Multiple sequence alignment - TraesCS6A01G090700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G090700 chr6A 100.000 3596 0 0 1 3596 59319429 59323024 0.000000e+00 6641.0
1 TraesCS6A01G090700 chr6A 93.699 365 21 2 2822 3185 602293144 602293507 2.440000e-151 545.0
2 TraesCS6A01G090700 chr6A 73.413 583 131 21 1927 2494 205115662 205116235 2.830000e-46 196.0
3 TraesCS6A01G090700 chr6D 95.521 1719 65 8 977 2689 44496190 44497902 0.000000e+00 2737.0
4 TraesCS6A01G090700 chr6D 90.814 381 30 5 223 602 44495304 44495680 4.140000e-139 505.0
5 TraesCS6A01G090700 chr6D 89.488 371 23 6 599 960 44495760 44496123 4.230000e-124 455.0
6 TraesCS6A01G090700 chr6D 92.857 210 13 2 1 209 44495005 44495213 1.620000e-78 303.0
7 TraesCS6A01G090700 chr6D 94.792 96 3 1 3501 3596 44498228 44498321 8.040000e-32 148.0
8 TraesCS6A01G090700 chr6D 90.741 108 7 2 3377 3484 44497931 44498035 1.350000e-29 141.0
9 TraesCS6A01G090700 chr6D 87.209 86 11 0 237 322 44494526 44494611 8.220000e-17 99.0
10 TraesCS6A01G090700 chr6B 96.254 961 26 5 971 1928 113588109 113589062 0.000000e+00 1567.0
11 TraesCS6A01G090700 chr6B 94.753 648 33 1 1927 2574 113589135 113589781 0.000000e+00 1007.0
12 TraesCS6A01G090700 chr6B 89.956 229 11 5 736 960 113587829 113588049 5.880000e-73 285.0
13 TraesCS6A01G090700 chr6B 88.646 229 24 2 388 615 560789919 560790146 9.830000e-71 278.0
14 TraesCS6A01G090700 chr6B 86.585 164 20 2 225 387 113587078 113587240 2.850000e-41 180.0
15 TraesCS6A01G090700 chr6B 82.857 175 16 8 3432 3596 113591179 113591349 1.040000e-30 145.0
16 TraesCS6A01G090700 chr6B 93.103 58 3 1 2591 2647 113589819 113589876 2.300000e-12 84.2
17 TraesCS6A01G090700 chr6B 86.364 66 8 1 223 287 113586163 113586228 1.790000e-08 71.3
18 TraesCS6A01G090700 chr2B 81.391 1467 236 23 1106 2554 7856666 7855219 0.000000e+00 1162.0
19 TraesCS6A01G090700 chr2B 97.283 184 4 1 3179 3362 15682600 15682782 9.690000e-81 311.0
20 TraesCS6A01G090700 chr2B 88.841 233 23 3 385 615 799583664 799583433 2.110000e-72 283.0
21 TraesCS6A01G090700 chr2B 88.412 233 24 3 385 615 799581004 799580773 9.830000e-71 278.0
22 TraesCS6A01G090700 chr2D 81.155 1454 233 25 1097 2528 2930600 2932034 0.000000e+00 1129.0
23 TraesCS6A01G090700 chr2D 86.598 97 13 0 965 1061 571042353 571042257 1.370000e-19 108.0
24 TraesCS6A01G090700 chr5A 86.349 945 91 17 997 1928 613578376 613579295 0.000000e+00 996.0
25 TraesCS6A01G090700 chr5A 88.361 653 64 9 1923 2565 613579376 613580026 0.000000e+00 774.0
26 TraesCS6A01G090700 chr5A 95.763 354 13 2 2825 3177 375570726 375570374 1.450000e-158 569.0
27 TraesCS6A01G090700 chr5A 94.366 355 16 4 2825 3177 651996213 651995861 3.160000e-150 542.0
28 TraesCS6A01G090700 chr5A 77.549 824 150 25 1107 1923 52446972 52447767 7.030000e-127 464.0
29 TraesCS6A01G090700 chr3D 92.884 534 31 2 1138 1671 319866881 319867407 0.000000e+00 769.0
30 TraesCS6A01G090700 chr5D 85.449 701 84 12 1104 1795 491407565 491408256 0.000000e+00 713.0
31 TraesCS6A01G090700 chr5D 84.814 619 82 8 1945 2553 491417570 491418186 2.370000e-171 612.0
32 TraesCS6A01G090700 chr5B 83.228 632 98 6 1927 2553 605996378 605997006 1.120000e-159 573.0
33 TraesCS6A01G090700 chr5B 79.967 609 100 14 1107 1713 67493126 67492538 2.570000e-116 429.0
34 TraesCS6A01G090700 chr5B 95.337 193 7 2 3170 3362 434406479 434406289 4.510000e-79 305.0
35 TraesCS6A01G090700 chr5B 88.889 234 24 2 383 615 661842974 661842742 1.630000e-73 287.0
36 TraesCS6A01G090700 chr7B 94.678 357 17 2 2822 3177 130513925 130514280 1.460000e-153 553.0
37 TraesCS6A01G090700 chr7B 97.802 182 3 1 3181 3362 167628513 167628333 2.700000e-81 313.0
38 TraesCS6A01G090700 chr7B 89.520 229 22 2 388 615 40184409 40184636 4.540000e-74 289.0
39 TraesCS6A01G090700 chr3A 94.693 358 15 3 2822 3177 363381132 363381487 1.460000e-153 553.0
40 TraesCS6A01G090700 chr3A 94.678 357 17 2 2822 3177 558769143 558769498 1.460000e-153 553.0
41 TraesCS6A01G090700 chr2A 94.633 354 17 2 2825 3177 738738502 738738150 6.790000e-152 547.0
42 TraesCS6A01G090700 chr2A 93.699 365 21 2 2822 3185 278444786 278445149 2.440000e-151 545.0
43 TraesCS6A01G090700 chr2A 97.814 183 3 1 3183 3364 500032551 500032733 7.490000e-82 315.0
44 TraesCS6A01G090700 chr4A 93.699 365 21 2 2822 3185 103723256 103723619 2.440000e-151 545.0
45 TraesCS6A01G090700 chr4A 97.849 186 3 1 3177 3362 323906545 323906729 1.610000e-83 320.0
46 TraesCS6A01G090700 chr7A 95.567 203 6 3 3162 3362 474287608 474287809 4.480000e-84 322.0
47 TraesCS6A01G090700 chr7A 100.000 34 0 0 2342 2375 108502568 108502535 3.000000e-06 63.9
48 TraesCS6A01G090700 chr1B 97.802 182 4 0 3181 3362 609437860 609438041 7.490000e-82 315.0
49 TraesCS6A01G090700 chrUn 97.283 184 4 1 3179 3362 255038399 255038217 9.690000e-81 311.0
50 TraesCS6A01G090700 chrUn 97.283 184 4 1 3179 3362 354972569 354972387 9.690000e-81 311.0
51 TraesCS6A01G090700 chr1D 90.000 230 21 2 387 615 461344586 461344814 2.710000e-76 296.0
52 TraesCS6A01G090700 chr1D 89.381 226 23 1 390 615 429028392 429028168 2.110000e-72 283.0
53 TraesCS6A01G090700 chr4D 89.655 232 19 5 387 615 52750662 52750433 1.260000e-74 291.0
54 TraesCS6A01G090700 chr7D 92.500 40 3 0 2336 2375 104190009 104190048 1.390000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G090700 chr6A 59319429 59323024 3595 False 6641.000000 6641 100.000000 1 3596 1 chr6A.!!$F1 3595
1 TraesCS6A01G090700 chr6D 44494526 44498321 3795 False 626.857143 2737 91.631714 1 3596 7 chr6D.!!$F1 3595
2 TraesCS6A01G090700 chr6B 113586163 113591349 5186 False 477.071429 1567 89.981714 223 3596 7 chr6B.!!$F2 3373
3 TraesCS6A01G090700 chr2B 7855219 7856666 1447 True 1162.000000 1162 81.391000 1106 2554 1 chr2B.!!$R1 1448
4 TraesCS6A01G090700 chr2B 799580773 799583664 2891 True 280.500000 283 88.626500 385 615 2 chr2B.!!$R2 230
5 TraesCS6A01G090700 chr2D 2930600 2932034 1434 False 1129.000000 1129 81.155000 1097 2528 1 chr2D.!!$F1 1431
6 TraesCS6A01G090700 chr5A 613578376 613580026 1650 False 885.000000 996 87.355000 997 2565 2 chr5A.!!$F2 1568
7 TraesCS6A01G090700 chr5A 52446972 52447767 795 False 464.000000 464 77.549000 1107 1923 1 chr5A.!!$F1 816
8 TraesCS6A01G090700 chr3D 319866881 319867407 526 False 769.000000 769 92.884000 1138 1671 1 chr3D.!!$F1 533
9 TraesCS6A01G090700 chr5D 491407565 491408256 691 False 713.000000 713 85.449000 1104 1795 1 chr5D.!!$F1 691
10 TraesCS6A01G090700 chr5D 491417570 491418186 616 False 612.000000 612 84.814000 1945 2553 1 chr5D.!!$F2 608
11 TraesCS6A01G090700 chr5B 605996378 605997006 628 False 573.000000 573 83.228000 1927 2553 1 chr5B.!!$F1 626
12 TraesCS6A01G090700 chr5B 67492538 67493126 588 True 429.000000 429 79.967000 1107 1713 1 chr5B.!!$R1 606

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
726 1692 0.169009 GCAGGTTCAAGCGTCCATTC 59.831 55.0 0.0 0.0 0.0 2.67 F
1075 2473 0.314302 AGTCAACCTCGTCGTGAAGG 59.686 55.0 0.0 0.0 0.0 3.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1976 4185 0.607217 TCTTACCAGCTCCGACACGA 60.607 55.0 0.0 0.0 0.00 4.35 R
3002 5703 0.040499 TACCCCAACCCTCATTTGGC 59.960 55.0 0.0 0.0 42.06 4.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 520 1.099689 ATGCCAACGAAAATACCCCG 58.900 50.000 0.00 0.00 0.00 5.73
96 576 1.506493 CTGTTCACTGACAGGTGAGC 58.494 55.000 7.51 10.34 45.29 4.26
113 593 4.431131 CCCAATGGTGAGCCGGCT 62.431 66.667 33.48 33.48 37.67 5.52
152 632 2.612200 GCCTTGCGTCACACTAACA 58.388 52.632 0.00 0.00 0.00 2.41
154 634 0.506932 CCTTGCGTCACACTAACACG 59.493 55.000 0.00 0.00 36.60 4.49
157 637 4.329619 CGTCACACTAACACGCCA 57.670 55.556 0.00 0.00 0.00 5.69
158 638 2.595707 CGTCACACTAACACGCCAA 58.404 52.632 0.00 0.00 0.00 4.52
162 642 0.931702 CACACTAACACGCCAACGAA 59.068 50.000 0.00 0.00 43.93 3.85
163 643 1.328069 CACACTAACACGCCAACGAAA 59.672 47.619 0.00 0.00 43.93 3.46
164 644 1.595794 ACACTAACACGCCAACGAAAG 59.404 47.619 0.00 0.00 43.93 2.62
181 661 6.780457 ACGAAAGTACCCTATAAGCTAACA 57.220 37.500 0.00 0.00 46.88 2.41
182 662 7.357429 ACGAAAGTACCCTATAAGCTAACAT 57.643 36.000 0.00 0.00 46.88 2.71
183 663 7.789026 ACGAAAGTACCCTATAAGCTAACATT 58.211 34.615 0.00 0.00 46.88 2.71
184 664 8.262933 ACGAAAGTACCCTATAAGCTAACATTT 58.737 33.333 0.00 0.00 46.88 2.32
185 665 9.106070 CGAAAGTACCCTATAAGCTAACATTTT 57.894 33.333 0.00 0.00 0.00 1.82
188 668 8.097791 AGTACCCTATAAGCTAACATTTTCCA 57.902 34.615 0.00 0.00 0.00 3.53
189 669 8.724310 AGTACCCTATAAGCTAACATTTTCCAT 58.276 33.333 0.00 0.00 0.00 3.41
192 672 9.350951 ACCCTATAAGCTAACATTTTCCATAAC 57.649 33.333 0.00 0.00 0.00 1.89
193 673 9.349713 CCCTATAAGCTAACATTTTCCATAACA 57.650 33.333 0.00 0.00 0.00 2.41
198 678 7.524717 AGCTAACATTTTCCATAACAGTTGT 57.475 32.000 0.00 0.00 0.00 3.32
199 679 7.951591 AGCTAACATTTTCCATAACAGTTGTT 58.048 30.769 2.75 2.75 41.73 2.83
200 680 9.073475 AGCTAACATTTTCCATAACAGTTGTTA 57.927 29.630 7.14 7.14 43.71 2.41
205 685 9.528018 ACATTTTCCATAACAGTTGTTACTTTG 57.472 29.630 6.85 2.77 42.55 2.77
206 686 9.528018 CATTTTCCATAACAGTTGTTACTTTGT 57.472 29.630 6.85 0.00 42.55 2.83
210 690 8.911918 TCCATAACAGTTGTTACTTTGTATGT 57.088 30.769 6.85 0.00 42.55 2.29
211 691 8.779303 TCCATAACAGTTGTTACTTTGTATGTG 58.221 33.333 6.85 0.00 42.55 3.21
212 692 8.779303 CCATAACAGTTGTTACTTTGTATGTGA 58.221 33.333 6.85 0.00 42.55 3.58
213 693 9.594038 CATAACAGTTGTTACTTTGTATGTGAC 57.406 33.333 6.85 0.00 42.55 3.67
214 694 6.613755 ACAGTTGTTACTTTGTATGTGACC 57.386 37.500 0.00 0.00 30.26 4.02
215 695 5.529800 ACAGTTGTTACTTTGTATGTGACCC 59.470 40.000 0.00 0.00 30.26 4.46
216 696 5.529430 CAGTTGTTACTTTGTATGTGACCCA 59.471 40.000 0.00 0.00 30.26 4.51
217 697 6.038825 CAGTTGTTACTTTGTATGTGACCCAA 59.961 38.462 0.00 0.00 30.26 4.12
218 698 6.038936 AGTTGTTACTTTGTATGTGACCCAAC 59.961 38.462 0.00 0.00 0.00 3.77
219 699 5.437946 TGTTACTTTGTATGTGACCCAACA 58.562 37.500 0.00 0.00 0.00 3.33
220 700 5.529430 TGTTACTTTGTATGTGACCCAACAG 59.471 40.000 0.00 0.00 32.52 3.16
221 701 4.164843 ACTTTGTATGTGACCCAACAGT 57.835 40.909 0.00 0.00 32.52 3.55
222 702 4.134563 ACTTTGTATGTGACCCAACAGTC 58.865 43.478 0.00 0.00 37.28 3.51
223 703 4.141482 ACTTTGTATGTGACCCAACAGTCT 60.141 41.667 0.00 0.00 37.66 3.24
224 704 3.678056 TGTATGTGACCCAACAGTCTC 57.322 47.619 0.00 0.00 37.66 3.36
226 706 3.582647 TGTATGTGACCCAACAGTCTCAT 59.417 43.478 12.26 12.26 46.87 2.90
305 1032 1.298993 CTGTCAGCCAGCATGTCCT 59.701 57.895 0.00 0.00 33.59 3.85
333 1060 2.546795 GCAAGCAGGCTCTACGATACAT 60.547 50.000 0.00 0.00 0.00 2.29
339 1066 4.797604 GCAGGCTCTACGATACATTGACAT 60.798 45.833 0.00 0.00 0.00 3.06
352 1079 4.024143 GACATGCCACGTGCGCAA 62.024 61.111 27.49 15.65 45.60 4.85
353 1080 4.326766 ACATGCCACGTGCGCAAC 62.327 61.111 27.49 5.69 45.60 4.17
473 1201 7.490962 ACATCGACATTACAAGACTGAAAAA 57.509 32.000 0.00 0.00 0.00 1.94
522 1251 3.878103 GCGTATGTCTCTCTCCACTAAGA 59.122 47.826 0.00 0.00 0.00 2.10
545 1274 5.574970 AAAAGGAGACAGATCACCTCTTT 57.425 39.130 0.00 0.00 44.45 2.52
578 1307 1.227350 CGGCTCCATCGCTGATCAA 60.227 57.895 0.00 0.00 38.57 2.57
646 1458 1.480205 GCCATTGCGACATATTGCAC 58.520 50.000 0.00 0.00 45.37 4.57
662 1474 3.157932 TGCACAAGTTTTTGCACTACC 57.842 42.857 5.02 0.00 43.79 3.18
689 1503 3.743911 TGTATTGTACAACCACAAGCTCG 59.256 43.478 18.01 0.00 41.48 5.03
692 1506 2.479837 TGTACAACCACAAGCTCGAAG 58.520 47.619 0.00 0.00 0.00 3.79
726 1692 0.169009 GCAGGTTCAAGCGTCCATTC 59.831 55.000 0.00 0.00 0.00 2.67
760 2094 4.458295 TGTACCTAGAAGACTGAGAAACGG 59.542 45.833 0.00 0.00 0.00 4.44
768 2102 2.966516 AGACTGAGAAACGGAAAGGAGT 59.033 45.455 0.00 0.00 0.00 3.85
769 2103 4.150359 AGACTGAGAAACGGAAAGGAGTA 58.850 43.478 0.00 0.00 0.00 2.59
770 2104 4.022155 AGACTGAGAAACGGAAAGGAGTAC 60.022 45.833 0.00 0.00 0.00 2.73
786 2123 4.409901 AGGAGTACTACCAGGTAGAGAGAC 59.590 50.000 30.45 20.50 38.29 3.36
811 2148 2.280592 ACCAAACGACGGCTGACC 60.281 61.111 0.00 0.00 0.00 4.02
822 2160 1.890894 GGCTGACCGAAGCTGACTA 59.109 57.895 0.00 0.00 43.06 2.59
824 2162 1.634702 GCTGACCGAAGCTGACTAAG 58.365 55.000 0.00 0.00 40.20 2.18
869 2211 0.872388 GAAATGGCGACGACCAAACT 59.128 50.000 13.63 3.41 44.65 2.66
903 2245 1.125093 TCTTCCATCCACCCACACGT 61.125 55.000 0.00 0.00 0.00 4.49
924 2268 2.654863 ACGCTGCTATAAATTTGCCCT 58.345 42.857 0.00 0.00 0.00 5.19
925 2269 2.358898 ACGCTGCTATAAATTTGCCCTG 59.641 45.455 0.00 0.00 0.00 4.45
926 2270 2.287788 CGCTGCTATAAATTTGCCCTGG 60.288 50.000 0.00 0.00 0.00 4.45
927 2271 2.546584 GCTGCTATAAATTTGCCCTGGC 60.547 50.000 0.00 0.00 42.35 4.85
960 2304 5.301551 ACTTGTTTCATCATGCAACAACCTA 59.698 36.000 11.07 0.00 38.26 3.08
962 2306 4.168760 GTTTCATCATGCAACAACCTAGC 58.831 43.478 0.00 0.00 0.00 3.42
963 2307 3.354948 TCATCATGCAACAACCTAGCT 57.645 42.857 0.00 0.00 0.00 3.32
964 2308 3.273434 TCATCATGCAACAACCTAGCTC 58.727 45.455 0.00 0.00 0.00 4.09
965 2309 1.725641 TCATGCAACAACCTAGCTCG 58.274 50.000 0.00 0.00 0.00 5.03
967 2311 2.232696 TCATGCAACAACCTAGCTCGTA 59.767 45.455 0.00 0.00 0.00 3.43
968 2312 2.823924 TGCAACAACCTAGCTCGTAA 57.176 45.000 0.00 0.00 0.00 3.18
1075 2473 0.314302 AGTCAACCTCGTCGTGAAGG 59.686 55.000 0.00 0.00 0.00 3.46
1976 4185 2.126071 CACGACGCTCGAATGGGT 60.126 61.111 13.06 0.00 43.74 4.51
1996 4205 0.456312 CGTGTCGGAGCTGGTAAGAC 60.456 60.000 0.00 7.09 0.00 3.01
2086 4301 2.825836 GCGACATGGGAAGGCTGG 60.826 66.667 0.00 0.00 0.00 4.85
2184 4582 4.838152 CGGTGCGAGGTGATGGGG 62.838 72.222 0.00 0.00 0.00 4.96
2507 5012 0.108329 ATAACCGTGCGGAGGAAGTG 60.108 55.000 18.16 0.00 38.96 3.16
2533 5044 2.969781 TGCTGCACGCTACGCAAA 60.970 55.556 0.00 0.00 39.30 3.68
2592 5108 1.621814 TCCACTTCTTCCGTTAGGGTG 59.378 52.381 0.00 0.00 38.33 4.61
2604 5142 4.887071 TCCGTTAGGGTGTAATACGTACAT 59.113 41.667 0.00 0.00 39.59 2.29
2689 5390 7.480542 GTCATACAAATTACGCCACTGTAAAAG 59.519 37.037 0.00 0.00 37.81 2.27
2691 5392 5.754778 ACAAATTACGCCACTGTAAAAGTC 58.245 37.500 0.00 0.00 36.83 3.01
2692 5393 5.529800 ACAAATTACGCCACTGTAAAAGTCT 59.470 36.000 0.00 0.00 36.83 3.24
2693 5394 6.038936 ACAAATTACGCCACTGTAAAAGTCTT 59.961 34.615 0.00 0.00 36.83 3.01
2694 5395 6.628919 AATTACGCCACTGTAAAAGTCTTT 57.371 33.333 0.00 0.00 36.83 2.52
2696 5397 4.976224 ACGCCACTGTAAAAGTCTTTTT 57.024 36.364 15.53 3.15 36.83 1.94
2698 5399 6.439675 ACGCCACTGTAAAAGTCTTTTTAA 57.560 33.333 15.53 4.41 39.69 1.52
2699 5400 6.492254 ACGCCACTGTAAAAGTCTTTTTAAG 58.508 36.000 15.53 14.57 39.69 1.85
2700 5401 6.094464 ACGCCACTGTAAAAGTCTTTTTAAGT 59.906 34.615 15.53 15.12 39.69 2.24
2701 5402 7.280652 ACGCCACTGTAAAAGTCTTTTTAAGTA 59.719 33.333 15.53 0.00 39.69 2.24
2702 5403 7.585210 CGCCACTGTAAAAGTCTTTTTAAGTAC 59.415 37.037 15.53 8.15 39.69 2.73
2703 5404 8.400186 GCCACTGTAAAAGTCTTTTTAAGTACA 58.600 33.333 15.53 11.89 39.69 2.90
2753 5454 8.500753 TTTAAGTACAATTTCGATGGTATGCT 57.499 30.769 0.00 0.00 0.00 3.79
2757 5458 8.500753 AGTACAATTTCGATGGTATGCTTTTA 57.499 30.769 0.00 0.00 0.00 1.52
2758 5459 8.952278 AGTACAATTTCGATGGTATGCTTTTAA 58.048 29.630 0.00 0.00 0.00 1.52
2760 5461 7.826690 ACAATTTCGATGGTATGCTTTTAAGT 58.173 30.769 0.00 0.00 0.00 2.24
2761 5462 8.952278 ACAATTTCGATGGTATGCTTTTAAGTA 58.048 29.630 0.00 0.00 0.00 2.24
2764 5465 7.908827 TTCGATGGTATGCTTTTAAGTACAA 57.091 32.000 0.00 0.00 0.00 2.41
2767 5468 8.952278 TCGATGGTATGCTTTTAAGTACAATTT 58.048 29.630 0.00 0.00 0.00 1.82
2768 5469 9.221775 CGATGGTATGCTTTTAAGTACAATTTC 57.778 33.333 0.00 0.00 0.00 2.17
2769 5470 9.221775 GATGGTATGCTTTTAAGTACAATTTCG 57.778 33.333 0.00 0.00 0.00 3.46
2770 5471 8.325421 TGGTATGCTTTTAAGTACAATTTCGA 57.675 30.769 0.00 0.00 0.00 3.71
2771 5472 8.952278 TGGTATGCTTTTAAGTACAATTTCGAT 58.048 29.630 0.00 0.00 0.00 3.59
2773 5474 9.221775 GTATGCTTTTAAGTACAATTTCGATGG 57.778 33.333 0.00 0.00 0.00 3.51
2775 5476 8.325421 TGCTTTTAAGTACAATTTCGATGGTA 57.675 30.769 0.00 0.00 0.00 3.25
2776 5477 8.952278 TGCTTTTAAGTACAATTTCGATGGTAT 58.048 29.630 0.00 0.00 0.00 2.73
2777 5478 9.221775 GCTTTTAAGTACAATTTCGATGGTATG 57.778 33.333 0.00 0.00 0.00 2.39
2829 5530 5.223449 AGTAATTCAAGTCCGGACAAAGA 57.777 39.130 35.00 24.95 0.00 2.52
2830 5531 5.805728 AGTAATTCAAGTCCGGACAAAGAT 58.194 37.500 35.00 20.04 0.00 2.40
2831 5532 6.238648 AGTAATTCAAGTCCGGACAAAGATT 58.761 36.000 35.00 26.95 0.00 2.40
2832 5533 7.391620 AGTAATTCAAGTCCGGACAAAGATTA 58.608 34.615 35.00 26.06 0.00 1.75
2833 5534 6.743575 AATTCAAGTCCGGACAAAGATTAG 57.256 37.500 35.00 15.10 0.00 1.73
2834 5535 5.477607 TTCAAGTCCGGACAAAGATTAGA 57.522 39.130 35.00 16.97 0.00 2.10
2835 5536 5.477607 TCAAGTCCGGACAAAGATTAGAA 57.522 39.130 35.00 7.67 0.00 2.10
2836 5537 5.235516 TCAAGTCCGGACAAAGATTAGAAC 58.764 41.667 35.00 5.10 0.00 3.01
2837 5538 4.203654 AGTCCGGACAAAGATTAGAACC 57.796 45.455 35.00 3.97 0.00 3.62
2838 5539 3.055312 AGTCCGGACAAAGATTAGAACCC 60.055 47.826 35.00 3.26 0.00 4.11
2839 5540 3.055312 GTCCGGACAAAGATTAGAACCCT 60.055 47.826 29.75 0.00 0.00 4.34
2840 5541 3.197116 TCCGGACAAAGATTAGAACCCTC 59.803 47.826 0.00 0.00 0.00 4.30
2841 5542 3.055385 CCGGACAAAGATTAGAACCCTCA 60.055 47.826 0.00 0.00 0.00 3.86
2842 5543 4.564821 CCGGACAAAGATTAGAACCCTCAA 60.565 45.833 0.00 0.00 0.00 3.02
2843 5544 5.001232 CGGACAAAGATTAGAACCCTCAAA 58.999 41.667 0.00 0.00 0.00 2.69
2844 5545 5.106673 CGGACAAAGATTAGAACCCTCAAAC 60.107 44.000 0.00 0.00 0.00 2.93
2845 5546 5.183331 GGACAAAGATTAGAACCCTCAAACC 59.817 44.000 0.00 0.00 0.00 3.27
2846 5547 5.077564 ACAAAGATTAGAACCCTCAAACCC 58.922 41.667 0.00 0.00 0.00 4.11
2847 5548 5.076873 CAAAGATTAGAACCCTCAAACCCA 58.923 41.667 0.00 0.00 0.00 4.51
2848 5549 5.333566 AAGATTAGAACCCTCAAACCCAA 57.666 39.130 0.00 0.00 0.00 4.12
2849 5550 4.663334 AGATTAGAACCCTCAAACCCAAC 58.337 43.478 0.00 0.00 0.00 3.77
2850 5551 2.963599 TAGAACCCTCAAACCCAACC 57.036 50.000 0.00 0.00 0.00 3.77
2851 5552 0.187606 AGAACCCTCAAACCCAACCC 59.812 55.000 0.00 0.00 0.00 4.11
2852 5553 0.187606 GAACCCTCAAACCCAACCCT 59.812 55.000 0.00 0.00 0.00 4.34
2853 5554 0.639943 AACCCTCAAACCCAACCCTT 59.360 50.000 0.00 0.00 0.00 3.95
2854 5555 1.536644 ACCCTCAAACCCAACCCTTA 58.463 50.000 0.00 0.00 0.00 2.69
2855 5556 2.078611 ACCCTCAAACCCAACCCTTAT 58.921 47.619 0.00 0.00 0.00 1.73
2856 5557 3.270812 ACCCTCAAACCCAACCCTTATA 58.729 45.455 0.00 0.00 0.00 0.98
2857 5558 3.663632 ACCCTCAAACCCAACCCTTATAA 59.336 43.478 0.00 0.00 0.00 0.98
2858 5559 4.021229 CCCTCAAACCCAACCCTTATAAC 58.979 47.826 0.00 0.00 0.00 1.89
2859 5560 3.692593 CCTCAAACCCAACCCTTATAACG 59.307 47.826 0.00 0.00 0.00 3.18
2860 5561 3.688235 TCAAACCCAACCCTTATAACGG 58.312 45.455 0.00 0.00 0.00 4.44
2861 5562 3.330110 TCAAACCCAACCCTTATAACGGA 59.670 43.478 7.42 0.00 0.00 4.69
2862 5563 4.080687 CAAACCCAACCCTTATAACGGAA 58.919 43.478 7.42 0.00 0.00 4.30
2863 5564 4.596354 AACCCAACCCTTATAACGGAAT 57.404 40.909 7.42 0.00 0.00 3.01
2864 5565 5.713760 AACCCAACCCTTATAACGGAATA 57.286 39.130 7.42 0.00 0.00 1.75
2865 5566 5.917545 ACCCAACCCTTATAACGGAATAT 57.082 39.130 7.42 0.00 0.00 1.28
2866 5567 6.270219 ACCCAACCCTTATAACGGAATATT 57.730 37.500 7.42 0.00 0.00 1.28
2867 5568 6.301486 ACCCAACCCTTATAACGGAATATTC 58.699 40.000 6.93 6.93 0.00 1.75
2868 5569 5.708697 CCCAACCCTTATAACGGAATATTCC 59.291 44.000 22.63 22.63 44.05 3.01
2869 5570 6.466759 CCCAACCCTTATAACGGAATATTCCT 60.467 42.308 27.86 15.49 45.33 3.36
2870 5571 6.653740 CCAACCCTTATAACGGAATATTCCTC 59.346 42.308 27.86 7.21 45.33 3.71
2871 5572 7.221450 CAACCCTTATAACGGAATATTCCTCA 58.779 38.462 27.86 15.23 45.33 3.86
2872 5573 7.569599 ACCCTTATAACGGAATATTCCTCAT 57.430 36.000 27.86 19.92 45.33 2.90
2873 5574 7.394816 ACCCTTATAACGGAATATTCCTCATG 58.605 38.462 27.86 16.77 45.33 3.07
2874 5575 7.236847 ACCCTTATAACGGAATATTCCTCATGA 59.763 37.037 27.86 15.10 45.33 3.07
2875 5576 8.100791 CCCTTATAACGGAATATTCCTCATGAA 58.899 37.037 27.86 16.57 45.33 2.57
2876 5577 8.936864 CCTTATAACGGAATATTCCTCATGAAC 58.063 37.037 27.86 3.86 45.33 3.18
2877 5578 8.528917 TTATAACGGAATATTCCTCATGAACG 57.471 34.615 27.86 16.20 45.33 3.95
2878 5579 4.665833 ACGGAATATTCCTCATGAACGA 57.334 40.909 27.86 0.00 45.33 3.85
2879 5580 4.369182 ACGGAATATTCCTCATGAACGAC 58.631 43.478 27.86 2.08 45.33 4.34
2880 5581 3.425525 CGGAATATTCCTCATGAACGACG 59.574 47.826 27.86 9.75 45.33 5.12
2881 5582 4.369182 GGAATATTCCTCATGAACGACGT 58.631 43.478 24.74 0.00 44.11 4.34
2882 5583 4.809426 GGAATATTCCTCATGAACGACGTT 59.191 41.667 24.74 14.11 44.11 3.99
2883 5584 5.276868 GGAATATTCCTCATGAACGACGTTG 60.277 44.000 24.74 4.73 44.11 4.10
2884 5585 2.519377 TTCCTCATGAACGACGTTGT 57.481 45.000 19.60 1.48 0.00 3.32
2885 5586 2.060326 TCCTCATGAACGACGTTGTC 57.940 50.000 19.60 5.24 0.00 3.18
2935 5636 4.208686 GGCGACAGGGGCGACTAG 62.209 72.222 0.00 0.00 33.04 2.57
2976 5677 3.739613 GCGGGGGTTGGGAGGATT 61.740 66.667 0.00 0.00 0.00 3.01
2977 5678 3.096357 CGGGGGTTGGGAGGATTT 58.904 61.111 0.00 0.00 0.00 2.17
2978 5679 1.386550 CGGGGGTTGGGAGGATTTT 59.613 57.895 0.00 0.00 0.00 1.82
2979 5680 0.252057 CGGGGGTTGGGAGGATTTTT 60.252 55.000 0.00 0.00 0.00 1.94
2994 5695 2.740826 TTTTTCCTCCCGCGCGAG 60.741 61.111 34.63 20.97 0.00 5.03
2995 5696 3.524648 TTTTTCCTCCCGCGCGAGT 62.525 57.895 34.63 0.00 0.00 4.18
2996 5697 2.157305 TTTTTCCTCCCGCGCGAGTA 62.157 55.000 34.63 15.06 0.00 2.59
2997 5698 1.952102 TTTTCCTCCCGCGCGAGTAT 61.952 55.000 34.63 0.00 0.00 2.12
2998 5699 1.102809 TTTCCTCCCGCGCGAGTATA 61.103 55.000 34.63 10.96 0.00 1.47
2999 5700 1.102809 TTCCTCCCGCGCGAGTATAA 61.103 55.000 34.63 16.70 0.00 0.98
3000 5701 1.371389 CCTCCCGCGCGAGTATAAC 60.371 63.158 34.63 0.00 0.00 1.89
3001 5702 1.371389 CTCCCGCGCGAGTATAACC 60.371 63.158 34.63 0.00 0.00 2.85
3002 5703 2.728383 CCCGCGCGAGTATAACCG 60.728 66.667 34.63 10.97 0.00 4.44
3009 5710 2.663279 GCGAGTATAACCGCCAAATG 57.337 50.000 8.35 0.00 45.06 2.32
3010 5711 2.206750 GCGAGTATAACCGCCAAATGA 58.793 47.619 8.35 0.00 45.06 2.57
3011 5712 2.221055 GCGAGTATAACCGCCAAATGAG 59.779 50.000 8.35 0.00 45.06 2.90
3012 5713 2.800544 CGAGTATAACCGCCAAATGAGG 59.199 50.000 0.00 0.00 0.00 3.86
3013 5714 3.139077 GAGTATAACCGCCAAATGAGGG 58.861 50.000 0.00 0.00 0.00 4.30
3014 5715 2.508300 AGTATAACCGCCAAATGAGGGT 59.492 45.455 0.00 0.00 0.00 4.34
3015 5716 2.525105 ATAACCGCCAAATGAGGGTT 57.475 45.000 11.18 11.18 44.49 4.11
3016 5717 1.540267 TAACCGCCAAATGAGGGTTG 58.460 50.000 14.43 0.00 42.44 3.77
3018 5719 2.350458 CCGCCAAATGAGGGTTGGG 61.350 63.158 5.41 0.00 44.87 4.12
3019 5720 3.712287 GCCAAATGAGGGTTGGGG 58.288 61.111 5.41 0.00 44.87 4.96
3020 5721 1.229177 GCCAAATGAGGGTTGGGGT 60.229 57.895 5.41 0.00 44.87 4.95
3021 5722 0.040499 GCCAAATGAGGGTTGGGGTA 59.960 55.000 5.41 0.00 44.87 3.69
3022 5723 1.959989 GCCAAATGAGGGTTGGGGTAG 60.960 57.143 5.41 0.00 44.87 3.18
3023 5724 1.341976 CCAAATGAGGGTTGGGGTAGG 60.342 57.143 0.00 0.00 41.64 3.18
3024 5725 1.357761 CAAATGAGGGTTGGGGTAGGT 59.642 52.381 0.00 0.00 0.00 3.08
3025 5726 1.768265 AATGAGGGTTGGGGTAGGTT 58.232 50.000 0.00 0.00 0.00 3.50
3026 5727 1.768265 ATGAGGGTTGGGGTAGGTTT 58.232 50.000 0.00 0.00 0.00 3.27
3027 5728 1.536644 TGAGGGTTGGGGTAGGTTTT 58.463 50.000 0.00 0.00 0.00 2.43
3028 5729 1.146152 TGAGGGTTGGGGTAGGTTTTG 59.854 52.381 0.00 0.00 0.00 2.44
3029 5730 0.178944 AGGGTTGGGGTAGGTTTTGC 60.179 55.000 0.00 0.00 0.00 3.68
3030 5731 0.178944 GGGTTGGGGTAGGTTTTGCT 60.179 55.000 0.00 0.00 0.00 3.91
3031 5732 1.254026 GGTTGGGGTAGGTTTTGCTC 58.746 55.000 0.00 0.00 0.00 4.26
3032 5733 1.203013 GGTTGGGGTAGGTTTTGCTCT 60.203 52.381 0.00 0.00 0.00 4.09
3033 5734 2.160205 GTTGGGGTAGGTTTTGCTCTC 58.840 52.381 0.00 0.00 0.00 3.20
3034 5735 0.696501 TGGGGTAGGTTTTGCTCTCC 59.303 55.000 0.00 0.00 0.00 3.71
3035 5736 0.696501 GGGGTAGGTTTTGCTCTCCA 59.303 55.000 0.00 0.00 0.00 3.86
3036 5737 1.074889 GGGGTAGGTTTTGCTCTCCAA 59.925 52.381 0.00 0.00 0.00 3.53
3037 5738 2.160205 GGGTAGGTTTTGCTCTCCAAC 58.840 52.381 0.00 0.00 31.97 3.77
3038 5739 2.160205 GGTAGGTTTTGCTCTCCAACC 58.840 52.381 0.00 0.00 40.40 3.77
3039 5740 2.160205 GTAGGTTTTGCTCTCCAACCC 58.840 52.381 0.00 0.00 40.92 4.11
3040 5741 0.853530 AGGTTTTGCTCTCCAACCCT 59.146 50.000 0.00 0.00 40.92 4.34
3041 5742 1.217942 AGGTTTTGCTCTCCAACCCTT 59.782 47.619 0.00 0.00 40.92 3.95
3042 5743 2.445525 AGGTTTTGCTCTCCAACCCTTA 59.554 45.455 0.00 0.00 40.92 2.69
3043 5744 2.557056 GGTTTTGCTCTCCAACCCTTAC 59.443 50.000 0.00 0.00 34.90 2.34
3044 5745 3.487372 GTTTTGCTCTCCAACCCTTACT 58.513 45.455 0.00 0.00 31.97 2.24
3045 5746 3.876309 TTTGCTCTCCAACCCTTACTT 57.124 42.857 0.00 0.00 31.97 2.24
3046 5747 3.876309 TTGCTCTCCAACCCTTACTTT 57.124 42.857 0.00 0.00 0.00 2.66
3047 5748 3.876309 TGCTCTCCAACCCTTACTTTT 57.124 42.857 0.00 0.00 0.00 2.27
3048 5749 4.986054 TGCTCTCCAACCCTTACTTTTA 57.014 40.909 0.00 0.00 0.00 1.52
3049 5750 5.313280 TGCTCTCCAACCCTTACTTTTAA 57.687 39.130 0.00 0.00 0.00 1.52
3050 5751 5.313712 TGCTCTCCAACCCTTACTTTTAAG 58.686 41.667 0.00 0.00 35.35 1.85
3064 5765 7.569599 TTACTTTTAAGGATTGGGAGAGAGT 57.430 36.000 0.00 0.00 0.00 3.24
3065 5766 6.455690 ACTTTTAAGGATTGGGAGAGAGTT 57.544 37.500 0.00 0.00 0.00 3.01
3066 5767 6.853490 ACTTTTAAGGATTGGGAGAGAGTTT 58.147 36.000 0.00 0.00 0.00 2.66
3067 5768 6.717084 ACTTTTAAGGATTGGGAGAGAGTTTG 59.283 38.462 0.00 0.00 0.00 2.93
3068 5769 6.448369 TTTAAGGATTGGGAGAGAGTTTGA 57.552 37.500 0.00 0.00 0.00 2.69
3069 5770 4.566426 AAGGATTGGGAGAGAGTTTGAG 57.434 45.455 0.00 0.00 0.00 3.02
3070 5771 2.843113 AGGATTGGGAGAGAGTTTGAGG 59.157 50.000 0.00 0.00 0.00 3.86
3071 5772 2.092699 GGATTGGGAGAGAGTTTGAGGG 60.093 54.545 0.00 0.00 0.00 4.30
3072 5773 2.118403 TTGGGAGAGAGTTTGAGGGT 57.882 50.000 0.00 0.00 0.00 4.34
3073 5774 2.118403 TGGGAGAGAGTTTGAGGGTT 57.882 50.000 0.00 0.00 0.00 4.11
3074 5775 1.699634 TGGGAGAGAGTTTGAGGGTTG 59.300 52.381 0.00 0.00 0.00 3.77
3075 5776 1.003696 GGGAGAGAGTTTGAGGGTTGG 59.996 57.143 0.00 0.00 0.00 3.77
3076 5777 1.978580 GGAGAGAGTTTGAGGGTTGGA 59.021 52.381 0.00 0.00 0.00 3.53
3077 5778 2.289756 GGAGAGAGTTTGAGGGTTGGAC 60.290 54.545 0.00 0.00 0.00 4.02
3078 5779 1.700186 AGAGAGTTTGAGGGTTGGACC 59.300 52.381 0.00 0.00 37.60 4.46
3079 5780 1.700186 GAGAGTTTGAGGGTTGGACCT 59.300 52.381 0.00 0.00 45.57 3.85
3080 5781 2.106684 GAGAGTTTGAGGGTTGGACCTT 59.893 50.000 0.00 0.00 42.10 3.50
3081 5782 2.514160 AGAGTTTGAGGGTTGGACCTTT 59.486 45.455 0.00 0.00 42.10 3.11
3082 5783 3.720002 AGAGTTTGAGGGTTGGACCTTTA 59.280 43.478 0.00 0.00 42.10 1.85
3083 5784 4.167307 AGAGTTTGAGGGTTGGACCTTTAA 59.833 41.667 0.00 0.00 42.10 1.52
3084 5785 4.874199 AGTTTGAGGGTTGGACCTTTAAA 58.126 39.130 0.00 0.00 42.10 1.52
3085 5786 5.274015 AGTTTGAGGGTTGGACCTTTAAAA 58.726 37.500 1.69 0.00 42.10 1.52
3086 5787 5.722441 AGTTTGAGGGTTGGACCTTTAAAAA 59.278 36.000 1.69 0.00 42.10 1.94
3107 5808 6.816616 AAAAATTGAGGGTTTGAGGGTTAA 57.183 33.333 0.00 0.00 0.00 2.01
3108 5809 6.419484 AAAATTGAGGGTTTGAGGGTTAAG 57.581 37.500 0.00 0.00 0.00 1.85
3109 5810 3.518992 TTGAGGGTTTGAGGGTTAAGG 57.481 47.619 0.00 0.00 0.00 2.69
3110 5811 1.708551 TGAGGGTTTGAGGGTTAAGGG 59.291 52.381 0.00 0.00 0.00 3.95
3111 5812 1.005569 GAGGGTTTGAGGGTTAAGGGG 59.994 57.143 0.00 0.00 0.00 4.79
3112 5813 0.781920 GGGTTTGAGGGTTAAGGGGT 59.218 55.000 0.00 0.00 0.00 4.95
3113 5814 1.148446 GGGTTTGAGGGTTAAGGGGTT 59.852 52.381 0.00 0.00 0.00 4.11
3114 5815 2.522185 GGTTTGAGGGTTAAGGGGTTC 58.478 52.381 0.00 0.00 0.00 3.62
3115 5816 2.109480 GGTTTGAGGGTTAAGGGGTTCT 59.891 50.000 0.00 0.00 0.00 3.01
3116 5817 3.331591 GGTTTGAGGGTTAAGGGGTTCTA 59.668 47.826 0.00 0.00 0.00 2.10
3117 5818 4.202599 GGTTTGAGGGTTAAGGGGTTCTAA 60.203 45.833 0.00 0.00 0.00 2.10
3118 5819 5.517833 GGTTTGAGGGTTAAGGGGTTCTAAT 60.518 44.000 0.00 0.00 0.00 1.73
3119 5820 5.446260 TTGAGGGTTAAGGGGTTCTAATC 57.554 43.478 0.00 0.00 0.00 1.75
3120 5821 4.706616 TGAGGGTTAAGGGGTTCTAATCT 58.293 43.478 0.00 0.00 0.00 2.40
3121 5822 5.857134 TGAGGGTTAAGGGGTTCTAATCTA 58.143 41.667 0.00 0.00 0.00 1.98
3122 5823 5.664457 TGAGGGTTAAGGGGTTCTAATCTAC 59.336 44.000 0.00 0.00 0.00 2.59
3123 5824 4.652881 AGGGTTAAGGGGTTCTAATCTACG 59.347 45.833 0.00 0.00 0.00 3.51
3124 5825 4.202295 GGGTTAAGGGGTTCTAATCTACGG 60.202 50.000 0.00 0.00 0.00 4.02
3125 5826 4.375272 GTTAAGGGGTTCTAATCTACGGC 58.625 47.826 0.00 0.00 0.00 5.68
3126 5827 2.473576 AGGGGTTCTAATCTACGGCT 57.526 50.000 0.00 0.00 0.00 5.52
3127 5828 2.760581 AGGGGTTCTAATCTACGGCTT 58.239 47.619 0.00 0.00 0.00 4.35
3128 5829 3.113043 AGGGGTTCTAATCTACGGCTTT 58.887 45.455 0.00 0.00 0.00 3.51
3129 5830 3.522343 AGGGGTTCTAATCTACGGCTTTT 59.478 43.478 0.00 0.00 0.00 2.27
3130 5831 4.018688 AGGGGTTCTAATCTACGGCTTTTT 60.019 41.667 0.00 0.00 0.00 1.94
3174 5875 9.996554 AAAATCAGTTATTTTTAGGGGTTTGAG 57.003 29.630 0.00 0.00 43.75 3.02
3175 5876 7.718334 ATCAGTTATTTTTAGGGGTTTGAGG 57.282 36.000 0.00 0.00 0.00 3.86
3176 5877 6.014012 TCAGTTATTTTTAGGGGTTTGAGGG 58.986 40.000 0.00 0.00 0.00 4.30
3177 5878 4.775780 AGTTATTTTTAGGGGTTTGAGGGC 59.224 41.667 0.00 0.00 0.00 5.19
3178 5879 3.560357 ATTTTTAGGGGTTTGAGGGCT 57.440 42.857 0.00 0.00 0.00 5.19
3179 5880 2.597578 TTTTAGGGGTTTGAGGGCTC 57.402 50.000 0.00 0.00 0.00 4.70
3180 5881 1.755200 TTTAGGGGTTTGAGGGCTCT 58.245 50.000 0.00 0.00 0.00 4.09
3181 5882 2.653543 TTAGGGGTTTGAGGGCTCTA 57.346 50.000 0.00 0.00 0.00 2.43
3182 5883 1.875488 TAGGGGTTTGAGGGCTCTAC 58.125 55.000 0.00 0.00 0.00 2.59
3183 5884 0.119358 AGGGGTTTGAGGGCTCTACT 59.881 55.000 0.00 0.00 0.00 2.57
3184 5885 1.365028 AGGGGTTTGAGGGCTCTACTA 59.635 52.381 0.00 0.00 0.00 1.82
3185 5886 2.193993 GGGGTTTGAGGGCTCTACTAA 58.806 52.381 0.00 0.00 0.00 2.24
3186 5887 2.574824 GGGGTTTGAGGGCTCTACTAAA 59.425 50.000 0.00 0.00 0.00 1.85
3187 5888 3.009805 GGGGTTTGAGGGCTCTACTAAAA 59.990 47.826 0.00 0.00 0.00 1.52
3188 5889 4.507869 GGGGTTTGAGGGCTCTACTAAAAA 60.508 45.833 0.00 0.00 0.00 1.94
3204 5905 2.601664 AAAAAGGCAACCTGGTGCA 58.398 47.368 18.44 0.00 46.81 4.57
3205 5906 1.130777 AAAAAGGCAACCTGGTGCAT 58.869 45.000 18.44 11.55 46.81 3.96
3206 5907 0.393820 AAAAGGCAACCTGGTGCATG 59.606 50.000 18.44 7.86 46.81 4.06
3207 5908 0.760189 AAAGGCAACCTGGTGCATGT 60.760 50.000 18.44 7.83 46.81 3.21
3208 5909 0.112218 AAGGCAACCTGGTGCATGTA 59.888 50.000 18.44 0.00 46.81 2.29
3209 5910 0.322816 AGGCAACCTGGTGCATGTAG 60.323 55.000 18.44 0.00 46.81 2.74
3210 5911 1.508088 GCAACCTGGTGCATGTAGC 59.492 57.895 6.00 6.00 44.29 3.58
3211 5912 0.962356 GCAACCTGGTGCATGTAGCT 60.962 55.000 14.15 0.00 44.29 3.32
3212 5913 1.089920 CAACCTGGTGCATGTAGCTC 58.910 55.000 14.15 0.00 45.94 4.09
3218 5919 1.450312 GTGCATGTAGCTCCCGCTT 60.450 57.895 0.00 0.00 46.47 4.68
3219 5920 1.450134 TGCATGTAGCTCCCGCTTG 60.450 57.895 0.00 0.00 46.47 4.01
3220 5921 2.828128 GCATGTAGCTCCCGCTTGC 61.828 63.158 0.00 0.00 46.47 4.01
3221 5922 2.202932 ATGTAGCTCCCGCTTGCG 60.203 61.111 8.14 8.14 46.47 4.85
3224 5925 4.819761 TAGCTCCCGCTTGCGCAG 62.820 66.667 11.31 6.32 46.47 5.18
3236 5937 4.785453 GCGCAGGGTCCAGGGAAG 62.785 72.222 0.30 0.00 0.00 3.46
3237 5938 4.101448 CGCAGGGTCCAGGGAAGG 62.101 72.222 0.00 0.00 0.00 3.46
3238 5939 3.732849 GCAGGGTCCAGGGAAGGG 61.733 72.222 0.00 0.00 0.00 3.95
3239 5940 2.204151 CAGGGTCCAGGGAAGGGT 60.204 66.667 0.00 0.00 0.00 4.34
3240 5941 2.125225 AGGGTCCAGGGAAGGGTC 59.875 66.667 0.00 0.00 0.00 4.46
3241 5942 3.015753 GGGTCCAGGGAAGGGTCC 61.016 72.222 0.00 0.00 44.10 4.46
3242 5943 3.400054 GGTCCAGGGAAGGGTCCG 61.400 72.222 0.00 0.00 46.04 4.79
3243 5944 2.284405 GTCCAGGGAAGGGTCCGA 60.284 66.667 0.00 0.00 46.04 4.55
3244 5945 2.284405 TCCAGGGAAGGGTCCGAC 60.284 66.667 0.00 0.00 46.04 4.79
3245 5946 3.400054 CCAGGGAAGGGTCCGACC 61.400 72.222 9.30 9.30 46.04 4.79
3246 5947 2.606519 CAGGGAAGGGTCCGACCA 60.607 66.667 19.43 0.00 46.04 4.02
3247 5948 1.995626 CAGGGAAGGGTCCGACCAT 60.996 63.158 19.43 9.67 46.04 3.55
3248 5949 1.229853 AGGGAAGGGTCCGACCATT 60.230 57.895 17.19 17.19 46.04 3.16
3249 5950 0.845102 AGGGAAGGGTCCGACCATTT 60.845 55.000 18.14 11.86 43.04 2.32
3250 5951 0.039180 GGGAAGGGTCCGACCATTTT 59.961 55.000 18.14 9.49 43.04 1.82
3251 5952 1.173913 GGAAGGGTCCGACCATTTTG 58.826 55.000 18.14 0.00 43.04 2.44
3252 5953 1.173913 GAAGGGTCCGACCATTTTGG 58.826 55.000 18.14 0.00 43.04 3.28
3253 5954 0.251608 AAGGGTCCGACCATTTTGGG 60.252 55.000 19.43 0.00 39.55 4.12
3254 5955 1.076014 GGGTCCGACCATTTTGGGT 59.924 57.895 19.43 0.00 43.37 4.51
3265 5966 4.700700 ACCATTTTGGGTCTATAGTACGC 58.299 43.478 0.00 6.13 43.37 4.42
3266 5967 4.162698 ACCATTTTGGGTCTATAGTACGCA 59.837 41.667 13.98 13.98 43.37 5.24
3267 5968 4.750098 CCATTTTGGGTCTATAGTACGCAG 59.250 45.833 16.00 9.06 40.36 5.18
3268 5969 5.684030 CCATTTTGGGTCTATAGTACGCAGT 60.684 44.000 16.00 8.67 40.36 4.40
3269 5970 4.644103 TTTGGGTCTATAGTACGCAGTC 57.356 45.455 16.00 0.00 43.93 3.51
3270 5971 3.572632 TGGGTCTATAGTACGCAGTCT 57.427 47.619 13.98 0.00 43.93 3.24
3271 5972 3.894759 TGGGTCTATAGTACGCAGTCTT 58.105 45.455 13.98 0.00 43.93 3.01
3272 5973 4.275810 TGGGTCTATAGTACGCAGTCTTT 58.724 43.478 13.98 0.00 43.93 2.52
3273 5974 4.337555 TGGGTCTATAGTACGCAGTCTTTC 59.662 45.833 13.98 0.00 43.93 2.62
3274 5975 4.261530 GGGTCTATAGTACGCAGTCTTTCC 60.262 50.000 0.00 0.00 43.93 3.13
3275 5976 4.261530 GGTCTATAGTACGCAGTCTTTCCC 60.262 50.000 0.00 0.00 43.93 3.97
3276 5977 4.579753 GTCTATAGTACGCAGTCTTTCCCT 59.420 45.833 0.00 0.00 43.93 4.20
3277 5978 5.762218 GTCTATAGTACGCAGTCTTTCCCTA 59.238 44.000 0.00 0.00 43.93 3.53
3278 5979 4.915158 ATAGTACGCAGTCTTTCCCTAC 57.085 45.455 0.00 0.00 43.93 3.18
3279 5980 2.522185 AGTACGCAGTCTTTCCCTACA 58.478 47.619 0.00 0.00 43.93 2.74
3280 5981 3.097614 AGTACGCAGTCTTTCCCTACAT 58.902 45.455 0.00 0.00 43.93 2.29
3281 5982 3.514309 AGTACGCAGTCTTTCCCTACATT 59.486 43.478 0.00 0.00 43.93 2.71
3282 5983 3.418684 ACGCAGTCTTTCCCTACATTT 57.581 42.857 0.00 0.00 29.74 2.32
3283 5984 3.335579 ACGCAGTCTTTCCCTACATTTC 58.664 45.455 0.00 0.00 29.74 2.17
3284 5985 3.008049 ACGCAGTCTTTCCCTACATTTCT 59.992 43.478 0.00 0.00 29.74 2.52
3285 5986 3.372206 CGCAGTCTTTCCCTACATTTCTG 59.628 47.826 0.00 0.00 0.00 3.02
3286 5987 4.327680 GCAGTCTTTCCCTACATTTCTGT 58.672 43.478 0.00 0.00 39.49 3.41
3287 5988 5.488341 GCAGTCTTTCCCTACATTTCTGTA 58.512 41.667 0.00 0.00 36.79 2.74
3288 5989 5.938125 GCAGTCTTTCCCTACATTTCTGTAA 59.062 40.000 0.00 0.00 37.41 2.41
3289 5990 6.092807 GCAGTCTTTCCCTACATTTCTGTAAG 59.907 42.308 0.00 0.00 37.41 2.34
3290 5991 7.386851 CAGTCTTTCCCTACATTTCTGTAAGA 58.613 38.462 0.00 0.00 44.68 2.10
3302 6003 3.685139 TCTGTAAGAGGCTGTTTCCAG 57.315 47.619 0.90 9.48 38.67 3.86
3303 6004 2.303022 TCTGTAAGAGGCTGTTTCCAGG 59.697 50.000 17.71 5.83 38.67 4.45
3304 6005 2.303022 CTGTAAGAGGCTGTTTCCAGGA 59.697 50.000 0.90 0.00 35.89 3.86
3305 6006 2.038557 TGTAAGAGGCTGTTTCCAGGAC 59.961 50.000 0.90 0.00 39.22 3.85
3306 6007 1.439543 AAGAGGCTGTTTCCAGGACT 58.560 50.000 0.00 0.00 39.22 3.85
3307 6008 1.439543 AGAGGCTGTTTCCAGGACTT 58.560 50.000 0.00 0.00 39.22 3.01
3308 6009 1.072965 AGAGGCTGTTTCCAGGACTTG 59.927 52.381 0.00 0.00 39.22 3.16
3309 6010 1.072331 GAGGCTGTTTCCAGGACTTGA 59.928 52.381 0.00 0.00 39.22 3.02
3310 6011 1.494721 AGGCTGTTTCCAGGACTTGAA 59.505 47.619 0.00 0.00 39.22 2.69
3311 6012 1.609072 GGCTGTTTCCAGGACTTGAAC 59.391 52.381 0.00 0.00 39.22 3.18
3312 6013 1.609072 GCTGTTTCCAGGACTTGAACC 59.391 52.381 0.00 0.00 39.22 3.62
3313 6014 2.230660 CTGTTTCCAGGACTTGAACCC 58.769 52.381 0.00 0.00 34.90 4.11
3314 6015 1.566703 TGTTTCCAGGACTTGAACCCA 59.433 47.619 0.00 0.00 0.00 4.51
3315 6016 2.176798 TGTTTCCAGGACTTGAACCCAT 59.823 45.455 0.00 0.00 0.00 4.00
3316 6017 2.558359 GTTTCCAGGACTTGAACCCATG 59.442 50.000 0.00 0.00 0.00 3.66
3317 6018 1.741028 TCCAGGACTTGAACCCATGA 58.259 50.000 0.00 0.00 0.00 3.07
3318 6019 1.351017 TCCAGGACTTGAACCCATGAC 59.649 52.381 0.00 0.00 0.00 3.06
3319 6020 1.614317 CCAGGACTTGAACCCATGACC 60.614 57.143 0.00 0.00 34.29 4.02
3320 6021 1.352352 CAGGACTTGAACCCATGACCT 59.648 52.381 0.00 0.00 40.96 3.85
3321 6022 1.630878 AGGACTTGAACCCATGACCTC 59.369 52.381 0.00 0.00 37.82 3.85
3322 6023 1.351017 GGACTTGAACCCATGACCTCA 59.649 52.381 0.00 0.00 32.45 3.86
3323 6024 2.025887 GGACTTGAACCCATGACCTCAT 60.026 50.000 0.00 0.00 36.96 2.90
3335 6036 2.154139 ACCTCATGGTCACAAGGCA 58.846 52.632 0.00 0.00 44.78 4.75
3336 6037 0.037303 ACCTCATGGTCACAAGGCAG 59.963 55.000 0.00 0.00 44.78 4.85
3337 6038 1.310933 CCTCATGGTCACAAGGCAGC 61.311 60.000 0.00 0.00 0.00 5.25
3338 6039 0.607217 CTCATGGTCACAAGGCAGCA 60.607 55.000 0.00 0.00 0.00 4.41
3339 6040 0.607217 TCATGGTCACAAGGCAGCAG 60.607 55.000 0.00 0.00 0.00 4.24
3340 6041 1.975407 ATGGTCACAAGGCAGCAGC 60.975 57.895 0.00 0.00 41.10 5.25
3341 6042 2.282040 GGTCACAAGGCAGCAGCT 60.282 61.111 0.00 0.00 41.70 4.24
3342 6043 1.900498 GGTCACAAGGCAGCAGCTT 60.900 57.895 0.00 0.00 41.70 3.74
3343 6044 1.458639 GGTCACAAGGCAGCAGCTTT 61.459 55.000 0.00 0.00 41.17 3.51
3344 6045 1.238439 GTCACAAGGCAGCAGCTTTA 58.762 50.000 0.00 0.00 38.07 1.85
3345 6046 1.068954 GTCACAAGGCAGCAGCTTTAC 60.069 52.381 0.00 0.00 38.07 2.01
3346 6047 0.242017 CACAAGGCAGCAGCTTTACC 59.758 55.000 0.00 0.00 38.07 2.85
3347 6048 0.178992 ACAAGGCAGCAGCTTTACCA 60.179 50.000 0.00 0.00 38.07 3.25
3348 6049 0.242017 CAAGGCAGCAGCTTTACCAC 59.758 55.000 0.00 0.00 38.07 4.16
3349 6050 0.111253 AAGGCAGCAGCTTTACCACT 59.889 50.000 0.00 0.00 38.40 4.00
3350 6051 0.607489 AGGCAGCAGCTTTACCACTG 60.607 55.000 0.00 0.00 41.70 3.66
3355 6056 2.912986 CAGCTTTACCACTGCGTCA 58.087 52.632 0.00 0.00 0.00 4.35
3356 6057 1.225855 CAGCTTTACCACTGCGTCAA 58.774 50.000 0.00 0.00 0.00 3.18
3357 6058 1.195448 CAGCTTTACCACTGCGTCAAG 59.805 52.381 0.00 0.00 0.00 3.02
3358 6059 0.517316 GCTTTACCACTGCGTCAAGG 59.483 55.000 0.00 0.00 0.00 3.61
3359 6060 0.517316 CTTTACCACTGCGTCAAGGC 59.483 55.000 0.00 0.00 0.00 4.35
3360 6061 0.107831 TTTACCACTGCGTCAAGGCT 59.892 50.000 0.00 0.00 0.00 4.58
3361 6062 0.320421 TTACCACTGCGTCAAGGCTC 60.320 55.000 0.00 0.00 0.00 4.70
3362 6063 1.185618 TACCACTGCGTCAAGGCTCT 61.186 55.000 0.00 0.00 0.00 4.09
3363 6064 1.185618 ACCACTGCGTCAAGGCTCTA 61.186 55.000 0.00 0.00 0.00 2.43
3364 6065 0.737715 CCACTGCGTCAAGGCTCTAC 60.738 60.000 0.00 0.00 0.00 2.59
3365 6066 0.244994 CACTGCGTCAAGGCTCTACT 59.755 55.000 0.00 0.00 0.00 2.57
3366 6067 1.472878 CACTGCGTCAAGGCTCTACTA 59.527 52.381 0.00 0.00 0.00 1.82
3367 6068 1.746220 ACTGCGTCAAGGCTCTACTAG 59.254 52.381 0.00 0.00 0.00 2.57
3368 6069 1.746220 CTGCGTCAAGGCTCTACTAGT 59.254 52.381 0.00 0.00 0.00 2.57
3369 6070 2.943690 CTGCGTCAAGGCTCTACTAGTA 59.056 50.000 1.89 1.89 0.00 1.82
3370 6071 3.349927 TGCGTCAAGGCTCTACTAGTAA 58.650 45.455 3.76 0.00 0.00 2.24
3371 6072 3.952323 TGCGTCAAGGCTCTACTAGTAAT 59.048 43.478 3.76 0.00 0.00 1.89
3372 6073 4.202020 TGCGTCAAGGCTCTACTAGTAATG 60.202 45.833 3.76 1.11 0.00 1.90
3373 6074 4.291783 CGTCAAGGCTCTACTAGTAATGC 58.708 47.826 14.79 14.79 0.00 3.56
3374 6075 4.036971 CGTCAAGGCTCTACTAGTAATGCT 59.963 45.833 19.61 8.68 0.00 3.79
3375 6076 5.450688 CGTCAAGGCTCTACTAGTAATGCTT 60.451 44.000 19.61 13.24 0.00 3.91
3485 7178 9.376075 ACAACTAAATGACTCAATCTATCAGTG 57.624 33.333 0.00 0.00 0.00 3.66
3487 7180 8.311395 ACTAAATGACTCAATCTATCAGTGGA 57.689 34.615 0.00 0.00 0.00 4.02
3488 7181 8.420222 ACTAAATGACTCAATCTATCAGTGGAG 58.580 37.037 0.00 0.00 0.00 3.86
3490 7183 4.285020 TGACTCAATCTATCAGTGGAGCT 58.715 43.478 0.00 0.00 0.00 4.09
3492 7185 3.640967 ACTCAATCTATCAGTGGAGCTCC 59.359 47.826 26.78 26.78 0.00 4.70
3493 7186 2.625314 TCAATCTATCAGTGGAGCTCCG 59.375 50.000 27.43 13.83 39.43 4.63
3494 7187 1.626686 ATCTATCAGTGGAGCTCCGG 58.373 55.000 27.43 18.90 39.43 5.14
3495 7188 0.259065 TCTATCAGTGGAGCTCCGGT 59.741 55.000 27.43 14.50 39.43 5.28
3496 7189 1.493446 TCTATCAGTGGAGCTCCGGTA 59.507 52.381 27.43 13.00 39.43 4.02
3539 7408 5.009010 CGCATGGGAAAGCTACTTCATTTAT 59.991 40.000 3.11 0.00 0.00 1.40
3540 7409 6.204688 CGCATGGGAAAGCTACTTCATTTATA 59.795 38.462 3.11 0.00 0.00 0.98
3592 7461 5.717078 ATTTCACACAACAGCAAGATCAT 57.283 34.783 0.00 0.00 0.00 2.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
90 570 2.048603 GCTCACCATTGGGCTCACC 61.049 63.158 7.78 0.00 46.90 4.02
96 576 3.944250 AAGCCGGCTCACCATTGGG 62.944 63.158 32.93 0.00 41.29 4.12
113 593 2.047655 CTTGTAGCGGCGGGACAA 60.048 61.111 9.78 14.44 0.00 3.18
147 627 2.156310 GGTACTTTCGTTGGCGTGTTAG 59.844 50.000 0.00 0.00 39.49 2.34
149 629 0.939419 GGTACTTTCGTTGGCGTGTT 59.061 50.000 0.00 0.00 39.49 3.32
150 630 0.881600 GGGTACTTTCGTTGGCGTGT 60.882 55.000 0.00 0.00 39.49 4.49
152 632 0.968405 TAGGGTACTTTCGTTGGCGT 59.032 50.000 0.00 0.00 39.49 5.68
154 634 3.558829 GCTTATAGGGTACTTTCGTTGGC 59.441 47.826 0.00 0.00 0.00 4.52
155 635 5.019785 AGCTTATAGGGTACTTTCGTTGG 57.980 43.478 0.00 0.00 0.00 3.77
157 637 7.174107 TGTTAGCTTATAGGGTACTTTCGTT 57.826 36.000 0.00 0.00 0.00 3.85
158 638 6.780457 TGTTAGCTTATAGGGTACTTTCGT 57.220 37.500 0.00 0.00 0.00 3.85
162 642 8.554011 TGGAAAATGTTAGCTTATAGGGTACTT 58.446 33.333 0.00 0.00 0.00 2.24
163 643 8.097791 TGGAAAATGTTAGCTTATAGGGTACT 57.902 34.615 0.00 0.00 0.00 2.73
164 644 8.919777 ATGGAAAATGTTAGCTTATAGGGTAC 57.080 34.615 0.00 0.00 0.00 3.34
173 653 7.951591 ACAACTGTTATGGAAAATGTTAGCTT 58.048 30.769 0.00 0.00 0.00 3.74
174 654 7.524717 ACAACTGTTATGGAAAATGTTAGCT 57.475 32.000 0.00 0.00 0.00 3.32
175 655 9.124807 GTAACAACTGTTATGGAAAATGTTAGC 57.875 33.333 5.64 0.00 41.85 3.09
179 659 9.528018 CAAAGTAACAACTGTTATGGAAAATGT 57.472 29.630 5.64 0.00 41.85 2.71
180 660 9.528018 ACAAAGTAACAACTGTTATGGAAAATG 57.472 29.630 5.64 2.73 41.85 2.32
184 664 9.344772 ACATACAAAGTAACAACTGTTATGGAA 57.655 29.630 5.64 0.00 41.85 3.53
185 665 8.779303 CACATACAAAGTAACAACTGTTATGGA 58.221 33.333 5.64 0.00 41.85 3.41
186 666 8.779303 TCACATACAAAGTAACAACTGTTATGG 58.221 33.333 5.64 0.15 41.85 2.74
188 668 8.780249 GGTCACATACAAAGTAACAACTGTTAT 58.220 33.333 5.64 0.00 41.85 1.89
189 669 7.227116 GGGTCACATACAAAGTAACAACTGTTA 59.773 37.037 0.00 0.00 39.31 2.41
191 671 5.529800 GGGTCACATACAAAGTAACAACTGT 59.470 40.000 0.00 0.00 0.00 3.55
192 672 5.529430 TGGGTCACATACAAAGTAACAACTG 59.471 40.000 0.00 0.00 0.00 3.16
193 673 5.686753 TGGGTCACATACAAAGTAACAACT 58.313 37.500 0.00 0.00 0.00 3.16
194 674 6.183360 TGTTGGGTCACATACAAAGTAACAAC 60.183 38.462 0.00 0.00 35.27 3.32
195 675 5.886474 TGTTGGGTCACATACAAAGTAACAA 59.114 36.000 0.00 0.00 0.00 2.83
196 676 5.437946 TGTTGGGTCACATACAAAGTAACA 58.562 37.500 0.00 0.00 0.00 2.41
197 677 5.529800 ACTGTTGGGTCACATACAAAGTAAC 59.470 40.000 0.00 0.00 0.00 2.50
198 678 5.686753 ACTGTTGGGTCACATACAAAGTAA 58.313 37.500 0.00 0.00 0.00 2.24
199 679 5.071250 AGACTGTTGGGTCACATACAAAGTA 59.929 40.000 0.00 0.00 38.57 2.24
200 680 4.134563 GACTGTTGGGTCACATACAAAGT 58.865 43.478 0.00 0.00 36.35 2.66
202 682 4.141597 TGAGACTGTTGGGTCACATACAAA 60.142 41.667 0.00 0.00 38.57 2.83
203 683 3.389656 TGAGACTGTTGGGTCACATACAA 59.610 43.478 0.00 0.00 38.57 2.41
205 685 3.678056 TGAGACTGTTGGGTCACATAC 57.322 47.619 0.00 0.00 38.57 2.39
206 686 4.405680 CCTATGAGACTGTTGGGTCACATA 59.594 45.833 11.80 11.80 42.51 2.29
207 687 3.198635 CCTATGAGACTGTTGGGTCACAT 59.801 47.826 10.98 10.98 44.86 3.21
208 688 2.567169 CCTATGAGACTGTTGGGTCACA 59.433 50.000 0.00 0.00 40.03 3.58
209 689 2.567615 ACCTATGAGACTGTTGGGTCAC 59.432 50.000 0.00 0.00 38.57 3.67
210 690 2.902608 ACCTATGAGACTGTTGGGTCA 58.097 47.619 0.00 0.00 38.57 4.02
211 691 3.983044 AACCTATGAGACTGTTGGGTC 57.017 47.619 0.00 0.00 36.56 4.46
212 692 5.030147 TGATAACCTATGAGACTGTTGGGT 58.970 41.667 0.00 0.00 0.00 4.51
213 693 5.614324 TGATAACCTATGAGACTGTTGGG 57.386 43.478 0.00 0.00 0.00 4.12
214 694 8.511604 AAAATGATAACCTATGAGACTGTTGG 57.488 34.615 0.00 0.00 0.00 3.77
215 695 9.994432 GAAAAATGATAACCTATGAGACTGTTG 57.006 33.333 0.00 0.00 0.00 3.33
216 696 9.739276 TGAAAAATGATAACCTATGAGACTGTT 57.261 29.630 0.00 0.00 0.00 3.16
217 697 9.911788 ATGAAAAATGATAACCTATGAGACTGT 57.088 29.630 0.00 0.00 0.00 3.55
308 1035 0.390340 CGTAGAGCCTGCTTGCAAGA 60.390 55.000 30.39 13.73 0.00 3.02
333 1060 4.024143 GCGCACGTGGCATGTCAA 62.024 61.111 18.88 0.00 45.17 3.18
352 1079 1.796459 GCACCGTATTTCTGTTCACGT 59.204 47.619 0.00 0.00 32.66 4.49
353 1080 1.127951 GGCACCGTATTTCTGTTCACG 59.872 52.381 0.00 0.00 0.00 4.35
354 1081 2.423577 AGGCACCGTATTTCTGTTCAC 58.576 47.619 0.00 0.00 0.00 3.18
355 1082 2.851263 AGGCACCGTATTTCTGTTCA 57.149 45.000 0.00 0.00 0.00 3.18
427 1155 4.634012 TTACATGGCCTGTAACTGACTT 57.366 40.909 18.27 0.00 43.72 3.01
439 1167 4.334203 TGTAATGTCGATGTTTACATGGCC 59.666 41.667 0.00 0.00 36.47 5.36
522 1251 5.574970 AAGAGGTGATCTGTCTCCTTTTT 57.425 39.130 0.00 0.00 45.81 1.94
578 1307 5.810080 ACTTTAGAGGTCTGTAAAGCTGT 57.190 39.130 20.51 6.43 45.08 4.40
588 1317 6.420913 TCAAGCAAACTACTTTAGAGGTCT 57.579 37.500 0.00 0.00 0.00 3.85
646 1458 5.650543 ACAGAAAGGTAGTGCAAAAACTTG 58.349 37.500 0.85 0.00 0.00 3.16
662 1474 6.017109 AGCTTGTGGTTGTACAATACAGAAAG 60.017 38.462 20.64 20.54 39.60 2.62
726 1692 5.763204 GTCTTCTAGGTACATCAGAGAGGAG 59.237 48.000 0.00 0.00 0.00 3.69
760 2094 5.753716 TCTCTACCTGGTAGTACTCCTTTC 58.246 45.833 28.21 0.00 37.41 2.62
768 2102 2.158842 GCCGTCTCTCTACCTGGTAGTA 60.159 54.545 28.21 18.49 37.41 1.82
769 2103 1.408544 GCCGTCTCTCTACCTGGTAGT 60.409 57.143 28.21 0.00 37.41 2.73
770 2104 1.310904 GCCGTCTCTCTACCTGGTAG 58.689 60.000 24.87 24.87 37.47 3.18
786 2123 3.759828 GTCGTTTGGTCGTCGCCG 61.760 66.667 0.00 0.00 0.00 6.46
811 2148 1.203523 AGCTCCACTTAGTCAGCTTCG 59.796 52.381 9.01 0.00 39.22 3.79
822 2160 1.301244 CTGCACGACAGCTCCACTT 60.301 57.895 0.00 0.00 40.19 3.16
824 2162 0.173481 TATCTGCACGACAGCTCCAC 59.827 55.000 5.50 0.00 46.76 4.02
869 2211 2.091499 TGGAAGAAGGAGGATAGCCGTA 60.091 50.000 0.00 0.00 39.96 4.02
903 2245 3.563808 CAGGGCAAATTTATAGCAGCGTA 59.436 43.478 0.00 0.00 0.00 4.42
924 2268 2.875188 AACAAGTGTGTTTCGGCCA 58.125 47.368 2.24 0.00 46.01 5.36
946 2290 1.001974 ACGAGCTAGGTTGTTGCATGA 59.998 47.619 9.10 0.00 0.00 3.07
962 2306 2.048597 TGGTGGCACGCTTACGAG 60.049 61.111 12.17 0.00 43.93 4.18
963 2307 2.356553 GTGGTGGCACGCTTACGA 60.357 61.111 12.17 0.00 43.93 3.43
965 2309 2.613506 GGTGTGGTGGCACGCTTAC 61.614 63.158 12.17 8.56 40.08 2.34
993 2391 2.668279 CGCCACAAGCTCCATTGTTTAC 60.668 50.000 0.00 0.00 41.41 2.01
1075 2473 3.324108 TGGCGGGGTAGGGTGAAC 61.324 66.667 0.00 0.00 0.00 3.18
1976 4185 0.607217 TCTTACCAGCTCCGACACGA 60.607 55.000 0.00 0.00 0.00 4.35
2533 5044 4.328983 CACTAATTTGCGAGTGGAATACGT 59.671 41.667 0.00 0.00 39.55 3.57
2721 5422 8.893727 CCATCGAAATTGTACTTAAAAGATCCT 58.106 33.333 0.00 0.00 0.00 3.24
2722 5423 8.674607 ACCATCGAAATTGTACTTAAAAGATCC 58.325 33.333 0.00 0.00 0.00 3.36
2739 5440 7.908827 TGTACTTAAAAGCATACCATCGAAA 57.091 32.000 0.00 0.00 0.00 3.46
2804 5505 7.391620 TCTTTGTCCGGACTTGAATTACTTAT 58.608 34.615 33.39 0.00 0.00 1.73
2814 5515 4.392138 GGTTCTAATCTTTGTCCGGACTTG 59.608 45.833 33.39 22.30 0.00 3.16
2817 5518 3.055312 AGGGTTCTAATCTTTGTCCGGAC 60.055 47.826 28.17 28.17 0.00 4.79
2829 5530 3.501568 GGGTTGGGTTTGAGGGTTCTAAT 60.502 47.826 0.00 0.00 0.00 1.73
2830 5531 2.158430 GGGTTGGGTTTGAGGGTTCTAA 60.158 50.000 0.00 0.00 0.00 2.10
2831 5532 1.426215 GGGTTGGGTTTGAGGGTTCTA 59.574 52.381 0.00 0.00 0.00 2.10
2832 5533 0.187606 GGGTTGGGTTTGAGGGTTCT 59.812 55.000 0.00 0.00 0.00 3.01
2833 5534 0.187606 AGGGTTGGGTTTGAGGGTTC 59.812 55.000 0.00 0.00 0.00 3.62
2834 5535 0.639943 AAGGGTTGGGTTTGAGGGTT 59.360 50.000 0.00 0.00 0.00 4.11
2835 5536 1.536644 TAAGGGTTGGGTTTGAGGGT 58.463 50.000 0.00 0.00 0.00 4.34
2836 5537 2.919772 ATAAGGGTTGGGTTTGAGGG 57.080 50.000 0.00 0.00 0.00 4.30
2837 5538 3.692593 CGTTATAAGGGTTGGGTTTGAGG 59.307 47.826 0.00 0.00 0.00 3.86
2838 5539 3.692593 CCGTTATAAGGGTTGGGTTTGAG 59.307 47.826 14.83 0.00 0.00 3.02
2839 5540 3.330110 TCCGTTATAAGGGTTGGGTTTGA 59.670 43.478 20.71 0.00 35.51 2.69
2840 5541 3.688235 TCCGTTATAAGGGTTGGGTTTG 58.312 45.455 20.71 0.00 35.51 2.93
2841 5542 4.385478 TTCCGTTATAAGGGTTGGGTTT 57.615 40.909 20.71 0.00 35.51 3.27
2842 5543 4.596354 ATTCCGTTATAAGGGTTGGGTT 57.404 40.909 20.71 2.17 35.51 4.11
2843 5544 5.917545 ATATTCCGTTATAAGGGTTGGGT 57.082 39.130 20.71 8.63 35.51 4.51
2844 5545 5.708697 GGAATATTCCGTTATAAGGGTTGGG 59.291 44.000 18.61 1.31 37.65 4.12
2845 5546 6.812879 GGAATATTCCGTTATAAGGGTTGG 57.187 41.667 18.61 3.35 37.65 3.77
2860 5561 5.291128 ACAACGTCGTTCATGAGGAATATTC 59.709 40.000 7.86 6.93 37.93 1.75
2861 5562 5.175859 ACAACGTCGTTCATGAGGAATATT 58.824 37.500 7.86 0.00 37.93 1.28
2862 5563 4.755411 ACAACGTCGTTCATGAGGAATAT 58.245 39.130 7.86 0.00 37.93 1.28
2863 5564 4.171005 GACAACGTCGTTCATGAGGAATA 58.829 43.478 7.86 0.00 37.93 1.75
2864 5565 2.993899 GACAACGTCGTTCATGAGGAAT 59.006 45.455 7.86 0.00 37.93 3.01
2865 5566 2.400399 GACAACGTCGTTCATGAGGAA 58.600 47.619 7.86 0.00 0.00 3.36
2866 5567 2.060326 GACAACGTCGTTCATGAGGA 57.940 50.000 7.86 0.00 0.00 3.71
2918 5619 4.208686 CTAGTCGCCCCTGTCGCC 62.209 72.222 0.00 0.00 0.00 5.54
2919 5620 4.874977 GCTAGTCGCCCCTGTCGC 62.875 72.222 0.00 0.00 0.00 5.19
2920 5621 3.417275 CTGCTAGTCGCCCCTGTCG 62.417 68.421 0.00 0.00 38.05 4.35
2921 5622 2.496817 CTGCTAGTCGCCCCTGTC 59.503 66.667 0.00 0.00 38.05 3.51
2922 5623 3.775654 GCTGCTAGTCGCCCCTGT 61.776 66.667 0.00 0.00 38.05 4.00
2923 5624 4.880537 CGCTGCTAGTCGCCCCTG 62.881 72.222 0.00 0.00 38.05 4.45
2959 5660 2.798445 AAAATCCTCCCAACCCCCGC 62.798 60.000 0.00 0.00 0.00 6.13
2960 5661 0.252057 AAAAATCCTCCCAACCCCCG 60.252 55.000 0.00 0.00 0.00 5.73
2961 5662 3.807309 AAAAATCCTCCCAACCCCC 57.193 52.632 0.00 0.00 0.00 5.40
2977 5678 2.157305 TACTCGCGCGGGAGGAAAAA 62.157 55.000 43.26 26.19 38.39 1.94
2978 5679 1.952102 ATACTCGCGCGGGAGGAAAA 61.952 55.000 43.26 30.03 38.39 2.29
2979 5680 1.102809 TATACTCGCGCGGGAGGAAA 61.103 55.000 43.26 32.07 38.39 3.13
2980 5681 1.102809 TTATACTCGCGCGGGAGGAA 61.103 55.000 43.26 34.13 38.39 3.36
2981 5682 1.526686 TTATACTCGCGCGGGAGGA 60.527 57.895 43.26 40.12 38.39 3.71
2982 5683 1.371389 GTTATACTCGCGCGGGAGG 60.371 63.158 43.26 29.96 38.39 4.30
2983 5684 1.371389 GGTTATACTCGCGCGGGAG 60.371 63.158 40.95 40.95 39.97 4.30
2984 5685 2.723746 GGTTATACTCGCGCGGGA 59.276 61.111 39.76 25.06 0.00 5.14
2985 5686 2.728383 CGGTTATACTCGCGCGGG 60.728 66.667 31.23 31.23 0.00 6.13
2986 5687 3.392440 GCGGTTATACTCGCGCGG 61.392 66.667 31.69 22.52 42.48 6.46
2991 5692 2.800544 CCTCATTTGGCGGTTATACTCG 59.199 50.000 0.00 0.00 0.00 4.18
2992 5693 3.139077 CCCTCATTTGGCGGTTATACTC 58.861 50.000 0.00 0.00 0.00 2.59
2993 5694 2.508300 ACCCTCATTTGGCGGTTATACT 59.492 45.455 0.00 0.00 0.00 2.12
2994 5695 2.927028 ACCCTCATTTGGCGGTTATAC 58.073 47.619 0.00 0.00 0.00 1.47
2995 5696 3.283751 CAACCCTCATTTGGCGGTTATA 58.716 45.455 0.00 0.00 36.45 0.98
2996 5697 2.099405 CAACCCTCATTTGGCGGTTAT 58.901 47.619 0.00 0.00 36.45 1.89
2997 5698 1.540267 CAACCCTCATTTGGCGGTTA 58.460 50.000 0.00 0.00 36.45 2.85
2998 5699 1.184970 CCAACCCTCATTTGGCGGTT 61.185 55.000 0.00 0.00 37.31 4.44
2999 5700 1.606313 CCAACCCTCATTTGGCGGT 60.606 57.895 0.00 0.00 37.31 5.68
3000 5701 2.350458 CCCAACCCTCATTTGGCGG 61.350 63.158 0.00 0.00 42.06 6.13
3001 5702 2.350458 CCCCAACCCTCATTTGGCG 61.350 63.158 0.00 0.00 42.06 5.69
3002 5703 0.040499 TACCCCAACCCTCATTTGGC 59.960 55.000 0.00 0.00 42.06 4.52
3003 5704 1.341976 CCTACCCCAACCCTCATTTGG 60.342 57.143 0.00 0.00 42.90 3.28
3004 5705 1.357761 ACCTACCCCAACCCTCATTTG 59.642 52.381 0.00 0.00 0.00 2.32
3005 5706 1.768265 ACCTACCCCAACCCTCATTT 58.232 50.000 0.00 0.00 0.00 2.32
3006 5707 1.768265 AACCTACCCCAACCCTCATT 58.232 50.000 0.00 0.00 0.00 2.57
3007 5708 1.768265 AAACCTACCCCAACCCTCAT 58.232 50.000 0.00 0.00 0.00 2.90
3008 5709 1.146152 CAAAACCTACCCCAACCCTCA 59.854 52.381 0.00 0.00 0.00 3.86
3009 5710 1.919240 CAAAACCTACCCCAACCCTC 58.081 55.000 0.00 0.00 0.00 4.30
3010 5711 0.178944 GCAAAACCTACCCCAACCCT 60.179 55.000 0.00 0.00 0.00 4.34
3011 5712 0.178944 AGCAAAACCTACCCCAACCC 60.179 55.000 0.00 0.00 0.00 4.11
3012 5713 1.203013 AGAGCAAAACCTACCCCAACC 60.203 52.381 0.00 0.00 0.00 3.77
3013 5714 2.160205 GAGAGCAAAACCTACCCCAAC 58.840 52.381 0.00 0.00 0.00 3.77
3014 5715 1.074889 GGAGAGCAAAACCTACCCCAA 59.925 52.381 0.00 0.00 0.00 4.12
3015 5716 0.696501 GGAGAGCAAAACCTACCCCA 59.303 55.000 0.00 0.00 0.00 4.96
3016 5717 0.696501 TGGAGAGCAAAACCTACCCC 59.303 55.000 0.00 0.00 0.00 4.95
3017 5718 2.160205 GTTGGAGAGCAAAACCTACCC 58.840 52.381 0.00 0.00 0.00 3.69
3018 5719 2.160205 GGTTGGAGAGCAAAACCTACC 58.840 52.381 0.00 0.00 40.22 3.18
3019 5720 2.160205 GGGTTGGAGAGCAAAACCTAC 58.840 52.381 4.00 0.00 42.50 3.18
3020 5721 2.062636 AGGGTTGGAGAGCAAAACCTA 58.937 47.619 4.00 0.00 42.50 3.08
3021 5722 0.853530 AGGGTTGGAGAGCAAAACCT 59.146 50.000 4.00 0.00 42.50 3.50
3022 5723 1.704641 AAGGGTTGGAGAGCAAAACC 58.295 50.000 0.00 0.00 42.21 3.27
3023 5724 3.487372 AGTAAGGGTTGGAGAGCAAAAC 58.513 45.455 0.00 0.00 0.00 2.43
3024 5725 3.876309 AGTAAGGGTTGGAGAGCAAAA 57.124 42.857 0.00 0.00 0.00 2.44
3025 5726 3.876309 AAGTAAGGGTTGGAGAGCAAA 57.124 42.857 0.00 0.00 0.00 3.68
3026 5727 3.876309 AAAGTAAGGGTTGGAGAGCAA 57.124 42.857 0.00 0.00 0.00 3.91
3027 5728 3.876309 AAAAGTAAGGGTTGGAGAGCA 57.124 42.857 0.00 0.00 0.00 4.26
3028 5729 5.881777 CTTAAAAGTAAGGGTTGGAGAGC 57.118 43.478 0.00 0.00 34.21 4.09
3039 5740 7.625469 ACTCTCTCCCAATCCTTAAAAGTAAG 58.375 38.462 0.00 0.00 37.12 2.34
3040 5741 7.569599 ACTCTCTCCCAATCCTTAAAAGTAA 57.430 36.000 0.00 0.00 0.00 2.24
3041 5742 7.569599 AACTCTCTCCCAATCCTTAAAAGTA 57.430 36.000 0.00 0.00 0.00 2.24
3042 5743 6.455690 AACTCTCTCCCAATCCTTAAAAGT 57.544 37.500 0.00 0.00 0.00 2.66
3043 5744 6.942576 TCAAACTCTCTCCCAATCCTTAAAAG 59.057 38.462 0.00 0.00 0.00 2.27
3044 5745 6.848069 TCAAACTCTCTCCCAATCCTTAAAA 58.152 36.000 0.00 0.00 0.00 1.52
3045 5746 6.448369 TCAAACTCTCTCCCAATCCTTAAA 57.552 37.500 0.00 0.00 0.00 1.52
3046 5747 5.045578 CCTCAAACTCTCTCCCAATCCTTAA 60.046 44.000 0.00 0.00 0.00 1.85
3047 5748 4.471386 CCTCAAACTCTCTCCCAATCCTTA 59.529 45.833 0.00 0.00 0.00 2.69
3048 5749 3.265479 CCTCAAACTCTCTCCCAATCCTT 59.735 47.826 0.00 0.00 0.00 3.36
3049 5750 2.843113 CCTCAAACTCTCTCCCAATCCT 59.157 50.000 0.00 0.00 0.00 3.24
3050 5751 2.092699 CCCTCAAACTCTCTCCCAATCC 60.093 54.545 0.00 0.00 0.00 3.01
3051 5752 2.573915 ACCCTCAAACTCTCTCCCAATC 59.426 50.000 0.00 0.00 0.00 2.67
3052 5753 2.637165 ACCCTCAAACTCTCTCCCAAT 58.363 47.619 0.00 0.00 0.00 3.16
3053 5754 2.106511 CAACCCTCAAACTCTCTCCCAA 59.893 50.000 0.00 0.00 0.00 4.12
3054 5755 1.699634 CAACCCTCAAACTCTCTCCCA 59.300 52.381 0.00 0.00 0.00 4.37
3055 5756 1.003696 CCAACCCTCAAACTCTCTCCC 59.996 57.143 0.00 0.00 0.00 4.30
3056 5757 1.978580 TCCAACCCTCAAACTCTCTCC 59.021 52.381 0.00 0.00 0.00 3.71
3057 5758 2.289756 GGTCCAACCCTCAAACTCTCTC 60.290 54.545 0.00 0.00 30.04 3.20
3058 5759 1.700186 GGTCCAACCCTCAAACTCTCT 59.300 52.381 0.00 0.00 30.04 3.10
3059 5760 1.700186 AGGTCCAACCCTCAAACTCTC 59.300 52.381 0.00 0.00 39.75 3.20
3060 5761 1.821088 AGGTCCAACCCTCAAACTCT 58.179 50.000 0.00 0.00 39.75 3.24
3061 5762 2.658807 AAGGTCCAACCCTCAAACTC 57.341 50.000 0.00 0.00 39.75 3.01
3062 5763 4.529716 TTAAAGGTCCAACCCTCAAACT 57.470 40.909 0.00 0.00 39.75 2.66
3063 5764 5.601583 TTTTAAAGGTCCAACCCTCAAAC 57.398 39.130 0.00 0.00 39.75 2.93
3084 5785 6.183361 CCTTAACCCTCAAACCCTCAATTTTT 60.183 38.462 0.00 0.00 0.00 1.94
3085 5786 5.306937 CCTTAACCCTCAAACCCTCAATTTT 59.693 40.000 0.00 0.00 0.00 1.82
3086 5787 4.838423 CCTTAACCCTCAAACCCTCAATTT 59.162 41.667 0.00 0.00 0.00 1.82
3087 5788 4.416516 CCTTAACCCTCAAACCCTCAATT 58.583 43.478 0.00 0.00 0.00 2.32
3088 5789 3.245622 CCCTTAACCCTCAAACCCTCAAT 60.246 47.826 0.00 0.00 0.00 2.57
3089 5790 2.109304 CCCTTAACCCTCAAACCCTCAA 59.891 50.000 0.00 0.00 0.00 3.02
3090 5791 1.708551 CCCTTAACCCTCAAACCCTCA 59.291 52.381 0.00 0.00 0.00 3.86
3091 5792 1.005569 CCCCTTAACCCTCAAACCCTC 59.994 57.143 0.00 0.00 0.00 4.30
3092 5793 1.081481 CCCCTTAACCCTCAAACCCT 58.919 55.000 0.00 0.00 0.00 4.34
3093 5794 0.781920 ACCCCTTAACCCTCAAACCC 59.218 55.000 0.00 0.00 0.00 4.11
3094 5795 2.109480 AGAACCCCTTAACCCTCAAACC 59.891 50.000 0.00 0.00 0.00 3.27
3095 5796 3.520691 AGAACCCCTTAACCCTCAAAC 57.479 47.619 0.00 0.00 0.00 2.93
3096 5797 5.554350 AGATTAGAACCCCTTAACCCTCAAA 59.446 40.000 0.00 0.00 0.00 2.69
3097 5798 5.105853 AGATTAGAACCCCTTAACCCTCAA 58.894 41.667 0.00 0.00 0.00 3.02
3098 5799 4.706616 AGATTAGAACCCCTTAACCCTCA 58.293 43.478 0.00 0.00 0.00 3.86
3099 5800 5.221402 CGTAGATTAGAACCCCTTAACCCTC 60.221 48.000 0.00 0.00 0.00 4.30
3100 5801 4.652881 CGTAGATTAGAACCCCTTAACCCT 59.347 45.833 0.00 0.00 0.00 4.34
3101 5802 4.202295 CCGTAGATTAGAACCCCTTAACCC 60.202 50.000 0.00 0.00 0.00 4.11
3102 5803 4.741837 GCCGTAGATTAGAACCCCTTAACC 60.742 50.000 0.00 0.00 0.00 2.85
3103 5804 4.100653 AGCCGTAGATTAGAACCCCTTAAC 59.899 45.833 0.00 0.00 0.00 2.01
3104 5805 4.292643 AGCCGTAGATTAGAACCCCTTAA 58.707 43.478 0.00 0.00 0.00 1.85
3105 5806 3.919834 AGCCGTAGATTAGAACCCCTTA 58.080 45.455 0.00 0.00 0.00 2.69
3106 5807 2.760581 AGCCGTAGATTAGAACCCCTT 58.239 47.619 0.00 0.00 0.00 3.95
3107 5808 2.473576 AGCCGTAGATTAGAACCCCT 57.526 50.000 0.00 0.00 0.00 4.79
3108 5809 3.555527 AAAGCCGTAGATTAGAACCCC 57.444 47.619 0.00 0.00 0.00 4.95
3149 5850 8.593679 CCTCAAACCCCTAAAAATAACTGATTT 58.406 33.333 0.00 0.00 39.56 2.17
3150 5851 7.180229 CCCTCAAACCCCTAAAAATAACTGATT 59.820 37.037 0.00 0.00 0.00 2.57
3151 5852 6.667848 CCCTCAAACCCCTAAAAATAACTGAT 59.332 38.462 0.00 0.00 0.00 2.90
3152 5853 6.014012 CCCTCAAACCCCTAAAAATAACTGA 58.986 40.000 0.00 0.00 0.00 3.41
3153 5854 5.337250 GCCCTCAAACCCCTAAAAATAACTG 60.337 44.000 0.00 0.00 0.00 3.16
3154 5855 4.775780 GCCCTCAAACCCCTAAAAATAACT 59.224 41.667 0.00 0.00 0.00 2.24
3155 5856 4.775780 AGCCCTCAAACCCCTAAAAATAAC 59.224 41.667 0.00 0.00 0.00 1.89
3156 5857 5.018374 AGCCCTCAAACCCCTAAAAATAA 57.982 39.130 0.00 0.00 0.00 1.40
3157 5858 4.293901 AGAGCCCTCAAACCCCTAAAAATA 59.706 41.667 0.00 0.00 0.00 1.40
3158 5859 3.077543 AGAGCCCTCAAACCCCTAAAAAT 59.922 43.478 0.00 0.00 0.00 1.82
3159 5860 2.449345 AGAGCCCTCAAACCCCTAAAAA 59.551 45.455 0.00 0.00 0.00 1.94
3160 5861 2.070573 AGAGCCCTCAAACCCCTAAAA 58.929 47.619 0.00 0.00 0.00 1.52
3161 5862 1.755200 AGAGCCCTCAAACCCCTAAA 58.245 50.000 0.00 0.00 0.00 1.85
3162 5863 2.193993 GTAGAGCCCTCAAACCCCTAA 58.806 52.381 0.00 0.00 0.00 2.69
3163 5864 1.365028 AGTAGAGCCCTCAAACCCCTA 59.635 52.381 0.00 0.00 0.00 3.53
3164 5865 0.119358 AGTAGAGCCCTCAAACCCCT 59.881 55.000 0.00 0.00 0.00 4.79
3165 5866 1.875488 TAGTAGAGCCCTCAAACCCC 58.125 55.000 0.00 0.00 0.00 4.95
3166 5867 3.994931 TTTAGTAGAGCCCTCAAACCC 57.005 47.619 0.00 0.00 0.00 4.11
3186 5887 1.130777 ATGCACCAGGTTGCCTTTTT 58.869 45.000 10.46 0.00 42.25 1.94
3187 5888 0.393820 CATGCACCAGGTTGCCTTTT 59.606 50.000 10.46 0.00 42.25 2.27
3188 5889 0.760189 ACATGCACCAGGTTGCCTTT 60.760 50.000 10.46 0.00 42.25 3.11
3189 5890 0.112218 TACATGCACCAGGTTGCCTT 59.888 50.000 10.46 0.00 42.25 4.35
3190 5891 0.322816 CTACATGCACCAGGTTGCCT 60.323 55.000 10.46 0.15 42.25 4.75
3191 5892 1.937546 GCTACATGCACCAGGTTGCC 61.938 60.000 10.46 0.00 39.88 4.52
3192 5893 0.962356 AGCTACATGCACCAGGTTGC 60.962 55.000 8.03 8.03 44.17 4.17
3193 5894 1.089920 GAGCTACATGCACCAGGTTG 58.910 55.000 0.00 0.00 45.94 3.77
3194 5895 3.558674 GAGCTACATGCACCAGGTT 57.441 52.632 0.00 0.00 45.94 3.50
3219 5920 4.785453 CTTCCCTGGACCCTGCGC 62.785 72.222 0.00 0.00 0.00 6.09
3220 5921 4.101448 CCTTCCCTGGACCCTGCG 62.101 72.222 0.00 0.00 0.00 5.18
3221 5922 3.732849 CCCTTCCCTGGACCCTGC 61.733 72.222 0.00 0.00 0.00 4.85
3222 5923 2.204151 ACCCTTCCCTGGACCCTG 60.204 66.667 0.00 0.00 0.00 4.45
3223 5924 2.125225 GACCCTTCCCTGGACCCT 59.875 66.667 0.00 0.00 0.00 4.34
3224 5925 3.015753 GGACCCTTCCCTGGACCC 61.016 72.222 0.00 0.00 35.57 4.46
3225 5926 3.400054 CGGACCCTTCCCTGGACC 61.400 72.222 0.00 0.00 38.99 4.46
3226 5927 2.284405 TCGGACCCTTCCCTGGAC 60.284 66.667 0.00 0.00 38.99 4.02
3227 5928 2.284405 GTCGGACCCTTCCCTGGA 60.284 66.667 0.00 0.00 38.99 3.86
3228 5929 3.400054 GGTCGGACCCTTCCCTGG 61.400 72.222 16.55 0.00 38.99 4.45
3229 5930 1.562672 AATGGTCGGACCCTTCCCTG 61.563 60.000 23.81 0.00 38.99 4.45
3230 5931 0.845102 AAATGGTCGGACCCTTCCCT 60.845 55.000 23.81 3.58 38.99 4.20
3231 5932 0.039180 AAAATGGTCGGACCCTTCCC 59.961 55.000 23.81 0.00 38.99 3.97
3232 5933 1.173913 CAAAATGGTCGGACCCTTCC 58.826 55.000 23.81 0.00 37.50 3.46
3233 5934 1.173913 CCAAAATGGTCGGACCCTTC 58.826 55.000 23.81 0.00 37.50 3.46
3234 5935 0.251608 CCCAAAATGGTCGGACCCTT 60.252 55.000 23.81 17.44 37.50 3.95
3235 5936 1.382629 CCCAAAATGGTCGGACCCT 59.617 57.895 23.81 12.03 37.50 4.34
3236 5937 0.963856 GACCCAAAATGGTCGGACCC 60.964 60.000 23.81 7.15 44.98 4.46
3237 5938 2.563297 GACCCAAAATGGTCGGACC 58.437 57.895 20.36 20.36 44.98 4.46
3243 5944 4.162698 TGCGTACTATAGACCCAAAATGGT 59.837 41.667 6.78 0.00 42.79 3.55
3244 5945 4.699637 TGCGTACTATAGACCCAAAATGG 58.300 43.478 6.78 0.00 37.25 3.16
3245 5946 5.357257 ACTGCGTACTATAGACCCAAAATG 58.643 41.667 6.78 0.00 0.00 2.32
3246 5947 5.363005 AGACTGCGTACTATAGACCCAAAAT 59.637 40.000 6.78 0.00 0.00 1.82
3247 5948 4.708421 AGACTGCGTACTATAGACCCAAAA 59.292 41.667 6.78 0.00 0.00 2.44
3248 5949 4.275810 AGACTGCGTACTATAGACCCAAA 58.724 43.478 6.78 0.00 0.00 3.28
3249 5950 3.894759 AGACTGCGTACTATAGACCCAA 58.105 45.455 6.78 0.00 0.00 4.12
3250 5951 3.572632 AGACTGCGTACTATAGACCCA 57.427 47.619 6.78 0.00 0.00 4.51
3251 5952 4.261530 GGAAAGACTGCGTACTATAGACCC 60.262 50.000 6.78 0.00 0.00 4.46
3252 5953 4.261530 GGGAAAGACTGCGTACTATAGACC 60.262 50.000 6.78 0.00 0.00 3.85
3253 5954 4.579753 AGGGAAAGACTGCGTACTATAGAC 59.420 45.833 6.78 0.00 0.00 2.59
3254 5955 4.789807 AGGGAAAGACTGCGTACTATAGA 58.210 43.478 6.78 0.00 0.00 1.98
3255 5956 5.530171 TGTAGGGAAAGACTGCGTACTATAG 59.470 44.000 0.00 0.00 37.55 1.31
3256 5957 5.439721 TGTAGGGAAAGACTGCGTACTATA 58.560 41.667 0.00 0.00 37.55 1.31
3257 5958 4.275810 TGTAGGGAAAGACTGCGTACTAT 58.724 43.478 0.00 0.00 37.55 2.12
3258 5959 3.689347 TGTAGGGAAAGACTGCGTACTA 58.311 45.455 0.00 0.00 37.55 1.82
3259 5960 2.522185 TGTAGGGAAAGACTGCGTACT 58.478 47.619 0.00 0.00 37.55 2.73
3260 5961 3.521947 ATGTAGGGAAAGACTGCGTAC 57.478 47.619 0.00 0.00 37.28 3.67
3261 5962 4.222145 AGAAATGTAGGGAAAGACTGCGTA 59.778 41.667 0.00 0.00 0.00 4.42
3262 5963 3.008049 AGAAATGTAGGGAAAGACTGCGT 59.992 43.478 0.00 0.00 0.00 5.24
3263 5964 3.372206 CAGAAATGTAGGGAAAGACTGCG 59.628 47.826 0.00 0.00 0.00 5.18
3264 5965 4.327680 ACAGAAATGTAGGGAAAGACTGC 58.672 43.478 0.00 0.00 0.00 4.40
3265 5966 7.386851 TCTTACAGAAATGTAGGGAAAGACTG 58.613 38.462 0.00 0.00 0.00 3.51
3266 5967 7.310734 CCTCTTACAGAAATGTAGGGAAAGACT 60.311 40.741 0.00 0.00 0.00 3.24
3267 5968 6.819146 CCTCTTACAGAAATGTAGGGAAAGAC 59.181 42.308 0.00 0.00 0.00 3.01
3268 5969 6.576442 GCCTCTTACAGAAATGTAGGGAAAGA 60.576 42.308 0.00 0.00 0.00 2.52
3269 5970 5.586643 GCCTCTTACAGAAATGTAGGGAAAG 59.413 44.000 0.00 0.00 0.00 2.62
3270 5971 5.250774 AGCCTCTTACAGAAATGTAGGGAAA 59.749 40.000 0.00 0.00 0.00 3.13
3271 5972 4.783227 AGCCTCTTACAGAAATGTAGGGAA 59.217 41.667 0.00 0.00 0.00 3.97
3272 5973 4.162320 CAGCCTCTTACAGAAATGTAGGGA 59.838 45.833 0.00 0.00 0.00 4.20
3273 5974 4.080863 ACAGCCTCTTACAGAAATGTAGGG 60.081 45.833 0.00 0.66 0.00 3.53
3274 5975 5.091261 ACAGCCTCTTACAGAAATGTAGG 57.909 43.478 0.00 0.00 0.00 3.18
3275 5976 6.092807 GGAAACAGCCTCTTACAGAAATGTAG 59.907 42.308 0.00 0.00 0.00 2.74
3276 5977 5.938125 GGAAACAGCCTCTTACAGAAATGTA 59.062 40.000 0.00 0.00 0.00 2.29
3277 5978 4.762251 GGAAACAGCCTCTTACAGAAATGT 59.238 41.667 0.00 0.00 0.00 2.71
3278 5979 4.761739 TGGAAACAGCCTCTTACAGAAATG 59.238 41.667 0.00 0.00 35.01 2.32
3279 5980 4.985538 TGGAAACAGCCTCTTACAGAAAT 58.014 39.130 0.00 0.00 35.01 2.17
3280 5981 4.431416 TGGAAACAGCCTCTTACAGAAA 57.569 40.909 0.00 0.00 35.01 2.52
3294 5995 1.566703 TGGGTTCAAGTCCTGGAAACA 59.433 47.619 0.00 0.00 32.36 2.83
3295 5996 2.358322 TGGGTTCAAGTCCTGGAAAC 57.642 50.000 0.00 0.00 0.00 2.78
3296 5997 2.445145 TCATGGGTTCAAGTCCTGGAAA 59.555 45.455 0.00 0.00 0.00 3.13
3297 5998 2.061848 TCATGGGTTCAAGTCCTGGAA 58.938 47.619 0.00 0.00 0.00 3.53
3298 5999 1.351017 GTCATGGGTTCAAGTCCTGGA 59.649 52.381 0.00 0.00 0.00 3.86
3299 6000 1.614317 GGTCATGGGTTCAAGTCCTGG 60.614 57.143 0.00 0.00 0.00 4.45
3300 6001 1.352352 AGGTCATGGGTTCAAGTCCTG 59.648 52.381 0.00 0.00 0.00 3.86
3301 6002 1.630878 GAGGTCATGGGTTCAAGTCCT 59.369 52.381 0.00 0.00 0.00 3.85
3302 6003 1.351017 TGAGGTCATGGGTTCAAGTCC 59.649 52.381 0.00 0.00 0.00 3.85
3303 6004 2.859165 TGAGGTCATGGGTTCAAGTC 57.141 50.000 0.00 0.00 0.00 3.01
3318 6019 1.310933 GCTGCCTTGTGACCATGAGG 61.311 60.000 0.00 0.00 42.21 3.86
3319 6020 0.607217 TGCTGCCTTGTGACCATGAG 60.607 55.000 0.00 0.00 0.00 2.90
3320 6021 0.607217 CTGCTGCCTTGTGACCATGA 60.607 55.000 0.00 0.00 0.00 3.07
3321 6022 1.880894 CTGCTGCCTTGTGACCATG 59.119 57.895 0.00 0.00 0.00 3.66
3322 6023 1.975407 GCTGCTGCCTTGTGACCAT 60.975 57.895 3.85 0.00 0.00 3.55
3323 6024 2.595463 GCTGCTGCCTTGTGACCA 60.595 61.111 3.85 0.00 0.00 4.02
3324 6025 1.458639 AAAGCTGCTGCCTTGTGACC 61.459 55.000 12.44 0.00 40.80 4.02
3325 6026 1.068954 GTAAAGCTGCTGCCTTGTGAC 60.069 52.381 12.44 0.00 40.80 3.67
3326 6027 1.238439 GTAAAGCTGCTGCCTTGTGA 58.762 50.000 12.44 0.00 40.80 3.58
3327 6028 0.242017 GGTAAAGCTGCTGCCTTGTG 59.758 55.000 12.44 0.00 40.80 3.33
3328 6029 0.178992 TGGTAAAGCTGCTGCCTTGT 60.179 50.000 12.44 0.00 40.80 3.16
3329 6030 0.242017 GTGGTAAAGCTGCTGCCTTG 59.758 55.000 12.44 0.00 40.80 3.61
3330 6031 0.111253 AGTGGTAAAGCTGCTGCCTT 59.889 50.000 12.44 8.34 40.80 4.35
3331 6032 0.607489 CAGTGGTAAAGCTGCTGCCT 60.607 55.000 12.44 2.45 40.80 4.75
3332 6033 1.878775 CAGTGGTAAAGCTGCTGCC 59.121 57.895 12.44 7.07 40.80 4.85
3348 6049 1.746220 ACTAGTAGAGCCTTGACGCAG 59.254 52.381 3.59 0.00 0.00 5.18
3349 6050 1.835494 ACTAGTAGAGCCTTGACGCA 58.165 50.000 3.59 0.00 0.00 5.24
3350 6051 4.291783 CATTACTAGTAGAGCCTTGACGC 58.708 47.826 3.59 0.00 0.00 5.19
3351 6052 4.036971 AGCATTACTAGTAGAGCCTTGACG 59.963 45.833 19.19 0.00 0.00 4.35
3352 6053 5.523438 AGCATTACTAGTAGAGCCTTGAC 57.477 43.478 19.19 0.00 0.00 3.18
3353 6054 6.546428 AAAGCATTACTAGTAGAGCCTTGA 57.454 37.500 19.19 0.00 0.00 3.02
3354 6055 8.768955 CATTAAAGCATTACTAGTAGAGCCTTG 58.231 37.037 19.19 10.10 0.00 3.61
3355 6056 7.442666 GCATTAAAGCATTACTAGTAGAGCCTT 59.557 37.037 19.19 16.27 0.00 4.35
3356 6057 6.931840 GCATTAAAGCATTACTAGTAGAGCCT 59.068 38.462 19.19 12.42 0.00 4.58
3357 6058 6.931840 AGCATTAAAGCATTACTAGTAGAGCC 59.068 38.462 19.19 7.46 36.85 4.70
3358 6059 7.870445 AGAGCATTAAAGCATTACTAGTAGAGC 59.130 37.037 16.55 16.55 36.85 4.09
3359 6060 9.405587 GAGAGCATTAAAGCATTACTAGTAGAG 57.594 37.037 3.59 1.30 36.85 2.43
3360 6061 9.137459 AGAGAGCATTAAAGCATTACTAGTAGA 57.863 33.333 3.59 0.00 36.85 2.59
3361 6062 9.405587 GAGAGAGCATTAAAGCATTACTAGTAG 57.594 37.037 5.36 0.00 36.85 2.57
3362 6063 9.137459 AGAGAGAGCATTAAAGCATTACTAGTA 57.863 33.333 5.36 0.00 36.85 1.82
3363 6064 8.017418 AGAGAGAGCATTAAAGCATTACTAGT 57.983 34.615 5.36 0.00 36.85 2.57
3364 6065 8.885494 AAGAGAGAGCATTAAAGCATTACTAG 57.115 34.615 5.36 0.00 36.85 2.57
3365 6066 9.672673 AAAAGAGAGAGCATTAAAGCATTACTA 57.327 29.630 5.36 0.00 36.85 1.82
3366 6067 8.572855 AAAAGAGAGAGCATTAAAGCATTACT 57.427 30.769 5.36 0.00 36.85 2.24
3409 6110 9.064706 GGAGTACATAATTACAGCTAGAGTACA 57.935 37.037 0.00 0.00 33.62 2.90
3412 6113 7.014422 GGTGGAGTACATAATTACAGCTAGAGT 59.986 40.741 0.00 0.00 0.00 3.24
3474 7167 1.967066 CCGGAGCTCCACTGATAGATT 59.033 52.381 31.67 0.00 35.14 2.40
3484 7177 3.520691 ACTACATATACCGGAGCTCCA 57.479 47.619 31.67 13.83 35.14 3.86
3485 7178 3.614390 GCAACTACATATACCGGAGCTCC 60.614 52.174 23.79 23.79 0.00 4.70
3487 7180 3.231818 AGCAACTACATATACCGGAGCT 58.768 45.455 9.46 0.00 0.00 4.09
3488 7181 3.662247 AGCAACTACATATACCGGAGC 57.338 47.619 9.46 0.00 0.00 4.70
3490 7183 6.720112 AAGTTAGCAACTACATATACCGGA 57.280 37.500 9.46 0.00 41.91 5.14
3492 7185 6.087291 GCGTAAGTTAGCAACTACATATACCG 59.913 42.308 2.60 0.00 41.91 4.02
3493 7186 6.919662 TGCGTAAGTTAGCAACTACATATACC 59.080 38.462 5.02 0.00 41.91 2.73
3494 7187 7.919313 TGCGTAAGTTAGCAACTACATATAC 57.081 36.000 5.02 1.76 41.91 1.47
3553 7422 3.880490 TGAAATAAATACCGGCGCTTCAT 59.120 39.130 7.64 0.00 0.00 2.57
3556 7425 3.011119 TGTGAAATAAATACCGGCGCTT 58.989 40.909 7.64 0.00 0.00 4.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.