Multiple sequence alignment - TraesCS6A01G106000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G106000 chr6A 100.000 3310 0 0 318 3627 74109128 74105819 0.000000e+00 6113.0
1 TraesCS6A01G106000 chr6A 98.519 135 1 1 3493 3626 577839669 577839535 1.680000e-58 237.0
2 TraesCS6A01G106000 chr6A 100.000 104 0 0 1 104 74109445 74109342 3.700000e-45 193.0
3 TraesCS6A01G106000 chr7D 91.347 1514 73 27 318 1791 101556964 101558459 0.000000e+00 2017.0
4 TraesCS6A01G106000 chr7D 92.384 1405 49 19 2151 3502 101558448 101559847 0.000000e+00 1949.0
5 TraesCS6A01G106000 chr7D 92.308 117 9 0 1202 1318 101557799 101557915 2.240000e-37 167.0
6 TraesCS6A01G106000 chr7D 95.146 103 3 2 1 103 101556810 101556910 1.040000e-35 161.0
7 TraesCS6A01G106000 chr7B 85.877 1494 113 42 318 1776 58716089 58717519 0.000000e+00 1500.0
8 TraesCS6A01G106000 chr7B 93.839 422 22 2 3078 3499 58720399 58720816 1.840000e-177 632.0
9 TraesCS6A01G106000 chr7B 97.275 367 9 1 1791 2156 48114852 48115218 3.980000e-174 621.0
10 TraesCS6A01G106000 chr7B 96.730 367 11 1 1791 2156 579488788 579488422 8.610000e-171 610.0
11 TraesCS6A01G106000 chr7B 86.833 281 29 4 2501 2780 58717826 58718099 1.270000e-79 307.0
12 TraesCS6A01G106000 chr7B 98.519 135 1 1 3494 3627 65668987 65669121 1.680000e-58 237.0
13 TraesCS6A01G106000 chr7B 88.194 144 14 3 2903 3044 97375033 97375175 6.230000e-38 169.0
14 TraesCS6A01G106000 chr7B 89.916 119 12 0 1199 1317 58716894 58717012 1.740000e-33 154.0
15 TraesCS6A01G106000 chr7B 79.612 103 19 1 3168 3268 58545254 58545356 5.020000e-09 73.1
16 TraesCS6A01G106000 chr7A 84.795 1026 77 35 319 1314 105243674 105244650 0.000000e+00 957.0
17 TraesCS6A01G106000 chr7A 89.846 650 57 6 1132 1775 105244513 105245159 0.000000e+00 826.0
18 TraesCS6A01G106000 chr7A 88.000 450 26 7 3078 3502 105264855 105265301 1.160000e-139 507.0
19 TraesCS6A01G106000 chr7A 87.087 333 25 11 2501 2826 105247384 105247705 9.570000e-96 361.0
20 TraesCS6A01G106000 chr7A 97.794 136 3 0 3492 3627 724225137 724225002 6.050000e-58 235.0
21 TraesCS6A01G106000 chr5B 97.011 368 10 1 1790 2156 446984662 446985029 5.150000e-173 617.0
22 TraesCS6A01G106000 chr5B 98.519 135 1 1 3493 3627 127860646 127860513 1.680000e-58 237.0
23 TraesCS6A01G106000 chr5B 85.976 164 17 4 2903 3062 216348872 216348711 1.730000e-38 171.0
24 TraesCS6A01G106000 chr5B 84.091 88 13 1 2820 2906 696611500 696611587 2.320000e-12 84.2
25 TraesCS6A01G106000 chr5A 97.003 367 10 1 1791 2156 548850036 548850402 1.850000e-172 616.0
26 TraesCS6A01G106000 chr5A 87.356 87 10 1 2820 2905 528368698 528368612 8.290000e-17 99.0
27 TraesCS6A01G106000 chr3A 97.003 367 10 1 1791 2156 140958008 140958374 1.850000e-172 616.0
28 TraesCS6A01G106000 chr3B 96.995 366 10 1 1792 2156 567172915 567172550 6.660000e-172 614.0
29 TraesCS6A01G106000 chr6B 96.739 368 10 2 1791 2156 584057371 584057004 2.390000e-171 612.0
30 TraesCS6A01G106000 chr6B 96.730 367 11 1 1791 2156 275927400 275927766 8.610000e-171 610.0
31 TraesCS6A01G106000 chr6B 97.101 138 3 1 3491 3627 646649020 646649157 7.830000e-57 231.0
32 TraesCS6A01G106000 chr4B 96.739 368 11 1 1790 2156 452699133 452699500 2.390000e-171 612.0
33 TraesCS6A01G106000 chr4B 97.794 136 3 0 3492 3627 664108290 664108425 6.050000e-58 235.0
34 TraesCS6A01G106000 chr1A 98.529 136 2 0 3492 3627 4557987 4558122 1.300000e-59 241.0
35 TraesCS6A01G106000 chr1A 85.714 161 17 4 2903 3059 407254118 407254276 8.060000e-37 165.0
36 TraesCS6A01G106000 chr4A 98.519 135 0 2 3493 3627 616146320 616146188 1.680000e-58 237.0
37 TraesCS6A01G106000 chr4A 97.778 135 3 0 3493 3627 618818217 618818083 2.180000e-57 233.0
38 TraesCS6A01G106000 chr6D 90.604 149 11 3 2903 3048 422936423 422936571 1.030000e-45 195.0
39 TraesCS6A01G106000 chr2B 88.356 146 14 3 2903 3046 172978981 172979125 4.810000e-39 172.0
40 TraesCS6A01G106000 chr2D 88.194 144 15 1 2903 3044 74951200 74951057 1.730000e-38 171.0
41 TraesCS6A01G106000 chr2D 88.276 145 12 4 2905 3045 547680226 547680369 6.230000e-38 169.0
42 TraesCS6A01G106000 chr3D 87.671 146 16 2 2903 3046 395050159 395050304 6.230000e-38 169.0
43 TraesCS6A01G106000 chr3D 84.615 91 10 3 2821 2907 593227316 593227226 1.790000e-13 87.9
44 TraesCS6A01G106000 chrUn 84.091 88 13 1 2820 2906 333321178 333321265 2.320000e-12 84.2
45 TraesCS6A01G106000 chrUn 84.091 88 13 1 2820 2906 363221951 363221864 2.320000e-12 84.2
46 TraesCS6A01G106000 chrUn 84.091 88 13 1 2820 2906 402875549 402875462 2.320000e-12 84.2
47 TraesCS6A01G106000 chrUn 84.091 88 13 1 2820 2906 452611230 452611143 2.320000e-12 84.2
48 TraesCS6A01G106000 chrUn 84.091 88 13 1 2820 2906 475148765 475148852 2.320000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G106000 chr6A 74105819 74109445 3626 True 3153.000000 6113 100.000000 1 3627 2 chr6A.!!$R2 3626
1 TraesCS6A01G106000 chr7D 101556810 101559847 3037 False 1073.500000 2017 92.796250 1 3502 4 chr7D.!!$F1 3501
2 TraesCS6A01G106000 chr7B 58716089 58720816 4727 False 648.250000 1500 89.116250 318 3499 4 chr7B.!!$F5 3181
3 TraesCS6A01G106000 chr7A 105243674 105247705 4031 False 714.666667 957 87.242667 319 2826 3 chr7A.!!$F2 2507

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
728 747 0.319900 CACTAGTGCGTGTCTTGCCT 60.32 55.0 10.54 0.0 0.0 4.75 F
1856 1953 0.250467 GGCAGCATCACGGATACCAT 60.25 55.0 0.00 0.0 0.0 3.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1964 2061 0.040425 GCTGTCGTTTGCGGACATTT 60.040 50.0 0.00 0.00 38.89 2.32 R
3583 7953 0.179073 ATTCCCCGCAAGATCTGACG 60.179 55.0 9.99 9.99 43.02 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.261037 CCTTTGTGTGTGTGTGTGTG 57.739 50.000 0.00 0.00 0.00 3.82
20 21 1.539388 CCTTTGTGTGTGTGTGTGTGT 59.461 47.619 0.00 0.00 0.00 3.72
21 22 2.414029 CCTTTGTGTGTGTGTGTGTGTC 60.414 50.000 0.00 0.00 0.00 3.67
54 55 8.338259 GGTTGTATGCATCTTAGTTATTCACAG 58.662 37.037 0.19 0.00 0.00 3.66
56 57 6.992123 TGTATGCATCTTAGTTATTCACAGGG 59.008 38.462 0.19 0.00 0.00 4.45
427 428 4.518970 CCATACTCTACTCAGCTCTTCCTC 59.481 50.000 0.00 0.00 0.00 3.71
436 437 6.260700 ACTCAGCTCTTCCTCTATCTTCTA 57.739 41.667 0.00 0.00 0.00 2.10
442 443 5.418840 GCTCTTCCTCTATCTTCTAGATGGG 59.581 48.000 5.84 0.00 35.37 4.00
443 444 6.749772 GCTCTTCCTCTATCTTCTAGATGGGA 60.750 46.154 5.84 1.95 35.37 4.37
447 457 8.805145 TTCCTCTATCTTCTAGATGGGATTTT 57.195 34.615 5.84 0.00 35.37 1.82
556 575 3.794475 GCAGCAATGATACAAGGCATCAC 60.794 47.826 0.00 0.00 35.33 3.06
721 740 2.030562 GGTGCCACTAGTGCGTGT 59.969 61.111 17.86 0.00 33.07 4.49
728 747 0.319900 CACTAGTGCGTGTCTTGCCT 60.320 55.000 10.54 0.00 0.00 4.75
729 748 0.393077 ACTAGTGCGTGTCTTGCCTT 59.607 50.000 0.00 0.00 0.00 4.35
730 749 1.202651 ACTAGTGCGTGTCTTGCCTTT 60.203 47.619 0.00 0.00 0.00 3.11
825 846 1.547372 GTCTACGTGCCCAACTCCTAA 59.453 52.381 0.00 0.00 0.00 2.69
856 877 3.324846 TGGTAGTGAGTGAAGCAGTGATT 59.675 43.478 0.00 0.00 0.00 2.57
881 908 1.942657 TCCATCAGCGAGCATAAAAGC 59.057 47.619 0.00 0.00 0.00 3.51
1040 1075 5.759763 CCATTAGTTCATCCGACATGAATCA 59.240 40.000 11.51 0.00 39.80 2.57
1061 1098 1.209747 GTTCCTTCCTCGGCACCTTAT 59.790 52.381 0.00 0.00 0.00 1.73
1062 1099 1.580059 TCCTTCCTCGGCACCTTATT 58.420 50.000 0.00 0.00 0.00 1.40
1099 1136 2.747446 CGGTCCTTCGATTTGGTTTGAT 59.253 45.455 0.00 0.00 0.00 2.57
1111 1148 6.033831 CGATTTGGTTTGATTGGATTTCGAAG 59.966 38.462 0.00 0.00 0.00 3.79
1169 1206 1.301479 GTGGTGAAGACGGTGGACC 60.301 63.158 0.00 0.00 0.00 4.46
1333 1424 3.535962 GCGAGGGAGCTCCAGGAG 61.536 72.222 33.29 21.05 38.24 3.69
1432 1523 1.135460 GTCCCCTACTTCTTCGTCACG 60.135 57.143 0.00 0.00 0.00 4.35
1455 1546 3.976701 AAGGCATGCCGCGCTAACT 62.977 57.895 30.50 8.15 43.84 2.24
1466 1557 2.034812 CCGCGCTAACTAATCTCCTCTT 59.965 50.000 5.56 0.00 0.00 2.85
1472 1563 6.584563 GCGCTAACTAATCTCCTCTTCTATTG 59.415 42.308 0.00 0.00 0.00 1.90
1478 1570 9.445973 AACTAATCTCCTCTTCTATTGATCCTT 57.554 33.333 0.00 0.00 0.00 3.36
1483 1575 6.551601 TCTCCTCTTCTATTGATCCTTACACC 59.448 42.308 0.00 0.00 0.00 4.16
1485 1577 4.945246 TCTTCTATTGATCCTTACACCGC 58.055 43.478 0.00 0.00 0.00 5.68
1501 1593 0.320683 CCGCCGCCATCATAGATTCA 60.321 55.000 0.00 0.00 0.00 2.57
1507 1599 2.994578 CGCCATCATAGATTCAGCTCTG 59.005 50.000 0.00 0.00 0.00 3.35
1514 1611 6.647334 TCATAGATTCAGCTCTGTCCTTAG 57.353 41.667 0.00 0.00 0.00 2.18
1518 1615 0.898320 TCAGCTCTGTCCTTAGGCAC 59.102 55.000 0.00 0.00 0.00 5.01
1536 1633 3.433173 GGCACCAATTAACCTCCGTCTAT 60.433 47.826 0.00 0.00 0.00 1.98
1567 1664 4.275689 CCATGCATGTATGTGGACGTTTAT 59.724 41.667 24.58 0.00 33.53 1.40
1789 1886 2.165641 CGTCCTTCCATGTAGCTGTACA 59.834 50.000 0.00 0.00 43.43 2.90
1791 1888 4.680708 CGTCCTTCCATGTAGCTGTACATT 60.681 45.833 0.00 0.00 45.99 2.71
1792 1889 5.186198 GTCCTTCCATGTAGCTGTACATTT 58.814 41.667 0.00 0.00 45.99 2.32
1793 1890 5.648092 GTCCTTCCATGTAGCTGTACATTTT 59.352 40.000 0.00 0.00 45.99 1.82
1794 1891 6.151144 GTCCTTCCATGTAGCTGTACATTTTT 59.849 38.462 0.00 0.00 45.99 1.94
1812 1909 4.600692 TTTTTAGAGAAAAGGGCAAGGC 57.399 40.909 0.00 0.00 35.96 4.35
1813 1910 2.897326 TTTTAGAGAAAAGGGCAAGGCC 59.103 45.455 4.20 4.20 37.53 5.19
1822 1919 4.657952 GGCAAGGCCCGACTTTAT 57.342 55.556 0.00 0.00 44.06 1.40
1823 1920 3.792712 GGCAAGGCCCGACTTTATA 57.207 52.632 0.00 0.00 44.06 0.98
1824 1921 1.594331 GGCAAGGCCCGACTTTATAG 58.406 55.000 0.00 0.00 44.06 1.31
1825 1922 1.140252 GGCAAGGCCCGACTTTATAGA 59.860 52.381 0.00 0.00 44.06 1.98
1826 1923 2.224548 GGCAAGGCCCGACTTTATAGAT 60.225 50.000 0.00 0.00 44.06 1.98
1827 1924 3.007614 GGCAAGGCCCGACTTTATAGATA 59.992 47.826 0.00 0.00 44.06 1.98
1828 1925 4.504340 GGCAAGGCCCGACTTTATAGATAA 60.504 45.833 0.00 0.00 44.06 1.75
1829 1926 5.061179 GCAAGGCCCGACTTTATAGATAAA 58.939 41.667 0.00 0.00 0.00 1.40
1830 1927 7.730663 GGCAAGGCCCGACTTTATAGATAAAG 61.731 46.154 16.88 16.88 46.29 1.85
1848 1945 3.129502 CCACCAGGCAGCATCACG 61.130 66.667 0.00 0.00 0.00 4.35
1849 1946 3.129502 CACCAGGCAGCATCACGG 61.130 66.667 0.00 0.00 0.00 4.94
1850 1947 3.321648 ACCAGGCAGCATCACGGA 61.322 61.111 0.00 0.00 0.00 4.69
1851 1948 2.191375 CCAGGCAGCATCACGGAT 59.809 61.111 0.00 0.00 0.00 4.18
1852 1949 1.337384 ACCAGGCAGCATCACGGATA 61.337 55.000 0.00 0.00 0.00 2.59
1853 1950 0.882042 CCAGGCAGCATCACGGATAC 60.882 60.000 0.00 0.00 0.00 2.24
1854 1951 0.882042 CAGGCAGCATCACGGATACC 60.882 60.000 0.00 0.00 0.00 2.73
1855 1952 1.146041 GGCAGCATCACGGATACCA 59.854 57.895 0.00 0.00 0.00 3.25
1856 1953 0.250467 GGCAGCATCACGGATACCAT 60.250 55.000 0.00 0.00 0.00 3.55
1857 1954 1.001974 GGCAGCATCACGGATACCATA 59.998 52.381 0.00 0.00 0.00 2.74
1858 1955 2.341257 GCAGCATCACGGATACCATAG 58.659 52.381 0.00 0.00 0.00 2.23
1859 1956 2.932622 GCAGCATCACGGATACCATAGG 60.933 54.545 0.00 0.00 0.00 2.57
1860 1957 2.300152 CAGCATCACGGATACCATAGGT 59.700 50.000 0.00 0.00 40.16 3.08
1861 1958 2.972713 AGCATCACGGATACCATAGGTT 59.027 45.455 0.00 0.00 37.09 3.50
1862 1959 3.006967 AGCATCACGGATACCATAGGTTC 59.993 47.826 0.00 0.00 37.09 3.62
1863 1960 3.244078 GCATCACGGATACCATAGGTTCA 60.244 47.826 0.00 0.00 37.09 3.18
1864 1961 4.307432 CATCACGGATACCATAGGTTCAC 58.693 47.826 0.00 0.00 37.09 3.18
1865 1962 3.367321 TCACGGATACCATAGGTTCACA 58.633 45.455 0.00 0.00 37.09 3.58
1866 1963 3.383505 TCACGGATACCATAGGTTCACAG 59.616 47.826 0.00 0.00 37.09 3.66
1867 1964 2.698797 ACGGATACCATAGGTTCACAGG 59.301 50.000 0.00 0.00 37.09 4.00
1868 1965 2.963101 CGGATACCATAGGTTCACAGGA 59.037 50.000 0.00 0.00 37.09 3.86
1869 1966 3.386726 CGGATACCATAGGTTCACAGGAA 59.613 47.826 0.00 0.00 37.09 3.36
1870 1967 4.141801 CGGATACCATAGGTTCACAGGAAA 60.142 45.833 0.00 0.00 37.09 3.13
1871 1968 5.628200 CGGATACCATAGGTTCACAGGAAAA 60.628 44.000 0.00 0.00 37.09 2.29
1872 1969 5.589050 GGATACCATAGGTTCACAGGAAAAC 59.411 44.000 0.00 0.00 37.09 2.43
1873 1970 4.447138 ACCATAGGTTCACAGGAAAACA 57.553 40.909 0.00 0.00 34.13 2.83
1874 1971 4.998051 ACCATAGGTTCACAGGAAAACAT 58.002 39.130 0.00 0.00 34.13 2.71
1875 1972 6.134535 ACCATAGGTTCACAGGAAAACATA 57.865 37.500 0.00 0.00 34.13 2.29
1876 1973 6.548321 ACCATAGGTTCACAGGAAAACATAA 58.452 36.000 0.00 0.00 34.13 1.90
1877 1974 6.433093 ACCATAGGTTCACAGGAAAACATAAC 59.567 38.462 0.00 0.00 34.13 1.89
1878 1975 6.127730 CCATAGGTTCACAGGAAAACATAACC 60.128 42.308 0.00 0.00 34.13 2.85
1879 1976 4.798882 AGGTTCACAGGAAAACATAACCA 58.201 39.130 0.00 0.00 37.86 3.67
1880 1977 4.583073 AGGTTCACAGGAAAACATAACCAC 59.417 41.667 0.00 0.00 37.86 4.16
1881 1978 4.339814 GGTTCACAGGAAAACATAACCACA 59.660 41.667 0.00 0.00 35.93 4.17
1882 1979 5.278604 GTTCACAGGAAAACATAACCACAC 58.721 41.667 0.00 0.00 34.13 3.82
1883 1980 4.527944 TCACAGGAAAACATAACCACACA 58.472 39.130 0.00 0.00 0.00 3.72
1884 1981 4.578516 TCACAGGAAAACATAACCACACAG 59.421 41.667 0.00 0.00 0.00 3.66
1885 1982 4.578516 CACAGGAAAACATAACCACACAGA 59.421 41.667 0.00 0.00 0.00 3.41
1886 1983 4.821805 ACAGGAAAACATAACCACACAGAG 59.178 41.667 0.00 0.00 0.00 3.35
1887 1984 4.216257 CAGGAAAACATAACCACACAGAGG 59.784 45.833 0.00 0.00 0.00 3.69
1888 1985 4.104102 AGGAAAACATAACCACACAGAGGA 59.896 41.667 0.00 0.00 0.00 3.71
1889 1986 4.455877 GGAAAACATAACCACACAGAGGAG 59.544 45.833 0.00 0.00 0.00 3.69
1890 1987 4.706842 AAACATAACCACACAGAGGAGT 57.293 40.909 0.00 0.00 0.00 3.85
1891 1988 4.706842 AACATAACCACACAGAGGAGTT 57.293 40.909 0.00 0.00 0.00 3.01
1892 1989 4.706842 ACATAACCACACAGAGGAGTTT 57.293 40.909 0.00 0.00 0.00 2.66
1893 1990 5.818678 ACATAACCACACAGAGGAGTTTA 57.181 39.130 0.00 0.00 0.00 2.01
1894 1991 6.182507 ACATAACCACACAGAGGAGTTTAA 57.817 37.500 0.00 0.00 0.00 1.52
1895 1992 6.231211 ACATAACCACACAGAGGAGTTTAAG 58.769 40.000 0.00 0.00 0.00 1.85
1896 1993 6.042781 ACATAACCACACAGAGGAGTTTAAGA 59.957 38.462 0.00 0.00 0.00 2.10
1897 1994 5.367945 AACCACACAGAGGAGTTTAAGAA 57.632 39.130 0.00 0.00 0.00 2.52
1898 1995 5.367945 ACCACACAGAGGAGTTTAAGAAA 57.632 39.130 0.00 0.00 0.00 2.52
1899 1996 5.751586 ACCACACAGAGGAGTTTAAGAAAA 58.248 37.500 0.00 0.00 0.00 2.29
1900 1997 6.184789 ACCACACAGAGGAGTTTAAGAAAAA 58.815 36.000 0.00 0.00 0.00 1.94
1901 1998 6.095021 ACCACACAGAGGAGTTTAAGAAAAAC 59.905 38.462 0.00 0.00 0.00 2.43
1902 1999 6.459710 CCACACAGAGGAGTTTAAGAAAAACC 60.460 42.308 0.00 0.00 0.00 3.27
1903 2000 6.318900 CACACAGAGGAGTTTAAGAAAAACCT 59.681 38.462 0.00 0.00 36.78 3.50
1904 2001 7.497909 CACACAGAGGAGTTTAAGAAAAACCTA 59.502 37.037 0.00 0.00 35.29 3.08
1905 2002 8.050930 ACACAGAGGAGTTTAAGAAAAACCTAA 58.949 33.333 0.00 0.00 35.29 2.69
1906 2003 8.560374 CACAGAGGAGTTTAAGAAAAACCTAAG 58.440 37.037 0.00 0.00 35.29 2.18
1907 2004 7.228906 ACAGAGGAGTTTAAGAAAAACCTAAGC 59.771 37.037 0.00 0.00 35.29 3.09
1908 2005 7.228706 CAGAGGAGTTTAAGAAAAACCTAAGCA 59.771 37.037 0.00 0.00 35.29 3.91
1909 2006 7.778382 AGAGGAGTTTAAGAAAAACCTAAGCAA 59.222 33.333 0.00 0.00 35.29 3.91
1910 2007 7.941919 AGGAGTTTAAGAAAAACCTAAGCAAG 58.058 34.615 0.00 0.00 34.19 4.01
1911 2008 6.641314 GGAGTTTAAGAAAAACCTAAGCAAGC 59.359 38.462 0.00 0.00 0.00 4.01
1912 2009 7.107639 AGTTTAAGAAAAACCTAAGCAAGCA 57.892 32.000 0.00 0.00 0.00 3.91
1913 2010 7.726216 AGTTTAAGAAAAACCTAAGCAAGCAT 58.274 30.769 0.00 0.00 0.00 3.79
1914 2011 7.653311 AGTTTAAGAAAAACCTAAGCAAGCATG 59.347 33.333 0.00 0.00 0.00 4.06
1915 2012 5.789643 AAGAAAAACCTAAGCAAGCATGA 57.210 34.783 0.00 0.00 0.00 3.07
1916 2013 5.990120 AGAAAAACCTAAGCAAGCATGAT 57.010 34.783 0.00 0.00 0.00 2.45
1917 2014 7.466746 AAGAAAAACCTAAGCAAGCATGATA 57.533 32.000 0.00 0.00 0.00 2.15
1918 2015 6.856895 AGAAAAACCTAAGCAAGCATGATAC 58.143 36.000 0.00 0.00 0.00 2.24
1919 2016 6.434028 AGAAAAACCTAAGCAAGCATGATACA 59.566 34.615 0.00 0.00 0.00 2.29
1920 2017 5.824904 AAACCTAAGCAAGCATGATACAG 57.175 39.130 0.00 0.00 0.00 2.74
1921 2018 3.813443 ACCTAAGCAAGCATGATACAGG 58.187 45.455 0.00 6.29 34.85 4.00
1922 2019 2.551459 CCTAAGCAAGCATGATACAGGC 59.449 50.000 0.00 0.09 41.74 4.85
1923 2020 2.133281 AAGCAAGCATGATACAGGCA 57.867 45.000 10.71 0.00 43.99 4.75
1924 2021 2.133281 AGCAAGCATGATACAGGCAA 57.867 45.000 10.71 0.00 43.99 4.52
1925 2022 1.747355 AGCAAGCATGATACAGGCAAC 59.253 47.619 10.71 0.31 43.99 4.17
1938 2035 2.431942 GCAACTGCCATGCACAGC 60.432 61.111 12.46 2.85 43.29 4.40
1939 2036 2.126618 CAACTGCCATGCACAGCG 60.127 61.111 12.46 2.29 38.79 5.18
1940 2037 4.047059 AACTGCCATGCACAGCGC 62.047 61.111 12.46 0.00 38.79 5.92
1959 2056 3.009115 CAGGCCGGGGAGGAGAAA 61.009 66.667 2.18 0.00 45.00 2.52
1960 2057 2.689034 AGGCCGGGGAGGAGAAAG 60.689 66.667 2.18 0.00 45.00 2.62
1961 2058 2.687566 GGCCGGGGAGGAGAAAGA 60.688 66.667 2.18 0.00 45.00 2.52
1962 2059 2.585153 GCCGGGGAGGAGAAAGAC 59.415 66.667 2.18 0.00 45.00 3.01
1963 2060 3.032667 GCCGGGGAGGAGAAAGACC 62.033 68.421 2.18 0.00 45.00 3.85
1964 2061 1.612442 CCGGGGAGGAGAAAGACCA 60.612 63.158 0.00 0.00 45.00 4.02
1965 2062 1.198759 CCGGGGAGGAGAAAGACCAA 61.199 60.000 0.00 0.00 45.00 3.67
1966 2063 0.690762 CGGGGAGGAGAAAGACCAAA 59.309 55.000 0.00 0.00 0.00 3.28
1967 2064 1.282157 CGGGGAGGAGAAAGACCAAAT 59.718 52.381 0.00 0.00 0.00 2.32
1968 2065 2.728007 GGGGAGGAGAAAGACCAAATG 58.272 52.381 0.00 0.00 0.00 2.32
1969 2066 2.041755 GGGGAGGAGAAAGACCAAATGT 59.958 50.000 0.00 0.00 0.00 2.71
1970 2067 3.348119 GGGAGGAGAAAGACCAAATGTC 58.652 50.000 0.00 0.00 44.82 3.06
1971 2068 3.348119 GGAGGAGAAAGACCAAATGTCC 58.652 50.000 0.00 0.00 45.68 4.02
1972 2069 3.003480 GAGGAGAAAGACCAAATGTCCG 58.997 50.000 0.00 0.00 45.68 4.79
1973 2070 1.468914 GGAGAAAGACCAAATGTCCGC 59.531 52.381 0.00 0.00 45.68 5.54
1974 2071 2.151202 GAGAAAGACCAAATGTCCGCA 58.849 47.619 0.00 0.00 45.68 5.69
1975 2072 2.552315 GAGAAAGACCAAATGTCCGCAA 59.448 45.455 0.00 0.00 45.68 4.85
1976 2073 2.955660 AGAAAGACCAAATGTCCGCAAA 59.044 40.909 0.00 0.00 45.68 3.68
1977 2074 2.793278 AAGACCAAATGTCCGCAAAC 57.207 45.000 0.00 0.00 45.68 2.93
1978 2075 0.591170 AGACCAAATGTCCGCAAACG 59.409 50.000 0.00 0.00 45.68 3.60
1979 2076 0.589223 GACCAAATGTCCGCAAACGA 59.411 50.000 0.00 0.00 38.09 3.85
1980 2077 0.309612 ACCAAATGTCCGCAAACGAC 59.690 50.000 0.00 0.00 43.93 4.34
1981 2078 0.309302 CCAAATGTCCGCAAACGACA 59.691 50.000 0.00 0.00 43.93 4.35
1982 2079 1.662876 CCAAATGTCCGCAAACGACAG 60.663 52.381 0.00 0.00 43.93 3.51
1983 2080 0.040425 AAATGTCCGCAAACGACAGC 60.040 50.000 0.00 0.00 43.93 4.40
1984 2081 1.163420 AATGTCCGCAAACGACAGCA 61.163 50.000 0.00 0.00 43.93 4.41
1985 2082 1.841663 ATGTCCGCAAACGACAGCAC 61.842 55.000 0.00 0.00 43.93 4.40
1986 2083 2.970324 TCCGCAAACGACAGCACC 60.970 61.111 0.00 0.00 43.93 5.01
1987 2084 3.276091 CCGCAAACGACAGCACCA 61.276 61.111 0.00 0.00 43.93 4.17
1988 2085 2.712539 CGCAAACGACAGCACCAA 59.287 55.556 0.00 0.00 43.93 3.67
1989 2086 1.063327 CGCAAACGACAGCACCAAA 59.937 52.632 0.00 0.00 43.93 3.28
1990 2087 0.317770 CGCAAACGACAGCACCAAAT 60.318 50.000 0.00 0.00 43.93 2.32
1991 2088 1.851658 GCAAACGACAGCACCAAATT 58.148 45.000 0.00 0.00 0.00 1.82
1992 2089 2.603412 CGCAAACGACAGCACCAAATTA 60.603 45.455 0.00 0.00 43.93 1.40
1993 2090 3.574614 GCAAACGACAGCACCAAATTAT 58.425 40.909 0.00 0.00 0.00 1.28
1994 2091 4.670478 CGCAAACGACAGCACCAAATTATA 60.670 41.667 0.00 0.00 43.93 0.98
1995 2092 4.557301 GCAAACGACAGCACCAAATTATAC 59.443 41.667 0.00 0.00 0.00 1.47
1996 2093 4.593597 AACGACAGCACCAAATTATACG 57.406 40.909 0.00 0.00 0.00 3.06
1997 2094 2.933906 ACGACAGCACCAAATTATACGG 59.066 45.455 0.00 0.00 0.00 4.02
1998 2095 2.286184 CGACAGCACCAAATTATACGGC 60.286 50.000 0.00 0.00 0.00 5.68
1999 2096 2.680841 GACAGCACCAAATTATACGGCA 59.319 45.455 0.00 0.00 0.00 5.69
2000 2097 2.682856 ACAGCACCAAATTATACGGCAG 59.317 45.455 0.00 0.00 0.00 4.85
2001 2098 2.033299 CAGCACCAAATTATACGGCAGG 59.967 50.000 0.00 0.00 0.00 4.85
2002 2099 1.336755 GCACCAAATTATACGGCAGGG 59.663 52.381 0.00 0.00 0.00 4.45
2003 2100 2.650322 CACCAAATTATACGGCAGGGT 58.350 47.619 0.00 0.00 0.00 4.34
2004 2101 3.020984 CACCAAATTATACGGCAGGGTT 58.979 45.455 0.00 0.00 0.00 4.11
2005 2102 3.066203 CACCAAATTATACGGCAGGGTTC 59.934 47.826 0.00 0.00 0.00 3.62
2006 2103 2.289547 CCAAATTATACGGCAGGGTTCG 59.710 50.000 0.00 0.00 0.00 3.95
2007 2104 2.940410 CAAATTATACGGCAGGGTTCGT 59.060 45.455 0.00 0.00 42.55 3.85
2008 2105 2.521105 ATTATACGGCAGGGTTCGTC 57.479 50.000 0.00 0.00 40.31 4.20
2009 2106 0.461135 TTATACGGCAGGGTTCGTCC 59.539 55.000 0.00 0.00 40.31 4.79
2019 2116 3.888093 GGTTCGTCCCGGATATCTG 57.112 57.895 0.73 4.40 0.00 2.90
2020 2117 1.325355 GGTTCGTCCCGGATATCTGA 58.675 55.000 13.42 0.00 0.00 3.27
2021 2118 1.269998 GGTTCGTCCCGGATATCTGAG 59.730 57.143 13.42 0.00 0.00 3.35
2022 2119 2.228059 GTTCGTCCCGGATATCTGAGA 58.772 52.381 13.42 1.91 0.00 3.27
2023 2120 2.621998 GTTCGTCCCGGATATCTGAGAA 59.378 50.000 13.42 9.63 0.00 2.87
2024 2121 2.940158 TCGTCCCGGATATCTGAGAAA 58.060 47.619 13.42 0.00 0.00 2.52
2025 2122 3.497332 TCGTCCCGGATATCTGAGAAAT 58.503 45.455 13.42 0.00 0.00 2.17
2026 2123 3.506455 TCGTCCCGGATATCTGAGAAATC 59.494 47.826 13.42 0.00 0.00 2.17
2027 2124 3.670895 CGTCCCGGATATCTGAGAAATCG 60.671 52.174 13.42 1.93 0.00 3.34
2028 2125 3.506455 GTCCCGGATATCTGAGAAATCGA 59.494 47.826 13.42 0.00 0.00 3.59
2029 2126 4.022242 GTCCCGGATATCTGAGAAATCGAA 60.022 45.833 13.42 0.00 0.00 3.71
2030 2127 4.218635 TCCCGGATATCTGAGAAATCGAAG 59.781 45.833 13.42 0.00 0.00 3.79
2031 2128 3.923461 CCGGATATCTGAGAAATCGAAGC 59.077 47.826 13.42 0.00 0.00 3.86
2032 2129 3.923461 CGGATATCTGAGAAATCGAAGCC 59.077 47.826 5.54 0.00 0.00 4.35
2033 2130 4.249661 GGATATCTGAGAAATCGAAGCCC 58.750 47.826 2.05 0.00 0.00 5.19
2034 2131 2.231215 ATCTGAGAAATCGAAGCCCG 57.769 50.000 0.00 0.00 40.25 6.13
2044 2141 2.697431 TCGAAGCCCGAATTTTGTTG 57.303 45.000 0.00 0.00 45.43 3.33
2045 2142 2.222886 TCGAAGCCCGAATTTTGTTGA 58.777 42.857 0.00 0.00 45.43 3.18
2046 2143 2.817258 TCGAAGCCCGAATTTTGTTGAT 59.183 40.909 0.00 0.00 45.43 2.57
2047 2144 2.916716 CGAAGCCCGAATTTTGTTGATG 59.083 45.455 0.00 0.00 41.76 3.07
2048 2145 3.365868 CGAAGCCCGAATTTTGTTGATGA 60.366 43.478 0.00 0.00 41.76 2.92
2049 2146 3.855689 AGCCCGAATTTTGTTGATGAG 57.144 42.857 0.00 0.00 0.00 2.90
2050 2147 2.094545 AGCCCGAATTTTGTTGATGAGC 60.095 45.455 0.00 0.00 0.00 4.26
2051 2148 2.352617 GCCCGAATTTTGTTGATGAGCA 60.353 45.455 0.00 0.00 0.00 4.26
2052 2149 3.504863 CCCGAATTTTGTTGATGAGCAG 58.495 45.455 0.00 0.00 0.00 4.24
2053 2150 3.504863 CCGAATTTTGTTGATGAGCAGG 58.495 45.455 0.00 0.00 0.00 4.85
2054 2151 3.057315 CCGAATTTTGTTGATGAGCAGGT 60.057 43.478 0.00 0.00 0.00 4.00
2055 2152 4.161333 CGAATTTTGTTGATGAGCAGGTC 58.839 43.478 0.00 0.00 0.00 3.85
2056 2153 4.488879 GAATTTTGTTGATGAGCAGGTCC 58.511 43.478 0.00 0.00 0.00 4.46
2057 2154 2.655090 TTTGTTGATGAGCAGGTCCA 57.345 45.000 0.00 0.00 0.00 4.02
2058 2155 2.189594 TTGTTGATGAGCAGGTCCAG 57.810 50.000 0.00 0.00 0.00 3.86
2059 2156 0.325933 TGTTGATGAGCAGGTCCAGG 59.674 55.000 0.00 0.00 0.00 4.45
2060 2157 0.393537 GTTGATGAGCAGGTCCAGGG 60.394 60.000 0.00 0.00 0.00 4.45
2061 2158 2.191641 GATGAGCAGGTCCAGGGC 59.808 66.667 0.00 0.00 0.00 5.19
2062 2159 2.611800 ATGAGCAGGTCCAGGGCA 60.612 61.111 0.00 0.00 0.00 5.36
2063 2160 1.992519 GATGAGCAGGTCCAGGGCAT 61.993 60.000 0.00 0.00 0.00 4.40
2064 2161 1.992519 ATGAGCAGGTCCAGGGCATC 61.993 60.000 0.00 0.00 0.00 3.91
2065 2162 3.412624 GAGCAGGTCCAGGGCATCC 62.413 68.421 0.00 0.00 0.00 3.51
2066 2163 4.512914 GCAGGTCCAGGGCATCCC 62.513 72.222 0.00 0.00 45.90 3.85
2075 2172 3.564218 GGGCATCCCGATCAGGCT 61.564 66.667 0.00 0.00 39.21 4.58
2076 2173 2.031768 GGCATCCCGATCAGGCTC 59.968 66.667 0.00 0.00 39.21 4.70
2077 2174 2.031768 GCATCCCGATCAGGCTCC 59.968 66.667 0.00 0.00 39.21 4.70
2078 2175 2.515071 GCATCCCGATCAGGCTCCT 61.515 63.158 0.00 0.00 39.21 3.69
2079 2176 2.049627 GCATCCCGATCAGGCTCCTT 62.050 60.000 0.00 0.00 39.21 3.36
2080 2177 1.342074 CATCCCGATCAGGCTCCTTA 58.658 55.000 0.00 0.00 39.21 2.69
2081 2178 1.274728 CATCCCGATCAGGCTCCTTAG 59.725 57.143 0.00 0.00 39.21 2.18
2082 2179 0.261991 TCCCGATCAGGCTCCTTAGT 59.738 55.000 0.00 0.00 39.21 2.24
2083 2180 0.676736 CCCGATCAGGCTCCTTAGTC 59.323 60.000 0.00 0.00 39.21 2.59
2084 2181 1.403814 CCGATCAGGCTCCTTAGTCA 58.596 55.000 0.00 0.00 0.00 3.41
2085 2182 1.757118 CCGATCAGGCTCCTTAGTCAA 59.243 52.381 0.00 0.00 0.00 3.18
2086 2183 2.366916 CCGATCAGGCTCCTTAGTCAAT 59.633 50.000 0.00 0.00 0.00 2.57
2087 2184 3.388308 CGATCAGGCTCCTTAGTCAATG 58.612 50.000 0.00 0.00 0.00 2.82
2088 2185 3.068732 CGATCAGGCTCCTTAGTCAATGA 59.931 47.826 0.00 0.00 0.00 2.57
2089 2186 4.262377 CGATCAGGCTCCTTAGTCAATGAT 60.262 45.833 0.00 0.00 0.00 2.45
2090 2187 4.679373 TCAGGCTCCTTAGTCAATGATC 57.321 45.455 0.00 0.00 0.00 2.92
2091 2188 4.293494 TCAGGCTCCTTAGTCAATGATCT 58.707 43.478 0.00 0.00 0.00 2.75
2092 2189 4.343526 TCAGGCTCCTTAGTCAATGATCTC 59.656 45.833 0.00 0.00 0.00 2.75
2093 2190 3.645687 AGGCTCCTTAGTCAATGATCTCC 59.354 47.826 0.00 0.00 0.00 3.71
2094 2191 3.389329 GGCTCCTTAGTCAATGATCTCCA 59.611 47.826 0.00 0.00 0.00 3.86
2095 2192 4.376146 GCTCCTTAGTCAATGATCTCCAC 58.624 47.826 0.00 0.00 0.00 4.02
2096 2193 4.100808 GCTCCTTAGTCAATGATCTCCACT 59.899 45.833 0.00 0.00 0.00 4.00
2097 2194 5.599732 CTCCTTAGTCAATGATCTCCACTG 58.400 45.833 0.00 0.00 0.00 3.66
2098 2195 4.125703 CCTTAGTCAATGATCTCCACTGC 58.874 47.826 0.00 0.00 0.00 4.40
2099 2196 4.141756 CCTTAGTCAATGATCTCCACTGCT 60.142 45.833 0.00 0.00 0.00 4.24
2100 2197 3.263489 AGTCAATGATCTCCACTGCTG 57.737 47.619 0.00 0.00 0.00 4.41
2101 2198 1.669779 GTCAATGATCTCCACTGCTGC 59.330 52.381 0.00 0.00 0.00 5.25
2102 2199 1.279846 TCAATGATCTCCACTGCTGCA 59.720 47.619 0.88 0.88 0.00 4.41
2103 2200 2.089201 CAATGATCTCCACTGCTGCAA 58.911 47.619 3.02 0.00 0.00 4.08
2104 2201 2.039818 ATGATCTCCACTGCTGCAAG 57.960 50.000 3.02 0.00 0.00 4.01
2105 2202 0.978907 TGATCTCCACTGCTGCAAGA 59.021 50.000 3.02 3.83 34.07 3.02
2106 2203 1.348696 TGATCTCCACTGCTGCAAGAA 59.651 47.619 3.02 0.00 34.07 2.52
2107 2204 2.026542 TGATCTCCACTGCTGCAAGAAT 60.027 45.455 3.02 0.00 34.07 2.40
2108 2205 3.198417 TGATCTCCACTGCTGCAAGAATA 59.802 43.478 3.02 0.00 34.07 1.75
2109 2206 3.920231 TCTCCACTGCTGCAAGAATAT 57.080 42.857 3.02 0.00 34.07 1.28
2110 2207 5.070847 TGATCTCCACTGCTGCAAGAATATA 59.929 40.000 3.02 0.00 34.07 0.86
2111 2208 4.697514 TCTCCACTGCTGCAAGAATATAC 58.302 43.478 3.02 0.00 34.07 1.47
2112 2209 4.162131 TCTCCACTGCTGCAAGAATATACA 59.838 41.667 3.02 0.00 34.07 2.29
2113 2210 5.039920 TCCACTGCTGCAAGAATATACAT 57.960 39.130 3.02 0.00 34.07 2.29
2114 2211 4.818005 TCCACTGCTGCAAGAATATACATG 59.182 41.667 3.02 0.00 34.07 3.21
2115 2212 4.818005 CCACTGCTGCAAGAATATACATGA 59.182 41.667 3.02 0.00 34.07 3.07
2116 2213 5.472478 CCACTGCTGCAAGAATATACATGAT 59.528 40.000 3.02 0.00 34.07 2.45
2117 2214 6.016527 CCACTGCTGCAAGAATATACATGATT 60.017 38.462 3.02 0.00 34.07 2.57
2118 2215 7.423199 CACTGCTGCAAGAATATACATGATTT 58.577 34.615 3.02 0.00 34.07 2.17
2119 2216 7.378728 CACTGCTGCAAGAATATACATGATTTG 59.621 37.037 3.02 0.00 34.07 2.32
2120 2217 7.283807 ACTGCTGCAAGAATATACATGATTTGA 59.716 33.333 3.02 0.00 34.07 2.69
2121 2218 7.998580 TGCTGCAAGAATATACATGATTTGAA 58.001 30.769 0.00 0.00 34.07 2.69
2122 2219 8.635328 TGCTGCAAGAATATACATGATTTGAAT 58.365 29.630 0.00 0.00 34.07 2.57
2134 2231 7.634671 ACATGATTTGAATAGAACATCAGCA 57.365 32.000 0.00 0.00 0.00 4.41
2135 2232 7.704271 ACATGATTTGAATAGAACATCAGCAG 58.296 34.615 0.00 0.00 0.00 4.24
2136 2233 6.688637 TGATTTGAATAGAACATCAGCAGG 57.311 37.500 0.00 0.00 0.00 4.85
2137 2234 6.182627 TGATTTGAATAGAACATCAGCAGGT 58.817 36.000 0.00 0.00 0.00 4.00
2138 2235 6.660521 TGATTTGAATAGAACATCAGCAGGTT 59.339 34.615 0.00 0.00 0.00 3.50
2139 2236 6.899393 TTTGAATAGAACATCAGCAGGTTT 57.101 33.333 0.00 0.00 0.00 3.27
2140 2237 7.994425 TTTGAATAGAACATCAGCAGGTTTA 57.006 32.000 0.00 0.00 0.00 2.01
2141 2238 7.615582 TTGAATAGAACATCAGCAGGTTTAG 57.384 36.000 0.00 0.00 0.00 1.85
2142 2239 6.946340 TGAATAGAACATCAGCAGGTTTAGA 58.054 36.000 0.00 0.00 0.00 2.10
2143 2240 7.568349 TGAATAGAACATCAGCAGGTTTAGAT 58.432 34.615 0.00 0.00 0.00 1.98
2144 2241 7.496920 TGAATAGAACATCAGCAGGTTTAGATG 59.503 37.037 0.00 0.00 42.61 2.90
2145 2242 4.521146 AGAACATCAGCAGGTTTAGATGG 58.479 43.478 0.00 0.00 41.55 3.51
2146 2243 3.287867 ACATCAGCAGGTTTAGATGGG 57.712 47.619 0.00 0.00 41.55 4.00
2147 2244 2.846206 ACATCAGCAGGTTTAGATGGGA 59.154 45.455 0.00 0.00 41.55 4.37
2148 2245 3.266772 ACATCAGCAGGTTTAGATGGGAA 59.733 43.478 0.00 0.00 41.55 3.97
2149 2246 3.634397 TCAGCAGGTTTAGATGGGAAG 57.366 47.619 0.00 0.00 0.00 3.46
2150 2247 2.239654 TCAGCAGGTTTAGATGGGAAGG 59.760 50.000 0.00 0.00 0.00 3.46
2151 2248 2.025887 CAGCAGGTTTAGATGGGAAGGT 60.026 50.000 0.00 0.00 0.00 3.50
2152 2249 3.199946 CAGCAGGTTTAGATGGGAAGGTA 59.800 47.826 0.00 0.00 0.00 3.08
2153 2250 3.456277 AGCAGGTTTAGATGGGAAGGTAG 59.544 47.826 0.00 0.00 0.00 3.18
2154 2251 3.809905 CAGGTTTAGATGGGAAGGTAGC 58.190 50.000 0.00 0.00 0.00 3.58
2155 2252 3.456277 CAGGTTTAGATGGGAAGGTAGCT 59.544 47.826 0.00 0.00 0.00 3.32
2156 2253 3.456277 AGGTTTAGATGGGAAGGTAGCTG 59.544 47.826 0.00 0.00 0.00 4.24
2157 2254 3.200165 GGTTTAGATGGGAAGGTAGCTGT 59.800 47.826 0.00 0.00 0.00 4.40
2158 2255 4.407945 GGTTTAGATGGGAAGGTAGCTGTA 59.592 45.833 0.00 0.00 0.00 2.74
2159 2256 5.358090 GTTTAGATGGGAAGGTAGCTGTAC 58.642 45.833 0.00 0.00 0.00 2.90
2171 2268 0.686441 AGCTGTACATACTCCGCCCA 60.686 55.000 0.00 0.00 0.00 5.36
2276 2373 6.443934 TTTGAGACAAATTTTTCAGGACGA 57.556 33.333 7.08 0.00 0.00 4.20
2548 4661 3.461773 GGAGGAGGCTACGCTGCA 61.462 66.667 0.00 0.00 34.04 4.41
2676 4802 8.458052 AGTACTATCTGCATCTATCAATTCTCG 58.542 37.037 0.00 0.00 0.00 4.04
2684 4810 2.034685 TCTATCAATTCTCGAGCCACCG 59.965 50.000 7.81 0.00 0.00 4.94
2832 7189 2.599408 TGACTTCTACTCCCTCCGTT 57.401 50.000 0.00 0.00 0.00 4.44
2846 7203 6.210984 ACTCCCTCCGTTCCATAATATAAGAC 59.789 42.308 0.00 0.00 0.00 3.01
2900 7259 4.345257 GTCTTACATTATGGGGCAGAGAGA 59.655 45.833 0.00 0.00 0.00 3.10
2901 7260 4.590647 TCTTACATTATGGGGCAGAGAGAG 59.409 45.833 0.00 0.00 0.00 3.20
2916 7275 7.422399 GGCAGAGAGAGTATAAGTCTTTGTAG 58.578 42.308 0.00 0.00 0.00 2.74
2935 7296 5.670485 TGTAGACATTATCATGGACCACAC 58.330 41.667 0.00 0.00 34.27 3.82
2939 7300 2.394930 TTATCATGGACCACACACGG 57.605 50.000 0.00 0.00 0.00 4.94
2958 7319 7.331934 ACACACGGATGTATATAGATGCATTTC 59.668 37.037 11.19 0.00 38.38 2.17
2964 7325 9.096160 GGATGTATATAGATGCATTTCAGAGTG 57.904 37.037 0.00 0.00 38.38 3.51
3007 7368 9.035607 GCTCCGTATATAATTCATAGTGGAATG 57.964 37.037 0.00 0.00 37.55 2.67
3037 7398 9.379791 ACAAAGACTTATATTTAAGAACGGAGG 57.620 33.333 9.58 0.00 38.56 4.30
3046 7407 5.904362 TTTAAGAACGGAGGGAGTACTAC 57.096 43.478 0.00 0.00 0.00 2.73
3179 7549 1.939934 CTTCAAATAATCTGGCGCGGA 59.060 47.619 8.83 2.15 0.00 5.54
3187 7557 3.869272 CTGGCGCGGACTTGCATC 61.869 66.667 8.83 0.00 34.15 3.91
3324 7694 3.762288 CAGCTTTGGCATGCTCCATATAT 59.238 43.478 18.92 0.00 41.70 0.86
3325 7695 4.219944 CAGCTTTGGCATGCTCCATATATT 59.780 41.667 18.92 0.00 41.70 1.28
3326 7696 4.219944 AGCTTTGGCATGCTCCATATATTG 59.780 41.667 18.92 0.00 41.70 1.90
3371 7741 6.038714 GGAATTCCACCAATACATCTTCTGAC 59.961 42.308 20.04 0.00 35.64 3.51
3427 7797 0.762418 TCAAGGATGGTGTTGTCCGT 59.238 50.000 0.00 0.00 39.54 4.69
3430 7800 0.034896 AGGATGGTGTTGTCCGTCAC 59.965 55.000 7.16 0.00 43.21 3.67
3509 7879 9.989296 AGAGAGGAGTATATATTATGAGCTGTT 57.011 33.333 0.00 0.00 0.00 3.16
3519 7889 9.944376 ATATATTATGAGCTGTTTTACGGTGAT 57.056 29.630 0.00 0.00 0.00 3.06
3520 7890 8.677148 ATATTATGAGCTGTTTTACGGTGATT 57.323 30.769 0.00 0.00 0.00 2.57
3521 7891 4.685169 ATGAGCTGTTTTACGGTGATTG 57.315 40.909 0.00 0.00 0.00 2.67
3522 7892 2.811431 TGAGCTGTTTTACGGTGATTGG 59.189 45.455 0.00 0.00 0.00 3.16
3523 7893 2.159382 AGCTGTTTTACGGTGATTGGG 58.841 47.619 0.00 0.00 0.00 4.12
3524 7894 1.883926 GCTGTTTTACGGTGATTGGGT 59.116 47.619 0.00 0.00 0.00 4.51
3525 7895 2.295070 GCTGTTTTACGGTGATTGGGTT 59.705 45.455 0.00 0.00 0.00 4.11
3526 7896 3.502979 GCTGTTTTACGGTGATTGGGTTA 59.497 43.478 0.00 0.00 0.00 2.85
3527 7897 4.379082 GCTGTTTTACGGTGATTGGGTTAG 60.379 45.833 0.00 0.00 0.00 2.34
3528 7898 4.716794 TGTTTTACGGTGATTGGGTTAGT 58.283 39.130 0.00 0.00 0.00 2.24
3529 7899 5.862845 TGTTTTACGGTGATTGGGTTAGTA 58.137 37.500 0.00 0.00 0.00 1.82
3530 7900 5.700373 TGTTTTACGGTGATTGGGTTAGTAC 59.300 40.000 0.00 0.00 0.00 2.73
3531 7901 5.743636 TTTACGGTGATTGGGTTAGTACT 57.256 39.130 0.00 0.00 0.00 2.73
3532 7902 3.881937 ACGGTGATTGGGTTAGTACTC 57.118 47.619 0.00 0.00 0.00 2.59
3533 7903 2.165030 ACGGTGATTGGGTTAGTACTCG 59.835 50.000 0.00 0.00 0.00 4.18
3534 7904 2.480759 CGGTGATTGGGTTAGTACTCGG 60.481 54.545 0.00 0.00 0.00 4.63
3535 7905 2.762327 GGTGATTGGGTTAGTACTCGGA 59.238 50.000 0.00 0.00 0.00 4.55
3536 7906 3.181478 GGTGATTGGGTTAGTACTCGGAG 60.181 52.174 0.00 2.83 0.00 4.63
3537 7907 3.446516 GTGATTGGGTTAGTACTCGGAGT 59.553 47.826 15.95 15.95 0.00 3.85
3538 7908 4.641989 GTGATTGGGTTAGTACTCGGAGTA 59.358 45.833 13.70 13.70 0.00 2.59
3561 7931 6.835819 ACTTAGCAGTACTTACATGTCTGA 57.164 37.500 13.98 0.00 0.00 3.27
3562 7932 7.411486 ACTTAGCAGTACTTACATGTCTGAT 57.589 36.000 13.98 10.66 0.00 2.90
3563 7933 7.484975 ACTTAGCAGTACTTACATGTCTGATC 58.515 38.462 13.98 0.00 0.00 2.92
3564 7934 5.921962 AGCAGTACTTACATGTCTGATCA 57.078 39.130 13.98 0.00 0.00 2.92
3565 7935 5.655488 AGCAGTACTTACATGTCTGATCAC 58.345 41.667 13.98 2.32 0.00 3.06
3566 7936 4.500837 GCAGTACTTACATGTCTGATCACG 59.499 45.833 13.98 0.00 0.00 4.35
3567 7937 5.641709 CAGTACTTACATGTCTGATCACGT 58.358 41.667 0.00 0.00 0.00 4.49
3568 7938 5.739630 CAGTACTTACATGTCTGATCACGTC 59.260 44.000 0.00 0.00 0.00 4.34
3569 7939 5.648526 AGTACTTACATGTCTGATCACGTCT 59.351 40.000 0.00 0.00 0.00 4.18
3570 7940 4.738124 ACTTACATGTCTGATCACGTCTG 58.262 43.478 0.00 0.00 0.00 3.51
3571 7941 4.459337 ACTTACATGTCTGATCACGTCTGA 59.541 41.667 0.00 0.00 33.02 3.27
3572 7942 5.126222 ACTTACATGTCTGATCACGTCTGAT 59.874 40.000 0.00 0.00 40.07 2.90
3573 7943 4.462508 ACATGTCTGATCACGTCTGATT 57.537 40.909 0.00 0.00 37.24 2.57
3574 7944 4.825422 ACATGTCTGATCACGTCTGATTT 58.175 39.130 0.00 0.00 37.24 2.17
3575 7945 5.240891 ACATGTCTGATCACGTCTGATTTT 58.759 37.500 0.00 0.00 37.24 1.82
3576 7946 5.702670 ACATGTCTGATCACGTCTGATTTTT 59.297 36.000 0.00 0.00 37.24 1.94
3577 7947 6.873605 ACATGTCTGATCACGTCTGATTTTTA 59.126 34.615 0.00 0.00 37.24 1.52
3578 7948 7.550551 ACATGTCTGATCACGTCTGATTTTTAT 59.449 33.333 0.00 0.00 37.24 1.40
3579 7949 7.905604 TGTCTGATCACGTCTGATTTTTATT 57.094 32.000 0.00 0.00 37.24 1.40
3580 7950 8.996024 TGTCTGATCACGTCTGATTTTTATTA 57.004 30.769 0.00 0.00 37.24 0.98
3581 7951 9.087424 TGTCTGATCACGTCTGATTTTTATTAG 57.913 33.333 0.00 0.00 37.24 1.73
3582 7952 8.058915 GTCTGATCACGTCTGATTTTTATTAGC 58.941 37.037 0.00 0.00 37.24 3.09
3583 7953 7.224753 TCTGATCACGTCTGATTTTTATTAGCC 59.775 37.037 0.00 0.00 37.24 3.93
3584 7954 5.712217 TCACGTCTGATTTTTATTAGCCG 57.288 39.130 0.00 0.00 0.00 5.52
3585 7955 5.172934 TCACGTCTGATTTTTATTAGCCGT 58.827 37.500 0.00 0.00 0.00 5.68
3586 7956 5.290158 TCACGTCTGATTTTTATTAGCCGTC 59.710 40.000 0.00 0.00 0.00 4.79
3587 7957 5.062934 CACGTCTGATTTTTATTAGCCGTCA 59.937 40.000 0.00 0.00 0.00 4.35
3588 7958 5.291128 ACGTCTGATTTTTATTAGCCGTCAG 59.709 40.000 0.00 0.00 34.45 3.51
3589 7959 5.518847 CGTCTGATTTTTATTAGCCGTCAGA 59.481 40.000 0.00 0.00 38.50 3.27
3590 7960 6.201044 CGTCTGATTTTTATTAGCCGTCAGAT 59.799 38.462 5.59 0.00 41.55 2.90
3591 7961 7.567771 CGTCTGATTTTTATTAGCCGTCAGATC 60.568 40.741 5.59 0.00 41.55 2.75
3592 7962 7.439655 GTCTGATTTTTATTAGCCGTCAGATCT 59.560 37.037 5.59 0.00 41.55 2.75
3593 7963 7.987458 TCTGATTTTTATTAGCCGTCAGATCTT 59.013 33.333 0.00 0.00 36.61 2.40
3594 7964 7.919690 TGATTTTTATTAGCCGTCAGATCTTG 58.080 34.615 0.00 0.00 0.00 3.02
3595 7965 5.734855 TTTTATTAGCCGTCAGATCTTGC 57.265 39.130 0.00 0.00 0.00 4.01
3596 7966 1.858091 ATTAGCCGTCAGATCTTGCG 58.142 50.000 8.31 8.31 0.00 4.85
3597 7967 0.179111 TTAGCCGTCAGATCTTGCGG 60.179 55.000 23.29 23.29 44.21 5.69
3598 7968 2.016393 TAGCCGTCAGATCTTGCGGG 62.016 60.000 26.53 13.36 42.73 6.13
3599 7969 2.202932 CCGTCAGATCTTGCGGGG 60.203 66.667 21.05 4.28 40.48 5.73
3600 7970 2.721167 CCGTCAGATCTTGCGGGGA 61.721 63.158 21.05 1.07 40.48 4.81
3601 7971 1.218047 CGTCAGATCTTGCGGGGAA 59.782 57.895 0.00 0.00 0.00 3.97
3602 7972 0.179073 CGTCAGATCTTGCGGGGAAT 60.179 55.000 0.00 0.00 0.00 3.01
3603 7973 1.743772 CGTCAGATCTTGCGGGGAATT 60.744 52.381 0.00 0.00 0.00 2.17
3604 7974 2.369394 GTCAGATCTTGCGGGGAATTT 58.631 47.619 0.00 0.00 0.00 1.82
3605 7975 2.755103 GTCAGATCTTGCGGGGAATTTT 59.245 45.455 0.00 0.00 0.00 1.82
3606 7976 3.945285 GTCAGATCTTGCGGGGAATTTTA 59.055 43.478 0.00 0.00 0.00 1.52
3607 7977 4.398044 GTCAGATCTTGCGGGGAATTTTAA 59.602 41.667 0.00 0.00 0.00 1.52
3608 7978 5.067805 GTCAGATCTTGCGGGGAATTTTAAT 59.932 40.000 0.00 0.00 0.00 1.40
3609 7979 5.656416 TCAGATCTTGCGGGGAATTTTAATT 59.344 36.000 0.00 0.00 0.00 1.40
3610 7980 5.750067 CAGATCTTGCGGGGAATTTTAATTG 59.250 40.000 0.00 0.00 0.00 2.32
3611 7981 5.656416 AGATCTTGCGGGGAATTTTAATTGA 59.344 36.000 0.00 0.00 0.00 2.57
3612 7982 5.930837 TCTTGCGGGGAATTTTAATTGAT 57.069 34.783 0.00 0.00 0.00 2.57
3613 7983 6.293004 TCTTGCGGGGAATTTTAATTGATT 57.707 33.333 0.00 0.00 0.00 2.57
3614 7984 7.411486 TCTTGCGGGGAATTTTAATTGATTA 57.589 32.000 0.00 0.00 0.00 1.75
3615 7985 7.841956 TCTTGCGGGGAATTTTAATTGATTAA 58.158 30.769 0.00 0.00 0.00 1.40
3616 7986 8.314751 TCTTGCGGGGAATTTTAATTGATTAAA 58.685 29.630 5.11 5.11 39.65 1.52
3617 7987 9.108284 CTTGCGGGGAATTTTAATTGATTAAAT 57.892 29.630 9.11 0.00 40.65 1.40
3618 7988 9.454859 TTGCGGGGAATTTTAATTGATTAAATT 57.545 25.926 9.11 4.46 40.65 1.82
3619 7989 9.454859 TGCGGGGAATTTTAATTGATTAAATTT 57.545 25.926 9.11 11.02 40.65 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 1.817941 AACCAGCACCGACACACAC 60.818 57.895 0.00 0.00 0.00 3.82
19 20 0.953471 TGCATACAACCAGCACCGAC 60.953 55.000 0.00 0.00 32.55 4.79
20 21 0.035534 ATGCATACAACCAGCACCGA 60.036 50.000 0.00 0.00 41.60 4.69
21 22 0.378257 GATGCATACAACCAGCACCG 59.622 55.000 0.00 0.00 41.60 4.94
54 55 1.822371 ACAATGAATAAACACCCGCCC 59.178 47.619 0.00 0.00 0.00 6.13
56 57 3.569250 ACACAATGAATAAACACCCGC 57.431 42.857 0.00 0.00 0.00 6.13
447 457 4.479786 ACTGGTGCTTGCCTTTTAAAAA 57.520 36.364 1.66 0.00 0.00 1.94
460 470 0.249489 GAGACGTGACAACTGGTGCT 60.249 55.000 0.00 0.00 0.00 4.40
684 703 3.632145 ACCAACAAATCGAAGCTTGTCTT 59.368 39.130 2.10 0.00 33.34 3.01
738 757 5.008613 ACACAATGTACACTAGCAAAACAGG 59.991 40.000 0.00 0.00 0.00 4.00
825 846 1.335182 CACTCACTACCAGCGATCGAT 59.665 52.381 21.57 10.64 0.00 3.59
856 877 1.332889 ATGCTCGCTGATGGAGACCA 61.333 55.000 0.00 0.00 38.19 4.02
881 908 0.466189 AACCAACTCAGTGGGTGCAG 60.466 55.000 3.96 0.00 39.24 4.41
1061 1098 4.022068 AGGACCGAGTACGTTAATTCACAA 60.022 41.667 0.00 0.00 37.88 3.33
1062 1099 3.507233 AGGACCGAGTACGTTAATTCACA 59.493 43.478 0.00 0.00 37.88 3.58
1099 1136 2.151202 GACCTGCACTTCGAAATCCAA 58.849 47.619 0.00 0.00 0.00 3.53
1143 1180 4.308458 TCTTCACCACCACGGCCG 62.308 66.667 26.86 26.86 39.03 6.13
1144 1181 2.668550 GTCTTCACCACCACGGCC 60.669 66.667 0.00 0.00 39.03 6.13
1145 1182 3.041940 CGTCTTCACCACCACGGC 61.042 66.667 0.00 0.00 39.03 5.68
1146 1183 2.357034 CCGTCTTCACCACCACGG 60.357 66.667 0.00 0.00 45.38 4.94
1147 1184 1.954146 CACCGTCTTCACCACCACG 60.954 63.158 0.00 0.00 0.00 4.94
1148 1185 1.597027 CCACCGTCTTCACCACCAC 60.597 63.158 0.00 0.00 0.00 4.16
1149 1186 1.762858 TCCACCGTCTTCACCACCA 60.763 57.895 0.00 0.00 0.00 4.17
1152 1189 1.458777 AGGTCCACCGTCTTCACCA 60.459 57.895 0.00 0.00 42.08 4.17
1326 1417 3.385384 CGTCCTGCTGCTCCTGGA 61.385 66.667 0.00 0.00 0.00 3.86
1327 1418 4.463879 CCGTCCTGCTGCTCCTGG 62.464 72.222 0.00 0.00 0.00 4.45
1330 1421 4.479993 ATGCCGTCCTGCTGCTCC 62.480 66.667 0.00 0.00 0.00 4.70
1331 1422 2.937379 ATCATGCCGTCCTGCTGCTC 62.937 60.000 0.00 0.00 0.00 4.26
1332 1423 3.040206 ATCATGCCGTCCTGCTGCT 62.040 57.895 0.00 0.00 0.00 4.24
1333 1424 2.515523 ATCATGCCGTCCTGCTGC 60.516 61.111 0.00 0.00 0.00 5.25
1334 1425 0.179076 TACATCATGCCGTCCTGCTG 60.179 55.000 0.00 0.00 0.00 4.41
1447 1538 4.577834 AGAAGAGGAGATTAGTTAGCGC 57.422 45.455 0.00 0.00 0.00 5.92
1448 1539 7.877003 TCAATAGAAGAGGAGATTAGTTAGCG 58.123 38.462 0.00 0.00 0.00 4.26
1455 1546 9.883293 TGTAAGGATCAATAGAAGAGGAGATTA 57.117 33.333 0.00 0.00 0.00 1.75
1466 1557 2.035449 CGGCGGTGTAAGGATCAATAGA 59.965 50.000 0.00 0.00 0.00 1.98
1472 1563 2.588034 GGCGGCGGTGTAAGGATC 60.588 66.667 9.78 0.00 0.00 3.36
1478 1570 1.110518 TCTATGATGGCGGCGGTGTA 61.111 55.000 9.78 0.00 0.00 2.90
1483 1575 1.073964 CTGAATCTATGATGGCGGCG 58.926 55.000 0.51 0.51 0.00 6.46
1485 1577 2.028294 AGAGCTGAATCTATGATGGCGG 60.028 50.000 0.00 0.00 0.00 6.13
1501 1593 0.545309 TGGTGCCTAAGGACAGAGCT 60.545 55.000 0.00 0.00 0.00 4.09
1507 1599 3.945921 GAGGTTAATTGGTGCCTAAGGAC 59.054 47.826 0.00 0.00 0.00 3.85
1514 1611 1.092348 GACGGAGGTTAATTGGTGCC 58.908 55.000 0.00 0.00 0.00 5.01
1518 1615 5.547465 TGCATATAGACGGAGGTTAATTGG 58.453 41.667 0.00 0.00 0.00 3.16
1567 1664 2.596553 AAAGGTTGCACGTGGACGGA 62.597 55.000 18.88 0.00 44.95 4.69
1791 1888 3.323691 GGCCTTGCCCTTTTCTCTAAAAA 59.676 43.478 0.00 0.00 44.06 1.94
1792 1889 2.897326 GGCCTTGCCCTTTTCTCTAAAA 59.103 45.455 0.00 0.00 44.06 1.52
1793 1890 2.525368 GGCCTTGCCCTTTTCTCTAAA 58.475 47.619 0.00 0.00 44.06 1.85
1794 1891 2.215942 GGCCTTGCCCTTTTCTCTAA 57.784 50.000 0.00 0.00 44.06 2.10
1795 1892 3.978876 GGCCTTGCCCTTTTCTCTA 57.021 52.632 0.00 0.00 44.06 2.43
1796 1893 4.852388 GGCCTTGCCCTTTTCTCT 57.148 55.556 0.00 0.00 44.06 3.10
1805 1902 7.730663 CTTTATCTATAAAGTCGGGCCTTGCC 61.731 46.154 0.84 0.00 44.04 4.52
1806 1903 2.614829 TCTATAAAGTCGGGCCTTGC 57.385 50.000 0.84 0.00 0.00 4.01
1807 1904 5.179555 GCTTTATCTATAAAGTCGGGCCTTG 59.820 44.000 18.85 0.00 46.78 3.61
1808 1905 5.306394 GCTTTATCTATAAAGTCGGGCCTT 58.694 41.667 18.85 0.00 46.78 4.35
1809 1906 4.262938 GGCTTTATCTATAAAGTCGGGCCT 60.263 45.833 18.85 0.00 46.78 5.19
1810 1907 4.001652 GGCTTTATCTATAAAGTCGGGCC 58.998 47.826 18.85 12.81 46.78 5.80
1831 1928 3.129502 CGTGATGCTGCCTGGTGG 61.130 66.667 0.00 0.00 0.00 4.61
1832 1929 2.881539 ATCCGTGATGCTGCCTGGTG 62.882 60.000 0.00 0.00 0.00 4.17
1833 1930 1.337384 TATCCGTGATGCTGCCTGGT 61.337 55.000 0.00 0.00 0.00 4.00
1834 1931 0.882042 GTATCCGTGATGCTGCCTGG 60.882 60.000 0.00 0.00 0.00 4.45
1835 1932 0.882042 GGTATCCGTGATGCTGCCTG 60.882 60.000 0.00 0.00 0.00 4.85
1836 1933 1.337384 TGGTATCCGTGATGCTGCCT 61.337 55.000 0.00 0.00 0.00 4.75
1837 1934 0.250467 ATGGTATCCGTGATGCTGCC 60.250 55.000 0.00 0.00 0.00 4.85
1838 1935 2.341257 CTATGGTATCCGTGATGCTGC 58.659 52.381 0.00 0.00 0.00 5.25
1839 1936 2.300152 ACCTATGGTATCCGTGATGCTG 59.700 50.000 0.00 0.00 32.11 4.41
1840 1937 2.609747 ACCTATGGTATCCGTGATGCT 58.390 47.619 0.00 0.00 32.11 3.79
1841 1938 3.244078 TGAACCTATGGTATCCGTGATGC 60.244 47.826 0.00 0.00 33.12 3.91
1842 1939 4.202212 TGTGAACCTATGGTATCCGTGATG 60.202 45.833 0.00 0.00 33.12 3.07
1843 1940 3.964688 TGTGAACCTATGGTATCCGTGAT 59.035 43.478 0.00 0.00 33.12 3.06
1844 1941 3.367321 TGTGAACCTATGGTATCCGTGA 58.633 45.455 0.00 0.00 33.12 4.35
1845 1942 3.492656 CCTGTGAACCTATGGTATCCGTG 60.493 52.174 0.00 0.00 33.12 4.94
1846 1943 2.698797 CCTGTGAACCTATGGTATCCGT 59.301 50.000 0.00 0.00 33.12 4.69
1847 1944 2.963101 TCCTGTGAACCTATGGTATCCG 59.037 50.000 0.00 0.00 33.12 4.18
1848 1945 5.367945 TTTCCTGTGAACCTATGGTATCC 57.632 43.478 0.00 0.00 33.12 2.59
1849 1946 6.177610 TGTTTTCCTGTGAACCTATGGTATC 58.822 40.000 0.00 0.00 33.12 2.24
1850 1947 6.134535 TGTTTTCCTGTGAACCTATGGTAT 57.865 37.500 0.00 0.00 33.12 2.73
1851 1948 5.570205 TGTTTTCCTGTGAACCTATGGTA 57.430 39.130 0.00 0.00 33.12 3.25
1852 1949 4.447138 TGTTTTCCTGTGAACCTATGGT 57.553 40.909 0.00 0.00 37.65 3.55
1853 1950 6.127730 GGTTATGTTTTCCTGTGAACCTATGG 60.128 42.308 0.00 0.00 33.58 2.74
1854 1951 6.432783 TGGTTATGTTTTCCTGTGAACCTATG 59.567 38.462 0.00 0.00 36.61 2.23
1855 1952 6.433093 GTGGTTATGTTTTCCTGTGAACCTAT 59.567 38.462 0.00 0.00 36.61 2.57
1856 1953 5.766174 GTGGTTATGTTTTCCTGTGAACCTA 59.234 40.000 0.00 0.00 36.61 3.08
1857 1954 4.583073 GTGGTTATGTTTTCCTGTGAACCT 59.417 41.667 0.00 0.00 36.61 3.50
1858 1955 4.339814 TGTGGTTATGTTTTCCTGTGAACC 59.660 41.667 0.00 0.00 36.28 3.62
1859 1956 5.163602 TGTGTGGTTATGTTTTCCTGTGAAC 60.164 40.000 0.00 0.00 0.00 3.18
1860 1957 4.950475 TGTGTGGTTATGTTTTCCTGTGAA 59.050 37.500 0.00 0.00 0.00 3.18
1861 1958 4.527944 TGTGTGGTTATGTTTTCCTGTGA 58.472 39.130 0.00 0.00 0.00 3.58
1862 1959 4.578516 TCTGTGTGGTTATGTTTTCCTGTG 59.421 41.667 0.00 0.00 0.00 3.66
1863 1960 4.787551 TCTGTGTGGTTATGTTTTCCTGT 58.212 39.130 0.00 0.00 0.00 4.00
1864 1961 4.216257 CCTCTGTGTGGTTATGTTTTCCTG 59.784 45.833 0.00 0.00 0.00 3.86
1865 1962 4.104102 TCCTCTGTGTGGTTATGTTTTCCT 59.896 41.667 0.00 0.00 0.00 3.36
1866 1963 4.394729 TCCTCTGTGTGGTTATGTTTTCC 58.605 43.478 0.00 0.00 0.00 3.13
1867 1964 5.063880 ACTCCTCTGTGTGGTTATGTTTTC 58.936 41.667 0.00 0.00 0.00 2.29
1868 1965 5.048846 ACTCCTCTGTGTGGTTATGTTTT 57.951 39.130 0.00 0.00 0.00 2.43
1869 1966 4.706842 ACTCCTCTGTGTGGTTATGTTT 57.293 40.909 0.00 0.00 0.00 2.83
1870 1967 4.706842 AACTCCTCTGTGTGGTTATGTT 57.293 40.909 0.00 0.00 0.00 2.71
1871 1968 4.706842 AAACTCCTCTGTGTGGTTATGT 57.293 40.909 0.00 0.00 0.00 2.29
1872 1969 6.464222 TCTTAAACTCCTCTGTGTGGTTATG 58.536 40.000 0.00 0.00 0.00 1.90
1873 1970 6.681729 TCTTAAACTCCTCTGTGTGGTTAT 57.318 37.500 0.00 0.00 0.00 1.89
1874 1971 6.488769 TTCTTAAACTCCTCTGTGTGGTTA 57.511 37.500 0.00 0.00 0.00 2.85
1875 1972 5.367945 TTCTTAAACTCCTCTGTGTGGTT 57.632 39.130 0.00 0.00 0.00 3.67
1876 1973 5.367945 TTTCTTAAACTCCTCTGTGTGGT 57.632 39.130 0.00 0.00 0.00 4.16
1877 1974 6.459710 GGTTTTTCTTAAACTCCTCTGTGTGG 60.460 42.308 0.00 0.00 0.00 4.17
1878 1975 6.318900 AGGTTTTTCTTAAACTCCTCTGTGTG 59.681 38.462 0.00 0.00 0.00 3.82
1879 1976 6.424032 AGGTTTTTCTTAAACTCCTCTGTGT 58.576 36.000 0.00 0.00 0.00 3.72
1880 1977 6.944234 AGGTTTTTCTTAAACTCCTCTGTG 57.056 37.500 0.00 0.00 0.00 3.66
1881 1978 7.228906 GCTTAGGTTTTTCTTAAACTCCTCTGT 59.771 37.037 0.00 0.00 33.09 3.41
1882 1979 7.228706 TGCTTAGGTTTTTCTTAAACTCCTCTG 59.771 37.037 0.00 0.00 33.09 3.35
1883 1980 7.287810 TGCTTAGGTTTTTCTTAAACTCCTCT 58.712 34.615 0.00 0.00 33.09 3.69
1884 1981 7.506328 TGCTTAGGTTTTTCTTAAACTCCTC 57.494 36.000 0.00 0.00 33.09 3.71
1885 1982 7.470147 GCTTGCTTAGGTTTTTCTTAAACTCCT 60.470 37.037 0.00 0.00 34.40 3.69
1886 1983 6.641314 GCTTGCTTAGGTTTTTCTTAAACTCC 59.359 38.462 0.00 0.00 0.00 3.85
1887 1984 7.200455 TGCTTGCTTAGGTTTTTCTTAAACTC 58.800 34.615 0.00 0.00 0.00 3.01
1888 1985 7.107639 TGCTTGCTTAGGTTTTTCTTAAACT 57.892 32.000 0.00 0.00 0.00 2.66
1889 1986 7.651704 TCATGCTTGCTTAGGTTTTTCTTAAAC 59.348 33.333 0.00 0.00 0.00 2.01
1890 1987 7.721402 TCATGCTTGCTTAGGTTTTTCTTAAA 58.279 30.769 0.00 0.00 0.00 1.52
1891 1988 7.283625 TCATGCTTGCTTAGGTTTTTCTTAA 57.716 32.000 0.00 0.00 0.00 1.85
1892 1989 6.892658 TCATGCTTGCTTAGGTTTTTCTTA 57.107 33.333 0.00 0.00 0.00 2.10
1893 1990 5.789643 TCATGCTTGCTTAGGTTTTTCTT 57.210 34.783 0.00 0.00 0.00 2.52
1894 1991 5.990120 ATCATGCTTGCTTAGGTTTTTCT 57.010 34.783 0.00 0.00 0.00 2.52
1895 1992 6.620678 TGTATCATGCTTGCTTAGGTTTTTC 58.379 36.000 0.00 0.00 0.00 2.29
1896 1993 6.350445 CCTGTATCATGCTTGCTTAGGTTTTT 60.350 38.462 0.00 0.00 0.00 1.94
1897 1994 5.126061 CCTGTATCATGCTTGCTTAGGTTTT 59.874 40.000 0.00 0.00 0.00 2.43
1898 1995 4.641989 CCTGTATCATGCTTGCTTAGGTTT 59.358 41.667 0.00 0.00 0.00 3.27
1899 1996 4.202441 CCTGTATCATGCTTGCTTAGGTT 58.798 43.478 0.00 0.00 0.00 3.50
1900 1997 3.813443 CCTGTATCATGCTTGCTTAGGT 58.187 45.455 0.00 0.00 0.00 3.08
1901 1998 2.551459 GCCTGTATCATGCTTGCTTAGG 59.449 50.000 0.00 2.01 0.00 2.69
1902 1999 3.208594 TGCCTGTATCATGCTTGCTTAG 58.791 45.455 0.00 0.00 0.00 2.18
1903 2000 3.280197 TGCCTGTATCATGCTTGCTTA 57.720 42.857 0.00 0.00 0.00 3.09
1904 2001 2.133281 TGCCTGTATCATGCTTGCTT 57.867 45.000 0.00 0.00 0.00 3.91
1905 2002 1.747355 GTTGCCTGTATCATGCTTGCT 59.253 47.619 0.00 0.00 0.00 3.91
1906 2003 1.747355 AGTTGCCTGTATCATGCTTGC 59.253 47.619 0.00 0.00 0.00 4.01
1907 2004 2.479049 GCAGTTGCCTGTATCATGCTTG 60.479 50.000 0.00 0.00 41.02 4.01
1908 2005 1.747355 GCAGTTGCCTGTATCATGCTT 59.253 47.619 0.00 0.00 41.02 3.91
1909 2006 1.386533 GCAGTTGCCTGTATCATGCT 58.613 50.000 0.00 0.00 41.02 3.79
1910 2007 3.932459 GCAGTTGCCTGTATCATGC 57.068 52.632 0.00 0.00 41.02 4.06
1921 2018 2.431942 GCTGTGCATGGCAGTTGC 60.432 61.111 6.13 6.13 40.08 4.17
1922 2019 2.126618 CGCTGTGCATGGCAGTTG 60.127 61.111 12.92 0.00 40.08 3.16
1923 2020 4.047059 GCGCTGTGCATGGCAGTT 62.047 61.111 8.57 0.00 45.45 3.16
1942 2039 3.009115 TTTCTCCTCCCCGGCCTG 61.009 66.667 0.00 0.00 0.00 4.85
1943 2040 2.689034 CTTTCTCCTCCCCGGCCT 60.689 66.667 0.00 0.00 0.00 5.19
1944 2041 2.687566 TCTTTCTCCTCCCCGGCC 60.688 66.667 0.00 0.00 0.00 6.13
1945 2042 2.585153 GTCTTTCTCCTCCCCGGC 59.415 66.667 0.00 0.00 0.00 6.13
1946 2043 1.198759 TTGGTCTTTCTCCTCCCCGG 61.199 60.000 0.00 0.00 0.00 5.73
1947 2044 0.690762 TTTGGTCTTTCTCCTCCCCG 59.309 55.000 0.00 0.00 0.00 5.73
1948 2045 2.041755 ACATTTGGTCTTTCTCCTCCCC 59.958 50.000 0.00 0.00 0.00 4.81
1949 2046 3.348119 GACATTTGGTCTTTCTCCTCCC 58.652 50.000 0.00 0.00 43.46 4.30
1950 2047 3.348119 GGACATTTGGTCTTTCTCCTCC 58.652 50.000 0.00 0.00 46.16 4.30
1951 2048 3.003480 CGGACATTTGGTCTTTCTCCTC 58.997 50.000 0.00 0.00 46.16 3.71
1952 2049 2.876079 GCGGACATTTGGTCTTTCTCCT 60.876 50.000 0.00 0.00 46.16 3.69
1953 2050 1.468914 GCGGACATTTGGTCTTTCTCC 59.531 52.381 0.00 0.00 46.16 3.71
1954 2051 2.151202 TGCGGACATTTGGTCTTTCTC 58.849 47.619 0.00 0.00 46.16 2.87
1955 2052 2.270352 TGCGGACATTTGGTCTTTCT 57.730 45.000 0.00 0.00 46.16 2.52
1956 2053 3.049912 GTTTGCGGACATTTGGTCTTTC 58.950 45.455 0.00 0.00 46.16 2.62
1957 2054 2.542824 CGTTTGCGGACATTTGGTCTTT 60.543 45.455 0.00 0.00 46.16 2.52
1958 2055 1.001815 CGTTTGCGGACATTTGGTCTT 60.002 47.619 0.00 0.00 46.16 3.01
1959 2056 0.591170 CGTTTGCGGACATTTGGTCT 59.409 50.000 0.00 0.00 46.16 3.85
1960 2057 0.589223 TCGTTTGCGGACATTTGGTC 59.411 50.000 0.00 0.00 46.20 4.02
1961 2058 0.309612 GTCGTTTGCGGACATTTGGT 59.690 50.000 0.00 0.00 38.89 3.67
1962 2059 0.309302 TGTCGTTTGCGGACATTTGG 59.691 50.000 0.00 0.00 38.89 3.28
1963 2060 1.673760 CTGTCGTTTGCGGACATTTG 58.326 50.000 0.00 0.00 38.89 2.32
1964 2061 0.040425 GCTGTCGTTTGCGGACATTT 60.040 50.000 0.00 0.00 38.89 2.32
1965 2062 1.163420 TGCTGTCGTTTGCGGACATT 61.163 50.000 0.00 0.00 38.89 2.71
1966 2063 1.596752 TGCTGTCGTTTGCGGACAT 60.597 52.632 0.00 0.00 38.89 3.06
1967 2064 2.202946 TGCTGTCGTTTGCGGACA 60.203 55.556 0.00 0.00 38.89 4.02
1968 2065 2.248431 GTGCTGTCGTTTGCGGAC 59.752 61.111 0.00 0.00 38.89 4.79
1969 2066 2.970324 GGTGCTGTCGTTTGCGGA 60.970 61.111 0.00 0.00 38.89 5.54
1970 2067 2.329678 TTTGGTGCTGTCGTTTGCGG 62.330 55.000 0.00 0.00 38.89 5.69
1971 2068 0.317770 ATTTGGTGCTGTCGTTTGCG 60.318 50.000 0.00 0.00 39.92 4.85
1972 2069 1.851658 AATTTGGTGCTGTCGTTTGC 58.148 45.000 0.00 0.00 0.00 3.68
1973 2070 4.786068 CGTATAATTTGGTGCTGTCGTTTG 59.214 41.667 0.00 0.00 0.00 2.93
1974 2071 4.142773 CCGTATAATTTGGTGCTGTCGTTT 60.143 41.667 0.00 0.00 0.00 3.60
1975 2072 3.372822 CCGTATAATTTGGTGCTGTCGTT 59.627 43.478 0.00 0.00 0.00 3.85
1976 2073 2.933906 CCGTATAATTTGGTGCTGTCGT 59.066 45.455 0.00 0.00 0.00 4.34
1977 2074 2.286184 GCCGTATAATTTGGTGCTGTCG 60.286 50.000 0.00 0.00 0.00 4.35
1978 2075 2.680841 TGCCGTATAATTTGGTGCTGTC 59.319 45.455 0.00 0.00 0.00 3.51
1979 2076 2.682856 CTGCCGTATAATTTGGTGCTGT 59.317 45.455 0.00 0.00 0.00 4.40
1980 2077 2.033299 CCTGCCGTATAATTTGGTGCTG 59.967 50.000 0.00 0.00 0.00 4.41
1981 2078 2.297701 CCTGCCGTATAATTTGGTGCT 58.702 47.619 0.00 0.00 0.00 4.40
1982 2079 1.336755 CCCTGCCGTATAATTTGGTGC 59.663 52.381 0.00 0.00 0.00 5.01
1983 2080 2.650322 ACCCTGCCGTATAATTTGGTG 58.350 47.619 0.00 0.00 0.00 4.17
1984 2081 3.284617 GAACCCTGCCGTATAATTTGGT 58.715 45.455 0.00 0.00 0.00 3.67
1985 2082 2.289547 CGAACCCTGCCGTATAATTTGG 59.710 50.000 0.00 0.00 0.00 3.28
1986 2083 2.940410 ACGAACCCTGCCGTATAATTTG 59.060 45.455 0.00 0.00 37.23 2.32
1987 2084 3.200483 GACGAACCCTGCCGTATAATTT 58.800 45.455 0.00 0.00 39.30 1.82
1988 2085 2.484241 GGACGAACCCTGCCGTATAATT 60.484 50.000 0.00 0.00 39.30 1.40
1989 2086 1.069668 GGACGAACCCTGCCGTATAAT 59.930 52.381 0.00 0.00 39.30 1.28
1990 2087 0.461135 GGACGAACCCTGCCGTATAA 59.539 55.000 0.00 0.00 39.30 0.98
1991 2088 2.118132 GGACGAACCCTGCCGTATA 58.882 57.895 0.00 0.00 39.30 1.47
1992 2089 2.897972 GGACGAACCCTGCCGTAT 59.102 61.111 0.00 0.00 39.30 3.06
2006 2103 3.506455 TCGATTTCTCAGATATCCGGGAC 59.494 47.826 0.00 0.00 0.00 4.46
2007 2104 3.763057 TCGATTTCTCAGATATCCGGGA 58.237 45.455 0.00 0.00 0.00 5.14
2008 2105 4.489810 CTTCGATTTCTCAGATATCCGGG 58.510 47.826 0.00 0.00 0.00 5.73
2009 2106 3.923461 GCTTCGATTTCTCAGATATCCGG 59.077 47.826 0.00 0.00 0.00 5.14
2010 2107 3.923461 GGCTTCGATTTCTCAGATATCCG 59.077 47.826 0.00 0.00 0.00 4.18
2011 2108 4.249661 GGGCTTCGATTTCTCAGATATCC 58.750 47.826 0.00 0.00 0.00 2.59
2012 2109 3.923461 CGGGCTTCGATTTCTCAGATATC 59.077 47.826 0.00 0.00 42.43 1.63
2013 2110 3.574396 TCGGGCTTCGATTTCTCAGATAT 59.426 43.478 0.00 0.00 43.74 1.63
2014 2111 2.956333 TCGGGCTTCGATTTCTCAGATA 59.044 45.455 0.00 0.00 43.74 1.98
2015 2112 1.757118 TCGGGCTTCGATTTCTCAGAT 59.243 47.619 0.00 0.00 43.74 2.90
2016 2113 1.182667 TCGGGCTTCGATTTCTCAGA 58.817 50.000 0.00 0.00 43.74 3.27
2017 2114 3.741029 TCGGGCTTCGATTTCTCAG 57.259 52.632 0.00 0.00 43.74 3.35
2026 2123 2.697431 TCAACAAAATTCGGGCTTCG 57.303 45.000 0.00 0.00 40.90 3.79
2027 2124 4.168760 CTCATCAACAAAATTCGGGCTTC 58.831 43.478 0.00 0.00 0.00 3.86
2028 2125 3.614870 GCTCATCAACAAAATTCGGGCTT 60.615 43.478 0.00 0.00 0.00 4.35
2029 2126 2.094545 GCTCATCAACAAAATTCGGGCT 60.095 45.455 0.00 0.00 0.00 5.19
2030 2127 2.262211 GCTCATCAACAAAATTCGGGC 58.738 47.619 0.00 0.00 0.00 6.13
2031 2128 3.504863 CTGCTCATCAACAAAATTCGGG 58.495 45.455 0.00 0.00 0.00 5.14
2032 2129 3.057315 ACCTGCTCATCAACAAAATTCGG 60.057 43.478 0.00 0.00 0.00 4.30
2033 2130 4.161333 GACCTGCTCATCAACAAAATTCG 58.839 43.478 0.00 0.00 0.00 3.34
2034 2131 4.022068 TGGACCTGCTCATCAACAAAATTC 60.022 41.667 0.00 0.00 0.00 2.17
2035 2132 3.896888 TGGACCTGCTCATCAACAAAATT 59.103 39.130 0.00 0.00 0.00 1.82
2036 2133 3.499338 TGGACCTGCTCATCAACAAAAT 58.501 40.909 0.00 0.00 0.00 1.82
2037 2134 2.886523 CTGGACCTGCTCATCAACAAAA 59.113 45.455 0.00 0.00 0.00 2.44
2038 2135 2.507484 CTGGACCTGCTCATCAACAAA 58.493 47.619 0.00 0.00 0.00 2.83
2039 2136 1.271543 CCTGGACCTGCTCATCAACAA 60.272 52.381 0.00 0.00 0.00 2.83
2040 2137 0.325933 CCTGGACCTGCTCATCAACA 59.674 55.000 0.00 0.00 0.00 3.33
2041 2138 0.393537 CCCTGGACCTGCTCATCAAC 60.394 60.000 0.00 0.00 0.00 3.18
2042 2139 1.993653 CCCTGGACCTGCTCATCAA 59.006 57.895 0.00 0.00 0.00 2.57
2043 2140 2.673200 GCCCTGGACCTGCTCATCA 61.673 63.158 0.00 0.00 0.00 3.07
2044 2141 1.992519 ATGCCCTGGACCTGCTCATC 61.993 60.000 0.00 0.00 0.00 2.92
2045 2142 1.992519 GATGCCCTGGACCTGCTCAT 61.993 60.000 0.00 0.00 0.00 2.90
2046 2143 2.611800 ATGCCCTGGACCTGCTCA 60.612 61.111 0.00 0.00 0.00 4.26
2047 2144 2.191641 GATGCCCTGGACCTGCTC 59.808 66.667 0.00 0.00 0.00 4.26
2048 2145 3.415087 GGATGCCCTGGACCTGCT 61.415 66.667 0.00 0.00 0.00 4.24
2049 2146 4.512914 GGGATGCCCTGGACCTGC 62.513 72.222 0.00 0.00 41.34 4.85
2050 2147 4.181010 CGGGATGCCCTGGACCTG 62.181 72.222 0.00 0.00 42.67 4.00
2051 2148 3.721172 ATCGGGATGCCCTGGACCT 62.721 63.158 0.00 0.00 42.67 3.85
2052 2149 3.171388 ATCGGGATGCCCTGGACC 61.171 66.667 0.00 0.00 42.67 4.46
2053 2150 2.388890 CTGATCGGGATGCCCTGGAC 62.389 65.000 0.00 0.00 42.67 4.02
2054 2151 2.040988 TGATCGGGATGCCCTGGA 60.041 61.111 0.00 0.00 42.67 3.86
2055 2152 2.429058 CTGATCGGGATGCCCTGG 59.571 66.667 0.00 0.00 42.67 4.45
2056 2153 2.429058 CCTGATCGGGATGCCCTG 59.571 66.667 16.28 0.00 42.67 4.45
2057 2154 3.564218 GCCTGATCGGGATGCCCT 61.564 66.667 25.54 0.00 42.67 5.19
2058 2155 3.543536 GAGCCTGATCGGGATGCCC 62.544 68.421 25.54 5.88 41.09 5.36
2059 2156 2.031768 GAGCCTGATCGGGATGCC 59.968 66.667 25.54 6.28 0.00 4.40
2060 2157 2.031768 GGAGCCTGATCGGGATGC 59.968 66.667 25.54 20.30 0.00 3.91
2061 2158 1.274728 CTAAGGAGCCTGATCGGGATG 59.725 57.143 25.54 1.31 0.00 3.51
2062 2159 1.133009 ACTAAGGAGCCTGATCGGGAT 60.133 52.381 25.54 19.48 0.00 3.85
2063 2160 0.261991 ACTAAGGAGCCTGATCGGGA 59.738 55.000 25.54 0.57 0.00 5.14
2064 2161 0.676736 GACTAAGGAGCCTGATCGGG 59.323 60.000 16.98 16.98 0.00 5.14
2065 2162 1.403814 TGACTAAGGAGCCTGATCGG 58.596 55.000 0.00 0.00 0.00 4.18
2066 2163 3.068732 TCATTGACTAAGGAGCCTGATCG 59.931 47.826 0.00 0.00 0.00 3.69
2067 2164 4.679373 TCATTGACTAAGGAGCCTGATC 57.321 45.455 0.00 0.00 0.00 2.92
2068 2165 4.906664 AGATCATTGACTAAGGAGCCTGAT 59.093 41.667 0.00 0.00 33.83 2.90
2069 2166 4.293494 AGATCATTGACTAAGGAGCCTGA 58.707 43.478 0.00 0.00 33.83 3.86
2070 2167 4.502950 GGAGATCATTGACTAAGGAGCCTG 60.503 50.000 0.00 0.00 33.83 4.85
2071 2168 3.645687 GGAGATCATTGACTAAGGAGCCT 59.354 47.826 0.00 0.00 33.83 4.58
2072 2169 3.389329 TGGAGATCATTGACTAAGGAGCC 59.611 47.826 0.00 0.00 33.83 4.70
2073 2170 4.100808 AGTGGAGATCATTGACTAAGGAGC 59.899 45.833 0.00 0.00 33.55 4.70
2074 2171 5.599732 CAGTGGAGATCATTGACTAAGGAG 58.400 45.833 0.00 0.00 35.40 3.69
2075 2172 4.141846 GCAGTGGAGATCATTGACTAAGGA 60.142 45.833 0.00 0.00 35.40 3.36
2076 2173 4.125703 GCAGTGGAGATCATTGACTAAGG 58.874 47.826 0.00 0.00 35.40 2.69
2077 2174 4.809958 CAGCAGTGGAGATCATTGACTAAG 59.190 45.833 0.00 0.00 35.40 2.18
2078 2175 4.763073 CAGCAGTGGAGATCATTGACTAA 58.237 43.478 0.00 0.00 35.40 2.24
2079 2176 3.431346 GCAGCAGTGGAGATCATTGACTA 60.431 47.826 0.00 0.00 35.40 2.59
2080 2177 2.680221 GCAGCAGTGGAGATCATTGACT 60.680 50.000 0.00 0.00 35.40 3.41
2081 2178 1.669779 GCAGCAGTGGAGATCATTGAC 59.330 52.381 0.00 0.00 35.40 3.18
2082 2179 1.279846 TGCAGCAGTGGAGATCATTGA 59.720 47.619 0.00 0.00 35.40 2.57
2083 2180 1.746470 TGCAGCAGTGGAGATCATTG 58.254 50.000 0.00 0.00 36.34 2.82
2084 2181 2.026542 TCTTGCAGCAGTGGAGATCATT 60.027 45.455 0.00 0.00 0.00 2.57
2085 2182 1.558294 TCTTGCAGCAGTGGAGATCAT 59.442 47.619 0.00 0.00 0.00 2.45
2086 2183 0.978907 TCTTGCAGCAGTGGAGATCA 59.021 50.000 0.00 0.00 0.00 2.92
2087 2184 2.105006 TTCTTGCAGCAGTGGAGATC 57.895 50.000 0.00 0.00 0.00 2.75
2088 2185 2.803030 ATTCTTGCAGCAGTGGAGAT 57.197 45.000 0.00 0.00 0.00 2.75
2089 2186 3.920231 ATATTCTTGCAGCAGTGGAGA 57.080 42.857 0.00 0.00 0.00 3.71
2090 2187 4.445453 TGTATATTCTTGCAGCAGTGGAG 58.555 43.478 0.00 0.00 0.00 3.86
2091 2188 4.486125 TGTATATTCTTGCAGCAGTGGA 57.514 40.909 0.00 0.00 0.00 4.02
2092 2189 4.818005 TCATGTATATTCTTGCAGCAGTGG 59.182 41.667 0.00 0.00 0.00 4.00
2093 2190 5.996669 TCATGTATATTCTTGCAGCAGTG 57.003 39.130 0.00 0.00 0.00 3.66
2094 2191 7.283807 TCAAATCATGTATATTCTTGCAGCAGT 59.716 33.333 0.00 0.00 0.00 4.40
2095 2192 7.645402 TCAAATCATGTATATTCTTGCAGCAG 58.355 34.615 0.00 0.00 0.00 4.24
2096 2193 7.571080 TCAAATCATGTATATTCTTGCAGCA 57.429 32.000 0.00 0.00 0.00 4.41
2108 2205 9.346005 TGCTGATGTTCTATTCAAATCATGTAT 57.654 29.630 0.00 0.00 0.00 2.29
2109 2206 8.735692 TGCTGATGTTCTATTCAAATCATGTA 57.264 30.769 0.00 0.00 0.00 2.29
2110 2207 7.201794 CCTGCTGATGTTCTATTCAAATCATGT 60.202 37.037 0.00 0.00 0.00 3.21
2111 2208 7.139392 CCTGCTGATGTTCTATTCAAATCATG 58.861 38.462 0.00 0.00 0.00 3.07
2112 2209 6.832384 ACCTGCTGATGTTCTATTCAAATCAT 59.168 34.615 0.00 0.00 0.00 2.45
2113 2210 6.182627 ACCTGCTGATGTTCTATTCAAATCA 58.817 36.000 0.00 0.00 0.00 2.57
2114 2211 6.690194 ACCTGCTGATGTTCTATTCAAATC 57.310 37.500 0.00 0.00 0.00 2.17
2115 2212 7.472334 AAACCTGCTGATGTTCTATTCAAAT 57.528 32.000 0.00 0.00 0.00 2.32
2116 2213 6.899393 AAACCTGCTGATGTTCTATTCAAA 57.101 33.333 0.00 0.00 0.00 2.69
2117 2214 7.394016 TCTAAACCTGCTGATGTTCTATTCAA 58.606 34.615 0.00 0.00 0.00 2.69
2118 2215 6.946340 TCTAAACCTGCTGATGTTCTATTCA 58.054 36.000 0.00 0.00 0.00 2.57
2119 2216 7.041508 CCATCTAAACCTGCTGATGTTCTATTC 60.042 40.741 0.00 0.00 35.76 1.75
2120 2217 6.769822 CCATCTAAACCTGCTGATGTTCTATT 59.230 38.462 0.00 0.00 35.76 1.73
2121 2218 6.294473 CCATCTAAACCTGCTGATGTTCTAT 58.706 40.000 0.00 0.00 35.76 1.98
2122 2219 5.396772 CCCATCTAAACCTGCTGATGTTCTA 60.397 44.000 0.00 0.00 35.76 2.10
2123 2220 4.521146 CCATCTAAACCTGCTGATGTTCT 58.479 43.478 0.00 0.00 35.76 3.01
2124 2221 3.629398 CCCATCTAAACCTGCTGATGTTC 59.371 47.826 0.00 0.00 35.76 3.18
2125 2222 3.266772 TCCCATCTAAACCTGCTGATGTT 59.733 43.478 0.00 0.00 35.76 2.71
2126 2223 2.846206 TCCCATCTAAACCTGCTGATGT 59.154 45.455 0.00 0.00 35.76 3.06
2127 2224 3.565764 TCCCATCTAAACCTGCTGATG 57.434 47.619 0.00 0.00 36.87 3.07
2128 2225 3.117738 CCTTCCCATCTAAACCTGCTGAT 60.118 47.826 0.00 0.00 0.00 2.90
2129 2226 2.239654 CCTTCCCATCTAAACCTGCTGA 59.760 50.000 0.00 0.00 0.00 4.26
2130 2227 2.025887 ACCTTCCCATCTAAACCTGCTG 60.026 50.000 0.00 0.00 0.00 4.41
2131 2228 2.279173 ACCTTCCCATCTAAACCTGCT 58.721 47.619 0.00 0.00 0.00 4.24
2132 2229 2.808906 ACCTTCCCATCTAAACCTGC 57.191 50.000 0.00 0.00 0.00 4.85
2133 2230 3.456277 AGCTACCTTCCCATCTAAACCTG 59.544 47.826 0.00 0.00 0.00 4.00
2134 2231 3.456277 CAGCTACCTTCCCATCTAAACCT 59.544 47.826 0.00 0.00 0.00 3.50
2135 2232 3.200165 ACAGCTACCTTCCCATCTAAACC 59.800 47.826 0.00 0.00 0.00 3.27
2136 2233 4.489306 ACAGCTACCTTCCCATCTAAAC 57.511 45.455 0.00 0.00 0.00 2.01
2137 2234 5.027460 TGTACAGCTACCTTCCCATCTAAA 58.973 41.667 0.00 0.00 0.00 1.85
2138 2235 4.616553 TGTACAGCTACCTTCCCATCTAA 58.383 43.478 0.00 0.00 0.00 2.10
2139 2236 4.259933 TGTACAGCTACCTTCCCATCTA 57.740 45.455 0.00 0.00 0.00 1.98
2140 2237 3.116096 TGTACAGCTACCTTCCCATCT 57.884 47.619 0.00 0.00 0.00 2.90
2141 2238 4.589374 AGTATGTACAGCTACCTTCCCATC 59.411 45.833 0.33 0.00 0.00 3.51
2142 2239 4.557705 AGTATGTACAGCTACCTTCCCAT 58.442 43.478 0.33 0.00 0.00 4.00
2143 2240 3.958798 GAGTATGTACAGCTACCTTCCCA 59.041 47.826 0.33 0.00 0.00 4.37
2144 2241 3.321396 GGAGTATGTACAGCTACCTTCCC 59.679 52.174 0.33 0.00 0.00 3.97
2145 2242 3.004524 CGGAGTATGTACAGCTACCTTCC 59.995 52.174 0.33 3.70 0.00 3.46
2146 2243 3.550436 GCGGAGTATGTACAGCTACCTTC 60.550 52.174 0.33 0.00 0.00 3.46
2147 2244 2.361438 GCGGAGTATGTACAGCTACCTT 59.639 50.000 0.33 0.00 0.00 3.50
2148 2245 1.955080 GCGGAGTATGTACAGCTACCT 59.045 52.381 0.33 0.00 0.00 3.08
2149 2246 1.000496 GGCGGAGTATGTACAGCTACC 60.000 57.143 0.33 2.01 0.00 3.18
2150 2247 1.000496 GGGCGGAGTATGTACAGCTAC 60.000 57.143 0.33 2.02 0.00 3.58
2151 2248 1.325355 GGGCGGAGTATGTACAGCTA 58.675 55.000 0.33 0.00 0.00 3.32
2152 2249 0.686441 TGGGCGGAGTATGTACAGCT 60.686 55.000 0.33 1.76 0.00 4.24
2153 2250 0.393077 ATGGGCGGAGTATGTACAGC 59.607 55.000 0.33 0.00 0.00 4.40
2154 2251 1.000955 GGATGGGCGGAGTATGTACAG 59.999 57.143 0.33 0.00 0.00 2.74
2155 2252 1.045407 GGATGGGCGGAGTATGTACA 58.955 55.000 0.00 0.00 0.00 2.90
2156 2253 0.320697 GGGATGGGCGGAGTATGTAC 59.679 60.000 0.00 0.00 0.00 2.90
2157 2254 1.183030 CGGGATGGGCGGAGTATGTA 61.183 60.000 0.00 0.00 0.00 2.29
2158 2255 2.507854 CGGGATGGGCGGAGTATGT 61.508 63.158 0.00 0.00 0.00 2.29
2159 2256 2.343758 CGGGATGGGCGGAGTATG 59.656 66.667 0.00 0.00 0.00 2.39
2171 2268 1.705873 ATAGACGAGCTTTCCGGGAT 58.294 50.000 0.00 0.00 0.00 3.85
2237 2334 5.991606 TGTCTCAAATTTATCTAGATGCGGG 59.008 40.000 15.79 0.68 0.00 6.13
2239 2336 9.941664 AATTTGTCTCAAATTTATCTAGATGCG 57.058 29.630 15.79 0.00 0.00 4.73
2548 4661 1.672356 GAGTCCGTTGTGCAGCCAT 60.672 57.895 0.00 0.00 0.00 4.40
2676 4802 2.193536 AACAAAGCACCGGTGGCTC 61.194 57.895 34.58 18.94 41.66 4.70
2684 4810 0.595825 GCAGAGCACAACAAAGCACC 60.596 55.000 0.00 0.00 0.00 5.01
2746 4876 8.046294 TGATGTGTTTTATTATTACAGCCGTT 57.954 30.769 0.00 0.00 0.00 4.44
2876 7233 3.391296 TCTCTGCCCCATAATGTAAGACC 59.609 47.826 0.00 0.00 0.00 3.85
2877 7234 4.345257 TCTCTCTGCCCCATAATGTAAGAC 59.655 45.833 0.00 0.00 0.00 3.01
2892 7249 8.215926 TCTACAAAGACTTATACTCTCTCTGC 57.784 38.462 0.00 0.00 0.00 4.26
2916 7275 3.309682 CGTGTGTGGTCCATGATAATGTC 59.690 47.826 0.00 0.00 0.00 3.06
2918 7277 2.613595 CCGTGTGTGGTCCATGATAATG 59.386 50.000 0.00 0.00 0.00 1.90
2924 7285 0.321564 ACATCCGTGTGTGGTCCATG 60.322 55.000 0.00 0.00 37.14 3.66
2926 7287 1.271856 ATACATCCGTGTGTGGTCCA 58.728 50.000 0.00 0.00 39.39 4.02
2929 7290 5.566826 GCATCTATATACATCCGTGTGTGGT 60.567 44.000 0.66 0.00 39.39 4.16
2935 7296 7.761249 TCTGAAATGCATCTATATACATCCGTG 59.239 37.037 0.00 0.00 0.00 4.94
2939 7300 9.650539 ACACTCTGAAATGCATCTATATACATC 57.349 33.333 0.00 0.00 0.00 3.06
2958 7319 8.261492 AGCAAAATGAGTAAATCTACACTCTG 57.739 34.615 3.65 0.00 41.46 3.35
2964 7325 6.663944 ACGGAGCAAAATGAGTAAATCTAC 57.336 37.500 0.00 0.00 0.00 2.59
2971 7332 9.990360 TGAATTATATACGGAGCAAAATGAGTA 57.010 29.630 0.00 0.00 0.00 2.59
3012 7373 8.827677 CCCTCCGTTCTTAAATATAAGTCTTTG 58.172 37.037 0.00 0.00 39.65 2.77
3016 7377 7.724287 ACTCCCTCCGTTCTTAAATATAAGTC 58.276 38.462 0.00 0.00 39.65 3.01
3028 7389 2.016096 GCGTAGTACTCCCTCCGTTCT 61.016 57.143 0.00 0.00 0.00 3.01
3029 7390 0.380024 GCGTAGTACTCCCTCCGTTC 59.620 60.000 0.00 0.00 0.00 3.95
3037 7398 6.040878 ACATAATTCTTGTGCGTAGTACTCC 58.959 40.000 0.00 0.00 45.46 3.85
3046 7407 5.505286 GGATGAGAACATAATTCTTGTGCG 58.495 41.667 0.00 0.00 36.82 5.34
3179 7549 0.960364 ATGCGTTTCCGGATGCAAGT 60.960 50.000 24.52 11.09 43.95 3.16
3187 7557 1.737236 TCAGATCAAATGCGTTTCCGG 59.263 47.619 0.00 0.00 33.68 5.14
3324 7694 4.883585 CCTAAAGCAGCTGATATCCAACAA 59.116 41.667 20.43 0.00 0.00 2.83
3325 7695 4.164030 TCCTAAAGCAGCTGATATCCAACA 59.836 41.667 20.43 0.00 0.00 3.33
3326 7696 4.708177 TCCTAAAGCAGCTGATATCCAAC 58.292 43.478 20.43 0.00 0.00 3.77
3502 7872 2.161609 CCCAATCACCGTAAAACAGCTC 59.838 50.000 0.00 0.00 0.00 4.09
3503 7873 2.159382 CCCAATCACCGTAAAACAGCT 58.841 47.619 0.00 0.00 0.00 4.24
3504 7874 1.883926 ACCCAATCACCGTAAAACAGC 59.116 47.619 0.00 0.00 0.00 4.40
3505 7875 4.758165 ACTAACCCAATCACCGTAAAACAG 59.242 41.667 0.00 0.00 0.00 3.16
3506 7876 4.716794 ACTAACCCAATCACCGTAAAACA 58.283 39.130 0.00 0.00 0.00 2.83
3507 7877 5.934043 AGTACTAACCCAATCACCGTAAAAC 59.066 40.000 0.00 0.00 0.00 2.43
3508 7878 6.112927 AGTACTAACCCAATCACCGTAAAA 57.887 37.500 0.00 0.00 0.00 1.52
3509 7879 5.622007 CGAGTACTAACCCAATCACCGTAAA 60.622 44.000 0.00 0.00 0.00 2.01
3510 7880 4.142403 CGAGTACTAACCCAATCACCGTAA 60.142 45.833 0.00 0.00 0.00 3.18
3511 7881 3.378112 CGAGTACTAACCCAATCACCGTA 59.622 47.826 0.00 0.00 0.00 4.02
3512 7882 2.165030 CGAGTACTAACCCAATCACCGT 59.835 50.000 0.00 0.00 0.00 4.83
3513 7883 2.480759 CCGAGTACTAACCCAATCACCG 60.481 54.545 0.00 0.00 0.00 4.94
3514 7884 2.762327 TCCGAGTACTAACCCAATCACC 59.238 50.000 0.00 0.00 0.00 4.02
3515 7885 3.446516 ACTCCGAGTACTAACCCAATCAC 59.553 47.826 0.00 0.00 0.00 3.06
3516 7886 3.705051 ACTCCGAGTACTAACCCAATCA 58.295 45.455 0.00 0.00 0.00 2.57
3517 7887 5.180367 GTACTCCGAGTACTAACCCAATC 57.820 47.826 25.39 1.57 45.70 2.67
3537 7907 7.933215 TCAGACATGTAAGTACTGCTAAGTA 57.067 36.000 0.00 0.00 37.88 2.24
3538 7908 6.835819 TCAGACATGTAAGTACTGCTAAGT 57.164 37.500 0.00 0.00 40.67 2.24
3539 7909 7.433719 GTGATCAGACATGTAAGTACTGCTAAG 59.566 40.741 0.00 0.00 0.00 2.18
3540 7910 7.258441 GTGATCAGACATGTAAGTACTGCTAA 58.742 38.462 0.00 0.00 0.00 3.09
3541 7911 6.458342 CGTGATCAGACATGTAAGTACTGCTA 60.458 42.308 0.00 0.00 0.00 3.49
3542 7912 5.655488 GTGATCAGACATGTAAGTACTGCT 58.345 41.667 0.00 0.00 0.00 4.24
3543 7913 4.500837 CGTGATCAGACATGTAAGTACTGC 59.499 45.833 0.00 0.00 0.00 4.40
3544 7914 5.641709 ACGTGATCAGACATGTAAGTACTG 58.358 41.667 0.00 1.24 38.10 2.74
3545 7915 5.648526 AGACGTGATCAGACATGTAAGTACT 59.351 40.000 0.00 0.00 39.65 2.73
3546 7916 5.739630 CAGACGTGATCAGACATGTAAGTAC 59.260 44.000 0.00 0.00 39.65 2.73
3547 7917 5.646360 TCAGACGTGATCAGACATGTAAGTA 59.354 40.000 0.00 0.00 39.65 2.24
3548 7918 4.459337 TCAGACGTGATCAGACATGTAAGT 59.541 41.667 0.00 0.00 39.65 2.24
3549 7919 4.986622 TCAGACGTGATCAGACATGTAAG 58.013 43.478 0.00 0.00 39.65 2.34
3550 7920 5.582689 ATCAGACGTGATCAGACATGTAA 57.417 39.130 0.00 0.00 39.37 2.41
3551 7921 5.582689 AATCAGACGTGATCAGACATGTA 57.417 39.130 0.00 0.00 43.04 2.29
3552 7922 4.462508 AATCAGACGTGATCAGACATGT 57.537 40.909 0.00 0.00 43.04 3.21
3553 7923 5.791367 AAAATCAGACGTGATCAGACATG 57.209 39.130 0.00 0.00 43.04 3.21
3554 7924 8.498054 AATAAAAATCAGACGTGATCAGACAT 57.502 30.769 0.00 0.00 43.04 3.06
3555 7925 7.905604 AATAAAAATCAGACGTGATCAGACA 57.094 32.000 0.00 0.00 43.04 3.41
3556 7926 8.058915 GCTAATAAAAATCAGACGTGATCAGAC 58.941 37.037 0.00 0.00 43.04 3.51
3557 7927 7.224753 GGCTAATAAAAATCAGACGTGATCAGA 59.775 37.037 0.00 0.00 43.04 3.27
3558 7928 7.348201 GGCTAATAAAAATCAGACGTGATCAG 58.652 38.462 0.00 0.00 43.04 2.90
3559 7929 6.019075 CGGCTAATAAAAATCAGACGTGATCA 60.019 38.462 0.00 0.00 43.04 2.92
3560 7930 6.355638 CGGCTAATAAAAATCAGACGTGATC 58.644 40.000 0.00 0.00 43.04 2.92
3561 7931 6.287107 CGGCTAATAAAAATCAGACGTGAT 57.713 37.500 0.00 0.00 46.01 3.06
3562 7932 5.712217 CGGCTAATAAAAATCAGACGTGA 57.288 39.130 0.00 0.00 34.82 4.35
3565 7935 5.518847 TCTGACGGCTAATAAAAATCAGACG 59.481 40.000 0.00 0.00 45.07 4.18
3566 7936 6.903883 TCTGACGGCTAATAAAAATCAGAC 57.096 37.500 0.00 0.00 36.94 3.51
3567 7937 7.500992 AGATCTGACGGCTAATAAAAATCAGA 58.499 34.615 0.00 3.72 43.69 3.27
3568 7938 7.721286 AGATCTGACGGCTAATAAAAATCAG 57.279 36.000 0.00 0.00 34.68 2.90
3569 7939 7.467267 GCAAGATCTGACGGCTAATAAAAATCA 60.467 37.037 0.00 0.00 0.00 2.57
3570 7940 6.853362 GCAAGATCTGACGGCTAATAAAAATC 59.147 38.462 0.00 0.00 0.00 2.17
3571 7941 6.511767 CGCAAGATCTGACGGCTAATAAAAAT 60.512 38.462 9.25 0.00 43.02 1.82
3572 7942 5.220586 CGCAAGATCTGACGGCTAATAAAAA 60.221 40.000 9.25 0.00 43.02 1.94
3573 7943 4.270084 CGCAAGATCTGACGGCTAATAAAA 59.730 41.667 9.25 0.00 43.02 1.52
3574 7944 3.802139 CGCAAGATCTGACGGCTAATAAA 59.198 43.478 9.25 0.00 43.02 1.40
3575 7945 3.381045 CGCAAGATCTGACGGCTAATAA 58.619 45.455 9.25 0.00 43.02 1.40
3576 7946 2.288213 CCGCAAGATCTGACGGCTAATA 60.288 50.000 20.12 0.00 37.71 0.98
3577 7947 1.539065 CCGCAAGATCTGACGGCTAAT 60.539 52.381 20.12 0.00 37.71 1.73
3578 7948 0.179111 CCGCAAGATCTGACGGCTAA 60.179 55.000 20.12 0.00 37.71 3.09
3579 7949 1.437573 CCGCAAGATCTGACGGCTA 59.562 57.895 20.12 0.00 37.71 3.93
3580 7950 2.185350 CCGCAAGATCTGACGGCT 59.815 61.111 20.12 0.00 37.71 5.52
3581 7951 2.892425 CCCGCAAGATCTGACGGC 60.892 66.667 24.46 13.07 40.94 5.68
3582 7952 2.202932 CCCCGCAAGATCTGACGG 60.203 66.667 23.41 23.41 41.53 4.79
3583 7953 0.179073 ATTCCCCGCAAGATCTGACG 60.179 55.000 9.99 9.99 43.02 4.35
3584 7954 2.044123 AATTCCCCGCAAGATCTGAC 57.956 50.000 0.00 0.00 43.02 3.51
3585 7955 2.806945 AAATTCCCCGCAAGATCTGA 57.193 45.000 0.00 0.00 43.02 3.27
3586 7956 4.981806 TTAAAATTCCCCGCAAGATCTG 57.018 40.909 0.00 0.00 43.02 2.90
3587 7957 5.656416 TCAATTAAAATTCCCCGCAAGATCT 59.344 36.000 0.00 0.00 43.02 2.75
3588 7958 5.901552 TCAATTAAAATTCCCCGCAAGATC 58.098 37.500 0.00 0.00 43.02 2.75
3589 7959 5.930837 TCAATTAAAATTCCCCGCAAGAT 57.069 34.783 0.00 0.00 43.02 2.40
3590 7960 5.930837 ATCAATTAAAATTCCCCGCAAGA 57.069 34.783 0.00 0.00 43.02 3.02
3591 7961 8.485976 TTTAATCAATTAAAATTCCCCGCAAG 57.514 30.769 5.64 0.00 38.77 4.01
3592 7962 9.454859 AATTTAATCAATTAAAATTCCCCGCAA 57.545 25.926 10.93 0.00 43.16 4.85
3593 7963 9.454859 AAATTTAATCAATTAAAATTCCCCGCA 57.545 25.926 10.93 0.00 43.16 5.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.