Multiple sequence alignment - TraesCS6A01G101100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G101100 chr6A 100.000 3512 0 0 1 3512 69131561 69135072 0.000000e+00 6486
1 TraesCS6A01G101100 chr6A 96.789 436 14 0 1 436 17576974 17576539 0.000000e+00 728
2 TraesCS6A01G101100 chr6D 90.136 2940 236 30 599 3512 55628648 55631559 0.000000e+00 3773
3 TraesCS6A01G101100 chr6D 90.443 2030 175 8 955 2970 55403730 55405754 0.000000e+00 2656
4 TraesCS6A01G101100 chr6D 92.734 1335 90 6 956 2285 55312196 55313528 0.000000e+00 1921
5 TraesCS6A01G101100 chr6D 88.073 1484 155 16 1009 2479 55104884 55106358 0.000000e+00 1740
6 TraesCS6A01G101100 chr6D 94.751 1105 52 4 2320 3420 55315170 55316272 0.000000e+00 1714
7 TraesCS6A01G101100 chr6D 82.005 1456 246 12 995 2439 48468838 48467388 0.000000e+00 1223
8 TraesCS6A01G101100 chr6D 86.604 963 89 23 2475 3420 55106516 55107455 0.000000e+00 1027
9 TraesCS6A01G101100 chr6D 94.840 407 10 1 3106 3512 55405839 55406234 2.980000e-175 625
10 TraesCS6A01G101100 chr6D 83.378 373 47 10 599 965 55104443 55104806 7.270000e-87 331
11 TraesCS6A01G101100 chr6D 79.537 518 52 25 464 966 55403231 55403709 1.570000e-83 320
12 TraesCS6A01G101100 chr6D 87.121 132 11 3 451 582 55628534 55628659 1.020000e-30 145
13 TraesCS6A01G101100 chr6B 88.906 2542 229 25 469 2970 125404392 125406920 0.000000e+00 3083
14 TraesCS6A01G101100 chr6B 86.257 2423 275 43 1030 3420 125336252 125338648 0.000000e+00 2577
15 TraesCS6A01G101100 chr6B 87.203 1516 171 16 979 2479 125379560 125381067 0.000000e+00 1703
16 TraesCS6A01G101100 chr6B 81.369 1476 254 18 995 2458 123206272 123204806 0.000000e+00 1182
17 TraesCS6A01G101100 chr6B 86.450 952 89 25 2475 3420 125381215 125382132 0.000000e+00 1007
18 TraesCS6A01G101100 chr6B 95.636 527 18 4 2989 3512 125407024 125407548 0.000000e+00 841
19 TraesCS6A01G101100 chr6B 91.667 348 23 3 599 942 125370336 125370681 8.820000e-131 477
20 TraesCS6A01G101100 chr6B 84.703 438 63 3 3 438 138659905 138659470 5.380000e-118 435
21 TraesCS6A01G101100 chr6B 84.254 362 47 7 599 957 125335789 125336143 9.330000e-91 344
22 TraesCS6A01G101100 chr6B 94.954 218 11 0 3295 3512 125339193 125339410 3.360000e-90 342
23 TraesCS6A01G101100 chr6B 88.066 243 20 4 451 687 125361013 125361252 2.670000e-71 279
24 TraesCS6A01G101100 chr7A 89.885 435 42 1 3 437 733355639 733355207 3.060000e-155 558
25 TraesCS6A01G101100 chr3A 89.679 436 43 2 3 437 712872716 712873150 3.960000e-154 555
26 TraesCS6A01G101100 chr3A 88.101 437 50 1 3 437 712940219 712940655 5.200000e-143 518
27 TraesCS6A01G101100 chr5B 86.270 437 56 3 3 437 82451983 82452417 4.100000e-129 472
28 TraesCS6A01G101100 chr5B 81.446 415 74 3 13 426 589864493 589864905 1.560000e-88 337
29 TraesCS6A01G101100 chrUn 84.475 438 64 3 3 438 194983385 194983820 2.500000e-116 429
30 TraesCS6A01G101100 chr4A 80.510 431 77 5 5 430 648290078 648289650 1.220000e-84 324


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G101100 chr6A 69131561 69135072 3511 False 6486.000000 6486 100.000000 1 3512 1 chr6A.!!$F1 3511
1 TraesCS6A01G101100 chr6D 55628534 55631559 3025 False 1959.000000 3773 88.628500 451 3512 2 chr6D.!!$F4 3061
2 TraesCS6A01G101100 chr6D 55312196 55316272 4076 False 1817.500000 1921 93.742500 956 3420 2 chr6D.!!$F2 2464
3 TraesCS6A01G101100 chr6D 48467388 48468838 1450 True 1223.000000 1223 82.005000 995 2439 1 chr6D.!!$R1 1444
4 TraesCS6A01G101100 chr6D 55403231 55406234 3003 False 1200.333333 2656 88.273333 464 3512 3 chr6D.!!$F3 3048
5 TraesCS6A01G101100 chr6D 55104443 55107455 3012 False 1032.666667 1740 86.018333 599 3420 3 chr6D.!!$F1 2821
6 TraesCS6A01G101100 chr6B 125404392 125407548 3156 False 1962.000000 3083 92.271000 469 3512 2 chr6B.!!$F5 3043
7 TraesCS6A01G101100 chr6B 125379560 125382132 2572 False 1355.000000 1703 86.826500 979 3420 2 chr6B.!!$F4 2441
8 TraesCS6A01G101100 chr6B 123204806 123206272 1466 True 1182.000000 1182 81.369000 995 2458 1 chr6B.!!$R1 1463
9 TraesCS6A01G101100 chr6B 125335789 125339410 3621 False 1087.666667 2577 88.488333 599 3512 3 chr6B.!!$F3 2913

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
836 860 0.033504 TCTGTGCTGAAGGTTCGACC 59.966 55.000 0.00 0.00 38.99 4.79 F
1609 1723 0.043334 AGCTGACCACTACCCTGGAT 59.957 55.000 0.00 0.00 35.04 3.41 F
1970 2087 3.230134 ACTACCTTTGCAAGCATGGAAA 58.770 40.909 17.46 8.34 43.51 3.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2005 2122 1.566231 AGGTTTATGGCCCTTCTCAGG 59.434 52.381 0.00 0.00 40.45 3.86 R
2473 4202 2.301870 GTTGTGTCATGAGGTACCCTGA 59.698 50.000 8.74 6.81 31.76 3.86 R
3269 5264 3.598019 TTCCGAACCTGTGGTGTATAC 57.402 47.619 0.00 0.00 35.34 1.47 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.383620 AGTGAGACAGACAAGCTCTTG 57.616 47.619 7.99 7.99 45.58 3.02
22 23 2.036992 AGTGAGACAGACAAGCTCTTGG 59.963 50.000 13.48 0.00 44.45 3.61
23 24 2.036475 GTGAGACAGACAAGCTCTTGGA 59.964 50.000 13.48 0.00 44.45 3.53
24 25 2.036475 TGAGACAGACAAGCTCTTGGAC 59.964 50.000 13.48 7.52 44.45 4.02
25 26 2.298729 GAGACAGACAAGCTCTTGGACT 59.701 50.000 13.48 9.36 44.45 3.85
26 27 2.036992 AGACAGACAAGCTCTTGGACTG 59.963 50.000 23.47 23.47 45.22 3.51
27 28 1.765314 ACAGACAAGCTCTTGGACTGT 59.235 47.619 24.30 24.30 46.32 3.55
28 29 2.411904 CAGACAAGCTCTTGGACTGTC 58.588 52.381 20.12 4.60 44.45 3.51
29 30 1.346068 AGACAAGCTCTTGGACTGTCC 59.654 52.381 19.96 19.96 44.45 4.02
30 31 0.034059 ACAAGCTCTTGGACTGTCCG 59.966 55.000 21.15 8.73 44.45 4.79
31 32 0.318441 CAAGCTCTTGGACTGTCCGA 59.682 55.000 21.15 18.51 40.17 4.55
33 34 1.216710 GCTCTTGGACTGTCCGAGG 59.783 63.158 33.53 26.28 46.14 4.63
34 35 1.893786 CTCTTGGACTGTCCGAGGG 59.106 63.158 33.53 29.97 46.14 4.30
35 36 2.232298 CTCTTGGACTGTCCGAGGGC 62.232 65.000 33.53 8.15 46.14 5.19
36 37 3.649277 CTTGGACTGTCCGAGGGCG 62.649 68.421 29.27 10.68 43.09 6.13
37 38 4.671590 TGGACTGTCCGAGGGCGA 62.672 66.667 21.15 0.00 40.17 5.54
38 39 4.131088 GGACTGTCCGAGGGCGAC 62.131 72.222 11.71 0.00 40.82 5.19
50 51 4.754667 GGCGACCCAACCCTCGAC 62.755 72.222 0.00 0.00 31.24 4.20
51 52 3.998672 GCGACCCAACCCTCGACA 61.999 66.667 0.00 0.00 31.24 4.35
52 53 2.261671 CGACCCAACCCTCGACAG 59.738 66.667 0.00 0.00 31.24 3.51
53 54 2.571216 CGACCCAACCCTCGACAGT 61.571 63.158 0.00 0.00 31.24 3.55
54 55 1.752833 GACCCAACCCTCGACAGTT 59.247 57.895 0.00 0.00 0.00 3.16
55 56 0.320508 GACCCAACCCTCGACAGTTC 60.321 60.000 0.00 0.00 0.00 3.01
56 57 1.003718 CCCAACCCTCGACAGTTCC 60.004 63.158 0.00 0.00 0.00 3.62
57 58 1.752198 CCAACCCTCGACAGTTCCA 59.248 57.895 0.00 0.00 0.00 3.53
58 59 0.107831 CCAACCCTCGACAGTTCCAA 59.892 55.000 0.00 0.00 0.00 3.53
59 60 1.226746 CAACCCTCGACAGTTCCAAC 58.773 55.000 0.00 0.00 0.00 3.77
60 61 0.834612 AACCCTCGACAGTTCCAACA 59.165 50.000 0.00 0.00 0.00 3.33
61 62 1.056660 ACCCTCGACAGTTCCAACAT 58.943 50.000 0.00 0.00 0.00 2.71
62 63 2.253610 ACCCTCGACAGTTCCAACATA 58.746 47.619 0.00 0.00 0.00 2.29
63 64 2.838202 ACCCTCGACAGTTCCAACATAT 59.162 45.455 0.00 0.00 0.00 1.78
64 65 3.118738 ACCCTCGACAGTTCCAACATATC 60.119 47.826 0.00 0.00 0.00 1.63
65 66 3.118775 CCCTCGACAGTTCCAACATATCA 60.119 47.826 0.00 0.00 0.00 2.15
66 67 4.443457 CCCTCGACAGTTCCAACATATCAT 60.443 45.833 0.00 0.00 0.00 2.45
67 68 5.118990 CCTCGACAGTTCCAACATATCATT 58.881 41.667 0.00 0.00 0.00 2.57
68 69 5.586243 CCTCGACAGTTCCAACATATCATTT 59.414 40.000 0.00 0.00 0.00 2.32
69 70 6.094048 CCTCGACAGTTCCAACATATCATTTT 59.906 38.462 0.00 0.00 0.00 1.82
70 71 7.072177 TCGACAGTTCCAACATATCATTTTC 57.928 36.000 0.00 0.00 0.00 2.29
71 72 6.652900 TCGACAGTTCCAACATATCATTTTCA 59.347 34.615 0.00 0.00 0.00 2.69
72 73 7.336679 TCGACAGTTCCAACATATCATTTTCAT 59.663 33.333 0.00 0.00 0.00 2.57
73 74 7.430211 CGACAGTTCCAACATATCATTTTCATG 59.570 37.037 0.00 0.00 0.00 3.07
74 75 7.549839 ACAGTTCCAACATATCATTTTCATGG 58.450 34.615 0.00 0.00 0.00 3.66
75 76 6.477688 CAGTTCCAACATATCATTTTCATGGC 59.522 38.462 0.00 0.00 0.00 4.40
76 77 6.381994 AGTTCCAACATATCATTTTCATGGCT 59.618 34.615 0.00 0.00 0.00 4.75
77 78 6.395426 TCCAACATATCATTTTCATGGCTC 57.605 37.500 0.00 0.00 0.00 4.70
78 79 5.302568 TCCAACATATCATTTTCATGGCTCC 59.697 40.000 0.00 0.00 0.00 4.70
79 80 5.303589 CCAACATATCATTTTCATGGCTCCT 59.696 40.000 0.00 0.00 0.00 3.69
80 81 6.213677 CAACATATCATTTTCATGGCTCCTG 58.786 40.000 0.00 0.00 0.00 3.86
81 82 5.698104 ACATATCATTTTCATGGCTCCTGA 58.302 37.500 0.00 0.00 0.00 3.86
82 83 5.533903 ACATATCATTTTCATGGCTCCTGAC 59.466 40.000 0.00 0.00 0.00 3.51
83 84 2.358957 TCATTTTCATGGCTCCTGACG 58.641 47.619 0.00 0.00 0.00 4.35
84 85 1.402968 CATTTTCATGGCTCCTGACGG 59.597 52.381 0.00 0.00 0.00 4.79
85 86 0.322456 TTTTCATGGCTCCTGACGGG 60.322 55.000 0.00 0.00 0.00 5.28
86 87 2.819984 TTTCATGGCTCCTGACGGGC 62.820 60.000 0.00 0.00 34.39 6.13
117 118 4.308458 CCCGTCAGTTGACCGGCA 62.308 66.667 0.00 0.00 41.86 5.69
118 119 2.738521 CCGTCAGTTGACCGGCAG 60.739 66.667 0.00 0.00 41.86 4.85
119 120 3.414700 CGTCAGTTGACCGGCAGC 61.415 66.667 0.00 2.57 41.86 5.25
120 121 3.050275 GTCAGTTGACCGGCAGCC 61.050 66.667 0.00 0.00 39.07 4.85
121 122 4.329545 TCAGTTGACCGGCAGCCC 62.330 66.667 5.63 0.00 0.00 5.19
137 138 4.176752 CCCAGGGCCGGTAGCTTC 62.177 72.222 1.90 0.00 43.05 3.86
138 139 4.176752 CCAGGGCCGGTAGCTTCC 62.177 72.222 1.90 0.00 43.05 3.46
139 140 3.083997 CAGGGCCGGTAGCTTCCT 61.084 66.667 7.87 0.00 43.05 3.36
140 141 2.285442 AGGGCCGGTAGCTTCCTT 60.285 61.111 7.87 0.00 43.05 3.36
141 142 2.124695 GGGCCGGTAGCTTCCTTG 60.125 66.667 7.87 0.00 43.05 3.61
142 143 2.124695 GGCCGGTAGCTTCCTTGG 60.125 66.667 7.87 3.49 43.05 3.61
143 144 2.824489 GCCGGTAGCTTCCTTGGC 60.824 66.667 11.54 11.54 38.99 4.52
144 145 2.668632 CCGGTAGCTTCCTTGGCA 59.331 61.111 7.87 0.00 0.00 4.92
145 146 1.450312 CCGGTAGCTTCCTTGGCAG 60.450 63.158 7.87 0.00 0.00 4.85
146 147 1.296715 CGGTAGCTTCCTTGGCAGT 59.703 57.895 7.87 0.00 0.00 4.40
147 148 1.021390 CGGTAGCTTCCTTGGCAGTG 61.021 60.000 7.87 0.00 0.00 3.66
148 149 0.036875 GGTAGCTTCCTTGGCAGTGT 59.963 55.000 1.39 0.00 0.00 3.55
149 150 1.443802 GTAGCTTCCTTGGCAGTGTC 58.556 55.000 0.00 0.00 0.00 3.67
150 151 0.324943 TAGCTTCCTTGGCAGTGTCC 59.675 55.000 0.00 0.00 0.00 4.02
151 152 1.073897 GCTTCCTTGGCAGTGTCCT 59.926 57.895 0.00 0.00 0.00 3.85
152 153 0.957888 GCTTCCTTGGCAGTGTCCTC 60.958 60.000 0.00 0.00 0.00 3.71
153 154 0.397941 CTTCCTTGGCAGTGTCCTCA 59.602 55.000 0.00 0.00 0.00 3.86
154 155 0.843309 TTCCTTGGCAGTGTCCTCAA 59.157 50.000 0.00 0.00 0.00 3.02
155 156 0.108585 TCCTTGGCAGTGTCCTCAAC 59.891 55.000 0.00 0.00 0.00 3.18
156 157 0.179020 CCTTGGCAGTGTCCTCAACA 60.179 55.000 0.00 0.00 34.78 3.33
157 158 1.546323 CCTTGGCAGTGTCCTCAACAT 60.546 52.381 0.00 0.00 40.80 2.71
158 159 1.808945 CTTGGCAGTGTCCTCAACATC 59.191 52.381 0.00 0.00 40.80 3.06
159 160 1.059098 TGGCAGTGTCCTCAACATCT 58.941 50.000 0.00 0.00 40.80 2.90
160 161 1.002430 TGGCAGTGTCCTCAACATCTC 59.998 52.381 0.00 0.00 40.80 2.75
161 162 1.277557 GGCAGTGTCCTCAACATCTCT 59.722 52.381 0.00 0.00 40.80 3.10
162 163 2.615869 GCAGTGTCCTCAACATCTCTC 58.384 52.381 0.00 0.00 40.80 3.20
163 164 2.233431 GCAGTGTCCTCAACATCTCTCT 59.767 50.000 0.00 0.00 40.80 3.10
164 165 3.675775 GCAGTGTCCTCAACATCTCTCTC 60.676 52.174 0.00 0.00 40.80 3.20
165 166 3.096092 AGTGTCCTCAACATCTCTCTCC 58.904 50.000 0.00 0.00 40.80 3.71
166 167 3.096092 GTGTCCTCAACATCTCTCTCCT 58.904 50.000 0.00 0.00 40.80 3.69
167 168 3.130340 GTGTCCTCAACATCTCTCTCCTC 59.870 52.174 0.00 0.00 40.80 3.71
168 169 2.693074 GTCCTCAACATCTCTCTCCTCC 59.307 54.545 0.00 0.00 0.00 4.30
169 170 2.038659 CCTCAACATCTCTCTCCTCCC 58.961 57.143 0.00 0.00 0.00 4.30
170 171 2.038659 CTCAACATCTCTCTCCTCCCC 58.961 57.143 0.00 0.00 0.00 4.81
171 172 1.648568 TCAACATCTCTCTCCTCCCCT 59.351 52.381 0.00 0.00 0.00 4.79
172 173 2.859404 TCAACATCTCTCTCCTCCCCTA 59.141 50.000 0.00 0.00 0.00 3.53
173 174 2.962421 CAACATCTCTCTCCTCCCCTAC 59.038 54.545 0.00 0.00 0.00 3.18
174 175 2.218673 ACATCTCTCTCCTCCCCTACA 58.781 52.381 0.00 0.00 0.00 2.74
175 176 2.176798 ACATCTCTCTCCTCCCCTACAG 59.823 54.545 0.00 0.00 0.00 2.74
176 177 2.288598 TCTCTCTCCTCCCCTACAGA 57.711 55.000 0.00 0.00 0.00 3.41
177 178 2.795556 TCTCTCTCCTCCCCTACAGAT 58.204 52.381 0.00 0.00 0.00 2.90
178 179 3.135279 TCTCTCTCCTCCCCTACAGATT 58.865 50.000 0.00 0.00 0.00 2.40
179 180 3.139397 TCTCTCTCCTCCCCTACAGATTC 59.861 52.174 0.00 0.00 0.00 2.52
180 181 3.135279 TCTCTCCTCCCCTACAGATTCT 58.865 50.000 0.00 0.00 0.00 2.40
181 182 3.139397 TCTCTCCTCCCCTACAGATTCTC 59.861 52.174 0.00 0.00 0.00 2.87
182 183 3.135279 TCTCCTCCCCTACAGATTCTCT 58.865 50.000 0.00 0.00 0.00 3.10
183 184 3.139397 TCTCCTCCCCTACAGATTCTCTC 59.861 52.174 0.00 0.00 0.00 3.20
184 185 2.178106 TCCTCCCCTACAGATTCTCTCC 59.822 54.545 0.00 0.00 0.00 3.71
185 186 2.178984 CCTCCCCTACAGATTCTCTCCT 59.821 54.545 0.00 0.00 0.00 3.69
186 187 3.374762 CCTCCCCTACAGATTCTCTCCTT 60.375 52.174 0.00 0.00 0.00 3.36
187 188 3.895041 CTCCCCTACAGATTCTCTCCTTC 59.105 52.174 0.00 0.00 0.00 3.46
188 189 3.533907 TCCCCTACAGATTCTCTCCTTCT 59.466 47.826 0.00 0.00 0.00 2.85
189 190 4.732443 TCCCCTACAGATTCTCTCCTTCTA 59.268 45.833 0.00 0.00 0.00 2.10
190 191 4.830600 CCCCTACAGATTCTCTCCTTCTAC 59.169 50.000 0.00 0.00 0.00 2.59
191 192 4.830600 CCCTACAGATTCTCTCCTTCTACC 59.169 50.000 0.00 0.00 0.00 3.18
192 193 4.830600 CCTACAGATTCTCTCCTTCTACCC 59.169 50.000 0.00 0.00 0.00 3.69
193 194 4.618378 ACAGATTCTCTCCTTCTACCCT 57.382 45.455 0.00 0.00 0.00 4.34
194 195 4.542697 ACAGATTCTCTCCTTCTACCCTC 58.457 47.826 0.00 0.00 0.00 4.30
195 196 4.017037 ACAGATTCTCTCCTTCTACCCTCA 60.017 45.833 0.00 0.00 0.00 3.86
196 197 4.959210 CAGATTCTCTCCTTCTACCCTCAA 59.041 45.833 0.00 0.00 0.00 3.02
197 198 4.959839 AGATTCTCTCCTTCTACCCTCAAC 59.040 45.833 0.00 0.00 0.00 3.18
198 199 3.103080 TCTCTCCTTCTACCCTCAACC 57.897 52.381 0.00 0.00 0.00 3.77
199 200 2.382305 TCTCTCCTTCTACCCTCAACCA 59.618 50.000 0.00 0.00 0.00 3.67
200 201 2.498078 CTCTCCTTCTACCCTCAACCAC 59.502 54.545 0.00 0.00 0.00 4.16
201 202 1.555533 CTCCTTCTACCCTCAACCACC 59.444 57.143 0.00 0.00 0.00 4.61
202 203 1.151413 TCCTTCTACCCTCAACCACCT 59.849 52.381 0.00 0.00 0.00 4.00
203 204 1.555533 CCTTCTACCCTCAACCACCTC 59.444 57.143 0.00 0.00 0.00 3.85
204 205 1.555533 CTTCTACCCTCAACCACCTCC 59.444 57.143 0.00 0.00 0.00 4.30
205 206 0.790993 TCTACCCTCAACCACCTCCT 59.209 55.000 0.00 0.00 0.00 3.69
206 207 1.196012 CTACCCTCAACCACCTCCTC 58.804 60.000 0.00 0.00 0.00 3.71
207 208 0.490017 TACCCTCAACCACCTCCTCA 59.510 55.000 0.00 0.00 0.00 3.86
208 209 1.128188 ACCCTCAACCACCTCCTCAC 61.128 60.000 0.00 0.00 0.00 3.51
209 210 1.679898 CCTCAACCACCTCCTCACC 59.320 63.158 0.00 0.00 0.00 4.02
210 211 1.127567 CCTCAACCACCTCCTCACCA 61.128 60.000 0.00 0.00 0.00 4.17
211 212 0.035458 CTCAACCACCTCCTCACCAC 59.965 60.000 0.00 0.00 0.00 4.16
212 213 1.073199 CAACCACCTCCTCACCACC 59.927 63.158 0.00 0.00 0.00 4.61
213 214 1.385347 AACCACCTCCTCACCACCA 60.385 57.895 0.00 0.00 0.00 4.17
214 215 0.772124 AACCACCTCCTCACCACCAT 60.772 55.000 0.00 0.00 0.00 3.55
215 216 1.201429 ACCACCTCCTCACCACCATC 61.201 60.000 0.00 0.00 0.00 3.51
216 217 0.911525 CCACCTCCTCACCACCATCT 60.912 60.000 0.00 0.00 0.00 2.90
217 218 1.622449 CCACCTCCTCACCACCATCTA 60.622 57.143 0.00 0.00 0.00 1.98
218 219 1.482593 CACCTCCTCACCACCATCTAC 59.517 57.143 0.00 0.00 0.00 2.59
219 220 1.362932 ACCTCCTCACCACCATCTACT 59.637 52.381 0.00 0.00 0.00 2.57
220 221 2.225650 ACCTCCTCACCACCATCTACTT 60.226 50.000 0.00 0.00 0.00 2.24
221 222 2.432510 CCTCCTCACCACCATCTACTTC 59.567 54.545 0.00 0.00 0.00 3.01
222 223 2.432510 CTCCTCACCACCATCTACTTCC 59.567 54.545 0.00 0.00 0.00 3.46
223 224 2.044492 TCCTCACCACCATCTACTTCCT 59.956 50.000 0.00 0.00 0.00 3.36
224 225 2.432510 CCTCACCACCATCTACTTCCTC 59.567 54.545 0.00 0.00 0.00 3.71
225 226 3.370104 CTCACCACCATCTACTTCCTCT 58.630 50.000 0.00 0.00 0.00 3.69
226 227 3.099905 TCACCACCATCTACTTCCTCTG 58.900 50.000 0.00 0.00 0.00 3.35
227 228 2.834549 CACCACCATCTACTTCCTCTGT 59.165 50.000 0.00 0.00 0.00 3.41
228 229 3.261897 CACCACCATCTACTTCCTCTGTT 59.738 47.826 0.00 0.00 0.00 3.16
229 230 4.466370 CACCACCATCTACTTCCTCTGTTA 59.534 45.833 0.00 0.00 0.00 2.41
230 231 4.466726 ACCACCATCTACTTCCTCTGTTAC 59.533 45.833 0.00 0.00 0.00 2.50
231 232 4.466370 CCACCATCTACTTCCTCTGTTACA 59.534 45.833 0.00 0.00 0.00 2.41
232 233 5.129485 CCACCATCTACTTCCTCTGTTACAT 59.871 44.000 0.00 0.00 0.00 2.29
233 234 6.045318 CACCATCTACTTCCTCTGTTACATG 58.955 44.000 0.00 0.00 0.00 3.21
234 235 5.053145 CCATCTACTTCCTCTGTTACATGC 58.947 45.833 0.00 0.00 0.00 4.06
235 236 5.395657 CCATCTACTTCCTCTGTTACATGCA 60.396 44.000 0.00 0.00 0.00 3.96
236 237 5.073311 TCTACTTCCTCTGTTACATGCAC 57.927 43.478 0.00 0.00 0.00 4.57
237 238 3.769739 ACTTCCTCTGTTACATGCACA 57.230 42.857 0.00 0.00 0.00 4.57
238 239 3.668447 ACTTCCTCTGTTACATGCACAG 58.332 45.455 16.33 16.33 42.74 3.66
239 240 3.071602 ACTTCCTCTGTTACATGCACAGT 59.928 43.478 19.97 0.00 42.12 3.55
240 241 4.283467 ACTTCCTCTGTTACATGCACAGTA 59.717 41.667 19.97 9.93 42.12 2.74
241 242 4.456280 TCCTCTGTTACATGCACAGTAG 57.544 45.455 19.97 16.05 42.12 2.57
242 243 4.086457 TCCTCTGTTACATGCACAGTAGA 58.914 43.478 19.97 15.83 42.12 2.59
243 244 4.082190 TCCTCTGTTACATGCACAGTAGAC 60.082 45.833 19.97 0.00 42.12 2.59
244 245 4.177026 CTCTGTTACATGCACAGTAGACC 58.823 47.826 19.97 0.00 42.12 3.85
245 246 3.056107 TCTGTTACATGCACAGTAGACCC 60.056 47.826 19.97 0.00 42.12 4.46
246 247 2.635427 TGTTACATGCACAGTAGACCCA 59.365 45.455 0.00 0.00 0.00 4.51
247 248 3.263170 TGTTACATGCACAGTAGACCCAT 59.737 43.478 0.00 0.00 0.00 4.00
248 249 2.698855 ACATGCACAGTAGACCCATC 57.301 50.000 0.00 0.00 0.00 3.51
249 250 2.191400 ACATGCACAGTAGACCCATCT 58.809 47.619 0.00 0.00 39.15 2.90
250 251 3.374764 ACATGCACAGTAGACCCATCTA 58.625 45.455 0.00 0.00 36.29 1.98
251 252 3.774766 ACATGCACAGTAGACCCATCTAA 59.225 43.478 0.00 0.00 39.20 2.10
252 253 4.141846 ACATGCACAGTAGACCCATCTAAG 60.142 45.833 0.00 0.00 39.20 2.18
253 254 2.168521 TGCACAGTAGACCCATCTAAGC 59.831 50.000 0.00 0.00 39.20 3.09
254 255 2.483889 GCACAGTAGACCCATCTAAGCC 60.484 54.545 0.00 0.00 39.20 4.35
255 256 3.034635 CACAGTAGACCCATCTAAGCCT 58.965 50.000 0.00 0.00 39.20 4.58
256 257 4.215908 CACAGTAGACCCATCTAAGCCTA 58.784 47.826 0.00 0.00 39.20 3.93
257 258 4.038162 CACAGTAGACCCATCTAAGCCTAC 59.962 50.000 0.00 0.00 39.20 3.18
258 259 4.079096 ACAGTAGACCCATCTAAGCCTACT 60.079 45.833 0.00 0.00 39.20 2.57
259 260 5.133999 ACAGTAGACCCATCTAAGCCTACTA 59.866 44.000 0.00 0.00 39.20 1.82
260 261 5.474189 CAGTAGACCCATCTAAGCCTACTAC 59.526 48.000 0.00 0.00 39.20 2.73
261 262 4.537945 AGACCCATCTAAGCCTACTACA 57.462 45.455 0.00 0.00 31.46 2.74
262 263 4.475345 AGACCCATCTAAGCCTACTACAG 58.525 47.826 0.00 0.00 31.46 2.74
263 264 4.079096 AGACCCATCTAAGCCTACTACAGT 60.079 45.833 0.00 0.00 31.46 3.55
264 265 4.621769 ACCCATCTAAGCCTACTACAGTT 58.378 43.478 0.00 0.00 0.00 3.16
265 266 5.030820 ACCCATCTAAGCCTACTACAGTTT 58.969 41.667 0.00 0.00 0.00 2.66
266 267 5.128991 ACCCATCTAAGCCTACTACAGTTTC 59.871 44.000 0.00 0.00 0.00 2.78
267 268 5.128827 CCCATCTAAGCCTACTACAGTTTCA 59.871 44.000 0.00 0.00 0.00 2.69
268 269 6.351881 CCCATCTAAGCCTACTACAGTTTCAA 60.352 42.308 0.00 0.00 0.00 2.69
269 270 6.535508 CCATCTAAGCCTACTACAGTTTCAAC 59.464 42.308 0.00 0.00 0.00 3.18
270 271 6.912951 TCTAAGCCTACTACAGTTTCAACT 57.087 37.500 0.00 0.00 40.60 3.16
271 272 6.921914 TCTAAGCCTACTACAGTTTCAACTC 58.078 40.000 0.00 0.00 37.08 3.01
272 273 5.810080 AAGCCTACTACAGTTTCAACTCT 57.190 39.130 0.00 0.00 37.08 3.24
273 274 5.394224 AGCCTACTACAGTTTCAACTCTC 57.606 43.478 0.00 0.00 37.08 3.20
274 275 5.081032 AGCCTACTACAGTTTCAACTCTCT 58.919 41.667 0.00 0.00 37.08 3.10
275 276 5.184287 AGCCTACTACAGTTTCAACTCTCTC 59.816 44.000 0.00 0.00 37.08 3.20
276 277 5.047943 GCCTACTACAGTTTCAACTCTCTCA 60.048 44.000 0.00 0.00 37.08 3.27
277 278 6.516860 GCCTACTACAGTTTCAACTCTCTCAA 60.517 42.308 0.00 0.00 37.08 3.02
278 279 6.864165 CCTACTACAGTTTCAACTCTCTCAAC 59.136 42.308 0.00 0.00 37.08 3.18
279 280 6.222038 ACTACAGTTTCAACTCTCTCAACA 57.778 37.500 0.00 0.00 37.08 3.33
280 281 6.043411 ACTACAGTTTCAACTCTCTCAACAC 58.957 40.000 0.00 0.00 37.08 3.32
281 282 4.832248 ACAGTTTCAACTCTCTCAACACA 58.168 39.130 0.00 0.00 37.08 3.72
282 283 4.631813 ACAGTTTCAACTCTCTCAACACAC 59.368 41.667 0.00 0.00 37.08 3.82
283 284 4.631377 CAGTTTCAACTCTCTCAACACACA 59.369 41.667 0.00 0.00 37.08 3.72
284 285 4.631813 AGTTTCAACTCTCTCAACACACAC 59.368 41.667 0.00 0.00 32.86 3.82
285 286 4.471904 TTCAACTCTCTCAACACACACT 57.528 40.909 0.00 0.00 0.00 3.55
286 287 4.046938 TCAACTCTCTCAACACACACTC 57.953 45.455 0.00 0.00 0.00 3.51
287 288 3.701542 TCAACTCTCTCAACACACACTCT 59.298 43.478 0.00 0.00 0.00 3.24
288 289 4.160439 TCAACTCTCTCAACACACACTCTT 59.840 41.667 0.00 0.00 0.00 2.85
289 290 4.744795 ACTCTCTCAACACACACTCTTT 57.255 40.909 0.00 0.00 0.00 2.52
290 291 5.091261 ACTCTCTCAACACACACTCTTTT 57.909 39.130 0.00 0.00 0.00 2.27
291 292 6.222038 ACTCTCTCAACACACACTCTTTTA 57.778 37.500 0.00 0.00 0.00 1.52
292 293 6.043411 ACTCTCTCAACACACACTCTTTTAC 58.957 40.000 0.00 0.00 0.00 2.01
293 294 5.972935 TCTCTCAACACACACTCTTTTACA 58.027 37.500 0.00 0.00 0.00 2.41
294 295 6.582636 TCTCTCAACACACACTCTTTTACAT 58.417 36.000 0.00 0.00 0.00 2.29
295 296 6.479990 TCTCTCAACACACACTCTTTTACATG 59.520 38.462 0.00 0.00 0.00 3.21
296 297 5.007626 TCTCAACACACACTCTTTTACATGC 59.992 40.000 0.00 0.00 0.00 4.06
297 298 4.036262 TCAACACACACTCTTTTACATGCC 59.964 41.667 0.00 0.00 0.00 4.40
298 299 3.550820 ACACACACTCTTTTACATGCCA 58.449 40.909 0.00 0.00 0.00 4.92
299 300 3.315191 ACACACACTCTTTTACATGCCAC 59.685 43.478 0.00 0.00 0.00 5.01
300 301 3.314913 CACACACTCTTTTACATGCCACA 59.685 43.478 0.00 0.00 0.00 4.17
301 302 3.315191 ACACACTCTTTTACATGCCACAC 59.685 43.478 0.00 0.00 0.00 3.82
302 303 3.565482 CACACTCTTTTACATGCCACACT 59.435 43.478 0.00 0.00 0.00 3.55
303 304 3.815401 ACACTCTTTTACATGCCACACTC 59.185 43.478 0.00 0.00 0.00 3.51
304 305 3.814842 CACTCTTTTACATGCCACACTCA 59.185 43.478 0.00 0.00 0.00 3.41
305 306 4.456911 CACTCTTTTACATGCCACACTCAT 59.543 41.667 0.00 0.00 0.00 2.90
306 307 5.643348 CACTCTTTTACATGCCACACTCATA 59.357 40.000 0.00 0.00 0.00 2.15
307 308 6.317140 CACTCTTTTACATGCCACACTCATAT 59.683 38.462 0.00 0.00 0.00 1.78
308 309 6.540189 ACTCTTTTACATGCCACACTCATATC 59.460 38.462 0.00 0.00 0.00 1.63
309 310 6.653020 TCTTTTACATGCCACACTCATATCT 58.347 36.000 0.00 0.00 0.00 1.98
310 311 7.791029 TCTTTTACATGCCACACTCATATCTA 58.209 34.615 0.00 0.00 0.00 1.98
311 312 8.264347 TCTTTTACATGCCACACTCATATCTAA 58.736 33.333 0.00 0.00 0.00 2.10
312 313 8.800370 TTTTACATGCCACACTCATATCTAAA 57.200 30.769 0.00 0.00 0.00 1.85
313 314 8.978874 TTTACATGCCACACTCATATCTAAAT 57.021 30.769 0.00 0.00 0.00 1.40
314 315 8.607441 TTACATGCCACACTCATATCTAAATC 57.393 34.615 0.00 0.00 0.00 2.17
315 316 6.594744 ACATGCCACACTCATATCTAAATCA 58.405 36.000 0.00 0.00 0.00 2.57
316 317 6.484643 ACATGCCACACTCATATCTAAATCAC 59.515 38.462 0.00 0.00 0.00 3.06
317 318 5.368145 TGCCACACTCATATCTAAATCACC 58.632 41.667 0.00 0.00 0.00 4.02
318 319 4.757149 GCCACACTCATATCTAAATCACCC 59.243 45.833 0.00 0.00 0.00 4.61
319 320 5.308825 CCACACTCATATCTAAATCACCCC 58.691 45.833 0.00 0.00 0.00 4.95
320 321 5.072329 CCACACTCATATCTAAATCACCCCT 59.928 44.000 0.00 0.00 0.00 4.79
321 322 6.270000 CCACACTCATATCTAAATCACCCCTA 59.730 42.308 0.00 0.00 0.00 3.53
322 323 7.202093 CCACACTCATATCTAAATCACCCCTAA 60.202 40.741 0.00 0.00 0.00 2.69
323 324 7.657761 CACACTCATATCTAAATCACCCCTAAC 59.342 40.741 0.00 0.00 0.00 2.34
324 325 7.162082 CACTCATATCTAAATCACCCCTAACC 58.838 42.308 0.00 0.00 0.00 2.85
325 326 7.016661 CACTCATATCTAAATCACCCCTAACCT 59.983 40.741 0.00 0.00 0.00 3.50
326 327 7.235812 ACTCATATCTAAATCACCCCTAACCTC 59.764 40.741 0.00 0.00 0.00 3.85
327 328 7.313731 TCATATCTAAATCACCCCTAACCTCT 58.686 38.462 0.00 0.00 0.00 3.69
328 329 8.461854 TCATATCTAAATCACCCCTAACCTCTA 58.538 37.037 0.00 0.00 0.00 2.43
329 330 9.273137 CATATCTAAATCACCCCTAACCTCTAT 57.727 37.037 0.00 0.00 0.00 1.98
330 331 6.996180 TCTAAATCACCCCTAACCTCTATG 57.004 41.667 0.00 0.00 0.00 2.23
331 332 4.439253 AAATCACCCCTAACCTCTATGC 57.561 45.455 0.00 0.00 0.00 3.14
332 333 2.868964 TCACCCCTAACCTCTATGCT 57.131 50.000 0.00 0.00 0.00 3.79
333 334 3.985553 TCACCCCTAACCTCTATGCTA 57.014 47.619 0.00 0.00 0.00 3.49
334 335 4.487282 TCACCCCTAACCTCTATGCTAT 57.513 45.455 0.00 0.00 0.00 2.97
335 336 4.417437 TCACCCCTAACCTCTATGCTATC 58.583 47.826 0.00 0.00 0.00 2.08
336 337 4.140782 TCACCCCTAACCTCTATGCTATCA 60.141 45.833 0.00 0.00 0.00 2.15
337 338 4.221703 CACCCCTAACCTCTATGCTATCAG 59.778 50.000 0.00 0.00 0.00 2.90
338 339 4.140663 ACCCCTAACCTCTATGCTATCAGT 60.141 45.833 0.00 0.00 0.00 3.41
339 340 5.076039 ACCCCTAACCTCTATGCTATCAGTA 59.924 44.000 0.00 0.00 0.00 2.74
340 341 5.419471 CCCCTAACCTCTATGCTATCAGTAC 59.581 48.000 0.00 0.00 0.00 2.73
341 342 6.249951 CCCTAACCTCTATGCTATCAGTACT 58.750 44.000 0.00 0.00 0.00 2.73
342 343 7.403671 CCCTAACCTCTATGCTATCAGTACTA 58.596 42.308 0.00 0.00 0.00 1.82
343 344 7.554835 CCCTAACCTCTATGCTATCAGTACTAG 59.445 44.444 0.00 0.00 0.00 2.57
344 345 8.322828 CCTAACCTCTATGCTATCAGTACTAGA 58.677 40.741 0.00 0.00 0.00 2.43
345 346 9.378551 CTAACCTCTATGCTATCAGTACTAGAG 57.621 40.741 0.00 1.44 34.56 2.43
347 348 6.717289 CCTCTATGCTATCAGTACTAGAGGT 58.283 44.000 19.56 0.00 43.66 3.85
348 349 6.597672 CCTCTATGCTATCAGTACTAGAGGTG 59.402 46.154 19.56 0.00 43.66 4.00
349 350 7.080653 TCTATGCTATCAGTACTAGAGGTGT 57.919 40.000 0.00 0.00 0.00 4.16
350 351 7.519057 TCTATGCTATCAGTACTAGAGGTGTT 58.481 38.462 0.00 0.00 0.00 3.32
351 352 6.642707 ATGCTATCAGTACTAGAGGTGTTC 57.357 41.667 0.00 0.00 0.00 3.18
352 353 5.506708 TGCTATCAGTACTAGAGGTGTTCA 58.493 41.667 0.00 0.00 0.00 3.18
353 354 6.129874 TGCTATCAGTACTAGAGGTGTTCAT 58.870 40.000 0.00 0.00 0.00 2.57
354 355 6.039829 TGCTATCAGTACTAGAGGTGTTCATG 59.960 42.308 0.00 0.00 0.00 3.07
355 356 4.720649 TCAGTACTAGAGGTGTTCATGC 57.279 45.455 0.00 0.00 0.00 4.06
356 357 4.344978 TCAGTACTAGAGGTGTTCATGCT 58.655 43.478 0.00 0.00 0.00 3.79
357 358 4.772624 TCAGTACTAGAGGTGTTCATGCTT 59.227 41.667 0.00 0.00 0.00 3.91
358 359 5.949952 TCAGTACTAGAGGTGTTCATGCTTA 59.050 40.000 0.00 0.00 0.00 3.09
359 360 6.607600 TCAGTACTAGAGGTGTTCATGCTTAT 59.392 38.462 0.00 0.00 0.00 1.73
360 361 6.699204 CAGTACTAGAGGTGTTCATGCTTATG 59.301 42.308 0.00 0.00 0.00 1.90
361 362 5.939764 ACTAGAGGTGTTCATGCTTATGA 57.060 39.130 0.00 0.00 0.00 2.15
362 363 6.491714 ACTAGAGGTGTTCATGCTTATGAT 57.508 37.500 0.00 0.00 0.00 2.45
363 364 7.603180 ACTAGAGGTGTTCATGCTTATGATA 57.397 36.000 0.00 0.00 0.00 2.15
364 365 8.023021 ACTAGAGGTGTTCATGCTTATGATAA 57.977 34.615 0.00 0.00 0.00 1.75
365 366 8.147058 ACTAGAGGTGTTCATGCTTATGATAAG 58.853 37.037 7.83 7.83 0.00 1.73
366 367 6.294473 AGAGGTGTTCATGCTTATGATAAGG 58.706 40.000 13.60 0.00 0.00 2.69
367 368 6.006275 AGGTGTTCATGCTTATGATAAGGT 57.994 37.500 13.60 0.00 0.00 3.50
368 369 6.058183 AGGTGTTCATGCTTATGATAAGGTC 58.942 40.000 13.60 0.00 0.00 3.85
369 370 6.058183 GGTGTTCATGCTTATGATAAGGTCT 58.942 40.000 13.60 0.00 0.00 3.85
370 371 6.543831 GGTGTTCATGCTTATGATAAGGTCTT 59.456 38.462 13.60 0.00 0.00 3.01
371 372 7.412853 GTGTTCATGCTTATGATAAGGTCTTG 58.587 38.462 13.60 6.80 0.00 3.02
372 373 6.543465 TGTTCATGCTTATGATAAGGTCTTGG 59.457 38.462 13.60 0.00 0.00 3.61
373 374 6.252599 TCATGCTTATGATAAGGTCTTGGT 57.747 37.500 13.60 0.00 0.00 3.67
374 375 6.291377 TCATGCTTATGATAAGGTCTTGGTC 58.709 40.000 13.60 0.00 0.00 4.02
375 376 5.692115 TGCTTATGATAAGGTCTTGGTCA 57.308 39.130 13.60 0.00 0.00 4.02
376 377 6.252599 TGCTTATGATAAGGTCTTGGTCAT 57.747 37.500 13.60 13.73 35.22 3.06
377 378 6.291377 TGCTTATGATAAGGTCTTGGTCATC 58.709 40.000 13.60 2.19 33.95 2.92
378 379 6.100279 TGCTTATGATAAGGTCTTGGTCATCT 59.900 38.462 13.60 0.95 33.95 2.90
379 380 6.995091 GCTTATGATAAGGTCTTGGTCATCTT 59.005 38.462 13.60 0.00 33.95 2.40
380 381 7.041508 GCTTATGATAAGGTCTTGGTCATCTTG 60.042 40.741 13.60 8.52 33.95 3.02
381 382 6.566079 ATGATAAGGTCTTGGTCATCTTGA 57.434 37.500 7.26 0.00 29.39 3.02
382 383 5.734720 TGATAAGGTCTTGGTCATCTTGAC 58.265 41.667 0.00 0.00 46.23 3.18
389 390 4.606071 GTCATCTTGACAGCGCCT 57.394 55.556 2.29 0.00 46.22 5.52
390 391 2.378028 GTCATCTTGACAGCGCCTC 58.622 57.895 2.29 0.00 46.22 4.70
391 392 0.108424 GTCATCTTGACAGCGCCTCT 60.108 55.000 2.29 0.00 46.22 3.69
392 393 0.610174 TCATCTTGACAGCGCCTCTT 59.390 50.000 2.29 0.00 0.00 2.85
393 394 0.725686 CATCTTGACAGCGCCTCTTG 59.274 55.000 2.29 0.00 0.00 3.02
394 395 1.023513 ATCTTGACAGCGCCTCTTGC 61.024 55.000 2.29 0.00 0.00 4.01
395 396 1.670406 CTTGACAGCGCCTCTTGCT 60.670 57.895 2.29 0.00 45.31 3.91
396 397 0.390340 CTTGACAGCGCCTCTTGCTA 60.390 55.000 2.29 0.00 41.72 3.49
397 398 0.670546 TTGACAGCGCCTCTTGCTAC 60.671 55.000 2.29 0.00 41.72 3.58
398 399 1.811679 GACAGCGCCTCTTGCTACC 60.812 63.158 2.29 0.00 41.72 3.18
399 400 2.512515 CAGCGCCTCTTGCTACCC 60.513 66.667 2.29 0.00 41.72 3.69
400 401 4.148825 AGCGCCTCTTGCTACCCG 62.149 66.667 2.29 0.00 41.87 5.28
404 405 3.771160 CCTCTTGCTACCCGCCGT 61.771 66.667 0.00 0.00 38.05 5.68
405 406 2.420568 CCTCTTGCTACCCGCCGTA 61.421 63.158 0.00 0.00 38.05 4.02
406 407 1.226888 CTCTTGCTACCCGCCGTAC 60.227 63.158 0.00 0.00 38.05 3.67
407 408 1.664321 CTCTTGCTACCCGCCGTACT 61.664 60.000 0.00 0.00 38.05 2.73
408 409 1.217244 CTTGCTACCCGCCGTACTT 59.783 57.895 0.00 0.00 38.05 2.24
409 410 0.390735 CTTGCTACCCGCCGTACTTT 60.391 55.000 0.00 0.00 38.05 2.66
410 411 0.390209 TTGCTACCCGCCGTACTTTC 60.390 55.000 0.00 0.00 38.05 2.62
411 412 1.216178 GCTACCCGCCGTACTTTCA 59.784 57.895 0.00 0.00 0.00 2.69
412 413 0.390209 GCTACCCGCCGTACTTTCAA 60.390 55.000 0.00 0.00 0.00 2.69
413 414 1.636988 CTACCCGCCGTACTTTCAAG 58.363 55.000 0.00 0.00 0.00 3.02
414 415 0.390209 TACCCGCCGTACTTTCAAGC 60.390 55.000 0.00 0.00 0.00 4.01
415 416 1.669760 CCCGCCGTACTTTCAAGCA 60.670 57.895 0.00 0.00 0.00 3.91
416 417 1.635663 CCCGCCGTACTTTCAAGCAG 61.636 60.000 0.00 0.00 0.00 4.24
417 418 1.635663 CCGCCGTACTTTCAAGCAGG 61.636 60.000 0.00 0.00 0.00 4.85
418 419 1.635663 CGCCGTACTTTCAAGCAGGG 61.636 60.000 0.00 0.00 31.90 4.45
419 420 1.923227 GCCGTACTTTCAAGCAGGGC 61.923 60.000 7.56 7.56 43.59 5.19
420 421 0.605319 CCGTACTTTCAAGCAGGGCA 60.605 55.000 0.00 0.00 0.00 5.36
421 422 0.798776 CGTACTTTCAAGCAGGGCAG 59.201 55.000 0.00 0.00 0.00 4.85
422 423 0.523519 GTACTTTCAAGCAGGGCAGC 59.476 55.000 0.00 0.00 0.00 5.25
423 424 0.110295 TACTTTCAAGCAGGGCAGCA 59.890 50.000 0.00 0.00 36.85 4.41
424 425 0.756442 ACTTTCAAGCAGGGCAGCAA 60.756 50.000 0.00 0.00 36.85 3.91
425 426 0.390124 CTTTCAAGCAGGGCAGCAAA 59.610 50.000 0.00 0.00 36.85 3.68
426 427 0.390124 TTTCAAGCAGGGCAGCAAAG 59.610 50.000 0.00 0.00 36.85 2.77
427 428 1.466025 TTCAAGCAGGGCAGCAAAGG 61.466 55.000 0.00 0.00 36.85 3.11
428 429 3.308705 AAGCAGGGCAGCAAAGGC 61.309 61.111 0.00 0.00 41.61 4.35
435 436 4.729856 GCAGCAAAGGCCGCCTTG 62.730 66.667 25.51 18.74 43.92 3.61
436 437 4.729856 CAGCAAAGGCCGCCTTGC 62.730 66.667 25.51 26.06 43.92 4.01
438 439 4.298069 GCAAAGGCCGCCTTGCAA 62.298 61.111 25.51 0.00 43.92 4.08
439 440 2.420890 CAAAGGCCGCCTTGCAAA 59.579 55.556 25.51 0.00 43.92 3.68
440 441 1.955663 CAAAGGCCGCCTTGCAAAC 60.956 57.895 25.51 0.00 43.92 2.93
441 442 3.163832 AAAGGCCGCCTTGCAAACC 62.164 57.895 25.51 0.00 43.92 3.27
444 445 3.694538 GCCGCCTTGCAAACCCAT 61.695 61.111 0.00 0.00 0.00 4.00
445 446 2.573340 CCGCCTTGCAAACCCATC 59.427 61.111 0.00 0.00 0.00 3.51
446 447 2.274645 CCGCCTTGCAAACCCATCA 61.275 57.895 0.00 0.00 0.00 3.07
447 448 1.664873 CGCCTTGCAAACCCATCAA 59.335 52.632 0.00 0.00 0.00 2.57
448 449 0.247185 CGCCTTGCAAACCCATCAAT 59.753 50.000 0.00 0.00 0.00 2.57
449 450 1.338011 CGCCTTGCAAACCCATCAATT 60.338 47.619 0.00 0.00 0.00 2.32
450 451 2.349590 GCCTTGCAAACCCATCAATTC 58.650 47.619 0.00 0.00 0.00 2.17
451 452 2.289569 GCCTTGCAAACCCATCAATTCA 60.290 45.455 0.00 0.00 0.00 2.57
452 453 3.620472 GCCTTGCAAACCCATCAATTCAT 60.620 43.478 0.00 0.00 0.00 2.57
453 454 3.936453 CCTTGCAAACCCATCAATTCATG 59.064 43.478 0.00 0.00 0.00 3.07
454 455 4.563993 CCTTGCAAACCCATCAATTCATGT 60.564 41.667 0.00 0.00 0.00 3.21
455 456 4.191033 TGCAAACCCATCAATTCATGTC 57.809 40.909 0.00 0.00 0.00 3.06
456 457 3.055963 TGCAAACCCATCAATTCATGTCC 60.056 43.478 0.00 0.00 0.00 4.02
457 458 3.196254 GCAAACCCATCAATTCATGTCCT 59.804 43.478 0.00 0.00 0.00 3.85
458 459 4.402155 GCAAACCCATCAATTCATGTCCTA 59.598 41.667 0.00 0.00 0.00 2.94
459 460 5.069516 GCAAACCCATCAATTCATGTCCTAT 59.930 40.000 0.00 0.00 0.00 2.57
460 461 6.509656 CAAACCCATCAATTCATGTCCTATG 58.490 40.000 0.00 0.00 0.00 2.23
461 462 4.147321 ACCCATCAATTCATGTCCTATGC 58.853 43.478 0.00 0.00 0.00 3.14
462 463 4.141088 ACCCATCAATTCATGTCCTATGCT 60.141 41.667 0.00 0.00 0.00 3.79
570 577 3.036429 GCCCACTTCCTCCATCGCT 62.036 63.158 0.00 0.00 0.00 4.93
577 594 3.057596 CACTTCCTCCATCGCTATCTCTC 60.058 52.174 0.00 0.00 0.00 3.20
584 601 3.153130 CCATCGCTATCTCTCTTCCTCA 58.847 50.000 0.00 0.00 0.00 3.86
586 603 4.142403 CCATCGCTATCTCTCTTCCTCATC 60.142 50.000 0.00 0.00 0.00 2.92
587 604 4.365514 TCGCTATCTCTCTTCCTCATCT 57.634 45.455 0.00 0.00 0.00 2.90
588 605 4.323417 TCGCTATCTCTCTTCCTCATCTC 58.677 47.826 0.00 0.00 0.00 2.75
589 606 4.071423 CGCTATCTCTCTTCCTCATCTCA 58.929 47.826 0.00 0.00 0.00 3.27
590 607 4.701651 CGCTATCTCTCTTCCTCATCTCAT 59.298 45.833 0.00 0.00 0.00 2.90
591 608 5.392272 CGCTATCTCTCTTCCTCATCTCATG 60.392 48.000 0.00 0.00 0.00 3.07
593 610 4.533001 TCTCTCTTCCTCATCTCATGGA 57.467 45.455 0.00 0.00 0.00 3.41
594 611 5.077369 TCTCTCTTCCTCATCTCATGGAT 57.923 43.478 0.00 0.00 34.51 3.41
617 637 2.105128 ATCTTCTTCCGAGCGCCG 59.895 61.111 2.29 7.65 38.18 6.46
714 734 2.185350 CCGCGACTGCATTCCTCT 59.815 61.111 8.23 0.00 42.97 3.69
761 782 1.079057 GCGAGAAGAGAACCCCCAC 60.079 63.158 0.00 0.00 0.00 4.61
793 817 1.701847 AGGAGAGTGGAAACTGCATGT 59.298 47.619 0.00 0.00 0.00 3.21
828 852 2.818432 AGCTTGGATTTCTGTGCTGAAG 59.182 45.455 0.00 0.00 0.00 3.02
835 859 1.865865 TTCTGTGCTGAAGGTTCGAC 58.134 50.000 0.00 0.00 0.00 4.20
836 860 0.033504 TCTGTGCTGAAGGTTCGACC 59.966 55.000 0.00 0.00 38.99 4.79
862 888 7.148918 CGTTGAGTAGAAAGCAAAATGATTTGG 60.149 37.037 0.00 0.00 44.93 3.28
966 1067 2.434185 TGTCTGACATTCGCCGCC 60.434 61.111 6.36 0.00 0.00 6.13
968 1069 4.812476 TCTGACATTCGCCGCCGG 62.812 66.667 0.00 0.00 34.56 6.13
1353 1463 2.683933 CGCCACCCTGACCTAGGT 60.684 66.667 16.26 16.26 45.80 3.08
1442 1552 2.303890 TGAAGTGCCTCTGTGACATGAT 59.696 45.455 0.00 0.00 0.00 2.45
1609 1723 0.043334 AGCTGACCACTACCCTGGAT 59.957 55.000 0.00 0.00 35.04 3.41
1897 2014 4.891168 AGGTCGTTAGGTTGTTGGAAAAAT 59.109 37.500 0.00 0.00 0.00 1.82
1970 2087 3.230134 ACTACCTTTGCAAGCATGGAAA 58.770 40.909 17.46 8.34 43.51 3.13
2034 2151 7.690256 AGAAGGGCCATAAACCTAATATAGTG 58.310 38.462 6.18 0.00 35.64 2.74
2037 2154 6.561070 AGGGCCATAAACCTAATATAGTGTCA 59.439 38.462 6.18 0.00 34.71 3.58
2038 2155 7.239773 AGGGCCATAAACCTAATATAGTGTCAT 59.760 37.037 6.18 0.00 34.71 3.06
2145 2264 5.423704 TTGTACCCGATCTCCATTGTTTA 57.576 39.130 0.00 0.00 0.00 2.01
2190 2309 5.104569 TGCTAAGTGTGGAATGATGGATGTA 60.105 40.000 0.00 0.00 0.00 2.29
2408 4136 4.405358 TGGTGATTTCTTGAAAGCAAAGGT 59.595 37.500 14.35 0.00 32.73 3.50
2414 4142 7.867403 TGATTTCTTGAAAGCAAAGGTATTGAC 59.133 33.333 10.98 0.00 32.73 3.18
2473 4202 4.990426 CACGGAAAAGCCAAAGAATTGATT 59.010 37.500 0.00 0.00 38.94 2.57
2592 4494 2.634815 ATTGGTCATAGGCTGCAGAG 57.365 50.000 20.43 0.82 0.00 3.35
2692 4595 9.975218 ATTTACTTCAGTTACCAGTGGATATTT 57.025 29.630 18.40 0.00 0.00 1.40
2694 4597 6.415573 ACTTCAGTTACCAGTGGATATTTCC 58.584 40.000 18.40 0.00 42.94 3.13
2794 4698 1.598130 ACTTCTCGGTGGCTGTTGC 60.598 57.895 0.00 0.00 38.76 4.17
2814 4718 4.175516 TGCAAAAATGGAAGAATCGATGC 58.824 39.130 0.00 0.00 0.00 3.91
2822 4726 1.745087 GAAGAATCGATGCTGGGCAAA 59.255 47.619 6.69 0.00 43.62 3.68
2830 4734 2.414559 CGATGCTGGGCAAAAGTGTTAG 60.415 50.000 0.00 0.00 43.62 2.34
2839 4744 4.010349 GGCAAAAGTGTTAGCCTGTATCT 58.990 43.478 0.00 0.00 43.70 1.98
2970 4876 6.524586 GCACATTGACTTGATAGTTAAACTGC 59.475 38.462 0.00 0.00 34.09 4.40
2973 4879 7.661437 ACATTGACTTGATAGTTAAACTGCTGA 59.339 33.333 0.00 0.00 34.09 4.26
2974 4880 8.671921 CATTGACTTGATAGTTAAACTGCTGAT 58.328 33.333 0.00 0.00 34.09 2.90
3019 5009 4.572985 TTCAGATTGGTGCTTCAGTTTG 57.427 40.909 0.00 0.00 0.00 2.93
3020 5010 3.554934 TCAGATTGGTGCTTCAGTTTGT 58.445 40.909 0.00 0.00 0.00 2.83
3104 5095 5.545588 TGTTGCCTGATTAGATAGCTGATC 58.454 41.667 5.84 5.84 37.58 2.92
3140 5132 8.304596 TGAAAATATAATGGTGTTTTTGGCGTA 58.695 29.630 0.00 0.00 0.00 4.42
3146 5138 3.657634 TGGTGTTTTTGGCGTATACGTA 58.342 40.909 25.04 12.87 42.22 3.57
3202 5194 8.084073 CCAGATTAGCTTGACAAAATGAAAAGA 58.916 33.333 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.256879 CCAAGAGCTTGTCTGTCTCACTA 59.743 47.826 9.18 0.00 38.85 2.74
2 3 2.036475 TCCAAGAGCTTGTCTGTCTCAC 59.964 50.000 9.18 0.00 38.85 3.51
3 4 2.036475 GTCCAAGAGCTTGTCTGTCTCA 59.964 50.000 9.18 0.00 38.85 3.27
4 5 2.298729 AGTCCAAGAGCTTGTCTGTCTC 59.701 50.000 9.18 0.00 38.85 3.36
5 6 2.036992 CAGTCCAAGAGCTTGTCTGTCT 59.963 50.000 16.90 3.34 38.85 3.41
6 7 2.224161 ACAGTCCAAGAGCTTGTCTGTC 60.224 50.000 21.28 4.39 43.29 3.51
7 8 1.765314 ACAGTCCAAGAGCTTGTCTGT 59.235 47.619 21.28 21.28 42.70 3.41
9 10 1.346068 GGACAGTCCAAGAGCTTGTCT 59.654 52.381 15.43 4.85 38.85 3.41
11 12 0.034059 CGGACAGTCCAAGAGCTTGT 59.966 55.000 20.13 0.00 38.85 3.16
13 14 0.605589 CTCGGACAGTCCAAGAGCTT 59.394 55.000 20.13 0.00 35.91 3.74
14 15 1.254284 CCTCGGACAGTCCAAGAGCT 61.254 60.000 20.13 0.00 35.91 4.09
15 16 1.216710 CCTCGGACAGTCCAAGAGC 59.783 63.158 20.13 0.00 35.91 4.09
16 17 1.893786 CCCTCGGACAGTCCAAGAG 59.106 63.158 20.13 17.04 35.91 2.85
17 18 2.283529 GCCCTCGGACAGTCCAAGA 61.284 63.158 20.13 8.58 35.91 3.02
18 19 2.266055 GCCCTCGGACAGTCCAAG 59.734 66.667 20.13 10.71 35.91 3.61
19 20 3.691342 CGCCCTCGGACAGTCCAA 61.691 66.667 20.13 0.00 35.91 3.53
20 21 4.671590 TCGCCCTCGGACAGTCCA 62.672 66.667 20.13 6.03 35.91 4.02
21 22 4.131088 GTCGCCCTCGGACAGTCC 62.131 72.222 9.92 9.92 36.13 3.85
22 23 4.131088 GGTCGCCCTCGGACAGTC 62.131 72.222 0.00 0.00 36.13 3.51
26 27 4.754667 GTTGGGTCGCCCTCGGAC 62.755 72.222 14.76 6.17 45.70 4.79
33 34 4.754667 GTCGAGGGTTGGGTCGCC 62.755 72.222 0.00 0.00 36.11 5.54
34 35 3.934391 CTGTCGAGGGTTGGGTCGC 62.934 68.421 0.00 0.00 36.11 5.19
35 36 2.095978 AACTGTCGAGGGTTGGGTCG 62.096 60.000 2.66 0.00 37.54 4.79
36 37 0.320508 GAACTGTCGAGGGTTGGGTC 60.321 60.000 7.54 0.00 0.00 4.46
37 38 1.752833 GAACTGTCGAGGGTTGGGT 59.247 57.895 7.54 0.00 0.00 4.51
38 39 1.003718 GGAACTGTCGAGGGTTGGG 60.004 63.158 7.54 0.00 0.00 4.12
39 40 0.107831 TTGGAACTGTCGAGGGTTGG 59.892 55.000 7.54 0.00 0.00 3.77
40 41 1.226746 GTTGGAACTGTCGAGGGTTG 58.773 55.000 7.54 0.00 0.00 3.77
41 42 0.834612 TGTTGGAACTGTCGAGGGTT 59.165 50.000 3.05 3.05 0.00 4.11
42 43 1.056660 ATGTTGGAACTGTCGAGGGT 58.943 50.000 0.00 0.00 0.00 4.34
43 44 3.118775 TGATATGTTGGAACTGTCGAGGG 60.119 47.826 0.00 0.00 0.00 4.30
44 45 4.123497 TGATATGTTGGAACTGTCGAGG 57.877 45.455 0.00 0.00 0.00 4.63
45 46 6.668541 AAATGATATGTTGGAACTGTCGAG 57.331 37.500 0.00 0.00 0.00 4.04
46 47 6.652900 TGAAAATGATATGTTGGAACTGTCGA 59.347 34.615 0.00 0.00 0.00 4.20
47 48 6.841119 TGAAAATGATATGTTGGAACTGTCG 58.159 36.000 0.00 0.00 0.00 4.35
48 49 7.703621 CCATGAAAATGATATGTTGGAACTGTC 59.296 37.037 0.00 0.00 0.00 3.51
49 50 7.549839 CCATGAAAATGATATGTTGGAACTGT 58.450 34.615 0.00 0.00 0.00 3.55
50 51 6.477688 GCCATGAAAATGATATGTTGGAACTG 59.522 38.462 0.00 0.00 0.00 3.16
51 52 6.381994 AGCCATGAAAATGATATGTTGGAACT 59.618 34.615 0.00 0.00 0.00 3.01
52 53 6.576185 AGCCATGAAAATGATATGTTGGAAC 58.424 36.000 0.00 0.00 0.00 3.62
53 54 6.183360 GGAGCCATGAAAATGATATGTTGGAA 60.183 38.462 0.00 0.00 0.00 3.53
54 55 5.302568 GGAGCCATGAAAATGATATGTTGGA 59.697 40.000 0.00 0.00 0.00 3.53
55 56 5.303589 AGGAGCCATGAAAATGATATGTTGG 59.696 40.000 0.00 0.00 0.00 3.77
56 57 6.040054 TCAGGAGCCATGAAAATGATATGTTG 59.960 38.462 0.00 0.00 0.00 3.33
57 58 6.040166 GTCAGGAGCCATGAAAATGATATGTT 59.960 38.462 0.00 0.00 0.00 2.71
58 59 5.533903 GTCAGGAGCCATGAAAATGATATGT 59.466 40.000 0.00 0.00 0.00 2.29
59 60 5.334646 CGTCAGGAGCCATGAAAATGATATG 60.335 44.000 0.00 0.00 0.00 1.78
60 61 4.758674 CGTCAGGAGCCATGAAAATGATAT 59.241 41.667 0.00 0.00 0.00 1.63
61 62 4.129380 CGTCAGGAGCCATGAAAATGATA 58.871 43.478 0.00 0.00 0.00 2.15
62 63 2.947652 CGTCAGGAGCCATGAAAATGAT 59.052 45.455 0.00 0.00 0.00 2.45
63 64 2.358957 CGTCAGGAGCCATGAAAATGA 58.641 47.619 0.00 0.00 0.00 2.57
64 65 1.402968 CCGTCAGGAGCCATGAAAATG 59.597 52.381 0.00 0.00 41.02 2.32
65 66 1.683011 CCCGTCAGGAGCCATGAAAAT 60.683 52.381 0.00 0.00 41.02 1.82
66 67 0.322456 CCCGTCAGGAGCCATGAAAA 60.322 55.000 0.00 0.00 41.02 2.29
67 68 1.299648 CCCGTCAGGAGCCATGAAA 59.700 57.895 0.00 0.00 41.02 2.69
68 69 2.989639 CCCGTCAGGAGCCATGAA 59.010 61.111 0.00 0.00 41.02 2.57
69 70 3.785859 GCCCGTCAGGAGCCATGA 61.786 66.667 0.00 0.00 41.02 3.07
101 102 2.738521 CTGCCGGTCAACTGACGG 60.739 66.667 1.90 9.74 45.65 4.79
102 103 3.414700 GCTGCCGGTCAACTGACG 61.415 66.667 1.90 0.29 45.65 4.35
103 104 3.050275 GGCTGCCGGTCAACTGAC 61.050 66.667 1.35 0.98 44.04 3.51
104 105 4.329545 GGGCTGCCGGTCAACTGA 62.330 66.667 13.40 0.00 0.00 3.41
120 121 4.176752 GAAGCTACCGGCCCTGGG 62.177 72.222 8.86 8.86 43.05 4.45
121 122 4.176752 GGAAGCTACCGGCCCTGG 62.177 72.222 0.00 0.00 43.05 4.45
122 123 2.670148 AAGGAAGCTACCGGCCCTG 61.670 63.158 0.00 0.00 43.05 4.45
123 124 2.285442 AAGGAAGCTACCGGCCCT 60.285 61.111 0.00 0.00 43.05 5.19
124 125 2.124695 CAAGGAAGCTACCGGCCC 60.125 66.667 0.00 0.00 43.05 5.80
125 126 2.124695 CCAAGGAAGCTACCGGCC 60.125 66.667 0.00 0.00 43.05 6.13
126 127 2.824489 GCCAAGGAAGCTACCGGC 60.824 66.667 0.00 0.00 42.19 6.13
127 128 1.450312 CTGCCAAGGAAGCTACCGG 60.450 63.158 0.00 0.00 34.73 5.28
128 129 1.021390 CACTGCCAAGGAAGCTACCG 61.021 60.000 0.00 0.00 34.73 4.02
129 130 0.036875 ACACTGCCAAGGAAGCTACC 59.963 55.000 0.00 0.00 0.00 3.18
130 131 1.443802 GACACTGCCAAGGAAGCTAC 58.556 55.000 0.00 0.00 0.00 3.58
131 132 0.324943 GGACACTGCCAAGGAAGCTA 59.675 55.000 0.00 0.00 0.00 3.32
132 133 1.073897 GGACACTGCCAAGGAAGCT 59.926 57.895 0.00 0.00 0.00 3.74
133 134 0.957888 GAGGACACTGCCAAGGAAGC 60.958 60.000 0.00 0.00 0.00 3.86
134 135 0.397941 TGAGGACACTGCCAAGGAAG 59.602 55.000 0.00 0.00 0.00 3.46
135 136 0.843309 TTGAGGACACTGCCAAGGAA 59.157 50.000 0.00 0.00 0.00 3.36
136 137 0.108585 GTTGAGGACACTGCCAAGGA 59.891 55.000 0.00 0.00 0.00 3.36
137 138 0.179020 TGTTGAGGACACTGCCAAGG 60.179 55.000 0.00 0.00 32.00 3.61
138 139 1.808945 GATGTTGAGGACACTGCCAAG 59.191 52.381 0.00 0.00 42.04 3.61
139 140 1.421268 AGATGTTGAGGACACTGCCAA 59.579 47.619 0.00 0.00 42.04 4.52
140 141 1.002430 GAGATGTTGAGGACACTGCCA 59.998 52.381 0.00 0.00 42.04 4.92
141 142 1.277557 AGAGATGTTGAGGACACTGCC 59.722 52.381 0.00 0.00 42.04 4.85
142 143 2.233431 AGAGAGATGTTGAGGACACTGC 59.767 50.000 0.00 0.00 42.04 4.40
143 144 3.119173 GGAGAGAGATGTTGAGGACACTG 60.119 52.174 0.00 0.00 42.04 3.66
144 145 3.096092 GGAGAGAGATGTTGAGGACACT 58.904 50.000 0.00 0.00 42.04 3.55
145 146 3.096092 AGGAGAGAGATGTTGAGGACAC 58.904 50.000 0.00 0.00 42.04 3.67
146 147 3.360867 GAGGAGAGAGATGTTGAGGACA 58.639 50.000 0.00 0.00 43.71 4.02
147 148 2.693074 GGAGGAGAGAGATGTTGAGGAC 59.307 54.545 0.00 0.00 0.00 3.85
148 149 2.358721 GGGAGGAGAGAGATGTTGAGGA 60.359 54.545 0.00 0.00 0.00 3.71
149 150 2.038659 GGGAGGAGAGAGATGTTGAGG 58.961 57.143 0.00 0.00 0.00 3.86
150 151 2.038659 GGGGAGGAGAGAGATGTTGAG 58.961 57.143 0.00 0.00 0.00 3.02
151 152 1.648568 AGGGGAGGAGAGAGATGTTGA 59.351 52.381 0.00 0.00 0.00 3.18
152 153 2.173126 AGGGGAGGAGAGAGATGTTG 57.827 55.000 0.00 0.00 0.00 3.33
153 154 2.587777 TGTAGGGGAGGAGAGAGATGTT 59.412 50.000 0.00 0.00 0.00 2.71
154 155 2.176798 CTGTAGGGGAGGAGAGAGATGT 59.823 54.545 0.00 0.00 0.00 3.06
155 156 2.445145 TCTGTAGGGGAGGAGAGAGATG 59.555 54.545 0.00 0.00 0.00 2.90
156 157 2.795556 TCTGTAGGGGAGGAGAGAGAT 58.204 52.381 0.00 0.00 0.00 2.75
157 158 2.288598 TCTGTAGGGGAGGAGAGAGA 57.711 55.000 0.00 0.00 0.00 3.10
158 159 3.140144 AGAATCTGTAGGGGAGGAGAGAG 59.860 52.174 0.00 0.00 0.00 3.20
159 160 3.135279 AGAATCTGTAGGGGAGGAGAGA 58.865 50.000 0.00 0.00 0.00 3.10
160 161 3.496331 GAGAATCTGTAGGGGAGGAGAG 58.504 54.545 0.00 0.00 0.00 3.20
161 162 3.603965 GAGAATCTGTAGGGGAGGAGA 57.396 52.381 0.00 0.00 0.00 3.71
175 176 4.100344 GGTTGAGGGTAGAAGGAGAGAATC 59.900 50.000 0.00 0.00 0.00 2.52
176 177 4.034410 GGTTGAGGGTAGAAGGAGAGAAT 58.966 47.826 0.00 0.00 0.00 2.40
177 178 3.181410 TGGTTGAGGGTAGAAGGAGAGAA 60.181 47.826 0.00 0.00 0.00 2.87
178 179 2.382305 TGGTTGAGGGTAGAAGGAGAGA 59.618 50.000 0.00 0.00 0.00 3.10
179 180 2.498078 GTGGTTGAGGGTAGAAGGAGAG 59.502 54.545 0.00 0.00 0.00 3.20
180 181 2.537143 GTGGTTGAGGGTAGAAGGAGA 58.463 52.381 0.00 0.00 0.00 3.71
181 182 1.555533 GGTGGTTGAGGGTAGAAGGAG 59.444 57.143 0.00 0.00 0.00 3.69
182 183 1.151413 AGGTGGTTGAGGGTAGAAGGA 59.849 52.381 0.00 0.00 0.00 3.36
183 184 1.555533 GAGGTGGTTGAGGGTAGAAGG 59.444 57.143 0.00 0.00 0.00 3.46
184 185 1.555533 GGAGGTGGTTGAGGGTAGAAG 59.444 57.143 0.00 0.00 0.00 2.85
185 186 1.151413 AGGAGGTGGTTGAGGGTAGAA 59.849 52.381 0.00 0.00 0.00 2.10
186 187 0.790993 AGGAGGTGGTTGAGGGTAGA 59.209 55.000 0.00 0.00 0.00 2.59
187 188 1.196012 GAGGAGGTGGTTGAGGGTAG 58.804 60.000 0.00 0.00 0.00 3.18
188 189 0.490017 TGAGGAGGTGGTTGAGGGTA 59.510 55.000 0.00 0.00 0.00 3.69
189 190 1.128188 GTGAGGAGGTGGTTGAGGGT 61.128 60.000 0.00 0.00 0.00 4.34
190 191 1.679898 GTGAGGAGGTGGTTGAGGG 59.320 63.158 0.00 0.00 0.00 4.30
191 192 1.127567 TGGTGAGGAGGTGGTTGAGG 61.128 60.000 0.00 0.00 0.00 3.86
192 193 0.035458 GTGGTGAGGAGGTGGTTGAG 59.965 60.000 0.00 0.00 0.00 3.02
193 194 1.415672 GGTGGTGAGGAGGTGGTTGA 61.416 60.000 0.00 0.00 0.00 3.18
194 195 1.073199 GGTGGTGAGGAGGTGGTTG 59.927 63.158 0.00 0.00 0.00 3.77
195 196 0.772124 ATGGTGGTGAGGAGGTGGTT 60.772 55.000 0.00 0.00 0.00 3.67
196 197 1.151810 ATGGTGGTGAGGAGGTGGT 60.152 57.895 0.00 0.00 0.00 4.16
197 198 0.911525 AGATGGTGGTGAGGAGGTGG 60.912 60.000 0.00 0.00 0.00 4.61
198 199 1.482593 GTAGATGGTGGTGAGGAGGTG 59.517 57.143 0.00 0.00 0.00 4.00
199 200 1.362932 AGTAGATGGTGGTGAGGAGGT 59.637 52.381 0.00 0.00 0.00 3.85
200 201 2.166907 AGTAGATGGTGGTGAGGAGG 57.833 55.000 0.00 0.00 0.00 4.30
201 202 2.432510 GGAAGTAGATGGTGGTGAGGAG 59.567 54.545 0.00 0.00 0.00 3.69
202 203 2.044492 AGGAAGTAGATGGTGGTGAGGA 59.956 50.000 0.00 0.00 0.00 3.71
203 204 2.432510 GAGGAAGTAGATGGTGGTGAGG 59.567 54.545 0.00 0.00 0.00 3.86
204 205 3.131933 CAGAGGAAGTAGATGGTGGTGAG 59.868 52.174 0.00 0.00 0.00 3.51
205 206 3.099905 CAGAGGAAGTAGATGGTGGTGA 58.900 50.000 0.00 0.00 0.00 4.02
206 207 2.834549 ACAGAGGAAGTAGATGGTGGTG 59.165 50.000 0.00 0.00 0.00 4.17
207 208 3.191888 ACAGAGGAAGTAGATGGTGGT 57.808 47.619 0.00 0.00 0.00 4.16
208 209 4.466370 TGTAACAGAGGAAGTAGATGGTGG 59.534 45.833 0.00 0.00 0.00 4.61
209 210 5.661056 TGTAACAGAGGAAGTAGATGGTG 57.339 43.478 0.00 0.00 0.00 4.17
210 211 5.395768 GCATGTAACAGAGGAAGTAGATGGT 60.396 44.000 0.00 0.00 0.00 3.55
211 212 5.053145 GCATGTAACAGAGGAAGTAGATGG 58.947 45.833 0.00 0.00 0.00 3.51
212 213 5.521735 GTGCATGTAACAGAGGAAGTAGATG 59.478 44.000 0.00 0.00 0.00 2.90
213 214 5.187772 TGTGCATGTAACAGAGGAAGTAGAT 59.812 40.000 0.00 0.00 0.00 1.98
214 215 4.526650 TGTGCATGTAACAGAGGAAGTAGA 59.473 41.667 0.00 0.00 0.00 2.59
215 216 4.820897 TGTGCATGTAACAGAGGAAGTAG 58.179 43.478 0.00 0.00 0.00 2.57
216 217 4.283467 ACTGTGCATGTAACAGAGGAAGTA 59.717 41.667 27.24 0.00 46.55 2.24
217 218 3.071602 ACTGTGCATGTAACAGAGGAAGT 59.928 43.478 27.24 10.01 46.55 3.01
218 219 3.668447 ACTGTGCATGTAACAGAGGAAG 58.332 45.455 27.24 9.52 46.55 3.46
219 220 3.769739 ACTGTGCATGTAACAGAGGAA 57.230 42.857 27.24 0.00 46.55 3.36
220 221 4.082190 GTCTACTGTGCATGTAACAGAGGA 60.082 45.833 27.24 21.43 46.55 3.71
221 222 4.177026 GTCTACTGTGCATGTAACAGAGG 58.823 47.826 27.24 20.15 46.55 3.69
222 223 4.177026 GGTCTACTGTGCATGTAACAGAG 58.823 47.826 27.24 20.75 46.55 3.35
223 224 3.056107 GGGTCTACTGTGCATGTAACAGA 60.056 47.826 27.24 15.11 46.55 3.41
224 225 9.245281 TAGATGGGTCTACTGTGCATGTAACAG 62.245 44.444 21.90 21.90 41.87 3.16
225 226 2.635427 TGGGTCTACTGTGCATGTAACA 59.365 45.455 0.00 0.00 0.00 2.41
226 227 3.328382 TGGGTCTACTGTGCATGTAAC 57.672 47.619 0.00 0.00 0.00 2.50
227 228 3.774766 AGATGGGTCTACTGTGCATGTAA 59.225 43.478 0.00 0.00 31.36 2.41
228 229 3.374764 AGATGGGTCTACTGTGCATGTA 58.625 45.455 0.00 0.00 31.36 2.29
229 230 2.191400 AGATGGGTCTACTGTGCATGT 58.809 47.619 0.00 0.00 31.36 3.21
230 231 2.996249 AGATGGGTCTACTGTGCATG 57.004 50.000 0.00 0.00 31.36 4.06
231 232 3.181461 GCTTAGATGGGTCTACTGTGCAT 60.181 47.826 0.00 0.00 36.69 3.96
232 233 2.168521 GCTTAGATGGGTCTACTGTGCA 59.831 50.000 0.00 0.00 36.69 4.57
233 234 2.483889 GGCTTAGATGGGTCTACTGTGC 60.484 54.545 0.00 0.00 36.69 4.57
234 235 3.034635 AGGCTTAGATGGGTCTACTGTG 58.965 50.000 0.00 0.00 36.69 3.66
235 236 3.406512 AGGCTTAGATGGGTCTACTGT 57.593 47.619 0.00 0.00 36.69 3.55
236 237 4.475345 AGTAGGCTTAGATGGGTCTACTG 58.525 47.826 6.46 0.00 45.52 2.74
237 238 4.817874 AGTAGGCTTAGATGGGTCTACT 57.182 45.455 0.00 2.00 43.44 2.57
238 239 5.383476 TGTAGTAGGCTTAGATGGGTCTAC 58.617 45.833 0.00 0.00 39.92 2.59
239 240 5.133999 ACTGTAGTAGGCTTAGATGGGTCTA 59.866 44.000 0.00 0.00 35.87 2.59
240 241 4.079096 ACTGTAGTAGGCTTAGATGGGTCT 60.079 45.833 0.00 0.00 38.52 3.85
241 242 4.216708 ACTGTAGTAGGCTTAGATGGGTC 58.783 47.826 0.00 0.00 0.00 4.46
242 243 4.267341 ACTGTAGTAGGCTTAGATGGGT 57.733 45.455 0.00 0.00 0.00 4.51
243 244 5.128827 TGAAACTGTAGTAGGCTTAGATGGG 59.871 44.000 0.00 0.00 0.00 4.00
244 245 6.222038 TGAAACTGTAGTAGGCTTAGATGG 57.778 41.667 0.00 0.00 0.00 3.51
245 246 7.324178 AGTTGAAACTGTAGTAGGCTTAGATG 58.676 38.462 0.00 0.00 37.98 2.90
246 247 7.397761 AGAGTTGAAACTGTAGTAGGCTTAGAT 59.602 37.037 0.00 0.00 39.88 1.98
247 248 6.720288 AGAGTTGAAACTGTAGTAGGCTTAGA 59.280 38.462 0.00 0.00 39.88 2.10
248 249 6.926313 AGAGTTGAAACTGTAGTAGGCTTAG 58.074 40.000 0.00 0.00 39.88 2.18
249 250 6.720288 AGAGAGTTGAAACTGTAGTAGGCTTA 59.280 38.462 0.00 0.00 39.88 3.09
250 251 5.540719 AGAGAGTTGAAACTGTAGTAGGCTT 59.459 40.000 0.00 0.00 39.88 4.35
251 252 5.081032 AGAGAGTTGAAACTGTAGTAGGCT 58.919 41.667 0.00 0.00 39.88 4.58
252 253 5.047943 TGAGAGAGTTGAAACTGTAGTAGGC 60.048 44.000 0.00 0.00 39.88 3.93
253 254 6.576662 TGAGAGAGTTGAAACTGTAGTAGG 57.423 41.667 0.00 0.00 39.88 3.18
254 255 7.380065 GTGTTGAGAGAGTTGAAACTGTAGTAG 59.620 40.741 0.00 0.00 39.88 2.57
255 256 7.147966 TGTGTTGAGAGAGTTGAAACTGTAGTA 60.148 37.037 0.00 0.00 39.88 1.82
256 257 6.043411 GTGTTGAGAGAGTTGAAACTGTAGT 58.957 40.000 0.00 0.00 39.88 2.73
257 258 6.019479 GTGTGTTGAGAGAGTTGAAACTGTAG 60.019 42.308 0.00 0.00 39.88 2.74
258 259 5.810587 GTGTGTTGAGAGAGTTGAAACTGTA 59.189 40.000 0.00 0.00 39.88 2.74
259 260 4.631813 GTGTGTTGAGAGAGTTGAAACTGT 59.368 41.667 0.00 0.00 39.88 3.55
260 261 4.631377 TGTGTGTTGAGAGAGTTGAAACTG 59.369 41.667 0.00 0.00 39.88 3.16
261 262 4.631813 GTGTGTGTTGAGAGAGTTGAAACT 59.368 41.667 0.00 0.00 43.16 2.66
262 263 4.631813 AGTGTGTGTTGAGAGAGTTGAAAC 59.368 41.667 0.00 0.00 0.00 2.78
263 264 4.832248 AGTGTGTGTTGAGAGAGTTGAAA 58.168 39.130 0.00 0.00 0.00 2.69
264 265 4.160439 AGAGTGTGTGTTGAGAGAGTTGAA 59.840 41.667 0.00 0.00 0.00 2.69
265 266 3.701542 AGAGTGTGTGTTGAGAGAGTTGA 59.298 43.478 0.00 0.00 0.00 3.18
266 267 4.052159 AGAGTGTGTGTTGAGAGAGTTG 57.948 45.455 0.00 0.00 0.00 3.16
267 268 4.744795 AAGAGTGTGTGTTGAGAGAGTT 57.255 40.909 0.00 0.00 0.00 3.01
268 269 4.744795 AAAGAGTGTGTGTTGAGAGAGT 57.255 40.909 0.00 0.00 0.00 3.24
269 270 6.042777 TGTAAAAGAGTGTGTGTTGAGAGAG 58.957 40.000 0.00 0.00 0.00 3.20
270 271 5.972935 TGTAAAAGAGTGTGTGTTGAGAGA 58.027 37.500 0.00 0.00 0.00 3.10
271 272 6.653183 CATGTAAAAGAGTGTGTGTTGAGAG 58.347 40.000 0.00 0.00 0.00 3.20
272 273 5.007626 GCATGTAAAAGAGTGTGTGTTGAGA 59.992 40.000 0.00 0.00 0.00 3.27
273 274 5.207768 GCATGTAAAAGAGTGTGTGTTGAG 58.792 41.667 0.00 0.00 0.00 3.02
274 275 4.036262 GGCATGTAAAAGAGTGTGTGTTGA 59.964 41.667 0.00 0.00 0.00 3.18
275 276 4.202000 TGGCATGTAAAAGAGTGTGTGTTG 60.202 41.667 0.00 0.00 0.00 3.33
276 277 3.951037 TGGCATGTAAAAGAGTGTGTGTT 59.049 39.130 0.00 0.00 0.00 3.32
277 278 3.315191 GTGGCATGTAAAAGAGTGTGTGT 59.685 43.478 0.00 0.00 0.00 3.72
278 279 3.314913 TGTGGCATGTAAAAGAGTGTGTG 59.685 43.478 0.00 0.00 0.00 3.82
279 280 3.315191 GTGTGGCATGTAAAAGAGTGTGT 59.685 43.478 0.00 0.00 0.00 3.72
280 281 3.565482 AGTGTGGCATGTAAAAGAGTGTG 59.435 43.478 0.00 0.00 0.00 3.82
281 282 3.815401 GAGTGTGGCATGTAAAAGAGTGT 59.185 43.478 0.00 0.00 0.00 3.55
282 283 3.814842 TGAGTGTGGCATGTAAAAGAGTG 59.185 43.478 0.00 0.00 0.00 3.51
283 284 4.085357 TGAGTGTGGCATGTAAAAGAGT 57.915 40.909 0.00 0.00 0.00 3.24
284 285 6.765036 AGATATGAGTGTGGCATGTAAAAGAG 59.235 38.462 0.00 0.00 0.00 2.85
285 286 6.653020 AGATATGAGTGTGGCATGTAAAAGA 58.347 36.000 0.00 0.00 0.00 2.52
286 287 6.932356 AGATATGAGTGTGGCATGTAAAAG 57.068 37.500 0.00 0.00 0.00 2.27
287 288 8.800370 TTTAGATATGAGTGTGGCATGTAAAA 57.200 30.769 0.00 0.00 0.00 1.52
288 289 8.978874 ATTTAGATATGAGTGTGGCATGTAAA 57.021 30.769 0.00 0.00 0.00 2.01
289 290 8.210265 TGATTTAGATATGAGTGTGGCATGTAA 58.790 33.333 0.00 0.00 0.00 2.41
290 291 7.657354 GTGATTTAGATATGAGTGTGGCATGTA 59.343 37.037 0.00 0.00 0.00 2.29
291 292 6.484643 GTGATTTAGATATGAGTGTGGCATGT 59.515 38.462 0.00 0.00 0.00 3.21
292 293 6.072838 GGTGATTTAGATATGAGTGTGGCATG 60.073 42.308 0.00 0.00 0.00 4.06
293 294 6.000219 GGTGATTTAGATATGAGTGTGGCAT 59.000 40.000 0.00 0.00 0.00 4.40
294 295 5.368145 GGTGATTTAGATATGAGTGTGGCA 58.632 41.667 0.00 0.00 0.00 4.92
295 296 4.757149 GGGTGATTTAGATATGAGTGTGGC 59.243 45.833 0.00 0.00 0.00 5.01
296 297 5.072329 AGGGGTGATTTAGATATGAGTGTGG 59.928 44.000 0.00 0.00 0.00 4.17
297 298 6.179906 AGGGGTGATTTAGATATGAGTGTG 57.820 41.667 0.00 0.00 0.00 3.82
298 299 7.202102 GGTTAGGGGTGATTTAGATATGAGTGT 60.202 40.741 0.00 0.00 0.00 3.55
299 300 7.016661 AGGTTAGGGGTGATTTAGATATGAGTG 59.983 40.741 0.00 0.00 0.00 3.51
300 301 7.082972 AGGTTAGGGGTGATTTAGATATGAGT 58.917 38.462 0.00 0.00 0.00 3.41
301 302 7.456269 AGAGGTTAGGGGTGATTTAGATATGAG 59.544 40.741 0.00 0.00 0.00 2.90
302 303 7.313731 AGAGGTTAGGGGTGATTTAGATATGA 58.686 38.462 0.00 0.00 0.00 2.15
303 304 7.560796 AGAGGTTAGGGGTGATTTAGATATG 57.439 40.000 0.00 0.00 0.00 1.78
304 305 9.273137 CATAGAGGTTAGGGGTGATTTAGATAT 57.727 37.037 0.00 0.00 0.00 1.63
305 306 7.180408 GCATAGAGGTTAGGGGTGATTTAGATA 59.820 40.741 0.00 0.00 0.00 1.98
306 307 6.013293 GCATAGAGGTTAGGGGTGATTTAGAT 60.013 42.308 0.00 0.00 0.00 1.98
307 308 5.307196 GCATAGAGGTTAGGGGTGATTTAGA 59.693 44.000 0.00 0.00 0.00 2.10
308 309 5.308237 AGCATAGAGGTTAGGGGTGATTTAG 59.692 44.000 0.00 0.00 0.00 1.85
309 310 5.224441 AGCATAGAGGTTAGGGGTGATTTA 58.776 41.667 0.00 0.00 0.00 1.40
310 311 4.047883 AGCATAGAGGTTAGGGGTGATTT 58.952 43.478 0.00 0.00 0.00 2.17
311 312 3.669949 AGCATAGAGGTTAGGGGTGATT 58.330 45.455 0.00 0.00 0.00 2.57
312 313 3.352611 AGCATAGAGGTTAGGGGTGAT 57.647 47.619 0.00 0.00 0.00 3.06
313 314 2.868964 AGCATAGAGGTTAGGGGTGA 57.131 50.000 0.00 0.00 0.00 4.02
314 315 4.160329 TGATAGCATAGAGGTTAGGGGTG 58.840 47.826 0.00 0.00 0.00 4.61
315 316 4.140663 ACTGATAGCATAGAGGTTAGGGGT 60.141 45.833 0.00 0.00 0.00 4.95
316 317 4.421131 ACTGATAGCATAGAGGTTAGGGG 58.579 47.826 0.00 0.00 0.00 4.79
317 318 6.249951 AGTACTGATAGCATAGAGGTTAGGG 58.750 44.000 0.00 0.00 0.00 3.53
318 319 8.322828 TCTAGTACTGATAGCATAGAGGTTAGG 58.677 40.741 5.39 0.00 0.00 2.69
319 320 9.378551 CTCTAGTACTGATAGCATAGAGGTTAG 57.621 40.741 5.39 0.00 34.97 2.34
320 321 8.322828 CCTCTAGTACTGATAGCATAGAGGTTA 58.677 40.741 20.26 0.00 45.94 2.85
321 322 7.172342 CCTCTAGTACTGATAGCATAGAGGTT 58.828 42.308 20.26 0.00 45.94 3.50
322 323 6.717289 CCTCTAGTACTGATAGCATAGAGGT 58.283 44.000 20.26 1.96 45.94 3.85
324 325 7.165485 ACACCTCTAGTACTGATAGCATAGAG 58.835 42.308 5.39 6.84 37.21 2.43
325 326 7.080653 ACACCTCTAGTACTGATAGCATAGA 57.919 40.000 5.39 0.00 0.00 1.98
326 327 7.445707 TGAACACCTCTAGTACTGATAGCATAG 59.554 40.741 5.39 0.00 0.00 2.23
327 328 7.287810 TGAACACCTCTAGTACTGATAGCATA 58.712 38.462 5.39 0.00 0.00 3.14
328 329 6.129874 TGAACACCTCTAGTACTGATAGCAT 58.870 40.000 5.39 0.00 0.00 3.79
329 330 5.506708 TGAACACCTCTAGTACTGATAGCA 58.493 41.667 5.39 0.00 0.00 3.49
330 331 6.442952 CATGAACACCTCTAGTACTGATAGC 58.557 44.000 5.39 0.00 0.00 2.97
331 332 6.264292 AGCATGAACACCTCTAGTACTGATAG 59.736 42.308 5.39 0.00 0.00 2.08
332 333 6.129874 AGCATGAACACCTCTAGTACTGATA 58.870 40.000 5.39 0.00 0.00 2.15
333 334 4.959210 AGCATGAACACCTCTAGTACTGAT 59.041 41.667 5.39 0.00 0.00 2.90
334 335 4.344978 AGCATGAACACCTCTAGTACTGA 58.655 43.478 5.39 0.22 0.00 3.41
335 336 4.727507 AGCATGAACACCTCTAGTACTG 57.272 45.455 5.39 0.00 0.00 2.74
336 337 6.607600 TCATAAGCATGAACACCTCTAGTACT 59.392 38.462 0.00 0.00 38.25 2.73
337 338 6.806751 TCATAAGCATGAACACCTCTAGTAC 58.193 40.000 0.00 0.00 38.25 2.73
338 339 7.603180 ATCATAAGCATGAACACCTCTAGTA 57.397 36.000 0.00 0.00 44.27 1.82
339 340 5.939764 TCATAAGCATGAACACCTCTAGT 57.060 39.130 0.00 0.00 38.25 2.57
340 341 7.601886 CCTTATCATAAGCATGAACACCTCTAG 59.398 40.741 0.00 0.00 44.27 2.43
341 342 7.071196 ACCTTATCATAAGCATGAACACCTCTA 59.929 37.037 0.00 0.00 44.27 2.43
342 343 6.126652 ACCTTATCATAAGCATGAACACCTCT 60.127 38.462 0.00 0.00 44.27 3.69
343 344 6.058183 ACCTTATCATAAGCATGAACACCTC 58.942 40.000 0.00 0.00 44.27 3.85
344 345 6.006275 ACCTTATCATAAGCATGAACACCT 57.994 37.500 0.00 0.00 44.27 4.00
345 346 6.058183 AGACCTTATCATAAGCATGAACACC 58.942 40.000 0.00 0.00 44.27 4.16
346 347 7.412853 CAAGACCTTATCATAAGCATGAACAC 58.587 38.462 0.00 0.00 44.27 3.32
347 348 6.543465 CCAAGACCTTATCATAAGCATGAACA 59.457 38.462 0.00 0.00 44.27 3.18
348 349 6.543831 ACCAAGACCTTATCATAAGCATGAAC 59.456 38.462 0.00 0.00 44.27 3.18
349 350 6.662755 ACCAAGACCTTATCATAAGCATGAA 58.337 36.000 0.00 0.00 44.27 2.57
350 351 6.126796 TGACCAAGACCTTATCATAAGCATGA 60.127 38.462 0.00 0.00 45.15 3.07
351 352 6.057533 TGACCAAGACCTTATCATAAGCATG 58.942 40.000 0.00 0.00 0.00 4.06
352 353 6.252599 TGACCAAGACCTTATCATAAGCAT 57.747 37.500 0.00 0.00 0.00 3.79
353 354 5.692115 TGACCAAGACCTTATCATAAGCA 57.308 39.130 0.00 0.00 0.00 3.91
354 355 6.529220 AGATGACCAAGACCTTATCATAAGC 58.471 40.000 0.00 0.00 31.59 3.09
355 356 8.206867 TCAAGATGACCAAGACCTTATCATAAG 58.793 37.037 0.00 0.00 31.59 1.73
356 357 7.987458 GTCAAGATGACCAAGACCTTATCATAA 59.013 37.037 0.00 0.00 41.37 1.90
357 358 7.125659 TGTCAAGATGACCAAGACCTTATCATA 59.874 37.037 7.94 0.00 46.40 2.15
358 359 6.070021 TGTCAAGATGACCAAGACCTTATCAT 60.070 38.462 7.94 7.86 46.40 2.45
359 360 5.248248 TGTCAAGATGACCAAGACCTTATCA 59.752 40.000 7.94 0.00 46.40 2.15
360 361 5.734720 TGTCAAGATGACCAAGACCTTATC 58.265 41.667 7.94 0.00 46.40 1.75
361 362 5.738909 CTGTCAAGATGACCAAGACCTTAT 58.261 41.667 7.94 0.00 46.40 1.73
362 363 4.563580 GCTGTCAAGATGACCAAGACCTTA 60.564 45.833 7.94 0.00 46.40 2.69
363 364 3.808618 GCTGTCAAGATGACCAAGACCTT 60.809 47.826 7.94 0.00 46.40 3.50
364 365 2.289945 GCTGTCAAGATGACCAAGACCT 60.290 50.000 7.94 0.00 46.40 3.85
365 366 2.079925 GCTGTCAAGATGACCAAGACC 58.920 52.381 7.94 0.00 46.40 3.85
366 367 1.728971 CGCTGTCAAGATGACCAAGAC 59.271 52.381 7.94 0.00 46.40 3.01
367 368 1.941209 GCGCTGTCAAGATGACCAAGA 60.941 52.381 0.00 0.00 46.40 3.02
368 369 0.445436 GCGCTGTCAAGATGACCAAG 59.555 55.000 0.00 1.51 46.40 3.61
369 370 0.955428 GGCGCTGTCAAGATGACCAA 60.955 55.000 7.64 0.00 46.40 3.67
370 371 1.375908 GGCGCTGTCAAGATGACCA 60.376 57.895 7.64 0.00 46.40 4.02
371 372 1.078848 AGGCGCTGTCAAGATGACC 60.079 57.895 7.64 0.00 46.40 4.02
373 374 0.610174 AAGAGGCGCTGTCAAGATGA 59.390 50.000 7.64 0.00 0.00 2.92
374 375 0.725686 CAAGAGGCGCTGTCAAGATG 59.274 55.000 7.64 0.00 0.00 2.90
375 376 1.023513 GCAAGAGGCGCTGTCAAGAT 61.024 55.000 7.64 0.00 0.00 2.40
376 377 1.669115 GCAAGAGGCGCTGTCAAGA 60.669 57.895 7.64 0.00 0.00 3.02
377 378 2.866028 GCAAGAGGCGCTGTCAAG 59.134 61.111 7.64 2.72 0.00 3.02
394 395 1.636988 CTTGAAAGTACGGCGGGTAG 58.363 55.000 13.24 0.00 0.00 3.18
395 396 0.390209 GCTTGAAAGTACGGCGGGTA 60.390 55.000 13.24 0.00 0.00 3.69
396 397 1.670083 GCTTGAAAGTACGGCGGGT 60.670 57.895 13.24 0.00 0.00 5.28
397 398 1.635663 CTGCTTGAAAGTACGGCGGG 61.636 60.000 13.24 0.00 0.00 6.13
398 399 1.635663 CCTGCTTGAAAGTACGGCGG 61.636 60.000 13.24 0.00 0.00 6.13
399 400 1.635663 CCCTGCTTGAAAGTACGGCG 61.636 60.000 4.80 4.80 0.00 6.46
400 401 1.923227 GCCCTGCTTGAAAGTACGGC 61.923 60.000 5.66 5.66 36.21 5.68
401 402 0.605319 TGCCCTGCTTGAAAGTACGG 60.605 55.000 0.00 0.00 0.00 4.02
402 403 0.798776 CTGCCCTGCTTGAAAGTACG 59.201 55.000 0.00 0.00 0.00 3.67
403 404 0.523519 GCTGCCCTGCTTGAAAGTAC 59.476 55.000 0.00 0.00 0.00 2.73
404 405 0.110295 TGCTGCCCTGCTTGAAAGTA 59.890 50.000 0.00 0.00 0.00 2.24
405 406 0.756442 TTGCTGCCCTGCTTGAAAGT 60.756 50.000 0.00 0.00 0.00 2.66
406 407 0.390124 TTTGCTGCCCTGCTTGAAAG 59.610 50.000 0.00 0.00 0.00 2.62
407 408 0.390124 CTTTGCTGCCCTGCTTGAAA 59.610 50.000 0.00 0.00 0.00 2.69
408 409 1.466025 CCTTTGCTGCCCTGCTTGAA 61.466 55.000 0.00 0.00 0.00 2.69
409 410 1.904865 CCTTTGCTGCCCTGCTTGA 60.905 57.895 0.00 0.00 0.00 3.02
410 411 2.654877 CCTTTGCTGCCCTGCTTG 59.345 61.111 0.00 0.00 0.00 4.01
411 412 3.308705 GCCTTTGCTGCCCTGCTT 61.309 61.111 0.00 0.00 33.53 3.91
419 420 4.729856 GCAAGGCGGCCTTTGCTG 62.730 66.667 30.92 21.34 41.69 4.41
421 422 3.805891 TTTGCAAGGCGGCCTTTGC 62.806 57.895 31.53 31.53 41.69 3.68
422 423 1.955663 GTTTGCAAGGCGGCCTTTG 60.956 57.895 30.92 24.49 41.69 2.77
423 424 2.421314 GTTTGCAAGGCGGCCTTT 59.579 55.556 30.92 14.15 41.69 3.11
424 425 3.615709 GGTTTGCAAGGCGGCCTT 61.616 61.111 28.12 28.12 45.88 4.35
427 428 3.647649 GATGGGTTTGCAAGGCGGC 62.648 63.158 0.00 0.00 0.00 6.53
428 429 1.814772 TTGATGGGTTTGCAAGGCGG 61.815 55.000 0.00 0.00 0.00 6.13
429 430 0.247185 ATTGATGGGTTTGCAAGGCG 59.753 50.000 0.00 0.00 0.00 5.52
430 431 2.289569 TGAATTGATGGGTTTGCAAGGC 60.290 45.455 0.00 0.00 0.00 4.35
431 432 3.681593 TGAATTGATGGGTTTGCAAGG 57.318 42.857 0.00 0.00 0.00 3.61
432 433 4.571919 ACATGAATTGATGGGTTTGCAAG 58.428 39.130 9.78 0.00 0.00 4.01
433 434 4.563168 GGACATGAATTGATGGGTTTGCAA 60.563 41.667 9.78 0.00 0.00 4.08
434 435 3.055963 GGACATGAATTGATGGGTTTGCA 60.056 43.478 9.78 0.00 0.00 4.08
435 436 3.196254 AGGACATGAATTGATGGGTTTGC 59.804 43.478 9.78 0.00 0.00 3.68
436 437 6.509656 CATAGGACATGAATTGATGGGTTTG 58.490 40.000 9.78 0.00 0.00 2.93
437 438 5.069516 GCATAGGACATGAATTGATGGGTTT 59.930 40.000 9.78 0.00 0.00 3.27
438 439 4.586001 GCATAGGACATGAATTGATGGGTT 59.414 41.667 9.78 0.00 0.00 4.11
439 440 4.141088 AGCATAGGACATGAATTGATGGGT 60.141 41.667 9.78 0.00 0.00 4.51
440 441 4.404640 AGCATAGGACATGAATTGATGGG 58.595 43.478 9.78 0.00 0.00 4.00
441 442 5.533528 TCAAGCATAGGACATGAATTGATGG 59.466 40.000 9.78 0.00 0.00 3.51
442 443 6.294010 CCTCAAGCATAGGACATGAATTGATG 60.294 42.308 3.09 3.09 36.08 3.07
443 444 5.768662 CCTCAAGCATAGGACATGAATTGAT 59.231 40.000 0.00 0.00 36.08 2.57
444 445 5.104402 TCCTCAAGCATAGGACATGAATTGA 60.104 40.000 0.00 0.00 38.24 2.57
445 446 5.128205 TCCTCAAGCATAGGACATGAATTG 58.872 41.667 0.00 0.00 38.24 2.32
446 447 5.378230 TCCTCAAGCATAGGACATGAATT 57.622 39.130 0.00 0.00 38.24 2.17
447 448 5.314529 CATCCTCAAGCATAGGACATGAAT 58.685 41.667 0.00 0.00 45.78 2.57
448 449 4.445305 CCATCCTCAAGCATAGGACATGAA 60.445 45.833 0.00 0.00 45.78 2.57
449 450 3.072038 CCATCCTCAAGCATAGGACATGA 59.928 47.826 0.00 0.00 45.78 3.07
450 451 3.181447 ACCATCCTCAAGCATAGGACATG 60.181 47.826 4.05 0.00 45.78 3.21
451 452 3.051581 ACCATCCTCAAGCATAGGACAT 58.948 45.455 4.05 0.00 45.78 3.06
452 453 2.481441 ACCATCCTCAAGCATAGGACA 58.519 47.619 4.05 0.00 45.78 4.02
453 454 3.209410 CAACCATCCTCAAGCATAGGAC 58.791 50.000 4.05 0.00 45.78 3.85
454 455 2.173356 CCAACCATCCTCAAGCATAGGA 59.827 50.000 4.41 4.41 46.96 2.94
455 456 2.092212 ACCAACCATCCTCAAGCATAGG 60.092 50.000 0.00 0.00 35.26 2.57
456 457 3.287867 ACCAACCATCCTCAAGCATAG 57.712 47.619 0.00 0.00 0.00 2.23
457 458 3.737559 AACCAACCATCCTCAAGCATA 57.262 42.857 0.00 0.00 0.00 3.14
458 459 2.610438 AACCAACCATCCTCAAGCAT 57.390 45.000 0.00 0.00 0.00 3.79
459 460 2.238521 GAAACCAACCATCCTCAAGCA 58.761 47.619 0.00 0.00 0.00 3.91
460 461 1.546029 GGAAACCAACCATCCTCAAGC 59.454 52.381 0.00 0.00 0.00 4.01
461 462 3.160679 AGGAAACCAACCATCCTCAAG 57.839 47.619 0.00 0.00 39.36 3.02
570 577 6.211505 TCCATGAGATGAGGAAGAGAGATA 57.788 41.667 0.00 0.00 0.00 1.98
590 607 3.371034 TCGGAAGAAGATGGTACATCCA 58.629 45.455 5.67 0.00 44.34 3.41
591 608 3.800604 GCTCGGAAGAAGATGGTACATCC 60.801 52.174 5.67 0.00 42.32 3.51
593 610 2.223829 CGCTCGGAAGAAGATGGTACAT 60.224 50.000 0.00 0.00 42.32 2.29
594 611 1.134367 CGCTCGGAAGAAGATGGTACA 59.866 52.381 0.00 0.00 42.35 2.90
597 614 1.153549 GCGCTCGGAAGAAGATGGT 60.154 57.895 0.00 0.00 41.32 3.55
712 732 3.899545 GACCGGGGTGAGGGTGAGA 62.900 68.421 6.32 0.00 36.46 3.27
714 734 3.899545 GAGACCGGGGTGAGGGTGA 62.900 68.421 6.32 0.00 36.46 4.02
761 782 2.759973 TCTCCTGGTAGCAGGCCG 60.760 66.667 32.01 24.51 42.00 6.13
769 792 1.623811 GCAGTTTCCACTCTCCTGGTA 59.376 52.381 0.00 0.00 32.50 3.25
793 817 1.593196 CAAGCTTGGACTCACCGAAA 58.407 50.000 19.14 0.00 42.61 3.46
828 852 2.712057 TTCTACTCAACGGTCGAACC 57.288 50.000 0.00 0.00 34.05 3.62
835 859 5.356882 TCATTTTGCTTTCTACTCAACGG 57.643 39.130 0.00 0.00 0.00 4.44
836 860 7.148918 CCAAATCATTTTGCTTTCTACTCAACG 60.149 37.037 0.00 0.00 40.77 4.10
862 888 1.188863 ACCAAATTCAGATGGGCTGC 58.811 50.000 0.00 0.00 44.52 5.25
966 1067 1.219393 GGTCTTGCTCCTTCCTCCG 59.781 63.158 0.00 0.00 0.00 4.63
968 1069 0.539518 GGAGGTCTTGCTCCTTCCTC 59.460 60.000 0.00 0.00 42.53 3.71
1286 1396 3.799432 TGTAGGTGTAAATGTTGGGCT 57.201 42.857 0.00 0.00 0.00 5.19
1442 1552 3.092511 GGGCCTCCTCCATCTGCA 61.093 66.667 0.84 0.00 0.00 4.41
1609 1723 0.480690 ACCCTGTTGTATGCCACCAA 59.519 50.000 0.00 0.00 0.00 3.67
1781 1898 1.616159 ACCAACCATTTGTCGAAGGG 58.384 50.000 1.76 1.76 44.71 3.95
1824 1941 6.741724 TCCATGGATCAGGCTAGTATATGTA 58.258 40.000 11.44 0.00 0.00 2.29
1897 2014 3.945285 GGTTTGACACCTTGACTTCTCAA 59.055 43.478 0.00 0.00 43.29 3.02
1970 2087 7.797038 AAAAATTCTGCAGCTTCTTTGATTT 57.203 28.000 9.47 2.75 0.00 2.17
2005 2122 1.566231 AGGTTTATGGCCCTTCTCAGG 59.434 52.381 0.00 0.00 40.45 3.86
2037 2154 7.980099 GCGTACCCATAAAGCATAATAGAGTAT 59.020 37.037 0.00 0.00 0.00 2.12
2038 2155 7.177921 AGCGTACCCATAAAGCATAATAGAGTA 59.822 37.037 0.00 0.00 0.00 2.59
2190 2309 6.208204 ACATGTCTTTGAAGAAAAGCATAGCT 59.792 34.615 0.00 0.00 44.30 3.32
2263 2382 1.602237 CCACTCTGCAATACCCGGT 59.398 57.895 0.00 0.00 0.00 5.28
2339 4067 4.573201 TGCACCTGTAAACAGTTGAGTTAC 59.427 41.667 11.37 0.00 38.47 2.50
2408 4136 7.824289 CCTTGGTCTTCATTTCAGTAGTCAATA 59.176 37.037 0.00 0.00 0.00 1.90
2414 4142 4.911390 ACCCTTGGTCTTCATTTCAGTAG 58.089 43.478 0.00 0.00 0.00 2.57
2473 4202 2.301870 GTTGTGTCATGAGGTACCCTGA 59.698 50.000 8.74 6.81 31.76 3.86
2496 4387 3.559069 CCTGGATCATGCACCTGTAAAT 58.441 45.455 0.00 0.00 0.00 1.40
2592 4494 4.741928 ATCCTTCCATTACCATTACCCC 57.258 45.455 0.00 0.00 0.00 4.95
2692 4595 3.181329 TCTTCCATCTTGGCAACTAGGA 58.819 45.455 0.00 0.39 40.10 2.94
2694 4597 3.376546 GCTTCTTCCATCTTGGCAACTAG 59.623 47.826 0.00 0.00 37.47 2.57
2794 4698 4.802039 CCAGCATCGATTCTTCCATTTTTG 59.198 41.667 0.00 0.00 0.00 2.44
2822 4726 8.863872 AAATTGTAAGATACAGGCTAACACTT 57.136 30.769 0.00 0.00 40.24 3.16
2830 4734 9.722056 CAGAAACATAAATTGTAAGATACAGGC 57.278 33.333 0.00 0.00 40.24 4.85
3019 5009 5.982516 TGACATGCAACATTTACCAAAGAAC 59.017 36.000 0.00 0.00 0.00 3.01
3020 5010 6.154203 TGACATGCAACATTTACCAAAGAA 57.846 33.333 0.00 0.00 0.00 2.52
3080 5070 4.953667 TCAGCTATCTAATCAGGCAACAG 58.046 43.478 0.00 0.00 41.41 3.16
3104 5095 8.906867 ACACCATTATATTTTCAGTTCCATCAG 58.093 33.333 0.00 0.00 0.00 2.90
3269 5264 3.598019 TTCCGAACCTGTGGTGTATAC 57.402 47.619 0.00 0.00 35.34 1.47
3472 6134 9.212641 CAATTCTATGGTAATCACAGAGGTATG 57.787 37.037 0.00 0.00 0.00 2.39


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.