Multiple sequence alignment - TraesCS6A01G100600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G100600 chr6A 100.000 5326 0 0 728 6053 68139410 68134085 0.000000e+00 9836.0
1 TraesCS6A01G100600 chr6A 78.965 1797 291 61 2226 3980 68137632 68135881 0.000000e+00 1144.0
2 TraesCS6A01G100600 chr6A 78.953 1796 293 58 2506 4257 68137912 68136158 0.000000e+00 1144.0
3 TraesCS6A01G100600 chr6A 84.821 1087 132 25 2223 3296 68136930 68135864 0.000000e+00 1062.0
4 TraesCS6A01G100600 chr6A 84.821 1087 132 25 3208 4274 68137915 68136842 0.000000e+00 1062.0
5 TraesCS6A01G100600 chr6A 78.066 1696 271 81 2200 3844 68137522 68135877 0.000000e+00 977.0
6 TraesCS6A01G100600 chr6A 100.000 517 0 0 1 517 68140137 68139621 0.000000e+00 955.0
7 TraesCS6A01G100600 chr6A 79.942 1376 202 57 2223 3562 68137216 68135879 0.000000e+00 944.0
8 TraesCS6A01G100600 chr6A 79.927 1375 204 55 2922 4259 68137915 68136576 0.000000e+00 944.0
9 TraesCS6A01G100600 chr6A 80.744 753 118 20 1089 1832 68137709 68136975 4.100000e-156 562.0
10 TraesCS6A01G100600 chr6A 80.744 753 118 20 2429 3163 68139049 68138306 4.100000e-156 562.0
11 TraesCS6A01G100600 chr6A 80.381 734 118 20 1083 1806 68136731 68136014 8.930000e-148 534.0
12 TraesCS6A01G100600 chr6A 80.408 735 116 20 3407 4124 68139055 68138332 8.930000e-148 534.0
13 TraesCS6A01G100600 chr6A 76.023 880 159 33 932 1804 185950392 185951226 5.650000e-110 409.0
14 TraesCS6A01G100600 chr6A 75.786 859 158 30 932 1784 186125947 186126761 7.360000e-104 388.0
15 TraesCS6A01G100600 chr6A 80.000 360 55 12 3910 4259 68137915 68137563 3.620000e-62 250.0
16 TraesCS6A01G100600 chr6D 90.351 3648 223 59 2495 6050 47615635 47619245 0.000000e+00 4667.0
17 TraesCS6A01G100600 chr6D 80.948 1963 266 75 2067 3979 47615496 47617400 0.000000e+00 1454.0
18 TraesCS6A01G100600 chr6D 88.380 1222 115 19 2078 3287 55870440 55871646 0.000000e+00 1445.0
19 TraesCS6A01G100600 chr6D 81.178 1833 252 67 2353 4140 47615635 47617419 0.000000e+00 1387.0
20 TraesCS6A01G100600 chr6D 89.030 948 78 18 728 1663 55869155 55870088 0.000000e+00 1151.0
21 TraesCS6A01G100600 chr6D 87.202 922 92 15 2220 3120 47616354 47617270 0.000000e+00 1026.0
22 TraesCS6A01G100600 chr6D 83.183 1106 151 22 3200 4284 55870573 55871664 0.000000e+00 979.0
23 TraesCS6A01G100600 chr6D 81.291 1224 159 48 2223 3401 47616067 47617265 0.000000e+00 928.0
24 TraesCS6A01G100600 chr6D 81.885 1093 153 31 3196 4259 47615635 47616711 0.000000e+00 880.0
25 TraesCS6A01G100600 chr6D 94.610 538 23 2 728 1265 47614145 47614676 0.000000e+00 828.0
26 TraesCS6A01G100600 chr6D 82.383 965 132 30 3320 4260 47615620 47616570 0.000000e+00 806.0
27 TraesCS6A01G100600 chr6D 84.244 787 117 6 4354 5136 47291360 47290577 0.000000e+00 760.0
28 TraesCS6A01G100600 chr6D 79.906 1060 183 23 4022 5060 47344209 47343159 0.000000e+00 750.0
29 TraesCS6A01G100600 chr6D 77.397 1283 216 53 3049 4284 47615633 47616888 0.000000e+00 695.0
30 TraesCS6A01G100600 chr6D 77.991 1095 187 40 2912 3980 55870571 55871637 6.620000e-179 638.0
31 TraesCS6A01G100600 chr6D 84.654 593 73 9 1299 1886 55869581 55870160 5.260000e-160 575.0
32 TraesCS6A01G100600 chr6D 90.476 420 31 5 1440 1856 47614809 47615222 4.130000e-151 545.0
33 TraesCS6A01G100600 chr6D 79.867 750 118 24 1089 1828 55870785 55871511 8.990000e-143 518.0
34 TraesCS6A01G100600 chr6D 80.055 722 115 23 1083 1786 47616556 47617266 5.410000e-140 508.0
35 TraesCS6A01G100600 chr6D 85.399 363 52 1 3757 4119 47614809 47615170 5.730000e-100 375.0
36 TraesCS6A01G100600 chr6D 82.500 280 45 4 932 1210 47594710 47594986 6.060000e-60 243.0
37 TraesCS6A01G100600 chr6D 100.000 54 0 0 464 517 47614059 47614112 3.860000e-17 100.0
38 TraesCS6A01G100600 chr6D 98.113 53 1 0 427 479 47613992 47614044 6.460000e-15 93.5
39 TraesCS6A01G100600 chr6D 94.231 52 1 1 442 491 55869010 55869061 1.810000e-10 78.7
40 TraesCS6A01G100600 chr6D 97.143 35 1 0 1975 2009 10667812 10667778 6.550000e-05 60.2
41 TraesCS6A01G100600 chr6B 85.115 3312 388 67 728 3990 124095169 124091914 0.000000e+00 3288.0
42 TraesCS6A01G100600 chr6B 80.258 3490 447 129 2495 5844 124093693 124090306 0.000000e+00 2405.0
43 TraesCS6A01G100600 chr6B 87.797 1811 177 27 2353 4140 124093693 124091904 0.000000e+00 2080.0
44 TraesCS6A01G100600 chr6B 81.835 1668 246 41 2220 3859 124093543 124091905 0.000000e+00 1349.0
45 TraesCS6A01G100600 chr6B 87.093 922 102 11 2223 3134 124092836 124091922 0.000000e+00 1027.0
46 TraesCS6A01G100600 chr6B 81.150 1252 173 42 3049 4267 124093695 124092474 0.000000e+00 946.0
47 TraesCS6A01G100600 chr6B 81.040 1250 178 42 2223 3440 124093124 124091902 0.000000e+00 941.0
48 TraesCS6A01G100600 chr6B 80.367 1090 170 32 3196 4260 124093693 124092623 0.000000e+00 787.0
49 TraesCS6A01G100600 chr6B 85.126 753 111 1 4354 5105 124431862 124432614 0.000000e+00 769.0
50 TraesCS6A01G100600 chr6B 84.544 757 111 5 4355 5106 160182988 160183743 0.000000e+00 745.0
51 TraesCS6A01G100600 chr6B 79.412 1054 189 19 4017 5049 124387403 124388449 0.000000e+00 719.0
52 TraesCS6A01G100600 chr6B 80.109 734 120 20 1083 1806 124092637 124091920 1.930000e-144 523.0
53 TraesCS6A01G100600 chr6B 89.299 271 27 2 1 271 512238651 512238383 7.510000e-89 339.0
54 TraesCS6A01G100600 chr6B 74.791 718 152 16 932 1643 160179275 160179969 4.590000e-76 296.0
55 TraesCS6A01G100600 chr6B 89.231 195 14 6 5857 6050 124089857 124089669 2.820000e-58 237.0
56 TraesCS6A01G100600 chr6B 97.015 67 0 2 429 495 124095617 124095553 1.780000e-20 111.0
57 TraesCS6A01G100600 chr4A 85.077 784 114 3 4355 5136 9058938 9059720 0.000000e+00 797.0
58 TraesCS6A01G100600 chr4A 76.583 837 146 32 932 1762 9056484 9057276 1.210000e-111 414.0
59 TraesCS6A01G100600 chr4A 76.359 846 138 37 932 1774 8857913 8858699 1.220000e-106 398.0
60 TraesCS6A01G100600 chr2A 99.057 424 2 2 1 424 755743710 755743289 0.000000e+00 760.0
61 TraesCS6A01G100600 chr4B 83.715 786 121 6 4355 5136 574426535 574425753 0.000000e+00 736.0
62 TraesCS6A01G100600 chr7A 92.891 422 26 2 1 418 704909911 704910332 1.440000e-170 610.0
63 TraesCS6A01G100600 chr7A 83.824 68 7 4 380 444 5890684 5890618 1.820000e-05 62.1
64 TraesCS6A01G100600 chr5B 91.148 418 36 1 1 418 269986685 269987101 3.170000e-157 566.0
65 TraesCS6A01G100600 chr3B 90.670 418 37 2 1 417 10212018 10212434 6.850000e-154 555.0
66 TraesCS6A01G100600 chr1D 90.000 420 40 1 1 418 10422311 10421892 5.340000e-150 542.0
67 TraesCS6A01G100600 chr1D 97.976 247 5 0 34 280 443383169 443382923 4.330000e-116 429.0
68 TraesCS6A01G100600 chr1D 95.238 84 4 0 318 401 443379888 443379805 3.810000e-27 134.0
69 TraesCS6A01G100600 chr1D 94.231 52 3 0 280 331 443379955 443379904 5.030000e-11 80.5
70 TraesCS6A01G100600 chr1B 88.991 327 28 2 1 327 89497544 89497226 1.220000e-106 398.0
71 TraesCS6A01G100600 chr1B 93.846 65 4 0 325 389 89497066 89497002 1.390000e-16 99.0
72 TraesCS6A01G100600 chr1B 95.349 43 2 0 377 419 507544049 507544091 1.090000e-07 69.4
73 TraesCS6A01G100600 chr5A 89.474 57 4 2 362 417 680282620 680282565 3.030000e-08 71.3
74 TraesCS6A01G100600 chr2B 91.304 46 4 0 389 434 790846610 790846565 5.060000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G100600 chr6A 68134085 68140137 6052 True 1465.000000 9836 83.412286 1 6053 14 chr6A.!!$R1 6052
1 TraesCS6A01G100600 chr6A 185950392 185951226 834 False 409.000000 409 76.023000 932 1804 1 chr6A.!!$F1 872
2 TraesCS6A01G100600 chr6A 186125947 186126761 814 False 388.000000 388 75.786000 932 1784 1 chr6A.!!$F2 852
3 TraesCS6A01G100600 chr6D 47613992 47619245 5253 False 1020.892857 4667 86.520571 427 6050 14 chr6D.!!$F2 5623
4 TraesCS6A01G100600 chr6D 55869010 55871664 2654 False 769.242857 1445 85.333714 442 4284 7 chr6D.!!$F3 3842
5 TraesCS6A01G100600 chr6D 47290577 47291360 783 True 760.000000 760 84.244000 4354 5136 1 chr6D.!!$R2 782
6 TraesCS6A01G100600 chr6D 47343159 47344209 1050 True 750.000000 750 79.906000 4022 5060 1 chr6D.!!$R3 1038
7 TraesCS6A01G100600 chr6B 124089669 124095617 5948 True 1244.909091 3288 84.637273 429 6050 11 chr6B.!!$R2 5621
8 TraesCS6A01G100600 chr6B 124431862 124432614 752 False 769.000000 769 85.126000 4354 5105 1 chr6B.!!$F2 751
9 TraesCS6A01G100600 chr6B 124387403 124388449 1046 False 719.000000 719 79.412000 4017 5049 1 chr6B.!!$F1 1032
10 TraesCS6A01G100600 chr6B 160179275 160183743 4468 False 520.500000 745 79.667500 932 5106 2 chr6B.!!$F3 4174
11 TraesCS6A01G100600 chr4A 9056484 9059720 3236 False 605.500000 797 80.830000 932 5136 2 chr4A.!!$F2 4204
12 TraesCS6A01G100600 chr4A 8857913 8858699 786 False 398.000000 398 76.359000 932 1774 1 chr4A.!!$F1 842
13 TraesCS6A01G100600 chr4B 574425753 574426535 782 True 736.000000 736 83.715000 4355 5136 1 chr4B.!!$R1 781
14 TraesCS6A01G100600 chr1D 443379805 443383169 3364 True 214.500000 429 95.815000 34 401 3 chr1D.!!$R2 367
15 TraesCS6A01G100600 chr1B 89497002 89497544 542 True 248.500000 398 91.418500 1 389 2 chr1B.!!$R1 388

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
804 4117 1.133668 AGGGTAAGGAGCATTCATGGC 60.134 52.381 0.00 0.00 0.00 4.40 F
1399 5601 0.036010 AAGTGCTCGTGCTGCCTTAT 60.036 50.000 11.19 0.00 40.48 1.73 F
1402 5604 0.036483 TGCTCGTGCTGCCTTATCAA 60.036 50.000 11.19 0.00 40.48 2.57 F
1477 5679 0.099791 AAACGGTTTTGGTGCGAGTG 59.900 50.000 0.00 0.00 0.00 3.51 F
1499 5701 0.107831 TATGCGGTACATTGGGAGCC 59.892 55.000 0.00 0.00 40.38 4.70 F
2953 8714 0.039617 TTTGGTGCAAGTGCGTATGC 60.040 50.000 0.00 0.00 45.83 3.14 F
2970 8731 0.180171 TGCGGTACATTGGGATCCAG 59.820 55.000 15.23 2.55 33.81 3.86 F
2971 8732 0.468226 GCGGTACATTGGGATCCAGA 59.532 55.000 15.23 0.76 33.81 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1923 6195 0.099791 AAACTGACACGGGCAAAACG 59.900 50.000 0.00 0.0 37.36 3.60 R
2379 6716 0.108138 ACCGCATAAGCACTCTCACC 60.108 55.000 0.00 0.0 42.27 4.02 R
2951 8712 0.180171 CTGGATCCCAATGTACCGCA 59.820 55.000 9.90 0.0 30.80 5.69 R
2952 8713 0.468226 TCTGGATCCCAATGTACCGC 59.532 55.000 9.90 0.0 30.80 5.68 R
3070 8831 0.901124 AAGCACTTGCACCAAAACCA 59.099 45.000 3.62 0.0 45.16 3.67 R
4479 11682 0.238289 CACCTCGTGCAAACATGGTC 59.762 55.000 0.00 0.0 33.32 4.02 R
4758 11961 1.431243 ACATACATGGTGTTGGGGGTT 59.569 47.619 0.00 0.0 0.00 4.11 R
5378 12605 5.656416 CCTATCAGGGCAAGGATTAAAAACA 59.344 40.000 0.00 0.0 31.64 2.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.600449 AGATGCACAAGCTTATATCTTAGAAC 57.400 34.615 0.00 0.00 42.74 3.01
112 113 8.519492 ACACACACTTGCATATCAATTTTTAC 57.481 30.769 0.00 0.00 33.57 2.01
417 3548 3.806316 GCACGTGCACATTTACTAGTT 57.194 42.857 34.52 0.00 41.59 2.24
418 3549 3.479006 GCACGTGCACATTTACTAGTTG 58.521 45.455 34.52 0.00 41.59 3.16
419 3550 3.666902 GCACGTGCACATTTACTAGTTGG 60.667 47.826 34.52 0.00 41.59 3.77
420 3551 3.496884 CACGTGCACATTTACTAGTTGGT 59.503 43.478 18.64 0.00 0.00 3.67
421 3552 4.024387 CACGTGCACATTTACTAGTTGGTT 60.024 41.667 18.64 0.00 0.00 3.67
422 3553 4.212636 ACGTGCACATTTACTAGTTGGTTC 59.787 41.667 18.64 0.00 0.00 3.62
423 3554 4.212425 CGTGCACATTTACTAGTTGGTTCA 59.788 41.667 18.64 0.00 0.00 3.18
424 3555 5.277586 CGTGCACATTTACTAGTTGGTTCAA 60.278 40.000 18.64 0.00 0.00 2.69
425 3556 6.500041 GTGCACATTTACTAGTTGGTTCAAA 58.500 36.000 13.17 0.00 0.00 2.69
456 3587 2.559668 ACACACATTCAAGGGCATTCAG 59.440 45.455 0.00 0.00 0.00 3.02
804 4117 1.133668 AGGGTAAGGAGCATTCATGGC 60.134 52.381 0.00 0.00 0.00 4.40
820 4133 4.507710 TCATGGCGAGATATTATTCCAGC 58.492 43.478 0.00 0.00 0.00 4.85
823 4136 5.330455 TGGCGAGATATTATTCCAGCTAG 57.670 43.478 0.00 0.00 0.00 3.42
872 4189 1.671845 TGTTTCCAAACCACAGCGTAC 59.328 47.619 0.00 0.00 38.11 3.67
873 4190 1.671845 GTTTCCAAACCACAGCGTACA 59.328 47.619 0.00 0.00 32.82 2.90
1003 4325 9.430623 TCAATTTCGTAGTTGATCTAAACATGA 57.569 29.630 0.00 0.00 32.21 3.07
1248 4707 5.988310 TCTGGTAATTAAGGACGACTTGA 57.012 39.130 7.25 0.49 40.37 3.02
1382 5584 4.692625 CCAGATCACACACCTTCAAGTAAG 59.307 45.833 0.00 0.00 34.73 2.34
1383 5585 5.300752 CAGATCACACACCTTCAAGTAAGT 58.699 41.667 0.00 0.00 32.89 2.24
1384 5586 5.178252 CAGATCACACACCTTCAAGTAAGTG 59.822 44.000 0.00 0.00 32.89 3.16
1385 5587 3.202906 TCACACACCTTCAAGTAAGTGC 58.797 45.455 0.00 0.00 32.89 4.40
1386 5588 3.118408 TCACACACCTTCAAGTAAGTGCT 60.118 43.478 0.00 0.00 32.89 4.40
1387 5589 3.248602 CACACACCTTCAAGTAAGTGCTC 59.751 47.826 0.00 0.00 32.89 4.26
1388 5590 2.476619 CACACCTTCAAGTAAGTGCTCG 59.523 50.000 0.00 0.00 32.89 5.03
1389 5591 2.102588 ACACCTTCAAGTAAGTGCTCGT 59.897 45.455 0.00 0.00 32.89 4.18
1390 5592 2.476619 CACCTTCAAGTAAGTGCTCGTG 59.523 50.000 0.00 0.00 32.89 4.35
1391 5593 1.461127 CCTTCAAGTAAGTGCTCGTGC 59.539 52.381 1.71 1.71 32.89 5.34
1392 5594 2.408050 CTTCAAGTAAGTGCTCGTGCT 58.592 47.619 11.19 0.00 40.48 4.40
1393 5595 1.783284 TCAAGTAAGTGCTCGTGCTG 58.217 50.000 11.19 0.00 40.48 4.41
1394 5596 0.164647 CAAGTAAGTGCTCGTGCTGC 59.835 55.000 11.19 3.96 40.48 5.25
1395 5597 0.951040 AAGTAAGTGCTCGTGCTGCC 60.951 55.000 11.19 0.00 40.48 4.85
1396 5598 1.374758 GTAAGTGCTCGTGCTGCCT 60.375 57.895 11.19 1.39 40.48 4.75
1397 5599 0.951040 GTAAGTGCTCGTGCTGCCTT 60.951 55.000 11.19 11.67 40.48 4.35
1398 5600 0.606096 TAAGTGCTCGTGCTGCCTTA 59.394 50.000 11.19 10.80 40.48 2.69
1399 5601 0.036010 AAGTGCTCGTGCTGCCTTAT 60.036 50.000 11.19 0.00 40.48 1.73
1400 5602 0.460987 AGTGCTCGTGCTGCCTTATC 60.461 55.000 11.19 0.00 40.48 1.75
1401 5603 0.740868 GTGCTCGTGCTGCCTTATCA 60.741 55.000 11.19 0.00 40.48 2.15
1402 5604 0.036483 TGCTCGTGCTGCCTTATCAA 60.036 50.000 11.19 0.00 40.48 2.57
1403 5605 0.654683 GCTCGTGCTGCCTTATCAAG 59.345 55.000 1.41 0.00 36.03 3.02
1404 5606 2.009042 GCTCGTGCTGCCTTATCAAGT 61.009 52.381 1.41 0.00 36.03 3.16
1405 5607 2.350522 CTCGTGCTGCCTTATCAAGTT 58.649 47.619 0.00 0.00 0.00 2.66
1406 5608 2.076100 TCGTGCTGCCTTATCAAGTTG 58.924 47.619 0.00 0.00 0.00 3.16
1407 5609 2.076100 CGTGCTGCCTTATCAAGTTGA 58.924 47.619 8.27 8.27 0.00 3.18
1408 5610 2.159653 CGTGCTGCCTTATCAAGTTGAC 60.160 50.000 7.96 0.00 0.00 3.18
1409 5611 2.813754 GTGCTGCCTTATCAAGTTGACA 59.186 45.455 7.96 0.00 0.00 3.58
1410 5612 3.253188 GTGCTGCCTTATCAAGTTGACAA 59.747 43.478 7.96 1.34 0.00 3.18
1411 5613 4.081406 TGCTGCCTTATCAAGTTGACAAT 58.919 39.130 7.96 0.00 0.00 2.71
1412 5614 4.082625 TGCTGCCTTATCAAGTTGACAATG 60.083 41.667 7.96 0.94 0.00 2.82
1413 5615 4.082571 GCTGCCTTATCAAGTTGACAATGT 60.083 41.667 7.96 0.00 0.00 2.71
1414 5616 5.627499 TGCCTTATCAAGTTGACAATGTC 57.373 39.130 7.96 6.41 0.00 3.06
1415 5617 4.154015 TGCCTTATCAAGTTGACAATGTCG 59.846 41.667 7.96 0.00 34.95 4.35
1416 5618 4.154195 GCCTTATCAAGTTGACAATGTCGT 59.846 41.667 7.96 0.00 34.95 4.34
1417 5619 5.350365 GCCTTATCAAGTTGACAATGTCGTA 59.650 40.000 7.96 0.00 34.95 3.43
1418 5620 6.037172 GCCTTATCAAGTTGACAATGTCGTAT 59.963 38.462 7.96 0.00 34.95 3.06
1419 5621 7.401860 CCTTATCAAGTTGACAATGTCGTATG 58.598 38.462 7.96 5.57 34.95 2.39
1420 5622 7.064609 CCTTATCAAGTTGACAATGTCGTATGT 59.935 37.037 7.96 0.00 34.95 2.29
1421 5623 5.839262 TCAAGTTGACAATGTCGTATGTC 57.161 39.130 9.00 0.00 44.84 3.06
1422 5624 5.538118 TCAAGTTGACAATGTCGTATGTCT 58.462 37.500 9.00 0.00 44.86 3.41
1423 5625 5.405269 TCAAGTTGACAATGTCGTATGTCTG 59.595 40.000 9.00 0.44 44.86 3.51
1424 5626 5.134202 AGTTGACAATGTCGTATGTCTGA 57.866 39.130 9.00 0.00 44.86 3.27
1425 5627 5.538118 AGTTGACAATGTCGTATGTCTGAA 58.462 37.500 9.00 0.00 44.86 3.02
1426 5628 6.166279 AGTTGACAATGTCGTATGTCTGAAT 58.834 36.000 9.00 0.00 44.86 2.57
1427 5629 6.311445 AGTTGACAATGTCGTATGTCTGAATC 59.689 38.462 9.00 0.00 44.86 2.52
1428 5630 5.719173 TGACAATGTCGTATGTCTGAATCA 58.281 37.500 9.00 0.00 44.86 2.57
1429 5631 6.340522 TGACAATGTCGTATGTCTGAATCAT 58.659 36.000 9.00 0.00 44.86 2.45
1430 5632 6.476706 TGACAATGTCGTATGTCTGAATCATC 59.523 38.462 9.00 0.00 44.86 2.92
1431 5633 6.577103 ACAATGTCGTATGTCTGAATCATCT 58.423 36.000 0.00 0.00 0.00 2.90
1432 5634 6.699204 ACAATGTCGTATGTCTGAATCATCTC 59.301 38.462 0.00 0.00 0.00 2.75
1433 5635 5.835113 TGTCGTATGTCTGAATCATCTCA 57.165 39.130 0.00 0.00 0.00 3.27
1434 5636 6.396829 TGTCGTATGTCTGAATCATCTCAT 57.603 37.500 0.00 0.00 0.00 2.90
1435 5637 7.510549 TGTCGTATGTCTGAATCATCTCATA 57.489 36.000 0.00 0.00 0.00 2.15
1436 5638 7.588512 TGTCGTATGTCTGAATCATCTCATAG 58.411 38.462 0.00 0.00 0.00 2.23
1437 5639 7.229506 TGTCGTATGTCTGAATCATCTCATAGT 59.770 37.037 0.00 0.00 0.00 2.12
1438 5640 7.536964 GTCGTATGTCTGAATCATCTCATAGTG 59.463 40.741 0.00 0.00 0.00 2.74
1439 5641 7.229506 TCGTATGTCTGAATCATCTCATAGTGT 59.770 37.037 0.00 0.00 0.00 3.55
1440 5642 7.325579 CGTATGTCTGAATCATCTCATAGTGTG 59.674 40.741 0.00 0.00 0.00 3.82
1441 5643 6.535963 TGTCTGAATCATCTCATAGTGTGT 57.464 37.500 0.00 0.00 0.00 3.72
1442 5644 6.939622 TGTCTGAATCATCTCATAGTGTGTT 58.060 36.000 0.00 0.00 0.00 3.32
1443 5645 8.066612 TGTCTGAATCATCTCATAGTGTGTTA 57.933 34.615 0.00 0.00 0.00 2.41
1444 5646 8.699130 TGTCTGAATCATCTCATAGTGTGTTAT 58.301 33.333 0.00 0.00 0.00 1.89
1445 5647 9.539825 GTCTGAATCATCTCATAGTGTGTTATT 57.460 33.333 0.00 0.00 0.00 1.40
1448 5650 9.330063 TGAATCATCTCATAGTGTGTTATTTCC 57.670 33.333 0.00 0.00 0.00 3.13
1449 5651 9.553064 GAATCATCTCATAGTGTGTTATTTCCT 57.447 33.333 0.00 0.00 0.00 3.36
1462 5664 9.968743 GTGTGTTATTTCCTATAGAAGAAAACG 57.031 33.333 0.00 0.00 35.72 3.60
1463 5665 9.158233 TGTGTTATTTCCTATAGAAGAAAACGG 57.842 33.333 0.00 0.00 35.72 4.44
1464 5666 9.159364 GTGTTATTTCCTATAGAAGAAAACGGT 57.841 33.333 0.00 0.00 35.72 4.83
1465 5667 9.729281 TGTTATTTCCTATAGAAGAAAACGGTT 57.271 29.630 0.00 0.00 35.72 4.44
1469 5671 7.443259 TTCCTATAGAAGAAAACGGTTTTGG 57.557 36.000 22.44 14.32 31.94 3.28
1470 5672 6.536447 TCCTATAGAAGAAAACGGTTTTGGT 58.464 36.000 22.44 10.31 31.94 3.67
1471 5673 6.428771 TCCTATAGAAGAAAACGGTTTTGGTG 59.571 38.462 22.44 5.10 31.94 4.17
1472 5674 3.159353 AGAAGAAAACGGTTTTGGTGC 57.841 42.857 22.44 8.98 31.94 5.01
1473 5675 1.849829 GAAGAAAACGGTTTTGGTGCG 59.150 47.619 22.44 0.00 31.94 5.34
1474 5676 1.096416 AGAAAACGGTTTTGGTGCGA 58.904 45.000 22.44 0.00 31.94 5.10
1475 5677 1.064952 AGAAAACGGTTTTGGTGCGAG 59.935 47.619 22.44 0.00 31.94 5.03
1476 5678 0.812549 AAAACGGTTTTGGTGCGAGT 59.187 45.000 17.42 0.00 0.00 4.18
1477 5679 0.099791 AAACGGTTTTGGTGCGAGTG 59.900 50.000 0.00 0.00 0.00 3.51
1478 5680 2.051345 CGGTTTTGGTGCGAGTGC 60.051 61.111 0.00 0.00 43.20 4.40
1479 5681 2.542907 CGGTTTTGGTGCGAGTGCT 61.543 57.895 0.00 0.00 43.34 4.40
1480 5682 1.733526 GGTTTTGGTGCGAGTGCTT 59.266 52.632 0.00 0.00 43.34 3.91
1481 5683 0.948678 GGTTTTGGTGCGAGTGCTTA 59.051 50.000 0.00 0.00 43.34 3.09
1482 5684 1.539827 GGTTTTGGTGCGAGTGCTTAT 59.460 47.619 0.00 0.00 43.34 1.73
1483 5685 2.584791 GTTTTGGTGCGAGTGCTTATG 58.415 47.619 0.00 0.00 43.34 1.90
1484 5686 0.521291 TTTGGTGCGAGTGCTTATGC 59.479 50.000 0.00 0.00 43.34 3.14
1485 5687 1.634757 TTGGTGCGAGTGCTTATGCG 61.635 55.000 0.00 0.00 43.34 4.73
1486 5688 2.703409 GTGCGAGTGCTTATGCGG 59.297 61.111 0.00 0.00 43.34 5.69
1487 5689 2.100631 GTGCGAGTGCTTATGCGGT 61.101 57.895 0.00 0.00 43.34 5.68
1488 5690 0.804544 GTGCGAGTGCTTATGCGGTA 60.805 55.000 0.00 0.00 43.34 4.02
1489 5691 0.804544 TGCGAGTGCTTATGCGGTAC 60.805 55.000 0.00 0.00 43.34 3.34
1490 5692 0.804544 GCGAGTGCTTATGCGGTACA 60.805 55.000 0.00 0.00 43.34 2.90
1491 5693 1.852942 CGAGTGCTTATGCGGTACAT 58.147 50.000 0.00 0.00 43.34 2.29
1492 5694 2.201732 CGAGTGCTTATGCGGTACATT 58.798 47.619 0.00 0.00 43.34 2.71
1493 5695 2.033747 CGAGTGCTTATGCGGTACATTG 60.034 50.000 0.00 0.00 43.34 2.82
1494 5696 2.287915 GAGTGCTTATGCGGTACATTGG 59.712 50.000 0.00 0.00 43.34 3.16
1495 5697 1.333619 GTGCTTATGCGGTACATTGGG 59.666 52.381 0.00 0.00 43.34 4.12
1496 5698 1.210722 TGCTTATGCGGTACATTGGGA 59.789 47.619 0.00 0.00 43.34 4.37
1497 5699 1.873591 GCTTATGCGGTACATTGGGAG 59.126 52.381 0.00 0.00 40.38 4.30
1498 5700 1.873591 CTTATGCGGTACATTGGGAGC 59.126 52.381 0.00 0.00 40.38 4.70
1499 5701 0.107831 TATGCGGTACATTGGGAGCC 59.892 55.000 0.00 0.00 40.38 4.70
1500 5702 1.920734 ATGCGGTACATTGGGAGCCA 61.921 55.000 0.00 0.00 34.40 4.75
1501 5703 1.819632 GCGGTACATTGGGAGCCAG 60.820 63.158 0.00 0.00 33.81 4.85
1502 5704 1.904771 CGGTACATTGGGAGCCAGA 59.095 57.895 0.00 0.00 33.81 3.86
1503 5705 0.469917 CGGTACATTGGGAGCCAGAT 59.530 55.000 0.00 0.00 33.81 2.90
1504 5706 1.541233 CGGTACATTGGGAGCCAGATC 60.541 57.143 0.00 0.00 33.81 2.75
1505 5707 1.490490 GGTACATTGGGAGCCAGATCA 59.510 52.381 0.00 0.00 33.81 2.92
1506 5708 2.565841 GTACATTGGGAGCCAGATCAC 58.434 52.381 0.00 0.00 33.81 3.06
1507 5709 1.293062 ACATTGGGAGCCAGATCACT 58.707 50.000 0.00 0.00 33.81 3.41
1508 5710 1.211457 ACATTGGGAGCCAGATCACTC 59.789 52.381 0.00 0.00 33.81 3.51
1509 5711 1.211212 CATTGGGAGCCAGATCACTCA 59.789 52.381 11.19 0.00 33.81 3.41
1510 5712 0.615331 TTGGGAGCCAGATCACTCAC 59.385 55.000 11.19 8.66 36.83 3.51
1511 5713 1.267574 TGGGAGCCAGATCACTCACC 61.268 60.000 9.41 9.30 35.35 4.02
1512 5714 0.980231 GGGAGCCAGATCACTCACCT 60.980 60.000 11.19 0.00 34.48 4.00
1513 5715 0.908198 GGAGCCAGATCACTCACCTT 59.092 55.000 11.19 0.00 34.48 3.50
1514 5716 1.134551 GGAGCCAGATCACTCACCTTC 60.135 57.143 11.19 0.00 34.48 3.46
1515 5717 1.552337 GAGCCAGATCACTCACCTTCA 59.448 52.381 0.00 0.00 32.98 3.02
1516 5718 1.980765 AGCCAGATCACTCACCTTCAA 59.019 47.619 0.00 0.00 0.00 2.69
1517 5719 2.027377 AGCCAGATCACTCACCTTCAAG 60.027 50.000 0.00 0.00 0.00 3.02
1518 5720 2.289945 GCCAGATCACTCACCTTCAAGT 60.290 50.000 0.00 0.00 0.00 3.16
1519 5721 3.055819 GCCAGATCACTCACCTTCAAGTA 60.056 47.826 0.00 0.00 0.00 2.24
1534 5736 7.868415 CACCTTCAAGTAAGTACCTATGCTATC 59.132 40.741 0.00 0.00 32.89 2.08
1591 5793 9.971922 ATCAGCTAATATTTTGTTATTTCCTGC 57.028 29.630 0.00 0.00 0.00 4.85
1691 5894 6.937436 TGCTATCTGTACAAGTCGAGAATA 57.063 37.500 0.00 0.00 0.00 1.75
1788 5991 1.135094 ATTGGGATCCAGATCACGCT 58.865 50.000 15.23 0.00 44.04 5.07
1905 6177 3.624861 GGCAAGCGTGTAGTAGTACTAGA 59.375 47.826 10.38 6.67 30.12 2.43
1911 6183 8.610896 CAAGCGTGTAGTAGTACTAGATAGTTT 58.389 37.037 10.38 9.02 37.73 2.66
1915 6187 8.274939 CGTGTAGTAGTACTAGATAGTTTGCTC 58.725 40.741 10.38 0.00 37.73 4.26
1923 6195 6.702716 ACTAGATAGTTTGCTCTGAGGTAC 57.297 41.667 6.83 0.00 31.13 3.34
1931 6203 0.796927 GCTCTGAGGTACGTTTTGCC 59.203 55.000 6.83 0.00 0.00 4.52
1940 6212 0.179078 TACGTTTTGCCCGTGTCAGT 60.179 50.000 0.00 0.00 39.22 3.41
1946 6218 1.464734 TTGCCCGTGTCAGTTTCAAA 58.535 45.000 0.00 0.00 0.00 2.69
1947 6219 1.021202 TGCCCGTGTCAGTTTCAAAG 58.979 50.000 0.00 0.00 0.00 2.77
1948 6220 1.305201 GCCCGTGTCAGTTTCAAAGA 58.695 50.000 0.00 0.00 0.00 2.52
1949 6221 1.880027 GCCCGTGTCAGTTTCAAAGAT 59.120 47.619 0.00 0.00 0.00 2.40
1950 6222 3.071479 GCCCGTGTCAGTTTCAAAGATA 58.929 45.455 0.00 0.00 0.00 1.98
2020 6292 3.911661 AGACGTGTCCAACACTAGTAC 57.088 47.619 0.00 0.00 46.46 2.73
2021 6293 3.216800 AGACGTGTCCAACACTAGTACA 58.783 45.455 0.00 0.00 46.46 2.90
2026 6298 4.614535 CGTGTCCAACACTAGTACACTACC 60.615 50.000 18.85 0.00 46.46 3.18
2048 6320 6.129874 ACCTGTGTCTATAGCTTGATGAGTA 58.870 40.000 0.00 0.00 0.00 2.59
2049 6321 6.607600 ACCTGTGTCTATAGCTTGATGAGTAA 59.392 38.462 0.00 0.00 0.00 2.24
2050 6322 6.920758 CCTGTGTCTATAGCTTGATGAGTAAC 59.079 42.308 0.00 0.00 0.00 2.50
2051 6323 7.404671 TGTGTCTATAGCTTGATGAGTAACA 57.595 36.000 0.00 0.00 0.00 2.41
2052 6324 7.258441 TGTGTCTATAGCTTGATGAGTAACAC 58.742 38.462 0.00 0.89 34.29 3.32
2055 6327 6.415280 GTCTATAGCTTGATGAGTAACACACG 59.585 42.308 0.00 0.00 0.00 4.49
2056 6328 3.386768 AGCTTGATGAGTAACACACGT 57.613 42.857 0.00 0.00 0.00 4.49
2057 6329 3.318017 AGCTTGATGAGTAACACACGTC 58.682 45.455 0.00 0.00 0.00 4.34
2059 6331 3.679980 GCTTGATGAGTAACACACGTCAT 59.320 43.478 0.00 0.00 35.30 3.06
2061 6333 2.993220 TGATGAGTAACACACGTCATGC 59.007 45.455 0.00 0.00 31.43 4.06
2062 6334 2.812358 TGAGTAACACACGTCATGCT 57.188 45.000 0.00 0.00 0.00 3.79
2063 6335 2.403259 TGAGTAACACACGTCATGCTG 58.597 47.619 0.00 0.00 0.00 4.41
2065 6337 2.135139 AGTAACACACGTCATGCTGTG 58.865 47.619 13.54 13.54 42.98 3.66
2066 6338 2.131972 GTAACACACGTCATGCTGTGA 58.868 47.619 19.79 0.00 40.28 3.58
2067 6339 1.220529 AACACACGTCATGCTGTGAG 58.779 50.000 19.79 15.32 40.28 3.51
2070 6342 0.676184 ACACGTCATGCTGTGAGACT 59.324 50.000 19.79 0.00 37.56 3.24
2071 6343 1.066136 CACGTCATGCTGTGAGACTG 58.934 55.000 10.57 0.00 37.56 3.51
2078 6398 2.070262 TGCTGTGAGACTGAATCGTG 57.930 50.000 0.00 0.00 0.00 4.35
2122 6452 9.981460 ATAAAGAGAAATTTTAGGGTGTGAGAT 57.019 29.630 0.00 0.00 0.00 2.75
2125 6455 7.234355 AGAGAAATTTTAGGGTGTGAGATGTT 58.766 34.615 0.00 0.00 0.00 2.71
2143 6473 2.093235 TGTTCCCTTGGCCAAAGTTTTG 60.093 45.455 20.91 6.39 37.90 2.44
2144 6474 1.872773 TCCCTTGGCCAAAGTTTTGT 58.127 45.000 20.91 0.00 36.45 2.83
2145 6475 1.484240 TCCCTTGGCCAAAGTTTTGTG 59.516 47.619 20.91 4.80 36.45 3.33
2146 6476 1.209261 CCCTTGGCCAAAGTTTTGTGT 59.791 47.619 20.91 0.00 36.45 3.72
2147 6477 2.278854 CCTTGGCCAAAGTTTTGTGTG 58.721 47.619 20.91 3.23 36.45 3.82
2148 6478 1.665169 CTTGGCCAAAGTTTTGTGTGC 59.335 47.619 20.91 0.92 36.45 4.57
2153 6489 1.917303 CCAAAGTTTTGTGTGCGTGTC 59.083 47.619 4.12 0.00 36.45 3.67
2179 6515 5.455201 GCGTGCAATTTTATTTGATCGATCA 59.545 36.000 23.99 23.99 34.44 2.92
2210 6546 5.473162 TGAAACCCAACAGAACTCATATGTG 59.527 40.000 1.90 2.63 0.00 3.21
2211 6547 4.640771 ACCCAACAGAACTCATATGTGT 57.359 40.909 4.59 4.59 0.00 3.72
2212 6548 4.326826 ACCCAACAGAACTCATATGTGTG 58.673 43.478 11.00 2.34 0.00 3.82
2214 6550 4.393062 CCCAACAGAACTCATATGTGTGTC 59.607 45.833 11.00 10.33 31.28 3.67
2216 6552 6.398095 CCAACAGAACTCATATGTGTGTCTA 58.602 40.000 11.00 0.00 31.28 2.59
2217 6553 7.044181 CCAACAGAACTCATATGTGTGTCTAT 58.956 38.462 11.00 3.86 31.28 1.98
2218 6554 8.197439 CCAACAGAACTCATATGTGTGTCTATA 58.803 37.037 11.00 0.00 31.28 1.31
2298 6634 4.422984 TGCCCCTTCAAGTAAGTACTAGT 58.577 43.478 0.00 0.00 34.99 2.57
2338 6674 5.405797 TGAGATTGTCTGAAGTCTGAATCG 58.594 41.667 0.00 0.00 0.00 3.34
2349 6686 5.126222 TGAAGTCTGAATCGTCTCATTAGCT 59.874 40.000 0.00 0.00 0.00 3.32
2354 6691 8.035394 AGTCTGAATCGTCTCATTAGCTTTTTA 58.965 33.333 0.00 0.00 0.00 1.52
2362 6699 7.606456 TCGTCTCATTAGCTTTTTATTTCCTGT 59.394 33.333 0.00 0.00 0.00 4.00
2372 6709 9.967346 AGCTTTTTATTTCCTGTAGAAGAAAAC 57.033 29.630 0.00 0.00 35.72 2.43
2373 6710 8.902735 GCTTTTTATTTCCTGTAGAAGAAAACG 58.097 33.333 0.00 0.00 35.72 3.60
2374 6711 9.394477 CTTTTTATTTCCTGTAGAAGAAAACGG 57.606 33.333 0.00 0.00 35.72 4.44
2375 6712 8.454570 TTTTATTTCCTGTAGAAGAAAACGGT 57.545 30.769 0.00 0.00 35.72 4.83
2376 6713 8.454570 TTTATTTCCTGTAGAAGAAAACGGTT 57.545 30.769 0.00 0.00 35.72 4.44
2377 6714 6.954487 ATTTCCTGTAGAAGAAAACGGTTT 57.046 33.333 0.00 0.00 35.72 3.27
2378 6715 5.996669 TTCCTGTAGAAGAAAACGGTTTC 57.003 39.130 18.30 18.30 43.05 2.78
2379 6716 4.053295 TCCTGTAGAAGAAAACGGTTTCG 58.947 43.478 19.67 4.19 46.56 3.46
2380 6717 3.185797 CCTGTAGAAGAAAACGGTTTCGG 59.814 47.826 19.67 9.54 46.56 4.30
2436 6773 4.575885 TCATGCACCTTCAAGTAAGTACC 58.424 43.478 0.00 0.00 32.89 3.34
2466 6816 4.022849 AGCTTTACCAAGTTGAGATTGTGC 60.023 41.667 3.87 0.31 31.86 4.57
2485 6835 2.037121 TGCGAAGTCTGAATCACCTCAA 59.963 45.455 0.00 0.00 0.00 3.02
2583 7642 9.075678 GCACCTTCAAGTAAGTACCTATATCTA 57.924 37.037 0.00 0.00 32.89 1.98
2675 8434 2.483877 TGCTGAAAGTTCTTATGCGGTG 59.516 45.455 0.00 0.00 35.30 4.94
2733 8492 8.363390 AGTACTTGTACTACCTTACCAAGTTTC 58.637 37.037 11.27 3.99 34.01 2.78
2749 8508 5.584649 CCAAGTTTCGAATATGGCAAGTCTA 59.415 40.000 0.00 0.00 0.00 2.59
2808 8567 2.159179 AGGGTTTTGGTGAAAGTGCT 57.841 45.000 0.00 0.00 0.00 4.40
2844 8603 2.106166 GGATCCAGATCATGCACCTTCT 59.894 50.000 6.95 0.00 39.54 2.85
2856 8615 7.949690 TCATGCACCTTCTAGTAAGTACTTA 57.050 36.000 11.38 11.38 37.73 2.24
2858 8617 8.414003 TCATGCACCTTCTAGTAAGTACTTATG 58.586 37.037 18.03 10.64 37.73 1.90
2860 8619 6.153851 TGCACCTTCTAGTAAGTACTTATGCA 59.846 38.462 22.85 22.85 37.73 3.96
2862 8621 7.711339 GCACCTTCTAGTAAGTACTTATGCAAT 59.289 37.037 18.03 0.04 37.73 3.56
2874 8633 8.494016 AGTACTTATGCAATCTTTACCAGTTC 57.506 34.615 0.00 0.00 0.00 3.01
2875 8634 8.100791 AGTACTTATGCAATCTTTACCAGTTCA 58.899 33.333 0.00 0.00 0.00 3.18
2876 8635 7.759489 ACTTATGCAATCTTTACCAGTTCAA 57.241 32.000 0.00 0.00 0.00 2.69
2877 8636 7.820648 ACTTATGCAATCTTTACCAGTTCAAG 58.179 34.615 0.00 0.00 0.00 3.02
2880 8639 6.258230 TGCAATCTTTACCAGTTCAAGATG 57.742 37.500 5.94 3.50 37.34 2.90
2881 8640 6.003326 TGCAATCTTTACCAGTTCAAGATGA 58.997 36.000 5.94 0.00 37.34 2.92
2882 8641 6.660521 TGCAATCTTTACCAGTTCAAGATGAT 59.339 34.615 5.94 0.00 37.34 2.45
2884 8643 7.362401 GCAATCTTTACCAGTTCAAGATGATGT 60.362 37.037 5.94 0.00 37.34 3.06
2885 8644 7.856145 ATCTTTACCAGTTCAAGATGATGTC 57.144 36.000 4.81 0.00 36.18 3.06
2886 8645 6.768483 TCTTTACCAGTTCAAGATGATGTCA 58.232 36.000 0.00 0.00 0.00 3.58
2887 8646 7.223584 TCTTTACCAGTTCAAGATGATGTCAA 58.776 34.615 0.00 0.00 0.00 3.18
2889 8648 8.408043 TTTACCAGTTCAAGATGATGTCAATT 57.592 30.769 0.00 0.00 0.00 2.32
2890 8649 6.263516 ACCAGTTCAAGATGATGTCAATTG 57.736 37.500 0.00 0.00 0.00 2.32
2891 8650 5.771666 ACCAGTTCAAGATGATGTCAATTGT 59.228 36.000 5.13 0.00 32.09 2.71
2892 8651 6.090783 CCAGTTCAAGATGATGTCAATTGTG 58.909 40.000 5.13 0.00 32.09 3.33
2894 8653 7.364970 CAGTTCAAGATGATGTCAATTGTGAA 58.635 34.615 5.13 2.03 34.87 3.18
2895 8654 8.027189 CAGTTCAAGATGATGTCAATTGTGAAT 58.973 33.333 5.13 0.00 34.87 2.57
2896 8655 8.242053 AGTTCAAGATGATGTCAATTGTGAATC 58.758 33.333 5.13 7.85 34.87 2.52
2897 8656 7.092137 TCAAGATGATGTCAATTGTGAATCC 57.908 36.000 5.13 0.00 34.87 3.01
2899 8658 6.446781 AGATGATGTCAATTGTGAATCCAC 57.553 37.500 5.13 0.00 43.46 4.02
2900 8659 6.185511 AGATGATGTCAATTGTGAATCCACT 58.814 36.000 5.13 6.65 43.55 4.00
2901 8660 5.885230 TGATGTCAATTGTGAATCCACTC 57.115 39.130 5.13 0.00 43.55 3.51
2902 8661 5.315348 TGATGTCAATTGTGAATCCACTCA 58.685 37.500 5.13 0.00 43.55 3.41
2903 8662 5.947566 TGATGTCAATTGTGAATCCACTCAT 59.052 36.000 5.13 0.00 43.55 2.90
2904 8663 5.632244 TGTCAATTGTGAATCCACTCATG 57.368 39.130 5.13 0.00 43.55 3.07
2905 8664 4.460034 TGTCAATTGTGAATCCACTCATGG 59.540 41.667 5.13 0.00 43.55 3.66
2907 8666 5.047802 GTCAATTGTGAATCCACTCATGGTT 60.048 40.000 5.13 0.00 43.55 3.67
2909 8668 7.309133 GTCAATTGTGAATCCACTCATGGTTTA 60.309 37.037 5.13 0.00 43.55 2.01
2941 8702 5.596845 TGTAGAAGAAAATGGTTTTGGTGC 58.403 37.500 0.00 0.00 31.94 5.01
2942 8703 4.751767 AGAAGAAAATGGTTTTGGTGCA 57.248 36.364 0.00 0.00 31.94 4.57
2943 8704 5.096443 AGAAGAAAATGGTTTTGGTGCAA 57.904 34.783 0.00 0.00 31.94 4.08
2944 8705 5.118286 AGAAGAAAATGGTTTTGGTGCAAG 58.882 37.500 0.00 0.00 31.94 4.01
2945 8706 4.486125 AGAAAATGGTTTTGGTGCAAGT 57.514 36.364 0.00 0.00 31.94 3.16
2946 8707 4.190772 AGAAAATGGTTTTGGTGCAAGTG 58.809 39.130 0.00 0.00 31.94 3.16
2947 8708 1.952193 AATGGTTTTGGTGCAAGTGC 58.048 45.000 0.00 0.00 42.50 4.40
2948 8709 0.249405 ATGGTTTTGGTGCAAGTGCG 60.249 50.000 0.00 0.00 45.83 5.34
2949 8710 1.140804 GGTTTTGGTGCAAGTGCGT 59.859 52.632 0.00 0.00 45.83 5.24
2950 8711 0.382515 GGTTTTGGTGCAAGTGCGTA 59.617 50.000 0.00 0.00 45.83 4.42
2951 8712 1.000717 GGTTTTGGTGCAAGTGCGTAT 60.001 47.619 0.00 0.00 45.83 3.06
2952 8713 2.050691 GTTTTGGTGCAAGTGCGTATG 58.949 47.619 0.00 0.00 45.83 2.39
2953 8714 0.039617 TTTGGTGCAAGTGCGTATGC 60.040 50.000 0.00 0.00 45.83 3.14
2964 8725 1.938861 GCGTATGCGGTACATTGGG 59.061 57.895 5.09 0.00 40.38 4.12
2965 8726 0.531090 GCGTATGCGGTACATTGGGA 60.531 55.000 5.09 0.00 40.38 4.37
2966 8727 1.876416 GCGTATGCGGTACATTGGGAT 60.876 52.381 5.09 0.00 40.38 3.85
2967 8728 2.066262 CGTATGCGGTACATTGGGATC 58.934 52.381 0.00 0.00 40.38 3.36
2968 8729 2.423577 GTATGCGGTACATTGGGATCC 58.576 52.381 1.92 1.92 40.38 3.36
2969 8730 0.843309 ATGCGGTACATTGGGATCCA 59.157 50.000 15.23 0.00 34.40 3.41
2970 8731 0.180171 TGCGGTACATTGGGATCCAG 59.820 55.000 15.23 2.55 33.81 3.86
2971 8732 0.468226 GCGGTACATTGGGATCCAGA 59.532 55.000 15.23 0.76 33.81 3.86
2972 8733 1.072331 GCGGTACATTGGGATCCAGAT 59.928 52.381 15.23 3.50 33.81 2.90
2973 8734 2.872038 GCGGTACATTGGGATCCAGATC 60.872 54.545 15.23 0.00 33.81 2.75
2974 8735 2.368548 CGGTACATTGGGATCCAGATCA 59.631 50.000 15.23 0.00 39.54 2.92
2975 8736 3.744660 GGTACATTGGGATCCAGATCAC 58.255 50.000 15.23 6.47 41.53 3.06
2980 8741 0.911769 TGGGATCCAGATCACACACC 59.088 55.000 15.23 1.29 45.55 4.16
2981 8742 1.207791 GGGATCCAGATCACACACCT 58.792 55.000 15.23 0.00 40.86 4.00
2982 8743 1.561542 GGGATCCAGATCACACACCTT 59.438 52.381 15.23 0.00 40.86 3.50
2983 8744 2.420687 GGGATCCAGATCACACACCTTC 60.421 54.545 15.23 0.00 40.86 3.46
2984 8745 2.237143 GGATCCAGATCACACACCTTCA 59.763 50.000 6.95 0.00 39.54 3.02
2985 8746 3.307691 GGATCCAGATCACACACCTTCAA 60.308 47.826 6.95 0.00 39.54 2.69
2986 8747 3.407424 TCCAGATCACACACCTTCAAG 57.593 47.619 0.00 0.00 0.00 3.02
2987 8748 2.705658 TCCAGATCACACACCTTCAAGT 59.294 45.455 0.00 0.00 0.00 3.16
2988 8749 3.901222 TCCAGATCACACACCTTCAAGTA 59.099 43.478 0.00 0.00 0.00 2.24
2989 8750 4.346709 TCCAGATCACACACCTTCAAGTAA 59.653 41.667 0.00 0.00 0.00 2.24
2990 8751 4.692625 CCAGATCACACACCTTCAAGTAAG 59.307 45.833 0.00 0.00 34.73 2.34
2991 8752 5.300752 CAGATCACACACCTTCAAGTAAGT 58.699 41.667 0.00 0.00 32.89 2.24
2992 8753 6.455647 CAGATCACACACCTTCAAGTAAGTA 58.544 40.000 0.00 0.00 32.89 2.24
2993 8754 6.366332 CAGATCACACACCTTCAAGTAAGTAC 59.634 42.308 0.00 0.00 32.89 2.73
2994 8755 4.952460 TCACACACCTTCAAGTAAGTACC 58.048 43.478 0.00 0.00 32.89 3.34
2995 8756 4.652421 TCACACACCTTCAAGTAAGTACCT 59.348 41.667 0.00 0.00 32.89 3.08
2996 8757 5.834742 TCACACACCTTCAAGTAAGTACCTA 59.165 40.000 0.00 0.00 32.89 3.08
2997 8758 6.495872 TCACACACCTTCAAGTAAGTACCTAT 59.504 38.462 0.00 0.00 32.89 2.57
2998 8759 6.590292 CACACACCTTCAAGTAAGTACCTATG 59.410 42.308 0.00 0.00 32.89 2.23
2999 8760 5.581085 CACACCTTCAAGTAAGTACCTATGC 59.419 44.000 0.00 0.00 32.89 3.14
3000 8761 5.484290 ACACCTTCAAGTAAGTACCTATGCT 59.516 40.000 0.00 0.00 32.89 3.79
3001 8762 6.666546 ACACCTTCAAGTAAGTACCTATGCTA 59.333 38.462 0.00 0.00 32.89 3.49
3002 8763 7.344871 ACACCTTCAAGTAAGTACCTATGCTAT 59.655 37.037 0.00 0.00 32.89 2.97
3003 8764 7.868415 CACCTTCAAGTAAGTACCTATGCTATC 59.132 40.741 0.00 0.00 32.89 2.08
3004 8765 7.785506 ACCTTCAAGTAAGTACCTATGCTATCT 59.214 37.037 0.00 0.00 32.89 1.98
3005 8766 8.085296 CCTTCAAGTAAGTACCTATGCTATCTG 58.915 40.741 0.00 0.00 32.89 2.90
3006 8767 8.762481 TTCAAGTAAGTACCTATGCTATCTGA 57.238 34.615 0.00 0.00 0.00 3.27
3007 8768 8.762481 TCAAGTAAGTACCTATGCTATCTGAA 57.238 34.615 0.00 0.00 0.00 3.02
3008 8769 8.630917 TCAAGTAAGTACCTATGCTATCTGAAC 58.369 37.037 0.00 0.00 0.00 3.18
3009 8770 7.527568 AGTAAGTACCTATGCTATCTGAACC 57.472 40.000 0.00 0.00 0.00 3.62
3010 8771 7.067421 AGTAAGTACCTATGCTATCTGAACCA 58.933 38.462 0.00 0.00 0.00 3.67
3011 8772 6.808321 AAGTACCTATGCTATCTGAACCAA 57.192 37.500 0.00 0.00 0.00 3.67
3012 8773 6.412362 AGTACCTATGCTATCTGAACCAAG 57.588 41.667 0.00 0.00 0.00 3.61
3013 8774 5.900123 AGTACCTATGCTATCTGAACCAAGT 59.100 40.000 0.00 0.00 0.00 3.16
3014 8775 5.283457 ACCTATGCTATCTGAACCAAGTC 57.717 43.478 0.00 0.00 0.00 3.01
3015 8776 4.202161 ACCTATGCTATCTGAACCAAGTCG 60.202 45.833 0.00 0.00 0.00 4.18
3016 8777 2.010145 TGCTATCTGAACCAAGTCGC 57.990 50.000 0.00 0.00 0.00 5.19
3017 8778 1.275010 TGCTATCTGAACCAAGTCGCA 59.725 47.619 0.00 0.00 0.00 5.10
3018 8779 2.289382 TGCTATCTGAACCAAGTCGCAA 60.289 45.455 0.00 0.00 0.00 4.85
3019 8780 2.742053 GCTATCTGAACCAAGTCGCAAA 59.258 45.455 0.00 0.00 0.00 3.68
3020 8781 3.375299 GCTATCTGAACCAAGTCGCAAAT 59.625 43.478 0.00 0.00 0.00 2.32
3021 8782 4.142600 GCTATCTGAACCAAGTCGCAAATT 60.143 41.667 0.00 0.00 0.00 1.82
3022 8783 4.853924 ATCTGAACCAAGTCGCAAATTT 57.146 36.364 0.00 0.00 0.00 1.82
3023 8784 3.963665 TCTGAACCAAGTCGCAAATTTG 58.036 40.909 14.03 14.03 0.00 2.32
3024 8785 3.380004 TCTGAACCAAGTCGCAAATTTGT 59.620 39.130 19.03 0.00 0.00 2.83
3025 8786 4.111916 CTGAACCAAGTCGCAAATTTGTT 58.888 39.130 19.03 3.17 0.00 2.83
3026 8787 5.066634 TCTGAACCAAGTCGCAAATTTGTTA 59.933 36.000 19.03 5.38 0.00 2.41
3027 8788 5.651530 TGAACCAAGTCGCAAATTTGTTAA 58.348 33.333 19.03 2.97 0.00 2.01
3028 8789 6.276847 TGAACCAAGTCGCAAATTTGTTAAT 58.723 32.000 19.03 4.74 0.00 1.40
3029 8790 6.758886 TGAACCAAGTCGCAAATTTGTTAATT 59.241 30.769 19.03 10.18 35.49 1.40
3030 8791 6.523676 ACCAAGTCGCAAATTTGTTAATTG 57.476 33.333 19.03 19.22 34.27 2.32
3031 8792 6.045955 ACCAAGTCGCAAATTTGTTAATTGT 58.954 32.000 19.03 10.45 34.27 2.71
3032 8793 6.019156 ACCAAGTCGCAAATTTGTTAATTGTG 60.019 34.615 19.03 15.94 34.27 3.33
3033 8794 6.199908 CCAAGTCGCAAATTTGTTAATTGTGA 59.800 34.615 19.03 1.80 34.27 3.58
3034 8795 7.254252 CCAAGTCGCAAATTTGTTAATTGTGAA 60.254 33.333 19.03 0.00 34.27 3.18
3035 8796 7.945033 AGTCGCAAATTTGTTAATTGTGAAT 57.055 28.000 19.03 1.21 34.27 2.57
3036 8797 8.006741 AGTCGCAAATTTGTTAATTGTGAATC 57.993 30.769 19.03 0.00 34.27 2.52
3037 8798 7.651304 AGTCGCAAATTTGTTAATTGTGAATCA 59.349 29.630 19.03 0.00 34.27 2.57
3038 8799 8.272176 GTCGCAAATTTGTTAATTGTGAATCAA 58.728 29.630 19.03 0.00 40.53 2.57
3065 8826 9.897744 TTCATAGTTTGTTATTTTCTGCAGAAG 57.102 29.630 27.02 11.88 35.21 2.85
3066 8827 9.283768 TCATAGTTTGTTATTTTCTGCAGAAGA 57.716 29.630 27.02 23.88 35.21 2.87
3067 8828 9.897744 CATAGTTTGTTATTTTCTGCAGAAGAA 57.102 29.630 27.02 22.58 43.37 2.52
3079 8840 4.405358 TCTGCAGAAGAAAATGGTTTTGGT 59.595 37.500 15.67 0.00 31.94 3.67
3115 9021 3.744660 GGTACATTGGGATCCAGATCAC 58.255 50.000 15.23 6.47 41.53 3.06
3116 9022 3.392616 GGTACATTGGGATCCAGATCACT 59.607 47.826 15.23 0.00 41.71 3.41
3239 9147 3.492482 GGTTTTGGTGCAAGTGCTTATGT 60.492 43.478 4.69 0.00 42.66 2.29
3280 9188 6.493802 AGATCACTCACCTTCAAGTAAGTACA 59.506 38.462 0.00 0.00 32.89 2.90
3332 9240 8.367911 AGTGTTAGTTGTGAATGAACTCATAGA 58.632 33.333 0.00 0.00 35.10 1.98
3393 9301 4.431416 TCTTATGCGGTACATTGGGATT 57.569 40.909 0.00 0.00 40.38 3.01
3422 9330 6.062749 TCATGCTCCTTCTCGTAAGTACTAT 58.937 40.000 0.00 0.00 39.48 2.12
3424 9332 6.132791 TGCTCCTTCTCGTAAGTACTATTG 57.867 41.667 0.00 0.00 39.48 1.90
3432 9340 8.442632 TTCTCGTAAGTACTATTGCTAGCTTA 57.557 34.615 17.23 7.01 39.48 3.09
3483 9391 6.932356 ATCACCTCATGTAGCTTGTTATTG 57.068 37.500 0.00 0.00 0.00 1.90
3485 9393 4.637534 CACCTCATGTAGCTTGTTATTGCT 59.362 41.667 0.00 0.00 42.67 3.91
3580 9489 6.785337 AGTACCATGCTATGTGTACAACTA 57.215 37.500 0.00 0.00 38.38 2.24
3593 9502 6.697395 TGTGTACAACTAGAGCATGTGTTAT 58.303 36.000 0.00 0.00 0.00 1.89
3597 9506 6.500684 ACAACTAGAGCATGTGTTATTTGG 57.499 37.500 0.00 0.00 0.00 3.28
3606 9515 5.245751 AGCATGTGTTATTTGGGAATCAACA 59.754 36.000 0.00 0.00 34.67 3.33
3663 9585 1.539827 GGTGAAAGTGCTTATGCGGTT 59.460 47.619 0.00 0.00 43.34 4.44
3717 9639 8.591072 AGTAAGTACTTGTGCTACCTTATCAAA 58.409 33.333 18.56 0.00 31.13 2.69
3724 9646 5.398169 TGTGCTACCTTATCAAATTTTGCG 58.602 37.500 4.19 0.00 0.00 4.85
3780 9702 7.769044 TGTGTTATTTCCTATAGAAGACAAGGC 59.231 37.037 0.00 0.00 35.40 4.35
3982 10449 3.133901 TCACTCACCTTCAAGTAAGTGCA 59.866 43.478 6.30 0.00 35.30 4.57
3996 10463 9.830975 TCAAGTAAGTGCATATGCTATCTTAAA 57.169 29.630 27.13 12.28 42.66 1.52
4001 10468 6.963796 AGTGCATATGCTATCTTAAACAAGC 58.036 36.000 27.13 0.00 42.66 4.01
4026 10501 6.345723 CCGCAAAAATGTTAGTTGTGAATCAC 60.346 38.462 6.41 6.41 35.29 3.06
4066 10671 5.850557 TCTGCAGAAGAAAATGGTTTTGA 57.149 34.783 15.67 0.00 31.94 2.69
4127 11280 3.565482 CACCTTCAAGTAAGCACATGTGT 59.435 43.478 26.01 10.78 33.49 3.72
4144 11297 6.487331 CACATGTGTTACCCTTACCAAACTTA 59.513 38.462 18.03 0.00 0.00 2.24
4170 11323 7.665561 TTAATGTGTTCGAACTGAATCATCA 57.334 32.000 27.32 13.62 39.21 3.07
4174 11327 4.211164 GTGTTCGAACTGAATCATCACACA 59.789 41.667 27.32 1.17 39.21 3.72
4175 11328 4.448732 TGTTCGAACTGAATCATCACACAG 59.551 41.667 27.32 0.00 39.21 3.66
4211 11364 8.607713 TCCTAGAAAATGGTTTTGGTGATAGTA 58.392 33.333 0.00 0.00 31.94 1.82
4256 11409 5.707298 CCAGACCATGAACATTCAAGTAAGT 59.293 40.000 0.00 0.00 41.13 2.24
4260 11413 8.157476 AGACCATGAACATTCAAGTAAGTACTT 58.843 33.333 13.68 13.68 46.76 2.24
4286 11439 5.448632 CGCTACCTAACCAATTTTAGCAAGG 60.449 44.000 0.00 0.00 33.07 3.61
4311 11464 1.559682 AGGCCGGATAAAAGCTCTTGA 59.440 47.619 5.05 0.00 0.00 3.02
4313 11488 2.952310 GGCCGGATAAAAGCTCTTGATT 59.048 45.455 5.05 0.00 0.00 2.57
4318 11493 5.801947 CCGGATAAAAGCTCTTGATTTGTTG 59.198 40.000 0.00 0.00 31.63 3.33
4525 11728 4.576053 CACCAAAGTCTGTCAATTCTGTCA 59.424 41.667 0.00 0.00 0.00 3.58
4526 11729 5.066375 CACCAAAGTCTGTCAATTCTGTCAA 59.934 40.000 0.00 0.00 0.00 3.18
4608 11811 0.962356 CGATGAAGGCCAAGCAGGTT 60.962 55.000 5.01 0.00 40.61 3.50
4705 11908 1.064758 TGGCCAGATTCGCTACCAAAT 60.065 47.619 0.00 0.00 31.13 2.32
5080 12288 5.070770 TGTAAAGTTCCGGCTAAACGATA 57.929 39.130 0.00 0.00 35.47 2.92
5385 12612 4.275662 CAAATGCAGTCGACGTGTTTTTA 58.724 39.130 10.46 0.00 0.00 1.52
5476 12703 1.152881 GGGGTGATCATGTCCAGCC 60.153 63.158 21.56 21.56 46.91 4.85
5483 12710 0.405198 ATCATGTCCAGCCACCAACA 59.595 50.000 0.00 0.00 0.00 3.33
5723 12962 2.018515 CTCTACCTCACCGAGACTTCC 58.981 57.143 0.00 0.00 0.00 3.46
5724 12963 1.353358 TCTACCTCACCGAGACTTCCA 59.647 52.381 0.00 0.00 0.00 3.53
5761 13000 8.413229 CCTGTTTGTAAAATTCTCCTTTTCTGA 58.587 33.333 0.00 0.00 31.15 3.27
5778 13017 5.925506 TTCTGAAGGTATAATGGACGACA 57.074 39.130 0.00 0.00 0.00 4.35
5781 13020 4.426416 TGAAGGTATAATGGACGACAACG 58.574 43.478 0.00 0.00 45.75 4.10
5784 13023 4.868067 AGGTATAATGGACGACAACGATC 58.132 43.478 0.00 0.00 42.66 3.69
5810 13051 7.332557 TGTATTGTATACGACTGAAATGGGTT 58.667 34.615 0.00 0.00 0.00 4.11
5851 13092 7.621428 AAACAGAGATTCATGTTATCACAGG 57.379 36.000 7.46 0.00 38.66 4.00
5853 13094 6.344500 ACAGAGATTCATGTTATCACAGGTC 58.656 40.000 11.36 2.78 36.07 3.85
6003 13680 5.766670 TGCTCTATTTGATGACAATCCATCC 59.233 40.000 0.00 0.00 41.60 3.51
6008 13685 4.868172 TTGATGACAATCCATCCTTCCT 57.132 40.909 0.00 0.00 41.60 3.36
6009 13686 4.428294 TGATGACAATCCATCCTTCCTC 57.572 45.455 0.00 0.00 41.60 3.71
6022 13699 4.627284 TCCTTCCTCGGTTTTTATCACA 57.373 40.909 0.00 0.00 0.00 3.58
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
226 227 8.853077 TCTGTCTAAGATTTGTCATCATTGTT 57.147 30.769 0.00 0.00 0.00 2.83
369 3500 7.916977 ACGCACGTCTCAACTAAAATACATATA 59.083 33.333 0.00 0.00 0.00 0.86
401 3532 5.682943 TGAACCAACTAGTAAATGTGCAC 57.317 39.130 10.75 10.75 0.00 4.57
402 3533 6.701145 TTTGAACCAACTAGTAAATGTGCA 57.299 33.333 0.00 0.00 0.00 4.57
403 3534 7.422399 TCTTTTGAACCAACTAGTAAATGTGC 58.578 34.615 0.00 0.00 0.00 4.57
404 3535 9.796120 TTTCTTTTGAACCAACTAGTAAATGTG 57.204 29.630 0.00 0.00 38.30 3.21
432 3563 1.774110 TGCCCTTGAATGTGTGTGTT 58.226 45.000 0.00 0.00 0.00 3.32
456 3587 5.618236 GGGAATTAACCATCACTACCTACC 58.382 45.833 0.00 0.00 0.00 3.18
800 4113 4.833478 AGCTGGAATAATATCTCGCCAT 57.167 40.909 0.00 0.00 0.00 4.40
903 4223 1.394618 AAAGCGGTGGTAGCAAACAA 58.605 45.000 0.00 0.00 37.01 2.83
904 4224 1.394618 AAAAGCGGTGGTAGCAAACA 58.605 45.000 0.00 0.00 37.01 2.83
943 4265 2.367241 GAGGAAGAAGGGATGGTCTAGC 59.633 54.545 0.00 0.00 0.00 3.42
1003 4325 0.321298 ATTGCCGTAAGCTTGGTCGT 60.321 50.000 9.86 0.00 44.23 4.34
1234 4693 3.428532 AGGTAGCTCAAGTCGTCCTTAA 58.571 45.455 0.00 0.00 0.00 1.85
1235 4694 3.083122 AGGTAGCTCAAGTCGTCCTTA 57.917 47.619 0.00 0.00 0.00 2.69
1236 4695 1.926108 AGGTAGCTCAAGTCGTCCTT 58.074 50.000 0.00 0.00 0.00 3.36
1237 4696 1.926108 AAGGTAGCTCAAGTCGTCCT 58.074 50.000 0.00 0.00 0.00 3.85
1382 5584 0.740868 TGATAAGGCAGCACGAGCAC 60.741 55.000 7.77 0.00 45.49 4.40
1383 5585 0.036483 TTGATAAGGCAGCACGAGCA 60.036 50.000 7.77 0.00 45.49 4.26
1384 5586 0.654683 CTTGATAAGGCAGCACGAGC 59.345 55.000 0.00 0.00 42.56 5.03
1385 5587 2.015736 ACTTGATAAGGCAGCACGAG 57.984 50.000 0.00 0.00 0.00 4.18
1386 5588 2.076100 CAACTTGATAAGGCAGCACGA 58.924 47.619 0.00 0.00 0.00 4.35
1387 5589 2.076100 TCAACTTGATAAGGCAGCACG 58.924 47.619 0.00 0.00 0.00 5.34
1388 5590 2.813754 TGTCAACTTGATAAGGCAGCAC 59.186 45.455 0.00 0.00 0.00 4.40
1389 5591 3.138884 TGTCAACTTGATAAGGCAGCA 57.861 42.857 0.00 0.00 0.00 4.41
1390 5592 4.082571 ACATTGTCAACTTGATAAGGCAGC 60.083 41.667 11.48 0.00 33.56 5.25
1391 5593 5.633830 ACATTGTCAACTTGATAAGGCAG 57.366 39.130 11.48 3.33 33.56 4.85
1392 5594 4.154015 CGACATTGTCAACTTGATAAGGCA 59.846 41.667 16.61 0.00 33.56 4.75
1393 5595 4.154195 ACGACATTGTCAACTTGATAAGGC 59.846 41.667 16.61 5.51 33.56 4.35
1394 5596 5.862924 ACGACATTGTCAACTTGATAAGG 57.137 39.130 16.61 10.34 35.80 2.69
1395 5597 7.963981 ACATACGACATTGTCAACTTGATAAG 58.036 34.615 16.61 0.00 31.15 1.73
1396 5598 7.817478 AGACATACGACATTGTCAACTTGATAA 59.183 33.333 16.61 3.69 43.72 1.75
1397 5599 7.275560 CAGACATACGACATTGTCAACTTGATA 59.724 37.037 16.61 0.00 43.72 2.15
1398 5600 6.091305 CAGACATACGACATTGTCAACTTGAT 59.909 38.462 16.61 0.00 43.72 2.57
1399 5601 5.405269 CAGACATACGACATTGTCAACTTGA 59.595 40.000 16.61 0.00 43.72 3.02
1400 5602 5.405269 TCAGACATACGACATTGTCAACTTG 59.595 40.000 16.61 10.09 43.72 3.16
1401 5603 5.538118 TCAGACATACGACATTGTCAACTT 58.462 37.500 16.61 0.82 43.72 2.66
1402 5604 5.134202 TCAGACATACGACATTGTCAACT 57.866 39.130 16.61 1.37 43.72 3.16
1403 5605 5.839262 TTCAGACATACGACATTGTCAAC 57.161 39.130 16.61 1.78 43.72 3.18
1404 5606 6.162777 TGATTCAGACATACGACATTGTCAA 58.837 36.000 16.61 4.62 43.72 3.18
1405 5607 5.719173 TGATTCAGACATACGACATTGTCA 58.281 37.500 16.61 0.00 43.72 3.58
1406 5608 6.699204 AGATGATTCAGACATACGACATTGTC 59.301 38.462 6.73 6.73 42.03 3.18
1407 5609 6.577103 AGATGATTCAGACATACGACATTGT 58.423 36.000 0.00 0.00 0.00 2.71
1408 5610 6.698766 TGAGATGATTCAGACATACGACATTG 59.301 38.462 0.00 0.00 0.00 2.82
1409 5611 6.809869 TGAGATGATTCAGACATACGACATT 58.190 36.000 0.00 0.00 0.00 2.71
1410 5612 6.396829 TGAGATGATTCAGACATACGACAT 57.603 37.500 0.00 0.00 0.00 3.06
1411 5613 5.835113 TGAGATGATTCAGACATACGACA 57.165 39.130 0.00 0.00 0.00 4.35
1412 5614 7.536964 CACTATGAGATGATTCAGACATACGAC 59.463 40.741 0.00 0.00 0.00 4.34
1413 5615 7.229506 ACACTATGAGATGATTCAGACATACGA 59.770 37.037 0.00 0.00 0.00 3.43
1414 5616 7.325579 CACACTATGAGATGATTCAGACATACG 59.674 40.741 0.00 0.00 0.00 3.06
1415 5617 8.140628 ACACACTATGAGATGATTCAGACATAC 58.859 37.037 0.00 0.00 0.00 2.39
1416 5618 8.242729 ACACACTATGAGATGATTCAGACATA 57.757 34.615 0.00 2.21 0.00 2.29
1417 5619 7.122138 ACACACTATGAGATGATTCAGACAT 57.878 36.000 0.00 1.18 0.00 3.06
1418 5620 6.535963 ACACACTATGAGATGATTCAGACA 57.464 37.500 0.00 0.00 0.00 3.41
1419 5621 9.539825 AATAACACACTATGAGATGATTCAGAC 57.460 33.333 0.00 0.00 0.00 3.51
1422 5624 9.330063 GGAAATAACACACTATGAGATGATTCA 57.670 33.333 0.00 0.00 0.00 2.57
1423 5625 9.553064 AGGAAATAACACACTATGAGATGATTC 57.447 33.333 0.00 0.00 0.00 2.52
1436 5638 9.968743 CGTTTTCTTCTATAGGAAATAACACAC 57.031 33.333 0.00 0.00 33.90 3.82
1437 5639 9.158233 CCGTTTTCTTCTATAGGAAATAACACA 57.842 33.333 0.00 0.00 33.90 3.72
1438 5640 9.159364 ACCGTTTTCTTCTATAGGAAATAACAC 57.841 33.333 0.00 0.00 33.90 3.32
1439 5641 9.729281 AACCGTTTTCTTCTATAGGAAATAACA 57.271 29.630 0.00 0.00 33.90 2.41
1443 5645 8.520351 CCAAAACCGTTTTCTTCTATAGGAAAT 58.480 33.333 6.26 0.00 33.90 2.17
1444 5646 7.503230 ACCAAAACCGTTTTCTTCTATAGGAAA 59.497 33.333 6.26 0.21 33.07 3.13
1445 5647 6.999871 ACCAAAACCGTTTTCTTCTATAGGAA 59.000 34.615 6.26 0.00 0.00 3.36
1446 5648 6.428771 CACCAAAACCGTTTTCTTCTATAGGA 59.571 38.462 6.26 0.00 0.00 2.94
1447 5649 6.608610 CACCAAAACCGTTTTCTTCTATAGG 58.391 40.000 6.26 5.33 0.00 2.57
1448 5650 6.084277 GCACCAAAACCGTTTTCTTCTATAG 58.916 40.000 6.26 0.00 0.00 1.31
1449 5651 5.334260 CGCACCAAAACCGTTTTCTTCTATA 60.334 40.000 6.26 0.00 0.00 1.31
1450 5652 4.555906 CGCACCAAAACCGTTTTCTTCTAT 60.556 41.667 6.26 0.00 0.00 1.98
1451 5653 3.242804 CGCACCAAAACCGTTTTCTTCTA 60.243 43.478 6.26 0.00 0.00 2.10
1452 5654 2.478879 CGCACCAAAACCGTTTTCTTCT 60.479 45.455 6.26 0.00 0.00 2.85
1453 5655 1.849829 CGCACCAAAACCGTTTTCTTC 59.150 47.619 6.26 0.00 0.00 2.87
1454 5656 1.473278 TCGCACCAAAACCGTTTTCTT 59.527 42.857 6.26 0.00 0.00 2.52
1455 5657 1.064952 CTCGCACCAAAACCGTTTTCT 59.935 47.619 6.26 0.00 0.00 2.52
1456 5658 1.202211 ACTCGCACCAAAACCGTTTTC 60.202 47.619 6.26 0.00 0.00 2.29
1457 5659 0.812549 ACTCGCACCAAAACCGTTTT 59.187 45.000 3.29 3.29 0.00 2.43
1458 5660 0.099791 CACTCGCACCAAAACCGTTT 59.900 50.000 0.00 0.00 0.00 3.60
1459 5661 1.725066 CACTCGCACCAAAACCGTT 59.275 52.632 0.00 0.00 0.00 4.44
1460 5662 2.830285 GCACTCGCACCAAAACCGT 61.830 57.895 0.00 0.00 38.36 4.83
1461 5663 2.051345 GCACTCGCACCAAAACCG 60.051 61.111 0.00 0.00 38.36 4.44
1462 5664 0.948678 TAAGCACTCGCACCAAAACC 59.051 50.000 0.00 0.00 42.27 3.27
1463 5665 2.584791 CATAAGCACTCGCACCAAAAC 58.415 47.619 0.00 0.00 42.27 2.43
1464 5666 1.068610 GCATAAGCACTCGCACCAAAA 60.069 47.619 0.00 0.00 42.27 2.44
1465 5667 0.521291 GCATAAGCACTCGCACCAAA 59.479 50.000 0.00 0.00 42.27 3.28
1466 5668 1.634757 CGCATAAGCACTCGCACCAA 61.635 55.000 0.00 0.00 42.27 3.67
1467 5669 2.100031 CGCATAAGCACTCGCACCA 61.100 57.895 0.00 0.00 42.27 4.17
1468 5670 2.703409 CGCATAAGCACTCGCACC 59.297 61.111 0.00 0.00 42.27 5.01
1469 5671 0.804544 TACCGCATAAGCACTCGCAC 60.805 55.000 0.00 0.00 42.27 5.34
1470 5672 0.804544 GTACCGCATAAGCACTCGCA 60.805 55.000 0.00 0.00 42.27 5.10
1471 5673 0.804544 TGTACCGCATAAGCACTCGC 60.805 55.000 0.00 0.00 42.27 5.03
1472 5674 1.852942 ATGTACCGCATAAGCACTCG 58.147 50.000 0.00 0.00 42.27 4.18
1473 5675 2.287915 CCAATGTACCGCATAAGCACTC 59.712 50.000 0.00 0.00 42.27 3.51
1474 5676 2.288666 CCAATGTACCGCATAAGCACT 58.711 47.619 0.00 0.00 42.27 4.40
1475 5677 1.333619 CCCAATGTACCGCATAAGCAC 59.666 52.381 0.00 0.00 42.27 4.40
1476 5678 1.210722 TCCCAATGTACCGCATAAGCA 59.789 47.619 0.00 0.00 42.27 3.91
1477 5679 1.873591 CTCCCAATGTACCGCATAAGC 59.126 52.381 0.00 0.00 36.67 3.09
1478 5680 1.873591 GCTCCCAATGTACCGCATAAG 59.126 52.381 0.00 0.00 36.67 1.73
1479 5681 1.476110 GGCTCCCAATGTACCGCATAA 60.476 52.381 0.00 0.00 36.67 1.90
1480 5682 0.107831 GGCTCCCAATGTACCGCATA 59.892 55.000 0.00 0.00 36.67 3.14
1481 5683 1.152963 GGCTCCCAATGTACCGCAT 60.153 57.895 0.00 0.00 40.03 4.73
1482 5684 2.270850 GGCTCCCAATGTACCGCA 59.729 61.111 0.00 0.00 0.00 5.69
1483 5685 1.819632 CTGGCTCCCAATGTACCGC 60.820 63.158 0.00 0.00 30.80 5.68
1484 5686 0.469917 ATCTGGCTCCCAATGTACCG 59.530 55.000 0.00 0.00 30.80 4.02
1485 5687 1.490490 TGATCTGGCTCCCAATGTACC 59.510 52.381 0.00 0.00 30.80 3.34
1486 5688 2.171448 AGTGATCTGGCTCCCAATGTAC 59.829 50.000 0.00 0.00 30.80 2.90
1487 5689 2.435805 GAGTGATCTGGCTCCCAATGTA 59.564 50.000 0.00 0.00 30.80 2.29
1488 5690 1.211457 GAGTGATCTGGCTCCCAATGT 59.789 52.381 0.00 0.00 30.80 2.71
1489 5691 1.211212 TGAGTGATCTGGCTCCCAATG 59.789 52.381 0.00 0.00 30.80 2.82
1490 5692 1.211457 GTGAGTGATCTGGCTCCCAAT 59.789 52.381 0.00 0.00 30.80 3.16
1491 5693 0.615331 GTGAGTGATCTGGCTCCCAA 59.385 55.000 0.00 0.00 30.80 4.12
1492 5694 1.267574 GGTGAGTGATCTGGCTCCCA 61.268 60.000 0.00 0.00 0.00 4.37
1493 5695 0.980231 AGGTGAGTGATCTGGCTCCC 60.980 60.000 0.00 3.78 0.00 4.30
1494 5696 0.908198 AAGGTGAGTGATCTGGCTCC 59.092 55.000 0.00 0.00 0.00 4.70
1495 5697 1.552337 TGAAGGTGAGTGATCTGGCTC 59.448 52.381 0.00 0.11 0.00 4.70
1496 5698 1.649321 TGAAGGTGAGTGATCTGGCT 58.351 50.000 0.00 0.00 0.00 4.75
1497 5699 2.289945 ACTTGAAGGTGAGTGATCTGGC 60.290 50.000 0.00 0.00 0.00 4.85
1498 5700 3.692257 ACTTGAAGGTGAGTGATCTGG 57.308 47.619 0.00 0.00 0.00 3.86
1499 5701 5.788450 ACTTACTTGAAGGTGAGTGATCTG 58.212 41.667 0.00 0.00 39.74 2.90
1500 5702 6.071278 GGTACTTACTTGAAGGTGAGTGATCT 60.071 42.308 0.00 0.00 39.74 2.75
1501 5703 6.071278 AGGTACTTACTTGAAGGTGAGTGATC 60.071 42.308 0.00 0.00 39.74 2.92
1502 5704 5.780793 AGGTACTTACTTGAAGGTGAGTGAT 59.219 40.000 0.00 0.00 39.74 3.06
1503 5705 5.145564 AGGTACTTACTTGAAGGTGAGTGA 58.854 41.667 0.00 0.00 39.74 3.41
1504 5706 5.470047 AGGTACTTACTTGAAGGTGAGTG 57.530 43.478 0.00 0.00 39.74 3.51
1505 5707 6.351117 GCATAGGTACTTACTTGAAGGTGAGT 60.351 42.308 0.00 0.16 41.75 3.41
1506 5708 6.043411 GCATAGGTACTTACTTGAAGGTGAG 58.957 44.000 0.00 0.00 41.75 3.51
1507 5709 5.720041 AGCATAGGTACTTACTTGAAGGTGA 59.280 40.000 0.00 0.00 41.75 4.02
1508 5710 5.978814 AGCATAGGTACTTACTTGAAGGTG 58.021 41.667 0.00 0.00 41.75 4.00
1509 5711 7.015389 GGATAGCATAGGTACTTACTTGAAGGT 59.985 40.741 0.00 0.00 41.75 3.50
1510 5712 7.233757 AGGATAGCATAGGTACTTACTTGAAGG 59.766 40.741 0.00 0.00 41.75 3.46
1511 5713 8.085296 CAGGATAGCATAGGTACTTACTTGAAG 58.915 40.741 0.00 0.00 41.75 3.02
1512 5714 7.563924 ACAGGATAGCATAGGTACTTACTTGAA 59.436 37.037 0.00 0.00 41.75 2.69
1513 5715 7.067421 ACAGGATAGCATAGGTACTTACTTGA 58.933 38.462 0.00 0.00 41.75 3.02
1514 5716 7.291411 ACAGGATAGCATAGGTACTTACTTG 57.709 40.000 0.00 0.00 41.75 3.16
1515 5717 8.003044 TGTACAGGATAGCATAGGTACTTACTT 58.997 37.037 0.00 0.00 41.75 2.24
1516 5718 7.524290 TGTACAGGATAGCATAGGTACTTACT 58.476 38.462 0.00 0.00 41.75 2.24
1517 5719 7.756395 TGTACAGGATAGCATAGGTACTTAC 57.244 40.000 0.00 0.00 41.75 2.34
1518 5720 8.003044 ACTTGTACAGGATAGCATAGGTACTTA 58.997 37.037 12.54 0.00 41.75 2.24
1519 5721 6.839657 ACTTGTACAGGATAGCATAGGTACTT 59.160 38.462 12.54 0.00 41.75 2.24
1534 5736 4.442375 ACAGATTCTCGACTTGTACAGG 57.558 45.455 2.98 2.98 0.00 4.00
1591 5793 5.627499 TTCACCGAATCCATTTTCTTCTG 57.373 39.130 0.00 0.00 0.00 3.02
1822 6027 7.223584 TCACAATAATCCTTGACTTGACTTGA 58.776 34.615 0.00 0.00 0.00 3.02
1823 6028 7.439157 TCACAATAATCCTTGACTTGACTTG 57.561 36.000 0.00 0.00 0.00 3.16
1886 6125 8.610896 CAAACTATCTAGTACTACTACACGCTT 58.389 37.037 0.00 0.00 34.99 4.68
1905 6177 4.803098 AACGTACCTCAGAGCAAACTAT 57.197 40.909 0.00 0.00 0.00 2.12
1911 6183 1.508632 GCAAAACGTACCTCAGAGCA 58.491 50.000 0.00 0.00 0.00 4.26
1915 6187 0.601841 ACGGGCAAAACGTACCTCAG 60.602 55.000 0.00 0.00 43.60 3.35
1923 6195 0.099791 AAACTGACACGGGCAAAACG 59.900 50.000 0.00 0.00 37.36 3.60
1931 6203 6.898041 TCAATTATCTTTGAAACTGACACGG 58.102 36.000 0.00 0.00 32.82 4.94
1972 6244 2.695666 ACCTGACCGGACTTGATATCTG 59.304 50.000 9.46 0.00 36.31 2.90
1977 6249 2.158667 ACAAAACCTGACCGGACTTGAT 60.159 45.455 9.46 0.00 34.28 2.57
2021 6293 6.129874 TCATCAAGCTATAGACACAGGTAGT 58.870 40.000 3.21 0.00 0.00 2.73
2026 6298 7.433719 GTGTTACTCATCAAGCTATAGACACAG 59.566 40.741 3.21 0.00 34.33 3.66
2048 6320 1.202521 TCTCACAGCATGACGTGTGTT 60.203 47.619 17.71 0.00 43.80 3.32
2049 6321 0.389025 TCTCACAGCATGACGTGTGT 59.611 50.000 17.71 0.00 43.80 3.72
2050 6322 0.786581 GTCTCACAGCATGACGTGTG 59.213 55.000 14.10 14.10 44.59 3.82
2051 6323 0.676184 AGTCTCACAGCATGACGTGT 59.324 50.000 12.89 3.01 39.69 4.49
2052 6324 1.066136 CAGTCTCACAGCATGACGTG 58.934 55.000 0.00 2.35 39.69 4.49
2055 6327 2.602211 CGATTCAGTCTCACAGCATGAC 59.398 50.000 0.00 0.00 39.69 3.06
2056 6328 2.232208 ACGATTCAGTCTCACAGCATGA 59.768 45.455 0.00 0.00 39.69 3.07
2057 6329 2.347755 CACGATTCAGTCTCACAGCATG 59.652 50.000 0.00 0.00 46.00 4.06
2059 6331 1.337167 CCACGATTCAGTCTCACAGCA 60.337 52.381 0.00 0.00 0.00 4.41
2061 6333 2.489722 TCTCCACGATTCAGTCTCACAG 59.510 50.000 0.00 0.00 0.00 3.66
2062 6334 2.514803 TCTCCACGATTCAGTCTCACA 58.485 47.619 0.00 0.00 0.00 3.58
2063 6335 3.577649 TTCTCCACGATTCAGTCTCAC 57.422 47.619 0.00 0.00 0.00 3.51
2065 6337 7.545965 TCTTTTTATTCTCCACGATTCAGTCTC 59.454 37.037 0.00 0.00 0.00 3.36
2066 6338 7.386851 TCTTTTTATTCTCCACGATTCAGTCT 58.613 34.615 0.00 0.00 0.00 3.24
2067 6339 7.596749 TCTTTTTATTCTCCACGATTCAGTC 57.403 36.000 0.00 0.00 0.00 3.51
2070 6342 8.615878 TTCTTCTTTTTATTCTCCACGATTCA 57.384 30.769 0.00 0.00 0.00 2.57
2107 6437 4.028993 GGGAACATCTCACACCCTAAAA 57.971 45.455 0.00 0.00 37.75 1.52
2117 6447 0.776810 TTGGCCAAGGGAACATCTCA 59.223 50.000 16.05 0.00 0.00 3.27
2122 6452 1.872773 AAACTTTGGCCAAGGGAACA 58.127 45.000 29.07 8.79 36.72 3.18
2125 6455 1.484240 CACAAAACTTTGGCCAAGGGA 59.516 47.619 29.07 10.31 42.34 4.20
2148 6478 0.110599 TAAAATTGCACGCGGACACG 60.111 50.000 12.47 0.00 44.63 4.49
2153 6489 3.061928 CGATCAAATAAAATTGCACGCGG 60.062 43.478 12.47 0.00 0.00 6.46
2179 6515 7.402054 TGAGTTCTGTTGGGTTTCACATATAT 58.598 34.615 0.00 0.00 0.00 0.86
2183 6519 3.897239 TGAGTTCTGTTGGGTTTCACAT 58.103 40.909 0.00 0.00 0.00 3.21
2184 6520 3.358111 TGAGTTCTGTTGGGTTTCACA 57.642 42.857 0.00 0.00 0.00 3.58
2210 6546 5.006746 CCCGTTTTCTTCTGCATATAGACAC 59.993 44.000 0.00 0.00 0.00 3.67
2211 6547 5.116180 CCCGTTTTCTTCTGCATATAGACA 58.884 41.667 0.00 0.00 0.00 3.41
2212 6548 5.116882 ACCCGTTTTCTTCTGCATATAGAC 58.883 41.667 0.00 0.00 0.00 2.59
2214 6550 6.258160 CAAACCCGTTTTCTTCTGCATATAG 58.742 40.000 0.00 0.00 0.00 1.31
2216 6552 4.082245 CCAAACCCGTTTTCTTCTGCATAT 60.082 41.667 0.00 0.00 0.00 1.78
2217 6553 3.254657 CCAAACCCGTTTTCTTCTGCATA 59.745 43.478 0.00 0.00 0.00 3.14
2218 6554 2.035832 CCAAACCCGTTTTCTTCTGCAT 59.964 45.455 0.00 0.00 0.00 3.96
2255 6591 4.506271 GCATGATCTGGATCCCAATGTACT 60.506 45.833 9.90 0.00 37.02 2.73
2298 6634 4.617253 TCTCAACTTGGTAAAGCTAGCA 57.383 40.909 18.83 0.00 36.84 3.49
2349 6686 8.905850 ACCGTTTTCTTCTACAGGAAATAAAAA 58.094 29.630 0.00 0.00 32.14 1.94
2354 6691 6.293244 CGAAACCGTTTTCTTCTACAGGAAAT 60.293 38.462 3.85 0.00 39.29 2.17
2362 6699 4.053295 CTCACCGAAACCGTTTTCTTCTA 58.947 43.478 3.85 0.00 39.29 2.10
2367 6704 2.033151 CACTCTCACCGAAACCGTTTTC 60.033 50.000 0.00 0.00 38.23 2.29
2369 6706 1.578583 CACTCTCACCGAAACCGTTT 58.421 50.000 0.00 0.00 0.00 3.60
2371 6708 1.300697 GCACTCTCACCGAAACCGT 60.301 57.895 0.00 0.00 0.00 4.83
2372 6709 0.600255 AAGCACTCTCACCGAAACCG 60.600 55.000 0.00 0.00 0.00 4.44
2373 6710 2.450609 TAAGCACTCTCACCGAAACC 57.549 50.000 0.00 0.00 0.00 3.27
2374 6711 2.094417 GCATAAGCACTCTCACCGAAAC 59.906 50.000 0.00 0.00 41.58 2.78
2375 6712 2.346803 GCATAAGCACTCTCACCGAAA 58.653 47.619 0.00 0.00 41.58 3.46
2376 6713 1.735700 CGCATAAGCACTCTCACCGAA 60.736 52.381 0.00 0.00 42.27 4.30
2377 6714 0.179137 CGCATAAGCACTCTCACCGA 60.179 55.000 0.00 0.00 42.27 4.69
2378 6715 1.148157 CCGCATAAGCACTCTCACCG 61.148 60.000 0.00 0.00 42.27 4.94
2379 6716 0.108138 ACCGCATAAGCACTCTCACC 60.108 55.000 0.00 0.00 42.27 4.02
2380 6717 2.194271 GTACCGCATAAGCACTCTCAC 58.806 52.381 0.00 0.00 42.27 3.51
2436 6773 4.065088 TCAACTTGGTAAAGCTAGCACTG 58.935 43.478 18.83 0.84 35.29 3.66
2466 6816 5.006165 GCTATTTGAGGTGATTCAGACTTCG 59.994 44.000 0.00 0.00 0.00 3.79
2485 6835 9.948964 ATTTTCTGCAGGAAATAAAAAGCTATT 57.051 25.926 28.13 3.74 42.63 1.73
2535 7590 4.726583 CATGATCTGGATCCCAATGAACT 58.273 43.478 9.90 0.00 37.02 3.01
2538 7593 2.444010 TGCATGATCTGGATCCCAATGA 59.556 45.455 9.90 2.80 37.02 2.57
2583 7642 5.689383 AATTAACACATGCTCGACTTGTT 57.311 34.783 0.00 0.00 34.59 2.83
2675 8434 1.233019 CACGATCTGGATCCCAATGC 58.767 55.000 9.90 0.00 34.40 3.56
2780 8539 3.287222 TCACCAAAACCCTTGTCTTCTG 58.713 45.455 0.00 0.00 0.00 3.02
2808 8567 4.411869 TCTGGATCCCAATGTACTGCATAA 59.588 41.667 9.90 0.00 36.67 1.90
2856 8615 6.660521 TCATCTTGAACTGGTAAAGATTGCAT 59.339 34.615 2.35 0.00 38.33 3.96
2858 8617 6.500684 TCATCTTGAACTGGTAAAGATTGC 57.499 37.500 2.35 0.00 38.33 3.56
2860 8619 7.884877 TGACATCATCTTGAACTGGTAAAGATT 59.115 33.333 2.35 0.00 38.33 2.40
2862 8621 6.768483 TGACATCATCTTGAACTGGTAAAGA 58.232 36.000 0.00 0.00 34.61 2.52
2866 8625 6.942005 ACAATTGACATCATCTTGAACTGGTA 59.058 34.615 13.59 0.00 0.00 3.25
2867 8626 5.771666 ACAATTGACATCATCTTGAACTGGT 59.228 36.000 13.59 0.00 0.00 4.00
2869 8628 6.905578 TCACAATTGACATCATCTTGAACTG 58.094 36.000 13.59 0.00 0.00 3.16
2874 8633 6.750501 GTGGATTCACAATTGACATCATCTTG 59.249 38.462 13.59 0.00 43.13 3.02
2875 8634 6.662234 AGTGGATTCACAATTGACATCATCTT 59.338 34.615 13.59 0.00 45.91 2.40
2876 8635 6.185511 AGTGGATTCACAATTGACATCATCT 58.814 36.000 13.59 8.79 45.91 2.90
2877 8636 6.094464 TGAGTGGATTCACAATTGACATCATC 59.906 38.462 13.59 5.98 45.91 2.92
2880 8639 5.885230 TGAGTGGATTCACAATTGACATC 57.115 39.130 13.59 9.65 45.91 3.06
2881 8640 6.203808 CATGAGTGGATTCACAATTGACAT 57.796 37.500 13.59 0.31 45.91 3.06
2882 8641 5.632244 CATGAGTGGATTCACAATTGACA 57.368 39.130 13.59 0.00 45.91 3.58
2916 8677 6.460953 GCACCAAAACCATTTTCTTCTACAGA 60.461 38.462 0.00 0.00 0.00 3.41
2919 8680 5.596845 TGCACCAAAACCATTTTCTTCTAC 58.403 37.500 0.00 0.00 0.00 2.59
2927 8688 2.287769 GCACTTGCACCAAAACCATTT 58.712 42.857 0.00 0.00 41.59 2.32
2930 8691 1.140589 CGCACTTGCACCAAAACCA 59.859 52.632 1.48 0.00 42.21 3.67
2941 8702 1.286501 ATGTACCGCATACGCACTTG 58.713 50.000 0.00 0.00 38.40 3.16
2942 8703 1.663643 CAATGTACCGCATACGCACTT 59.336 47.619 0.00 0.00 36.67 3.16
2943 8704 1.286501 CAATGTACCGCATACGCACT 58.713 50.000 0.00 0.00 36.67 4.40
2944 8705 0.303493 CCAATGTACCGCATACGCAC 59.697 55.000 0.00 0.00 36.67 5.34
2945 8706 0.812014 CCCAATGTACCGCATACGCA 60.812 55.000 0.00 0.00 36.67 5.24
2946 8707 0.531090 TCCCAATGTACCGCATACGC 60.531 55.000 0.00 0.00 36.67 4.42
2947 8708 2.066262 GATCCCAATGTACCGCATACG 58.934 52.381 0.00 0.00 36.67 3.06
2948 8709 2.224426 TGGATCCCAATGTACCGCATAC 60.224 50.000 9.90 0.00 36.67 2.39
2949 8710 2.038426 CTGGATCCCAATGTACCGCATA 59.962 50.000 9.90 0.00 36.67 3.14
2950 8711 0.843309 TGGATCCCAATGTACCGCAT 59.157 50.000 9.90 0.00 40.03 4.73
2951 8712 0.180171 CTGGATCCCAATGTACCGCA 59.820 55.000 9.90 0.00 30.80 5.69
2952 8713 0.468226 TCTGGATCCCAATGTACCGC 59.532 55.000 9.90 0.00 30.80 5.68
2953 8714 2.368548 TGATCTGGATCCCAATGTACCG 59.631 50.000 9.90 0.00 37.02 4.02
2954 8715 3.136443 TGTGATCTGGATCCCAATGTACC 59.864 47.826 9.90 0.00 37.02 3.34
2955 8716 4.130118 GTGTGATCTGGATCCCAATGTAC 58.870 47.826 9.90 2.39 37.02 2.90
2956 8717 3.779738 TGTGTGATCTGGATCCCAATGTA 59.220 43.478 9.90 0.00 37.02 2.29
2957 8718 2.577563 TGTGTGATCTGGATCCCAATGT 59.422 45.455 9.90 0.00 37.02 2.71
2958 8719 2.947652 GTGTGTGATCTGGATCCCAATG 59.052 50.000 9.90 0.00 37.02 2.82
2959 8720 2.092212 GGTGTGTGATCTGGATCCCAAT 60.092 50.000 9.90 2.06 37.02 3.16
2960 8721 1.281867 GGTGTGTGATCTGGATCCCAA 59.718 52.381 9.90 0.00 37.02 4.12
2961 8722 0.911769 GGTGTGTGATCTGGATCCCA 59.088 55.000 9.90 0.00 37.02 4.37
2962 8723 1.207791 AGGTGTGTGATCTGGATCCC 58.792 55.000 9.90 0.00 37.02 3.85
2963 8724 2.237143 TGAAGGTGTGTGATCTGGATCC 59.763 50.000 4.20 4.20 37.02 3.36
2964 8725 3.616956 TGAAGGTGTGTGATCTGGATC 57.383 47.619 3.83 3.83 38.29 3.36
2965 8726 3.328931 ACTTGAAGGTGTGTGATCTGGAT 59.671 43.478 0.00 0.00 0.00 3.41
2966 8727 2.705658 ACTTGAAGGTGTGTGATCTGGA 59.294 45.455 0.00 0.00 0.00 3.86
2967 8728 3.131709 ACTTGAAGGTGTGTGATCTGG 57.868 47.619 0.00 0.00 0.00 3.86
2968 8729 5.300752 ACTTACTTGAAGGTGTGTGATCTG 58.699 41.667 0.00 0.00 39.74 2.90
2969 8730 5.552870 ACTTACTTGAAGGTGTGTGATCT 57.447 39.130 0.00 0.00 39.74 2.75
2970 8731 5.638234 GGTACTTACTTGAAGGTGTGTGATC 59.362 44.000 0.00 0.00 39.74 2.92
2971 8732 5.307196 AGGTACTTACTTGAAGGTGTGTGAT 59.693 40.000 0.00 0.00 39.74 3.06
2972 8733 4.652421 AGGTACTTACTTGAAGGTGTGTGA 59.348 41.667 0.00 0.00 39.74 3.58
2973 8734 4.957296 AGGTACTTACTTGAAGGTGTGTG 58.043 43.478 0.00 0.00 39.74 3.82
2974 8735 6.698380 CATAGGTACTTACTTGAAGGTGTGT 58.302 40.000 0.00 0.00 41.75 3.72
2975 8736 5.581085 GCATAGGTACTTACTTGAAGGTGTG 59.419 44.000 0.00 0.00 41.75 3.82
2976 8737 5.484290 AGCATAGGTACTTACTTGAAGGTGT 59.516 40.000 0.00 0.00 41.75 4.16
2977 8738 5.978814 AGCATAGGTACTTACTTGAAGGTG 58.021 41.667 0.00 0.00 41.75 4.00
2978 8739 7.785506 AGATAGCATAGGTACTTACTTGAAGGT 59.214 37.037 0.00 0.00 41.75 3.50
2979 8740 8.085296 CAGATAGCATAGGTACTTACTTGAAGG 58.915 40.741 0.00 0.00 41.75 3.46
2980 8741 8.851145 TCAGATAGCATAGGTACTTACTTGAAG 58.149 37.037 0.00 0.00 41.75 3.02
2981 8742 8.762481 TCAGATAGCATAGGTACTTACTTGAA 57.238 34.615 0.00 0.00 41.75 2.69
2982 8743 8.630917 GTTCAGATAGCATAGGTACTTACTTGA 58.369 37.037 0.00 0.00 41.75 3.02
2983 8744 7.868415 GGTTCAGATAGCATAGGTACTTACTTG 59.132 40.741 0.00 0.00 41.75 3.16
2984 8745 7.563924 TGGTTCAGATAGCATAGGTACTTACTT 59.436 37.037 0.00 0.00 41.75 2.24
2985 8746 7.067421 TGGTTCAGATAGCATAGGTACTTACT 58.933 38.462 0.00 0.00 41.75 2.24
2986 8747 7.286215 TGGTTCAGATAGCATAGGTACTTAC 57.714 40.000 0.00 0.00 41.75 2.34
2987 8748 7.563924 ACTTGGTTCAGATAGCATAGGTACTTA 59.436 37.037 0.00 0.00 41.75 2.24
2988 8749 6.384305 ACTTGGTTCAGATAGCATAGGTACTT 59.616 38.462 0.00 0.00 41.75 2.24
2989 8750 5.900123 ACTTGGTTCAGATAGCATAGGTACT 59.100 40.000 0.00 0.00 46.37 2.73
2990 8751 6.163135 ACTTGGTTCAGATAGCATAGGTAC 57.837 41.667 0.00 0.00 0.00 3.34
2991 8752 5.009710 CGACTTGGTTCAGATAGCATAGGTA 59.990 44.000 0.00 0.00 0.00 3.08
2992 8753 4.202161 CGACTTGGTTCAGATAGCATAGGT 60.202 45.833 0.00 0.00 0.00 3.08
2993 8754 4.302455 CGACTTGGTTCAGATAGCATAGG 58.698 47.826 0.00 0.00 0.00 2.57
2994 8755 3.738282 GCGACTTGGTTCAGATAGCATAG 59.262 47.826 0.00 0.00 0.00 2.23
2995 8756 3.132111 TGCGACTTGGTTCAGATAGCATA 59.868 43.478 0.00 0.00 0.00 3.14
2996 8757 2.093500 TGCGACTTGGTTCAGATAGCAT 60.093 45.455 0.00 0.00 0.00 3.79
2997 8758 1.275010 TGCGACTTGGTTCAGATAGCA 59.725 47.619 0.00 0.00 0.00 3.49
2998 8759 2.010145 TGCGACTTGGTTCAGATAGC 57.990 50.000 0.00 0.00 0.00 2.97
2999 8760 5.551760 AATTTGCGACTTGGTTCAGATAG 57.448 39.130 0.00 0.00 0.00 2.08
3000 8761 5.240623 ACAAATTTGCGACTTGGTTCAGATA 59.759 36.000 18.12 0.00 0.00 1.98
3001 8762 4.037923 ACAAATTTGCGACTTGGTTCAGAT 59.962 37.500 18.12 0.00 0.00 2.90
3002 8763 3.380004 ACAAATTTGCGACTTGGTTCAGA 59.620 39.130 18.12 0.00 0.00 3.27
3003 8764 3.705604 ACAAATTTGCGACTTGGTTCAG 58.294 40.909 18.12 0.00 0.00 3.02
3004 8765 3.791973 ACAAATTTGCGACTTGGTTCA 57.208 38.095 18.12 0.00 0.00 3.18
3005 8766 6.763303 ATTAACAAATTTGCGACTTGGTTC 57.237 33.333 18.12 0.00 0.00 3.62
3006 8767 6.536941 ACAATTAACAAATTTGCGACTTGGTT 59.463 30.769 18.12 5.03 0.00 3.67
3007 8768 6.019156 CACAATTAACAAATTTGCGACTTGGT 60.019 34.615 18.12 6.14 0.00 3.67
3008 8769 6.199908 TCACAATTAACAAATTTGCGACTTGG 59.800 34.615 18.12 10.09 0.00 3.61
3009 8770 7.159437 TCACAATTAACAAATTTGCGACTTG 57.841 32.000 18.12 16.56 0.00 3.16
3010 8771 7.763172 TTCACAATTAACAAATTTGCGACTT 57.237 28.000 18.12 7.46 0.00 3.01
3011 8772 7.651304 TGATTCACAATTAACAAATTTGCGACT 59.349 29.630 18.12 3.32 0.00 4.18
3012 8773 7.782242 TGATTCACAATTAACAAATTTGCGAC 58.218 30.769 18.12 0.00 0.00 5.19
3013 8774 7.936950 TGATTCACAATTAACAAATTTGCGA 57.063 28.000 18.12 3.30 0.00 5.10
3039 8800 9.897744 CTTCTGCAGAAAATAACAAACTATGAA 57.102 29.630 28.16 1.37 33.07 2.57
3040 8801 9.283768 TCTTCTGCAGAAAATAACAAACTATGA 57.716 29.630 28.16 14.43 33.07 2.15
3041 8802 9.897744 TTCTTCTGCAGAAAATAACAAACTATG 57.102 29.630 28.16 12.45 38.68 2.23
3055 8816 5.104982 ACCAAAACCATTTTCTTCTGCAGAA 60.105 36.000 26.87 26.87 39.99 3.02
3056 8817 4.405358 ACCAAAACCATTTTCTTCTGCAGA 59.595 37.500 13.74 13.74 0.00 4.26
3057 8818 4.508861 CACCAAAACCATTTTCTTCTGCAG 59.491 41.667 7.63 7.63 0.00 4.41
3058 8819 4.440880 CACCAAAACCATTTTCTTCTGCA 58.559 39.130 0.00 0.00 0.00 4.41
3059 8820 3.248363 GCACCAAAACCATTTTCTTCTGC 59.752 43.478 0.00 0.00 0.00 4.26
3060 8821 4.440880 TGCACCAAAACCATTTTCTTCTG 58.559 39.130 0.00 0.00 0.00 3.02
3061 8822 4.751767 TGCACCAAAACCATTTTCTTCT 57.248 36.364 0.00 0.00 0.00 2.85
3062 8823 4.875536 ACTTGCACCAAAACCATTTTCTTC 59.124 37.500 0.00 0.00 0.00 2.87
3063 8824 4.635324 CACTTGCACCAAAACCATTTTCTT 59.365 37.500 0.00 0.00 0.00 2.52
3064 8825 4.190772 CACTTGCACCAAAACCATTTTCT 58.809 39.130 0.00 0.00 0.00 2.52
3065 8826 3.242706 GCACTTGCACCAAAACCATTTTC 60.243 43.478 0.00 0.00 41.59 2.29
3066 8827 2.682352 GCACTTGCACCAAAACCATTTT 59.318 40.909 0.00 0.00 41.59 1.82
3067 8828 2.093021 AGCACTTGCACCAAAACCATTT 60.093 40.909 3.62 0.00 45.16 2.32
3068 8829 1.485895 AGCACTTGCACCAAAACCATT 59.514 42.857 3.62 0.00 45.16 3.16
3069 8830 1.122227 AGCACTTGCACCAAAACCAT 58.878 45.000 3.62 0.00 45.16 3.55
3070 8831 0.901124 AAGCACTTGCACCAAAACCA 59.099 45.000 3.62 0.00 45.16 3.67
3079 8840 1.083489 GTACCGCATAAGCACTTGCA 58.917 50.000 3.62 0.00 45.16 4.08
3239 9147 3.080641 CTGGATCCCAGTGCACCA 58.919 61.111 14.63 0.87 45.82 4.17
3280 9188 4.767409 TGCGACTAGGTTCAGATAGCATAT 59.233 41.667 0.00 0.00 0.00 1.78
3393 9301 2.382882 ACGAGAAGGAGCATGATCTGA 58.617 47.619 11.34 0.00 0.00 3.27
3422 9330 4.968259 TCTCAACTTGGTTAAGCTAGCAA 58.032 39.130 18.83 0.00 37.43 3.91
3424 9332 5.163713 CCAATCTCAACTTGGTTAAGCTAGC 60.164 44.000 14.69 6.62 38.67 3.42
3432 9340 3.593442 TCACCCAATCTCAACTTGGTT 57.407 42.857 1.77 0.00 41.35 3.67
3483 9391 1.921243 AACCGTTTTGTTCTGCAAGC 58.079 45.000 0.00 0.00 38.47 4.01
3485 9393 2.996621 CCAAAACCGTTTTGTTCTGCAA 59.003 40.909 27.10 0.00 46.53 4.08
3580 9489 5.263599 TGATTCCCAAATAACACATGCTCT 58.736 37.500 0.00 0.00 0.00 4.09
3593 9502 4.098654 ACAAACGATGTGTTGATTCCCAAA 59.901 37.500 0.00 0.00 41.93 3.28
3597 9506 7.061789 GGAAATAACAAACGATGTGTTGATTCC 59.938 37.037 19.70 19.70 42.99 3.01
3606 9515 4.759693 TCTGCAGGAAATAACAAACGATGT 59.240 37.500 15.13 0.00 46.82 3.06
3663 9585 1.202687 GCACGATCTGGATCCCAATGA 60.203 52.381 9.90 2.80 34.40 2.57
3724 9646 8.877779 GTGATATATGATTCAGACTTGCCATAC 58.122 37.037 0.00 0.00 0.00 2.39
3859 9781 8.196103 TGATTCACAATTGACACAATCTTGAAA 58.804 29.630 13.59 0.00 0.00 2.69
3982 10449 5.063204 TGCGGCTTGTTTAAGATAGCATAT 58.937 37.500 0.00 0.00 35.65 1.78
3996 10463 3.726291 ACTAACATTTTTGCGGCTTGT 57.274 38.095 0.00 0.00 0.00 3.16
4001 10468 5.689514 TGATTCACAACTAACATTTTTGCGG 59.310 36.000 0.00 0.00 0.00 5.69
4026 10501 8.044060 TCTGCAGAAAATAACAAACTATGAGG 57.956 34.615 15.67 0.00 0.00 3.86
4066 10671 1.670811 GTACCGCATAAGCACTTGCAT 59.329 47.619 3.62 0.00 45.16 3.96
4144 11297 8.729756 TGATGATTCAGTTCGAACACATTAATT 58.270 29.630 28.78 8.26 36.12 1.40
4170 11323 9.965824 CATTTTCTAGGAAATAAAACACTGTGT 57.034 29.630 8.73 7.80 0.00 3.72
4211 11364 3.496160 GGATCCCAATGTACCGCATAAGT 60.496 47.826 0.00 0.00 36.67 2.24
4256 11409 3.899052 ATTGGTTAGGTAGCGCAAGTA 57.101 42.857 11.47 0.00 41.68 2.24
4260 11413 3.375922 GCTAAAATTGGTTAGGTAGCGCA 59.624 43.478 11.47 0.00 32.62 6.09
4261 11414 3.375922 TGCTAAAATTGGTTAGGTAGCGC 59.624 43.478 0.00 0.00 37.39 5.92
4262 11415 5.448632 CCTTGCTAAAATTGGTTAGGTAGCG 60.449 44.000 0.00 0.00 37.39 4.26
4286 11439 0.738975 GCTTTTATCCGGCCTGAACC 59.261 55.000 0.00 0.00 0.00 3.62
4479 11682 0.238289 CACCTCGTGCAAACATGGTC 59.762 55.000 0.00 0.00 33.32 4.02
4608 11811 2.439409 CATGAATGAAGGGTGTCAGCA 58.561 47.619 4.12 0.00 0.00 4.41
4705 11908 2.347490 GCCGCTGACTCCCAAAGA 59.653 61.111 0.00 0.00 0.00 2.52
4758 11961 1.431243 ACATACATGGTGTTGGGGGTT 59.569 47.619 0.00 0.00 0.00 4.11
5378 12605 5.656416 CCTATCAGGGCAAGGATTAAAAACA 59.344 40.000 0.00 0.00 31.64 2.83
5476 12703 3.634448 TGATGGTGGTTACTTTGTTGGTG 59.366 43.478 0.00 0.00 0.00 4.17
5483 12710 6.270231 ACTTCTAGACTGATGGTGGTTACTTT 59.730 38.462 0.00 0.00 0.00 2.66
5761 13000 4.724074 TCGTTGTCGTCCATTATACCTT 57.276 40.909 0.00 0.00 38.33 3.50
5778 13017 7.255491 TCAGTCGTATACAATACAGATCGTT 57.745 36.000 3.32 0.00 0.00 3.85
5781 13020 8.916654 CCATTTCAGTCGTATACAATACAGATC 58.083 37.037 3.32 0.00 0.00 2.75
5784 13023 6.984474 ACCCATTTCAGTCGTATACAATACAG 59.016 38.462 3.32 0.00 0.00 2.74
5810 13051 4.572795 TCTGTTTTCGTGTTTGCACATCTA 59.427 37.500 0.00 0.00 45.50 1.98
5825 13066 8.180267 CCTGTGATAACATGAATCTCTGTTTTC 58.820 37.037 0.00 8.87 36.92 2.29
6003 13680 7.441157 TGCTATATGTGATAAAAACCGAGGAAG 59.559 37.037 0.00 0.00 0.00 3.46
6009 13686 9.825972 CCTATTTGCTATATGTGATAAAAACCG 57.174 33.333 0.00 0.00 0.00 4.44


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.