Multiple sequence alignment - TraesCS6A01G104000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G104000 chr6A 100.000 7025 0 0 1 7025 73297531 73304555 0.000000e+00 12973.0
1 TraesCS6A01G104000 chr6A 100.000 67 0 0 6305 6371 73303772 73303838 2.660000e-24 124.0
2 TraesCS6A01G104000 chr6A 100.000 67 0 0 6242 6308 73303835 73303901 2.660000e-24 124.0
3 TraesCS6A01G104000 chr6A 92.857 42 3 0 6049 6090 601467103 601467144 2.120000e-05 62.1
4 TraesCS6A01G104000 chr6B 95.198 3769 126 20 2407 6164 130075383 130079107 0.000000e+00 5906.0
5 TraesCS6A01G104000 chr6B 92.320 1224 60 21 746 1957 130073487 130074688 0.000000e+00 1709.0
6 TraesCS6A01G104000 chr6B 93.995 433 25 1 1978 2409 130074794 130075226 0.000000e+00 654.0
7 TraesCS6A01G104000 chr6B 91.808 354 27 2 6672 7025 130090146 130090497 6.330000e-135 492.0
8 TraesCS6A01G104000 chr6B 78.726 691 138 8 1 686 430868042 430868728 2.990000e-123 453.0
9 TraesCS6A01G104000 chr6B 87.895 380 32 5 6305 6681 130079243 130079611 1.080000e-117 435.0
10 TraesCS6A01G104000 chr6D 95.687 3594 98 16 2407 5990 57999805 58003351 0.000000e+00 5725.0
11 TraesCS6A01G104000 chr6D 92.240 1134 47 14 837 1957 57998017 57999122 0.000000e+00 1568.0
12 TraesCS6A01G104000 chr6D 94.266 436 25 0 1974 2409 57999212 57999647 0.000000e+00 667.0
13 TraesCS6A01G104000 chr5B 98.694 689 9 0 1 689 576052272 576051584 0.000000e+00 1223.0
14 TraesCS6A01G104000 chr5B 98.694 689 8 1 1 689 707425915 707426602 0.000000e+00 1221.0
15 TraesCS6A01G104000 chr7B 98.113 689 13 0 1 689 666681967 666681279 0.000000e+00 1201.0
16 TraesCS6A01G104000 chr7B 78.955 689 140 5 1 686 533381084 533381770 1.380000e-126 464.0
17 TraesCS6A01G104000 chr7B 97.727 44 1 0 6046 6089 104747578 104747621 7.560000e-10 76.8
18 TraesCS6A01G104000 chr2B 79.971 694 130 7 1 689 789577851 789577162 2.920000e-138 503.0
19 TraesCS6A01G104000 chr2B 79.971 694 130 7 1 689 789589309 789588620 2.920000e-138 503.0
20 TraesCS6A01G104000 chr2B 79.365 693 136 6 1 689 789597732 789597043 1.370000e-131 481.0
21 TraesCS6A01G104000 chr2B 78.841 690 138 8 1 686 754626447 754625762 6.420000e-125 459.0
22 TraesCS6A01G104000 chr2B 93.182 44 3 0 6046 6089 424907076 424907119 1.640000e-06 65.8
23 TraesCS6A01G104000 chr2B 92.683 41 3 0 6046 6086 757361043 757361003 7.610000e-05 60.2
24 TraesCS6A01G104000 chr7D 87.500 120 14 1 5085 5203 242788000 242788119 3.420000e-28 137.0
25 TraesCS6A01G104000 chr7D 92.771 83 4 1 5123 5203 41916928 41916846 1.240000e-22 119.0
26 TraesCS6A01G104000 chr7D 92.771 83 4 1 5123 5203 42212707 42212789 1.240000e-22 119.0
27 TraesCS6A01G104000 chr7D 92.771 83 4 1 5123 5203 567986981 567987063 1.240000e-22 119.0
28 TraesCS6A01G104000 chr7D 94.737 38 2 0 6052 6089 178490048 178490011 7.610000e-05 60.2
29 TraesCS6A01G104000 chr3D 90.722 97 7 1 5109 5203 537914912 537915008 2.060000e-25 128.0
30 TraesCS6A01G104000 chr1A 93.671 79 3 1 5126 5202 23967731 23967653 4.450000e-22 117.0
31 TraesCS6A01G104000 chr2D 86.316 95 11 1 5111 5203 13948664 13948758 1.250000e-17 102.0
32 TraesCS6A01G104000 chr5A 97.619 42 1 0 6046 6087 495925693 495925734 9.770000e-09 73.1
33 TraesCS6A01G104000 chr1B 91.667 48 4 0 6042 6089 1291893 1291846 4.550000e-07 67.6
34 TraesCS6A01G104000 chr3B 93.182 44 2 1 6047 6090 693472331 693472289 5.880000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G104000 chr6A 73297531 73304555 7024 False 4407.000000 12973 100.000000 1 7025 3 chr6A.!!$F2 7024
1 TraesCS6A01G104000 chr6B 130073487 130079611 6124 False 2176.000000 5906 92.352000 746 6681 4 chr6B.!!$F3 5935
2 TraesCS6A01G104000 chr6B 430868042 430868728 686 False 453.000000 453 78.726000 1 686 1 chr6B.!!$F2 685
3 TraesCS6A01G104000 chr6D 57998017 58003351 5334 False 2653.333333 5725 94.064333 837 5990 3 chr6D.!!$F1 5153
4 TraesCS6A01G104000 chr5B 576051584 576052272 688 True 1223.000000 1223 98.694000 1 689 1 chr5B.!!$R1 688
5 TraesCS6A01G104000 chr5B 707425915 707426602 687 False 1221.000000 1221 98.694000 1 689 1 chr5B.!!$F1 688
6 TraesCS6A01G104000 chr7B 666681279 666681967 688 True 1201.000000 1201 98.113000 1 689 1 chr7B.!!$R1 688
7 TraesCS6A01G104000 chr7B 533381084 533381770 686 False 464.000000 464 78.955000 1 686 1 chr7B.!!$F2 685
8 TraesCS6A01G104000 chr2B 789577162 789577851 689 True 503.000000 503 79.971000 1 689 1 chr2B.!!$R3 688
9 TraesCS6A01G104000 chr2B 789588620 789589309 689 True 503.000000 503 79.971000 1 689 1 chr2B.!!$R4 688
10 TraesCS6A01G104000 chr2B 789597043 789597732 689 True 481.000000 481 79.365000 1 689 1 chr2B.!!$R5 688
11 TraesCS6A01G104000 chr2B 754625762 754626447 685 True 459.000000 459 78.841000 1 686 1 chr2B.!!$R1 685

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
797 799 0.249699 CAACACCATATAGGCGGCGA 60.250 55.000 12.98 0.00 43.14 5.54 F
798 800 0.685097 AACACCATATAGGCGGCGAT 59.315 50.000 12.98 9.92 43.14 4.58 F
1660 1674 1.101331 GGCTTTGATTCAGGAGCTGG 58.899 55.000 17.97 0.00 35.53 4.85 F
3209 3472 0.459237 CTGCAGTGAAGAGTAGGGCG 60.459 60.000 5.25 0.00 0.00 6.13 F
4264 4530 0.179089 TTGTGTTTGTGTGCCCATGC 60.179 50.000 0.00 0.00 38.26 4.06 F
5581 5855 1.005630 AGACAACAGTGAGCGAGCC 60.006 57.895 0.00 0.00 0.00 4.70 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2322 2423 1.963515 GTTCCTGGAGCACAACCAAAT 59.036 47.619 5.59 0.0 36.95 2.32 R
2551 2812 2.766736 TCCCCATTACCGTACCAAGAT 58.233 47.619 0.00 0.0 0.00 2.40 R
3598 3861 0.106708 TGACTGTTGTGGTCTCTGGC 59.893 55.000 0.00 0.0 35.04 4.85 R
5098 5372 1.404986 CGACAAGTAATCAGGGCGGAA 60.405 52.381 0.00 0.0 0.00 4.30 R
5762 6038 0.250338 AGAACACCTTTGACCTCGGC 60.250 55.000 0.00 0.0 0.00 5.54 R
6743 7081 0.029834 GATTGCAATGCTGGTAGCCG 59.970 55.000 18.59 0.0 41.51 5.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 1.079057 GACTTTCCGAGTGGGGCTC 60.079 63.158 0.00 0.00 39.19 4.70
675 677 3.576982 CCTAGTCTCCACAGGTGTACAAA 59.423 47.826 0.00 0.00 0.00 2.83
717 719 9.457436 TTTTTAGTAACAGAAGGGGATAATCAC 57.543 33.333 0.00 0.00 0.00 3.06
718 720 5.632034 AGTAACAGAAGGGGATAATCACC 57.368 43.478 0.00 0.00 41.37 4.02
748 750 9.695155 TTTTAGAATTAGAAGGGGATAGTTTGG 57.305 33.333 0.00 0.00 0.00 3.28
749 751 6.910259 AGAATTAGAAGGGGATAGTTTGGT 57.090 37.500 0.00 0.00 0.00 3.67
759 761 3.193479 GGGATAGTTTGGTGGCAAAAGAG 59.807 47.826 0.00 0.00 0.00 2.85
768 770 3.384467 TGGTGGCAAAAGAGGAAAGAAAG 59.616 43.478 0.00 0.00 0.00 2.62
789 791 0.922626 TGGGCCTGCAACACCATATA 59.077 50.000 4.53 0.00 0.00 0.86
797 799 0.249699 CAACACCATATAGGCGGCGA 60.250 55.000 12.98 0.00 43.14 5.54
798 800 0.685097 AACACCATATAGGCGGCGAT 59.315 50.000 12.98 9.92 43.14 4.58
799 801 1.552578 ACACCATATAGGCGGCGATA 58.447 50.000 12.98 13.89 43.14 2.92
835 837 2.354604 GGCCACTCTCTCAAAGAAGAGG 60.355 54.545 0.00 1.71 42.58 3.69
885 887 7.530435 TCTTTCCAGAGACATCTATCTATCCA 58.470 38.462 0.00 0.00 33.22 3.41
886 888 8.176105 TCTTTCCAGAGACATCTATCTATCCAT 58.824 37.037 0.00 0.00 33.22 3.41
887 889 7.953005 TTCCAGAGACATCTATCTATCCATC 57.047 40.000 0.00 0.00 33.22 3.51
888 890 6.430864 TCCAGAGACATCTATCTATCCATCC 58.569 44.000 0.00 0.00 33.22 3.51
889 891 6.011274 TCCAGAGACATCTATCTATCCATCCA 60.011 42.308 0.00 0.00 33.22 3.41
926 928 2.546778 ACGTCACGTCATGTCAGTTTT 58.453 42.857 0.00 0.00 33.69 2.43
1039 1041 3.423154 CCGACCCAACGAAGCAGC 61.423 66.667 0.00 0.00 35.09 5.25
1040 1042 3.423154 CGACCCAACGAAGCAGCC 61.423 66.667 0.00 0.00 35.09 4.85
1041 1043 3.056328 GACCCAACGAAGCAGCCC 61.056 66.667 0.00 0.00 0.00 5.19
1042 1044 3.553095 GACCCAACGAAGCAGCCCT 62.553 63.158 0.00 0.00 0.00 5.19
1043 1045 2.282462 CCCAACGAAGCAGCCCTT 60.282 61.111 0.00 0.00 36.19 3.95
1196 1208 2.506438 CTCCCCGCGACGACTTTC 60.506 66.667 8.23 0.00 0.00 2.62
1660 1674 1.101331 GGCTTTGATTCAGGAGCTGG 58.899 55.000 17.97 0.00 35.53 4.85
1666 1680 1.965754 GATTCAGGAGCTGGGACGCT 61.966 60.000 0.00 0.00 40.42 5.07
1746 1760 6.765915 AATCCAAGCTTCTAACTCCATTTC 57.234 37.500 0.00 0.00 0.00 2.17
1760 1774 7.730364 AACTCCATTTCAGTACTACTGTTTG 57.270 36.000 14.63 10.75 46.03 2.93
1779 1793 8.417106 ACTGTTTGTGTATCTATCATCTGTAGG 58.583 37.037 0.00 0.00 0.00 3.18
1786 1800 3.161067 TCTATCATCTGTAGGAGCAGCC 58.839 50.000 0.00 0.00 36.49 4.85
1800 1814 2.945668 GAGCAGCCGGAATCATAGTTTT 59.054 45.455 5.05 0.00 0.00 2.43
1813 1827 9.784531 GGAATCATAGTTTTCTGGATATTCTGA 57.215 33.333 0.00 0.00 0.00 3.27
1869 1884 5.822519 TGTAAAGCAGGAACTATAGCCATTG 59.177 40.000 0.00 0.00 36.02 2.82
1967 2037 5.123820 TGTTTCTGCATCTAAACATGTAGGC 59.876 40.000 14.61 0.00 39.88 3.93
1972 2042 6.538742 TCTGCATCTAAACATGTAGGCTTAAC 59.461 38.462 0.00 0.00 37.17 2.01
2004 2105 6.016360 CCATTTCATTTGTGGTAGACTGACAA 60.016 38.462 0.00 0.00 0.00 3.18
2018 2119 7.115378 GGTAGACTGACAATGCATTTCTTTTTG 59.885 37.037 9.83 0.21 0.00 2.44
2020 2121 7.715657 AGACTGACAATGCATTTCTTTTTGTA 58.284 30.769 9.83 0.00 31.09 2.41
2105 2206 2.242708 AGATGAGTACGAGGAGGAAGGT 59.757 50.000 0.00 0.00 0.00 3.50
2301 2402 3.119743 TCTGAATTTCAATGCGCCTCTTG 60.120 43.478 4.18 6.53 0.00 3.02
2306 2407 2.177394 TCAATGCGCCTCTTGTACAA 57.823 45.000 4.18 8.28 0.00 2.41
2310 2411 4.697828 TCAATGCGCCTCTTGTACAATTTA 59.302 37.500 9.13 0.00 0.00 1.40
2312 2413 5.835113 ATGCGCCTCTTGTACAATTTATT 57.165 34.783 9.13 0.00 0.00 1.40
2313 2414 4.980590 TGCGCCTCTTGTACAATTTATTG 58.019 39.130 9.13 1.03 43.26 1.90
2378 2479 9.020731 GTAGAAAAATACAATTCTGGGAGGAAA 57.979 33.333 0.00 0.00 36.59 3.13
2384 2485 9.547279 AAATACAATTCTGGGAGGAAAATAGTT 57.453 29.630 0.00 0.00 0.00 2.24
2395 2496 6.381133 GGGAGGAAAATAGTTGGACAATGATT 59.619 38.462 0.00 0.00 0.00 2.57
2403 2504 4.256920 AGTTGGACAATGATTCCTTCTCG 58.743 43.478 0.00 0.00 33.84 4.04
2419 2680 6.839454 TCCTTCTCGTATACCTTCTATCAGT 58.161 40.000 0.00 0.00 0.00 3.41
2420 2681 7.288560 TCCTTCTCGTATACCTTCTATCAGTT 58.711 38.462 0.00 0.00 0.00 3.16
2485 2746 7.277098 TGGAACTGCGAAGTTATCATACTAAAC 59.723 37.037 9.31 0.00 31.35 2.01
2510 2771 6.541278 CAGATTGTCATGCTATCCTTTCTTGA 59.459 38.462 7.53 0.00 31.17 3.02
2551 2812 8.148807 TCAAATTCAACATTTCGTCTTACTGA 57.851 30.769 0.00 0.00 0.00 3.41
2556 2817 7.351414 TCAACATTTCGTCTTACTGATCTTG 57.649 36.000 0.00 0.00 0.00 3.02
2560 2821 6.812160 ACATTTCGTCTTACTGATCTTGGTAC 59.188 38.462 0.00 0.00 0.00 3.34
2564 2825 4.333649 CGTCTTACTGATCTTGGTACGGTA 59.666 45.833 0.00 0.00 0.00 4.02
2574 2835 3.135167 TCTTGGTACGGTAATGGGGAATC 59.865 47.826 0.00 0.00 0.00 2.52
2578 2839 4.070009 GGTACGGTAATGGGGAATCAATC 58.930 47.826 0.00 0.00 0.00 2.67
2591 2852 9.833179 ATGGGGAATCAATCTTCATTATGTATT 57.167 29.630 0.00 0.00 0.00 1.89
2592 2853 9.300681 TGGGGAATCAATCTTCATTATGTATTC 57.699 33.333 0.00 0.00 0.00 1.75
2593 2854 9.300681 GGGGAATCAATCTTCATTATGTATTCA 57.699 33.333 0.00 0.00 0.00 2.57
2744 3005 7.161404 GGAGTATGTGGCATTACATCTCATTA 58.839 38.462 17.86 0.00 41.31 1.90
2783 3044 5.531287 CCATCCCTTACTAATTGCAGGTAAC 59.469 44.000 0.00 0.00 0.00 2.50
3063 3325 0.598065 CTCCAAGGGAAAAACCTGCG 59.402 55.000 0.00 0.00 40.87 5.18
3120 3382 7.480810 AGTTTGAACTTCTATTGCGAAACTTT 58.519 30.769 0.00 0.00 35.21 2.66
3136 3398 6.291112 GCGAAACTTTGTCTTTCTTGTTTAGC 60.291 38.462 0.00 0.00 38.22 3.09
3160 3422 2.624838 AGAGTGCTGATGGTTGGTTTTG 59.375 45.455 0.00 0.00 0.00 2.44
3180 3443 3.130633 TGTTGTGTCAAAGATCGTGAGG 58.869 45.455 2.70 0.00 0.00 3.86
3209 3472 0.459237 CTGCAGTGAAGAGTAGGGCG 60.459 60.000 5.25 0.00 0.00 6.13
3224 3487 4.043200 GCGCCAACAAGTCAGCCC 62.043 66.667 0.00 0.00 0.00 5.19
3247 3510 2.159014 CCAGATTGCCAAATGGTCATGG 60.159 50.000 0.71 1.96 39.80 3.66
3529 3792 3.056393 CCTGTGTTACCTAATGGTCGACA 60.056 47.826 18.91 3.91 44.78 4.35
3602 3865 3.559024 CAGTCGTTGCAGAGCCAG 58.441 61.111 0.00 0.00 0.00 4.85
3603 3866 1.005748 CAGTCGTTGCAGAGCCAGA 60.006 57.895 0.00 0.00 0.00 3.86
3604 3867 1.013005 CAGTCGTTGCAGAGCCAGAG 61.013 60.000 0.00 0.00 0.00 3.35
3605 3868 1.181741 AGTCGTTGCAGAGCCAGAGA 61.182 55.000 0.00 0.00 0.00 3.10
3606 3869 1.011451 GTCGTTGCAGAGCCAGAGAC 61.011 60.000 0.00 0.00 0.00 3.36
3607 3870 1.739562 CGTTGCAGAGCCAGAGACC 60.740 63.158 0.00 0.00 0.00 3.85
3608 3871 1.372683 GTTGCAGAGCCAGAGACCA 59.627 57.895 0.00 0.00 0.00 4.02
3609 3872 0.952984 GTTGCAGAGCCAGAGACCAC 60.953 60.000 0.00 0.00 0.00 4.16
3610 3873 1.410050 TTGCAGAGCCAGAGACCACA 61.410 55.000 0.00 0.00 0.00 4.17
3611 3874 1.372683 GCAGAGCCAGAGACCACAA 59.627 57.895 0.00 0.00 0.00 3.33
3612 3875 0.952984 GCAGAGCCAGAGACCACAAC 60.953 60.000 0.00 0.00 0.00 3.32
3613 3876 0.394192 CAGAGCCAGAGACCACAACA 59.606 55.000 0.00 0.00 0.00 3.33
3614 3877 0.683973 AGAGCCAGAGACCACAACAG 59.316 55.000 0.00 0.00 0.00 3.16
3615 3878 0.394565 GAGCCAGAGACCACAACAGT 59.605 55.000 0.00 0.00 0.00 3.55
3632 3895 1.227205 GTCATCGCAGAGCCAGAGG 60.227 63.158 0.00 0.00 43.63 3.69
3701 3964 3.226429 GAGGCCACAGCAGTCGTCA 62.226 63.158 5.01 0.00 42.56 4.35
3725 3988 2.433838 CAGAGGCCACTGCAGTCG 60.434 66.667 18.64 12.58 40.13 4.18
3811 4074 1.143838 AACTGCAGTCGTCACAGCA 59.856 52.632 21.95 0.00 42.36 4.41
4264 4530 0.179089 TTGTGTTTGTGTGCCCATGC 60.179 50.000 0.00 0.00 38.26 4.06
4404 4670 8.561738 TCAGGAGTATGTTCAGGTAAATTTTC 57.438 34.615 0.00 0.00 0.00 2.29
4412 4678 6.239396 TGTTCAGGTAAATTTTCATCCCGTA 58.761 36.000 0.00 0.00 0.00 4.02
4415 4681 5.878116 TCAGGTAAATTTTCATCCCGTACTG 59.122 40.000 0.00 0.00 0.00 2.74
4493 4764 8.965172 CGTCTGTGTATAGATTTGGTATACAAC 58.035 37.037 5.01 0.94 42.34 3.32
4646 4918 9.849166 GTTACATATTGCTTTAGTGGCTTTTTA 57.151 29.630 0.00 0.00 0.00 1.52
4870 5142 7.565450 TGTTCTTCACATAATGCATTTTTCG 57.435 32.000 18.75 6.40 0.00 3.46
5049 5323 5.669164 TTAGTTGGCAAAATATGTTCCCC 57.331 39.130 0.00 0.00 0.00 4.81
5071 5345 6.351626 CCCCTCGTTGGTTACTTTTAGTCTAT 60.352 42.308 0.00 0.00 0.00 1.98
5072 5346 7.147846 CCCCTCGTTGGTTACTTTTAGTCTATA 60.148 40.741 0.00 0.00 0.00 1.31
5224 5498 4.040095 GGGGAGTACTCAGTAAAGTGTGTT 59.960 45.833 23.91 0.00 0.00 3.32
5226 5500 5.452917 GGGAGTACTCAGTAAAGTGTGTTGT 60.453 44.000 23.91 0.00 0.00 3.32
5227 5501 5.462398 GGAGTACTCAGTAAAGTGTGTTGTG 59.538 44.000 23.91 0.00 0.00 3.33
5246 5520 2.738846 GTGCGACACACTTGAATGAGAT 59.261 45.455 5.30 0.00 46.41 2.75
5362 5636 4.291540 TGCTCTGTTGTTTGCTTACTTG 57.708 40.909 0.00 0.00 0.00 3.16
5413 5687 3.780173 GAGGAGCTCCGCCTGCTT 61.780 66.667 26.95 7.70 41.30 3.91
5550 5824 1.750399 CCTTCGGCTGGAATGTGGG 60.750 63.158 0.00 0.00 33.26 4.61
5581 5855 1.005630 AGACAACAGTGAGCGAGCC 60.006 57.895 0.00 0.00 0.00 4.70
5582 5856 1.005630 GACAACAGTGAGCGAGCCT 60.006 57.895 0.00 0.00 0.00 4.58
5601 5875 3.710722 CGAGCTCTGCCCCCAGTT 61.711 66.667 12.85 0.00 40.09 3.16
5612 5886 3.799755 CCCAGTTAAGCGCCGTGC 61.800 66.667 2.29 0.00 46.98 5.34
5633 5907 4.335082 CGTATTTCACGCCAAATCAGAA 57.665 40.909 0.00 0.00 45.03 3.02
5634 5908 4.717991 CGTATTTCACGCCAAATCAGAAA 58.282 39.130 0.00 0.00 45.03 2.52
5668 5943 2.887152 AGGCGAAAAGTTCTTGCAGATT 59.113 40.909 0.00 0.00 0.00 2.40
5675 5951 6.141369 CGAAAAGTTCTTGCAGATTTGAAGTC 59.859 38.462 0.00 0.00 0.00 3.01
5698 5974 3.576648 CTTGTAGACCGTTGAAGTCCTC 58.423 50.000 0.00 0.00 34.67 3.71
5716 5992 2.299297 CCTCGTGGGTTGTACTTCTTCT 59.701 50.000 0.00 0.00 0.00 2.85
5755 6031 1.523032 GTTCCCGGGCGTATTGAGG 60.523 63.158 18.49 0.00 0.00 3.86
5762 6038 0.874607 GGGCGTATTGAGGTAGTGCG 60.875 60.000 0.00 0.00 0.00 5.34
5765 6041 1.206745 CGTATTGAGGTAGTGCGCCG 61.207 60.000 4.18 0.00 0.00 6.46
5852 6129 7.966753 CCTGTTTTCTCATGATGTAACTGATTG 59.033 37.037 15.83 0.00 0.00 2.67
5855 6132 9.683069 GTTTTCTCATGATGTAACTGATTGTTT 57.317 29.630 0.00 0.00 39.89 2.83
6025 6304 7.343316 TCAGGATTGGAAAAGGAAAAAGTAACA 59.657 33.333 0.00 0.00 0.00 2.41
6046 6325 2.159085 AGACTTGATTGGCCGTACTAGC 60.159 50.000 0.00 0.00 0.00 3.42
6047 6326 1.553248 ACTTGATTGGCCGTACTAGCA 59.447 47.619 0.00 0.00 0.00 3.49
6050 6329 3.275617 TGATTGGCCGTACTAGCAAAT 57.724 42.857 6.99 6.99 36.56 2.32
6056 6335 2.629051 GCCGTACTAGCAAATCAACCT 58.371 47.619 0.00 0.00 0.00 3.50
6078 6357 4.108570 TGTGGTTGGATGGTTAGTAGGAT 58.891 43.478 0.00 0.00 0.00 3.24
6080 6359 5.365605 TGTGGTTGGATGGTTAGTAGGATAG 59.634 44.000 0.00 0.00 0.00 2.08
6083 6362 5.221661 GGTTGGATGGTTAGTAGGATAGTGG 60.222 48.000 0.00 0.00 0.00 4.00
6112 6391 7.394923 TCCTGGCCTTTATTTTAAGATTTTCGA 59.605 33.333 3.32 0.00 0.00 3.71
6113 6392 7.488150 CCTGGCCTTTATTTTAAGATTTTCGAC 59.512 37.037 3.32 0.00 0.00 4.20
6134 6413 3.190744 ACGATGCGTCTTCACTAAGAGAA 59.809 43.478 4.05 0.00 42.40 2.87
6143 6422 4.217983 TCTTCACTAAGAGAAGACGTTCCC 59.782 45.833 7.37 0.00 44.69 3.97
6146 6425 8.657383 CTTCACTAAGAGAAGACGTTCCCGTT 62.657 46.154 3.31 0.00 44.00 4.44
6164 6443 2.158449 CGTTGACTTTGAGGTGCTCATC 59.842 50.000 0.00 0.00 40.39 2.92
6165 6444 2.084610 TGACTTTGAGGTGCTCATCG 57.915 50.000 0.00 0.00 40.39 3.84
6168 6447 2.606725 GACTTTGAGGTGCTCATCGATG 59.393 50.000 19.61 19.61 40.39 3.84
6169 6448 1.329906 CTTTGAGGTGCTCATCGATGC 59.670 52.381 20.81 10.65 40.39 3.91
6175 6454 1.002366 GTGCTCATCGATGCGTCTTT 58.998 50.000 20.81 0.00 0.00 2.52
6176 6455 2.193447 GTGCTCATCGATGCGTCTTTA 58.807 47.619 20.81 0.36 0.00 1.85
6179 6458 4.444388 GTGCTCATCGATGCGTCTTTATTA 59.556 41.667 20.81 0.00 0.00 0.98
6180 6459 5.119279 GTGCTCATCGATGCGTCTTTATTAT 59.881 40.000 20.81 0.00 0.00 1.28
6181 6460 5.696270 TGCTCATCGATGCGTCTTTATTATT 59.304 36.000 20.81 0.00 0.00 1.40
6182 6461 6.011879 GCTCATCGATGCGTCTTTATTATTG 58.988 40.000 20.81 0.00 0.00 1.90
6184 6463 5.408299 TCATCGATGCGTCTTTATTATTGGG 59.592 40.000 20.81 0.00 0.00 4.12
6188 6467 5.465390 CGATGCGTCTTTATTATTGGGAGAA 59.535 40.000 4.05 0.00 0.00 2.87
6189 6468 6.147821 CGATGCGTCTTTATTATTGGGAGAAT 59.852 38.462 4.05 0.00 0.00 2.40
6190 6469 6.618287 TGCGTCTTTATTATTGGGAGAATG 57.382 37.500 0.00 0.00 0.00 2.67
6215 6552 9.087424 TGAGTGTATAATCATATATTTGAGCGC 57.913 33.333 0.00 0.00 0.00 5.92
6232 6569 1.798735 GCCTGCGTCTACGTCTGTA 59.201 57.895 4.24 0.00 42.22 2.74
6237 6574 2.846550 CTGCGTCTACGTCTGTATTGTG 59.153 50.000 4.24 0.00 42.22 3.33
6240 6577 3.671928 GCGTCTACGTCTGTATTGTGTTT 59.328 43.478 4.24 0.00 42.22 2.83
6268 6605 5.601583 AAATTGACCATATCAGCATGCAA 57.398 34.783 21.98 7.97 38.99 4.08
6285 6622 6.260714 AGCATGCAAATGTGAGACGATAAATA 59.739 34.615 21.98 0.00 0.00 1.40
6286 6623 6.576313 GCATGCAAATGTGAGACGATAAATAG 59.424 38.462 14.21 0.00 0.00 1.73
6287 6624 7.633621 CATGCAAATGTGAGACGATAAATAGT 58.366 34.615 0.00 0.00 0.00 2.12
6288 6625 7.234187 TGCAAATGTGAGACGATAAATAGTC 57.766 36.000 0.00 0.00 37.63 2.59
6290 6627 7.549134 TGCAAATGTGAGACGATAAATAGTCTT 59.451 33.333 7.10 0.00 46.52 3.01
6291 6628 8.391106 GCAAATGTGAGACGATAAATAGTCTTT 58.609 33.333 7.10 0.00 46.52 2.52
6330 6667 5.601583 AAAATTGACCATATCAGCATGCA 57.398 34.783 21.98 0.00 38.99 3.96
6331 6668 5.601583 AAATTGACCATATCAGCATGCAA 57.398 34.783 21.98 7.97 38.99 4.08
6332 6669 5.601583 AATTGACCATATCAGCATGCAAA 57.398 34.783 21.98 7.55 38.99 3.68
6333 6670 5.801531 ATTGACCATATCAGCATGCAAAT 57.198 34.783 21.98 14.76 38.99 2.32
6334 6671 4.577834 TGACCATATCAGCATGCAAATG 57.422 40.909 21.98 15.91 34.76 2.32
6335 6672 3.955551 TGACCATATCAGCATGCAAATGT 59.044 39.130 21.98 8.08 34.76 2.71
6336 6673 4.202070 TGACCATATCAGCATGCAAATGTG 60.202 41.667 21.98 18.80 34.76 3.21
6337 6674 3.955551 ACCATATCAGCATGCAAATGTGA 59.044 39.130 21.98 14.70 34.76 3.58
6338 6675 4.037565 ACCATATCAGCATGCAAATGTGAG 59.962 41.667 21.98 15.13 34.76 3.51
6339 6676 4.277423 CCATATCAGCATGCAAATGTGAGA 59.723 41.667 21.98 11.98 34.76 3.27
6340 6677 3.777465 ATCAGCATGCAAATGTGAGAC 57.223 42.857 21.98 0.00 34.76 3.36
6341 6678 1.465777 TCAGCATGCAAATGTGAGACG 59.534 47.619 21.98 0.00 34.76 4.18
6342 6679 1.465777 CAGCATGCAAATGTGAGACGA 59.534 47.619 21.98 0.00 0.00 4.20
6343 6680 2.096980 CAGCATGCAAATGTGAGACGAT 59.903 45.455 21.98 0.00 0.00 3.73
6344 6681 3.310501 CAGCATGCAAATGTGAGACGATA 59.689 43.478 21.98 0.00 0.00 2.92
6345 6682 3.940852 AGCATGCAAATGTGAGACGATAA 59.059 39.130 21.98 0.00 0.00 1.75
6351 6688 7.234187 TGCAAATGTGAGACGATAAATAGTC 57.766 36.000 0.00 0.00 37.63 2.59
6429 6767 2.997315 CCGGTCACTGGCCTCTCA 60.997 66.667 3.32 0.00 0.00 3.27
6454 6792 3.631250 GAAACCTGATCCAATAGCCCAA 58.369 45.455 0.00 0.00 0.00 4.12
6465 6803 3.257873 CCAATAGCCCAATGTTTCACACA 59.742 43.478 0.00 0.00 40.71 3.72
6467 6805 5.126869 CCAATAGCCCAATGTTTCACACATA 59.873 40.000 0.00 0.00 46.23 2.29
6468 6806 5.835113 ATAGCCCAATGTTTCACACATAC 57.165 39.130 0.00 0.00 46.23 2.39
6469 6807 3.495331 AGCCCAATGTTTCACACATACA 58.505 40.909 0.00 0.00 46.23 2.29
6470 6808 3.255642 AGCCCAATGTTTCACACATACAC 59.744 43.478 0.00 0.00 46.23 2.90
6471 6809 3.255642 GCCCAATGTTTCACACATACACT 59.744 43.478 0.00 0.00 46.23 3.55
6472 6810 4.797471 CCCAATGTTTCACACATACACTG 58.203 43.478 0.00 0.00 46.23 3.66
6479 6817 0.790207 CACACATACACTGACACCGC 59.210 55.000 0.00 0.00 0.00 5.68
6498 6836 2.028567 CGCTGTCTTTCTTCCTTCTCCT 60.029 50.000 0.00 0.00 0.00 3.69
6499 6837 3.193691 CGCTGTCTTTCTTCCTTCTCCTA 59.806 47.826 0.00 0.00 0.00 2.94
6509 6847 9.513906 CTTTCTTCCTTCTCCTATCTTCTTTTT 57.486 33.333 0.00 0.00 0.00 1.94
6562 6900 0.106149 CCTACTACGATTGCCCCACC 59.894 60.000 0.00 0.00 0.00 4.61
6577 6915 1.742768 CACCGTGCCCTCCTAGATC 59.257 63.158 0.00 0.00 0.00 2.75
6580 6918 1.528542 CGTGCCCTCCTAGATCCGA 60.529 63.158 0.00 0.00 0.00 4.55
6582 6920 0.755698 GTGCCCTCCTAGATCCGACA 60.756 60.000 0.00 0.00 0.00 4.35
6583 6921 0.188587 TGCCCTCCTAGATCCGACAT 59.811 55.000 0.00 0.00 0.00 3.06
6587 6925 2.555448 CCCTCCTAGATCCGACATGCTA 60.555 54.545 0.00 0.00 0.00 3.49
6596 6934 3.052455 TCCGACATGCTACATGTTGTT 57.948 42.857 20.93 0.00 32.80 2.83
6608 6946 1.464608 CATGTTGTTAGGGACGTGCAG 59.535 52.381 9.96 0.00 0.00 4.41
6611 6949 2.046009 TTGTTAGGGACGTGCAGCCA 62.046 55.000 9.96 0.00 0.00 4.75
6624 6962 0.736325 GCAGCCACGATACGAACACT 60.736 55.000 0.00 0.00 0.00 3.55
6625 6963 1.710013 CAGCCACGATACGAACACTT 58.290 50.000 0.00 0.00 0.00 3.16
6629 6967 2.668250 CCACGATACGAACACTTCACA 58.332 47.619 0.00 0.00 0.00 3.58
6668 7006 0.466124 CCATCCCGGAGAGGAAAGAC 59.534 60.000 0.73 0.00 45.00 3.01
6676 7014 1.268899 GGAGAGGAAAGACGACAACGA 59.731 52.381 0.00 0.00 42.66 3.85
6688 7026 4.459331 CAACGATGGCGGCGGTTG 62.459 66.667 20.12 20.12 43.17 3.77
6697 7035 4.728102 CGGCGGTTGCGGTACAGA 62.728 66.667 0.00 0.00 44.10 3.41
6698 7036 2.125269 GGCGGTTGCGGTACAGAT 60.125 61.111 0.00 0.00 44.10 2.90
6699 7037 2.461110 GGCGGTTGCGGTACAGATG 61.461 63.158 0.00 0.00 44.10 2.90
6700 7038 1.740296 GCGGTTGCGGTACAGATGT 60.740 57.895 0.00 0.00 0.00 3.06
6701 7039 1.966493 GCGGTTGCGGTACAGATGTG 61.966 60.000 0.00 0.00 0.00 3.21
6702 7040 1.358725 CGGTTGCGGTACAGATGTGG 61.359 60.000 0.00 0.00 0.00 4.17
6703 7041 0.321298 GGTTGCGGTACAGATGTGGT 60.321 55.000 0.00 0.00 0.00 4.16
6704 7042 0.796312 GTTGCGGTACAGATGTGGTG 59.204 55.000 0.00 0.00 0.00 4.17
6705 7043 0.321210 TTGCGGTACAGATGTGGTGG 60.321 55.000 0.00 0.00 0.00 4.61
6706 7044 2.106683 GCGGTACAGATGTGGTGGC 61.107 63.158 0.00 0.00 0.00 5.01
6707 7045 1.449601 CGGTACAGATGTGGTGGCC 60.450 63.158 0.00 0.00 0.00 5.36
6708 7046 1.077716 GGTACAGATGTGGTGGCCC 60.078 63.158 0.00 0.00 0.00 5.80
6709 7047 1.562672 GGTACAGATGTGGTGGCCCT 61.563 60.000 0.00 0.00 0.00 5.19
6710 7048 1.200519 GTACAGATGTGGTGGCCCTA 58.799 55.000 0.00 0.00 0.00 3.53
6711 7049 1.134491 GTACAGATGTGGTGGCCCTAC 60.134 57.143 0.00 0.00 0.00 3.18
6712 7050 1.153369 CAGATGTGGTGGCCCTACG 60.153 63.158 0.00 0.00 0.00 3.51
6713 7051 1.305802 AGATGTGGTGGCCCTACGA 60.306 57.895 0.00 0.00 0.00 3.43
6714 7052 1.153429 GATGTGGTGGCCCTACGAC 60.153 63.158 0.00 0.00 0.00 4.34
6715 7053 1.895020 GATGTGGTGGCCCTACGACA 61.895 60.000 12.45 12.45 42.18 4.35
6716 7054 1.899437 ATGTGGTGGCCCTACGACAG 61.899 60.000 14.79 0.00 41.47 3.51
6717 7055 3.000819 TGGTGGCCCTACGACAGG 61.001 66.667 0.00 0.00 45.07 4.00
6724 7062 2.264794 CCTACGACAGGGTGGTGC 59.735 66.667 0.00 0.00 41.26 5.01
6725 7063 2.283529 CCTACGACAGGGTGGTGCT 61.284 63.158 0.00 0.00 41.26 4.40
6726 7064 0.968901 CCTACGACAGGGTGGTGCTA 60.969 60.000 0.00 0.00 41.26 3.49
6727 7065 1.112113 CTACGACAGGGTGGTGCTAT 58.888 55.000 0.00 0.00 0.00 2.97
6728 7066 0.821517 TACGACAGGGTGGTGCTATG 59.178 55.000 0.00 0.00 0.00 2.23
6729 7067 1.815421 CGACAGGGTGGTGCTATGC 60.815 63.158 0.00 0.00 0.00 3.14
6730 7068 1.815421 GACAGGGTGGTGCTATGCG 60.815 63.158 0.00 0.00 0.00 4.73
6731 7069 3.204827 CAGGGTGGTGCTATGCGC 61.205 66.667 0.00 0.00 38.45 6.09
6755 7093 4.489771 GCCACCGGCTACCAGCAT 62.490 66.667 0.00 0.00 46.69 3.79
6756 7094 2.272146 CCACCGGCTACCAGCATT 59.728 61.111 0.00 0.00 44.75 3.56
6757 7095 2.114670 CCACCGGCTACCAGCATTG 61.115 63.158 0.00 0.00 44.75 2.82
6758 7096 2.438434 ACCGGCTACCAGCATTGC 60.438 61.111 0.00 0.00 44.75 3.56
6759 7097 2.438254 CCGGCTACCAGCATTGCA 60.438 61.111 11.91 0.00 44.75 4.08
6760 7098 2.045708 CCGGCTACCAGCATTGCAA 61.046 57.895 11.91 0.00 44.75 4.08
6761 7099 1.386525 CCGGCTACCAGCATTGCAAT 61.387 55.000 11.91 5.99 44.75 3.56
6762 7100 0.029834 CGGCTACCAGCATTGCAATC 59.970 55.000 9.53 4.91 44.75 2.67
6763 7101 0.029834 GGCTACCAGCATTGCAATCG 59.970 55.000 9.53 6.73 44.75 3.34
6764 7102 0.593263 GCTACCAGCATTGCAATCGC 60.593 55.000 19.73 19.73 41.89 4.58
6765 7103 3.204360 GCTACCAGCATTGCAATCGCA 62.204 52.381 25.39 11.46 43.83 5.10
6773 7111 3.142162 TGCAATCGCAGCCCCATG 61.142 61.111 0.00 0.00 45.36 3.66
6774 7112 3.142838 GCAATCGCAGCCCCATGT 61.143 61.111 0.00 0.00 38.36 3.21
6775 7113 2.802792 CAATCGCAGCCCCATGTG 59.197 61.111 0.00 0.00 0.00 3.21
6776 7114 3.142838 AATCGCAGCCCCATGTGC 61.143 61.111 0.00 0.00 36.27 4.57
6777 7115 3.650298 AATCGCAGCCCCATGTGCT 62.650 57.895 4.72 3.11 40.41 4.40
6778 7116 3.650298 ATCGCAGCCCCATGTGCTT 62.650 57.895 4.35 0.00 36.81 3.91
6779 7117 3.818787 CGCAGCCCCATGTGCTTC 61.819 66.667 4.35 0.00 36.81 3.86
6780 7118 2.677524 GCAGCCCCATGTGCTTCA 60.678 61.111 4.35 0.00 36.81 3.02
6781 7119 2.277591 GCAGCCCCATGTGCTTCAA 61.278 57.895 4.35 0.00 36.81 2.69
6782 7120 1.588082 CAGCCCCATGTGCTTCAAC 59.412 57.895 4.35 0.00 36.81 3.18
6783 7121 1.973281 AGCCCCATGTGCTTCAACG 60.973 57.895 1.35 0.00 34.87 4.10
6784 7122 2.993471 GCCCCATGTGCTTCAACGG 61.993 63.158 0.00 0.00 0.00 4.44
6785 7123 1.603455 CCCCATGTGCTTCAACGGT 60.603 57.895 0.00 0.00 0.00 4.83
6786 7124 0.322098 CCCCATGTGCTTCAACGGTA 60.322 55.000 0.00 0.00 0.00 4.02
6787 7125 1.086696 CCCATGTGCTTCAACGGTAG 58.913 55.000 0.00 0.00 0.00 3.18
6788 7126 1.610624 CCCATGTGCTTCAACGGTAGT 60.611 52.381 0.00 0.00 0.00 2.73
6789 7127 1.464608 CCATGTGCTTCAACGGTAGTG 59.535 52.381 0.00 0.00 0.00 2.74
6790 7128 1.135972 CATGTGCTTCAACGGTAGTGC 60.136 52.381 0.00 0.00 0.00 4.40
6791 7129 0.882927 TGTGCTTCAACGGTAGTGCC 60.883 55.000 0.00 0.00 0.00 5.01
6792 7130 1.302192 TGCTTCAACGGTAGTGCCC 60.302 57.895 0.00 0.00 0.00 5.36
6799 7137 2.812499 CGGTAGTGCCCGCATACT 59.188 61.111 0.00 0.00 41.78 2.12
6800 7138 1.591594 CGGTAGTGCCCGCATACTG 60.592 63.158 0.00 0.00 41.78 2.74
6801 7139 1.887707 GGTAGTGCCCGCATACTGC 60.888 63.158 0.00 0.00 40.69 4.40
6802 7140 1.887707 GTAGTGCCCGCATACTGCC 60.888 63.158 0.00 0.00 41.12 4.85
6803 7141 3.101796 TAGTGCCCGCATACTGCCC 62.102 63.158 0.00 0.00 41.12 5.36
6804 7142 4.489771 GTGCCCGCATACTGCCCT 62.490 66.667 0.00 0.00 41.12 5.19
6805 7143 4.175337 TGCCCGCATACTGCCCTC 62.175 66.667 0.00 0.00 41.12 4.30
6806 7144 4.175337 GCCCGCATACTGCCCTCA 62.175 66.667 0.00 0.00 41.12 3.86
6807 7145 2.831770 CCCGCATACTGCCCTCAT 59.168 61.111 0.00 0.00 41.12 2.90
6808 7146 1.598962 CCCGCATACTGCCCTCATG 60.599 63.158 0.00 0.00 41.12 3.07
6809 7147 1.598962 CCGCATACTGCCCTCATGG 60.599 63.158 0.00 0.00 41.12 3.66
6818 7156 4.530857 CCCTCATGGCGACCGACC 62.531 72.222 0.00 0.00 0.00 4.79
6819 7157 4.873129 CCTCATGGCGACCGACCG 62.873 72.222 0.00 0.00 0.00 4.79
6860 7198 4.195308 GCGGAAGGCGATGTTGTA 57.805 55.556 0.00 0.00 0.00 2.41
6861 7199 1.713830 GCGGAAGGCGATGTTGTAC 59.286 57.895 0.00 0.00 0.00 2.90
6862 7200 1.017177 GCGGAAGGCGATGTTGTACA 61.017 55.000 0.00 0.00 0.00 2.90
6863 7201 1.434555 CGGAAGGCGATGTTGTACAA 58.565 50.000 3.59 3.59 0.00 2.41
6864 7202 1.127951 CGGAAGGCGATGTTGTACAAC 59.872 52.381 28.13 28.13 41.50 3.32
6865 7203 1.467342 GGAAGGCGATGTTGTACAACC 59.533 52.381 30.68 17.98 40.46 3.77
6866 7204 1.127951 GAAGGCGATGTTGTACAACCG 59.872 52.381 30.68 27.19 40.46 4.44
6867 7205 0.672401 AGGCGATGTTGTACAACCGG 60.672 55.000 30.68 21.36 40.46 5.28
6868 7206 1.133869 GCGATGTTGTACAACCGGC 59.866 57.895 30.68 25.77 40.46 6.13
6869 7207 1.418367 CGATGTTGTACAACCGGCG 59.582 57.895 30.68 25.73 40.46 6.46
6870 7208 1.009903 CGATGTTGTACAACCGGCGA 61.010 55.000 30.68 15.73 40.46 5.54
6871 7209 1.149987 GATGTTGTACAACCGGCGAA 58.850 50.000 30.68 15.05 40.46 4.70
6872 7210 1.127951 GATGTTGTACAACCGGCGAAG 59.872 52.381 30.68 0.00 40.46 3.79
6873 7211 1.205820 GTTGTACAACCGGCGAAGC 59.794 57.895 25.31 0.00 44.14 3.86
6874 7212 1.226030 GTTGTACAACCGGCGAAGCT 61.226 55.000 25.31 0.00 44.25 3.74
6875 7213 1.936203 GTTGTACAACCGGCGAAGCTA 60.936 52.381 25.31 0.00 44.25 3.32
6876 7214 3.800766 GTTGTACAACCGGCGAAGCTAG 61.801 54.545 25.31 0.00 44.25 3.42
6877 7215 5.999603 GTTGTACAACCGGCGAAGCTAGA 63.000 52.174 25.31 0.00 44.25 2.43
6894 7232 4.918037 GCTAGAGCTGGAATCAACAAATG 58.082 43.478 0.00 0.00 38.21 2.32
6895 7233 3.863142 AGAGCTGGAATCAACAAATGC 57.137 42.857 0.00 0.00 0.00 3.56
6896 7234 3.428532 AGAGCTGGAATCAACAAATGCT 58.571 40.909 0.00 0.00 0.00 3.79
6897 7235 4.592942 AGAGCTGGAATCAACAAATGCTA 58.407 39.130 0.00 0.00 0.00 3.49
6898 7236 4.397417 AGAGCTGGAATCAACAAATGCTAC 59.603 41.667 0.00 0.00 0.00 3.58
6899 7237 4.081406 AGCTGGAATCAACAAATGCTACA 58.919 39.130 0.00 0.00 0.00 2.74
6900 7238 4.708421 AGCTGGAATCAACAAATGCTACAT 59.292 37.500 0.00 0.00 0.00 2.29
6901 7239 4.802039 GCTGGAATCAACAAATGCTACATG 59.198 41.667 0.00 0.00 0.00 3.21
6902 7240 4.746729 TGGAATCAACAAATGCTACATGC 58.253 39.130 0.00 0.00 43.25 4.06
6903 7241 4.114794 GGAATCAACAAATGCTACATGCC 58.885 43.478 0.00 0.00 42.00 4.40
6904 7242 3.806625 ATCAACAAATGCTACATGCCC 57.193 42.857 0.00 0.00 42.00 5.36
6905 7243 2.523245 TCAACAAATGCTACATGCCCA 58.477 42.857 0.00 0.00 42.00 5.36
6906 7244 2.230992 TCAACAAATGCTACATGCCCAC 59.769 45.455 0.00 0.00 42.00 4.61
6907 7245 1.185315 ACAAATGCTACATGCCCACC 58.815 50.000 0.00 0.00 42.00 4.61
6908 7246 1.184431 CAAATGCTACATGCCCACCA 58.816 50.000 0.00 0.00 42.00 4.17
6909 7247 1.135024 CAAATGCTACATGCCCACCAC 60.135 52.381 0.00 0.00 42.00 4.16
6910 7248 0.332632 AATGCTACATGCCCACCACT 59.667 50.000 0.00 0.00 42.00 4.00
6911 7249 0.394762 ATGCTACATGCCCACCACTG 60.395 55.000 0.00 0.00 42.00 3.66
6912 7250 2.409870 GCTACATGCCCACCACTGC 61.410 63.158 0.00 0.00 35.15 4.40
6913 7251 1.002257 CTACATGCCCACCACTGCA 60.002 57.895 0.00 0.00 42.52 4.41
6914 7252 1.002257 TACATGCCCACCACTGCAG 60.002 57.895 13.48 13.48 41.46 4.41
6915 7253 2.482796 TACATGCCCACCACTGCAGG 62.483 60.000 19.93 4.24 44.27 4.85
6918 7256 4.033776 GCCCACCACTGCAGGCTA 62.034 66.667 19.93 0.00 42.34 3.93
6919 7257 2.270205 CCCACCACTGCAGGCTAG 59.730 66.667 19.93 5.84 0.00 3.42
6920 7258 2.293318 CCCACCACTGCAGGCTAGA 61.293 63.158 19.93 0.00 0.00 2.43
6921 7259 1.220206 CCACCACTGCAGGCTAGAG 59.780 63.158 19.93 2.46 0.00 2.43
6922 7260 1.449246 CACCACTGCAGGCTAGAGC 60.449 63.158 19.93 0.00 41.14 4.09
6923 7261 1.611851 ACCACTGCAGGCTAGAGCT 60.612 57.895 19.93 0.00 41.70 4.09
6924 7262 0.324738 ACCACTGCAGGCTAGAGCTA 60.325 55.000 19.93 0.00 41.70 3.32
6925 7263 0.388659 CCACTGCAGGCTAGAGCTAG 59.611 60.000 19.93 0.13 41.70 3.42
6950 7288 2.639286 CAGTGCTGCAAACCGTCC 59.361 61.111 2.77 0.00 0.00 4.79
6951 7289 2.972505 AGTGCTGCAAACCGTCCG 60.973 61.111 2.77 0.00 0.00 4.79
6952 7290 4.683334 GTGCTGCAAACCGTCCGC 62.683 66.667 2.77 0.00 0.00 5.54
6958 7296 4.676586 CAAACCGTCCGCGCAACC 62.677 66.667 8.75 0.00 36.67 3.77
6959 7297 4.922026 AAACCGTCCGCGCAACCT 62.922 61.111 8.75 0.00 36.67 3.50
6962 7300 4.728102 CCGTCCGCGCAACCTGTA 62.728 66.667 8.75 0.00 36.67 2.74
6963 7301 2.508439 CGTCCGCGCAACCTGTAT 60.508 61.111 8.75 0.00 0.00 2.29
6964 7302 2.098233 CGTCCGCGCAACCTGTATT 61.098 57.895 8.75 0.00 0.00 1.89
6965 7303 1.632046 CGTCCGCGCAACCTGTATTT 61.632 55.000 8.75 0.00 0.00 1.40
6966 7304 0.519961 GTCCGCGCAACCTGTATTTT 59.480 50.000 8.75 0.00 0.00 1.82
6967 7305 1.068816 GTCCGCGCAACCTGTATTTTT 60.069 47.619 8.75 0.00 0.00 1.94
6983 7321 4.605064 TTTTTGCTGGAGCTGGCT 57.395 50.000 0.00 0.00 42.66 4.75
6984 7322 2.824961 TTTTTGCTGGAGCTGGCTT 58.175 47.368 0.00 0.00 42.66 4.35
6985 7323 0.675633 TTTTTGCTGGAGCTGGCTTC 59.324 50.000 0.00 0.00 42.66 3.86
6986 7324 1.181098 TTTTGCTGGAGCTGGCTTCC 61.181 55.000 0.00 1.97 42.66 3.46
6987 7325 2.356173 TTTGCTGGAGCTGGCTTCCA 62.356 55.000 0.00 11.23 42.66 3.53
6988 7326 2.749441 GCTGGAGCTGGCTTCCAC 60.749 66.667 0.00 4.82 38.21 4.02
6989 7327 2.045536 CTGGAGCTGGCTTCCACC 60.046 66.667 0.00 1.65 0.00 4.61
6990 7328 3.965539 CTGGAGCTGGCTTCCACCG 62.966 68.421 0.00 0.50 0.00 4.94
6991 7329 3.706373 GGAGCTGGCTTCCACCGA 61.706 66.667 0.00 0.00 0.00 4.69
6992 7330 2.347490 GAGCTGGCTTCCACCGAA 59.653 61.111 0.00 0.00 0.00 4.30
6999 7337 4.063529 CTTCCACCGAAGCTGCAA 57.936 55.556 1.02 0.00 39.21 4.08
7000 7338 1.576421 CTTCCACCGAAGCTGCAAC 59.424 57.895 1.02 0.00 39.21 4.17
7001 7339 1.856265 CTTCCACCGAAGCTGCAACC 61.856 60.000 1.02 0.00 39.21 3.77
7002 7340 3.726517 CCACCGAAGCTGCAACCG 61.727 66.667 1.02 1.77 0.00 4.44
7003 7341 3.726517 CACCGAAGCTGCAACCGG 61.727 66.667 20.22 20.22 46.65 5.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
504 506 3.715834 AGGATCAGAGGATGGAAGGAAAG 59.284 47.826 0.00 0.00 32.67 2.62
691 693 9.457436 GTGATTATCCCCTTCTGTTACTAAAAA 57.543 33.333 0.00 0.00 0.00 1.94
692 694 8.050930 GGTGATTATCCCCTTCTGTTACTAAAA 58.949 37.037 0.00 0.00 0.00 1.52
693 695 7.404980 AGGTGATTATCCCCTTCTGTTACTAAA 59.595 37.037 0.00 0.00 0.00 1.85
694 696 6.906901 AGGTGATTATCCCCTTCTGTTACTAA 59.093 38.462 0.00 0.00 0.00 2.24
695 697 6.449956 AGGTGATTATCCCCTTCTGTTACTA 58.550 40.000 0.00 0.00 0.00 1.82
696 698 5.289510 AGGTGATTATCCCCTTCTGTTACT 58.710 41.667 0.00 0.00 0.00 2.24
697 699 5.632034 AGGTGATTATCCCCTTCTGTTAC 57.368 43.478 0.00 0.00 0.00 2.50
698 700 6.652205 AAAGGTGATTATCCCCTTCTGTTA 57.348 37.500 9.31 0.00 37.60 2.41
699 701 5.536497 AAAGGTGATTATCCCCTTCTGTT 57.464 39.130 9.31 0.00 37.60 3.16
700 702 5.536497 AAAAGGTGATTATCCCCTTCTGT 57.464 39.130 9.31 0.00 37.60 3.41
722 724 9.695155 CCAAACTATCCCCTTCTAATTCTAAAA 57.305 33.333 0.00 0.00 0.00 1.52
723 725 8.842764 ACCAAACTATCCCCTTCTAATTCTAAA 58.157 33.333 0.00 0.00 0.00 1.85
724 726 8.272173 CACCAAACTATCCCCTTCTAATTCTAA 58.728 37.037 0.00 0.00 0.00 2.10
725 727 7.147373 CCACCAAACTATCCCCTTCTAATTCTA 60.147 40.741 0.00 0.00 0.00 2.10
726 728 6.353951 CCACCAAACTATCCCCTTCTAATTCT 60.354 42.308 0.00 0.00 0.00 2.40
727 729 5.828328 CCACCAAACTATCCCCTTCTAATTC 59.172 44.000 0.00 0.00 0.00 2.17
728 730 5.766590 CCACCAAACTATCCCCTTCTAATT 58.233 41.667 0.00 0.00 0.00 1.40
729 731 4.386424 GCCACCAAACTATCCCCTTCTAAT 60.386 45.833 0.00 0.00 0.00 1.73
730 732 3.053917 GCCACCAAACTATCCCCTTCTAA 60.054 47.826 0.00 0.00 0.00 2.10
731 733 2.508300 GCCACCAAACTATCCCCTTCTA 59.492 50.000 0.00 0.00 0.00 2.10
732 734 1.285078 GCCACCAAACTATCCCCTTCT 59.715 52.381 0.00 0.00 0.00 2.85
733 735 1.005450 TGCCACCAAACTATCCCCTTC 59.995 52.381 0.00 0.00 0.00 3.46
734 736 1.080638 TGCCACCAAACTATCCCCTT 58.919 50.000 0.00 0.00 0.00 3.95
735 737 1.080638 TTGCCACCAAACTATCCCCT 58.919 50.000 0.00 0.00 0.00 4.79
736 738 1.931635 TTTGCCACCAAACTATCCCC 58.068 50.000 0.00 0.00 36.09 4.81
737 739 3.161866 TCTTTTGCCACCAAACTATCCC 58.838 45.455 0.00 0.00 40.45 3.85
738 740 3.193479 CCTCTTTTGCCACCAAACTATCC 59.807 47.826 0.00 0.00 40.45 2.59
739 741 4.079253 TCCTCTTTTGCCACCAAACTATC 58.921 43.478 0.00 0.00 40.45 2.08
740 742 4.112634 TCCTCTTTTGCCACCAAACTAT 57.887 40.909 0.00 0.00 40.45 2.12
741 743 3.586470 TCCTCTTTTGCCACCAAACTA 57.414 42.857 0.00 0.00 40.45 2.24
742 744 2.452600 TCCTCTTTTGCCACCAAACT 57.547 45.000 0.00 0.00 40.45 2.66
743 745 3.132111 TCTTTCCTCTTTTGCCACCAAAC 59.868 43.478 0.00 0.00 40.45 2.93
744 746 3.370104 TCTTTCCTCTTTTGCCACCAAA 58.630 40.909 0.00 0.00 39.08 3.28
745 747 3.025322 TCTTTCCTCTTTTGCCACCAA 57.975 42.857 0.00 0.00 0.00 3.67
746 748 2.746279 TCTTTCCTCTTTTGCCACCA 57.254 45.000 0.00 0.00 0.00 4.17
747 749 3.636764 TCTTTCTTTCCTCTTTTGCCACC 59.363 43.478 0.00 0.00 0.00 4.61
748 750 4.918810 TCTTTCTTTCCTCTTTTGCCAC 57.081 40.909 0.00 0.00 0.00 5.01
749 751 4.281688 CCATCTTTCTTTCCTCTTTTGCCA 59.718 41.667 0.00 0.00 0.00 4.92
759 761 0.820226 GCAGGCCCATCTTTCTTTCC 59.180 55.000 0.00 0.00 0.00 3.13
768 770 0.395586 TATGGTGTTGCAGGCCCATC 60.396 55.000 14.22 0.00 38.58 3.51
789 791 3.950254 CGACGACTATCGCCGCCT 61.950 66.667 0.00 0.00 45.12 5.52
797 799 0.317603 GCCGCATGTACGACGACTAT 60.318 55.000 0.00 0.00 34.06 2.12
798 800 1.063006 GCCGCATGTACGACGACTA 59.937 57.895 0.00 0.00 34.06 2.59
799 801 2.202570 GCCGCATGTACGACGACT 60.203 61.111 0.00 0.00 34.06 4.18
811 813 1.004560 CTTTGAGAGAGTGGCCGCA 60.005 57.895 20.59 0.00 0.00 5.69
848 850 1.694150 CTGGAAAGAGTCTGTGGGTCA 59.306 52.381 0.00 0.00 0.00 4.02
880 882 2.156098 GGGGCTGGCTGGATGGATA 61.156 63.158 0.00 0.00 0.00 2.59
1007 1009 3.197790 CGGGAATGTGGAGCAGCG 61.198 66.667 0.00 0.00 0.00 5.18
1008 1010 2.109126 GTCGGGAATGTGGAGCAGC 61.109 63.158 0.00 0.00 0.00 5.25
1009 1011 1.450312 GGTCGGGAATGTGGAGCAG 60.450 63.158 0.00 0.00 0.00 4.24
1010 1012 2.668632 GGTCGGGAATGTGGAGCA 59.331 61.111 0.00 0.00 0.00 4.26
1039 1041 1.646367 GGGAGGCTTTAGGGGAAGGG 61.646 65.000 0.00 0.00 0.00 3.95
1040 1042 0.624795 AGGGAGGCTTTAGGGGAAGG 60.625 60.000 0.00 0.00 0.00 3.46
1041 1043 0.840617 GAGGGAGGCTTTAGGGGAAG 59.159 60.000 0.00 0.00 0.00 3.46
1042 1044 0.623617 GGAGGGAGGCTTTAGGGGAA 60.624 60.000 0.00 0.00 0.00 3.97
1043 1045 1.004361 GGAGGGAGGCTTTAGGGGA 59.996 63.158 0.00 0.00 0.00 4.81
1180 1182 4.060038 GGAAAGTCGTCGCGGGGA 62.060 66.667 6.13 0.05 0.00 4.81
1205 1217 2.818132 CTGGATCAGAGGACGGGC 59.182 66.667 0.00 0.00 32.44 6.13
1210 1222 3.531207 CGCGGCTGGATCAGAGGA 61.531 66.667 0.00 0.00 32.44 3.71
1234 1246 3.528370 CGTCCCGGCGAGATTCCT 61.528 66.667 9.30 0.00 0.00 3.36
1385 1397 1.344226 GCGAAAACGCAAATCTGGGC 61.344 55.000 9.66 0.00 39.06 5.36
1462 1474 1.651987 GTTGCCTACAGCTAATCGCA 58.348 50.000 0.00 0.00 44.23 5.10
1479 1491 2.203437 GAGGGCCCAAACCACGTT 60.203 61.111 27.56 0.00 0.00 3.99
1666 1680 3.060000 AGTGATCCCGTCGCGTCA 61.060 61.111 5.77 0.00 42.24 4.35
1760 1774 6.624861 GCTGCTCCTACAGATGATAGATACAC 60.625 46.154 0.00 0.00 40.25 2.90
1779 1793 2.246719 AACTATGATTCCGGCTGCTC 57.753 50.000 0.00 0.00 0.00 4.26
1786 1800 8.715998 CAGAATATCCAGAAAACTATGATTCCG 58.284 37.037 0.00 0.00 0.00 4.30
1847 1861 4.821805 GCAATGGCTATAGTTCCTGCTTTA 59.178 41.667 0.84 0.00 36.96 1.85
1869 1884 4.111198 CACTGTCAGTCTATCACAGATGC 58.889 47.826 1.37 0.00 40.07 3.91
1967 2037 8.137437 CCACAAATGAAATGGCTATAGGTTAAG 58.863 37.037 1.04 0.00 0.00 1.85
1972 2042 6.998074 TCTACCACAAATGAAATGGCTATAGG 59.002 38.462 1.04 0.00 36.96 2.57
2018 2119 9.878599 CGATGATAACCCTTTTACAATGATTAC 57.121 33.333 0.00 0.00 0.00 1.89
2020 2121 7.014230 CCCGATGATAACCCTTTTACAATGATT 59.986 37.037 0.00 0.00 0.00 2.57
2026 2127 3.054287 TGCCCGATGATAACCCTTTTACA 60.054 43.478 0.00 0.00 0.00 2.41
2310 2411 6.232692 AGCACAACCAAATAAAATGCTCAAT 58.767 32.000 0.00 0.00 37.36 2.57
2312 2413 5.212532 AGCACAACCAAATAAAATGCTCA 57.787 34.783 0.00 0.00 37.36 4.26
2322 2423 1.963515 GTTCCTGGAGCACAACCAAAT 59.036 47.619 5.59 0.00 36.95 2.32
2330 2431 2.766828 ACTATACAGGTTCCTGGAGCAC 59.233 50.000 20.88 1.31 38.30 4.40
2332 2433 2.766828 ACACTATACAGGTTCCTGGAGC 59.233 50.000 20.88 1.35 38.30 4.70
2367 2468 3.913799 TGTCCAACTATTTTCCTCCCAGA 59.086 43.478 0.00 0.00 0.00 3.86
2370 2471 5.261216 TCATTGTCCAACTATTTTCCTCCC 58.739 41.667 0.00 0.00 0.00 4.30
2371 2472 7.410120 AATCATTGTCCAACTATTTTCCTCC 57.590 36.000 0.00 0.00 0.00 4.30
2378 2479 6.540189 CGAGAAGGAATCATTGTCCAACTATT 59.460 38.462 0.00 0.00 37.65 1.73
2384 2485 3.981071 ACGAGAAGGAATCATTGTCCA 57.019 42.857 0.00 0.00 37.65 4.02
2395 2496 6.839454 ACTGATAGAAGGTATACGAGAAGGA 58.161 40.000 0.00 0.00 0.00 3.36
2403 2504 9.182933 CGCTAAAGAAACTGATAGAAGGTATAC 57.817 37.037 0.00 0.00 0.00 1.47
2485 2746 6.541278 TCAAGAAAGGATAGCATGACAATCTG 59.459 38.462 0.00 0.00 0.00 2.90
2510 2771 9.260002 GTTGAATTTGAGTGGACAACAATATTT 57.740 29.630 0.00 0.00 37.90 1.40
2551 2812 2.766736 TCCCCATTACCGTACCAAGAT 58.233 47.619 0.00 0.00 0.00 2.40
2556 2817 3.564053 TTGATTCCCCATTACCGTACC 57.436 47.619 0.00 0.00 0.00 3.34
2560 2821 4.460263 TGAAGATTGATTCCCCATTACCG 58.540 43.478 0.00 0.00 0.00 4.02
2564 2825 9.833179 ATACATAATGAAGATTGATTCCCCATT 57.167 29.630 0.00 0.00 33.83 3.16
2591 2852 5.316167 AGCCAAAACTACATGAGTGAATGA 58.684 37.500 0.00 0.00 38.87 2.57
2592 2853 5.392380 GGAGCCAAAACTACATGAGTGAATG 60.392 44.000 0.00 0.07 38.87 2.67
2593 2854 4.702131 GGAGCCAAAACTACATGAGTGAAT 59.298 41.667 0.00 0.00 38.87 2.57
2744 3005 8.451245 AGTAAGGGATGGATCAACAATAATCAT 58.549 33.333 0.00 0.00 0.00 2.45
2783 3044 5.169992 TGGGATGTCCTTCTGCATATATG 57.830 43.478 8.45 8.45 36.20 1.78
2925 3187 1.823470 GTGACTGCACTGGCCAACA 60.823 57.895 7.01 4.58 41.84 3.33
3075 3337 3.117512 ACTCACCAGACTTTTGGGTCAAT 60.118 43.478 0.00 0.00 42.76 2.57
3120 3382 4.202223 ACTCTCCGCTAAACAAGAAAGACA 60.202 41.667 0.00 0.00 0.00 3.41
3136 3398 0.742281 CCAACCATCAGCACTCTCCG 60.742 60.000 0.00 0.00 0.00 4.63
3160 3422 3.059597 CACCTCACGATCTTTGACACAAC 60.060 47.826 0.00 0.00 0.00 3.32
3196 3459 1.295423 GTTGGCGCCCTACTCTTCA 59.705 57.895 26.77 0.00 0.00 3.02
3209 3472 4.043200 GCGGGCTGACTTGTTGGC 62.043 66.667 0.00 0.00 0.00 4.52
3322 3585 4.591498 TGTCAACAGCCCTTTCTCTACTTA 59.409 41.667 0.00 0.00 0.00 2.24
3329 3592 2.158475 TCCATTGTCAACAGCCCTTTCT 60.158 45.455 0.00 0.00 0.00 2.52
3416 3679 0.984230 TCTGACCCTTGCTCGGAAAT 59.016 50.000 0.00 0.00 0.00 2.17
3422 3685 2.698855 TTGCTATCTGACCCTTGCTC 57.301 50.000 0.00 0.00 0.00 4.26
3529 3792 1.490490 TCTGACTTTGTGAGGGCTGTT 59.510 47.619 0.00 0.00 0.00 3.16
3591 3854 1.372683 GTGGTCTCTGGCTCTGCAA 59.627 57.895 0.00 0.00 0.00 4.08
3592 3855 1.410050 TTGTGGTCTCTGGCTCTGCA 61.410 55.000 0.00 0.00 0.00 4.41
3593 3856 0.952984 GTTGTGGTCTCTGGCTCTGC 60.953 60.000 0.00 0.00 0.00 4.26
3594 3857 0.394192 TGTTGTGGTCTCTGGCTCTG 59.606 55.000 0.00 0.00 0.00 3.35
3595 3858 0.683973 CTGTTGTGGTCTCTGGCTCT 59.316 55.000 0.00 0.00 0.00 4.09
3596 3859 0.394565 ACTGTTGTGGTCTCTGGCTC 59.605 55.000 0.00 0.00 0.00 4.70
3597 3860 0.394565 GACTGTTGTGGTCTCTGGCT 59.605 55.000 0.00 0.00 0.00 4.75
3598 3861 0.106708 TGACTGTTGTGGTCTCTGGC 59.893 55.000 0.00 0.00 35.04 4.85
3599 3862 2.693069 GATGACTGTTGTGGTCTCTGG 58.307 52.381 0.00 0.00 35.04 3.86
3600 3863 2.332104 CGATGACTGTTGTGGTCTCTG 58.668 52.381 0.00 0.00 35.04 3.35
3601 3864 1.337260 GCGATGACTGTTGTGGTCTCT 60.337 52.381 0.00 0.00 35.04 3.10
3602 3865 1.071605 GCGATGACTGTTGTGGTCTC 58.928 55.000 0.00 0.00 35.04 3.36
3603 3866 0.392706 TGCGATGACTGTTGTGGTCT 59.607 50.000 0.00 0.00 35.04 3.85
3604 3867 0.792640 CTGCGATGACTGTTGTGGTC 59.207 55.000 0.00 0.00 0.00 4.02
3605 3868 0.392706 TCTGCGATGACTGTTGTGGT 59.607 50.000 0.00 0.00 0.00 4.16
3606 3869 1.073964 CTCTGCGATGACTGTTGTGG 58.926 55.000 0.00 0.00 0.00 4.17
3607 3870 0.441533 GCTCTGCGATGACTGTTGTG 59.558 55.000 0.00 0.00 0.00 3.33
3608 3871 0.671781 GGCTCTGCGATGACTGTTGT 60.672 55.000 0.00 0.00 0.00 3.32
3609 3872 0.671472 TGGCTCTGCGATGACTGTTG 60.671 55.000 0.00 0.00 0.00 3.33
3610 3873 0.390866 CTGGCTCTGCGATGACTGTT 60.391 55.000 0.00 0.00 0.00 3.16
3611 3874 1.217511 CTGGCTCTGCGATGACTGT 59.782 57.895 0.00 0.00 0.00 3.55
3612 3875 0.528033 CTCTGGCTCTGCGATGACTG 60.528 60.000 0.00 0.00 0.00 3.51
3613 3876 1.674764 CCTCTGGCTCTGCGATGACT 61.675 60.000 0.00 0.00 0.00 3.41
3614 3877 1.227205 CCTCTGGCTCTGCGATGAC 60.227 63.158 0.00 0.00 0.00 3.06
3615 3878 3.086391 GCCTCTGGCTCTGCGATGA 62.086 63.158 0.73 0.00 46.69 2.92
3632 3895 2.943345 CTGCGACGACTGTTGTGGC 61.943 63.158 23.38 23.38 40.87 5.01
3718 3981 4.724602 GGCTCTGCGACGACTGCA 62.725 66.667 0.00 0.00 40.70 4.41
3811 4074 1.196766 TGACTGCAGTGGCCTCTCAT 61.197 55.000 27.27 0.00 40.13 2.90
4264 4530 3.379240 CAGATACTTGTCGAGATGGCTG 58.621 50.000 0.50 1.79 0.00 4.85
4404 4670 2.012051 GCCCAGAAACAGTACGGGATG 61.012 57.143 4.11 0.00 39.44 3.51
4412 4678 6.006275 ACTGATAATATGCCCAGAAACAGT 57.994 37.500 0.00 0.00 0.00 3.55
4415 4681 7.885399 AGGATAACTGATAATATGCCCAGAAAC 59.115 37.037 0.00 0.00 0.00 2.78
4454 4723 9.292195 TCTATACACAGACGGAACATATTATCA 57.708 33.333 0.00 0.00 0.00 2.15
4493 4764 2.280628 GCTCAGAAGATACAAACCCGG 58.719 52.381 0.00 0.00 0.00 5.73
4565 4837 3.945981 TTGCAATCGGTGTAGTCAGTA 57.054 42.857 0.00 0.00 0.00 2.74
4700 4972 7.818493 AGAGTTTTCTTCTTTTCAAAGCAAC 57.182 32.000 0.00 0.00 35.99 4.17
5049 5323 9.500864 GAGTATAGACTAAAAGTAACCAACGAG 57.499 37.037 0.00 0.00 35.45 4.18
5096 5370 1.906574 ACAAGTAATCAGGGCGGAAGA 59.093 47.619 0.00 0.00 0.00 2.87
5098 5372 1.404986 CGACAAGTAATCAGGGCGGAA 60.405 52.381 0.00 0.00 0.00 4.30
5163 5437 2.967362 TGTCGCAGAAATGGACGTATT 58.033 42.857 0.00 0.00 39.69 1.89
5168 5442 4.946784 ATTACTTGTCGCAGAAATGGAC 57.053 40.909 0.00 0.00 39.69 4.02
5226 5500 2.524569 TCTCATTCAAGTGTGTCGCA 57.475 45.000 0.00 0.00 0.00 5.10
5227 5501 3.425359 CCAATCTCATTCAAGTGTGTCGC 60.425 47.826 0.00 0.00 0.00 5.19
5241 5515 6.368791 CGAGTTCTAAACAACATCCAATCTCA 59.631 38.462 0.00 0.00 0.00 3.27
5246 5520 5.237779 GGAACGAGTTCTAAACAACATCCAA 59.762 40.000 14.62 0.00 39.45 3.53
5362 5636 3.567797 GCAATCCTCGCGCTGACC 61.568 66.667 5.56 0.00 0.00 4.02
5413 5687 0.891373 CACGCCTCTCTTCTTCCTCA 59.109 55.000 0.00 0.00 0.00 3.86
5536 5810 3.443045 GCACCCACATTCCAGCCG 61.443 66.667 0.00 0.00 0.00 5.52
5544 5818 1.601759 GCACAGACAGCACCCACAT 60.602 57.895 0.00 0.00 0.00 3.21
5593 5867 4.404098 ACGGCGCTTAACTGGGGG 62.404 66.667 6.90 0.00 0.00 5.40
5698 5974 3.380479 TCAGAAGAAGTACAACCCACG 57.620 47.619 0.00 0.00 0.00 4.94
5716 5992 4.880164 ACTAACTACCCCTATCAGCTTCA 58.120 43.478 0.00 0.00 0.00 3.02
5755 6031 1.352156 CTTTGACCTCGGCGCACTAC 61.352 60.000 10.83 0.00 0.00 2.73
5762 6038 0.250338 AGAACACCTTTGACCTCGGC 60.250 55.000 0.00 0.00 0.00 5.54
5852 6129 5.409214 TGTTTATGACCAGCTAACGGTAAAC 59.591 40.000 9.86 9.86 36.69 2.01
5855 6132 4.804868 TGTTTATGACCAGCTAACGGTA 57.195 40.909 0.00 0.00 36.69 4.02
5856 6133 3.688694 TGTTTATGACCAGCTAACGGT 57.311 42.857 0.00 0.00 40.30 4.83
6025 6304 2.159085 GCTAGTACGGCCAATCAAGTCT 60.159 50.000 2.24 0.00 0.00 3.24
6056 6335 3.522759 TCCTACTAACCATCCAACCACA 58.477 45.455 0.00 0.00 0.00 4.17
6078 6357 5.987019 AAATAAAGGCCAGGATACCACTA 57.013 39.130 5.01 0.00 37.17 2.74
6080 6359 6.831868 TCTTAAAATAAAGGCCAGGATACCAC 59.168 38.462 5.01 0.00 37.17 4.16
6089 6368 7.024768 CGTCGAAAATCTTAAAATAAAGGCCA 58.975 34.615 5.01 0.00 0.00 5.36
6093 6372 8.453743 CGCATCGTCGAAAATCTTAAAATAAAG 58.546 33.333 0.00 0.00 0.00 1.85
6094 6373 7.958567 ACGCATCGTCGAAAATCTTAAAATAAA 59.041 29.630 0.00 0.00 33.69 1.40
6112 6391 2.747989 TCTCTTAGTGAAGACGCATCGT 59.252 45.455 0.00 0.00 45.10 3.73
6113 6392 3.406728 TCTCTTAGTGAAGACGCATCG 57.593 47.619 0.00 0.00 36.75 3.84
6140 6419 0.534203 GCACCTCAAAGTCAACGGGA 60.534 55.000 0.00 0.00 0.00 5.14
6143 6422 1.581934 TGAGCACCTCAAAGTCAACG 58.418 50.000 0.00 0.00 37.57 4.10
6146 6425 1.618343 TCGATGAGCACCTCAAAGTCA 59.382 47.619 0.00 0.00 44.04 3.41
6164 6443 4.988540 TCTCCCAATAATAAAGACGCATCG 59.011 41.667 0.00 0.00 0.00 3.84
6165 6444 6.861065 TTCTCCCAATAATAAAGACGCATC 57.139 37.500 0.00 0.00 0.00 3.91
6168 6447 6.483640 ACTCATTCTCCCAATAATAAAGACGC 59.516 38.462 0.00 0.00 0.00 5.19
6169 6448 7.495934 ACACTCATTCTCCCAATAATAAAGACG 59.504 37.037 0.00 0.00 0.00 4.18
6189 6468 9.087424 GCGCTCAAATATATGATTATACACTCA 57.913 33.333 0.00 0.00 0.00 3.41
6190 6469 8.543774 GGCGCTCAAATATATGATTATACACTC 58.456 37.037 7.64 0.00 0.00 3.51
6200 6537 2.068519 CGCAGGCGCTCAAATATATGA 58.931 47.619 7.64 0.00 35.30 2.15
6201 6538 1.800586 ACGCAGGCGCTCAAATATATG 59.199 47.619 14.32 0.00 44.19 1.78
6208 6545 2.126071 GTAGACGCAGGCGCTCAA 60.126 61.111 14.32 0.00 44.19 3.02
6215 6552 2.159421 ACAATACAGACGTAGACGCAGG 60.159 50.000 1.14 0.00 44.43 4.85
6254 6591 5.212934 GTCTCACATTTGCATGCTGATATG 58.787 41.667 20.33 17.25 33.05 1.78
6255 6592 4.024302 CGTCTCACATTTGCATGCTGATAT 60.024 41.667 20.33 4.02 33.05 1.63
6258 6595 1.465777 CGTCTCACATTTGCATGCTGA 59.534 47.619 20.33 12.59 33.05 4.26
6260 6597 1.812235 TCGTCTCACATTTGCATGCT 58.188 45.000 20.33 0.00 33.05 3.79
6307 6644 5.979993 TGCATGCTGATATGGTCAATTTTT 58.020 33.333 20.33 0.00 36.14 1.94
6308 6645 5.601583 TGCATGCTGATATGGTCAATTTT 57.398 34.783 20.33 0.00 36.14 1.82
6309 6646 5.601583 TTGCATGCTGATATGGTCAATTT 57.398 34.783 20.33 0.00 36.14 1.82
6310 6647 5.601583 TTTGCATGCTGATATGGTCAATT 57.398 34.783 20.33 0.00 36.14 2.32
6311 6648 5.069914 ACATTTGCATGCTGATATGGTCAAT 59.930 36.000 20.33 0.00 33.26 2.57
6312 6649 4.403113 ACATTTGCATGCTGATATGGTCAA 59.597 37.500 20.33 0.00 33.26 3.18
6313 6650 3.955551 ACATTTGCATGCTGATATGGTCA 59.044 39.130 20.33 0.00 33.05 4.02
6314 6651 4.037089 TCACATTTGCATGCTGATATGGTC 59.963 41.667 20.33 0.00 33.05 4.02
6315 6652 3.955551 TCACATTTGCATGCTGATATGGT 59.044 39.130 20.33 5.24 33.05 3.55
6316 6653 4.277423 TCTCACATTTGCATGCTGATATGG 59.723 41.667 20.33 10.33 33.05 2.74
6317 6654 5.212934 GTCTCACATTTGCATGCTGATATG 58.787 41.667 20.33 17.25 33.05 1.78
6318 6655 4.024302 CGTCTCACATTTGCATGCTGATAT 60.024 41.667 20.33 4.02 33.05 1.63
6319 6656 3.310501 CGTCTCACATTTGCATGCTGATA 59.689 43.478 20.33 3.59 33.05 2.15
6320 6657 2.096980 CGTCTCACATTTGCATGCTGAT 59.903 45.455 20.33 9.82 33.05 2.90
6321 6658 1.465777 CGTCTCACATTTGCATGCTGA 59.534 47.619 20.33 12.59 33.05 4.26
6322 6659 1.465777 TCGTCTCACATTTGCATGCTG 59.534 47.619 20.33 11.63 33.05 4.41
6323 6660 1.812235 TCGTCTCACATTTGCATGCT 58.188 45.000 20.33 0.00 33.05 3.79
6324 6661 2.838386 ATCGTCTCACATTTGCATGC 57.162 45.000 11.82 11.82 33.05 4.06
6325 6662 7.633621 ACTATTTATCGTCTCACATTTGCATG 58.366 34.615 0.00 0.00 36.34 4.06
6326 6663 7.712639 AGACTATTTATCGTCTCACATTTGCAT 59.287 33.333 0.00 0.00 35.72 3.96
6327 6664 7.041721 AGACTATTTATCGTCTCACATTTGCA 58.958 34.615 0.00 0.00 35.72 4.08
6328 6665 7.470289 AGACTATTTATCGTCTCACATTTGC 57.530 36.000 0.00 0.00 35.72 3.68
6389 6727 2.956964 GCTTCAGCCGGTCGATCG 60.957 66.667 12.09 12.09 34.31 3.69
6418 6756 1.339151 GGTTTCGATTGAGAGGCCAGT 60.339 52.381 5.01 0.00 0.00 4.00
6420 6758 0.984230 AGGTTTCGATTGAGAGGCCA 59.016 50.000 5.01 0.00 0.00 5.36
6422 6760 2.386661 TCAGGTTTCGATTGAGAGGC 57.613 50.000 0.00 0.00 0.00 4.70
6429 6767 4.137543 GGCTATTGGATCAGGTTTCGATT 58.862 43.478 0.00 0.00 0.00 3.34
6479 6817 6.790232 AGATAGGAGAAGGAAGAAAGACAG 57.210 41.667 0.00 0.00 0.00 3.51
6509 6847 2.170166 GATGACCATGGCAAACTGGAA 58.830 47.619 13.04 1.08 36.35 3.53
6511 6849 0.819582 GGATGACCATGGCAAACTGG 59.180 55.000 13.04 4.07 38.55 4.00
6525 6863 1.381327 GGGAGGACGGTGAGGATGA 60.381 63.158 0.00 0.00 0.00 2.92
6562 6900 1.528542 TCGGATCTAGGAGGGCACG 60.529 63.158 0.00 0.00 0.00 5.34
6571 6909 4.511617 ACATGTAGCATGTCGGATCTAG 57.488 45.455 8.75 0.00 0.00 2.43
6572 6910 4.099419 ACAACATGTAGCATGTCGGATCTA 59.901 41.667 14.11 0.00 0.00 1.98
6577 6915 3.309682 CCTAACAACATGTAGCATGTCGG 59.690 47.826 14.11 11.95 0.00 4.79
6580 6918 4.261801 GTCCCTAACAACATGTAGCATGT 58.738 43.478 8.75 8.75 0.00 3.21
6582 6920 3.055385 ACGTCCCTAACAACATGTAGCAT 60.055 43.478 0.00 0.00 0.00 3.79
6583 6921 2.300723 ACGTCCCTAACAACATGTAGCA 59.699 45.455 0.00 0.00 0.00 3.49
6587 6925 1.202710 TGCACGTCCCTAACAACATGT 60.203 47.619 0.00 0.00 0.00 3.21
6596 6934 4.063967 CGTGGCTGCACGTCCCTA 62.064 66.667 13.77 0.00 42.91 3.53
6608 6946 1.389106 GTGAAGTGTTCGTATCGTGGC 59.611 52.381 0.00 0.00 0.00 5.01
6611 6949 2.034939 TGGTGTGAAGTGTTCGTATCGT 59.965 45.455 0.00 0.00 0.00 3.73
6624 6962 2.221169 GAATCAGCACTGTGGTGTGAA 58.779 47.619 31.65 18.24 45.34 3.18
6625 6963 1.873486 CGAATCAGCACTGTGGTGTGA 60.873 52.381 31.65 18.87 45.34 3.58
6629 6967 1.512926 GTTCGAATCAGCACTGTGGT 58.487 50.000 6.68 6.68 0.00 4.16
6681 7019 2.125269 ATCTGTACCGCAACCGCC 60.125 61.111 0.00 0.00 33.11 6.13
6682 7020 1.740296 ACATCTGTACCGCAACCGC 60.740 57.895 0.00 0.00 0.00 5.68
6683 7021 1.358725 CCACATCTGTACCGCAACCG 61.359 60.000 0.00 0.00 0.00 4.44
6684 7022 0.321298 ACCACATCTGTACCGCAACC 60.321 55.000 0.00 0.00 0.00 3.77
6685 7023 0.796312 CACCACATCTGTACCGCAAC 59.204 55.000 0.00 0.00 0.00 4.17
6686 7024 0.321210 CCACCACATCTGTACCGCAA 60.321 55.000 0.00 0.00 0.00 4.85
6687 7025 1.295101 CCACCACATCTGTACCGCA 59.705 57.895 0.00 0.00 0.00 5.69
6688 7026 2.106683 GCCACCACATCTGTACCGC 61.107 63.158 0.00 0.00 0.00 5.68
6689 7027 1.449601 GGCCACCACATCTGTACCG 60.450 63.158 0.00 0.00 0.00 4.02
6690 7028 1.077716 GGGCCACCACATCTGTACC 60.078 63.158 4.39 0.00 36.50 3.34
6691 7029 1.134491 GTAGGGCCACCACATCTGTAC 60.134 57.143 6.18 0.00 40.13 2.90
6692 7030 1.200519 GTAGGGCCACCACATCTGTA 58.799 55.000 6.18 0.00 40.13 2.74
6693 7031 1.899437 CGTAGGGCCACCACATCTGT 61.899 60.000 6.18 0.00 40.13 3.41
6694 7032 1.153369 CGTAGGGCCACCACATCTG 60.153 63.158 6.18 0.00 40.13 2.90
6695 7033 1.305802 TCGTAGGGCCACCACATCT 60.306 57.895 6.18 0.00 40.13 2.90
6696 7034 1.153429 GTCGTAGGGCCACCACATC 60.153 63.158 6.18 0.00 40.13 3.06
6697 7035 1.899437 CTGTCGTAGGGCCACCACAT 61.899 60.000 6.18 0.00 40.13 3.21
6698 7036 2.524640 TGTCGTAGGGCCACCACA 60.525 61.111 6.18 4.34 40.13 4.17
6699 7037 2.264794 CTGTCGTAGGGCCACCAC 59.735 66.667 6.18 1.47 40.13 4.16
6700 7038 3.000819 CCTGTCGTAGGGCCACCA 61.001 66.667 6.18 0.00 43.33 4.17
6707 7045 0.968901 TAGCACCACCCTGTCGTAGG 60.969 60.000 2.09 2.09 46.88 3.18
6708 7046 1.112113 ATAGCACCACCCTGTCGTAG 58.888 55.000 0.00 0.00 0.00 3.51
6709 7047 0.821517 CATAGCACCACCCTGTCGTA 59.178 55.000 0.00 0.00 0.00 3.43
6710 7048 1.596934 CATAGCACCACCCTGTCGT 59.403 57.895 0.00 0.00 0.00 4.34
6711 7049 1.815421 GCATAGCACCACCCTGTCG 60.815 63.158 0.00 0.00 0.00 4.35
6712 7050 1.815421 CGCATAGCACCACCCTGTC 60.815 63.158 0.00 0.00 0.00 3.51
6713 7051 2.268920 CGCATAGCACCACCCTGT 59.731 61.111 0.00 0.00 0.00 4.00
6739 7077 2.114670 CAATGCTGGTAGCCGGTGG 61.115 63.158 1.90 0.00 41.51 4.61
6740 7078 2.764314 GCAATGCTGGTAGCCGGTG 61.764 63.158 1.90 0.00 41.51 4.94
6741 7079 2.438434 GCAATGCTGGTAGCCGGT 60.438 61.111 1.90 0.00 41.51 5.28
6742 7080 1.386525 ATTGCAATGCTGGTAGCCGG 61.387 55.000 12.09 0.00 41.51 6.13
6743 7081 0.029834 GATTGCAATGCTGGTAGCCG 59.970 55.000 18.59 0.00 41.51 5.52
6744 7082 0.029834 CGATTGCAATGCTGGTAGCC 59.970 55.000 18.59 0.00 41.51 3.93
6745 7083 0.593263 GCGATTGCAATGCTGGTAGC 60.593 55.000 18.59 0.17 40.84 3.58
6746 7084 3.539253 GCGATTGCAATGCTGGTAG 57.461 52.632 18.59 0.00 42.15 3.18
6757 7095 3.142838 ACATGGGGCTGCGATTGC 61.143 61.111 0.00 0.00 43.20 3.56
6758 7096 2.802792 CACATGGGGCTGCGATTG 59.197 61.111 0.00 0.00 0.00 2.67
6759 7097 3.142838 GCACATGGGGCTGCGATT 61.143 61.111 0.00 0.00 0.00 3.34
6760 7098 3.650298 AAGCACATGGGGCTGCGAT 62.650 57.895 13.95 0.00 41.66 4.58
6761 7099 4.349503 AAGCACATGGGGCTGCGA 62.350 61.111 13.95 0.00 41.66 5.10
6762 7100 3.818787 GAAGCACATGGGGCTGCG 61.819 66.667 13.95 0.00 41.66 5.18
6763 7101 2.277591 TTGAAGCACATGGGGCTGC 61.278 57.895 13.95 12.75 41.66 5.25
6764 7102 1.588082 GTTGAAGCACATGGGGCTG 59.412 57.895 13.95 0.00 41.66 4.85
6765 7103 1.973281 CGTTGAAGCACATGGGGCT 60.973 57.895 8.19 8.19 45.15 5.19
6766 7104 2.568090 CGTTGAAGCACATGGGGC 59.432 61.111 0.00 0.00 0.00 5.80
6767 7105 0.322098 TACCGTTGAAGCACATGGGG 60.322 55.000 0.00 0.00 0.00 4.96
6768 7106 1.086696 CTACCGTTGAAGCACATGGG 58.913 55.000 0.00 0.00 0.00 4.00
6769 7107 1.464608 CACTACCGTTGAAGCACATGG 59.535 52.381 0.00 0.00 0.00 3.66
6770 7108 1.135972 GCACTACCGTTGAAGCACATG 60.136 52.381 0.00 0.00 0.00 3.21
6771 7109 1.156736 GCACTACCGTTGAAGCACAT 58.843 50.000 0.00 0.00 0.00 3.21
6772 7110 0.882927 GGCACTACCGTTGAAGCACA 60.883 55.000 0.00 0.00 0.00 4.57
6773 7111 1.574702 GGGCACTACCGTTGAAGCAC 61.575 60.000 0.00 0.00 40.62 4.40
6774 7112 1.302192 GGGCACTACCGTTGAAGCA 60.302 57.895 0.00 0.00 40.62 3.91
6775 7113 3.574780 GGGCACTACCGTTGAAGC 58.425 61.111 0.00 0.00 40.62 3.86
6783 7121 4.438346 CAGTATGCGGGCACTACC 57.562 61.111 0.00 0.00 37.93 3.18
6801 7139 4.530857 GGTCGGTCGCCATGAGGG 62.531 72.222 0.00 0.00 40.85 4.30
6802 7140 4.873129 CGGTCGGTCGCCATGAGG 62.873 72.222 0.00 0.00 38.23 3.86
6837 7175 4.554363 ATCGCCTTCCGCTCGTCG 62.554 66.667 0.00 0.00 36.73 5.12
6838 7176 2.956964 CATCGCCTTCCGCTCGTC 60.957 66.667 0.00 0.00 36.73 4.20
6839 7177 3.296709 AACATCGCCTTCCGCTCGT 62.297 57.895 0.00 0.00 36.73 4.18
6840 7178 2.509336 AACATCGCCTTCCGCTCG 60.509 61.111 0.00 0.00 36.73 5.03
6841 7179 0.459585 TACAACATCGCCTTCCGCTC 60.460 55.000 0.00 0.00 36.73 5.03
6842 7180 0.739813 GTACAACATCGCCTTCCGCT 60.740 55.000 0.00 0.00 36.73 5.52
6843 7181 1.017177 TGTACAACATCGCCTTCCGC 61.017 55.000 0.00 0.00 36.73 5.54
6844 7182 1.127951 GTTGTACAACATCGCCTTCCG 59.872 52.381 29.46 0.00 40.84 4.30
6845 7183 1.467342 GGTTGTACAACATCGCCTTCC 59.533 52.381 33.42 14.27 42.85 3.46
6846 7184 1.127951 CGGTTGTACAACATCGCCTTC 59.872 52.381 33.42 16.47 42.85 3.46
6847 7185 1.153353 CGGTTGTACAACATCGCCTT 58.847 50.000 33.42 0.00 42.85 4.35
6848 7186 0.672401 CCGGTTGTACAACATCGCCT 60.672 55.000 33.42 0.00 42.85 5.52
6849 7187 1.791662 CCGGTTGTACAACATCGCC 59.208 57.895 33.42 18.82 42.85 5.54
6850 7188 1.133869 GCCGGTTGTACAACATCGC 59.866 57.895 33.42 26.63 42.85 4.58
6851 7189 1.009903 TCGCCGGTTGTACAACATCG 61.010 55.000 33.42 29.40 42.85 3.84
6852 7190 1.127951 CTTCGCCGGTTGTACAACATC 59.872 52.381 33.42 21.80 42.85 3.06
6853 7191 1.153353 CTTCGCCGGTTGTACAACAT 58.847 50.000 33.42 0.00 42.85 2.71
6854 7192 1.500512 GCTTCGCCGGTTGTACAACA 61.501 55.000 33.42 15.01 42.85 3.33
6855 7193 1.205820 GCTTCGCCGGTTGTACAAC 59.794 57.895 27.20 27.20 40.45 3.32
6856 7194 0.317799 TAGCTTCGCCGGTTGTACAA 59.682 50.000 3.59 3.59 0.00 2.41
6857 7195 0.108992 CTAGCTTCGCCGGTTGTACA 60.109 55.000 1.90 0.00 0.00 2.90
6858 7196 0.171903 TCTAGCTTCGCCGGTTGTAC 59.828 55.000 1.90 0.00 0.00 2.90
6859 7197 0.454600 CTCTAGCTTCGCCGGTTGTA 59.545 55.000 1.90 0.00 0.00 2.41
6860 7198 1.215647 CTCTAGCTTCGCCGGTTGT 59.784 57.895 1.90 0.00 0.00 3.32
6861 7199 2.167861 GCTCTAGCTTCGCCGGTTG 61.168 63.158 1.90 0.00 38.21 3.77
6862 7200 2.184579 GCTCTAGCTTCGCCGGTT 59.815 61.111 1.90 0.00 38.21 4.44
6872 7210 4.732938 GCATTTGTTGATTCCAGCTCTAGC 60.733 45.833 0.00 0.00 42.49 3.42
6873 7211 4.639310 AGCATTTGTTGATTCCAGCTCTAG 59.361 41.667 0.00 0.00 0.00 2.43
6874 7212 4.592942 AGCATTTGTTGATTCCAGCTCTA 58.407 39.130 0.00 0.00 0.00 2.43
6875 7213 3.428532 AGCATTTGTTGATTCCAGCTCT 58.571 40.909 0.00 0.00 0.00 4.09
6876 7214 3.863142 AGCATTTGTTGATTCCAGCTC 57.137 42.857 0.00 0.00 0.00 4.09
6877 7215 4.081406 TGTAGCATTTGTTGATTCCAGCT 58.919 39.130 0.00 0.00 35.06 4.24
6878 7216 4.439305 TGTAGCATTTGTTGATTCCAGC 57.561 40.909 0.00 0.00 0.00 4.85
6879 7217 4.802039 GCATGTAGCATTTGTTGATTCCAG 59.198 41.667 0.00 0.00 44.79 3.86
6880 7218 4.746729 GCATGTAGCATTTGTTGATTCCA 58.253 39.130 0.00 0.00 44.79 3.53
6894 7232 2.409870 GCAGTGGTGGGCATGTAGC 61.410 63.158 0.00 0.00 44.65 3.58
6895 7233 1.002257 TGCAGTGGTGGGCATGTAG 60.002 57.895 0.00 0.00 34.58 2.74
6896 7234 1.002257 CTGCAGTGGTGGGCATGTA 60.002 57.895 5.25 0.00 39.65 2.29
6897 7235 2.282674 CTGCAGTGGTGGGCATGT 60.283 61.111 5.25 0.00 39.65 3.21
6898 7236 3.066190 CCTGCAGTGGTGGGCATG 61.066 66.667 13.81 0.00 39.65 4.06
6901 7239 3.984193 CTAGCCTGCAGTGGTGGGC 62.984 68.421 13.81 8.76 44.38 5.36
6902 7240 2.249413 CTCTAGCCTGCAGTGGTGGG 62.249 65.000 13.81 0.00 0.00 4.61
6903 7241 1.220206 CTCTAGCCTGCAGTGGTGG 59.780 63.158 13.81 11.61 0.00 4.61
6904 7242 1.449246 GCTCTAGCCTGCAGTGGTG 60.449 63.158 13.81 0.00 34.31 4.17
6905 7243 0.324738 TAGCTCTAGCCTGCAGTGGT 60.325 55.000 13.81 12.10 43.38 4.16
6906 7244 0.388659 CTAGCTCTAGCCTGCAGTGG 59.611 60.000 13.81 0.00 43.38 4.00
6907 7245 3.963676 CTAGCTCTAGCCTGCAGTG 57.036 57.895 13.81 5.37 43.38 3.66
6933 7271 2.639286 GGACGGTTTGCAGCACTG 59.361 61.111 0.00 5.58 0.00 3.66
6934 7272 2.972505 CGGACGGTTTGCAGCACT 60.973 61.111 0.00 0.00 0.00 4.40
6935 7273 4.683334 GCGGACGGTTTGCAGCAC 62.683 66.667 0.00 0.00 0.00 4.40
6941 7279 4.676586 GGTTGCGCGGACGGTTTG 62.677 66.667 8.83 0.00 40.57 2.93
6942 7280 4.922026 AGGTTGCGCGGACGGTTT 62.922 61.111 8.83 0.00 40.57 3.27
6945 7283 4.728102 TACAGGTTGCGCGGACGG 62.728 66.667 8.83 0.00 40.57 4.79
6946 7284 1.632046 AAATACAGGTTGCGCGGACG 61.632 55.000 8.83 0.00 44.07 4.79
6947 7285 0.519961 AAAATACAGGTTGCGCGGAC 59.480 50.000 8.83 3.71 0.00 4.79
6948 7286 1.240256 AAAAATACAGGTTGCGCGGA 58.760 45.000 8.83 0.00 0.00 5.54
6949 7287 3.784845 AAAAATACAGGTTGCGCGG 57.215 47.368 8.83 0.00 0.00 6.46
6966 7304 0.675633 GAAGCCAGCTCCAGCAAAAA 59.324 50.000 0.48 0.00 45.16 1.94
6967 7305 1.181098 GGAAGCCAGCTCCAGCAAAA 61.181 55.000 0.48 0.00 45.16 2.44
6968 7306 1.604593 GGAAGCCAGCTCCAGCAAA 60.605 57.895 0.48 0.00 45.16 3.68
6969 7307 2.034687 GGAAGCCAGCTCCAGCAA 59.965 61.111 0.48 0.00 45.16 3.91
6970 7308 3.251509 TGGAAGCCAGCTCCAGCA 61.252 61.111 0.48 0.00 45.16 4.41
6971 7309 2.749441 GTGGAAGCCAGCTCCAGC 60.749 66.667 10.01 0.00 42.49 4.85
6983 7321 1.896660 GGTTGCAGCTTCGGTGGAA 60.897 57.895 0.00 0.00 38.87 3.53
6984 7322 2.281484 GGTTGCAGCTTCGGTGGA 60.281 61.111 0.00 0.00 0.00 4.02
6985 7323 3.726517 CGGTTGCAGCTTCGGTGG 61.727 66.667 0.00 0.00 0.00 4.61
6986 7324 3.726517 CCGGTTGCAGCTTCGGTG 61.727 66.667 9.53 0.00 37.92 4.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.