.682 55.000 0.00 0.00 37.61 3.20
2562 6768 2.027745 GTGGCAACTTCAGGAGAGATCA 60.028 50.000 0.00 0.00 37.61 2.92
2564 6770 3.265221 TGGCAACTTCAGGAGAGATCAAT 59.735 43.478 0.00 0.00 37.61 2.57
2617 6823 1.511305 CCACCACGACGCTAGACAT 59.489 57.895 0.00 0.00 0.00 3.06
2620 6826 1.103803 ACCACGACGCTAGACATCAT 58.896 50.000 0.00 0.00 0.00 2.45
2633 6839 0.179037 ACATCATCACCATCCTGCGG 60.179 55.000 0.00 0.00 0.00 5.69
2636 6842 3.410628 ATCACCATCCTGCGGGCA 61.411 61.111 6.73 0.00 0.00 5.36
2638 6844 2.288642 ATCACCATCCTGCGGGCATT 62.289 55.000 6.73 0.00 0.00 3.56
2750 6987 6.879458 ACTCTTTAATGGCTAGTTTACACCAG 59.121 38.462 0.00 0.00 35.20 4.00
2773 7017 6.207417 CAGGTGAAAACTTGAATATCCACTGT 59.793 38.462 0.00 0.00 0.00 3.55
2794 7038 6.096705 ACTGTTGGTGACATTTTTCTTGATCA 59.903 34.615 0.00 0.00 42.32 2.92
2828 7072 6.841781 AGGCTGGGAATTAAGGAACTATTA 57.158 37.500 0.00 0.00 38.49 0.98
2961 7205 6.954487 AATATGTCACATGCATCTCACAAT 57.046 33.333 0.00 0.00 0.00 2.71
2987 7236 6.880942 AGTTCTCGTCAAGTATATACCCTC 57.119 41.667 9.32 0.00 0.00 4.30
2988 7237 5.469421 AGTTCTCGTCAAGTATATACCCTCG 59.531 44.000 9.32 9.43 0.00 4.63
2989 7238 4.321718 TCTCGTCAAGTATATACCCTCGG 58.678 47.826 9.32 0.00 0.00 4.63
2990 7239 4.070716 CTCGTCAAGTATATACCCTCGGT 58.929 47.826 9.32 0.00 40.16 4.69
2991 7240 5.012046 TCTCGTCAAGTATATACCCTCGGTA 59.988 44.000 9.32 0.00 42.80 4.02
2992 7241 5.620206 TCGTCAAGTATATACCCTCGGTAA 58.380 41.667 9.32 0.00 41.85 2.85
2993 7242 5.470098 TCGTCAAGTATATACCCTCGGTAAC 59.530 44.000 9.32 0.00 41.85 2.50
2994 7243 5.239306 CGTCAAGTATATACCCTCGGTAACA 59.761 44.000 9.32 0.00 41.85 2.41
2995 7244 6.238731 CGTCAAGTATATACCCTCGGTAACAA 60.239 42.308 9.32 0.00 41.85 2.83
2997 7246 7.981225 GTCAAGTATATACCCTCGGTAACAAAA 59.019 37.037 9.32 0.00 41.85 2.44
2998 7247 8.707449 TCAAGTATATACCCTCGGTAACAAAAT 58.293 33.333 9.32 0.00 41.85 1.82
3002 7251 9.933723 GTATATACCCTCGGTAACAAAATATGT 57.066 33.333 1.02 0.00 41.85 2.29
3004 7253 5.168647 ACCCTCGGTAACAAAATATGTCA 57.831 39.130 0.00 0.00 42.99 3.58
3005 7254 4.939439 ACCCTCGGTAACAAAATATGTCAC 59.061 41.667 0.00 0.00 42.99 3.67
3007 7256 5.588648 CCCTCGGTAACAAAATATGTCACAT 59.411 40.000 0.00 0.00 42.99 3.21
3009 7258 5.874831 TCGGTAACAAAATATGTCACATGC 58.125 37.500 0.00 0.00 42.99 4.06
3014 7263 7.645340 GGTAACAAAATATGTCACATGCATCTC 59.355 37.037 0.00 0.00 42.99 2.75
3053 7306 6.645790 AATGCTAATTTCCTATGCTTCAGG 57.354 37.500 0.00 0.00 34.20 3.86
3064 7317 0.614812 TGCTTCAGGCTGCTACATCA 59.385 50.000 10.34 0.00 42.39 3.07
3115 7368 5.047943 TGAATATAAGGAGCGACTAAGAGCC 60.048 44.000 0.00 0.00 0.00 4.70
3244 7497 4.723309 GCCATCAATATGACCTTCCTTCT 58.277 43.478 0.00 0.00 34.84 2.85
3247 7500 6.944862 GCCATCAATATGACCTTCCTTCTTAT 59.055 38.462 0.00 0.00 34.84 1.73
3396 7666 9.872757 GTGTTCATTTAGTTCTTCGACATTTTA 57.127 29.630 0.00 0.00 0.00 1.52
3439 7709 4.436523 CGAACTCAAAAACGACAAACCATC 59.563 41.667 0.00 0.00 0.00 3.51
3446 7716 1.064825 ACGACAAACCATCCCTTCCT 58.935 50.000 0.00 0.00 0.00 3.36
3447 7717 2.262637 ACGACAAACCATCCCTTCCTA 58.737 47.619 0.00 0.00 0.00 2.94
3448 7718 2.027469 ACGACAAACCATCCCTTCCTAC 60.027 50.000 0.00 0.00 0.00 3.18
3449 7719 2.236395 CGACAAACCATCCCTTCCTACT 59.764 50.000 0.00 0.00 0.00 2.57
3580 7856 8.884124 AGGGATATTTTATAATGACCATGGTG 57.116 34.615 25.52 0.00 0.00 4.17
3593 7869 2.158682 ACCATGGTGCTTATAATCGCCA 60.159 45.455 18.99 20.61 45.63 5.69
3821 8100 3.442625 TGAGGAATCAAGCAGCAAATCTG 59.557 43.478 0.00 0.00 45.62 2.90
3932 8211 8.114331 ACTACAATTTGCTTGATCTCATTCAA 57.886 30.769 0.00 0.00 38.29 2.69
3936 8215 5.885230 TTTGCTTGATCTCATTCAACGAT 57.115 34.783 0.00 0.00 32.39 3.73
3940 8219 4.807834 GCTTGATCTCATTCAACGATCTGA 59.192 41.667 0.00 0.00 35.68 3.27
3955 8234 7.390440 TCAACGATCTGATTTTTATGGTGAGTT 59.610 33.333 0.00 0.00 0.00 3.01
4007 8287 6.709397 AGAGCATACCATCAATCATTACTGTG 59.291 38.462 0.00 0.00 0.00 3.66
4015 8295 8.884323 ACCATCAATCATTACTGTGGAGTATAT 58.116 33.333 0.00 0.00 34.53 0.86
4092 9031 7.047891 GTCATCAATCTTACAATACCACAGGA 58.952 38.462 0.00 0.00 0.00 3.86
4106 9045 5.784578 ACCACAGGAAAATTGAAGTAACC 57.215 39.130 0.00 0.00 0.00 2.85
4134 9073 6.453092 ACTGTGTAGTGAACTAACATGGTAC 58.547 40.000 0.00 0.00 35.34 3.34
4318 9257 2.949177 AGGATGTTGTGGTAGCACAA 57.051 45.000 31.08 31.08 42.10 3.33
4395 9334 6.350780 ATGATTTCATTTTCTGGGACAGCTTC 60.351 38.462 0.00 0.00 45.28 3.86
4485 9425 7.670364 TGATGTGAAGAAACTCACTCTCAATA 58.330 34.615 5.43 0.00 45.03 1.90
4487 9427 6.459066 TGTGAAGAAACTCACTCTCAATAGG 58.541 40.000 5.43 0.00 45.03 2.57
4583 9523 5.498393 TGGCCATTCATGCAAATTTGTATT 58.502 33.333 17.83 2.90 30.88 1.89
4605 9545 3.067833 GCTAGTGAAAGTTCGCTCCTTT 58.932 45.455 10.27 0.00 44.13 3.11
4620 9560 4.217550 CGCTCCTTTCAAAATGGGTAAAGA 59.782 41.667 0.00 0.00 31.96 2.52
4631 9571 2.376109 TGGGTAAAGACTAGAGGCTCG 58.624 52.381 9.22 0.00 0.00 5.03
4643 9583 6.205853 AGACTAGAGGCTCGTGAAATACATAG 59.794 42.308 9.22 3.89 0.00 2.23
4650 9590 6.483640 AGGCTCGTGAAATACATAGGAAATTC 59.516 38.462 0.00 0.00 0.00 2.17
4660 9600 7.931578 ATACATAGGAAATTCGTTTTGGTCA 57.068 32.000 0.00 0.00 0.00 4.02
4748 9688 9.453325 CTCAATTTTTGGTGGATTTCAAATTTG 57.547 29.630 12.15 12.15 33.58 2.32
4753 9693 6.674694 TTGGTGGATTTCAAATTTGTTGTG 57.325 33.333 17.47 0.00 0.00 3.33
4771 9711 0.182299 TGCACAGATGTGGTGGTTGA 59.818 50.000 14.44 0.00 45.72 3.18
4818 9758 6.763135 GTCCATTAGCATGTGTTGATCTTCTA 59.237 38.462 0.00 0.00 0.00 2.10
4830 9770 4.655762 TGATCTTCTAGGGATGAACGTG 57.344 45.455 0.00 0.00 31.06 4.49
4834 9774 0.824109 TCTAGGGATGAACGTGCCTG 59.176 55.000 15.53 7.29 40.48 4.85
4923 9863 7.333528 GTCATGTATTTGGGTTATGACATGT 57.666 36.000 0.00 0.00 44.22 3.21
4932 9872 2.949644 GGTTATGACATGTAAGGTGGCC 59.050 50.000 0.00 0.00 0.00 5.36
4933 9873 3.616219 GTTATGACATGTAAGGTGGCCA 58.384 45.455 0.00 0.00 0.00 5.36
4941 9881 4.263727 ACATGTAAGGTGGCCACTGATTTA 60.264 41.667 33.91 22.37 0.00 1.40
4943 9883 3.329520 TGTAAGGTGGCCACTGATTTAGT 59.670 43.478 33.91 13.23 41.36 2.24
4962 9902 7.678194 TTTAGTGATTTCGTTTTCTTGCTTG 57.322 32.000 0.00 0.00 0.00 4.01
4972 9912 5.043248 CGTTTTCTTGCTTGGTGATTTCTT 58.957 37.500 0.00 0.00 0.00 2.52
5015 9955 1.725164 CGAGAACTTACCGTTTCAGCC 59.275 52.381 0.00 0.00 35.56 4.85
5068 10008 2.514803 AGCGCTTGTTGGTCCTTAAAT 58.485 42.857 2.64 0.00 0.00 1.40
5075 10016 2.378547 TGTTGGTCCTTAAATGAGGCCT 59.621 45.455 3.86 3.86 36.71 5.19
5103 10044 8.008513 AGAGTCTTACAACTAGAGTTCAACAA 57.991 34.615 0.00 0.00 35.83 2.83
5171 10112 3.376859 TGACTGAACAAAGCGACACATTT 59.623 39.130 0.00 0.00 0.00 2.32
5172 10113 3.694734 ACTGAACAAAGCGACACATTTG 58.305 40.909 0.00 0.00 41.22 2.32
5173 10114 2.458951 TGAACAAAGCGACACATTTGC 58.541 42.857 0.00 0.00 39.49 3.68
5195 10136 4.330250 CTTGCAATCCGAGGGATATCAAT 58.670 43.478 0.00 0.00 42.27 2.57
5225 10166 9.289303 CATAAATGAAAAGAAAGGGTTGATACG 57.711 33.333 0.00 0.00 0.00 3.06
5226 10167 6.894339 AATGAAAAGAAAGGGTTGATACGT 57.106 33.333 0.00 0.00 0.00 3.57
5227 10168 5.934935 TGAAAAGAAAGGGTTGATACGTC 57.065 39.130 0.00 0.00 0.00 4.34
5228 10169 4.758165 TGAAAAGAAAGGGTTGATACGTCC 59.242 41.667 0.00 0.00 0.00 4.79
5229 10170 4.360951 AAAGAAAGGGTTGATACGTCCA 57.639 40.909 0.00 0.00 0.00 4.02
5230 10171 4.569719 AAGAAAGGGTTGATACGTCCAT 57.430 40.909 0.00 0.00 0.00 3.41
5231 10172 4.569719 AGAAAGGGTTGATACGTCCATT 57.430 40.909 0.00 0.00 0.00 3.16
5232 10173 4.918588 AGAAAGGGTTGATACGTCCATTT 58.081 39.130 2.90 2.90 37.82 2.32
5233 10174 5.321927 AGAAAGGGTTGATACGTCCATTTT 58.678 37.500 4.63 0.00 35.79 1.82
5234 10175 5.183140 AGAAAGGGTTGATACGTCCATTTTG 59.817 40.000 4.63 0.00 35.79 2.44
5235 10176 2.752903 AGGGTTGATACGTCCATTTTGC 59.247 45.455 0.00 0.00 0.00 3.68
5236 10177 2.490115 GGGTTGATACGTCCATTTTGCA 59.510 45.455 0.00 0.00 0.00 4.08
5237 10178 3.130340 GGGTTGATACGTCCATTTTGCAT 59.870 43.478 0.00 0.00 0.00 3.96
5238 10179 4.351192 GGTTGATACGTCCATTTTGCATC 58.649 43.478 0.00 0.00 0.00 3.91
5239 10180 4.142491 GGTTGATACGTCCATTTTGCATCA 60.142 41.667 0.00 0.00 0.00 3.07
5240 10181 5.450412 GGTTGATACGTCCATTTTGCATCAT 60.450 40.000 0.00 0.00 0.00 2.45
5241 10182 5.172460 TGATACGTCCATTTTGCATCATG 57.828 39.130 0.00 0.00 0.00 3.07
5242 10183 4.639755 TGATACGTCCATTTTGCATCATGT 59.360 37.500 0.00 0.00 0.00 3.21
5243 10184 3.940209 ACGTCCATTTTGCATCATGTT 57.060 38.095 0.00 0.00 0.00 2.71
5244 10185 4.255833 ACGTCCATTTTGCATCATGTTT 57.744 36.364 0.00 0.00 0.00 2.83
5245 10186 4.630111 ACGTCCATTTTGCATCATGTTTT 58.370 34.783 0.00 0.00 0.00 2.43
5246 10187 5.055812 ACGTCCATTTTGCATCATGTTTTT 58.944 33.333 0.00 0.00 0.00 1.94
5304 10245 7.145932 ACACTTTGTGGAGTAATTCTAATGC 57.854 36.000 2.72 0.00 37.94 3.56
5305 10246 6.151144 ACACTTTGTGGAGTAATTCTAATGCC 59.849 38.462 2.72 0.00 37.94 4.40
5306 10247 6.375455 CACTTTGTGGAGTAATTCTAATGCCT 59.625 38.462 0.00 0.00 0.00 4.75
5307 10248 6.948309 ACTTTGTGGAGTAATTCTAATGCCTT 59.052 34.615 0.00 0.00 0.00 4.35
5308 10249 7.451566 ACTTTGTGGAGTAATTCTAATGCCTTT 59.548 33.333 0.00 0.00 0.00 3.11
5309 10250 7.775053 TTGTGGAGTAATTCTAATGCCTTTT 57.225 32.000 0.00 0.00 0.00 2.27
5310 10251 7.391148 TGTGGAGTAATTCTAATGCCTTTTC 57.609 36.000 0.00 0.00 0.00 2.29
5311 10252 7.175104 TGTGGAGTAATTCTAATGCCTTTTCT 58.825 34.615 0.00 0.00 0.00 2.52
5312 10253 7.336931 TGTGGAGTAATTCTAATGCCTTTTCTC 59.663 37.037 0.00 0.00 0.00 2.87
5313 10254 7.554476 GTGGAGTAATTCTAATGCCTTTTCTCT 59.446 37.037 0.00 0.00 0.00 3.10
5314 10255 7.770897 TGGAGTAATTCTAATGCCTTTTCTCTC 59.229 37.037 0.00 0.00 0.00 3.20
5315 10256 7.770897 GGAGTAATTCTAATGCCTTTTCTCTCA 59.229 37.037 0.00 0.00 0.00 3.27
5316 10257 9.336171 GAGTAATTCTAATGCCTTTTCTCTCAT 57.664 33.333 0.00 0.00 0.00 2.90
5327 10268 8.455903 TGCCTTTTCTCTCATAATATGAAAGG 57.544 34.615 19.14 19.14 39.94 3.11
5328 10269 8.055181 TGCCTTTTCTCTCATAATATGAAAGGT 58.945 33.333 22.02 0.00 39.52 3.50
5329 10270 8.907885 GCCTTTTCTCTCATAATATGAAAGGTT 58.092 33.333 22.02 0.00 39.52 3.50
5342 10283 8.934023 AATATGAAAGGTTTACACAAAGAGGA 57.066 30.769 0.00 0.00 0.00 3.71
5343 10284 8.934023 ATATGAAAGGTTTACACAAAGAGGAA 57.066 30.769 0.00 0.00 0.00 3.36
5344 10285 6.693315 TGAAAGGTTTACACAAAGAGGAAG 57.307 37.500 0.00 0.00 0.00 3.46
5345 10286 6.419791 TGAAAGGTTTACACAAAGAGGAAGA 58.580 36.000 0.00 0.00 0.00 2.87
5346 10287 6.887545 TGAAAGGTTTACACAAAGAGGAAGAA 59.112 34.615 0.00 0.00 0.00 2.52
5347 10288 7.559897 TGAAAGGTTTACACAAAGAGGAAGAAT 59.440 33.333 0.00 0.00 0.00 2.40
5348 10289 8.990163 AAAGGTTTACACAAAGAGGAAGAATA 57.010 30.769 0.00 0.00 0.00 1.75
5349 10290 7.981102 AGGTTTACACAAAGAGGAAGAATAC 57.019 36.000 0.00 0.00 0.00 1.89
5350 10291 6.940867 AGGTTTACACAAAGAGGAAGAATACC 59.059 38.462 0.00 0.00 0.00 2.73
5351 10292 6.128363 GGTTTACACAAAGAGGAAGAATACCG 60.128 42.308 0.00 0.00 0.00 4.02
5352 10293 3.939066 ACACAAAGAGGAAGAATACCGG 58.061 45.455 0.00 0.00 0.00 5.28
5353 10294 2.678336 CACAAAGAGGAAGAATACCGGC 59.322 50.000 0.00 0.00 0.00 6.13
5354 10295 2.304761 ACAAAGAGGAAGAATACCGGCA 59.695 45.455 0.00 0.00 0.00 5.69
5355 10296 2.939103 CAAAGAGGAAGAATACCGGCAG 59.061 50.000 0.00 0.00 0.00 4.85
5356 10297 0.466124 AGAGGAAGAATACCGGCAGC 59.534 55.000 0.00 0.00 0.00 5.25
5357 10298 0.466124 GAGGAAGAATACCGGCAGCT 59.534 55.000 0.00 0.00 0.00 4.24
5358 10299 0.179000 AGGAAGAATACCGGCAGCTG 59.821 55.000 10.11 10.11 0.00 4.24
5359 10300 0.815615 GGAAGAATACCGGCAGCTGG 60.816 60.000 19.77 19.77 35.68 4.85
5360 10301 0.178068 GAAGAATACCGGCAGCTGGA 59.822 55.000 28.29 10.99 33.36 3.86
5361 10302 0.618458 AAGAATACCGGCAGCTGGAA 59.382 50.000 28.29 0.00 33.36 3.53
5362 10303 0.839946 AGAATACCGGCAGCTGGAAT 59.160 50.000 28.29 11.93 33.36 3.01
5363 10304 1.212935 AGAATACCGGCAGCTGGAATT 59.787 47.619 28.29 7.22 33.36 2.17
5364 10305 1.604278 GAATACCGGCAGCTGGAATTC 59.396 52.381 28.29 10.69 33.36 2.17
5365 10306 0.839946 ATACCGGCAGCTGGAATTCT 59.160 50.000 28.29 6.40 33.36 2.40
5366 10307 1.491668 TACCGGCAGCTGGAATTCTA 58.508 50.000 28.29 5.28 33.36 2.10
5367 10308 0.179000 ACCGGCAGCTGGAATTCTAG 59.821 55.000 28.29 14.13 33.36 2.43
5368 10309 0.465705 CCGGCAGCTGGAATTCTAGA 59.534 55.000 21.83 0.00 29.82 2.43
5369 10310 1.576356 CGGCAGCTGGAATTCTAGAC 58.424 55.000 21.83 12.81 0.00 2.59
5370 10311 1.808133 CGGCAGCTGGAATTCTAGACC 60.808 57.143 21.83 16.67 0.00 3.85
5371 10312 1.488393 GGCAGCTGGAATTCTAGACCT 59.512 52.381 21.83 7.93 0.00 3.85
5372 10313 2.559440 GCAGCTGGAATTCTAGACCTG 58.441 52.381 21.83 18.93 0.00 4.00
5373 10314 2.169352 GCAGCTGGAATTCTAGACCTGA 59.831 50.000 21.83 0.00 0.00 3.86
5374 10315 3.369892 GCAGCTGGAATTCTAGACCTGAA 60.370 47.826 21.83 0.00 0.00 3.02
5375 10316 4.836825 CAGCTGGAATTCTAGACCTGAAA 58.163 43.478 21.83 0.00 0.00 2.69
5376 10317 5.248640 CAGCTGGAATTCTAGACCTGAAAA 58.751 41.667 21.83 0.00 0.00 2.29
5377 10318 5.707298 CAGCTGGAATTCTAGACCTGAAAAA 59.293 40.000 21.83 0.00 0.00 1.94
5378 10319 5.942826 AGCTGGAATTCTAGACCTGAAAAAG 59.057 40.000 21.83 0.00 0.00 2.27
5379 10320 5.392487 GCTGGAATTCTAGACCTGAAAAAGC 60.392 44.000 21.83 0.00 0.00 3.51
5380 10321 5.880901 TGGAATTCTAGACCTGAAAAAGCT 58.119 37.500 5.23 0.00 0.00 3.74
5381 10322 7.016153 TGGAATTCTAGACCTGAAAAAGCTA 57.984 36.000 5.23 0.00 0.00 3.32
5382 10323 7.633789 TGGAATTCTAGACCTGAAAAAGCTAT 58.366 34.615 5.23 0.00 0.00 2.97
5383 10324 7.554118 TGGAATTCTAGACCTGAAAAAGCTATG 59.446 37.037 5.23 0.00 0.00 2.23
5384 10325 7.554476 GGAATTCTAGACCTGAAAAAGCTATGT 59.446 37.037 5.23 0.00 0.00 2.29
5385 10326 8.499403 AATTCTAGACCTGAAAAAGCTATGTC 57.501 34.615 0.00 0.00 0.00 3.06
5386 10327 6.605471 TCTAGACCTGAAAAAGCTATGTCA 57.395 37.500 0.00 0.00 0.00 3.58
5387 10328 6.634805 TCTAGACCTGAAAAAGCTATGTCAG 58.365 40.000 11.64 11.64 37.77 3.51
5388 10329 5.489792 AGACCTGAAAAAGCTATGTCAGA 57.510 39.130 17.63 0.00 39.94 3.27
5389 10330 5.486526 AGACCTGAAAAAGCTATGTCAGAG 58.513 41.667 17.63 11.86 39.94 3.35
5390 10331 5.247110 AGACCTGAAAAAGCTATGTCAGAGA 59.753 40.000 17.63 0.00 39.94 3.10
5391 10332 6.059787 ACCTGAAAAAGCTATGTCAGAGAT 57.940 37.500 17.63 0.00 39.94 2.75
5392 10333 7.124901 AGACCTGAAAAAGCTATGTCAGAGATA 59.875 37.037 17.63 0.00 39.94 1.98
5393 10334 7.044798 ACCTGAAAAAGCTATGTCAGAGATAC 58.955 38.462 17.63 0.00 39.94 2.24
5394 10335 6.481644 CCTGAAAAAGCTATGTCAGAGATACC 59.518 42.308 17.63 0.00 39.94 2.73
5395 10336 7.187824 TGAAAAAGCTATGTCAGAGATACCT 57.812 36.000 0.00 0.00 0.00 3.08
5396 10337 8.306313 TGAAAAAGCTATGTCAGAGATACCTA 57.694 34.615 0.00 0.00 0.00 3.08
5397 10338 8.928448 TGAAAAAGCTATGTCAGAGATACCTAT 58.072 33.333 0.00 0.00 0.00 2.57
5398 10339 9.771534 GAAAAAGCTATGTCAGAGATACCTATT 57.228 33.333 0.00 0.00 0.00 1.73
5399 10340 9.771534 AAAAAGCTATGTCAGAGATACCTATTC 57.228 33.333 0.00 0.00 0.00 1.75
5400 10341 8.719645 AAAGCTATGTCAGAGATACCTATTCT 57.280 34.615 0.00 0.00 0.00 2.40
5401 10342 7.701539 AGCTATGTCAGAGATACCTATTCTG 57.298 40.000 0.00 0.00 39.69 3.02
5402 10343 7.237982 AGCTATGTCAGAGATACCTATTCTGT 58.762 38.462 0.00 0.00 39.41 3.41
5403 10344 8.387039 AGCTATGTCAGAGATACCTATTCTGTA 58.613 37.037 0.00 0.00 39.41 2.74
5404 10345 8.455682 GCTATGTCAGAGATACCTATTCTGTAC 58.544 40.741 0.00 0.00 39.41 2.90
5405 10346 9.508642 CTATGTCAGAGATACCTATTCTGTACA 57.491 37.037 0.00 0.00 39.41 2.90
5406 10347 8.948401 ATGTCAGAGATACCTATTCTGTACAT 57.052 34.615 0.00 10.30 39.41 2.29
5407 10348 8.397575 TGTCAGAGATACCTATTCTGTACATC 57.602 38.462 0.00 0.00 39.41 3.06
5408 10349 8.221251 TGTCAGAGATACCTATTCTGTACATCT 58.779 37.037 0.00 0.00 39.41 2.90
5409 10350 8.726988 GTCAGAGATACCTATTCTGTACATCTC 58.273 40.741 8.59 8.59 39.41 2.75
5410 10351 7.885922 TCAGAGATACCTATTCTGTACATCTCC 59.114 40.741 11.75 0.00 39.41 3.71
5411 10352 7.667635 CAGAGATACCTATTCTGTACATCTCCA 59.332 40.741 11.75 0.00 34.92 3.86
5412 10353 8.228206 AGAGATACCTATTCTGTACATCTCCAA 58.772 37.037 11.75 0.00 34.27 3.53
5413 10354 8.783660 AGATACCTATTCTGTACATCTCCAAA 57.216 34.615 0.00 0.00 0.00 3.28
5414 10355 9.386122 AGATACCTATTCTGTACATCTCCAAAT 57.614 33.333 0.00 0.00 0.00 2.32
5415 10356 9.429359 GATACCTATTCTGTACATCTCCAAATG 57.571 37.037 0.00 0.00 0.00 2.32
5416 10357 7.200434 ACCTATTCTGTACATCTCCAAATGT 57.800 36.000 0.00 0.00 42.41 2.71
5417 10358 8.319057 ACCTATTCTGTACATCTCCAAATGTA 57.681 34.615 0.00 0.00 40.32 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 4.194720 GCTCGATCTCGGCGTGGT 62.195 66.667 6.85 0.00 40.29 4.16
259 260 2.259818 CTGCTTCACTCGAGCGGT 59.740 61.111 13.61 0.00 43.02 5.68
406 408 5.360591 TCAACAAACACGGCCAAATTTAAT 58.639 33.333 2.24 0.00 0.00 1.40
567 570 1.596477 CGCAGGCTCTAAGGGCATC 60.596 63.158 0.00 0.00 0.00 3.91
568 571 1.915078 AACGCAGGCTCTAAGGGCAT 61.915 55.000 0.00 0.00 0.00 4.40
569 572 2.592993 AACGCAGGCTCTAAGGGCA 61.593 57.895 0.00 0.00 0.00 5.36
570 573 2.109126 CAACGCAGGCTCTAAGGGC 61.109 63.158 0.00 0.00 0.00 5.19
571 574 1.450312 CCAACGCAGGCTCTAAGGG 60.450 63.158 0.00 0.00 0.00 3.95
572 575 0.036388 TTCCAACGCAGGCTCTAAGG 60.036 55.000 0.00 0.00 0.00 2.69
573 576 2.029838 ATTCCAACGCAGGCTCTAAG 57.970 50.000 0.00 0.00 0.00 2.18
574 577 2.083774 CAATTCCAACGCAGGCTCTAA 58.916 47.619 0.00 0.00 0.00 2.10
575 578 1.737838 CAATTCCAACGCAGGCTCTA 58.262 50.000 0.00 0.00 0.00 2.43
576 579 1.589716 GCAATTCCAACGCAGGCTCT 61.590 55.000 0.00 0.00 0.00 4.09
577 580 1.153958 GCAATTCCAACGCAGGCTC 60.154 57.895 0.00 0.00 0.00 4.70
578 581 2.639327 GGCAATTCCAACGCAGGCT 61.639 57.895 0.00 0.00 34.01 4.58
579 582 2.125952 GGCAATTCCAACGCAGGC 60.126 61.111 0.00 0.00 34.01 4.85
580 583 1.535204 AAGGGCAATTCCAACGCAGG 61.535 55.000 0.00 0.00 36.21 4.85
581 584 1.135402 GTAAGGGCAATTCCAACGCAG 60.135 52.381 0.00 0.00 36.21 5.18
582 585 0.885196 GTAAGGGCAATTCCAACGCA 59.115 50.000 0.00 0.00 36.21 5.24
583 586 0.172578 GGTAAGGGCAATTCCAACGC 59.827 55.000 0.00 0.00 36.21 4.84
584 587 0.815095 GGGTAAGGGCAATTCCAACG 59.185 55.000 0.00 0.00 36.21 4.10
585 588 2.231716 AGGGTAAGGGCAATTCCAAC 57.768 50.000 0.00 0.00 36.21 3.77
586 589 4.405756 TTAAGGGTAAGGGCAATTCCAA 57.594 40.909 0.00 0.00 36.21 3.53
587 590 4.090819 GTTTAAGGGTAAGGGCAATTCCA 58.909 43.478 0.00 0.00 36.21 3.53
588 591 3.449737 GGTTTAAGGGTAAGGGCAATTCC 59.550 47.826 0.00 0.00 0.00 3.01
589 592 3.129813 CGGTTTAAGGGTAAGGGCAATTC 59.870 47.826 0.00 0.00 0.00 2.17
590 593 3.093814 CGGTTTAAGGGTAAGGGCAATT 58.906 45.455 0.00 0.00 0.00 2.32
591 594 2.730382 CGGTTTAAGGGTAAGGGCAAT 58.270 47.619 0.00 0.00 0.00 3.56
592 595 1.887522 GCGGTTTAAGGGTAAGGGCAA 60.888 52.381 0.00 0.00 0.00 4.52
593 596 0.322726 GCGGTTTAAGGGTAAGGGCA 60.323 55.000 0.00 0.00 0.00 5.36
594 597 1.033746 GGCGGTTTAAGGGTAAGGGC 61.034 60.000 0.00 0.00 0.00 5.19
595 598 0.394762 GGGCGGTTTAAGGGTAAGGG 60.395 60.000 0.00 0.00 0.00 3.95
596 599 0.328926 TGGGCGGTTTAAGGGTAAGG 59.671 55.000 0.00 0.00 0.00 2.69
597 600 1.456296 GTGGGCGGTTTAAGGGTAAG 58.544 55.000 0.00 0.00 0.00 2.34
598 601 0.038021 GGTGGGCGGTTTAAGGGTAA 59.962 55.000 0.00 0.00 0.00 2.85
599 602 0.841594 AGGTGGGCGGTTTAAGGGTA 60.842 55.000 0.00 0.00 0.00 3.69
600 603 0.841594 TAGGTGGGCGGTTTAAGGGT 60.842 55.000 0.00 0.00 0.00 4.34
601 604 0.393402 GTAGGTGGGCGGTTTAAGGG 60.393 60.000 0.00 0.00 0.00 3.95
602 605 0.741927 CGTAGGTGGGCGGTTTAAGG 60.742 60.000 0.00 0.00 0.00 2.69
603 606 0.037046 ACGTAGGTGGGCGGTTTAAG 60.037 55.000 0.00 0.00 0.00 1.85
604 607 0.320596 CACGTAGGTGGGCGGTTTAA 60.321 55.000 7.69 0.00 40.58 1.52
605 608 1.184322 TCACGTAGGTGGGCGGTTTA 61.184 55.000 15.15 0.00 44.50 2.01
606 609 1.833787 ATCACGTAGGTGGGCGGTTT 61.834 55.000 15.15 0.00 44.50 3.27
607 610 2.234913 GATCACGTAGGTGGGCGGTT 62.235 60.000 15.15 0.00 44.50 4.44
608 611 2.682494 ATCACGTAGGTGGGCGGT 60.682 61.111 15.15 0.00 44.50 5.68
609 612 2.106332 GATCACGTAGGTGGGCGG 59.894 66.667 15.15 0.00 44.50 6.13
610 613 2.106332 GGATCACGTAGGTGGGCG 59.894 66.667 15.15 0.00 44.50 6.13
611 614 0.035820 TTTGGATCACGTAGGTGGGC 60.036 55.000 15.15 7.68 44.50 5.36
612 615 1.734163 GTTTGGATCACGTAGGTGGG 58.266 55.000 15.15 0.00 44.50 4.61
613 616 1.355971 CGTTTGGATCACGTAGGTGG 58.644 55.000 15.15 0.00 44.50 4.61
620 623 1.329292 ACACAACACGTTTGGATCACG 59.671 47.619 12.79 2.79 43.52 4.35
621 624 2.353269 TGACACAACACGTTTGGATCAC 59.647 45.455 12.79 0.00 0.00 3.06
622 625 2.633488 TGACACAACACGTTTGGATCA 58.367 42.857 12.79 11.97 0.00 2.92
623 626 3.896648 ATGACACAACACGTTTGGATC 57.103 42.857 12.79 10.25 0.00 3.36
624 627 3.629855 TGAATGACACAACACGTTTGGAT 59.370 39.130 12.79 3.27 0.00 3.41
625 628 3.010420 TGAATGACACAACACGTTTGGA 58.990 40.909 12.79 0.00 0.00 3.53
626 629 3.412981 TGAATGACACAACACGTTTGG 57.587 42.857 12.79 0.00 0.00 3.28
627 630 4.437495 GTGATGAATGACACAACACGTTTG 59.563 41.667 8.35 8.35 37.05 2.93
628 631 4.095632 TGTGATGAATGACACAACACGTTT 59.904 37.500 0.00 0.00 42.72 3.60
629 632 3.625313 TGTGATGAATGACACAACACGTT 59.375 39.130 0.00 0.00 42.72 3.99
630 633 3.202097 TGTGATGAATGACACAACACGT 58.798 40.909 0.00 0.00 42.72 4.49
631 634 3.494251 TCTGTGATGAATGACACAACACG 59.506 43.478 0.00 0.00 44.50 4.49
632 635 4.319766 GGTCTGTGATGAATGACACAACAC 60.320 45.833 0.00 0.00 44.50 3.32
633 636 3.814842 GGTCTGTGATGAATGACACAACA 59.185 43.478 0.00 0.00 44.50 3.33
634 637 4.067896 AGGTCTGTGATGAATGACACAAC 58.932 43.478 0.00 0.00 44.50 3.32
635 638 4.067192 CAGGTCTGTGATGAATGACACAA 58.933 43.478 0.00 0.00 44.50 3.33
636 639 3.071457 ACAGGTCTGTGATGAATGACACA 59.929 43.478 2.46 0.00 43.11 3.72
637 640 3.668447 ACAGGTCTGTGATGAATGACAC 58.332 45.455 2.46 0.00 43.11 3.67
638 641 5.682234 ATACAGGTCTGTGATGAATGACA 57.318 39.130 13.32 0.00 44.63 3.58
639 642 5.295292 CCAATACAGGTCTGTGATGAATGAC 59.705 44.000 13.32 0.00 44.63 3.06
640 643 5.430886 CCAATACAGGTCTGTGATGAATGA 58.569 41.667 13.32 0.00 44.63 2.57
641 644 4.036027 GCCAATACAGGTCTGTGATGAATG 59.964 45.833 13.32 0.00 44.63 2.67
642 645 4.202441 GCCAATACAGGTCTGTGATGAAT 58.798 43.478 13.32 0.00 44.63 2.57
643 646 3.008923 TGCCAATACAGGTCTGTGATGAA 59.991 43.478 13.32 0.00 44.63 2.57
644 647 2.571202 TGCCAATACAGGTCTGTGATGA 59.429 45.455 13.32 0.00 44.63 2.92
645 648 2.941064 CTGCCAATACAGGTCTGTGATG 59.059 50.000 13.32 11.11 44.63 3.07
646 649 3.272574 CTGCCAATACAGGTCTGTGAT 57.727 47.619 13.32 0.01 44.63 3.06
647 650 2.768253 CTGCCAATACAGGTCTGTGA 57.232 50.000 13.32 0.00 44.63 3.58
655 658 1.959042 CAGCCTACCTGCCAATACAG 58.041 55.000 0.00 0.00 34.21 2.74
664 667 2.084546 GTGTTTTAGGCAGCCTACCTG 58.915 52.381 21.76 0.00 44.67 4.00
665 668 1.338769 CGTGTTTTAGGCAGCCTACCT 60.339 52.381 21.76 0.00 35.63 3.08
666 669 1.084289 CGTGTTTTAGGCAGCCTACC 58.916 55.000 21.76 12.23 35.63 3.18
667 670 1.084289 CCGTGTTTTAGGCAGCCTAC 58.916 55.000 21.76 13.28 35.63 3.18
668 671 0.978151 TCCGTGTTTTAGGCAGCCTA 59.022 50.000 18.06 18.06 34.61 3.93
669 672 0.605589 GTCCGTGTTTTAGGCAGCCT 60.606 55.000 20.63 20.63 37.71 4.58
670 673 1.873863 GTCCGTGTTTTAGGCAGCC 59.126 57.895 1.84 1.84 0.00 4.85
671 674 0.947180 TCGTCCGTGTTTTAGGCAGC 60.947 55.000 0.00 0.00 0.00 5.25
672 675 0.788391 GTCGTCCGTGTTTTAGGCAG 59.212 55.000 0.00 0.00 0.00 4.85
673 676 0.600782 GGTCGTCCGTGTTTTAGGCA 60.601 55.000 0.00 0.00 0.00 4.75
674 677 2.156542 GGTCGTCCGTGTTTTAGGC 58.843 57.895 0.00 0.00 0.00 3.93
685 688 1.883084 GATCATGCCACGGTCGTCC 60.883 63.158 0.00 0.00 0.00 4.79
686 689 0.530650 ATGATCATGCCACGGTCGTC 60.531 55.000 7.59 0.00 0.00 4.20
687 690 0.750249 TATGATCATGCCACGGTCGT 59.250 50.000 18.72 0.00 0.00 4.34
688 691 1.864565 TTATGATCATGCCACGGTCG 58.135 50.000 18.72 0.00 0.00 4.79
689 692 3.466836 TCTTTATGATCATGCCACGGTC 58.533 45.455 18.72 0.00 0.00 4.79
690 693 3.558931 TCTTTATGATCATGCCACGGT 57.441 42.857 18.72 0.00 0.00 4.83
705 708 0.322187 GCCCAAGTCCGGCTTCTTTA 60.322 55.000 7.99 0.00 43.48 1.85
740 743 2.215451 CTATTGGGCAGCCTGGTGGT 62.215 60.000 12.43 0.00 35.27 4.16
744 747 0.604780 CGATCTATTGGGCAGCCTGG 60.605 60.000 12.43 0.00 0.00 4.45
747 750 0.106708 TGTCGATCTATTGGGCAGCC 59.893 55.000 1.26 1.26 0.00 4.85
770 775 1.934589 CATTGAATACACGGCTCCGA 58.065 50.000 15.95 0.00 42.83 4.55
776 781 2.723209 CTGCATGCATTGAATACACGG 58.277 47.619 22.97 0.21 0.00 4.94
800 806 5.477637 TCATCATGCATATATGGTTGGTTGG 59.522 40.000 14.51 0.00 0.00 3.77
931 943 1.202325 GGTGTAGTGTGTGTGTGTCGA 60.202 52.381 0.00 0.00 0.00 4.20
940 966 1.183030 TGGCTAGCGGTGTAGTGTGT 61.183 55.000 9.00 0.00 0.00 3.72
941 967 0.458543 CTGGCTAGCGGTGTAGTGTG 60.459 60.000 9.00 0.00 0.00 3.82
942 968 1.890894 CTGGCTAGCGGTGTAGTGT 59.109 57.895 9.00 0.00 0.00 3.55
943 969 1.519455 GCTGGCTAGCGGTGTAGTG 60.519 63.158 6.22 0.00 40.67 2.74
944 970 2.893398 GCTGGCTAGCGGTGTAGT 59.107 61.111 6.22 0.00 40.67 2.73
979 1017 1.797211 GCCTCGCTCCGTGCTACTAT 61.797 60.000 0.00 0.00 40.11 2.12
986 1024 3.197790 CCATTGCCTCGCTCCGTG 61.198 66.667 0.00 0.00 0.00 4.94
994 1032 2.159028 GGTAGAGAGACACCATTGCCTC 60.159 54.545 0.00 0.00 34.77 4.70
996 1034 1.471676 CGGTAGAGAGACACCATTGCC 60.472 57.143 0.00 0.00 34.25 4.52
1030 1068 0.530870 GGGAGAAGCGCCATCAGTAC 60.531 60.000 2.29 0.00 0.00 2.73
1098 1136 1.934589 TCGAATCGCCGAACATGAAT 58.065 45.000 0.00 0.00 35.42 2.57
1236 1274 1.035932 ACGTACCTAGCATGTCGCCT 61.036 55.000 0.00 0.00 44.04 5.52
1239 1277 1.328680 ACGTACGTACCTAGCATGTCG 59.671 52.381 21.41 6.74 0.00 4.35
1262 1303 4.796606 TCCCGGTTGCTACTACTTACTAT 58.203 43.478 0.00 0.00 0.00 2.12
1271 1833 1.609501 TCAGCTCCCGGTTGCTACT 60.610 57.895 16.44 0.00 37.81 2.57
1334 2799 4.757149 CCTCCGTCTCAAAATTCTTGTCTT 59.243 41.667 0.00 0.00 0.00 3.01
1335 2800 4.040461 TCCTCCGTCTCAAAATTCTTGTCT 59.960 41.667 0.00 0.00 0.00 3.41
1342 2807 8.101419 AGTAAATACTTCCTCCGTCTCAAAATT 58.899 33.333 0.00 0.00 31.13 1.82
1402 3027 1.102809 CCGGTGCATGCCATACACAT 61.103 55.000 16.68 0.00 36.00 3.21
1426 3132 7.201857 GCTGCTCCATTAGTTTCCAATTTAGAT 60.202 37.037 0.00 0.00 0.00 1.98
1428 3134 6.096001 AGCTGCTCCATTAGTTTCCAATTTAG 59.904 38.462 0.00 0.00 0.00 1.85
1490 3202 2.872245 ACATTCCCGCGTATTTCTCATG 59.128 45.455 4.92 0.00 0.00 3.07
1498 3210 2.691526 TCAACTAGACATTCCCGCGTAT 59.308 45.455 4.92 0.00 0.00 3.06
1499 3211 2.093890 TCAACTAGACATTCCCGCGTA 58.906 47.619 4.92 0.00 0.00 4.42
1500 3212 0.892755 TCAACTAGACATTCCCGCGT 59.107 50.000 4.92 0.00 0.00 6.01
1501 3213 1.927174 CTTCAACTAGACATTCCCGCG 59.073 52.381 0.00 0.00 0.00 6.46
1540 3254 3.883489 AGCCACACTTTTCTTACCTTGTC 59.117 43.478 0.00 0.00 0.00 3.18
1624 3350 2.301870 TGAGACGTGGGAGTATTTGCTT 59.698 45.455 0.00 0.00 0.00 3.91
1638 3367 5.768164 AGTTGGGACATTTATTTTGAGACGT 59.232 36.000 0.00 0.00 39.30 4.34
1657 3388 3.208747 ACACAGAGGGTACAAAGTTGG 57.791 47.619 0.00 0.00 0.00 3.77
1668 3399 7.254455 CGCTCTTATATTTGTTTACACAGAGGG 60.254 40.741 0.00 0.00 33.22 4.30
1669 3400 7.277981 ACGCTCTTATATTTGTTTACACAGAGG 59.722 37.037 0.00 0.00 33.22 3.69
1670 3401 8.186178 ACGCTCTTATATTTGTTTACACAGAG 57.814 34.615 0.00 0.00 33.22 3.35
1671 3402 8.542497 AACGCTCTTATATTTGTTTACACAGA 57.458 30.769 0.00 0.00 33.22 3.41
1928 4022 5.222079 TGTCTCCTGCAACAATACTACAA 57.778 39.130 0.00 0.00 0.00 2.41
1966 4386 4.568359 CCTATGTACATGCACAGTGTTCTC 59.432 45.833 18.81 0.00 0.00 2.87
2039 4516 1.086696 AATGCACGACGGATGGAAAG 58.913 50.000 0.00 0.00 0.00 2.62
2068 4745 2.378038 TGTGCATTAAATGGAGGAGGC 58.622 47.619 0.00 0.00 0.00 4.70
2084 6000 3.186613 GGAGTAGTTAGTTGTGCTTGTGC 59.813 47.826 0.00 0.00 40.20 4.57
2085 6001 4.377021 TGGAGTAGTTAGTTGTGCTTGTG 58.623 43.478 0.00 0.00 0.00 3.33
2086 6002 4.682778 TGGAGTAGTTAGTTGTGCTTGT 57.317 40.909 0.00 0.00 0.00 3.16
2087 6003 5.237815 TGATGGAGTAGTTAGTTGTGCTTG 58.762 41.667 0.00 0.00 0.00 4.01
2088 6004 5.483685 TGATGGAGTAGTTAGTTGTGCTT 57.516 39.130 0.00 0.00 0.00 3.91
2089 6005 5.423015 CATGATGGAGTAGTTAGTTGTGCT 58.577 41.667 0.00 0.00 0.00 4.40
2205 6392 5.049405 GGTTCTTCTGTCACGTGATCAATTT 60.049 40.000 23.12 0.00 0.00 1.82
2266 6462 0.251121 TTGCTTGATCCAAAGGCGGA 60.251 50.000 0.00 0.00 40.07 5.54
2312 6515 9.337396 TCTAATGTATTTGTTTTGTCAGACTGT 57.663 29.630 1.59 0.00 0.00 3.55
2363 6566 5.870978 ACTTGTAACGGTAGCGACATAAATT 59.129 36.000 22.88 5.31 0.00 1.82
2370 6573 3.052036 TCAAACTTGTAACGGTAGCGAC 58.948 45.455 22.88 10.33 0.00 5.19
2398 6601 4.080638 TGGTATGCATGTTGTGATACCAGA 60.081 41.667 10.16 0.00 41.18 3.86
2400 6603 4.227864 TGGTATGCATGTTGTGATACCA 57.772 40.909 10.16 9.58 42.34 3.25
2401 6604 5.065914 AGATGGTATGCATGTTGTGATACC 58.934 41.667 10.16 6.76 39.21 2.73
2402 6605 7.728847 TTAGATGGTATGCATGTTGTGATAC 57.271 36.000 10.16 0.00 0.00 2.24
2403 6606 8.922931 AATTAGATGGTATGCATGTTGTGATA 57.077 30.769 10.16 0.00 0.00 2.15
2405 6608 6.018016 CGAATTAGATGGTATGCATGTTGTGA 60.018 38.462 10.16 0.00 0.00 3.58
2406 6609 6.138088 CGAATTAGATGGTATGCATGTTGTG 58.862 40.000 10.16 0.00 0.00 3.33
2407 6610 5.239306 CCGAATTAGATGGTATGCATGTTGT 59.761 40.000 10.16 0.00 0.00 3.32
2410 6615 3.753272 GCCGAATTAGATGGTATGCATGT 59.247 43.478 10.16 0.00 0.00 3.21
2428 6633 2.185867 GCTTGGTGATACCGCCGA 59.814 61.111 0.00 0.00 45.85 5.54
2435 6640 2.382770 ATGGGGCGGCTTGGTGATA 61.383 57.895 9.56 0.00 0.00 2.15
2447 6652 1.751927 CTCTTGCTCACCATGGGGC 60.752 63.158 18.09 17.02 37.90 5.80
2461 6666 4.287067 TCTTCTAGATTGGTTGGTGCTCTT 59.713 41.667 0.00 0.00 0.00 2.85
2474 6680 3.319689 GCTCGCTAAGGGTCTTCTAGATT 59.680 47.826 0.00 0.00 0.00 2.40
2480 6686 1.137086 TGATGCTCGCTAAGGGTCTTC 59.863 52.381 0.00 0.00 0.00 2.87
2503 6709 2.355108 GGTGGATTCTAGAGCTTGCACA 60.355 50.000 18.73 2.41 32.75 4.57
2505 6711 1.134699 CGGTGGATTCTAGAGCTTGCA 60.135 52.381 0.00 0.00 0.00 4.08
2509 6715 0.687757 TGGCGGTGGATTCTAGAGCT 60.688 55.000 0.00 0.00 0.00 4.09
2537 6743 0.249868 CTCCTGAAGTTGCCACGACA 60.250 55.000 0.00 0.00 0.00 4.35
2543 6749 3.340814 TTGATCTCTCCTGAAGTTGCC 57.659 47.619 0.00 0.00 0.00 4.52
2544 6750 3.065095 GCATTGATCTCTCCTGAAGTTGC 59.935 47.826 0.00 0.00 0.00 4.17
2562 6768 1.138266 GCCTGGCAAGATCAATGCATT 59.862 47.619 15.17 5.99 45.60 3.56
2564 6770 1.324740 GGCCTGGCAAGATCAATGCA 61.325 55.000 22.05 0.00 45.60 3.96
2633 6839 0.521242 GACGCGTGTTGATGAATGCC 60.521 55.000 20.70 0.00 0.00 4.40
2636 6842 3.743911 TGTTTAGACGCGTGTTGATGAAT 59.256 39.130 20.70 0.00 0.00 2.57
2638 6844 2.729360 CTGTTTAGACGCGTGTTGATGA 59.271 45.455 20.70 0.00 0.00 2.92
2750 6987 6.575162 ACAGTGGATATTCAAGTTTTCACC 57.425 37.500 0.00 0.00 0.00 4.02
2773 7017 5.984926 GCTTGATCAAGAAAAATGTCACCAA 59.015 36.000 34.43 0.00 40.79 3.67
2794 7038 1.362224 TCCCAGCCTAGAAACTGCTT 58.638 50.000 0.00 0.00 31.77 3.91
2828 7072 0.909623 CATTTCCGAGGTAGGGTGGT 59.090 55.000 0.00 0.00 0.00 4.16
2961 7205 9.664332 GAGGGTATATACTTGACGAGAACTATA 57.336 37.037 12.54 0.00 0.00 1.31
2982 7231 4.939439 GTGACATATTTTGTTACCGAGGGT 59.061 41.667 0.00 0.00 38.54 4.34
2985 7234 5.965334 GCATGTGACATATTTTGTTACCGAG 59.035 40.000 0.00 0.00 42.58 4.63
2987 7236 5.635866 TGCATGTGACATATTTTGTTACCG 58.364 37.500 0.00 0.00 42.58 4.02
2988 7237 7.483307 AGATGCATGTGACATATTTTGTTACC 58.517 34.615 2.46 0.00 42.58 2.85
2989 7238 8.183536 TGAGATGCATGTGACATATTTTGTTAC 58.816 33.333 2.46 0.00 43.31 2.50
2990 7239 8.278729 TGAGATGCATGTGACATATTTTGTTA 57.721 30.769 2.46 0.00 39.18 2.41
2991 7240 7.160547 TGAGATGCATGTGACATATTTTGTT 57.839 32.000 2.46 0.00 39.18 2.83
2992 7241 6.762702 TGAGATGCATGTGACATATTTTGT 57.237 33.333 2.46 0.00 42.79 2.83
2993 7242 8.565416 AGTATGAGATGCATGTGACATATTTTG 58.435 33.333 2.46 0.00 37.87 2.44
2994 7243 8.687292 AGTATGAGATGCATGTGACATATTTT 57.313 30.769 2.46 0.00 37.87 1.82
2995 7244 9.433153 CTAGTATGAGATGCATGTGACATATTT 57.567 33.333 2.46 1.63 37.87 1.40
2997 7246 8.358582 TCTAGTATGAGATGCATGTGACATAT 57.641 34.615 2.46 0.00 37.87 1.78
2998 7247 7.449704 ACTCTAGTATGAGATGCATGTGACATA 59.550 37.037 2.46 2.30 37.87 2.29
3000 7249 5.595952 ACTCTAGTATGAGATGCATGTGACA 59.404 40.000 2.46 0.00 37.87 3.58
3001 7250 6.083098 ACTCTAGTATGAGATGCATGTGAC 57.917 41.667 2.46 0.00 37.87 3.67
3002 7251 6.721704 AACTCTAGTATGAGATGCATGTGA 57.278 37.500 2.46 0.00 37.87 3.58
3003 7252 6.292757 GCAAACTCTAGTATGAGATGCATGTG 60.293 42.308 2.46 0.00 43.11 3.21
3004 7253 5.757320 GCAAACTCTAGTATGAGATGCATGT 59.243 40.000 2.46 0.00 43.11 3.21
3005 7254 5.756833 TGCAAACTCTAGTATGAGATGCATG 59.243 40.000 2.46 0.00 45.38 4.06
3007 7256 5.343307 TGCAAACTCTAGTATGAGATGCA 57.657 39.130 17.95 17.95 46.55 3.96
3009 7258 7.012138 AGCATTTGCAAACTCTAGTATGAGATG 59.988 37.037 15.41 4.69 45.16 2.90
3014 7263 9.793252 AAATTAGCATTTGCAAACTCTAGTATG 57.207 29.630 15.41 7.39 45.16 2.39
3053 7306 2.555199 CCCAGTACTTGATGTAGCAGC 58.445 52.381 0.00 0.00 0.00 5.25
3064 7317 3.577805 AGTTCAAGTTGCCCAGTACTT 57.422 42.857 0.00 0.00 35.06 2.24
3115 7368 4.274950 GTCATCTCCTCTTCTCCGACTAAG 59.725 50.000 0.00 0.00 0.00 2.18
3169 7422 2.974623 GTCATTTGCCCCCATGACA 58.025 52.632 7.30 0.00 45.90 3.58
3244 7497 8.292448 GCAGAAGAGACAAGAAATTTCACATAA 58.708 33.333 19.99 0.00 0.00 1.90
3247 7500 5.824624 AGCAGAAGAGACAAGAAATTTCACA 59.175 36.000 19.99 0.00 0.00 3.58
3335 7605 7.445096 TGTGCAAAATGAGAGAGTCAAATAAGA 59.555 33.333 0.00 0.00 39.19 2.10
3352 7622 6.862209 TGAACACTAGAACTTTGTGCAAAAT 58.138 32.000 0.00 0.00 35.33 1.82
3396 7666 8.154649 AGTTCGAGTGAAATATGTGAAACTTT 57.845 30.769 0.00 0.00 34.62 2.66
3417 7687 4.738252 GGATGGTTTGTCGTTTTTGAGTTC 59.262 41.667 0.00 0.00 0.00 3.01
3446 7716 9.924650 GACTAAAGGAAACTACTTGATGAAGTA 57.075 33.333 4.65 4.65 42.66 2.24
3447 7717 7.599245 CGACTAAAGGAAACTACTTGATGAAGT 59.401 37.037 2.35 2.35 44.90 3.01
3448 7718 7.063544 CCGACTAAAGGAAACTACTTGATGAAG 59.936 40.741 0.00 0.00 42.68 3.02
3449 7719 6.872020 CCGACTAAAGGAAACTACTTGATGAA 59.128 38.462 0.00 0.00 42.68 2.57
3486 7762 9.677567 CAGCAATGTACTAAATTTACAAACACT 57.322 29.630 0.00 0.00 33.22 3.55
3515 7791 9.660180 GTCAAGAGAAGTAGATGGTAGAAAAAT 57.340 33.333 0.00 0.00 0.00 1.82
3609 7888 8.236585 TGCCAATTAAACAGCAGATATATGTT 57.763 30.769 0.00 0.00 38.76 2.71
3689 7968 8.819974 GCACCCATTTCATTTAATTTCTGTATG 58.180 33.333 0.00 0.00 0.00 2.39
3915 8194 5.064325 CAGATCGTTGAATGAGATCAAGCAA 59.936 40.000 7.32 0.00 42.21 3.91
3932 8211 6.878923 TGAACTCACCATAAAAATCAGATCGT 59.121 34.615 0.00 0.00 0.00 3.73
3936 8215 8.298854 CAATGTGAACTCACCATAAAAATCAGA 58.701 33.333 7.37 0.00 45.88 3.27
3955 8234 4.465632 AGCAACCGAGTATACAATGTGA 57.534 40.909 5.50 0.00 0.00 3.58
3962 8241 5.402867 GCTCTGAAATAGCAACCGAGTATAC 59.597 44.000 0.00 0.00 39.83 1.47
4086 9025 6.633500 TCTGGTTACTTCAATTTTCCTGTG 57.367 37.500 0.00 0.00 0.00 3.66
4092 9031 7.404671 ACACAGTTCTGGTTACTTCAATTTT 57.595 32.000 4.82 0.00 0.00 1.82
4106 9045 6.146184 CCATGTTAGTTCACTACACAGTTCTG 59.854 42.308 0.00 0.00 30.46 3.02
4395 9334 0.546598 AGGCCTTTTCGGTAGGATGG 59.453 55.000 0.00 0.00 34.56 3.51
4485 9425 7.744087 TCTAATAATATTTGTTCATGCGCCT 57.256 32.000 4.18 0.00 0.00 5.52
4487 9427 9.450807 AGTTTCTAATAATATTTGTTCATGCGC 57.549 29.630 0.00 0.00 0.00 6.09
4528 9468 2.841442 AGTGCCAGTGAGTACTTTCC 57.159 50.000 0.00 0.00 34.07 3.13
4531 9471 5.127356 GTCCTAATAGTGCCAGTGAGTACTT 59.873 44.000 0.00 0.00 34.07 2.24
4583 9523 1.618837 AGGAGCGAACTTTCACTAGCA 59.381 47.619 0.00 0.00 0.00 3.49
4605 9545 5.250774 AGCCTCTAGTCTTTACCCATTTTGA 59.749 40.000 0.00 0.00 0.00 2.69
4607 9547 5.627040 CGAGCCTCTAGTCTTTACCCATTTT 60.627 44.000 0.00 0.00 0.00 1.82
4620 9560 5.241949 CCTATGTATTTCACGAGCCTCTAGT 59.758 44.000 0.00 0.00 0.00 2.57
4631 9571 9.072294 CCAAAACGAATTTCCTATGTATTTCAC 57.928 33.333 0.00 0.00 0.00 3.18
4643 9583 3.972502 CGAGTTGACCAAAACGAATTTCC 59.027 43.478 0.00 0.00 35.13 3.13
4650 9590 4.347813 ACATTTTCGAGTTGACCAAAACG 58.652 39.130 0.00 0.00 35.13 3.60
4748 9688 0.311790 CCACCACATCTGTGCACAAC 59.688 55.000 21.98 0.00 44.34 3.32
4753 9693 1.317613 TTCAACCACCACATCTGTGC 58.682 50.000 4.77 0.00 44.34 4.57
4782 9722 2.434336 TGCTAATGGACGGTGCTAGAAT 59.566 45.455 0.31 0.00 0.00 2.40
4818 9758 0.981183 TAACAGGCACGTTCATCCCT 59.019 50.000 0.00 0.00 0.00 4.20
4830 9770 3.995048 AGAGTTTAGCGAAGTTAACAGGC 59.005 43.478 8.61 7.83 31.72 4.85
4859 9799 8.912988 CAACCAGAACCAAATACAATATACCAT 58.087 33.333 0.00 0.00 0.00 3.55
4875 9815 5.453567 AATACTTCTTTGCAACCAGAACC 57.546 39.130 9.09 0.00 0.00 3.62
4876 9816 6.273071 ACAAATACTTCTTTGCAACCAGAAC 58.727 36.000 9.09 0.00 39.26 3.01
4933 9873 7.591426 GCAAGAAAACGAAATCACTAAATCAGT 59.409 33.333 0.00 0.00 38.32 3.41
4941 9881 4.097892 ACCAAGCAAGAAAACGAAATCACT 59.902 37.500 0.00 0.00 0.00 3.41
4943 9883 4.097135 TCACCAAGCAAGAAAACGAAATCA 59.903 37.500 0.00 0.00 0.00 2.57
4949 9889 4.610945 AGAAATCACCAAGCAAGAAAACG 58.389 39.130 0.00 0.00 0.00 3.60
4962 9902 9.822185 ATTAAATTGGATTGCTAAGAAATCACC 57.178 29.630 4.89 0.00 36.03 4.02
4996 9936 2.074576 GGGCTGAAACGGTAAGTTCTC 58.925 52.381 0.00 0.00 43.37 2.87
5006 9946 1.714899 CTTATGCCCGGGCTGAAACG 61.715 60.000 43.34 23.44 42.51 3.60
5015 9955 6.391227 AAAGAAACATAATCTTATGCCCGG 57.609 37.500 9.34 0.00 43.30 5.73
5050 9990 3.119849 CCTCATTTAAGGACCAACAAGCG 60.120 47.826 0.00 0.00 38.87 4.68
5061 10001 5.995446 AGACTCTAAAGGCCTCATTTAAGG 58.005 41.667 5.23 0.00 39.62 2.69
5068 10008 4.838986 AGTTGTAAGACTCTAAAGGCCTCA 59.161 41.667 5.23 0.00 0.00 3.86
5075 10016 9.962783 GTTGAACTCTAGTTGTAAGACTCTAAA 57.037 33.333 0.00 0.00 38.56 1.85
5103 10044 9.717942 CCTATCGATATCTTGAATTTCCTTTCT 57.282 33.333 5.40 0.00 0.00 2.52
5136 10077 1.961277 CAGTCACTTGTGACCCCGC 60.961 63.158 24.78 5.46 39.50 6.13
5171 10112 0.836606 TATCCCTCGGATTGCAAGCA 59.163 50.000 17.68 0.00 39.79 3.91
5172 10113 2.079925 GATATCCCTCGGATTGCAAGC 58.920 52.381 6.04 6.04 39.79 4.01
5173 10114 3.407424 TGATATCCCTCGGATTGCAAG 57.593 47.619 4.94 0.00 39.79 4.01
5205 10146 4.758165 GGACGTATCAACCCTTTCTTTTCA 59.242 41.667 0.00 0.00 0.00 2.69
5219 10160 4.639755 ACATGATGCAAAATGGACGTATCA 59.360 37.500 14.45 0.00 36.43 2.15
5220 10161 5.173774 ACATGATGCAAAATGGACGTATC 57.826 39.130 14.45 0.00 0.00 2.24
5221 10162 5.581126 AACATGATGCAAAATGGACGTAT 57.419 34.783 14.45 0.00 0.00 3.06
5222 10163 5.384063 AAACATGATGCAAAATGGACGTA 57.616 34.783 14.45 0.00 0.00 3.57
5223 10164 3.940209 AACATGATGCAAAATGGACGT 57.060 38.095 14.45 0.00 0.00 4.34
5224 10165 5.594724 AAAAACATGATGCAAAATGGACG 57.405 34.783 14.45 0.00 0.00 4.79
5278 10219 8.726988 GCATTAGAATTACTCCACAAAGTGTTA 58.273 33.333 0.00 0.00 0.00 2.41
5279 10220 7.309194 GGCATTAGAATTACTCCACAAAGTGTT 60.309 37.037 0.00 0.00 0.00 3.32
5280 10221 6.151144 GGCATTAGAATTACTCCACAAAGTGT 59.849 38.462 0.00 0.00 0.00 3.55
5281 10222 6.375455 AGGCATTAGAATTACTCCACAAAGTG 59.625 38.462 0.00 0.00 0.00 3.16
5282 10223 6.485171 AGGCATTAGAATTACTCCACAAAGT 58.515 36.000 0.00 0.00 0.00 2.66
5283 10224 7.396540 AAGGCATTAGAATTACTCCACAAAG 57.603 36.000 0.00 0.00 0.00 2.77
5284 10225 7.775053 AAAGGCATTAGAATTACTCCACAAA 57.225 32.000 0.00 0.00 0.00 2.83
5285 10226 7.669722 AGAAAAGGCATTAGAATTACTCCACAA 59.330 33.333 0.00 0.00 0.00 3.33
5286 10227 7.175104 AGAAAAGGCATTAGAATTACTCCACA 58.825 34.615 0.00 0.00 0.00 4.17
5287 10228 7.554476 AGAGAAAAGGCATTAGAATTACTCCAC 59.446 37.037 0.00 0.00 0.00 4.02
5288 10229 7.633789 AGAGAAAAGGCATTAGAATTACTCCA 58.366 34.615 0.00 0.00 0.00 3.86
5289 10230 7.770897 TGAGAGAAAAGGCATTAGAATTACTCC 59.229 37.037 0.00 0.00 0.00 3.85
5290 10231 8.723942 TGAGAGAAAAGGCATTAGAATTACTC 57.276 34.615 0.00 0.00 0.00 2.59
5301 10242 9.075678 CCTTTCATATTATGAGAGAAAAGGCAT 57.924 33.333 20.36 0.00 42.37 4.40
5302 10243 8.055181 ACCTTTCATATTATGAGAGAAAAGGCA 58.945 33.333 22.68 0.66 42.37 4.75
5303 10244 8.457238 ACCTTTCATATTATGAGAGAAAAGGC 57.543 34.615 22.68 0.00 42.37 4.35
5317 10258 8.934023 TCCTCTTTGTGTAAACCTTTCATATT 57.066 30.769 0.00 0.00 0.00 1.28
5318 10259 8.934023 TTCCTCTTTGTGTAAACCTTTCATAT 57.066 30.769 0.00 0.00 0.00 1.78
5319 10260 8.215050 TCTTCCTCTTTGTGTAAACCTTTCATA 58.785 33.333 0.00 0.00 0.00 2.15
5320 10261 7.060421 TCTTCCTCTTTGTGTAAACCTTTCAT 58.940 34.615 0.00 0.00 0.00 2.57
5321 10262 6.419791 TCTTCCTCTTTGTGTAAACCTTTCA 58.580 36.000 0.00 0.00 0.00 2.69
5322 10263 6.937436 TCTTCCTCTTTGTGTAAACCTTTC 57.063 37.500 0.00 0.00 0.00 2.62
5323 10264 7.898014 ATTCTTCCTCTTTGTGTAAACCTTT 57.102 32.000 0.00 0.00 0.00 3.11
5324 10265 7.447545 GGTATTCTTCCTCTTTGTGTAAACCTT 59.552 37.037 0.00 0.00 0.00 3.50
5325 10266 6.940867 GGTATTCTTCCTCTTTGTGTAAACCT 59.059 38.462 0.00 0.00 0.00 3.50
5326 10267 6.128363 CGGTATTCTTCCTCTTTGTGTAAACC 60.128 42.308 0.00 0.00 0.00 3.27
5327 10268 6.128363 CCGGTATTCTTCCTCTTTGTGTAAAC 60.128 42.308 0.00 0.00 0.00 2.01
5328 10269 5.935789 CCGGTATTCTTCCTCTTTGTGTAAA 59.064 40.000 0.00 0.00 0.00 2.01
5329 10270 5.484715 CCGGTATTCTTCCTCTTTGTGTAA 58.515 41.667 0.00 0.00 0.00 2.41
5330 10271 4.622220 GCCGGTATTCTTCCTCTTTGTGTA 60.622 45.833 1.90 0.00 0.00 2.90
5331 10272 3.868754 GCCGGTATTCTTCCTCTTTGTGT 60.869 47.826 1.90 0.00 0.00 3.72
5332 10273 2.678336 GCCGGTATTCTTCCTCTTTGTG 59.322 50.000 1.90 0.00 0.00 3.33
5333 10274 2.304761 TGCCGGTATTCTTCCTCTTTGT 59.695 45.455 1.90 0.00 0.00 2.83
5334 10275 2.939103 CTGCCGGTATTCTTCCTCTTTG 59.061 50.000 1.90 0.00 0.00 2.77
5335 10276 2.681097 GCTGCCGGTATTCTTCCTCTTT 60.681 50.000 1.90 0.00 0.00 2.52
5336 10277 1.134371 GCTGCCGGTATTCTTCCTCTT 60.134 52.381 1.90 0.00 0.00 2.85
5337 10278 0.466124 GCTGCCGGTATTCTTCCTCT 59.534 55.000 1.90 0.00 0.00 3.69
5338 10279 0.466124 AGCTGCCGGTATTCTTCCTC 59.534 55.000 1.90 0.00 0.00 3.71
5339 10280 0.179000 CAGCTGCCGGTATTCTTCCT 59.821 55.000 0.00 0.00 0.00 3.36
5340 10281 0.815615 CCAGCTGCCGGTATTCTTCC 60.816 60.000 8.66 0.00 0.00 3.46
5341 10282 0.178068 TCCAGCTGCCGGTATTCTTC 59.822 55.000 8.66 0.00 0.00 2.87
5342 10283 0.618458 TTCCAGCTGCCGGTATTCTT 59.382 50.000 8.66 0.00 0.00 2.52
5343 10284 0.839946 ATTCCAGCTGCCGGTATTCT 59.160 50.000 8.66 0.00 0.00 2.40
5344 10285 1.604278 GAATTCCAGCTGCCGGTATTC 59.396 52.381 15.51 15.51 34.47 1.75
5345 10286 1.212935 AGAATTCCAGCTGCCGGTATT 59.787 47.619 8.66 6.48 0.00 1.89
5346 10287 0.839946 AGAATTCCAGCTGCCGGTAT 59.160 50.000 8.66 0.00 0.00 2.73
5347 10288 1.412710 CTAGAATTCCAGCTGCCGGTA 59.587 52.381 8.66 0.00 0.00 4.02
5348 10289 0.179000 CTAGAATTCCAGCTGCCGGT 59.821 55.000 8.66 0.00 0.00 5.28
5349 10290 0.465705 TCTAGAATTCCAGCTGCCGG 59.534 55.000 8.66 0.00 0.00 6.13
5350 10291 1.576356 GTCTAGAATTCCAGCTGCCG 58.424 55.000 8.66 0.00 0.00 5.69
5351 10292 1.488393 AGGTCTAGAATTCCAGCTGCC 59.512 52.381 8.66 0.00 0.00 4.85
5352 10293 2.169352 TCAGGTCTAGAATTCCAGCTGC 59.831 50.000 8.66 0.00 34.92 5.25
5353 10294 4.478206 TTCAGGTCTAGAATTCCAGCTG 57.522 45.455 6.78 6.78 36.01 4.24
5354 10295 5.505181 TTTTCAGGTCTAGAATTCCAGCT 57.495 39.130 0.65 0.00 0.00 4.24
5355 10296 5.392487 GCTTTTTCAGGTCTAGAATTCCAGC 60.392 44.000 0.65 0.00 0.00 4.85
5356 10297 5.942826 AGCTTTTTCAGGTCTAGAATTCCAG 59.057 40.000 0.65 0.00 0.00 3.86
5357 10298 5.880901 AGCTTTTTCAGGTCTAGAATTCCA 58.119 37.500 0.65 0.00 0.00 3.53
5358 10299 7.554476 ACATAGCTTTTTCAGGTCTAGAATTCC 59.446 37.037 0.65 0.00 34.13 3.01
5359 10300 8.499403 ACATAGCTTTTTCAGGTCTAGAATTC 57.501 34.615 0.00 0.00 34.13 2.17
5360 10301 8.103305 TGACATAGCTTTTTCAGGTCTAGAATT 58.897 33.333 0.00 0.00 34.13 2.17
5361 10302 7.624549 TGACATAGCTTTTTCAGGTCTAGAAT 58.375 34.615 0.00 0.00 34.13 2.40
5362 10303 7.004555 TGACATAGCTTTTTCAGGTCTAGAA 57.995 36.000 0.00 0.00 34.13 2.10
5363 10304 6.437477 TCTGACATAGCTTTTTCAGGTCTAGA 59.563 38.462 16.98 7.86 36.84 2.43
5364 10305 6.634805 TCTGACATAGCTTTTTCAGGTCTAG 58.365 40.000 16.98 6.11 36.84 2.43
5365 10306 6.437477 TCTCTGACATAGCTTTTTCAGGTCTA 59.563 38.462 16.98 1.38 36.84 2.59
5366 10307 5.247110 TCTCTGACATAGCTTTTTCAGGTCT 59.753 40.000 16.98 0.00 36.84 3.85
5367 10308 5.482908 TCTCTGACATAGCTTTTTCAGGTC 58.517 41.667 16.98 5.99 36.84 3.85
5368 10309 5.489792 TCTCTGACATAGCTTTTTCAGGT 57.510 39.130 16.98 0.00 36.84 4.00
5369 10310 6.481644 GGTATCTCTGACATAGCTTTTTCAGG 59.518 42.308 16.98 10.01 36.84 3.86
5370 10311 7.271511 AGGTATCTCTGACATAGCTTTTTCAG 58.728 38.462 12.55 12.55 37.43 3.02
5371 10312 7.187824 AGGTATCTCTGACATAGCTTTTTCA 57.812 36.000 0.00 0.00 31.83 2.69
5372 10313 9.771534 AATAGGTATCTCTGACATAGCTTTTTC 57.228 33.333 9.40 0.00 36.29 2.29
5373 10314 9.771534 GAATAGGTATCTCTGACATAGCTTTTT 57.228 33.333 9.40 5.33 36.29 1.94
5374 10315 9.153479 AGAATAGGTATCTCTGACATAGCTTTT 57.847 33.333 9.40 8.23 36.29 2.27
5375 10316 8.584157 CAGAATAGGTATCTCTGACATAGCTTT 58.416 37.037 9.40 0.87 39.15 3.51
5376 10317 7.728083 ACAGAATAGGTATCTCTGACATAGCTT 59.272 37.037 9.40 0.00 39.15 3.74
5377 10318 7.237982 ACAGAATAGGTATCTCTGACATAGCT 58.762 38.462 9.15 9.15 39.15 3.32
5378 10319 7.461182 ACAGAATAGGTATCTCTGACATAGC 57.539 40.000 5.37 0.00 39.15 2.97
5379 10320 9.508642 TGTACAGAATAGGTATCTCTGACATAG 57.491 37.037 5.37 0.00 39.15 2.23
5381 10322 8.948401 ATGTACAGAATAGGTATCTCTGACAT 57.052 34.615 0.33 7.58 39.15 3.06
5382 10323 8.221251 AGATGTACAGAATAGGTATCTCTGACA 58.779 37.037 0.33 5.90 39.15 3.58
5383 10324 8.630054 AGATGTACAGAATAGGTATCTCTGAC 57.370 38.462 0.33 1.09 39.15 3.51
5384 10325 7.885922 GGAGATGTACAGAATAGGTATCTCTGA 59.114 40.741 13.95 0.00 39.15 3.27
5385 10326 7.667635 TGGAGATGTACAGAATAGGTATCTCTG 59.332 40.741 13.95 0.00 41.93 3.35
5386 10327 7.760607 TGGAGATGTACAGAATAGGTATCTCT 58.239 38.462 13.95 2.94 31.87 3.10
5387 10328 8.410673 TTGGAGATGTACAGAATAGGTATCTC 57.589 38.462 0.33 5.32 31.04 2.75
5388 10329 8.783660 TTTGGAGATGTACAGAATAGGTATCT 57.216 34.615 0.33 0.00 0.00 1.98
5389 10330 9.429359 CATTTGGAGATGTACAGAATAGGTATC 57.571 37.037 0.33 0.00 0.00 2.24
5390 10331 8.938883 ACATTTGGAGATGTACAGAATAGGTAT 58.061 33.333 0.33 0.00 38.43 2.73
5391 10332 8.319057 ACATTTGGAGATGTACAGAATAGGTA 57.681 34.615 0.33 0.00 38.43 3.08
5392 10333 7.200434 ACATTTGGAGATGTACAGAATAGGT 57.800 36.000 0.33 0.00 38.43 3.08


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.