Multiple sequence alignment - TraesCS6A01G094100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G094100 chr6A 100.000 2801 0 0 1 2801 61399526 61402326 0.000000e+00 5173.0
1 TraesCS6A01G094100 chr6A 85.696 1538 178 19 434 1957 61414381 61415890 0.000000e+00 1583.0
2 TraesCS6A01G094100 chr6A 85.323 1533 187 23 434 1935 61411217 61412742 0.000000e+00 1550.0
3 TraesCS6A01G094100 chr6A 84.531 1545 189 31 434 1957 61421955 61423470 0.000000e+00 1483.0
4 TraesCS6A01G094100 chr6A 88.306 1163 126 8 786 1943 61408528 61409685 0.000000e+00 1386.0
5 TraesCS6A01G094100 chr6A 84.688 1378 179 19 661 2016 61418267 61419634 0.000000e+00 1347.0
6 TraesCS6A01G094100 chr6A 93.220 118 7 1 434 551 61418145 61418261 3.710000e-39 172.0
7 TraesCS6A01G094100 chr6B 83.148 2071 268 52 229 2262 117771434 117773460 0.000000e+00 1816.0
8 TraesCS6A01G094100 chr6B 82.288 2072 272 54 229 2262 117801545 117803559 0.000000e+00 1705.0
9 TraesCS6A01G094100 chr6B 86.211 1552 177 21 434 1957 117839836 117841378 0.000000e+00 1646.0
10 TraesCS6A01G094100 chr6B 86.460 1418 168 16 540 1943 117836668 117838075 0.000000e+00 1533.0
11 TraesCS6A01G094100 chr6B 85.895 1347 164 13 918 2262 117751105 117752427 0.000000e+00 1411.0
12 TraesCS6A01G094100 chr6B 85.545 1349 163 18 918 2262 117791118 117792438 0.000000e+00 1382.0
13 TraesCS6A01G094100 chr6B 95.876 194 7 1 2278 2470 117792424 117792617 2.090000e-81 313.0
14 TraesCS6A01G094100 chr6B 95.337 193 9 0 2278 2470 117773446 117773638 9.750000e-80 307.0
15 TraesCS6A01G094100 chr6B 94.845 194 9 1 2278 2470 117752413 117752606 4.530000e-78 302.0
16 TraesCS6A01G094100 chr6B 92.784 194 13 1 2278 2470 117803545 117803738 2.120000e-71 279.0
17 TraesCS6A01G094100 chr6B 90.909 55 4 1 172 226 134275854 134275801 3.870000e-09 73.1
18 TraesCS6A01G094100 chr6D 85.085 1475 190 22 504 1957 53681840 53680375 0.000000e+00 1478.0
19 TraesCS6A01G094100 chr6D 83.726 1358 197 20 676 2016 53775499 53774149 0.000000e+00 1262.0
20 TraesCS6A01G094100 chr6D 82.213 253 33 9 171 417 53687646 53687400 1.020000e-49 207.0
21 TraesCS6A01G094100 chr6D 76.650 394 59 23 427 819 53764346 53763985 1.320000e-43 187.0
22 TraesCS6A01G094100 chrUn 87.224 1268 147 12 700 1957 381574049 381572787 0.000000e+00 1430.0
23 TraesCS6A01G094100 chrUn 84.615 715 77 16 434 1137 77431646 77430954 0.000000e+00 680.0
24 TraesCS6A01G094100 chrUn 90.957 188 15 2 2467 2653 230309210 230309024 4.630000e-63 252.0
25 TraesCS6A01G094100 chrUn 90.957 188 15 2 2467 2653 385333690 385333504 4.630000e-63 252.0
26 TraesCS6A01G094100 chr5A 83.845 879 131 7 1000 1877 635408789 635407921 0.000000e+00 826.0
27 TraesCS6A01G094100 chr5A 84.204 804 125 2 1000 1802 635411487 635410685 0.000000e+00 780.0
28 TraesCS6A01G094100 chr3B 97.125 313 8 1 2490 2801 561566901 561567213 6.870000e-146 527.0
29 TraesCS6A01G094100 chr4B 95.102 245 11 1 2535 2779 15738797 15739040 4.380000e-103 385.0
30 TraesCS6A01G094100 chr7B 96.894 161 5 0 2493 2653 25881986 25882146 1.280000e-68 270.0
31 TraesCS6A01G094100 chr3A 91.099 191 15 2 2467 2656 730204929 730204740 9.950000e-65 257.0
32 TraesCS6A01G094100 chr3A 90.909 187 17 0 2467 2653 631782298 631782484 4.630000e-63 252.0
33 TraesCS6A01G094100 chr5D 96.129 155 6 0 2647 2801 109569313 109569159 1.290000e-63 254.0
34 TraesCS6A01G094100 chr1A 90.576 191 18 0 2466 2656 504288796 504288606 1.290000e-63 254.0
35 TraesCS6A01G094100 chr1B 90.957 188 15 2 2467 2653 59991912 59992098 4.630000e-63 252.0
36 TraesCS6A01G094100 chr2D 96.875 32 1 0 92 123 22169269 22169238 1.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G094100 chr6A 61399526 61402326 2800 False 5173.0 5173 100.000000 1 2801 1 chr6A.!!$F1 2800
1 TraesCS6A01G094100 chr6A 61408528 61423470 14942 False 1253.5 1583 86.960667 434 2016 6 chr6A.!!$F2 1582
2 TraesCS6A01G094100 chr6B 117836668 117841378 4710 False 1589.5 1646 86.335500 434 1957 2 chr6B.!!$F5 1523
3 TraesCS6A01G094100 chr6B 117771434 117773638 2204 False 1061.5 1816 89.242500 229 2470 2 chr6B.!!$F2 2241
4 TraesCS6A01G094100 chr6B 117801545 117803738 2193 False 992.0 1705 87.536000 229 2470 2 chr6B.!!$F4 2241
5 TraesCS6A01G094100 chr6B 117751105 117752606 1501 False 856.5 1411 90.370000 918 2470 2 chr6B.!!$F1 1552
6 TraesCS6A01G094100 chr6B 117791118 117792617 1499 False 847.5 1382 90.710500 918 2470 2 chr6B.!!$F3 1552
7 TraesCS6A01G094100 chr6D 53680375 53681840 1465 True 1478.0 1478 85.085000 504 1957 1 chr6D.!!$R1 1453
8 TraesCS6A01G094100 chr6D 53774149 53775499 1350 True 1262.0 1262 83.726000 676 2016 1 chr6D.!!$R4 1340
9 TraesCS6A01G094100 chrUn 381572787 381574049 1262 True 1430.0 1430 87.224000 700 1957 1 chrUn.!!$R3 1257
10 TraesCS6A01G094100 chrUn 77430954 77431646 692 True 680.0 680 84.615000 434 1137 1 chrUn.!!$R1 703
11 TraesCS6A01G094100 chr5A 635407921 635411487 3566 True 803.0 826 84.024500 1000 1877 2 chr5A.!!$R1 877

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
963 6648 0.036732 TGGACACACCCATCTCTTGC 59.963 55.0 0.0 0.0 38.0 4.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2498 15528 0.03467 AAGTGGCTGAATCTCAGGGC 60.035 55.0 5.84 0.51 44.43 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 9.625747 AAAAAGTTGGTGGTAAAAATCATTCAT 57.374 25.926 0.00 0.00 0.00 2.57
28 29 8.606040 AAAGTTGGTGGTAAAAATCATTCATG 57.394 30.769 0.00 0.00 0.00 3.07
29 30 6.700352 AGTTGGTGGTAAAAATCATTCATGG 58.300 36.000 0.00 0.00 0.00 3.66
30 31 6.496565 AGTTGGTGGTAAAAATCATTCATGGA 59.503 34.615 0.00 0.00 0.00 3.41
31 32 6.528537 TGGTGGTAAAAATCATTCATGGAG 57.471 37.500 0.00 0.00 0.00 3.86
32 33 5.421693 TGGTGGTAAAAATCATTCATGGAGG 59.578 40.000 0.00 0.00 0.00 4.30
33 34 5.422012 GGTGGTAAAAATCATTCATGGAGGT 59.578 40.000 0.00 0.00 0.00 3.85
34 35 6.405842 GGTGGTAAAAATCATTCATGGAGGTC 60.406 42.308 0.00 0.00 0.00 3.85
35 36 6.378280 GTGGTAAAAATCATTCATGGAGGTCT 59.622 38.462 0.00 0.00 0.00 3.85
37 38 5.927281 AAAAATCATTCATGGAGGTCTGG 57.073 39.130 0.00 0.00 0.00 3.86
39 40 4.434545 AATCATTCATGGAGGTCTGGAG 57.565 45.455 0.00 0.00 0.00 3.86
40 41 3.120468 TCATTCATGGAGGTCTGGAGA 57.880 47.619 0.00 0.00 0.00 3.71
41 42 3.453868 TCATTCATGGAGGTCTGGAGAA 58.546 45.455 0.00 0.00 0.00 2.87
43 44 3.988976 TTCATGGAGGTCTGGAGAAAG 57.011 47.619 0.00 0.00 0.00 2.62
44 45 3.190383 TCATGGAGGTCTGGAGAAAGA 57.810 47.619 0.00 0.00 0.00 2.52
45 46 3.520696 TCATGGAGGTCTGGAGAAAGAA 58.479 45.455 0.00 0.00 0.00 2.52
46 47 3.517100 TCATGGAGGTCTGGAGAAAGAAG 59.483 47.826 0.00 0.00 0.00 2.85
47 48 3.260269 TGGAGGTCTGGAGAAAGAAGA 57.740 47.619 0.00 0.00 0.00 2.87
48 49 3.796111 TGGAGGTCTGGAGAAAGAAGAT 58.204 45.455 0.00 0.00 0.00 2.40
49 50 3.517100 TGGAGGTCTGGAGAAAGAAGATG 59.483 47.826 0.00 0.00 0.00 2.90
50 51 3.517500 GGAGGTCTGGAGAAAGAAGATGT 59.482 47.826 0.00 0.00 0.00 3.06
51 52 4.019771 GGAGGTCTGGAGAAAGAAGATGTT 60.020 45.833 0.00 0.00 0.00 2.71
52 53 5.159273 AGGTCTGGAGAAAGAAGATGTTC 57.841 43.478 0.00 0.00 0.00 3.18
53 54 4.019771 AGGTCTGGAGAAAGAAGATGTTCC 60.020 45.833 0.00 0.00 32.48 3.62
54 55 4.263068 GGTCTGGAGAAAGAAGATGTTCCA 60.263 45.833 0.00 0.00 32.48 3.53
55 56 5.308825 GTCTGGAGAAAGAAGATGTTCCAA 58.691 41.667 0.00 0.00 34.57 3.53
56 57 5.765182 GTCTGGAGAAAGAAGATGTTCCAAA 59.235 40.000 0.00 0.00 34.57 3.28
57 58 6.263168 GTCTGGAGAAAGAAGATGTTCCAAAA 59.737 38.462 0.00 0.00 34.57 2.44
58 59 6.833416 TCTGGAGAAAGAAGATGTTCCAAAAA 59.167 34.615 0.00 0.00 34.57 1.94
59 60 7.013655 TCTGGAGAAAGAAGATGTTCCAAAAAG 59.986 37.037 0.00 0.00 34.57 2.27
60 61 6.040842 TGGAGAAAGAAGATGTTCCAAAAAGG 59.959 38.462 0.00 0.00 39.47 3.11
61 62 6.410942 AGAAAGAAGATGTTCCAAAAAGGG 57.589 37.500 0.00 0.00 38.24 3.95
62 63 4.607293 AAGAAGATGTTCCAAAAAGGGC 57.393 40.909 0.00 0.00 38.24 5.19
64 65 3.966665 AGAAGATGTTCCAAAAAGGGCAA 59.033 39.130 0.00 0.00 38.24 4.52
65 66 4.594491 AGAAGATGTTCCAAAAAGGGCAAT 59.406 37.500 0.00 0.00 38.24 3.56
66 67 4.980339 AGATGTTCCAAAAAGGGCAATT 57.020 36.364 0.00 0.00 38.24 2.32
67 68 5.308976 AGATGTTCCAAAAAGGGCAATTT 57.691 34.783 0.00 0.00 38.24 1.82
69 70 6.128486 AGATGTTCCAAAAAGGGCAATTTTT 58.872 32.000 6.59 6.59 41.78 1.94
89 90 5.499139 TTTTAAAGCACTCTGGAACACTG 57.501 39.130 0.00 0.00 0.00 3.66
92 93 1.418334 AGCACTCTGGAACACTGACT 58.582 50.000 0.00 0.00 0.00 3.41
93 94 1.765314 AGCACTCTGGAACACTGACTT 59.235 47.619 0.00 0.00 0.00 3.01
94 95 2.171448 AGCACTCTGGAACACTGACTTT 59.829 45.455 0.00 0.00 0.00 2.66
95 96 2.945668 GCACTCTGGAACACTGACTTTT 59.054 45.455 0.00 0.00 0.00 2.27
113 114 1.961793 TTTTGTCCAGACCTTCACGG 58.038 50.000 0.00 0.00 39.35 4.94
114 115 1.124780 TTTGTCCAGACCTTCACGGA 58.875 50.000 0.00 0.00 36.31 4.69
115 116 1.348064 TTGTCCAGACCTTCACGGAT 58.652 50.000 0.00 0.00 36.31 4.18
116 117 0.608130 TGTCCAGACCTTCACGGATG 59.392 55.000 0.00 0.00 36.31 3.51
117 118 0.608640 GTCCAGACCTTCACGGATGT 59.391 55.000 0.00 0.00 36.31 3.06
118 119 0.895530 TCCAGACCTTCACGGATGTC 59.104 55.000 0.00 0.00 36.31 3.06
120 121 1.276421 CCAGACCTTCACGGATGTCTT 59.724 52.381 0.00 0.00 35.97 3.01
121 122 2.289694 CCAGACCTTCACGGATGTCTTT 60.290 50.000 0.00 0.00 35.97 2.52
123 124 2.028020 AGACCTTCACGGATGTCTTTCC 60.028 50.000 0.00 0.00 34.53 3.13
124 125 1.697432 ACCTTCACGGATGTCTTTCCA 59.303 47.619 0.00 0.00 35.34 3.53
125 126 2.305927 ACCTTCACGGATGTCTTTCCAT 59.694 45.455 0.00 0.00 35.34 3.41
126 127 3.244911 ACCTTCACGGATGTCTTTCCATT 60.245 43.478 0.00 0.00 35.34 3.16
127 128 4.019681 ACCTTCACGGATGTCTTTCCATTA 60.020 41.667 0.00 0.00 35.34 1.90
128 129 4.332819 CCTTCACGGATGTCTTTCCATTAC 59.667 45.833 0.00 0.00 35.34 1.89
129 130 3.517602 TCACGGATGTCTTTCCATTACG 58.482 45.455 0.00 0.00 35.34 3.18
130 131 3.193903 TCACGGATGTCTTTCCATTACGA 59.806 43.478 0.00 0.00 35.34 3.43
131 132 3.930229 CACGGATGTCTTTCCATTACGAA 59.070 43.478 0.00 0.00 35.34 3.85
132 133 4.390603 CACGGATGTCTTTCCATTACGAAA 59.609 41.667 0.00 0.00 35.34 3.46
133 134 4.390909 ACGGATGTCTTTCCATTACGAAAC 59.609 41.667 0.00 0.00 35.34 2.78
134 135 4.630069 CGGATGTCTTTCCATTACGAAACT 59.370 41.667 0.00 0.00 35.34 2.66
135 136 5.121768 CGGATGTCTTTCCATTACGAAACTT 59.878 40.000 0.00 0.00 35.34 2.66
136 137 6.311935 CGGATGTCTTTCCATTACGAAACTTA 59.688 38.462 0.00 0.00 35.34 2.24
137 138 7.011109 CGGATGTCTTTCCATTACGAAACTTAT 59.989 37.037 0.00 0.00 35.34 1.73
138 139 8.674607 GGATGTCTTTCCATTACGAAACTTATT 58.325 33.333 0.00 0.00 35.72 1.40
140 141 9.840427 ATGTCTTTCCATTACGAAACTTATTTG 57.160 29.630 0.00 0.00 0.00 2.32
141 142 7.806014 TGTCTTTCCATTACGAAACTTATTTGC 59.194 33.333 0.00 0.00 0.00 3.68
142 143 7.806014 GTCTTTCCATTACGAAACTTATTTGCA 59.194 33.333 0.00 0.00 0.00 4.08
144 145 8.459521 TTTCCATTACGAAACTTATTTGCATG 57.540 30.769 0.00 0.00 0.00 4.06
145 146 7.151999 TCCATTACGAAACTTATTTGCATGT 57.848 32.000 0.00 0.00 0.00 3.21
148 149 8.794406 CCATTACGAAACTTATTTGCATGTTAC 58.206 33.333 0.00 0.00 0.00 2.50
149 150 9.554724 CATTACGAAACTTATTTGCATGTTACT 57.445 29.630 0.00 0.00 0.00 2.24
153 154 9.953697 ACGAAACTTATTTGCATGTTACTAAAA 57.046 25.926 0.00 0.00 0.00 1.52
164 165 7.665690 TGCATGTTACTAAAACATTCAACCAT 58.334 30.769 0.74 0.00 38.69 3.55
165 166 7.598118 TGCATGTTACTAAAACATTCAACCATG 59.402 33.333 0.74 0.00 38.69 3.66
166 167 7.598493 GCATGTTACTAAAACATTCAACCATGT 59.402 33.333 0.74 0.00 38.69 3.21
178 179 9.612066 AACATTCAACCATGTTTGAAATTTACT 57.388 25.926 20.45 2.41 46.06 2.24
180 181 9.044150 CATTCAACCATGTTTGAAATTTACTGT 57.956 29.630 20.45 1.05 46.06 3.55
181 182 9.612066 ATTCAACCATGTTTGAAATTTACTGTT 57.388 25.926 20.45 0.38 46.06 3.16
182 183 8.641499 TCAACCATGTTTGAAATTTACTGTTC 57.359 30.769 2.80 0.00 32.42 3.18
187 188 8.090214 CCATGTTTGAAATTTACTGTTCATCCT 58.910 33.333 0.00 0.00 33.90 3.24
190 191 8.792633 TGTTTGAAATTTACTGTTCATCCTAGG 58.207 33.333 0.82 0.82 33.90 3.02
191 192 8.793592 GTTTGAAATTTACTGTTCATCCTAGGT 58.206 33.333 9.08 0.00 33.90 3.08
193 194 6.374333 TGAAATTTACTGTTCATCCTAGGTGC 59.626 38.462 9.08 0.00 0.00 5.01
195 196 5.435686 TTTACTGTTCATCCTAGGTGCAT 57.564 39.130 9.08 0.00 0.00 3.96
197 198 6.747414 TTACTGTTCATCCTAGGTGCATAT 57.253 37.500 9.08 0.00 0.00 1.78
198 199 4.965814 ACTGTTCATCCTAGGTGCATATG 58.034 43.478 9.08 4.83 0.00 1.78
199 200 3.743521 TGTTCATCCTAGGTGCATATGC 58.256 45.455 21.09 21.09 42.50 3.14
200 201 2.738846 GTTCATCCTAGGTGCATATGCG 59.261 50.000 22.21 7.81 45.83 4.73
218 219 2.420890 CCCAGGAGCAGAGCGATC 59.579 66.667 0.00 0.00 0.00 3.69
219 220 2.429767 CCCAGGAGCAGAGCGATCA 61.430 63.158 2.38 0.00 0.00 2.92
221 222 1.674764 CCAGGAGCAGAGCGATCACT 61.675 60.000 2.38 0.00 0.00 3.41
222 223 0.175302 CAGGAGCAGAGCGATCACTT 59.825 55.000 2.38 0.00 0.00 3.16
225 226 0.869454 GAGCAGAGCGATCACTTCCG 60.869 60.000 2.38 0.00 0.00 4.30
230 231 4.827481 GCGATCACTTCCGCCTAA 57.173 55.556 0.00 0.00 45.06 2.69
232 233 0.651031 GCGATCACTTCCGCCTAAAC 59.349 55.000 0.00 0.00 45.06 2.01
233 234 1.739371 GCGATCACTTCCGCCTAAACT 60.739 52.381 0.00 0.00 45.06 2.66
234 235 1.927174 CGATCACTTCCGCCTAAACTG 59.073 52.381 0.00 0.00 0.00 3.16
235 236 2.416836 CGATCACTTCCGCCTAAACTGA 60.417 50.000 0.00 0.00 0.00 3.41
237 238 1.689813 TCACTTCCGCCTAAACTGACA 59.310 47.619 0.00 0.00 0.00 3.58
239 240 3.074412 CACTTCCGCCTAAACTGACATT 58.926 45.455 0.00 0.00 0.00 2.71
242 243 3.695830 TCCGCCTAAACTGACATTTCT 57.304 42.857 0.00 0.00 0.00 2.52
244 245 4.394729 TCCGCCTAAACTGACATTTCTTT 58.605 39.130 0.00 0.00 0.00 2.52
246 247 4.215399 CCGCCTAAACTGACATTTCTTTCA 59.785 41.667 0.00 0.00 0.00 2.69
247 248 5.106157 CCGCCTAAACTGACATTTCTTTCAT 60.106 40.000 0.00 0.00 0.00 2.57
249 250 6.568462 CGCCTAAACTGACATTTCTTTCATGT 60.568 38.462 0.00 0.00 37.58 3.21
250 251 7.360861 CGCCTAAACTGACATTTCTTTCATGTA 60.361 37.037 0.00 0.00 34.89 2.29
251 252 7.965107 GCCTAAACTGACATTTCTTTCATGTAG 59.035 37.037 0.00 0.00 34.89 2.74
252 253 9.219603 CCTAAACTGACATTTCTTTCATGTAGA 57.780 33.333 0.00 0.00 34.89 2.59
255 256 8.682936 AACTGACATTTCTTTCATGTAGAAGT 57.317 30.769 11.11 7.46 37.57 3.01
256 257 9.778741 AACTGACATTTCTTTCATGTAGAAGTA 57.221 29.630 11.11 2.02 37.57 2.24
257 258 9.778741 ACTGACATTTCTTTCATGTAGAAGTAA 57.221 29.630 11.11 6.83 37.57 2.24
315 316 9.278978 GGTAATGTTACCCATTTTGATTTTTGT 57.721 29.630 10.24 0.00 45.94 2.83
318 319 8.744568 ATGTTACCCATTTTGATTTTTGTTGT 57.255 26.923 0.00 0.00 0.00 3.32
319 320 8.567285 TGTTACCCATTTTGATTTTTGTTGTT 57.433 26.923 0.00 0.00 0.00 2.83
321 322 6.356757 ACCCATTTTGATTTTTGTTGTTCG 57.643 33.333 0.00 0.00 0.00 3.95
323 324 6.257630 ACCCATTTTGATTTTTGTTGTTCGAG 59.742 34.615 0.00 0.00 0.00 4.04
325 326 7.171337 CCCATTTTGATTTTTGTTGTTCGAGAT 59.829 33.333 0.00 0.00 0.00 2.75
327 328 9.919348 CATTTTGATTTTTGTTGTTCGAGATTT 57.081 25.926 0.00 0.00 0.00 2.17
328 329 9.919348 ATTTTGATTTTTGTTGTTCGAGATTTG 57.081 25.926 0.00 0.00 0.00 2.32
329 330 6.509317 TGATTTTTGTTGTTCGAGATTTGC 57.491 33.333 0.00 0.00 0.00 3.68
330 331 6.272318 TGATTTTTGTTGTTCGAGATTTGCT 58.728 32.000 0.00 0.00 0.00 3.91
331 332 6.756074 TGATTTTTGTTGTTCGAGATTTGCTT 59.244 30.769 0.00 0.00 0.00 3.91
332 333 6.959671 TTTTTGTTGTTCGAGATTTGCTTT 57.040 29.167 0.00 0.00 0.00 3.51
333 334 5.947503 TTTGTTGTTCGAGATTTGCTTTG 57.052 34.783 0.00 0.00 0.00 2.77
335 336 5.242069 TGTTGTTCGAGATTTGCTTTGAA 57.758 34.783 0.00 0.00 0.00 2.69
336 337 5.830912 TGTTGTTCGAGATTTGCTTTGAAT 58.169 33.333 0.00 0.00 0.00 2.57
337 338 5.686841 TGTTGTTCGAGATTTGCTTTGAATG 59.313 36.000 0.00 0.00 0.00 2.67
338 339 4.797471 TGTTCGAGATTTGCTTTGAATGG 58.203 39.130 0.00 0.00 0.00 3.16
340 341 4.952262 TCGAGATTTGCTTTGAATGGAG 57.048 40.909 0.00 0.00 0.00 3.86
342 343 3.691118 CGAGATTTGCTTTGAATGGAGGA 59.309 43.478 0.00 0.00 0.00 3.71
344 345 5.397142 AGATTTGCTTTGAATGGAGGAAC 57.603 39.130 0.00 0.00 0.00 3.62
345 346 4.834496 AGATTTGCTTTGAATGGAGGAACA 59.166 37.500 0.00 0.00 0.00 3.18
349 350 5.549742 TGCTTTGAATGGAGGAACATTTT 57.450 34.783 0.00 0.00 40.92 1.82
352 353 6.183360 TGCTTTGAATGGAGGAACATTTTCTT 60.183 34.615 0.00 0.00 40.92 2.52
353 354 7.015098 TGCTTTGAATGGAGGAACATTTTCTTA 59.985 33.333 0.00 0.00 40.92 2.10
354 355 8.037166 GCTTTGAATGGAGGAACATTTTCTTAT 58.963 33.333 0.00 0.00 40.92 1.73
482 2783 7.068702 TGAATGGCAAATTAAGATGGACCTAT 58.931 34.615 0.00 0.00 0.00 2.57
498 2799 9.349713 GATGGACCTATATTTTTCATTGTGGTA 57.650 33.333 0.00 0.00 0.00 3.25
499 2800 9.707957 ATGGACCTATATTTTTCATTGTGGTAA 57.292 29.630 0.00 0.00 0.00 2.85
551 2874 7.894753 TGGAATTTGGCTCAATAATGTGATA 57.105 32.000 0.00 0.00 0.00 2.15
632 2955 2.811317 CAACAGCTCGCCGGAGTC 60.811 66.667 5.05 0.00 42.53 3.36
635 2969 4.056125 CAGCTCGCCGGAGTCACA 62.056 66.667 5.05 0.00 42.53 3.58
653 2987 3.929948 CCGCGCGATGCTTTCTCC 61.930 66.667 34.63 0.00 43.27 3.71
654 2988 3.188100 CGCGCGATGCTTTCTCCA 61.188 61.111 28.94 0.00 43.27 3.86
655 2989 2.401195 GCGCGATGCTTTCTCCAC 59.599 61.111 12.10 0.00 41.73 4.02
656 2990 2.697425 CGCGATGCTTTCTCCACG 59.303 61.111 0.00 0.00 0.00 4.94
657 2991 2.094659 CGCGATGCTTTCTCCACGT 61.095 57.895 0.00 0.00 0.00 4.49
658 2992 1.421485 GCGATGCTTTCTCCACGTG 59.579 57.895 9.08 9.08 0.00 4.49
659 2993 1.014044 GCGATGCTTTCTCCACGTGA 61.014 55.000 19.30 2.03 0.00 4.35
674 3008 1.375908 GTGAGCGAACCATGCAGGA 60.376 57.895 0.00 0.00 41.22 3.86
696 3030 3.244009 ACTCACTCACACACTTGATCCAG 60.244 47.826 0.00 0.00 0.00 3.86
710 3044 0.901124 ATCCAGTGAGCTGTCTCCAC 59.099 55.000 0.00 0.00 41.02 4.02
751 6425 1.174712 CCTGGCCACAAGTTCACAGG 61.175 60.000 0.00 0.00 39.45 4.00
766 6440 8.420222 CAAGTTCACAGGAATACTCATATCTCT 58.580 37.037 0.00 0.00 35.05 3.10
780 6454 4.586421 TCATATCTCTTGGCTCTCGATGTT 59.414 41.667 0.00 0.00 0.00 2.71
781 6455 5.770162 TCATATCTCTTGGCTCTCGATGTTA 59.230 40.000 0.00 0.00 0.00 2.41
784 6458 3.129462 TCTCTTGGCTCTCGATGTTACAG 59.871 47.826 0.00 0.00 0.00 2.74
795 6471 3.572682 TCGATGTTACAGGTGTTCTGAGT 59.427 43.478 0.00 0.00 46.18 3.41
866 6542 9.653516 TTCTCTCTATCCATCTTTATCTTGTCT 57.346 33.333 0.00 0.00 0.00 3.41
892 6571 9.304335 TGATTACACACTAAATCGATCCCTATA 57.696 33.333 0.00 0.00 35.32 1.31
901 6580 1.174783 CGATCCCTATACCACCTCCG 58.825 60.000 0.00 0.00 0.00 4.63
902 6581 1.271762 CGATCCCTATACCACCTCCGA 60.272 57.143 0.00 0.00 0.00 4.55
945 6628 3.577848 CCCCTCTCCTATCAAGTCATCTG 59.422 52.174 0.00 0.00 0.00 2.90
946 6629 3.577848 CCCTCTCCTATCAAGTCATCTGG 59.422 52.174 0.00 0.00 0.00 3.86
963 6648 0.036732 TGGACACACCCATCTCTTGC 59.963 55.000 0.00 0.00 38.00 4.01
975 6660 3.118112 CCATCTCTTGCAGAACCCATACT 60.118 47.826 0.00 0.00 33.62 2.12
989 6679 2.261345 CCATACTGCCAACATTTTGCG 58.739 47.619 0.00 0.00 0.00 4.85
1011 6701 0.958382 GCCTTACAATGGCGACCACA 60.958 55.000 0.50 0.00 41.03 4.17
1020 6710 1.302511 GGCGACCACAACCATGTCT 60.303 57.895 0.00 0.00 37.82 3.41
1064 6754 2.422597 CAAGGCGGTGAAGAATGTACA 58.577 47.619 0.00 0.00 0.00 2.90
1072 6762 4.171005 GGTGAAGAATGTACAATCGTCGA 58.829 43.478 18.12 0.00 0.00 4.20
1127 6818 3.635734 CTGCAGCGAAGGCGAAACG 62.636 63.158 0.00 0.00 46.35 3.60
1138 6829 0.037046 GGCGAAACGGGTTTCCTCTA 60.037 55.000 16.29 0.00 44.43 2.43
1368 9757 3.993584 TTACTCGCCCGCAACGGT 61.994 61.111 5.17 0.00 46.80 4.83
1401 9790 2.200337 GGCCGTTTGGTTCAAGGCT 61.200 57.895 4.73 0.00 46.44 4.58
1461 13533 2.852075 AACCCCAGCCTCGTCCAA 60.852 61.111 0.00 0.00 0.00 3.53
1488 13560 1.160137 GCATCCTAGCTATTTGGGCG 58.840 55.000 0.00 0.00 34.52 6.13
1503 13575 1.372499 GGCGTGTCAAGTCGTGCTA 60.372 57.895 0.00 0.00 0.00 3.49
1557 13629 1.501741 CCCACTTGGCGAAATCGTG 59.498 57.895 4.59 0.00 42.22 4.35
1623 13695 1.630126 ATGACCCTGAGGCATTCGCT 61.630 55.000 0.00 0.00 38.60 4.93
1680 13752 4.323417 TCGCTATGTTCTCAATGTTTGGT 58.677 39.130 0.00 0.00 0.00 3.67
1704 13776 3.006430 TCTTTGTCCAAGCTATCGTCACA 59.994 43.478 0.00 0.00 31.70 3.58
1764 13836 0.467290 ACCCCGTCAACAACAATGCT 60.467 50.000 0.00 0.00 0.00 3.79
1802 13874 2.351706 TTTGTTCCCGGCAAGTAAGT 57.648 45.000 0.00 0.00 0.00 2.24
1804 13876 3.488778 TTGTTCCCGGCAAGTAAGTTA 57.511 42.857 0.00 0.00 0.00 2.24
1813 13891 4.201822 CCGGCAAGTAAGTTATCTTGAAGC 60.202 45.833 20.24 10.71 42.22 3.86
1827 13905 2.519302 AAGCCTGTGCACACCACC 60.519 61.111 17.42 4.32 44.01 4.61
1837 13915 1.806568 CACACCACCAAGCGTGTTT 59.193 52.632 0.00 0.00 41.20 2.83
1838 13916 1.018148 CACACCACCAAGCGTGTTTA 58.982 50.000 0.00 0.00 41.20 2.01
1840 13918 2.034053 CACACCACCAAGCGTGTTTATT 59.966 45.455 0.00 0.00 41.20 1.40
1841 13919 2.034053 ACACCACCAAGCGTGTTTATTG 59.966 45.455 0.00 0.00 40.24 1.90
1842 13920 2.034053 CACCACCAAGCGTGTTTATTGT 59.966 45.455 0.00 0.00 41.26 2.71
1843 13921 3.251245 CACCACCAAGCGTGTTTATTGTA 59.749 43.478 0.00 0.00 41.26 2.41
1844 13922 3.251487 ACCACCAAGCGTGTTTATTGTAC 59.749 43.478 0.00 0.00 41.26 2.90
1845 13923 3.251245 CCACCAAGCGTGTTTATTGTACA 59.749 43.478 0.00 0.00 41.26 2.90
1935 14015 4.624015 CCTTCAATGTTGTGACTTGCATT 58.376 39.130 0.00 0.00 32.48 3.56
1957 14037 5.437289 TGATCTGACCATTTTGTTGTGAC 57.563 39.130 0.00 0.00 0.00 3.67
1958 14038 4.886489 TGATCTGACCATTTTGTTGTGACA 59.114 37.500 0.00 0.00 0.00 3.58
2009 14098 5.291293 ACTTTGTCACGCGCTTAATTAAT 57.709 34.783 5.73 0.00 0.00 1.40
2021 14110 8.493547 ACGCGCTTAATTAATTATTACTTCCTC 58.506 33.333 5.73 0.00 0.00 3.71
2022 14111 8.492748 CGCGCTTAATTAATTATTACTTCCTCA 58.507 33.333 5.56 0.00 0.00 3.86
2114 14204 3.833061 CGTTTGAGCGACAAGTAATTTCG 59.167 43.478 0.00 4.05 39.77 3.46
2122 14212 5.067413 AGCGACAAGTAATTTCGGATAGAGA 59.933 40.000 8.68 0.00 33.28 3.10
2143 15172 5.911752 AGAAAGTATCATACTGTGCTCAGG 58.088 41.667 19.27 2.79 45.14 3.86
2154 15183 1.417517 TGTGCTCAGGTGAGTGACAAT 59.582 47.619 8.74 0.00 43.85 2.71
2206 15235 2.427506 GAGCCTGAACGAAGGAAACAT 58.572 47.619 7.59 0.00 40.02 2.71
2259 15288 1.873698 TTGTGTTTACTCTCCACGCC 58.126 50.000 0.00 0.00 31.75 5.68
2263 15292 1.968493 TGTTTACTCTCCACGCCTTCT 59.032 47.619 0.00 0.00 0.00 2.85
2264 15293 2.367567 TGTTTACTCTCCACGCCTTCTT 59.632 45.455 0.00 0.00 0.00 2.52
2265 15294 3.181458 TGTTTACTCTCCACGCCTTCTTT 60.181 43.478 0.00 0.00 0.00 2.52
2266 15295 3.764237 TTACTCTCCACGCCTTCTTTT 57.236 42.857 0.00 0.00 0.00 2.27
2267 15296 2.640316 ACTCTCCACGCCTTCTTTTT 57.360 45.000 0.00 0.00 0.00 1.94
2283 15312 3.637184 TTTTTGCGGGGGTACTCTC 57.363 52.632 0.00 0.00 0.00 3.20
2284 15313 0.037160 TTTTTGCGGGGGTACTCTCC 59.963 55.000 0.00 0.00 0.00 3.71
2285 15314 1.128809 TTTTGCGGGGGTACTCTCCA 61.129 55.000 0.00 0.00 0.00 3.86
2286 15315 1.833787 TTTGCGGGGGTACTCTCCAC 61.834 60.000 0.00 0.00 0.00 4.02
2309 15338 2.167075 CCTTTGATCAAGGCAACCATCC 59.833 50.000 11.91 0.00 46.18 3.51
2325 15354 6.016777 GCAACCATCCGAAATGATCTCTATTT 60.017 38.462 0.00 0.00 0.00 1.40
2358 15387 4.122046 GTTGCAAGGGCCATGATTTATTC 58.878 43.478 13.93 0.00 40.13 1.75
2385 15414 8.557864 TCATTTCATAATTTGCAACAAAACAGG 58.442 29.630 0.00 0.00 0.00 4.00
2402 15431 4.230745 ACAGGGTGTGTCCAATTATACC 57.769 45.455 0.00 0.00 31.90 2.73
2470 15500 7.681939 TTTGGACAATTTAGAGACACATACC 57.318 36.000 0.00 0.00 0.00 2.73
2473 15503 6.177610 GGACAATTTAGAGACACATACCCAA 58.822 40.000 0.00 0.00 0.00 4.12
2474 15504 6.316390 GGACAATTTAGAGACACATACCCAAG 59.684 42.308 0.00 0.00 0.00 3.61
2475 15505 5.648092 ACAATTTAGAGACACATACCCAAGC 59.352 40.000 0.00 0.00 0.00 4.01
2481 15511 4.904251 AGAGACACATACCCAAGCATCTAT 59.096 41.667 0.00 0.00 0.00 1.98
2483 15513 5.615289 AGACACATACCCAAGCATCTATTC 58.385 41.667 0.00 0.00 0.00 1.75
2484 15514 4.718961 ACACATACCCAAGCATCTATTCC 58.281 43.478 0.00 0.00 0.00 3.01
2485 15515 4.165950 ACACATACCCAAGCATCTATTCCA 59.834 41.667 0.00 0.00 0.00 3.53
2486 15516 4.758674 CACATACCCAAGCATCTATTCCAG 59.241 45.833 0.00 0.00 0.00 3.86
2488 15518 3.853355 ACCCAAGCATCTATTCCAGAG 57.147 47.619 0.00 0.00 36.48 3.35
2489 15519 3.387962 ACCCAAGCATCTATTCCAGAGA 58.612 45.455 0.00 0.00 36.48 3.10
2491 15521 4.141528 ACCCAAGCATCTATTCCAGAGAAG 60.142 45.833 0.00 0.00 36.48 2.85
2492 15522 4.387598 CCAAGCATCTATTCCAGAGAAGG 58.612 47.826 0.00 0.00 36.48 3.46
2493 15523 4.141528 CCAAGCATCTATTCCAGAGAAGGT 60.142 45.833 0.00 0.00 36.48 3.50
2494 15524 5.435291 CAAGCATCTATTCCAGAGAAGGTT 58.565 41.667 0.00 0.00 36.48 3.50
2495 15525 5.707066 AGCATCTATTCCAGAGAAGGTTT 57.293 39.130 0.00 0.00 36.48 3.27
2496 15526 6.072199 AGCATCTATTCCAGAGAAGGTTTT 57.928 37.500 0.00 0.00 36.48 2.43
2497 15527 6.488715 AGCATCTATTCCAGAGAAGGTTTTT 58.511 36.000 0.00 0.00 36.48 1.94
2498 15528 6.376581 AGCATCTATTCCAGAGAAGGTTTTTG 59.623 38.462 0.00 0.00 36.48 2.44
2499 15529 6.558909 CATCTATTCCAGAGAAGGTTTTTGC 58.441 40.000 0.00 0.00 36.48 3.68
2500 15530 5.010282 TCTATTCCAGAGAAGGTTTTTGCC 58.990 41.667 0.00 0.00 34.86 4.52
2501 15531 1.995376 TCCAGAGAAGGTTTTTGCCC 58.005 50.000 0.00 0.00 0.00 5.36
2502 15532 1.499007 TCCAGAGAAGGTTTTTGCCCT 59.501 47.619 0.00 0.00 0.00 5.19
2503 15533 1.615392 CCAGAGAAGGTTTTTGCCCTG 59.385 52.381 0.00 0.00 30.99 4.45
2505 15535 2.555757 CAGAGAAGGTTTTTGCCCTGAG 59.444 50.000 0.00 0.00 30.99 3.35
2506 15536 2.443255 AGAGAAGGTTTTTGCCCTGAGA 59.557 45.455 0.00 0.00 30.99 3.27
2508 15538 3.829026 GAGAAGGTTTTTGCCCTGAGATT 59.171 43.478 0.00 0.00 30.99 2.40
2513 15543 1.549203 TTTTGCCCTGAGATTCAGCC 58.451 50.000 0.54 0.00 42.98 4.85
2515 15545 0.322816 TTGCCCTGAGATTCAGCCAC 60.323 55.000 0.54 0.00 42.98 5.01
2516 15546 1.203441 TGCCCTGAGATTCAGCCACT 61.203 55.000 0.54 0.00 42.98 4.00
2517 15547 0.034670 GCCCTGAGATTCAGCCACTT 60.035 55.000 0.54 0.00 42.98 3.16
2519 15549 1.681166 CCCTGAGATTCAGCCACTTGG 60.681 57.143 0.54 0.00 42.98 3.61
2520 15550 1.004044 CCTGAGATTCAGCCACTTGGT 59.996 52.381 0.54 0.00 42.98 3.67
2521 15551 2.553904 CCTGAGATTCAGCCACTTGGTT 60.554 50.000 0.54 0.00 42.98 3.67
2528 15558 3.205815 AGCCACTTGGTTGAAAGCA 57.794 47.368 0.00 0.00 37.57 3.91
2529 15559 1.484038 AGCCACTTGGTTGAAAGCAA 58.516 45.000 7.39 7.39 43.36 3.91
2539 15569 1.189752 TTGAAAGCAACTTGTGGGCA 58.810 45.000 0.00 0.00 0.00 5.36
2540 15570 1.412079 TGAAAGCAACTTGTGGGCAT 58.588 45.000 0.00 0.00 0.00 4.40
2541 15571 1.761784 TGAAAGCAACTTGTGGGCATT 59.238 42.857 0.00 0.00 0.00 3.56
2542 15572 2.170187 TGAAAGCAACTTGTGGGCATTT 59.830 40.909 0.00 0.00 0.00 2.32
2543 15573 2.531522 AAGCAACTTGTGGGCATTTC 57.468 45.000 0.00 0.00 0.00 2.17
2544 15574 0.681175 AGCAACTTGTGGGCATTTCC 59.319 50.000 0.00 0.00 0.00 3.13
2545 15575 0.681175 GCAACTTGTGGGCATTTCCT 59.319 50.000 0.00 0.00 34.39 3.36
2546 15576 1.070601 GCAACTTGTGGGCATTTCCTT 59.929 47.619 0.00 0.00 34.39 3.36
2547 15577 2.485302 GCAACTTGTGGGCATTTCCTTT 60.485 45.455 0.00 0.00 34.39 3.11
2548 15578 3.392882 CAACTTGTGGGCATTTCCTTTC 58.607 45.455 0.00 0.00 34.39 2.62
2549 15579 2.962859 ACTTGTGGGCATTTCCTTTCT 58.037 42.857 0.00 0.00 34.39 2.52
2550 15580 3.308401 ACTTGTGGGCATTTCCTTTCTT 58.692 40.909 0.00 0.00 34.39 2.52
2551 15581 3.070015 ACTTGTGGGCATTTCCTTTCTTG 59.930 43.478 0.00 0.00 34.39 3.02
2553 15583 2.627699 TGTGGGCATTTCCTTTCTTGAC 59.372 45.455 0.00 0.00 34.39 3.18
2554 15584 2.627699 GTGGGCATTTCCTTTCTTGACA 59.372 45.455 0.00 0.00 34.39 3.58
2560 15590 5.048083 GGCATTTCCTTTCTTGACACATGTA 60.048 40.000 0.00 0.00 0.00 2.29
2561 15591 6.350445 GGCATTTCCTTTCTTGACACATGTAT 60.350 38.462 0.00 0.00 0.00 2.29
2562 15592 7.092716 GCATTTCCTTTCTTGACACATGTATT 58.907 34.615 0.00 0.00 0.00 1.89
2563 15593 8.243426 GCATTTCCTTTCTTGACACATGTATTA 58.757 33.333 0.00 0.00 0.00 0.98
2564 15594 9.559958 CATTTCCTTTCTTGACACATGTATTAC 57.440 33.333 0.00 0.00 0.00 1.89
2565 15595 8.918202 TTTCCTTTCTTGACACATGTATTACT 57.082 30.769 0.00 0.00 0.00 2.24
2566 15596 8.918202 TTCCTTTCTTGACACATGTATTACTT 57.082 30.769 0.00 0.00 0.00 2.24
2567 15597 8.918202 TCCTTTCTTGACACATGTATTACTTT 57.082 30.769 0.00 0.00 0.00 2.66
2568 15598 8.783093 TCCTTTCTTGACACATGTATTACTTTG 58.217 33.333 0.00 0.00 0.00 2.77
2569 15599 8.023128 CCTTTCTTGACACATGTATTACTTTGG 58.977 37.037 0.00 0.00 0.00 3.28
2571 15601 6.774673 TCTTGACACATGTATTACTTTGGGA 58.225 36.000 0.00 0.00 0.00 4.37
2572 15602 7.402054 TCTTGACACATGTATTACTTTGGGAT 58.598 34.615 0.00 0.00 0.00 3.85
2573 15603 8.544622 TCTTGACACATGTATTACTTTGGGATA 58.455 33.333 0.00 0.00 0.00 2.59
2574 15604 9.342308 CTTGACACATGTATTACTTTGGGATAT 57.658 33.333 0.00 0.00 0.00 1.63
2575 15605 8.675705 TGACACATGTATTACTTTGGGATATG 57.324 34.615 0.00 0.00 0.00 1.78
2576 15606 7.719193 TGACACATGTATTACTTTGGGATATGG 59.281 37.037 0.00 0.00 0.00 2.74
2577 15607 7.582719 ACACATGTATTACTTTGGGATATGGT 58.417 34.615 0.00 0.00 0.00 3.55
2578 15608 7.502226 ACACATGTATTACTTTGGGATATGGTG 59.498 37.037 0.00 0.00 0.00 4.17
2580 15610 5.947663 TGTATTACTTTGGGATATGGTGGG 58.052 41.667 0.00 0.00 0.00 4.61
2581 15611 3.963476 TTACTTTGGGATATGGTGGGG 57.037 47.619 0.00 0.00 0.00 4.96
2582 15612 1.693799 ACTTTGGGATATGGTGGGGT 58.306 50.000 0.00 0.00 0.00 4.95
2584 15614 2.783510 ACTTTGGGATATGGTGGGGTAG 59.216 50.000 0.00 0.00 0.00 3.18
2585 15615 2.899906 TTGGGATATGGTGGGGTAGA 57.100 50.000 0.00 0.00 0.00 2.59
2586 15616 2.899906 TGGGATATGGTGGGGTAGAA 57.100 50.000 0.00 0.00 0.00 2.10
2588 15618 2.781174 TGGGATATGGTGGGGTAGAAAC 59.219 50.000 0.00 0.00 0.00 2.78
2589 15619 2.107726 GGGATATGGTGGGGTAGAAACC 59.892 54.545 0.00 0.00 45.97 3.27
2599 15629 1.084289 GGTAGAAACCGATGTGTGGC 58.916 55.000 0.00 0.00 35.62 5.01
2600 15630 1.338769 GGTAGAAACCGATGTGTGGCT 60.339 52.381 0.00 0.00 35.62 4.75
2601 15631 1.732259 GTAGAAACCGATGTGTGGCTG 59.268 52.381 0.00 0.00 0.00 4.85
2603 15633 0.238289 GAAACCGATGTGTGGCTGTG 59.762 55.000 0.00 0.00 0.00 3.66
2604 15634 0.465460 AAACCGATGTGTGGCTGTGT 60.465 50.000 0.00 0.00 0.00 3.72
2605 15635 1.165907 AACCGATGTGTGGCTGTGTG 61.166 55.000 0.00 0.00 0.00 3.82
2606 15636 1.597854 CCGATGTGTGGCTGTGTGT 60.598 57.895 0.00 0.00 0.00 3.72
2608 15638 0.662619 CGATGTGTGGCTGTGTGTTT 59.337 50.000 0.00 0.00 0.00 2.83
2609 15639 1.065401 CGATGTGTGGCTGTGTGTTTT 59.935 47.619 0.00 0.00 0.00 2.43
2610 15640 2.479389 CGATGTGTGGCTGTGTGTTTTT 60.479 45.455 0.00 0.00 0.00 1.94
2611 15641 2.360553 TGTGTGGCTGTGTGTTTTTG 57.639 45.000 0.00 0.00 0.00 2.44
2612 15642 1.889170 TGTGTGGCTGTGTGTTTTTGA 59.111 42.857 0.00 0.00 0.00 2.69
2614 15644 3.056250 TGTGTGGCTGTGTGTTTTTGATT 60.056 39.130 0.00 0.00 0.00 2.57
2616 15646 3.194329 TGTGGCTGTGTGTTTTTGATTCA 59.806 39.130 0.00 0.00 0.00 2.57
2617 15647 4.180057 GTGGCTGTGTGTTTTTGATTCAA 58.820 39.130 0.00 0.00 0.00 2.69
2618 15648 4.629200 GTGGCTGTGTGTTTTTGATTCAAA 59.371 37.500 7.74 7.74 0.00 2.69
2619 15649 5.294060 GTGGCTGTGTGTTTTTGATTCAAAT 59.706 36.000 12.39 0.00 33.19 2.32
2620 15650 5.879223 TGGCTGTGTGTTTTTGATTCAAATT 59.121 32.000 12.39 0.00 33.19 1.82
2621 15651 6.373774 TGGCTGTGTGTTTTTGATTCAAATTT 59.626 30.769 12.39 0.00 33.19 1.82
2643 15673 6.752335 TTTTTGAACTTCATTGCTTCATCG 57.248 33.333 0.00 0.00 0.00 3.84
2645 15675 3.076621 TGAACTTCATTGCTTCATCGCT 58.923 40.909 0.00 0.00 0.00 4.93
2647 15677 2.430465 ACTTCATTGCTTCATCGCTGT 58.570 42.857 0.00 0.00 0.00 4.40
2649 15679 1.812235 TCATTGCTTCATCGCTGTGT 58.188 45.000 0.00 0.00 0.00 3.72
2650 15680 2.971307 TCATTGCTTCATCGCTGTGTA 58.029 42.857 0.00 0.00 0.00 2.90
2651 15681 2.931969 TCATTGCTTCATCGCTGTGTAG 59.068 45.455 0.00 0.00 0.00 2.74
2652 15682 2.455674 TTGCTTCATCGCTGTGTAGT 57.544 45.000 0.00 0.00 0.00 2.73
2653 15683 2.455674 TGCTTCATCGCTGTGTAGTT 57.544 45.000 0.00 0.00 0.00 2.24
2654 15684 3.586100 TGCTTCATCGCTGTGTAGTTA 57.414 42.857 0.00 0.00 0.00 2.24
2655 15685 4.123497 TGCTTCATCGCTGTGTAGTTAT 57.877 40.909 0.00 0.00 0.00 1.89
2657 15687 4.329801 TGCTTCATCGCTGTGTAGTTATTG 59.670 41.667 0.00 0.00 0.00 1.90
2658 15688 4.260375 GCTTCATCGCTGTGTAGTTATTGG 60.260 45.833 0.00 0.00 0.00 3.16
2660 15690 2.684001 TCGCTGTGTAGTTATTGGGG 57.316 50.000 0.00 0.00 0.00 4.96
2662 15692 2.006888 CGCTGTGTAGTTATTGGGGTG 58.993 52.381 0.00 0.00 0.00 4.61
2664 15694 2.944094 GCTGTGTAGTTATTGGGGTGGG 60.944 54.545 0.00 0.00 0.00 4.61
2666 15696 2.306512 TGTGTAGTTATTGGGGTGGGTC 59.693 50.000 0.00 0.00 0.00 4.46
2667 15697 2.574824 GTGTAGTTATTGGGGTGGGTCT 59.425 50.000 0.00 0.00 0.00 3.85
2668 15698 3.776417 GTGTAGTTATTGGGGTGGGTCTA 59.224 47.826 0.00 0.00 0.00 2.59
2669 15699 4.035112 TGTAGTTATTGGGGTGGGTCTAG 58.965 47.826 0.00 0.00 0.00 2.43
2671 15701 1.562475 GTTATTGGGGTGGGTCTAGCA 59.438 52.381 0.00 0.00 0.00 3.49
2673 15703 1.308877 ATTGGGGTGGGTCTAGCAAT 58.691 50.000 0.00 0.00 0.00 3.56
2674 15704 1.080638 TTGGGGTGGGTCTAGCAATT 58.919 50.000 0.00 0.00 0.00 2.32
2675 15705 1.080638 TGGGGTGGGTCTAGCAATTT 58.919 50.000 0.00 0.00 0.00 1.82
2677 15707 2.100197 GGGGTGGGTCTAGCAATTTTC 58.900 52.381 0.00 0.00 0.00 2.29
2678 15708 2.291605 GGGGTGGGTCTAGCAATTTTCT 60.292 50.000 0.00 0.00 0.00 2.52
2679 15709 2.755103 GGGTGGGTCTAGCAATTTTCTG 59.245 50.000 0.00 0.00 0.00 3.02
2683 15713 2.159517 GGGTCTAGCAATTTTCTGTGCG 60.160 50.000 0.00 0.00 45.62 5.34
2685 15715 3.375299 GGTCTAGCAATTTTCTGTGCGAT 59.625 43.478 0.00 0.00 45.62 4.58
2690 16199 2.598589 CAATTTTCTGTGCGATGTGGG 58.401 47.619 0.00 0.00 0.00 4.61
2693 16202 0.107643 TTTCTGTGCGATGTGGGACA 59.892 50.000 0.00 0.00 36.76 4.02
2694 16203 0.324614 TTCTGTGCGATGTGGGACAT 59.675 50.000 0.00 0.00 44.52 3.06
2695 16204 0.324614 TCTGTGCGATGTGGGACATT 59.675 50.000 0.00 0.00 44.52 2.71
2701 16210 3.190535 GTGCGATGTGGGACATTACTTTT 59.809 43.478 0.00 0.00 44.52 2.27
2702 16211 3.190327 TGCGATGTGGGACATTACTTTTG 59.810 43.478 0.00 0.00 44.52 2.44
2705 16214 3.237268 TGTGGGACATTACTTTTGCCT 57.763 42.857 0.00 0.00 44.52 4.75
2707 16216 3.320541 TGTGGGACATTACTTTTGCCTTG 59.679 43.478 0.00 0.00 44.52 3.61
2713 16222 4.309099 ACATTACTTTTGCCTTGCATGTG 58.691 39.130 0.00 0.00 38.76 3.21
2715 16224 2.228138 ACTTTTGCCTTGCATGTGTG 57.772 45.000 0.00 0.00 38.76 3.82
2725 16234 2.202557 CATGTGTGCTGCATGGCG 60.203 61.111 5.27 0.00 39.82 5.69
2726 16235 2.674033 ATGTGTGCTGCATGGCGT 60.674 55.556 5.27 0.00 34.52 5.68
2727 16236 2.693762 ATGTGTGCTGCATGGCGTC 61.694 57.895 5.27 0.00 34.52 5.19
2728 16237 4.450122 GTGTGCTGCATGGCGTCG 62.450 66.667 5.27 0.00 34.52 5.12
2730 16239 2.813474 GTGCTGCATGGCGTCGTA 60.813 61.111 5.27 0.00 34.52 3.43
2732 16241 2.509336 GCTGCATGGCGTCGTAGT 60.509 61.111 0.00 0.00 0.00 2.73
2735 16244 0.735978 CTGCATGGCGTCGTAGTTGA 60.736 55.000 0.00 0.00 0.00 3.18
2737 16246 1.006832 GCATGGCGTCGTAGTTGATT 58.993 50.000 0.00 0.00 0.00 2.57
2738 16247 1.396996 GCATGGCGTCGTAGTTGATTT 59.603 47.619 0.00 0.00 0.00 2.17
2739 16248 2.787723 GCATGGCGTCGTAGTTGATTTG 60.788 50.000 0.00 0.00 0.00 2.32
2740 16249 2.442212 TGGCGTCGTAGTTGATTTGA 57.558 45.000 0.00 0.00 0.00 2.69
2742 16251 2.927477 TGGCGTCGTAGTTGATTTGATC 59.073 45.455 0.00 0.00 0.00 2.92
2743 16252 2.927477 GGCGTCGTAGTTGATTTGATCA 59.073 45.455 0.00 0.00 37.55 2.92
2744 16253 3.241995 GGCGTCGTAGTTGATTTGATCAC 60.242 47.826 0.00 0.00 39.39 3.06
2746 16255 3.606777 CGTCGTAGTTGATTTGATCACGT 59.393 43.478 0.00 0.00 39.39 4.49
2748 16257 5.053221 CGTCGTAGTTGATTTGATCACGTAG 60.053 44.000 0.00 0.00 39.39 3.51
2750 16259 6.307318 GTCGTAGTTGATTTGATCACGTAGTT 59.693 38.462 0.00 0.00 41.61 2.24
2751 16260 6.864685 TCGTAGTTGATTTGATCACGTAGTTT 59.135 34.615 0.00 0.00 41.61 2.66
2753 16262 8.311822 CGTAGTTGATTTGATCACGTAGTTTAG 58.688 37.037 0.00 0.00 41.61 1.85
2754 16263 9.136952 GTAGTTGATTTGATCACGTAGTTTAGT 57.863 33.333 0.00 0.00 41.61 2.24
2755 16264 8.603242 AGTTGATTTGATCACGTAGTTTAGTT 57.397 30.769 0.00 0.00 41.61 2.24
2757 16266 9.659830 GTTGATTTGATCACGTAGTTTAGTTTT 57.340 29.630 0.00 0.00 41.61 2.43
2758 16267 9.658475 TTGATTTGATCACGTAGTTTAGTTTTG 57.342 29.630 0.00 0.00 41.61 2.44
2759 16268 8.832521 TGATTTGATCACGTAGTTTAGTTTTGT 58.167 29.630 0.00 0.00 41.61 2.83
2760 16269 9.314501 GATTTGATCACGTAGTTTAGTTTTGTC 57.685 33.333 0.00 0.00 41.61 3.18
2762 16271 5.403166 TGATCACGTAGTTTAGTTTTGTCCG 59.597 40.000 0.00 0.00 41.61 4.79
2763 16272 3.490526 TCACGTAGTTTAGTTTTGTCCGC 59.509 43.478 0.00 0.00 41.61 5.54
2765 16274 4.025480 CACGTAGTTTAGTTTTGTCCGCTT 60.025 41.667 0.00 0.00 41.61 4.68
2766 16275 4.571984 ACGTAGTTTAGTTTTGTCCGCTTT 59.428 37.500 0.00 0.00 37.78 3.51
2767 16276 5.135330 CGTAGTTTAGTTTTGTCCGCTTTC 58.865 41.667 0.00 0.00 0.00 2.62
2768 16277 5.050567 CGTAGTTTAGTTTTGTCCGCTTTCT 60.051 40.000 0.00 0.00 0.00 2.52
2769 16278 5.169836 AGTTTAGTTTTGTCCGCTTTCTG 57.830 39.130 0.00 0.00 0.00 3.02
2770 16279 4.036380 AGTTTAGTTTTGTCCGCTTTCTGG 59.964 41.667 0.00 0.00 0.00 3.86
2771 16280 2.052782 AGTTTTGTCCGCTTTCTGGT 57.947 45.000 0.00 0.00 0.00 4.00
2772 16281 2.375146 AGTTTTGTCCGCTTTCTGGTT 58.625 42.857 0.00 0.00 0.00 3.67
2773 16282 2.099098 AGTTTTGTCCGCTTTCTGGTTG 59.901 45.455 0.00 0.00 0.00 3.77
2774 16283 1.028905 TTTGTCCGCTTTCTGGTTGG 58.971 50.000 0.00 0.00 0.00 3.77
2776 16285 0.400213 TGTCCGCTTTCTGGTTGGAT 59.600 50.000 0.00 0.00 0.00 3.41
2777 16286 0.804989 GTCCGCTTTCTGGTTGGATG 59.195 55.000 0.00 0.00 0.00 3.51
2780 16289 1.683011 CCGCTTTCTGGTTGGATGGAT 60.683 52.381 0.00 0.00 0.00 3.41
2781 16290 2.094675 CGCTTTCTGGTTGGATGGATT 58.905 47.619 0.00 0.00 0.00 3.01
2782 16291 2.493278 CGCTTTCTGGTTGGATGGATTT 59.507 45.455 0.00 0.00 0.00 2.17
2783 16292 3.674138 CGCTTTCTGGTTGGATGGATTTG 60.674 47.826 0.00 0.00 0.00 2.32
2784 16293 3.259123 GCTTTCTGGTTGGATGGATTTGT 59.741 43.478 0.00 0.00 0.00 2.83
2785 16294 4.813027 CTTTCTGGTTGGATGGATTTGTG 58.187 43.478 0.00 0.00 0.00 3.33
2786 16295 2.806434 TCTGGTTGGATGGATTTGTGG 58.194 47.619 0.00 0.00 0.00 4.17
2787 16296 1.826720 CTGGTTGGATGGATTTGTGGG 59.173 52.381 0.00 0.00 0.00 4.61
2788 16297 0.536724 GGTTGGATGGATTTGTGGGC 59.463 55.000 0.00 0.00 0.00 5.36
2789 16298 1.560505 GTTGGATGGATTTGTGGGCT 58.439 50.000 0.00 0.00 0.00 5.19
2790 16299 1.205417 GTTGGATGGATTTGTGGGCTG 59.795 52.381 0.00 0.00 0.00 4.85
2791 16300 0.324552 TGGATGGATTTGTGGGCTGG 60.325 55.000 0.00 0.00 0.00 4.85
2794 16303 0.974010 ATGGATTTGTGGGCTGGCTG 60.974 55.000 0.00 0.00 0.00 4.85
2795 16304 2.575461 GATTTGTGGGCTGGCTGC 59.425 61.111 7.96 7.96 41.94 5.25
2796 16305 1.980772 GATTTGTGGGCTGGCTGCT 60.981 57.895 16.14 0.00 42.39 4.24
2800 16309 1.336632 TTGTGGGCTGGCTGCTTTTT 61.337 50.000 16.14 0.00 42.39 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 6.496565 TCCATGAATGATTTTTACCACCAACT 59.503 34.615 0.00 0.00 0.00 3.16
6 7 6.696411 TCCATGAATGATTTTTACCACCAAC 58.304 36.000 0.00 0.00 0.00 3.77
7 8 6.070881 CCTCCATGAATGATTTTTACCACCAA 60.071 38.462 0.00 0.00 0.00 3.67
8 9 5.421693 CCTCCATGAATGATTTTTACCACCA 59.578 40.000 0.00 0.00 0.00 4.17
10 11 6.378280 AGACCTCCATGAATGATTTTTACCAC 59.622 38.462 0.00 0.00 0.00 4.16
11 12 6.377996 CAGACCTCCATGAATGATTTTTACCA 59.622 38.462 0.00 0.00 0.00 3.25
12 13 6.183360 CCAGACCTCCATGAATGATTTTTACC 60.183 42.308 0.00 0.00 0.00 2.85
13 14 6.603201 TCCAGACCTCCATGAATGATTTTTAC 59.397 38.462 0.00 0.00 0.00 2.01
14 15 6.730447 TCCAGACCTCCATGAATGATTTTTA 58.270 36.000 0.00 0.00 0.00 1.52
15 16 5.582953 TCCAGACCTCCATGAATGATTTTT 58.417 37.500 0.00 0.00 0.00 1.94
17 18 4.476113 TCTCCAGACCTCCATGAATGATTT 59.524 41.667 0.00 0.00 0.00 2.17
19 20 3.662078 TCTCCAGACCTCCATGAATGAT 58.338 45.455 0.00 0.00 0.00 2.45
21 22 3.920231 TTCTCCAGACCTCCATGAATG 57.080 47.619 0.00 0.00 0.00 2.67
22 23 4.107072 TCTTTCTCCAGACCTCCATGAAT 58.893 43.478 0.00 0.00 0.00 2.57
24 25 3.190383 TCTTTCTCCAGACCTCCATGA 57.810 47.619 0.00 0.00 0.00 3.07
27 28 3.260269 TCTTCTTTCTCCAGACCTCCA 57.740 47.619 0.00 0.00 0.00 3.86
28 29 3.517500 ACATCTTCTTTCTCCAGACCTCC 59.482 47.826 0.00 0.00 0.00 4.30
29 30 4.817318 ACATCTTCTTTCTCCAGACCTC 57.183 45.455 0.00 0.00 0.00 3.85
30 31 4.019771 GGAACATCTTCTTTCTCCAGACCT 60.020 45.833 0.00 0.00 0.00 3.85
31 32 4.257731 GGAACATCTTCTTTCTCCAGACC 58.742 47.826 0.00 0.00 0.00 3.85
32 33 4.899502 TGGAACATCTTCTTTCTCCAGAC 58.100 43.478 0.00 0.00 0.00 3.51
33 34 5.567037 TTGGAACATCTTCTTTCTCCAGA 57.433 39.130 0.00 0.00 39.30 3.86
34 35 6.639632 TTTTGGAACATCTTCTTTCTCCAG 57.360 37.500 0.00 0.00 39.30 3.86
35 36 6.040842 CCTTTTTGGAACATCTTCTTTCTCCA 59.959 38.462 0.00 0.00 39.30 3.86
37 38 6.450545 CCCTTTTTGGAACATCTTCTTTCTC 58.549 40.000 0.00 0.00 39.30 2.87
39 40 4.991056 GCCCTTTTTGGAACATCTTCTTTC 59.009 41.667 0.00 0.00 39.30 2.62
40 41 4.408596 TGCCCTTTTTGGAACATCTTCTTT 59.591 37.500 0.00 0.00 39.30 2.52
41 42 3.966665 TGCCCTTTTTGGAACATCTTCTT 59.033 39.130 0.00 0.00 39.30 2.52
43 44 4.335400 TTGCCCTTTTTGGAACATCTTC 57.665 40.909 0.00 0.00 39.30 2.87
44 45 4.980339 ATTGCCCTTTTTGGAACATCTT 57.020 36.364 0.00 0.00 39.30 2.40
45 46 4.980339 AATTGCCCTTTTTGGAACATCT 57.020 36.364 0.00 0.00 39.30 2.90
46 47 6.389830 AAAAATTGCCCTTTTTGGAACATC 57.610 33.333 5.54 0.00 39.30 3.06
66 67 5.650266 TCAGTGTTCCAGAGTGCTTTAAAAA 59.350 36.000 0.00 0.00 0.00 1.94
67 68 5.065988 GTCAGTGTTCCAGAGTGCTTTAAAA 59.934 40.000 0.00 0.00 0.00 1.52
69 70 4.127171 GTCAGTGTTCCAGAGTGCTTTAA 58.873 43.478 0.00 0.00 0.00 1.52
71 72 2.171448 AGTCAGTGTTCCAGAGTGCTTT 59.829 45.455 0.00 0.00 0.00 3.51
72 73 1.765314 AGTCAGTGTTCCAGAGTGCTT 59.235 47.619 0.00 0.00 0.00 3.91
74 75 2.246719 AAGTCAGTGTTCCAGAGTGC 57.753 50.000 0.00 0.00 0.00 4.40
93 94 2.092861 TCCGTGAAGGTCTGGACAAAAA 60.093 45.455 3.10 0.00 41.99 1.94
94 95 1.487142 TCCGTGAAGGTCTGGACAAAA 59.513 47.619 3.10 0.00 41.99 2.44
95 96 1.124780 TCCGTGAAGGTCTGGACAAA 58.875 50.000 3.10 0.00 41.99 2.83
97 98 0.608130 CATCCGTGAAGGTCTGGACA 59.392 55.000 3.10 0.00 41.99 4.02
99 100 0.895530 GACATCCGTGAAGGTCTGGA 59.104 55.000 0.00 0.00 41.99 3.86
100 101 0.898320 AGACATCCGTGAAGGTCTGG 59.102 55.000 0.00 0.00 39.04 3.86
101 102 2.751166 AAGACATCCGTGAAGGTCTG 57.249 50.000 0.00 0.00 40.29 3.51
102 103 2.028020 GGAAAGACATCCGTGAAGGTCT 60.028 50.000 0.00 0.00 42.08 3.85
103 104 2.289444 TGGAAAGACATCCGTGAAGGTC 60.289 50.000 0.00 0.00 42.76 3.85
104 105 1.697432 TGGAAAGACATCCGTGAAGGT 59.303 47.619 0.00 0.00 42.76 3.50
105 106 2.472695 TGGAAAGACATCCGTGAAGG 57.527 50.000 0.00 0.00 42.76 3.46
106 107 4.032900 CGTAATGGAAAGACATCCGTGAAG 59.967 45.833 0.00 0.00 42.76 3.02
108 109 3.193903 TCGTAATGGAAAGACATCCGTGA 59.806 43.478 0.00 0.00 42.76 4.35
110 111 3.880047 TCGTAATGGAAAGACATCCGT 57.120 42.857 0.00 0.00 42.76 4.69
111 112 4.630069 AGTTTCGTAATGGAAAGACATCCG 59.370 41.667 0.00 0.00 42.76 4.18
112 113 6.496338 AAGTTTCGTAATGGAAAGACATCC 57.504 37.500 0.00 0.00 36.64 3.51
114 115 9.840427 CAAATAAGTTTCGTAATGGAAAGACAT 57.160 29.630 0.00 0.00 36.64 3.06
115 116 7.806014 GCAAATAAGTTTCGTAATGGAAAGACA 59.194 33.333 0.00 0.00 36.64 3.41
116 117 7.806014 TGCAAATAAGTTTCGTAATGGAAAGAC 59.194 33.333 0.00 0.00 36.64 3.01
117 118 7.877003 TGCAAATAAGTTTCGTAATGGAAAGA 58.123 30.769 0.00 0.00 36.64 2.52
118 119 8.586273 CATGCAAATAAGTTTCGTAATGGAAAG 58.414 33.333 0.00 0.00 36.64 2.62
120 121 7.598278 ACATGCAAATAAGTTTCGTAATGGAA 58.402 30.769 0.00 0.00 0.00 3.53
121 122 7.151999 ACATGCAAATAAGTTTCGTAATGGA 57.848 32.000 0.00 0.00 0.00 3.41
123 124 9.554724 AGTAACATGCAAATAAGTTTCGTAATG 57.445 29.630 0.00 0.00 0.00 1.90
127 128 9.953697 TTTTAGTAACATGCAAATAAGTTTCGT 57.046 25.926 0.00 0.00 0.00 3.85
139 140 7.043961 TGGTTGAATGTTTTAGTAACATGCA 57.956 32.000 7.12 7.12 42.73 3.96
140 141 7.598493 ACATGGTTGAATGTTTTAGTAACATGC 59.402 33.333 4.10 3.19 40.43 4.06
141 142 9.474920 AACATGGTTGAATGTTTTAGTAACATG 57.525 29.630 4.10 0.00 46.19 3.21
153 154 9.044150 CAGTAAATTTCAAACATGGTTGAATGT 57.956 29.630 33.37 23.67 44.71 2.71
157 158 8.253810 TGAACAGTAAATTTCAAACATGGTTGA 58.746 29.630 22.25 22.25 35.72 3.18
158 159 8.417780 TGAACAGTAAATTTCAAACATGGTTG 57.582 30.769 17.74 17.74 0.00 3.77
159 160 9.260002 GATGAACAGTAAATTTCAAACATGGTT 57.740 29.630 0.00 0.00 35.42 3.67
160 161 7.872483 GGATGAACAGTAAATTTCAAACATGGT 59.128 33.333 0.00 0.00 35.42 3.55
161 162 8.090214 AGGATGAACAGTAAATTTCAAACATGG 58.910 33.333 0.00 0.00 35.42 3.66
164 165 8.792633 CCTAGGATGAACAGTAAATTTCAAACA 58.207 33.333 1.05 0.00 35.42 2.83
165 166 8.793592 ACCTAGGATGAACAGTAAATTTCAAAC 58.206 33.333 17.98 0.00 35.42 2.93
166 167 8.792633 CACCTAGGATGAACAGTAAATTTCAAA 58.207 33.333 17.98 0.00 35.42 2.69
167 168 7.094377 GCACCTAGGATGAACAGTAAATTTCAA 60.094 37.037 17.98 0.00 35.42 2.69
168 169 6.374333 GCACCTAGGATGAACAGTAAATTTCA 59.626 38.462 17.98 0.00 36.21 2.69
169 170 6.374333 TGCACCTAGGATGAACAGTAAATTTC 59.626 38.462 17.98 0.00 0.00 2.17
170 171 6.245408 TGCACCTAGGATGAACAGTAAATTT 58.755 36.000 17.98 0.00 0.00 1.82
172 173 5.435686 TGCACCTAGGATGAACAGTAAAT 57.564 39.130 17.98 0.00 0.00 1.40
173 174 4.901197 TGCACCTAGGATGAACAGTAAA 57.099 40.909 17.98 0.00 0.00 2.01
174 175 6.524734 CATATGCACCTAGGATGAACAGTAA 58.475 40.000 17.98 0.00 0.00 2.24
175 176 5.511373 GCATATGCACCTAGGATGAACAGTA 60.511 44.000 22.84 0.00 41.59 2.74
176 177 4.744867 GCATATGCACCTAGGATGAACAGT 60.745 45.833 22.84 0.00 41.59 3.55
177 178 3.750130 GCATATGCACCTAGGATGAACAG 59.250 47.826 22.84 1.40 41.59 3.16
178 179 3.743521 GCATATGCACCTAGGATGAACA 58.256 45.455 22.84 6.11 41.59 3.18
180 181 2.871637 GCGCATATGCACCTAGGATGAA 60.872 50.000 26.52 5.05 42.21 2.57
181 182 1.338105 GCGCATATGCACCTAGGATGA 60.338 52.381 26.52 0.00 42.21 2.92
182 183 1.081892 GCGCATATGCACCTAGGATG 58.918 55.000 26.52 9.45 42.21 3.51
187 188 1.071299 CTGGGCGCATATGCACCTA 59.929 57.895 28.92 23.88 42.60 3.08
188 189 2.203252 CTGGGCGCATATGCACCT 60.203 61.111 28.92 0.00 42.60 4.00
189 190 3.289834 CCTGGGCGCATATGCACC 61.290 66.667 23.91 23.91 42.28 5.01
190 191 2.203195 TCCTGGGCGCATATGCAC 60.203 61.111 26.52 17.52 42.21 4.57
191 192 2.111669 CTCCTGGGCGCATATGCA 59.888 61.111 26.52 6.89 42.21 3.96
193 194 1.964891 CTGCTCCTGGGCGCATATG 60.965 63.158 10.83 0.00 35.21 1.78
195 196 2.763710 TCTGCTCCTGGGCGCATA 60.764 61.111 10.83 0.00 35.21 3.14
200 201 3.805891 GATCGCTCTGCTCCTGGGC 62.806 68.421 0.00 0.00 0.00 5.36
201 202 2.420890 GATCGCTCTGCTCCTGGG 59.579 66.667 0.00 0.00 0.00 4.45
202 203 1.227205 GTGATCGCTCTGCTCCTGG 60.227 63.158 0.00 0.00 0.00 4.45
203 204 0.175302 AAGTGATCGCTCTGCTCCTG 59.825 55.000 9.70 0.00 0.00 3.86
204 205 0.459489 GAAGTGATCGCTCTGCTCCT 59.541 55.000 9.70 0.00 0.00 3.69
205 206 0.529555 GGAAGTGATCGCTCTGCTCC 60.530 60.000 9.70 9.05 0.00 4.70
206 207 0.869454 CGGAAGTGATCGCTCTGCTC 60.869 60.000 9.70 3.14 0.00 4.26
215 216 2.930682 GTCAGTTTAGGCGGAAGTGATC 59.069 50.000 13.78 0.00 38.36 2.92
218 219 2.163818 TGTCAGTTTAGGCGGAAGTG 57.836 50.000 4.87 4.87 0.00 3.16
219 220 3.418684 AATGTCAGTTTAGGCGGAAGT 57.581 42.857 0.00 0.00 0.00 3.01
221 222 4.015872 AGAAATGTCAGTTTAGGCGGAA 57.984 40.909 0.00 0.00 0.00 4.30
222 223 3.695830 AGAAATGTCAGTTTAGGCGGA 57.304 42.857 0.00 0.00 0.00 5.54
225 226 6.681777 ACATGAAAGAAATGTCAGTTTAGGC 58.318 36.000 0.00 0.00 32.83 3.93
229 230 9.125026 ACTTCTACATGAAAGAAATGTCAGTTT 57.875 29.630 0.00 0.00 39.05 2.66
230 231 8.682936 ACTTCTACATGAAAGAAATGTCAGTT 57.317 30.769 0.00 0.00 39.05 3.16
293 294 8.744568 ACAACAAAAATCAAAATGGGTAACAT 57.255 26.923 0.00 0.00 43.07 2.71
295 296 7.848539 CGAACAACAAAAATCAAAATGGGTAAC 59.151 33.333 0.00 0.00 0.00 2.50
296 297 7.764443 TCGAACAACAAAAATCAAAATGGGTAA 59.236 29.630 0.00 0.00 0.00 2.85
297 298 7.265673 TCGAACAACAAAAATCAAAATGGGTA 58.734 30.769 0.00 0.00 0.00 3.69
298 299 6.109359 TCGAACAACAAAAATCAAAATGGGT 58.891 32.000 0.00 0.00 0.00 4.51
300 301 7.462109 TCTCGAACAACAAAAATCAAAATGG 57.538 32.000 0.00 0.00 0.00 3.16
301 302 9.919348 AAATCTCGAACAACAAAAATCAAAATG 57.081 25.926 0.00 0.00 0.00 2.32
302 303 9.919348 CAAATCTCGAACAACAAAAATCAAAAT 57.081 25.926 0.00 0.00 0.00 1.82
303 304 7.902403 GCAAATCTCGAACAACAAAAATCAAAA 59.098 29.630 0.00 0.00 0.00 2.44
304 305 7.277539 AGCAAATCTCGAACAACAAAAATCAAA 59.722 29.630 0.00 0.00 0.00 2.69
305 306 6.756074 AGCAAATCTCGAACAACAAAAATCAA 59.244 30.769 0.00 0.00 0.00 2.57
306 307 6.272318 AGCAAATCTCGAACAACAAAAATCA 58.728 32.000 0.00 0.00 0.00 2.57
308 309 7.277539 TCAAAGCAAATCTCGAACAACAAAAAT 59.722 29.630 0.00 0.00 0.00 1.82
309 310 6.587990 TCAAAGCAAATCTCGAACAACAAAAA 59.412 30.769 0.00 0.00 0.00 1.94
311 312 5.645624 TCAAAGCAAATCTCGAACAACAAA 58.354 33.333 0.00 0.00 0.00 2.83
312 313 5.242069 TCAAAGCAAATCTCGAACAACAA 57.758 34.783 0.00 0.00 0.00 2.83
313 314 4.891627 TCAAAGCAAATCTCGAACAACA 57.108 36.364 0.00 0.00 0.00 3.33
314 315 5.117592 CCATTCAAAGCAAATCTCGAACAAC 59.882 40.000 0.00 0.00 0.00 3.32
315 316 5.009510 TCCATTCAAAGCAAATCTCGAACAA 59.990 36.000 0.00 0.00 0.00 2.83
318 319 4.156556 CCTCCATTCAAAGCAAATCTCGAA 59.843 41.667 0.00 0.00 0.00 3.71
319 320 3.691118 CCTCCATTCAAAGCAAATCTCGA 59.309 43.478 0.00 0.00 0.00 4.04
321 322 5.047802 TGTTCCTCCATTCAAAGCAAATCTC 60.048 40.000 0.00 0.00 0.00 2.75
323 324 5.138125 TGTTCCTCCATTCAAAGCAAATC 57.862 39.130 0.00 0.00 0.00 2.17
325 326 5.549742 AATGTTCCTCCATTCAAAGCAAA 57.450 34.783 0.00 0.00 29.02 3.68
327 328 5.305128 AGAAAATGTTCCTCCATTCAAAGCA 59.695 36.000 0.00 0.00 34.01 3.91
328 329 5.787380 AGAAAATGTTCCTCCATTCAAAGC 58.213 37.500 0.00 0.00 34.01 3.51
392 393 8.237267 GCATACTGCTACTGAAATAAAACAAGT 58.763 33.333 0.00 0.00 40.96 3.16
393 394 8.606727 GCATACTGCTACTGAAATAAAACAAG 57.393 34.615 0.00 0.00 40.96 3.16
441 442 6.815089 TGCCATTCAACTGACAAGTAAAATT 58.185 32.000 0.00 0.00 34.77 1.82
451 2752 6.532657 CCATCTTAATTTGCCATTCAACTGAC 59.467 38.462 0.00 0.00 33.73 3.51
551 2874 1.275291 ACCATCTCGTCGTGGTGAAAT 59.725 47.619 9.07 0.00 46.55 2.17
653 2987 2.231745 CTGCATGGTTCGCTCACGTG 62.232 60.000 9.94 9.94 41.18 4.49
654 2988 2.029288 CTGCATGGTTCGCTCACGT 61.029 57.895 0.00 0.00 41.18 4.49
655 2989 2.743752 CCTGCATGGTTCGCTCACG 61.744 63.158 0.00 0.00 42.01 4.35
656 2990 1.375908 TCCTGCATGGTTCGCTCAC 60.376 57.895 0.00 0.00 37.07 3.51
657 2991 1.375908 GTCCTGCATGGTTCGCTCA 60.376 57.895 0.00 0.00 37.07 4.26
658 2992 1.078848 AGTCCTGCATGGTTCGCTC 60.079 57.895 0.00 0.00 37.07 5.03
659 2993 1.078848 GAGTCCTGCATGGTTCGCT 60.079 57.895 0.00 0.00 37.07 4.93
674 3008 2.700371 TGGATCAAGTGTGTGAGTGAGT 59.300 45.455 0.00 0.00 0.00 3.41
696 3030 0.033504 TTTCCGTGGAGACAGCTCAC 59.966 55.000 0.00 0.00 44.46 3.51
698 3032 1.646189 GATTTCCGTGGAGACAGCTC 58.354 55.000 0.00 0.00 44.46 4.09
710 3044 1.535462 GTGGTTGTGACTGGATTTCCG 59.465 52.381 0.00 0.00 39.43 4.30
751 6425 6.150307 TCGAGAGCCAAGAGATATGAGTATTC 59.850 42.308 0.00 0.00 0.00 1.75
766 6440 1.899814 ACCTGTAACATCGAGAGCCAA 59.100 47.619 0.00 0.00 0.00 4.52
780 6454 2.698274 TCTTGCACTCAGAACACCTGTA 59.302 45.455 0.00 0.00 43.38 2.74
781 6455 1.486310 TCTTGCACTCAGAACACCTGT 59.514 47.619 0.00 0.00 43.38 4.00
784 6458 2.533266 TCTCTTGCACTCAGAACACC 57.467 50.000 0.00 0.00 0.00 4.16
795 6471 2.558378 GTGCTGCATAGATCTCTTGCA 58.442 47.619 24.10 24.10 43.63 4.08
866 6542 6.479972 AGGGATCGATTTAGTGTGTAATCA 57.520 37.500 0.00 0.00 31.70 2.57
892 6571 0.834687 TTAAGGCAGTCGGAGGTGGT 60.835 55.000 0.00 0.00 0.00 4.16
945 6628 0.036732 TGCAAGAGATGGGTGTGTCC 59.963 55.000 0.00 0.00 0.00 4.02
946 6629 1.002430 TCTGCAAGAGATGGGTGTGTC 59.998 52.381 0.00 0.00 38.67 3.67
963 6648 2.198827 TGTTGGCAGTATGGGTTCTG 57.801 50.000 0.00 0.00 35.86 3.02
975 6660 0.038709 GGCTACGCAAAATGTTGGCA 60.039 50.000 0.00 0.00 37.52 4.92
979 6669 4.839668 TTGTAAGGCTACGCAAAATGTT 57.160 36.364 0.00 0.00 0.00 2.71
997 6687 0.539438 ATGGTTGTGGTCGCCATTGT 60.539 50.000 1.90 0.00 39.76 2.71
1011 6701 2.745968 GAGGAGGAGAGAGACATGGTT 58.254 52.381 0.00 0.00 0.00 3.67
1020 6710 1.840737 CAAAGGTCGAGGAGGAGAGA 58.159 55.000 0.00 0.00 0.00 3.10
1064 6754 1.732732 CGCCAAAGAGAGTCGACGATT 60.733 52.381 10.46 0.00 0.00 3.34
1127 6818 1.224870 GGGCTGCTAGAGGAAACCC 59.775 63.158 0.00 0.00 0.00 4.11
1138 6829 3.009115 ACCGTACCATGGGCTGCT 61.009 61.111 18.09 0.00 0.00 4.24
1191 9580 2.517402 AGGTAGCTCGGAGGCTCG 60.517 66.667 8.69 4.22 42.97 5.03
1218 9607 0.694444 ACCCATAGTCGCCAGGGAAT 60.694 55.000 2.90 0.00 44.30 3.01
1269 9658 1.599797 CCGGTTCTTGGCGAAGGTT 60.600 57.895 8.73 0.00 30.85 3.50
1368 9757 3.744559 GCCTCGCCAAACTTGACA 58.255 55.556 0.00 0.00 0.00 3.58
1401 9790 1.280710 TCGCTAAAAATCTGGGAGCCA 59.719 47.619 0.00 0.00 0.00 4.75
1461 13533 0.465705 TAGCTAGGATGCTTTGCGCT 59.534 50.000 9.73 0.00 43.74 5.92
1488 13560 1.732259 CCCATTAGCACGACTTGACAC 59.268 52.381 0.00 0.00 0.00 3.67
1503 13575 4.096003 CCCTCGACGGCACCCATT 62.096 66.667 0.00 0.00 0.00 3.16
1557 13629 2.368011 GCCTGGGTAGAGTGGGTCC 61.368 68.421 0.00 0.00 0.00 4.46
1605 13677 2.268920 GCGAATGCCTCAGGGTCA 59.731 61.111 0.00 0.00 33.98 4.02
1623 13695 2.015456 TCTCCTTCACCTTGAGCTCA 57.985 50.000 13.74 13.74 0.00 4.26
1662 13734 8.474025 ACAAAGAAACCAAACATTGAGAACATA 58.526 29.630 0.00 0.00 0.00 2.29
1680 13752 4.451096 GTGACGATAGCTTGGACAAAGAAA 59.549 41.667 0.00 0.00 37.65 2.52
1782 13854 2.657143 ACTTACTTGCCGGGAACAAAA 58.343 42.857 3.37 0.00 0.00 2.44
1802 13874 2.813754 GTGTGCACAGGCTTCAAGATAA 59.186 45.455 22.40 0.00 41.91 1.75
1804 13876 1.242076 GTGTGCACAGGCTTCAAGAT 58.758 50.000 22.40 0.00 41.91 2.40
1813 13891 2.848858 GCTTGGTGGTGTGCACAGG 61.849 63.158 22.40 5.81 0.00 4.00
1827 13905 3.188460 AGGCTGTACAATAAACACGCTTG 59.812 43.478 0.00 0.00 0.00 4.01
1837 13915 5.995565 AGTACAACTCAGGCTGTACAATA 57.004 39.130 15.27 0.64 46.79 1.90
1838 13916 4.891992 AGTACAACTCAGGCTGTACAAT 57.108 40.909 15.27 1.62 46.79 2.71
1840 13918 3.508793 GGTAGTACAACTCAGGCTGTACA 59.491 47.826 15.27 0.00 46.79 2.90
1841 13919 3.508793 TGGTAGTACAACTCAGGCTGTAC 59.491 47.826 15.27 9.95 45.42 2.90
1842 13920 3.770046 TGGTAGTACAACTCAGGCTGTA 58.230 45.455 15.27 0.00 0.00 2.74
1843 13921 2.605257 TGGTAGTACAACTCAGGCTGT 58.395 47.619 15.27 0.00 0.00 4.40
1844 13922 3.195610 TCATGGTAGTACAACTCAGGCTG 59.804 47.826 8.58 8.58 0.00 4.85
1845 13923 3.441101 TCATGGTAGTACAACTCAGGCT 58.559 45.455 2.06 0.00 0.00 4.58
1935 14015 4.886489 TGTCACAACAAAATGGTCAGATCA 59.114 37.500 0.00 0.00 30.70 2.92
1957 14037 4.605968 TGTTTCCGTGATTGTGATTGTTG 58.394 39.130 0.00 0.00 0.00 3.33
1958 14038 4.909696 TGTTTCCGTGATTGTGATTGTT 57.090 36.364 0.00 0.00 0.00 2.83
2021 14110 7.482654 TTGAGTGACAAGTAATTTCAGACTG 57.517 36.000 0.00 0.00 34.20 3.51
2022 14111 8.562892 CATTTGAGTGACAAGTAATTTCAGACT 58.437 33.333 0.00 0.00 39.77 3.24
2025 14114 7.874940 TCCATTTGAGTGACAAGTAATTTCAG 58.125 34.615 0.00 0.00 39.77 3.02
2026 14115 7.815840 TCCATTTGAGTGACAAGTAATTTCA 57.184 32.000 0.00 0.00 39.77 2.69
2082 14171 4.558178 TGTCGCTCAAACGAAGGTATTTA 58.442 39.130 0.00 0.00 44.93 1.40
2114 14204 7.891561 AGCACAGTATGATACTTTCTCTATCC 58.108 38.462 1.60 0.00 39.69 2.59
2122 14212 5.187772 TCACCTGAGCACAGTATGATACTTT 59.812 40.000 10.37 0.00 42.05 2.66
2133 15162 0.390492 TGTCACTCACCTGAGCACAG 59.610 55.000 3.89 3.89 45.79 3.66
2143 15172 8.110612 CACACGATTCTATAAATTGTCACTCAC 58.889 37.037 0.00 0.00 0.00 3.51
2154 15183 6.151004 TCAACGACACACACGATTCTATAAA 58.849 36.000 0.00 0.00 34.70 1.40
2265 15294 0.037160 GGAGAGTACCCCCGCAAAAA 59.963 55.000 0.00 0.00 0.00 1.94
2266 15295 1.128809 TGGAGAGTACCCCCGCAAAA 61.129 55.000 0.00 0.00 0.00 2.44
2267 15296 1.536907 TGGAGAGTACCCCCGCAAA 60.537 57.895 0.00 0.00 0.00 3.68
2268 15297 2.120940 TGGAGAGTACCCCCGCAA 59.879 61.111 0.00 0.00 0.00 4.85
2269 15298 2.682494 GTGGAGAGTACCCCCGCA 60.682 66.667 4.93 0.00 0.00 5.69
2270 15299 3.834799 CGTGGAGAGTACCCCCGC 61.835 72.222 0.00 0.00 0.00 6.13
2271 15300 3.834799 GCGTGGAGAGTACCCCCG 61.835 72.222 0.00 0.00 0.00 5.73
2272 15301 3.468140 GGCGTGGAGAGTACCCCC 61.468 72.222 0.00 0.00 0.00 5.40
2273 15302 1.551019 AAAGGCGTGGAGAGTACCCC 61.551 60.000 0.00 0.00 0.00 4.95
2274 15303 0.391263 CAAAGGCGTGGAGAGTACCC 60.391 60.000 0.00 0.00 0.00 3.69
2275 15304 0.606604 TCAAAGGCGTGGAGAGTACC 59.393 55.000 0.00 0.00 0.00 3.34
2276 15305 2.094182 TGATCAAAGGCGTGGAGAGTAC 60.094 50.000 0.00 0.00 0.00 2.73
2277 15306 2.176045 TGATCAAAGGCGTGGAGAGTA 58.824 47.619 0.00 0.00 0.00 2.59
2278 15307 0.976641 TGATCAAAGGCGTGGAGAGT 59.023 50.000 0.00 0.00 0.00 3.24
2279 15308 2.005451 CTTGATCAAAGGCGTGGAGAG 58.995 52.381 9.88 0.00 31.68 3.20
2280 15309 2.099141 CTTGATCAAAGGCGTGGAGA 57.901 50.000 9.88 0.00 31.68 3.71
2309 15338 7.752686 TGAGCGAGATAAATAGAGATCATTTCG 59.247 37.037 0.00 0.00 0.00 3.46
2325 15354 1.134699 CCCTTGCAACTGAGCGAGATA 60.135 52.381 13.17 0.00 46.81 1.98
2358 15387 9.588774 CTGTTTTGTTGCAAATTATGAAATGAG 57.411 29.630 0.00 0.00 0.00 2.90
2385 15414 2.634600 TGCGGTATAATTGGACACACC 58.365 47.619 0.00 0.00 39.54 4.16
2470 15500 4.141528 ACCTTCTCTGGAATAGATGCTTGG 60.142 45.833 0.00 0.00 34.21 3.61
2473 15503 5.707066 AAACCTTCTCTGGAATAGATGCT 57.293 39.130 0.00 0.00 34.21 3.79
2474 15504 6.558909 CAAAAACCTTCTCTGGAATAGATGC 58.441 40.000 0.00 0.00 34.21 3.91
2475 15505 6.405176 GGCAAAAACCTTCTCTGGAATAGATG 60.405 42.308 0.00 0.00 34.21 2.90
2481 15511 2.091333 AGGGCAAAAACCTTCTCTGGAA 60.091 45.455 0.00 0.00 33.64 3.53
2483 15513 1.615392 CAGGGCAAAAACCTTCTCTGG 59.385 52.381 0.00 0.00 35.78 3.86
2484 15514 2.555757 CTCAGGGCAAAAACCTTCTCTG 59.444 50.000 0.00 0.00 35.78 3.35
2485 15515 2.443255 TCTCAGGGCAAAAACCTTCTCT 59.557 45.455 0.00 0.00 35.78 3.10
2486 15516 2.863809 TCTCAGGGCAAAAACCTTCTC 58.136 47.619 0.00 0.00 35.78 2.87
2488 15518 3.573967 TGAATCTCAGGGCAAAAACCTTC 59.426 43.478 0.00 0.00 35.78 3.46
2489 15519 3.575687 CTGAATCTCAGGGCAAAAACCTT 59.424 43.478 0.00 0.00 40.71 3.50
2491 15521 2.353109 GCTGAATCTCAGGGCAAAAACC 60.353 50.000 5.84 0.00 44.43 3.27
2492 15522 2.353109 GGCTGAATCTCAGGGCAAAAAC 60.353 50.000 5.84 0.00 44.43 2.43
2493 15523 1.895131 GGCTGAATCTCAGGGCAAAAA 59.105 47.619 5.84 0.00 44.43 1.94
2494 15524 1.203038 TGGCTGAATCTCAGGGCAAAA 60.203 47.619 5.84 0.00 44.43 2.44
2495 15525 0.405198 TGGCTGAATCTCAGGGCAAA 59.595 50.000 5.84 0.00 44.43 3.68
2496 15526 0.322816 GTGGCTGAATCTCAGGGCAA 60.323 55.000 5.84 0.00 44.43 4.52
2497 15527 1.203441 AGTGGCTGAATCTCAGGGCA 61.203 55.000 5.84 2.85 44.43 5.36
2498 15528 0.034670 AAGTGGCTGAATCTCAGGGC 60.035 55.000 5.84 0.51 44.43 5.19
2499 15529 1.681166 CCAAGTGGCTGAATCTCAGGG 60.681 57.143 5.84 0.00 44.43 4.45
2500 15530 1.004044 ACCAAGTGGCTGAATCTCAGG 59.996 52.381 5.84 0.00 44.43 3.86
2501 15531 2.486472 ACCAAGTGGCTGAATCTCAG 57.514 50.000 0.00 0.00 46.90 3.35
2502 15532 2.106338 TCAACCAAGTGGCTGAATCTCA 59.894 45.455 0.85 0.00 37.36 3.27
2503 15533 2.783135 TCAACCAAGTGGCTGAATCTC 58.217 47.619 0.85 0.00 37.36 2.75
2505 15535 3.858503 GCTTTCAACCAAGTGGCTGAATC 60.859 47.826 15.13 8.19 46.14 2.52
2506 15536 2.036346 GCTTTCAACCAAGTGGCTGAAT 59.964 45.455 15.13 0.00 46.14 2.57
2508 15538 1.032014 GCTTTCAACCAAGTGGCTGA 58.968 50.000 0.00 0.00 38.43 4.26
2520 15550 1.189752 TGCCCACAAGTTGCTTTCAA 58.810 45.000 1.81 0.00 0.00 2.69
2521 15551 1.412079 ATGCCCACAAGTTGCTTTCA 58.588 45.000 1.81 0.00 0.00 2.69
2523 15553 2.485302 GGAAATGCCCACAAGTTGCTTT 60.485 45.455 1.81 0.00 0.00 3.51
2525 15555 0.681175 GGAAATGCCCACAAGTTGCT 59.319 50.000 1.81 0.00 0.00 3.91
2527 15557 3.070015 AGAAAGGAAATGCCCACAAGTTG 59.930 43.478 0.00 0.00 37.37 3.16
2528 15558 3.308401 AGAAAGGAAATGCCCACAAGTT 58.692 40.909 0.00 0.00 37.37 2.66
2529 15559 2.962859 AGAAAGGAAATGCCCACAAGT 58.037 42.857 0.00 0.00 37.37 3.16
2530 15560 3.321682 TCAAGAAAGGAAATGCCCACAAG 59.678 43.478 0.00 0.00 37.37 3.16
2532 15562 2.627699 GTCAAGAAAGGAAATGCCCACA 59.372 45.455 0.00 0.00 37.37 4.17
2533 15563 2.627699 TGTCAAGAAAGGAAATGCCCAC 59.372 45.455 0.00 0.00 37.37 4.61
2534 15564 2.627699 GTGTCAAGAAAGGAAATGCCCA 59.372 45.455 0.00 0.00 37.37 5.36
2536 15566 4.240096 CATGTGTCAAGAAAGGAAATGCC 58.760 43.478 0.00 0.00 0.00 4.40
2537 15567 4.874970 ACATGTGTCAAGAAAGGAAATGC 58.125 39.130 0.00 0.00 0.00 3.56
2538 15568 9.559958 GTAATACATGTGTCAAGAAAGGAAATG 57.440 33.333 9.11 0.00 0.00 2.32
2539 15569 9.520515 AGTAATACATGTGTCAAGAAAGGAAAT 57.479 29.630 9.11 0.00 0.00 2.17
2540 15570 8.918202 AGTAATACATGTGTCAAGAAAGGAAA 57.082 30.769 9.11 0.00 0.00 3.13
2541 15571 8.918202 AAGTAATACATGTGTCAAGAAAGGAA 57.082 30.769 9.11 0.00 0.00 3.36
2542 15572 8.783093 CAAAGTAATACATGTGTCAAGAAAGGA 58.217 33.333 9.11 0.00 0.00 3.36
2543 15573 8.023128 CCAAAGTAATACATGTGTCAAGAAAGG 58.977 37.037 9.11 0.00 0.00 3.11
2544 15574 8.023128 CCCAAAGTAATACATGTGTCAAGAAAG 58.977 37.037 9.11 0.00 0.00 2.62
2545 15575 7.721842 TCCCAAAGTAATACATGTGTCAAGAAA 59.278 33.333 9.11 0.00 0.00 2.52
2546 15576 7.227873 TCCCAAAGTAATACATGTGTCAAGAA 58.772 34.615 9.11 0.00 0.00 2.52
2547 15577 6.774673 TCCCAAAGTAATACATGTGTCAAGA 58.225 36.000 9.11 0.00 0.00 3.02
2548 15578 7.630242 ATCCCAAAGTAATACATGTGTCAAG 57.370 36.000 9.11 0.00 0.00 3.02
2549 15579 9.119418 CATATCCCAAAGTAATACATGTGTCAA 57.881 33.333 9.11 0.00 0.00 3.18
2550 15580 7.719193 CCATATCCCAAAGTAATACATGTGTCA 59.281 37.037 9.11 0.00 0.00 3.58
2551 15581 7.719633 ACCATATCCCAAAGTAATACATGTGTC 59.280 37.037 9.11 0.00 0.00 3.67
2553 15583 7.040478 CCACCATATCCCAAAGTAATACATGTG 60.040 40.741 9.11 0.00 0.00 3.21
2554 15584 7.004086 CCACCATATCCCAAAGTAATACATGT 58.996 38.462 2.69 2.69 0.00 3.21
2560 15590 3.797269 ACCCCACCATATCCCAAAGTAAT 59.203 43.478 0.00 0.00 0.00 1.89
2561 15591 3.203059 ACCCCACCATATCCCAAAGTAA 58.797 45.455 0.00 0.00 0.00 2.24
2562 15592 2.866515 ACCCCACCATATCCCAAAGTA 58.133 47.619 0.00 0.00 0.00 2.24
2563 15593 1.693799 ACCCCACCATATCCCAAAGT 58.306 50.000 0.00 0.00 0.00 2.66
2564 15594 3.053077 TCTACCCCACCATATCCCAAAG 58.947 50.000 0.00 0.00 0.00 2.77
2565 15595 3.153043 TCTACCCCACCATATCCCAAA 57.847 47.619 0.00 0.00 0.00 3.28
2566 15596 2.899906 TCTACCCCACCATATCCCAA 57.100 50.000 0.00 0.00 0.00 4.12
2567 15597 2.781174 GTTTCTACCCCACCATATCCCA 59.219 50.000 0.00 0.00 0.00 4.37
2568 15598 2.107726 GGTTTCTACCCCACCATATCCC 59.892 54.545 0.00 0.00 38.60 3.85
2569 15599 2.224450 CGGTTTCTACCCCACCATATCC 60.224 54.545 0.00 0.00 41.75 2.59
2571 15601 2.766736 TCGGTTTCTACCCCACCATAT 58.233 47.619 0.00 0.00 41.75 1.78
2572 15602 2.250921 TCGGTTTCTACCCCACCATA 57.749 50.000 0.00 0.00 41.75 2.74
2573 15603 1.211949 CATCGGTTTCTACCCCACCAT 59.788 52.381 0.00 0.00 41.75 3.55
2574 15604 0.616371 CATCGGTTTCTACCCCACCA 59.384 55.000 0.00 0.00 41.75 4.17
2575 15605 0.616891 ACATCGGTTTCTACCCCACC 59.383 55.000 0.00 0.00 41.75 4.61
2576 15606 1.002773 ACACATCGGTTTCTACCCCAC 59.997 52.381 0.00 0.00 41.75 4.61
2577 15607 1.002659 CACACATCGGTTTCTACCCCA 59.997 52.381 0.00 0.00 41.75 4.96
2578 15608 1.677820 CCACACATCGGTTTCTACCCC 60.678 57.143 0.00 0.00 41.75 4.95
2580 15610 1.084289 GCCACACATCGGTTTCTACC 58.916 55.000 0.00 0.00 41.33 3.18
2581 15611 1.732259 CAGCCACACATCGGTTTCTAC 59.268 52.381 0.00 0.00 0.00 2.59
2582 15612 1.346395 ACAGCCACACATCGGTTTCTA 59.654 47.619 0.00 0.00 0.00 2.10
2584 15614 0.238289 CACAGCCACACATCGGTTTC 59.762 55.000 0.00 0.00 0.00 2.78
2585 15615 0.465460 ACACAGCCACACATCGGTTT 60.465 50.000 0.00 0.00 0.00 3.27
2586 15616 1.148273 ACACAGCCACACATCGGTT 59.852 52.632 0.00 0.00 0.00 4.44
2588 15618 1.165907 AACACACAGCCACACATCGG 61.166 55.000 0.00 0.00 0.00 4.18
2589 15619 0.662619 AAACACACAGCCACACATCG 59.337 50.000 0.00 0.00 0.00 3.84
2590 15620 2.859538 CAAAAACACACAGCCACACATC 59.140 45.455 0.00 0.00 0.00 3.06
2591 15621 2.495270 TCAAAAACACACAGCCACACAT 59.505 40.909 0.00 0.00 0.00 3.21
2592 15622 1.889170 TCAAAAACACACAGCCACACA 59.111 42.857 0.00 0.00 0.00 3.72
2593 15623 2.645730 TCAAAAACACACAGCCACAC 57.354 45.000 0.00 0.00 0.00 3.82
2594 15624 3.194329 TGAATCAAAAACACACAGCCACA 59.806 39.130 0.00 0.00 0.00 4.17
2595 15625 3.779759 TGAATCAAAAACACACAGCCAC 58.220 40.909 0.00 0.00 0.00 5.01
2596 15626 4.462508 TTGAATCAAAAACACACAGCCA 57.537 36.364 0.00 0.00 0.00 4.75
2597 15627 5.989551 ATTTGAATCAAAAACACACAGCC 57.010 34.783 12.75 0.00 36.90 4.85
2598 15628 8.672214 AAAAATTTGAATCAAAAACACACAGC 57.328 26.923 12.75 0.00 36.90 4.40
2620 15650 5.175491 GCGATGAAGCAATGAAGTTCAAAAA 59.825 36.000 10.14 0.00 34.02 1.94
2621 15651 4.681025 GCGATGAAGCAATGAAGTTCAAAA 59.319 37.500 10.14 0.00 34.02 2.44
2625 15655 3.120060 ACAGCGATGAAGCAATGAAGTTC 60.120 43.478 8.12 0.00 40.15 3.01
2626 15656 2.816087 ACAGCGATGAAGCAATGAAGTT 59.184 40.909 8.12 0.00 40.15 2.66
2627 15657 2.161012 CACAGCGATGAAGCAATGAAGT 59.839 45.455 8.12 0.00 40.15 3.01
2628 15658 2.161012 ACACAGCGATGAAGCAATGAAG 59.839 45.455 8.12 0.00 40.15 3.02
2629 15659 2.153645 ACACAGCGATGAAGCAATGAA 58.846 42.857 8.12 0.00 40.15 2.57
2631 15661 2.674852 ACTACACAGCGATGAAGCAATG 59.325 45.455 8.12 0.00 40.15 2.82
2632 15662 2.977914 ACTACACAGCGATGAAGCAAT 58.022 42.857 8.12 0.00 40.15 3.56
2634 15664 2.455674 AACTACACAGCGATGAAGCA 57.544 45.000 8.12 0.00 40.15 3.91
2635 15665 4.260375 CCAATAACTACACAGCGATGAAGC 60.260 45.833 8.12 0.00 37.41 3.86
2637 15667 4.188462 CCCAATAACTACACAGCGATGAA 58.812 43.478 8.12 0.00 0.00 2.57
2638 15668 3.431626 CCCCAATAACTACACAGCGATGA 60.432 47.826 8.12 0.00 0.00 2.92
2640 15670 2.504175 ACCCCAATAACTACACAGCGAT 59.496 45.455 0.00 0.00 0.00 4.58
2641 15671 1.903860 ACCCCAATAACTACACAGCGA 59.096 47.619 0.00 0.00 0.00 4.93
2642 15672 2.006888 CACCCCAATAACTACACAGCG 58.993 52.381 0.00 0.00 0.00 5.18
2643 15673 2.365582 CCACCCCAATAACTACACAGC 58.634 52.381 0.00 0.00 0.00 4.40
2645 15675 2.306512 GACCCACCCCAATAACTACACA 59.693 50.000 0.00 0.00 0.00 3.72
2647 15677 2.923908 AGACCCACCCCAATAACTACA 58.076 47.619 0.00 0.00 0.00 2.74
2649 15679 3.043418 GCTAGACCCACCCCAATAACTA 58.957 50.000 0.00 0.00 0.00 2.24
2650 15680 1.844497 GCTAGACCCACCCCAATAACT 59.156 52.381 0.00 0.00 0.00 2.24
2651 15681 1.562475 TGCTAGACCCACCCCAATAAC 59.438 52.381 0.00 0.00 0.00 1.89
2652 15682 1.974028 TGCTAGACCCACCCCAATAA 58.026 50.000 0.00 0.00 0.00 1.40
2653 15683 1.974028 TTGCTAGACCCACCCCAATA 58.026 50.000 0.00 0.00 0.00 1.90
2654 15684 1.308877 ATTGCTAGACCCACCCCAAT 58.691 50.000 0.00 0.00 0.00 3.16
2655 15685 1.080638 AATTGCTAGACCCACCCCAA 58.919 50.000 0.00 0.00 0.00 4.12
2657 15687 2.100197 GAAAATTGCTAGACCCACCCC 58.900 52.381 0.00 0.00 0.00 4.95
2658 15688 2.755103 CAGAAAATTGCTAGACCCACCC 59.245 50.000 0.00 0.00 0.00 4.61
2660 15690 3.366374 GCACAGAAAATTGCTAGACCCAC 60.366 47.826 0.00 0.00 35.74 4.61
2662 15692 2.159517 CGCACAGAAAATTGCTAGACCC 60.160 50.000 0.00 0.00 36.54 4.46
2664 15694 4.142816 ACATCGCACAGAAAATTGCTAGAC 60.143 41.667 0.00 0.00 36.54 2.59
2666 15696 4.093514 CACATCGCACAGAAAATTGCTAG 58.906 43.478 0.00 0.00 36.54 3.42
2667 15697 3.119884 CCACATCGCACAGAAAATTGCTA 60.120 43.478 0.00 0.00 36.54 3.49
2668 15698 2.352030 CCACATCGCACAGAAAATTGCT 60.352 45.455 0.00 0.00 36.54 3.91
2669 15699 1.987770 CCACATCGCACAGAAAATTGC 59.012 47.619 0.00 0.00 35.26 3.56
2671 15701 2.228822 GTCCCACATCGCACAGAAAATT 59.771 45.455 0.00 0.00 0.00 1.82
2673 15703 1.234821 GTCCCACATCGCACAGAAAA 58.765 50.000 0.00 0.00 0.00 2.29
2674 15704 0.107643 TGTCCCACATCGCACAGAAA 59.892 50.000 0.00 0.00 0.00 2.52
2675 15705 0.324614 ATGTCCCACATCGCACAGAA 59.675 50.000 0.00 0.00 32.38 3.02
2677 15707 1.665679 GTAATGTCCCACATCGCACAG 59.334 52.381 0.00 0.00 37.97 3.66
2678 15708 1.277842 AGTAATGTCCCACATCGCACA 59.722 47.619 0.00 0.00 37.97 4.57
2679 15709 2.024176 AGTAATGTCCCACATCGCAC 57.976 50.000 0.00 0.00 37.97 5.34
2683 15713 3.763897 AGGCAAAAGTAATGTCCCACATC 59.236 43.478 0.00 0.00 37.97 3.06
2685 15715 3.237268 AGGCAAAAGTAATGTCCCACA 57.763 42.857 0.00 0.00 0.00 4.17
2690 16199 4.386652 CACATGCAAGGCAAAAGTAATGTC 59.613 41.667 0.00 0.00 43.62 3.06
2693 16202 4.309099 CACACATGCAAGGCAAAAGTAAT 58.691 39.130 0.00 0.00 43.62 1.89
2694 16203 3.715495 CACACATGCAAGGCAAAAGTAA 58.285 40.909 0.00 0.00 43.62 2.24
2695 16204 3.367992 CACACATGCAAGGCAAAAGTA 57.632 42.857 0.00 0.00 43.62 2.24
2713 16222 2.802667 CTACGACGCCATGCAGCAC 61.803 63.158 0.00 0.00 0.00 4.40
2715 16224 2.100631 AACTACGACGCCATGCAGC 61.101 57.895 0.00 0.00 0.00 5.25
2716 16225 0.735978 TCAACTACGACGCCATGCAG 60.736 55.000 0.00 0.00 0.00 4.41
2717 16226 0.108377 ATCAACTACGACGCCATGCA 60.108 50.000 0.00 0.00 0.00 3.96
2718 16227 1.006832 AATCAACTACGACGCCATGC 58.993 50.000 0.00 0.00 0.00 4.06
2719 16228 2.670905 TCAAATCAACTACGACGCCATG 59.329 45.455 0.00 0.00 0.00 3.66
2720 16229 2.967362 TCAAATCAACTACGACGCCAT 58.033 42.857 0.00 0.00 0.00 4.40
2723 16232 3.539592 CGTGATCAAATCAACTACGACGC 60.540 47.826 0.00 0.00 41.69 5.19
2724 16233 3.606777 ACGTGATCAAATCAACTACGACG 59.393 43.478 0.00 0.00 41.69 5.12
2725 16234 5.798934 ACTACGTGATCAAATCAACTACGAC 59.201 40.000 0.00 0.00 41.69 4.34
2726 16235 5.946298 ACTACGTGATCAAATCAACTACGA 58.054 37.500 0.00 0.00 41.69 3.43
2727 16236 6.627690 AACTACGTGATCAAATCAACTACG 57.372 37.500 0.00 0.00 41.69 3.51
2728 16237 9.136952 ACTAAACTACGTGATCAAATCAACTAC 57.863 33.333 0.00 0.00 41.69 2.73
2730 16239 8.603242 AACTAAACTACGTGATCAAATCAACT 57.397 30.769 0.00 0.00 41.69 3.16
2732 16241 9.658475 CAAAACTAAACTACGTGATCAAATCAA 57.342 29.630 0.00 0.00 41.69 2.57
2735 16244 8.287503 GGACAAAACTAAACTACGTGATCAAAT 58.712 33.333 0.00 0.00 0.00 2.32
2737 16246 6.074195 CGGACAAAACTAAACTACGTGATCAA 60.074 38.462 0.00 0.00 0.00 2.57
2738 16247 5.403166 CGGACAAAACTAAACTACGTGATCA 59.597 40.000 0.00 0.00 0.00 2.92
2739 16248 5.667156 GCGGACAAAACTAAACTACGTGATC 60.667 44.000 0.00 0.00 0.00 2.92
2740 16249 4.151157 GCGGACAAAACTAAACTACGTGAT 59.849 41.667 0.00 0.00 0.00 3.06
2742 16251 3.492011 AGCGGACAAAACTAAACTACGTG 59.508 43.478 0.00 0.00 0.00 4.49
2743 16252 3.721035 AGCGGACAAAACTAAACTACGT 58.279 40.909 0.00 0.00 0.00 3.57
2744 16253 4.720530 AAGCGGACAAAACTAAACTACG 57.279 40.909 0.00 0.00 0.00 3.51
2746 16255 5.237779 CCAGAAAGCGGACAAAACTAAACTA 59.762 40.000 0.00 0.00 0.00 2.24
2748 16257 4.201980 ACCAGAAAGCGGACAAAACTAAAC 60.202 41.667 0.00 0.00 0.00 2.01
2750 16259 3.547746 ACCAGAAAGCGGACAAAACTAA 58.452 40.909 0.00 0.00 0.00 2.24
2751 16260 3.202829 ACCAGAAAGCGGACAAAACTA 57.797 42.857 0.00 0.00 0.00 2.24
2753 16262 2.459934 CAACCAGAAAGCGGACAAAAC 58.540 47.619 0.00 0.00 0.00 2.43
2754 16263 1.407258 CCAACCAGAAAGCGGACAAAA 59.593 47.619 0.00 0.00 0.00 2.44
2755 16264 1.028905 CCAACCAGAAAGCGGACAAA 58.971 50.000 0.00 0.00 0.00 2.83
2757 16266 0.400213 ATCCAACCAGAAAGCGGACA 59.600 50.000 0.00 0.00 0.00 4.02
2758 16267 0.804989 CATCCAACCAGAAAGCGGAC 59.195 55.000 0.00 0.00 0.00 4.79
2759 16268 0.322456 CCATCCAACCAGAAAGCGGA 60.322 55.000 0.00 0.00 0.00 5.54
2760 16269 0.322456 TCCATCCAACCAGAAAGCGG 60.322 55.000 0.00 0.00 0.00 5.52
2762 16271 3.259123 ACAAATCCATCCAACCAGAAAGC 59.741 43.478 0.00 0.00 0.00 3.51
2763 16272 4.322198 CCACAAATCCATCCAACCAGAAAG 60.322 45.833 0.00 0.00 0.00 2.62
2765 16274 3.164268 CCACAAATCCATCCAACCAGAA 58.836 45.455 0.00 0.00 0.00 3.02
2766 16275 2.557229 CCCACAAATCCATCCAACCAGA 60.557 50.000 0.00 0.00 0.00 3.86
2767 16276 1.826720 CCCACAAATCCATCCAACCAG 59.173 52.381 0.00 0.00 0.00 4.00
2768 16277 1.935799 CCCACAAATCCATCCAACCA 58.064 50.000 0.00 0.00 0.00 3.67
2769 16278 0.536724 GCCCACAAATCCATCCAACC 59.463 55.000 0.00 0.00 0.00 3.77
2770 16279 1.205417 CAGCCCACAAATCCATCCAAC 59.795 52.381 0.00 0.00 0.00 3.77
2771 16280 1.559368 CAGCCCACAAATCCATCCAA 58.441 50.000 0.00 0.00 0.00 3.53
2772 16281 0.324552 CCAGCCCACAAATCCATCCA 60.325 55.000 0.00 0.00 0.00 3.41
2773 16282 1.679559 GCCAGCCCACAAATCCATCC 61.680 60.000 0.00 0.00 0.00 3.51
2774 16283 0.685458 AGCCAGCCCACAAATCCATC 60.685 55.000 0.00 0.00 0.00 3.51
2776 16285 1.607178 CAGCCAGCCCACAAATCCA 60.607 57.895 0.00 0.00 0.00 3.41
2777 16286 3.010413 GCAGCCAGCCCACAAATCC 62.010 63.158 0.00 0.00 37.23 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.