Multiple sequence alignment - TraesCS6A01G089100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G089100 chr6A 100.000 4395 0 0 1 4395 57687193 57691587 0.000000e+00 8117.0
1 TraesCS6A01G089100 chr6A 90.741 54 5 0 678 731 20297367 20297314 6.100000e-09 73.1
2 TraesCS6A01G089100 chrUn 95.018 1405 62 7 2995 4395 19246054 19244654 0.000000e+00 2200.0
3 TraesCS6A01G089100 chrUn 94.493 345 15 1 896 1236 19247137 19246793 3.010000e-146 529.0
4 TraesCS6A01G089100 chrUn 94.684 301 14 2 1733 2033 333923236 333922938 2.390000e-127 466.0
5 TraesCS6A01G089100 chrUn 94.684 301 14 2 1733 2033 333939749 333939451 2.390000e-127 466.0
6 TraesCS6A01G089100 chrUn 90.260 154 10 4 1391 1544 19246735 19246587 3.470000e-46 196.0
7 TraesCS6A01G089100 chrUn 91.667 108 7 2 2868 2975 19246508 19246403 9.850000e-32 148.0
8 TraesCS6A01G089100 chr6B 94.763 1413 57 9 2995 4395 93433859 93435266 0.000000e+00 2183.0
9 TraesCS6A01G089100 chr6B 96.672 1262 13 3 1589 2821 693800755 693799494 0.000000e+00 2071.0
10 TraesCS6A01G089100 chr6B 98.697 921 9 1 1589 2506 449774358 449773438 0.000000e+00 1631.0
11 TraesCS6A01G089100 chr6B 94.054 370 14 6 2457 2820 688766279 688765912 4.970000e-154 555.0
12 TraesCS6A01G089100 chr6B 96.341 328 6 2 2496 2820 449773483 449773159 6.470000e-148 534.0
13 TraesCS6A01G089100 chr6B 85.049 515 25 21 2040 2543 688766702 688766229 1.110000e-130 477.0
14 TraesCS6A01G089100 chr6B 96.923 65 2 0 940 1004 93433386 93433450 4.650000e-20 110.0
15 TraesCS6A01G089100 chr3B 96.323 1251 15 13 1581 2826 24006950 24005726 0.000000e+00 2026.0
16 TraesCS6A01G089100 chr3B 88.208 653 29 21 2214 2820 9366064 9366714 0.000000e+00 736.0
17 TraesCS6A01G089100 chr3B 90.885 373 21 9 2457 2821 27178107 27177740 5.110000e-134 488.0
18 TraesCS6A01G089100 chr3B 85.421 487 19 21 2040 2515 27178530 27178085 4.010000e-125 459.0
19 TraesCS6A01G089100 chr3B 96.970 33 1 0 636 668 168971796 168971764 6.140000e-04 56.5
20 TraesCS6A01G089100 chr2B 94.903 1236 12 3 1589 2821 689775763 689774576 0.000000e+00 1886.0
21 TraesCS6A01G089100 chr2B 88.379 327 21 13 198 514 72194273 72194592 1.150000e-100 377.0
22 TraesCS6A01G089100 chr2B 92.941 170 11 1 642 811 72199286 72199454 3.390000e-61 246.0
23 TraesCS6A01G089100 chr4B 98.744 637 5 1 1840 2473 619603128 619603764 0.000000e+00 1129.0
24 TraesCS6A01G089100 chr4B 96.096 333 9 2 2493 2821 619604110 619604442 1.390000e-149 540.0
25 TraesCS6A01G089100 chr4B 100.000 260 0 0 1589 1848 619602715 619602974 8.550000e-132 481.0
26 TraesCS6A01G089100 chr1B 91.173 827 33 22 2005 2823 538163212 538162418 0.000000e+00 1086.0
27 TraesCS6A01G089100 chr1B 90.909 627 40 12 202 812 35636802 35636177 0.000000e+00 826.0
28 TraesCS6A01G089100 chr1B 97.572 453 11 0 1581 2033 538163728 538163276 0.000000e+00 776.0
29 TraesCS6A01G089100 chr1B 88.995 627 45 15 202 812 35485606 35484988 0.000000e+00 754.0
30 TraesCS6A01G089100 chr1B 75.862 667 82 43 942 1580 283111491 283112106 2.610000e-67 267.0
31 TraesCS6A01G089100 chr1B 92.143 140 7 3 67 206 35638025 35637890 1.250000e-45 195.0
32 TraesCS6A01G089100 chr2A 85.956 826 38 30 2040 2820 240766691 240765899 0.000000e+00 811.0
33 TraesCS6A01G089100 chr2A 87.061 456 36 6 1589 2033 240778491 240778048 1.100000e-135 494.0
34 TraesCS6A01G089100 chr2A 79.576 661 88 31 942 1580 256213791 256214426 3.140000e-116 429.0
35 TraesCS6A01G089100 chr2A 90.717 237 14 5 199 428 704606687 704606452 4.270000e-80 309.0
36 TraesCS6A01G089100 chr1A 85.557 817 48 34 2040 2820 554841825 554842607 0.000000e+00 791.0
37 TraesCS6A01G089100 chr1A 86.638 464 39 6 1581 2033 554838758 554839209 3.950000e-135 492.0
38 TraesCS6A01G089100 chr5B 95.571 429 15 1 1609 2033 712464436 712464008 0.000000e+00 684.0
39 TraesCS6A01G089100 chr7A 85.714 658 40 23 199 811 39841106 39841754 0.000000e+00 645.0
40 TraesCS6A01G089100 chr6D 77.582 455 54 28 319 752 287068799 287068372 9.510000e-57 231.0
41 TraesCS6A01G089100 chr6D 79.798 297 38 17 1290 1580 109684438 109684718 3.470000e-46 196.0
42 TraesCS6A01G089100 chr3A 79.839 248 31 14 1290 1530 177863681 177863446 3.520000e-36 163.0
43 TraesCS6A01G089100 chr7B 74.580 417 69 26 317 717 710152458 710152853 9.850000e-32 148.0
44 TraesCS6A01G089100 chr2D 92.308 52 4 0 680 731 501305190 501305139 1.700000e-09 75.0
45 TraesCS6A01G089100 chr5D 85.333 75 3 6 648 715 41670924 41670851 2.190000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G089100 chr6A 57687193 57691587 4394 False 8117.000000 8117 100.0000 1 4395 1 chr6A.!!$F1 4394
1 TraesCS6A01G089100 chrUn 19244654 19247137 2483 True 768.250000 2200 92.8595 896 4395 4 chrUn.!!$R3 3499
2 TraesCS6A01G089100 chr6B 693799494 693800755 1261 True 2071.000000 2071 96.6720 1589 2821 1 chr6B.!!$R1 1232
3 TraesCS6A01G089100 chr6B 93433386 93435266 1880 False 1146.500000 2183 95.8430 940 4395 2 chr6B.!!$F1 3455
4 TraesCS6A01G089100 chr6B 449773159 449774358 1199 True 1082.500000 1631 97.5190 1589 2820 2 chr6B.!!$R2 1231
5 TraesCS6A01G089100 chr6B 688765912 688766702 790 True 516.000000 555 89.5515 2040 2820 2 chr6B.!!$R3 780
6 TraesCS6A01G089100 chr3B 24005726 24006950 1224 True 2026.000000 2026 96.3230 1581 2826 1 chr3B.!!$R1 1245
7 TraesCS6A01G089100 chr3B 9366064 9366714 650 False 736.000000 736 88.2080 2214 2820 1 chr3B.!!$F1 606
8 TraesCS6A01G089100 chr3B 27177740 27178530 790 True 473.500000 488 88.1530 2040 2821 2 chr3B.!!$R3 781
9 TraesCS6A01G089100 chr2B 689774576 689775763 1187 True 1886.000000 1886 94.9030 1589 2821 1 chr2B.!!$R1 1232
10 TraesCS6A01G089100 chr4B 619602715 619604442 1727 False 716.666667 1129 98.2800 1589 2821 3 chr4B.!!$F1 1232
11 TraesCS6A01G089100 chr1B 538162418 538163728 1310 True 931.000000 1086 94.3725 1581 2823 2 chr1B.!!$R3 1242
12 TraesCS6A01G089100 chr1B 35484988 35485606 618 True 754.000000 754 88.9950 202 812 1 chr1B.!!$R1 610
13 TraesCS6A01G089100 chr1B 35636177 35638025 1848 True 510.500000 826 91.5260 67 812 2 chr1B.!!$R2 745
14 TraesCS6A01G089100 chr1B 283111491 283112106 615 False 267.000000 267 75.8620 942 1580 1 chr1B.!!$F1 638
15 TraesCS6A01G089100 chr2A 240765899 240766691 792 True 811.000000 811 85.9560 2040 2820 1 chr2A.!!$R1 780
16 TraesCS6A01G089100 chr2A 256213791 256214426 635 False 429.000000 429 79.5760 942 1580 1 chr2A.!!$F1 638
17 TraesCS6A01G089100 chr1A 554838758 554842607 3849 False 641.500000 791 86.0975 1581 2820 2 chr1A.!!$F1 1239
18 TraesCS6A01G089100 chr7A 39841106 39841754 648 False 645.000000 645 85.7140 199 811 1 chr7A.!!$F1 612

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
65 66 0.029035 CTCCGATCCCTTCGTACGTG 59.971 60.0 16.05 9.41 46.65 4.49 F
885 886 0.038709 GCTCTGCTCGTGTTCTGACT 60.039 55.0 0.00 0.00 0.00 3.41 F
1546 1663 0.040058 TGGAACTGGCAGGCATGAAT 59.960 50.0 20.34 0.00 0.00 2.57 F
2897 6998 0.108520 GTGCCTGTTCATGCATTGGG 60.109 55.0 0.00 0.00 40.07 4.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1356 1463 0.108424 CAAGCTCACTCTTCCTCCCG 60.108 60.000 0.00 0.00 0.00 5.14 R
2840 6941 2.746904 CTGTTCCGTTTGATATGTGCCA 59.253 45.455 0.00 0.00 0.00 4.92 R
2980 7081 0.036732 AACGATGTCCATGTGGCTGT 59.963 50.000 0.00 0.00 34.44 4.40 R
3753 8368 0.319405 AGGCAGCTGAAATGCAAACC 59.681 50.000 20.43 5.42 45.68 3.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 2.813100 TTTTTCGTCCGTCGCTACC 58.187 52.632 0.00 0.00 39.67 3.18
25 26 1.003262 TTTTTCGTCCGTCGCTACCG 61.003 55.000 0.00 0.00 39.67 4.02
26 27 1.851021 TTTTCGTCCGTCGCTACCGA 61.851 55.000 0.00 0.00 42.01 4.69
27 28 1.647545 TTTCGTCCGTCGCTACCGAT 61.648 55.000 0.00 0.00 46.38 4.18
28 29 2.040213 TTCGTCCGTCGCTACCGATC 62.040 60.000 0.00 0.00 46.38 3.69
29 30 2.052414 GTCCGTCGCTACCGATCG 60.052 66.667 8.51 8.51 46.38 3.69
30 31 3.945434 TCCGTCGCTACCGATCGC 61.945 66.667 10.32 0.00 46.38 4.58
31 32 3.950254 CCGTCGCTACCGATCGCT 61.950 66.667 10.32 0.00 46.38 4.93
32 33 2.722548 CGTCGCTACCGATCGCTG 60.723 66.667 10.32 0.00 46.38 5.18
33 34 2.713770 GTCGCTACCGATCGCTGA 59.286 61.111 10.32 0.00 46.38 4.26
34 35 1.654743 GTCGCTACCGATCGCTGAC 60.655 63.158 10.32 8.44 46.38 3.51
35 36 1.818363 TCGCTACCGATCGCTGACT 60.818 57.895 10.32 0.00 38.82 3.41
36 37 1.064296 CGCTACCGATCGCTGACTT 59.936 57.895 10.32 0.00 36.29 3.01
37 38 1.202973 CGCTACCGATCGCTGACTTG 61.203 60.000 10.32 0.00 36.29 3.16
38 39 0.100682 GCTACCGATCGCTGACTTGA 59.899 55.000 10.32 0.00 0.00 3.02
39 40 1.828832 CTACCGATCGCTGACTTGAC 58.171 55.000 10.32 0.00 0.00 3.18
40 41 0.098200 TACCGATCGCTGACTTGACG 59.902 55.000 10.32 0.00 0.00 4.35
41 42 2.508891 CCGATCGCTGACTTGACGC 61.509 63.158 10.32 0.00 0.00 5.19
42 43 1.801512 CGATCGCTGACTTGACGCA 60.802 57.895 0.26 0.00 0.00 5.24
43 44 1.142185 CGATCGCTGACTTGACGCAT 61.142 55.000 0.26 0.00 0.00 4.73
44 45 0.574454 GATCGCTGACTTGACGCATC 59.426 55.000 0.00 0.00 0.00 3.91
45 46 0.807667 ATCGCTGACTTGACGCATCC 60.808 55.000 0.00 0.00 0.00 3.51
46 47 2.456119 CGCTGACTTGACGCATCCC 61.456 63.158 0.00 0.00 0.00 3.85
47 48 1.078848 GCTGACTTGACGCATCCCT 60.079 57.895 0.00 0.00 0.00 4.20
48 49 1.086634 GCTGACTTGACGCATCCCTC 61.087 60.000 0.00 0.00 0.00 4.30
49 50 0.460987 CTGACTTGACGCATCCCTCC 60.461 60.000 0.00 0.00 0.00 4.30
50 51 1.519455 GACTTGACGCATCCCTCCG 60.519 63.158 0.00 0.00 0.00 4.63
51 52 1.945354 GACTTGACGCATCCCTCCGA 61.945 60.000 0.00 0.00 0.00 4.55
52 53 1.330655 ACTTGACGCATCCCTCCGAT 61.331 55.000 0.00 0.00 0.00 4.18
53 54 0.598680 CTTGACGCATCCCTCCGATC 60.599 60.000 0.00 0.00 0.00 3.69
54 55 2.028125 TTGACGCATCCCTCCGATCC 62.028 60.000 0.00 0.00 0.00 3.36
55 56 3.227792 GACGCATCCCTCCGATCCC 62.228 68.421 0.00 0.00 0.00 3.85
56 57 2.919856 CGCATCCCTCCGATCCCT 60.920 66.667 0.00 0.00 0.00 4.20
57 58 2.511452 CGCATCCCTCCGATCCCTT 61.511 63.158 0.00 0.00 0.00 3.95
58 59 1.373059 GCATCCCTCCGATCCCTTC 59.627 63.158 0.00 0.00 0.00 3.46
60 61 1.115930 CATCCCTCCGATCCCTTCGT 61.116 60.000 0.00 0.00 46.65 3.85
61 62 0.481567 ATCCCTCCGATCCCTTCGTA 59.518 55.000 0.00 0.00 46.65 3.43
62 63 0.466922 TCCCTCCGATCCCTTCGTAC 60.467 60.000 0.00 0.00 46.65 3.67
63 64 1.653115 CCTCCGATCCCTTCGTACG 59.347 63.158 9.53 9.53 46.65 3.67
64 65 1.099879 CCTCCGATCCCTTCGTACGT 61.100 60.000 16.05 0.00 46.65 3.57
65 66 0.029035 CTCCGATCCCTTCGTACGTG 59.971 60.000 16.05 9.41 46.65 4.49
81 82 1.867919 CGTGGCTTCTCTCCTCACGT 61.868 60.000 0.00 0.00 43.92 4.49
82 83 1.174783 GTGGCTTCTCTCCTCACGTA 58.825 55.000 0.00 0.00 0.00 3.57
107 108 1.804748 GACTCTAAGCCCGTTTTGTGG 59.195 52.381 0.00 0.00 0.00 4.17
145 146 3.426615 CTTAGTTATGGGCCAAACCACA 58.573 45.455 11.89 2.66 44.72 4.17
160 161 1.582968 CACATGTGTGGGCTTGCTC 59.417 57.895 18.03 0.00 42.10 4.26
168 169 1.150536 TGGGCTTGCTCGTCCTTTT 59.849 52.632 0.00 0.00 0.00 2.27
192 193 9.766277 TTTAGTGCAAAAACAAAATGTCAATTC 57.234 25.926 0.00 0.00 0.00 2.17
238 239 7.504924 AGTACAACTAATTAGCAGCACAAAA 57.495 32.000 12.54 0.00 0.00 2.44
239 240 8.110860 AGTACAACTAATTAGCAGCACAAAAT 57.889 30.769 12.54 0.00 0.00 1.82
240 241 8.576442 AGTACAACTAATTAGCAGCACAAAATT 58.424 29.630 12.54 0.00 0.00 1.82
241 242 9.191995 GTACAACTAATTAGCAGCACAAAATTT 57.808 29.630 12.54 0.00 0.00 1.82
243 244 9.757227 ACAACTAATTAGCAGCACAAAATTTAA 57.243 25.926 12.54 0.00 0.00 1.52
246 247 9.981114 ACTAATTAGCAGCACAAAATTTAAAGT 57.019 25.926 12.54 0.00 0.00 2.66
249 250 9.981114 AATTAGCAGCACAAAATTTAAAGTAGT 57.019 25.926 0.00 0.00 0.00 2.73
251 252 9.887406 TTAGCAGCACAAAATTTAAAGTAGTAC 57.113 29.630 0.00 0.00 0.00 2.73
252 253 7.936584 AGCAGCACAAAATTTAAAGTAGTACA 58.063 30.769 2.52 0.00 0.00 2.90
253 254 8.576442 AGCAGCACAAAATTTAAAGTAGTACAT 58.424 29.630 2.52 0.00 0.00 2.29
254 255 8.638565 GCAGCACAAAATTTAAAGTAGTACATG 58.361 33.333 2.52 0.00 0.00 3.21
255 256 8.638565 CAGCACAAAATTTAAAGTAGTACATGC 58.361 33.333 2.52 0.00 0.00 4.06
256 257 8.356657 AGCACAAAATTTAAAGTAGTACATGCA 58.643 29.630 2.52 0.00 0.00 3.96
257 258 8.973378 GCACAAAATTTAAAGTAGTACATGCAA 58.027 29.630 2.52 0.00 0.00 4.08
264 265 8.840833 TTTAAAGTAGTACATGCAATCACAGA 57.159 30.769 2.52 0.00 0.00 3.41
265 266 9.448438 TTTAAAGTAGTACATGCAATCACAGAT 57.552 29.630 2.52 0.00 0.00 2.90
266 267 7.928307 AAAGTAGTACATGCAATCACAGATT 57.072 32.000 2.52 0.00 0.00 2.40
267 268 7.928307 AAGTAGTACATGCAATCACAGATTT 57.072 32.000 2.52 0.00 0.00 2.17
268 269 7.928307 AGTAGTACATGCAATCACAGATTTT 57.072 32.000 2.52 0.00 0.00 1.82
269 270 8.340618 AGTAGTACATGCAATCACAGATTTTT 57.659 30.769 2.52 0.00 0.00 1.94
323 324 9.883142 AATGTGTCTGTTTCTTTTTAATTTCCA 57.117 25.926 0.00 0.00 0.00 3.53
386 387 9.800433 AATATTGCATAATGTTTGAAATCGTGA 57.200 25.926 0.00 0.00 0.00 4.35
387 388 9.800433 ATATTGCATAATGTTTGAAATCGTGAA 57.200 25.926 0.00 0.00 0.00 3.18
388 389 8.706492 ATTGCATAATGTTTGAAATCGTGAAT 57.294 26.923 0.00 0.00 0.00 2.57
389 390 9.800433 ATTGCATAATGTTTGAAATCGTGAATA 57.200 25.926 0.00 0.00 0.00 1.75
390 391 9.631452 TTGCATAATGTTTGAAATCGTGAATAA 57.369 25.926 0.00 0.00 0.00 1.40
391 392 9.631452 TGCATAATGTTTGAAATCGTGAATAAA 57.369 25.926 0.00 0.00 0.00 1.40
407 408 9.574458 TCGTGAATAAATTTTCAAGTTCAAACA 57.426 25.926 0.00 0.00 37.36 2.83
421 422 9.549078 TCAAGTTCAAACAAACTTTTAAAACCT 57.451 25.926 0.00 0.00 44.95 3.50
422 423 9.592720 CAAGTTCAAACAAACTTTTAAAACCTG 57.407 29.630 0.00 0.00 44.95 4.00
423 424 9.549078 AAGTTCAAACAAACTTTTAAAACCTGA 57.451 25.926 0.00 0.00 44.95 3.86
424 425 9.549078 AGTTCAAACAAACTTTTAAAACCTGAA 57.451 25.926 0.00 0.00 36.02 3.02
425 426 9.588774 GTTCAAACAAACTTTTAAAACCTGAAC 57.411 29.630 0.00 5.31 33.38 3.18
426 427 8.888579 TCAAACAAACTTTTAAAACCTGAACA 57.111 26.923 0.00 0.00 0.00 3.18
427 428 9.326413 TCAAACAAACTTTTAAAACCTGAACAA 57.674 25.926 0.00 0.00 0.00 2.83
434 435 8.275015 ACTTTTAAAACCTGAACAATTTTGGG 57.725 30.769 0.00 0.00 0.00 4.12
435 436 8.103935 ACTTTTAAAACCTGAACAATTTTGGGA 58.896 29.630 0.00 0.00 0.00 4.37
436 437 7.851387 TTTAAAACCTGAACAATTTTGGGAC 57.149 32.000 0.00 0.00 0.00 4.46
437 438 5.428184 AAAACCTGAACAATTTTGGGACA 57.572 34.783 0.00 0.00 0.00 4.02
596 597 6.839124 TGCTGAACATATTTGAATCCACTT 57.161 33.333 0.00 0.00 0.00 3.16
597 598 7.230849 TGCTGAACATATTTGAATCCACTTT 57.769 32.000 0.00 0.00 0.00 2.66
598 599 7.092079 TGCTGAACATATTTGAATCCACTTTG 58.908 34.615 0.00 0.00 0.00 2.77
599 600 7.039853 TGCTGAACATATTTGAATCCACTTTGA 60.040 33.333 0.00 0.00 0.00 2.69
600 601 7.814107 GCTGAACATATTTGAATCCACTTTGAA 59.186 33.333 0.00 0.00 0.00 2.69
601 602 9.132521 CTGAACATATTTGAATCCACTTTGAAC 57.867 33.333 0.00 0.00 0.00 3.18
602 603 8.637099 TGAACATATTTGAATCCACTTTGAACA 58.363 29.630 0.00 0.00 0.00 3.18
603 604 9.474920 GAACATATTTGAATCCACTTTGAACAA 57.525 29.630 0.00 0.00 0.00 2.83
641 642 9.567848 AAAGTGAACATTTTGTAGTTTACACTG 57.432 29.630 0.00 0.00 38.63 3.66
642 643 8.500753 AGTGAACATTTTGTAGTTTACACTGA 57.499 30.769 0.00 0.00 38.63 3.41
643 644 8.952278 AGTGAACATTTTGTAGTTTACACTGAA 58.048 29.630 0.00 0.00 38.63 3.02
644 645 9.730420 GTGAACATTTTGTAGTTTACACTGAAT 57.270 29.630 0.00 0.00 38.63 2.57
681 682 8.193250 ACACGTTGAACATATATACCTTGAAC 57.807 34.615 0.00 0.00 0.00 3.18
682 683 7.820386 ACACGTTGAACATATATACCTTGAACA 59.180 33.333 0.00 0.00 0.00 3.18
683 684 8.661257 CACGTTGAACATATATACCTTGAACAA 58.339 33.333 0.00 0.00 0.00 2.83
684 685 9.391006 ACGTTGAACATATATACCTTGAACAAT 57.609 29.630 0.00 0.00 0.00 2.71
719 720 7.969387 ACATTGAACATTTTGTGATATACGC 57.031 32.000 0.00 0.00 0.00 4.42
720 721 7.761409 ACATTGAACATTTTGTGATATACGCT 58.239 30.769 0.00 0.00 0.00 5.07
721 722 7.697710 ACATTGAACATTTTGTGATATACGCTG 59.302 33.333 0.00 0.00 0.00 5.18
722 723 5.568482 TGAACATTTTGTGATATACGCTGC 58.432 37.500 0.00 0.00 0.00 5.25
723 724 5.123027 TGAACATTTTGTGATATACGCTGCA 59.877 36.000 0.00 0.00 0.00 4.41
724 725 4.908736 ACATTTTGTGATATACGCTGCAC 58.091 39.130 0.00 0.00 0.00 4.57
725 726 4.394610 ACATTTTGTGATATACGCTGCACA 59.605 37.500 0.00 0.00 39.27 4.57
726 727 5.106357 ACATTTTGTGATATACGCTGCACAA 60.106 36.000 0.00 0.00 46.06 3.33
729 730 5.559427 TTGTGATATACGCTGCACAAATT 57.441 34.783 0.00 0.00 45.13 1.82
730 731 5.559427 TGTGATATACGCTGCACAAATTT 57.441 34.783 0.00 0.00 38.21 1.82
731 732 5.331098 TGTGATATACGCTGCACAAATTTG 58.669 37.500 16.67 16.67 38.21 2.32
732 733 4.734854 GTGATATACGCTGCACAAATTTGG 59.265 41.667 21.74 11.81 0.00 3.28
733 734 4.637977 TGATATACGCTGCACAAATTTGGA 59.362 37.500 21.74 5.07 0.00 3.53
734 735 2.987413 TACGCTGCACAAATTTGGAG 57.013 45.000 21.74 14.45 37.96 3.86
735 736 1.317613 ACGCTGCACAAATTTGGAGA 58.682 45.000 21.74 4.39 37.11 3.71
736 737 1.888512 ACGCTGCACAAATTTGGAGAT 59.111 42.857 21.74 0.00 37.11 2.75
737 738 2.256174 CGCTGCACAAATTTGGAGATG 58.744 47.619 21.74 11.86 37.11 2.90
738 739 1.997606 GCTGCACAAATTTGGAGATGC 59.002 47.619 21.74 20.36 37.11 3.91
739 740 2.610976 GCTGCACAAATTTGGAGATGCA 60.611 45.455 24.33 24.33 40.57 3.96
740 741 3.655486 CTGCACAAATTTGGAGATGCAA 58.345 40.909 25.27 14.67 42.11 4.08
741 742 4.059511 CTGCACAAATTTGGAGATGCAAA 58.940 39.130 25.27 11.31 42.11 3.68
742 743 3.808726 TGCACAAATTTGGAGATGCAAAC 59.191 39.130 23.98 4.21 39.94 2.93
743 744 3.808726 GCACAAATTTGGAGATGCAAACA 59.191 39.130 21.74 0.00 33.27 2.83
744 745 4.272991 GCACAAATTTGGAGATGCAAACAA 59.727 37.500 21.74 0.00 33.27 2.83
745 746 5.220815 GCACAAATTTGGAGATGCAAACAAA 60.221 36.000 21.74 9.74 37.25 2.83
746 747 6.513720 GCACAAATTTGGAGATGCAAACAAAT 60.514 34.615 21.74 12.53 43.20 2.32
748 749 7.377397 CACAAATTTGGAGATGCAAACAAATTG 59.623 33.333 21.74 19.57 46.71 2.32
749 750 7.282675 ACAAATTTGGAGATGCAAACAAATTGA 59.717 29.630 21.74 2.86 46.71 2.57
750 751 7.804843 AATTTGGAGATGCAAACAAATTGAA 57.195 28.000 22.10 1.52 46.07 2.69
751 752 7.804843 ATTTGGAGATGCAAACAAATTGAAA 57.195 28.000 0.00 0.00 39.69 2.69
752 753 6.847956 TTGGAGATGCAAACAAATTGAAAG 57.152 33.333 0.00 0.00 41.85 2.62
753 754 5.916318 TGGAGATGCAAACAAATTGAAAGT 58.084 33.333 0.00 0.00 41.85 2.66
754 755 5.754406 TGGAGATGCAAACAAATTGAAAGTG 59.246 36.000 0.00 0.00 41.85 3.16
755 756 5.984926 GGAGATGCAAACAAATTGAAAGTGA 59.015 36.000 0.00 0.00 41.85 3.41
756 757 6.479660 GGAGATGCAAACAAATTGAAAGTGAA 59.520 34.615 0.00 0.00 41.85 3.18
757 758 7.237920 AGATGCAAACAAATTGAAAGTGAAC 57.762 32.000 0.00 0.00 41.85 3.18
758 759 6.817641 AGATGCAAACAAATTGAAAGTGAACA 59.182 30.769 0.00 0.00 41.85 3.18
759 760 6.791887 TGCAAACAAATTGAAAGTGAACAA 57.208 29.167 0.00 0.00 41.85 2.83
760 761 7.194607 TGCAAACAAATTGAAAGTGAACAAA 57.805 28.000 0.00 0.00 41.85 2.83
761 762 7.642669 TGCAAACAAATTGAAAGTGAACAAAA 58.357 26.923 0.00 0.00 41.85 2.44
762 763 8.295288 TGCAAACAAATTGAAAGTGAACAAAAT 58.705 25.926 0.00 0.00 41.85 1.82
763 764 9.127006 GCAAACAAATTGAAAGTGAACAAAATT 57.873 25.926 0.00 0.00 41.85 1.82
773 774 9.487790 TGAAAGTGAACAAAATTTTGAAAGAGT 57.512 25.926 32.20 15.11 40.55 3.24
778 779 9.967245 GTGAACAAAATTTTGAAAGAGTTAACC 57.033 29.630 32.20 8.35 40.55 2.85
779 780 9.157104 TGAACAAAATTTTGAAAGAGTTAACCC 57.843 29.630 32.20 8.06 40.55 4.11
780 781 9.378551 GAACAAAATTTTGAAAGAGTTAACCCT 57.621 29.630 32.20 6.51 40.55 4.34
781 782 9.733556 AACAAAATTTTGAAAGAGTTAACCCTT 57.266 25.926 32.20 11.66 40.55 3.95
782 783 9.733556 ACAAAATTTTGAAAGAGTTAACCCTTT 57.266 25.926 32.20 14.23 40.55 3.11
785 786 8.642908 AATTTTGAAAGAGTTAACCCTTTTCG 57.357 30.769 15.29 0.00 33.23 3.46
786 787 5.761165 TTGAAAGAGTTAACCCTTTTCGG 57.239 39.130 15.29 0.00 33.23 4.30
787 788 5.038651 TGAAAGAGTTAACCCTTTTCGGA 57.961 39.130 15.29 0.01 33.23 4.55
788 789 5.438833 TGAAAGAGTTAACCCTTTTCGGAA 58.561 37.500 15.29 0.00 33.23 4.30
789 790 5.887035 TGAAAGAGTTAACCCTTTTCGGAAA 59.113 36.000 15.29 0.00 33.23 3.13
790 791 5.762825 AAGAGTTAACCCTTTTCGGAAAC 57.237 39.130 1.96 0.00 33.16 2.78
791 792 4.784177 AGAGTTAACCCTTTTCGGAAACA 58.216 39.130 1.96 0.00 33.16 2.83
792 793 5.195185 AGAGTTAACCCTTTTCGGAAACAA 58.805 37.500 1.96 0.00 33.16 2.83
793 794 5.298527 AGAGTTAACCCTTTTCGGAAACAAG 59.701 40.000 1.96 0.00 33.16 3.16
794 795 5.195185 AGTTAACCCTTTTCGGAAACAAGA 58.805 37.500 1.96 0.00 33.16 3.02
795 796 5.653330 AGTTAACCCTTTTCGGAAACAAGAA 59.347 36.000 1.96 0.00 33.16 2.52
796 797 4.649088 AACCCTTTTCGGAAACAAGAAG 57.351 40.909 1.96 0.00 33.16 2.85
797 798 3.893521 ACCCTTTTCGGAAACAAGAAGA 58.106 40.909 1.96 0.00 33.16 2.87
798 799 3.883489 ACCCTTTTCGGAAACAAGAAGAG 59.117 43.478 1.96 0.00 33.16 2.85
799 800 3.883489 CCCTTTTCGGAAACAAGAAGAGT 59.117 43.478 1.96 0.00 33.16 3.24
800 801 4.338400 CCCTTTTCGGAAACAAGAAGAGTT 59.662 41.667 1.96 0.00 33.16 3.01
801 802 5.163550 CCCTTTTCGGAAACAAGAAGAGTTT 60.164 40.000 1.96 0.00 41.53 2.66
811 812 8.399768 GAAACAAGAAGAGTTTCCTCAAAAAG 57.600 34.615 7.39 0.00 45.58 2.27
812 813 7.703058 AACAAGAAGAGTTTCCTCAAAAAGA 57.297 32.000 0.00 0.00 40.40 2.52
813 814 7.703058 ACAAGAAGAGTTTCCTCAAAAAGAA 57.297 32.000 0.00 0.00 40.40 2.52
814 815 8.298729 ACAAGAAGAGTTTCCTCAAAAAGAAT 57.701 30.769 0.00 0.00 40.40 2.40
815 816 9.408648 ACAAGAAGAGTTTCCTCAAAAAGAATA 57.591 29.630 0.00 0.00 40.40 1.75
818 819 9.799106 AGAAGAGTTTCCTCAAAAAGAATATCA 57.201 29.630 0.00 0.00 40.40 2.15
822 823 9.578439 GAGTTTCCTCAAAAAGAATATCAATGG 57.422 33.333 0.00 0.00 37.67 3.16
823 824 9.312904 AGTTTCCTCAAAAAGAATATCAATGGA 57.687 29.630 0.00 0.00 0.00 3.41
824 825 9.578439 GTTTCCTCAAAAAGAATATCAATGGAG 57.422 33.333 0.00 0.00 0.00 3.86
825 826 9.532494 TTTCCTCAAAAAGAATATCAATGGAGA 57.468 29.630 0.00 0.00 0.00 3.71
826 827 8.511604 TCCTCAAAAAGAATATCAATGGAGAC 57.488 34.615 0.00 0.00 0.00 3.36
827 828 7.280876 TCCTCAAAAAGAATATCAATGGAGACG 59.719 37.037 0.00 0.00 0.00 4.18
828 829 7.066284 CCTCAAAAAGAATATCAATGGAGACGT 59.934 37.037 0.00 0.00 0.00 4.34
829 830 7.751732 TCAAAAAGAATATCAATGGAGACGTG 58.248 34.615 0.00 0.00 0.00 4.49
830 831 6.683974 AAAAGAATATCAATGGAGACGTGG 57.316 37.500 0.00 0.00 0.00 4.94
831 832 5.614324 AAGAATATCAATGGAGACGTGGA 57.386 39.130 0.00 0.00 32.62 4.02
832 833 4.950050 AGAATATCAATGGAGACGTGGAC 58.050 43.478 0.00 0.00 30.21 4.02
833 834 3.753294 ATATCAATGGAGACGTGGACC 57.247 47.619 0.00 0.00 30.21 4.46
834 835 1.573108 ATCAATGGAGACGTGGACCT 58.427 50.000 0.00 0.00 30.21 3.85
835 836 0.608130 TCAATGGAGACGTGGACCTG 59.392 55.000 0.00 0.00 0.00 4.00
836 837 0.321671 CAATGGAGACGTGGACCTGT 59.678 55.000 0.00 0.00 0.00 4.00
837 838 1.056660 AATGGAGACGTGGACCTGTT 58.943 50.000 0.00 0.00 0.00 3.16
838 839 1.933021 ATGGAGACGTGGACCTGTTA 58.067 50.000 0.00 0.00 0.00 2.41
839 840 1.254026 TGGAGACGTGGACCTGTTAG 58.746 55.000 0.00 0.00 0.00 2.34
840 841 0.531200 GGAGACGTGGACCTGTTAGG 59.469 60.000 0.00 0.00 42.49 2.69
841 842 1.542492 GAGACGTGGACCTGTTAGGA 58.458 55.000 0.00 0.00 37.67 2.94
842 843 1.473278 GAGACGTGGACCTGTTAGGAG 59.527 57.143 0.00 0.00 37.67 3.69
843 844 1.203025 AGACGTGGACCTGTTAGGAGT 60.203 52.381 0.00 0.00 37.67 3.85
844 845 1.201880 GACGTGGACCTGTTAGGAGTC 59.798 57.143 0.00 0.45 37.67 3.36
845 846 1.203025 ACGTGGACCTGTTAGGAGTCT 60.203 52.381 1.13 0.00 37.67 3.24
846 847 1.893801 CGTGGACCTGTTAGGAGTCTT 59.106 52.381 1.13 0.00 37.67 3.01
847 848 2.094649 CGTGGACCTGTTAGGAGTCTTC 60.095 54.545 1.13 0.00 37.67 2.87
848 849 2.234168 GTGGACCTGTTAGGAGTCTTCC 59.766 54.545 1.13 0.00 44.39 3.46
865 866 4.760047 CGGCCCGGGACACTCTTG 62.760 72.222 30.17 4.24 0.00 3.02
866 867 4.410400 GGCCCGGGACACTCTTGG 62.410 72.222 29.31 0.00 0.00 3.61
868 869 3.322466 CCCGGGACACTCTTGGCT 61.322 66.667 18.48 0.00 0.00 4.75
869 870 2.266055 CCGGGACACTCTTGGCTC 59.734 66.667 0.00 0.00 0.00 4.70
870 871 2.286523 CCGGGACACTCTTGGCTCT 61.287 63.158 0.00 0.00 0.00 4.09
871 872 1.079543 CGGGACACTCTTGGCTCTG 60.080 63.158 0.00 0.00 0.00 3.35
872 873 1.376553 GGGACACTCTTGGCTCTGC 60.377 63.158 0.00 0.00 0.00 4.26
873 874 1.676384 GGACACTCTTGGCTCTGCT 59.324 57.895 0.00 0.00 0.00 4.24
874 875 0.390998 GGACACTCTTGGCTCTGCTC 60.391 60.000 0.00 0.00 0.00 4.26
875 876 0.735632 GACACTCTTGGCTCTGCTCG 60.736 60.000 0.00 0.00 0.00 5.03
876 877 1.291588 CACTCTTGGCTCTGCTCGT 59.708 57.895 0.00 0.00 0.00 4.18
877 878 1.013005 CACTCTTGGCTCTGCTCGTG 61.013 60.000 0.00 0.00 0.00 4.35
878 879 1.291588 CTCTTGGCTCTGCTCGTGT 59.708 57.895 0.00 0.00 0.00 4.49
879 880 0.320247 CTCTTGGCTCTGCTCGTGTT 60.320 55.000 0.00 0.00 0.00 3.32
880 881 0.319900 TCTTGGCTCTGCTCGTGTTC 60.320 55.000 0.00 0.00 0.00 3.18
881 882 0.320247 CTTGGCTCTGCTCGTGTTCT 60.320 55.000 0.00 0.00 0.00 3.01
882 883 0.601046 TTGGCTCTGCTCGTGTTCTG 60.601 55.000 0.00 0.00 0.00 3.02
883 884 1.290324 GGCTCTGCTCGTGTTCTGA 59.710 57.895 0.00 0.00 0.00 3.27
884 885 1.011451 GGCTCTGCTCGTGTTCTGAC 61.011 60.000 0.00 0.00 0.00 3.51
885 886 0.038709 GCTCTGCTCGTGTTCTGACT 60.039 55.000 0.00 0.00 0.00 3.41
886 887 1.975837 CTCTGCTCGTGTTCTGACTC 58.024 55.000 0.00 0.00 0.00 3.36
887 888 0.238553 TCTGCTCGTGTTCTGACTCG 59.761 55.000 0.00 0.00 42.41 4.18
888 889 0.238553 CTGCTCGTGTTCTGACTCGA 59.761 55.000 4.08 4.08 45.99 4.04
889 890 0.040336 TGCTCGTGTTCTGACTCGAC 60.040 55.000 0.28 0.31 44.11 4.20
890 891 0.238817 GCTCGTGTTCTGACTCGACT 59.761 55.000 0.28 0.00 44.11 4.18
891 892 1.335142 GCTCGTGTTCTGACTCGACTT 60.335 52.381 0.28 0.00 44.11 3.01
892 893 2.576406 CTCGTGTTCTGACTCGACTTC 58.424 52.381 0.28 0.00 44.11 3.01
893 894 1.944709 TCGTGTTCTGACTCGACTTCA 59.055 47.619 0.28 0.00 44.11 3.02
894 895 2.552743 TCGTGTTCTGACTCGACTTCAT 59.447 45.455 0.28 0.00 44.11 2.57
905 906 1.825474 TCGACTTCATCCTCCTGGAAC 59.175 52.381 0.00 0.00 46.80 3.62
917 918 3.025924 CTGGAACTGGAAGCAAGCA 57.974 52.632 0.00 0.00 37.60 3.91
934 935 0.109735 GCAAAGCACGCTAGGGTTTC 60.110 55.000 10.17 5.34 34.04 2.78
1087 1168 1.521141 GTACGCCCCTCCCTTTCTC 59.479 63.158 0.00 0.00 0.00 2.87
1093 1174 0.692756 CCCCTCCCTTTCTCCTCCTC 60.693 65.000 0.00 0.00 0.00 3.71
1098 1179 1.082954 CCTTTCTCCTCCTCCCCCA 59.917 63.158 0.00 0.00 0.00 4.96
1101 1186 1.492599 CTTTCTCCTCCTCCCCCATTC 59.507 57.143 0.00 0.00 0.00 2.67
1135 1220 2.434359 CCTCGGTTTCGCTGACCC 60.434 66.667 0.00 0.00 33.49 4.46
1228 1335 2.474816 GCAGGATCATCGTAAGTGGTC 58.525 52.381 0.00 0.00 39.48 4.02
1236 1343 6.864165 GGATCATCGTAAGTGGTCTCTAATTC 59.136 42.308 0.00 0.00 39.48 2.17
1242 1349 1.482593 AGTGGTCTCTAATTCCGCTGG 59.517 52.381 0.00 0.00 40.05 4.85
1244 1351 0.106894 GGTCTCTAATTCCGCTGGGG 59.893 60.000 4.03 4.03 37.02 4.96
1245 1352 1.120530 GTCTCTAATTCCGCTGGGGA 58.879 55.000 9.69 9.69 45.40 4.81
1253 1360 6.133356 TCTAATTCCGCTGGGGATTTTTATT 58.867 36.000 21.06 15.94 46.62 1.40
1254 1361 5.692115 AATTCCGCTGGGGATTTTTATTT 57.308 34.783 14.71 0.00 46.62 1.40
1256 1363 6.800072 ATTCCGCTGGGGATTTTTATTTTA 57.200 33.333 14.71 0.00 46.62 1.52
1257 1364 6.800072 TTCCGCTGGGGATTTTTATTTTAT 57.200 33.333 14.71 0.00 46.62 1.40
1258 1365 6.800072 TCCGCTGGGGATTTTTATTTTATT 57.200 33.333 9.69 0.00 40.94 1.40
1259 1366 7.189079 TCCGCTGGGGATTTTTATTTTATTT 57.811 32.000 9.69 0.00 40.94 1.40
1260 1367 7.625469 TCCGCTGGGGATTTTTATTTTATTTT 58.375 30.769 9.69 0.00 40.94 1.82
1261 1368 8.759782 TCCGCTGGGGATTTTTATTTTATTTTA 58.240 29.630 9.69 0.00 40.94 1.52
1262 1369 9.554395 CCGCTGGGGATTTTTATTTTATTTTAT 57.446 29.630 4.46 0.00 38.47 1.40
1275 1382 7.589574 ATTTTATTTTATCCCGTGTTTGTGC 57.410 32.000 0.00 0.00 0.00 4.57
1276 1383 3.586100 ATTTTATCCCGTGTTTGTGCC 57.414 42.857 0.00 0.00 0.00 5.01
1301 1408 3.645268 GATCCCTGGTGGTGGTGCC 62.645 68.421 0.00 0.00 34.77 5.01
1308 1415 2.983592 GTGGTGGTGCCGGAAAGG 60.984 66.667 5.05 0.00 44.97 3.11
1356 1463 3.739077 GCTTCTGCTCTCTGTCCTC 57.261 57.895 0.00 0.00 36.03 3.71
1421 1528 5.586243 GCTCTGCACTCTGTATATGGAAAAA 59.414 40.000 0.00 0.00 0.00 1.94
1448 1555 6.587226 TGTGGTACTACTAGTATTTTGTTGCG 59.413 38.462 10.95 0.00 32.65 4.85
1474 1591 3.273434 CATGGACGGATGAAAGATGTGT 58.727 45.455 0.00 0.00 0.00 3.72
1495 1612 4.036734 TGTCACTCCTGTCTTGAATTTTGC 59.963 41.667 0.00 0.00 0.00 3.68
1515 1632 2.568956 GCTATGGCCACATGAGGAGATA 59.431 50.000 8.16 6.85 37.97 1.98
1544 1661 1.303561 GTGGAACTGGCAGGCATGA 60.304 57.895 20.34 0.00 0.00 3.07
1546 1663 0.040058 TGGAACTGGCAGGCATGAAT 59.960 50.000 20.34 0.00 0.00 2.57
1554 1671 2.240921 TGGCAGGCATGAATGTAGGTTA 59.759 45.455 0.62 0.00 0.00 2.85
2067 5216 1.869132 CCGCAGATGACATGGTGTATG 59.131 52.381 0.00 0.00 42.68 2.39
2832 6933 4.875544 GCTTCGTAGCATTTCCATGTAA 57.124 40.909 9.38 0.00 46.95 2.41
2833 6934 5.424121 GCTTCGTAGCATTTCCATGTAAT 57.576 39.130 9.38 0.00 46.95 1.89
2834 6935 5.444122 GCTTCGTAGCATTTCCATGTAATC 58.556 41.667 9.38 0.00 46.95 1.75
2835 6936 5.560953 GCTTCGTAGCATTTCCATGTAATCC 60.561 44.000 9.38 0.00 46.95 3.01
2836 6937 5.029807 TCGTAGCATTTCCATGTAATCCA 57.970 39.130 0.00 0.00 32.28 3.41
2837 6938 5.432645 TCGTAGCATTTCCATGTAATCCAA 58.567 37.500 0.00 0.00 32.28 3.53
2838 6939 6.061441 TCGTAGCATTTCCATGTAATCCAAT 58.939 36.000 0.00 0.00 32.28 3.16
2839 6940 6.545666 TCGTAGCATTTCCATGTAATCCAATT 59.454 34.615 0.00 0.00 32.28 2.32
2840 6941 7.068103 TCGTAGCATTTCCATGTAATCCAATTT 59.932 33.333 0.00 0.00 32.28 1.82
2841 6942 7.167968 CGTAGCATTTCCATGTAATCCAATTTG 59.832 37.037 0.00 0.00 32.28 2.32
2842 6943 6.350906 AGCATTTCCATGTAATCCAATTTGG 58.649 36.000 9.28 9.28 33.91 3.28
2843 6944 5.007921 GCATTTCCATGTAATCCAATTTGGC 59.992 40.000 10.76 0.00 33.15 4.52
2844 6945 5.752036 TTTCCATGTAATCCAATTTGGCA 57.248 34.783 10.76 3.38 37.47 4.92
2845 6946 4.734398 TCCATGTAATCCAATTTGGCAC 57.266 40.909 10.76 8.72 37.47 5.01
2846 6947 4.092279 TCCATGTAATCCAATTTGGCACA 58.908 39.130 10.76 13.54 37.47 4.57
2847 6948 4.715792 TCCATGTAATCCAATTTGGCACAT 59.284 37.500 10.76 14.98 39.30 3.21
2848 6949 5.896106 TCCATGTAATCCAATTTGGCACATA 59.104 36.000 20.38 10.44 39.30 2.29
2849 6950 6.554228 TCCATGTAATCCAATTTGGCACATAT 59.446 34.615 20.38 5.62 39.30 1.78
2850 6951 6.869913 CCATGTAATCCAATTTGGCACATATC 59.130 38.462 20.38 7.07 39.30 1.63
2851 6952 7.435305 CATGTAATCCAATTTGGCACATATCA 58.565 34.615 20.38 10.85 39.30 2.15
2852 6953 7.415592 TGTAATCCAATTTGGCACATATCAA 57.584 32.000 10.76 0.00 39.30 2.57
2853 6954 7.845037 TGTAATCCAATTTGGCACATATCAAA 58.155 30.769 10.76 0.00 39.30 2.69
2854 6955 7.763528 TGTAATCCAATTTGGCACATATCAAAC 59.236 33.333 10.76 0.55 39.30 2.93
2855 6956 4.742417 TCCAATTTGGCACATATCAAACG 58.258 39.130 10.76 0.00 39.30 3.60
2856 6957 3.864583 CCAATTTGGCACATATCAAACGG 59.135 43.478 1.71 0.00 39.30 4.44
2857 6958 4.381398 CCAATTTGGCACATATCAAACGGA 60.381 41.667 1.71 0.00 39.30 4.69
2858 6959 5.167121 CAATTTGGCACATATCAAACGGAA 58.833 37.500 0.00 0.00 39.30 4.30
2859 6960 3.840890 TTGGCACATATCAAACGGAAC 57.159 42.857 0.00 0.00 39.30 3.62
2860 6961 2.784347 TGGCACATATCAAACGGAACA 58.216 42.857 0.00 0.00 0.00 3.18
2861 6962 2.746904 TGGCACATATCAAACGGAACAG 59.253 45.455 0.00 0.00 0.00 3.16
2862 6963 3.006940 GGCACATATCAAACGGAACAGA 58.993 45.455 0.00 0.00 0.00 3.41
2863 6964 3.438781 GGCACATATCAAACGGAACAGAA 59.561 43.478 0.00 0.00 0.00 3.02
2864 6965 4.437390 GGCACATATCAAACGGAACAGAAG 60.437 45.833 0.00 0.00 0.00 2.85
2865 6966 4.154195 GCACATATCAAACGGAACAGAAGT 59.846 41.667 0.00 0.00 0.00 3.01
2866 6967 5.350365 GCACATATCAAACGGAACAGAAGTA 59.650 40.000 0.00 0.00 0.00 2.24
2875 6976 3.190874 CGGAACAGAAGTAGCAATCTCC 58.809 50.000 0.00 0.00 0.00 3.71
2897 6998 0.108520 GTGCCTGTTCATGCATTGGG 60.109 55.000 0.00 0.00 40.07 4.12
2917 7018 4.058721 GGCACCTCTTGATTGTTTGTTT 57.941 40.909 0.00 0.00 0.00 2.83
2969 7070 9.772973 TGACATTAAGAAAAGTAGCTCTAAACA 57.227 29.630 0.00 0.00 0.00 2.83
2975 7076 3.887621 AAGTAGCTCTAAACATCGGCA 57.112 42.857 0.00 0.00 0.00 5.69
2976 7077 4.408182 AAGTAGCTCTAAACATCGGCAT 57.592 40.909 0.00 0.00 0.00 4.40
2978 7079 4.122776 AGTAGCTCTAAACATCGGCATTG 58.877 43.478 0.00 0.00 0.00 2.82
2979 7080 2.991250 AGCTCTAAACATCGGCATTGT 58.009 42.857 0.00 0.00 0.00 2.71
2980 7081 4.137116 AGCTCTAAACATCGGCATTGTA 57.863 40.909 0.00 0.00 0.00 2.41
2981 7082 3.871594 AGCTCTAAACATCGGCATTGTAC 59.128 43.478 0.00 0.00 0.00 2.90
2982 7083 3.621268 GCTCTAAACATCGGCATTGTACA 59.379 43.478 0.00 0.00 0.00 2.90
2984 7085 2.919666 AAACATCGGCATTGTACAGC 57.080 45.000 0.00 0.00 0.00 4.40
2992 7093 1.462616 GCATTGTACAGCCACATGGA 58.537 50.000 0.87 0.00 37.39 3.41
2993 7094 1.133025 GCATTGTACAGCCACATGGAC 59.867 52.381 0.87 0.00 37.39 4.02
3018 7575 3.127895 CGTTGAACAAAGTGGACCAGAAA 59.872 43.478 0.00 0.00 0.00 2.52
3060 7617 7.327975 ACAAACACTATATACTTACTGCAGCA 58.672 34.615 15.27 0.00 0.00 4.41
3173 7730 5.742926 GGTAATGAAACGAGTACTCTGCTAC 59.257 44.000 20.34 10.96 0.00 3.58
3179 7736 4.803098 ACGAGTACTCTGCTACCATTTT 57.197 40.909 20.34 0.00 0.00 1.82
3257 7814 1.134371 GGTCGGATCCTCTTGAAAGGG 60.134 57.143 10.75 0.00 37.02 3.95
3402 8010 1.886542 CAGGGGAAAGTAACAACAGCC 59.113 52.381 0.00 0.00 0.00 4.85
3438 8046 7.630082 TCTATTGCAAGGATAACTAACAACCT 58.370 34.615 4.94 0.00 29.95 3.50
3441 8049 5.172934 TGCAAGGATAACTAACAACCTACG 58.827 41.667 0.00 0.00 0.00 3.51
3459 8067 1.775459 ACGTATCCTGAGCTCCTAGGA 59.225 52.381 21.59 21.59 46.43 2.94
3471 8079 2.424956 GCTCCTAGGATTGCAAACTTGG 59.575 50.000 13.12 20.91 0.00 3.61
3484 8092 0.250597 AACTTGGGGCCGTAACAGAC 60.251 55.000 0.00 0.00 0.00 3.51
3485 8093 1.373435 CTTGGGGCCGTAACAGACA 59.627 57.895 0.00 0.00 0.00 3.41
3503 8111 3.192422 AGACATTCCTCTCTGTGTTCTCG 59.808 47.826 0.00 0.00 0.00 4.04
3518 8126 7.655732 TCTGTGTTCTCGTCTAAATTTGATTGA 59.344 33.333 0.00 0.00 0.00 2.57
3597 8206 5.354767 CAGATCATGAGCTTAGCACTTGTA 58.645 41.667 11.61 0.38 0.00 2.41
3653 8262 7.092716 GTGGTTTGTGCTCTCATTGAAATATT 58.907 34.615 0.00 0.00 0.00 1.28
3676 8286 2.158813 ACGTGGTGGTCTGATTGTTCTT 60.159 45.455 0.00 0.00 0.00 2.52
3734 8349 8.316640 AGTATCATTCTGTGAAAGTTCTTGTC 57.683 34.615 0.00 0.00 40.97 3.18
3753 8368 4.482386 TGTCACGAAATTACTTCTCCTCG 58.518 43.478 0.00 0.00 31.20 4.63
3795 8410 5.182487 TGTATGCTATGTTTTCACGGTGAT 58.818 37.500 12.26 0.00 0.00 3.06
3796 8411 6.342111 TGTATGCTATGTTTTCACGGTGATA 58.658 36.000 12.26 4.23 0.00 2.15
3797 8412 6.989759 TGTATGCTATGTTTTCACGGTGATAT 59.010 34.615 12.26 7.19 0.00 1.63
3816 8431 9.294030 GGTGATATTTCTTTCTTAAGCAACATG 57.706 33.333 0.00 0.00 0.00 3.21
3822 8437 8.770438 TTTCTTTCTTAAGCAACATGTTTTGT 57.230 26.923 8.77 0.00 41.53 2.83
3831 8446 4.507388 AGCAACATGTTTTGTTTGATTCCG 59.493 37.500 8.77 0.00 46.51 4.30
3845 8460 2.492881 TGATTCCGTGCTTGATTTGCAT 59.507 40.909 0.00 0.00 42.69 3.96
3847 8462 0.447406 TCCGTGCTTGATTTGCATCG 59.553 50.000 0.00 0.00 42.69 3.84
4120 8740 7.864379 GGCATATCACATATGGAAGAAAACAAG 59.136 37.037 7.80 0.00 42.23 3.16
4121 8741 7.864379 GCATATCACATATGGAAGAAAACAAGG 59.136 37.037 7.80 0.00 42.23 3.61
4173 8793 7.920160 TTTCAAACTTTGCTTTCTTTCCATT 57.080 28.000 0.00 0.00 0.00 3.16
4224 8844 9.806448 ATGTATATTTAACCCATGACTTGCATA 57.194 29.630 0.00 0.00 34.82 3.14
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 1.003262 CGGTAGCGACGGACGAAAAA 61.003 55.000 9.07 0.00 45.77 1.94
7 8 1.442520 CGGTAGCGACGGACGAAAA 60.443 57.895 9.07 0.00 45.77 2.29
8 9 1.647545 ATCGGTAGCGACGGACGAAA 61.648 55.000 20.66 0.00 45.77 3.46
9 10 2.040213 GATCGGTAGCGACGGACGAA 62.040 60.000 20.66 0.00 45.77 3.85
10 11 2.512286 ATCGGTAGCGACGGACGA 60.512 61.111 20.66 4.46 45.77 4.20
11 12 2.052414 GATCGGTAGCGACGGACG 60.052 66.667 20.66 0.00 45.66 4.79
12 13 2.052414 CGATCGGTAGCGACGGAC 60.052 66.667 20.66 10.35 37.70 4.79
13 14 3.945434 GCGATCGGTAGCGACGGA 61.945 66.667 27.41 9.52 36.35 4.69
14 15 3.950254 AGCGATCGGTAGCGACGG 61.950 66.667 27.41 20.36 36.35 4.79
15 16 2.722548 CAGCGATCGGTAGCGACG 60.723 66.667 20.66 23.14 36.35 5.12
16 17 1.654743 GTCAGCGATCGGTAGCGAC 60.655 63.158 20.66 18.54 36.35 5.19
17 18 1.374343 AAGTCAGCGATCGGTAGCGA 61.374 55.000 20.80 20.51 36.35 4.93
18 19 1.064296 AAGTCAGCGATCGGTAGCG 59.936 57.895 20.80 8.29 38.61 4.26
19 20 0.100682 TCAAGTCAGCGATCGGTAGC 59.899 55.000 20.80 15.00 0.00 3.58
20 21 1.828832 GTCAAGTCAGCGATCGGTAG 58.171 55.000 20.80 14.11 0.00 3.18
21 22 0.098200 CGTCAAGTCAGCGATCGGTA 59.902 55.000 20.80 5.96 0.00 4.02
22 23 1.154016 CGTCAAGTCAGCGATCGGT 60.154 57.895 15.21 15.21 0.00 4.69
23 24 2.508891 GCGTCAAGTCAGCGATCGG 61.509 63.158 18.30 0.48 0.00 4.18
24 25 1.142185 ATGCGTCAAGTCAGCGATCG 61.142 55.000 11.69 11.69 0.00 3.69
25 26 0.574454 GATGCGTCAAGTCAGCGATC 59.426 55.000 0.00 0.00 0.00 3.69
26 27 0.807667 GGATGCGTCAAGTCAGCGAT 60.808 55.000 8.47 0.00 0.00 4.58
27 28 1.446099 GGATGCGTCAAGTCAGCGA 60.446 57.895 8.47 0.00 0.00 4.93
28 29 2.456119 GGGATGCGTCAAGTCAGCG 61.456 63.158 8.47 0.00 0.00 5.18
29 30 1.078848 AGGGATGCGTCAAGTCAGC 60.079 57.895 8.47 0.00 0.00 4.26
30 31 0.460987 GGAGGGATGCGTCAAGTCAG 60.461 60.000 8.47 0.00 0.00 3.51
31 32 1.596934 GGAGGGATGCGTCAAGTCA 59.403 57.895 8.47 0.00 0.00 3.41
32 33 1.519455 CGGAGGGATGCGTCAAGTC 60.519 63.158 8.47 0.69 0.00 3.01
33 34 1.330655 ATCGGAGGGATGCGTCAAGT 61.331 55.000 8.47 0.00 32.92 3.16
34 35 0.598680 GATCGGAGGGATGCGTCAAG 60.599 60.000 8.47 2.68 34.82 3.02
35 36 1.441729 GATCGGAGGGATGCGTCAA 59.558 57.895 8.47 0.00 34.82 3.18
36 37 2.498941 GGATCGGAGGGATGCGTCA 61.499 63.158 8.47 0.00 34.82 4.35
37 38 2.340443 GGATCGGAGGGATGCGTC 59.660 66.667 0.00 0.00 34.82 5.19
38 39 3.234730 GGGATCGGAGGGATGCGT 61.235 66.667 0.00 0.00 43.84 5.24
39 40 2.441822 GAAGGGATCGGAGGGATGCG 62.442 65.000 0.00 0.00 43.84 4.73
40 41 1.373059 GAAGGGATCGGAGGGATGC 59.627 63.158 0.00 0.00 42.32 3.91
50 51 0.175073 AAGCCACGTACGAAGGGATC 59.825 55.000 24.41 10.31 0.00 3.36
51 52 0.175073 GAAGCCACGTACGAAGGGAT 59.825 55.000 24.41 15.73 0.00 3.85
52 53 0.896940 AGAAGCCACGTACGAAGGGA 60.897 55.000 24.41 0.00 0.00 4.20
53 54 0.458025 GAGAAGCCACGTACGAAGGG 60.458 60.000 24.41 19.87 0.00 3.95
54 55 0.526662 AGAGAAGCCACGTACGAAGG 59.473 55.000 24.41 22.65 0.00 3.46
55 56 1.467713 GGAGAGAAGCCACGTACGAAG 60.468 57.143 24.41 13.44 0.00 3.79
56 57 0.524862 GGAGAGAAGCCACGTACGAA 59.475 55.000 24.41 0.00 0.00 3.85
57 58 0.322277 AGGAGAGAAGCCACGTACGA 60.322 55.000 24.41 0.00 0.00 3.43
58 59 0.099082 GAGGAGAGAAGCCACGTACG 59.901 60.000 15.01 15.01 0.00 3.67
59 60 1.135344 GTGAGGAGAGAAGCCACGTAC 60.135 57.143 0.00 0.00 0.00 3.67
60 61 1.174783 GTGAGGAGAGAAGCCACGTA 58.825 55.000 0.00 0.00 0.00 3.57
61 62 1.867919 CGTGAGGAGAGAAGCCACGT 61.868 60.000 0.00 0.00 43.62 4.49
62 63 1.153939 CGTGAGGAGAGAAGCCACG 60.154 63.158 0.00 0.00 43.24 4.94
63 64 1.174783 TACGTGAGGAGAGAAGCCAC 58.825 55.000 0.00 0.00 0.00 5.01
64 65 2.145397 ATACGTGAGGAGAGAAGCCA 57.855 50.000 0.00 0.00 0.00 4.75
65 66 4.278669 TCAATATACGTGAGGAGAGAAGCC 59.721 45.833 0.00 0.00 0.00 4.35
81 82 6.537301 CACAAAACGGGCTTAGAGTCAATATA 59.463 38.462 0.00 0.00 0.00 0.86
82 83 5.354234 CACAAAACGGGCTTAGAGTCAATAT 59.646 40.000 0.00 0.00 0.00 1.28
107 108 1.538687 AAGGTCAGCAAGCAATGGGC 61.539 55.000 0.00 0.00 45.30 5.36
108 109 1.747355 CTAAGGTCAGCAAGCAATGGG 59.253 52.381 0.00 0.00 0.00 4.00
145 146 1.672356 GACGAGCAAGCCCACACAT 60.672 57.895 0.00 0.00 0.00 3.21
158 159 4.915704 TGTTTTTGCACTAAAAGGACGAG 58.084 39.130 0.00 0.00 39.29 4.18
160 161 6.396459 TTTTGTTTTTGCACTAAAAGGACG 57.604 33.333 0.00 0.00 39.29 4.79
168 169 8.484641 TGAATTGACATTTTGTTTTTGCACTA 57.515 26.923 0.00 0.00 0.00 2.74
191 192 2.614481 GGTCGCTAGGTGGTGAATTTGA 60.614 50.000 0.00 0.00 0.00 2.69
192 193 1.737793 GGTCGCTAGGTGGTGAATTTG 59.262 52.381 0.00 0.00 0.00 2.32
238 239 9.448438 TCTGTGATTGCATGTACTACTTTAAAT 57.552 29.630 0.00 0.00 0.00 1.40
239 240 8.840833 TCTGTGATTGCATGTACTACTTTAAA 57.159 30.769 0.00 0.00 0.00 1.52
240 241 9.448438 AATCTGTGATTGCATGTACTACTTTAA 57.552 29.630 0.00 0.00 0.00 1.52
241 242 9.448438 AAATCTGTGATTGCATGTACTACTTTA 57.552 29.630 0.00 0.00 0.00 1.85
242 243 7.928307 AATCTGTGATTGCATGTACTACTTT 57.072 32.000 0.00 0.00 0.00 2.66
243 244 7.928307 AAATCTGTGATTGCATGTACTACTT 57.072 32.000 0.00 0.00 0.00 2.24
244 245 7.928307 AAAATCTGTGATTGCATGTACTACT 57.072 32.000 0.00 0.00 0.00 2.57
297 298 9.883142 TGGAAATTAAAAAGAAACAGACACATT 57.117 25.926 0.00 0.00 0.00 2.71
360 361 9.800433 TCACGATTTCAAACATTATGCAATATT 57.200 25.926 0.00 0.00 0.00 1.28
361 362 9.800433 TTCACGATTTCAAACATTATGCAATAT 57.200 25.926 0.00 0.00 0.00 1.28
362 363 9.800433 ATTCACGATTTCAAACATTATGCAATA 57.200 25.926 0.00 0.00 0.00 1.90
363 364 8.706492 ATTCACGATTTCAAACATTATGCAAT 57.294 26.923 0.00 0.00 0.00 3.56
364 365 9.631452 TTATTCACGATTTCAAACATTATGCAA 57.369 25.926 0.00 0.00 0.00 4.08
365 366 9.631452 TTTATTCACGATTTCAAACATTATGCA 57.369 25.926 0.00 0.00 0.00 3.96
381 382 9.574458 TGTTTGAACTTGAAAATTTATTCACGA 57.426 25.926 4.01 0.00 38.95 4.35
395 396 9.549078 AGGTTTTAAAAGTTTGTTTGAACTTGA 57.451 25.926 0.00 0.00 46.23 3.02
396 397 9.592720 CAGGTTTTAAAAGTTTGTTTGAACTTG 57.407 29.630 0.00 0.00 46.23 3.16
398 399 9.549078 TTCAGGTTTTAAAAGTTTGTTTGAACT 57.451 25.926 0.00 0.00 41.44 3.01
399 400 9.588774 GTTCAGGTTTTAAAAGTTTGTTTGAAC 57.411 29.630 0.00 9.55 34.73 3.18
400 401 9.326413 TGTTCAGGTTTTAAAAGTTTGTTTGAA 57.674 25.926 0.00 2.23 0.00 2.69
401 402 8.888579 TGTTCAGGTTTTAAAAGTTTGTTTGA 57.111 26.923 0.00 0.00 0.00 2.69
408 409 8.735315 CCCAAAATTGTTCAGGTTTTAAAAGTT 58.265 29.630 0.00 0.00 0.00 2.66
409 410 8.103935 TCCCAAAATTGTTCAGGTTTTAAAAGT 58.896 29.630 0.00 0.00 0.00 2.66
410 411 8.394877 GTCCCAAAATTGTTCAGGTTTTAAAAG 58.605 33.333 0.00 0.00 0.00 2.27
411 412 7.883311 TGTCCCAAAATTGTTCAGGTTTTAAAA 59.117 29.630 0.00 0.00 0.00 1.52
412 413 7.394816 TGTCCCAAAATTGTTCAGGTTTTAAA 58.605 30.769 0.00 0.00 0.00 1.52
413 414 6.947464 TGTCCCAAAATTGTTCAGGTTTTAA 58.053 32.000 0.00 0.00 0.00 1.52
414 415 6.546428 TGTCCCAAAATTGTTCAGGTTTTA 57.454 33.333 0.00 0.00 0.00 1.52
415 416 5.428184 TGTCCCAAAATTGTTCAGGTTTT 57.572 34.783 0.00 0.00 0.00 2.43
416 417 5.182487 GTTGTCCCAAAATTGTTCAGGTTT 58.818 37.500 0.00 0.00 0.00 3.27
417 418 4.223923 TGTTGTCCCAAAATTGTTCAGGTT 59.776 37.500 0.00 0.00 0.00 3.50
418 419 3.772025 TGTTGTCCCAAAATTGTTCAGGT 59.228 39.130 0.00 0.00 0.00 4.00
419 420 4.399004 TGTTGTCCCAAAATTGTTCAGG 57.601 40.909 0.00 0.00 0.00 3.86
420 421 5.599732 TCATGTTGTCCCAAAATTGTTCAG 58.400 37.500 0.00 0.00 0.00 3.02
421 422 5.604758 TCATGTTGTCCCAAAATTGTTCA 57.395 34.783 0.00 0.00 0.00 3.18
422 423 5.814705 TGTTCATGTTGTCCCAAAATTGTTC 59.185 36.000 0.00 0.00 0.00 3.18
423 424 5.738909 TGTTCATGTTGTCCCAAAATTGTT 58.261 33.333 0.00 0.00 0.00 2.83
424 425 5.350504 TGTTCATGTTGTCCCAAAATTGT 57.649 34.783 0.00 0.00 0.00 2.71
425 426 6.864360 ATTGTTCATGTTGTCCCAAAATTG 57.136 33.333 0.00 0.00 0.00 2.32
426 427 9.571816 AATAATTGTTCATGTTGTCCCAAAATT 57.428 25.926 0.00 0.00 0.00 1.82
427 428 9.571816 AAATAATTGTTCATGTTGTCCCAAAAT 57.428 25.926 0.00 0.00 0.00 1.82
428 429 8.970859 AAATAATTGTTCATGTTGTCCCAAAA 57.029 26.923 0.00 0.00 0.00 2.44
569 570 9.797642 AGTGGATTCAAATATGTTCAGCATATA 57.202 29.630 0.00 0.00 46.84 0.86
571 572 8.523915 AAGTGGATTCAAATATGTTCAGCATA 57.476 30.769 0.00 0.00 43.47 3.14
572 573 7.414222 AAGTGGATTCAAATATGTTCAGCAT 57.586 32.000 0.00 0.00 41.42 3.79
573 574 6.839124 AAGTGGATTCAAATATGTTCAGCA 57.161 33.333 0.00 0.00 0.00 4.41
574 575 7.315142 TCAAAGTGGATTCAAATATGTTCAGC 58.685 34.615 0.00 0.00 0.00 4.26
575 576 9.132521 GTTCAAAGTGGATTCAAATATGTTCAG 57.867 33.333 0.00 0.00 0.00 3.02
576 577 8.637099 TGTTCAAAGTGGATTCAAATATGTTCA 58.363 29.630 0.00 0.00 0.00 3.18
577 578 9.474920 TTGTTCAAAGTGGATTCAAATATGTTC 57.525 29.630 0.00 0.00 0.00 3.18
615 616 9.567848 CAGTGTAAACTACAAAATGTTCACTTT 57.432 29.630 0.00 0.00 40.93 2.66
616 617 8.952278 TCAGTGTAAACTACAAAATGTTCACTT 58.048 29.630 0.00 0.00 40.93 3.16
617 618 8.500753 TCAGTGTAAACTACAAAATGTTCACT 57.499 30.769 0.00 0.00 40.93 3.41
618 619 9.730420 ATTCAGTGTAAACTACAAAATGTTCAC 57.270 29.630 0.00 0.00 40.93 3.18
655 656 9.304731 GTTCAAGGTATATATGTTCAACGTGTA 57.695 33.333 0.00 0.00 0.00 2.90
656 657 7.820386 TGTTCAAGGTATATATGTTCAACGTGT 59.180 33.333 0.00 0.00 0.00 4.49
657 658 8.192068 TGTTCAAGGTATATATGTTCAACGTG 57.808 34.615 0.00 0.00 0.00 4.49
658 659 8.780846 TTGTTCAAGGTATATATGTTCAACGT 57.219 30.769 0.00 0.00 0.00 3.99
693 694 9.497030 GCGTATATCACAAAATGTTCAATGTAA 57.503 29.630 0.00 0.00 0.00 2.41
694 695 8.888716 AGCGTATATCACAAAATGTTCAATGTA 58.111 29.630 0.00 0.00 0.00 2.29
695 696 7.697710 CAGCGTATATCACAAAATGTTCAATGT 59.302 33.333 0.00 0.00 0.00 2.71
696 697 7.305590 GCAGCGTATATCACAAAATGTTCAATG 60.306 37.037 0.00 0.00 0.00 2.82
697 698 6.692681 GCAGCGTATATCACAAAATGTTCAAT 59.307 34.615 0.00 0.00 0.00 2.57
698 699 6.027131 GCAGCGTATATCACAAAATGTTCAA 58.973 36.000 0.00 0.00 0.00 2.69
699 700 5.123027 TGCAGCGTATATCACAAAATGTTCA 59.877 36.000 0.00 0.00 0.00 3.18
700 701 5.452302 GTGCAGCGTATATCACAAAATGTTC 59.548 40.000 0.00 0.00 0.00 3.18
701 702 5.106357 TGTGCAGCGTATATCACAAAATGTT 60.106 36.000 0.00 0.00 36.62 2.71
702 703 4.394610 TGTGCAGCGTATATCACAAAATGT 59.605 37.500 0.00 0.00 36.62 2.71
703 704 4.907579 TGTGCAGCGTATATCACAAAATG 58.092 39.130 0.00 0.00 36.62 2.32
704 705 5.559427 TTGTGCAGCGTATATCACAAAAT 57.441 34.783 4.42 0.00 43.71 1.82
707 708 5.559427 AATTTGTGCAGCGTATATCACAA 57.441 34.783 2.93 2.93 44.60 3.33
708 709 5.331098 CAAATTTGTGCAGCGTATATCACA 58.669 37.500 10.15 0.00 37.63 3.58
709 710 4.734854 CCAAATTTGTGCAGCGTATATCAC 59.265 41.667 16.73 0.00 0.00 3.06
710 711 4.637977 TCCAAATTTGTGCAGCGTATATCA 59.362 37.500 16.73 0.00 0.00 2.15
711 712 5.007626 TCTCCAAATTTGTGCAGCGTATATC 59.992 40.000 16.73 0.00 0.00 1.63
712 713 4.881273 TCTCCAAATTTGTGCAGCGTATAT 59.119 37.500 16.73 0.00 0.00 0.86
713 714 4.257731 TCTCCAAATTTGTGCAGCGTATA 58.742 39.130 16.73 0.00 0.00 1.47
714 715 3.081061 TCTCCAAATTTGTGCAGCGTAT 58.919 40.909 16.73 0.00 0.00 3.06
715 716 2.499197 TCTCCAAATTTGTGCAGCGTA 58.501 42.857 16.73 0.00 0.00 4.42
716 717 1.317613 TCTCCAAATTTGTGCAGCGT 58.682 45.000 16.73 0.00 0.00 5.07
717 718 2.256174 CATCTCCAAATTTGTGCAGCG 58.744 47.619 16.73 0.81 0.00 5.18
718 719 1.997606 GCATCTCCAAATTTGTGCAGC 59.002 47.619 20.54 12.85 33.09 5.25
719 720 3.306917 TGCATCTCCAAATTTGTGCAG 57.693 42.857 22.96 13.69 37.63 4.41
720 721 3.747854 TTGCATCTCCAAATTTGTGCA 57.252 38.095 22.96 22.96 40.42 4.57
721 722 3.808726 TGTTTGCATCTCCAAATTTGTGC 59.191 39.130 19.30 19.30 37.09 4.57
722 723 5.987777 TTGTTTGCATCTCCAAATTTGTG 57.012 34.783 16.73 9.41 37.09 3.33
723 724 7.282675 TCAATTTGTTTGCATCTCCAAATTTGT 59.717 29.630 16.73 0.00 41.99 2.83
724 725 7.640852 TCAATTTGTTTGCATCTCCAAATTTG 58.359 30.769 11.40 11.40 41.99 2.32
725 726 7.804843 TCAATTTGTTTGCATCTCCAAATTT 57.195 28.000 16.75 0.00 41.99 1.82
726 727 7.804843 TTCAATTTGTTTGCATCTCCAAATT 57.195 28.000 14.94 14.94 44.18 1.82
727 728 7.499895 ACTTTCAATTTGTTTGCATCTCCAAAT 59.500 29.630 0.00 0.00 38.72 2.32
728 729 6.822676 ACTTTCAATTTGTTTGCATCTCCAAA 59.177 30.769 0.00 0.00 35.16 3.28
729 730 6.258287 CACTTTCAATTTGTTTGCATCTCCAA 59.742 34.615 0.00 0.00 35.16 3.53
730 731 5.754406 CACTTTCAATTTGTTTGCATCTCCA 59.246 36.000 0.00 0.00 35.16 3.86
731 732 5.984926 TCACTTTCAATTTGTTTGCATCTCC 59.015 36.000 0.00 0.00 35.16 3.71
732 733 7.010367 TGTTCACTTTCAATTTGTTTGCATCTC 59.990 33.333 0.00 0.00 35.16 2.75
733 734 6.817641 TGTTCACTTTCAATTTGTTTGCATCT 59.182 30.769 0.00 0.00 35.16 2.90
734 735 7.002816 TGTTCACTTTCAATTTGTTTGCATC 57.997 32.000 0.00 0.00 35.16 3.91
735 736 6.981762 TGTTCACTTTCAATTTGTTTGCAT 57.018 29.167 0.00 0.00 35.16 3.96
736 737 6.791887 TTGTTCACTTTCAATTTGTTTGCA 57.208 29.167 0.00 0.00 35.16 4.08
737 738 8.672214 ATTTTGTTCACTTTCAATTTGTTTGC 57.328 26.923 0.00 0.00 35.16 3.68
747 748 9.487790 ACTCTTTCAAAATTTTGTTCACTTTCA 57.512 25.926 25.98 5.15 39.18 2.69
752 753 9.967245 GGTTAACTCTTTCAAAATTTTGTTCAC 57.033 29.630 25.98 14.81 39.18 3.18
753 754 9.157104 GGGTTAACTCTTTCAAAATTTTGTTCA 57.843 29.630 25.98 11.99 39.18 3.18
754 755 9.378551 AGGGTTAACTCTTTCAAAATTTTGTTC 57.621 29.630 25.98 5.64 39.18 3.18
755 756 9.733556 AAGGGTTAACTCTTTCAAAATTTTGTT 57.266 25.926 25.98 16.08 39.18 2.83
756 757 9.733556 AAAGGGTTAACTCTTTCAAAATTTTGT 57.266 25.926 24.78 11.00 39.18 2.83
759 760 9.093970 CGAAAAGGGTTAACTCTTTCAAAATTT 57.906 29.630 29.06 14.80 32.68 1.82
760 761 7.709182 CCGAAAAGGGTTAACTCTTTCAAAATT 59.291 33.333 29.06 15.46 32.68 1.82
761 762 7.068962 TCCGAAAAGGGTTAACTCTTTCAAAAT 59.931 33.333 29.06 16.12 41.52 1.82
762 763 6.377712 TCCGAAAAGGGTTAACTCTTTCAAAA 59.622 34.615 29.06 15.23 41.52 2.44
763 764 5.887035 TCCGAAAAGGGTTAACTCTTTCAAA 59.113 36.000 29.06 14.93 41.52 2.69
764 765 5.438833 TCCGAAAAGGGTTAACTCTTTCAA 58.561 37.500 29.06 14.64 41.52 2.69
765 766 5.038651 TCCGAAAAGGGTTAACTCTTTCA 57.961 39.130 29.06 13.76 41.52 2.69
766 767 6.183360 TGTTTCCGAAAAGGGTTAACTCTTTC 60.183 38.462 29.06 21.08 41.52 2.62
767 768 5.653330 TGTTTCCGAAAAGGGTTAACTCTTT 59.347 36.000 24.78 24.78 41.52 2.52
768 769 5.195185 TGTTTCCGAAAAGGGTTAACTCTT 58.805 37.500 15.22 15.22 41.52 2.85
769 770 4.784177 TGTTTCCGAAAAGGGTTAACTCT 58.216 39.130 0.85 0.85 41.52 3.24
770 771 5.297527 TCTTGTTTCCGAAAAGGGTTAACTC 59.702 40.000 5.42 0.21 41.52 3.01
771 772 5.195185 TCTTGTTTCCGAAAAGGGTTAACT 58.805 37.500 5.42 0.00 41.52 2.24
772 773 5.503662 TCTTGTTTCCGAAAAGGGTTAAC 57.496 39.130 0.00 0.00 41.52 2.01
773 774 5.887035 TCTTCTTGTTTCCGAAAAGGGTTAA 59.113 36.000 0.00 0.00 41.52 2.01
774 775 5.438833 TCTTCTTGTTTCCGAAAAGGGTTA 58.561 37.500 0.00 0.00 41.52 2.85
775 776 4.274978 TCTTCTTGTTTCCGAAAAGGGTT 58.725 39.130 0.00 0.00 41.52 4.11
776 777 3.883489 CTCTTCTTGTTTCCGAAAAGGGT 59.117 43.478 0.00 0.00 41.52 4.34
777 778 3.883489 ACTCTTCTTGTTTCCGAAAAGGG 59.117 43.478 0.00 0.00 41.52 3.95
778 779 5.500645 AACTCTTCTTGTTTCCGAAAAGG 57.499 39.130 0.00 0.00 42.97 3.11
798 799 9.578439 CTCCATTGATATTCTTTTTGAGGAAAC 57.422 33.333 0.00 0.00 0.00 2.78
799 800 9.532494 TCTCCATTGATATTCTTTTTGAGGAAA 57.468 29.630 0.00 0.00 0.00 3.13
800 801 8.960591 GTCTCCATTGATATTCTTTTTGAGGAA 58.039 33.333 0.00 0.00 0.00 3.36
801 802 7.280876 CGTCTCCATTGATATTCTTTTTGAGGA 59.719 37.037 0.00 0.00 0.00 3.71
802 803 7.066284 ACGTCTCCATTGATATTCTTTTTGAGG 59.934 37.037 0.00 0.00 0.00 3.86
803 804 7.907045 CACGTCTCCATTGATATTCTTTTTGAG 59.093 37.037 0.00 0.00 0.00 3.02
804 805 7.148255 CCACGTCTCCATTGATATTCTTTTTGA 60.148 37.037 0.00 0.00 0.00 2.69
805 806 6.968904 CCACGTCTCCATTGATATTCTTTTTG 59.031 38.462 0.00 0.00 0.00 2.44
806 807 6.884295 TCCACGTCTCCATTGATATTCTTTTT 59.116 34.615 0.00 0.00 0.00 1.94
807 808 6.316390 GTCCACGTCTCCATTGATATTCTTTT 59.684 38.462 0.00 0.00 0.00 2.27
808 809 5.817816 GTCCACGTCTCCATTGATATTCTTT 59.182 40.000 0.00 0.00 0.00 2.52
809 810 5.360591 GTCCACGTCTCCATTGATATTCTT 58.639 41.667 0.00 0.00 0.00 2.52
810 811 4.202264 GGTCCACGTCTCCATTGATATTCT 60.202 45.833 0.00 0.00 0.00 2.40
811 812 4.058817 GGTCCACGTCTCCATTGATATTC 58.941 47.826 0.00 0.00 0.00 1.75
812 813 3.711704 AGGTCCACGTCTCCATTGATATT 59.288 43.478 0.00 0.00 0.00 1.28
813 814 3.070159 CAGGTCCACGTCTCCATTGATAT 59.930 47.826 0.00 0.00 0.00 1.63
814 815 2.430694 CAGGTCCACGTCTCCATTGATA 59.569 50.000 0.00 0.00 0.00 2.15
815 816 1.208052 CAGGTCCACGTCTCCATTGAT 59.792 52.381 0.00 0.00 0.00 2.57
816 817 0.608130 CAGGTCCACGTCTCCATTGA 59.392 55.000 0.00 0.00 0.00 2.57
817 818 0.321671 ACAGGTCCACGTCTCCATTG 59.678 55.000 0.00 0.00 0.00 2.82
818 819 1.056660 AACAGGTCCACGTCTCCATT 58.943 50.000 0.00 0.00 0.00 3.16
819 820 1.825474 CTAACAGGTCCACGTCTCCAT 59.175 52.381 0.00 0.00 0.00 3.41
820 821 1.254026 CTAACAGGTCCACGTCTCCA 58.746 55.000 0.00 0.00 0.00 3.86
821 822 0.531200 CCTAACAGGTCCACGTCTCC 59.469 60.000 0.00 0.00 0.00 3.71
822 823 1.473278 CTCCTAACAGGTCCACGTCTC 59.527 57.143 0.00 0.00 36.53 3.36
823 824 1.203025 ACTCCTAACAGGTCCACGTCT 60.203 52.381 0.00 0.00 36.53 4.18
824 825 1.201880 GACTCCTAACAGGTCCACGTC 59.798 57.143 0.00 0.00 36.53 4.34
825 826 1.203025 AGACTCCTAACAGGTCCACGT 60.203 52.381 0.00 0.00 36.53 4.49
826 827 1.546961 AGACTCCTAACAGGTCCACG 58.453 55.000 0.00 0.00 36.53 4.94
827 828 2.234168 GGAAGACTCCTAACAGGTCCAC 59.766 54.545 0.00 0.00 38.88 4.02
828 829 2.537143 GGAAGACTCCTAACAGGTCCA 58.463 52.381 0.00 0.00 38.88 4.02
829 830 1.477295 CGGAAGACTCCTAACAGGTCC 59.523 57.143 0.00 0.00 39.93 4.46
830 831 1.477295 CCGGAAGACTCCTAACAGGTC 59.523 57.143 0.00 0.00 39.93 3.85
831 832 1.558233 CCGGAAGACTCCTAACAGGT 58.442 55.000 0.00 0.00 39.93 4.00
832 833 0.175989 GCCGGAAGACTCCTAACAGG 59.824 60.000 5.05 0.00 39.93 4.00
833 834 0.175989 GGCCGGAAGACTCCTAACAG 59.824 60.000 5.05 0.00 39.93 3.16
834 835 1.262640 GGGCCGGAAGACTCCTAACA 61.263 60.000 5.05 0.00 39.93 2.41
835 836 1.521141 GGGCCGGAAGACTCCTAAC 59.479 63.158 5.05 0.00 39.93 2.34
836 837 2.056223 CGGGCCGGAAGACTCCTAA 61.056 63.158 20.56 0.00 39.93 2.69
837 838 2.441532 CGGGCCGGAAGACTCCTA 60.442 66.667 20.56 0.00 39.93 2.94
848 849 4.760047 CAAGAGTGTCCCGGGCCG 62.760 72.222 21.46 21.46 0.00 6.13
849 850 4.410400 CCAAGAGTGTCCCGGGCC 62.410 72.222 18.49 4.39 0.00 5.80
851 852 3.316573 GAGCCAAGAGTGTCCCGGG 62.317 68.421 16.85 16.85 0.00 5.73
852 853 2.266055 GAGCCAAGAGTGTCCCGG 59.734 66.667 0.00 0.00 0.00 5.73
853 854 1.079543 CAGAGCCAAGAGTGTCCCG 60.080 63.158 0.00 0.00 0.00 5.14
854 855 1.376553 GCAGAGCCAAGAGTGTCCC 60.377 63.158 0.00 0.00 0.00 4.46
855 856 0.390998 GAGCAGAGCCAAGAGTGTCC 60.391 60.000 0.00 0.00 0.00 4.02
856 857 0.735632 CGAGCAGAGCCAAGAGTGTC 60.736 60.000 0.00 0.00 0.00 3.67
857 858 1.291588 CGAGCAGAGCCAAGAGTGT 59.708 57.895 0.00 0.00 0.00 3.55
858 859 1.013005 CACGAGCAGAGCCAAGAGTG 61.013 60.000 0.00 0.00 0.00 3.51
859 860 1.291588 CACGAGCAGAGCCAAGAGT 59.708 57.895 0.00 0.00 0.00 3.24
860 861 0.320247 AACACGAGCAGAGCCAAGAG 60.320 55.000 0.00 0.00 0.00 2.85
861 862 0.319900 GAACACGAGCAGAGCCAAGA 60.320 55.000 0.00 0.00 0.00 3.02
862 863 0.320247 AGAACACGAGCAGAGCCAAG 60.320 55.000 0.00 0.00 0.00 3.61
863 864 0.601046 CAGAACACGAGCAGAGCCAA 60.601 55.000 0.00 0.00 0.00 4.52
864 865 1.005748 CAGAACACGAGCAGAGCCA 60.006 57.895 0.00 0.00 0.00 4.75
865 866 1.011451 GTCAGAACACGAGCAGAGCC 61.011 60.000 0.00 0.00 0.00 4.70
866 867 0.038709 AGTCAGAACACGAGCAGAGC 60.039 55.000 0.00 0.00 0.00 4.09
867 868 1.727535 CGAGTCAGAACACGAGCAGAG 60.728 57.143 0.00 0.00 41.28 3.35
868 869 0.238553 CGAGTCAGAACACGAGCAGA 59.761 55.000 0.00 0.00 41.28 4.26
869 870 0.238553 TCGAGTCAGAACACGAGCAG 59.761 55.000 0.00 0.00 42.35 4.24
870 871 0.040336 GTCGAGTCAGAACACGAGCA 60.040 55.000 0.00 0.00 46.64 4.26
871 872 0.238817 AGTCGAGTCAGAACACGAGC 59.761 55.000 0.00 0.00 46.64 5.03
872 873 2.031944 TGAAGTCGAGTCAGAACACGAG 60.032 50.000 0.00 0.00 46.64 4.18
873 874 1.944709 TGAAGTCGAGTCAGAACACGA 59.055 47.619 0.00 0.00 44.46 4.35
874 875 2.401017 TGAAGTCGAGTCAGAACACG 57.599 50.000 0.00 0.00 40.31 4.49
875 876 3.057174 AGGATGAAGTCGAGTCAGAACAC 60.057 47.826 5.11 0.00 0.00 3.32
876 877 3.157881 AGGATGAAGTCGAGTCAGAACA 58.842 45.455 5.11 0.00 0.00 3.18
877 878 3.428316 GGAGGATGAAGTCGAGTCAGAAC 60.428 52.174 5.11 0.00 0.00 3.01
878 879 2.755655 GGAGGATGAAGTCGAGTCAGAA 59.244 50.000 5.11 0.00 0.00 3.02
879 880 2.025793 AGGAGGATGAAGTCGAGTCAGA 60.026 50.000 5.11 0.00 0.00 3.27
880 881 2.098934 CAGGAGGATGAAGTCGAGTCAG 59.901 54.545 5.11 0.00 0.00 3.51
881 882 2.095461 CAGGAGGATGAAGTCGAGTCA 58.905 52.381 0.00 0.00 0.00 3.41
882 883 1.407258 CCAGGAGGATGAAGTCGAGTC 59.593 57.143 0.00 0.00 36.89 3.36
883 884 1.006043 TCCAGGAGGATGAAGTCGAGT 59.994 52.381 0.00 0.00 39.61 4.18
884 885 1.769026 TCCAGGAGGATGAAGTCGAG 58.231 55.000 0.00 0.00 39.61 4.04
885 886 1.825474 GTTCCAGGAGGATGAAGTCGA 59.175 52.381 0.00 0.00 45.26 4.20
886 887 1.827969 AGTTCCAGGAGGATGAAGTCG 59.172 52.381 0.00 0.00 45.26 4.18
887 888 2.093235 CCAGTTCCAGGAGGATGAAGTC 60.093 54.545 0.00 0.00 45.26 3.01
888 889 1.912043 CCAGTTCCAGGAGGATGAAGT 59.088 52.381 0.00 0.00 45.26 3.01
889 890 2.191400 TCCAGTTCCAGGAGGATGAAG 58.809 52.381 0.00 0.00 45.26 3.02
890 891 2.342406 TCCAGTTCCAGGAGGATGAA 57.658 50.000 0.00 0.00 45.26 2.57
891 892 2.191400 CTTCCAGTTCCAGGAGGATGA 58.809 52.381 3.93 0.00 45.26 2.92
892 893 1.407989 GCTTCCAGTTCCAGGAGGATG 60.408 57.143 0.00 1.55 45.26 3.51
893 894 0.915364 GCTTCCAGTTCCAGGAGGAT 59.085 55.000 0.00 0.00 45.26 3.24
894 895 0.473694 TGCTTCCAGTTCCAGGAGGA 60.474 55.000 0.00 0.00 43.93 3.71
905 906 0.662374 CGTGCTTTGCTTGCTTCCAG 60.662 55.000 0.00 0.00 0.00 3.86
917 918 2.942641 GGAAACCCTAGCGTGCTTT 58.057 52.632 0.00 0.00 0.00 3.51
1087 1168 0.553333 GGAAAGAATGGGGGAGGAGG 59.447 60.000 0.00 0.00 0.00 4.30
1093 1174 1.032114 GCACGAGGAAAGAATGGGGG 61.032 60.000 0.00 0.00 0.00 5.40
1098 1179 1.078759 CGCGAGCACGAGGAAAGAAT 61.079 55.000 8.01 0.00 42.66 2.40
1135 1220 4.814294 CTCGGGCGGAGGAAACGG 62.814 72.222 13.81 0.00 39.22 4.44
1228 1335 2.938956 AATCCCCAGCGGAATTAGAG 57.061 50.000 0.00 0.00 46.47 2.43
1236 1343 7.857734 AAAATAAAATAAAAATCCCCAGCGG 57.142 32.000 0.00 0.00 0.00 5.52
1253 1360 5.471257 GGCACAAACACGGGATAAAATAAA 58.529 37.500 0.00 0.00 0.00 1.40
1254 1361 4.379603 CGGCACAAACACGGGATAAAATAA 60.380 41.667 0.00 0.00 0.00 1.40
1256 1363 2.094957 CGGCACAAACACGGGATAAAAT 60.095 45.455 0.00 0.00 0.00 1.82
1257 1364 1.267261 CGGCACAAACACGGGATAAAA 59.733 47.619 0.00 0.00 0.00 1.52
1258 1365 0.875728 CGGCACAAACACGGGATAAA 59.124 50.000 0.00 0.00 0.00 1.40
1259 1366 0.956410 CCGGCACAAACACGGGATAA 60.956 55.000 0.00 0.00 43.69 1.75
1260 1367 1.376166 CCGGCACAAACACGGGATA 60.376 57.895 0.00 0.00 43.69 2.59
1261 1368 2.671619 CCGGCACAAACACGGGAT 60.672 61.111 0.00 0.00 43.69 3.85
1265 1372 2.935955 GTCTCCGGCACAAACACG 59.064 61.111 0.00 0.00 0.00 4.49
1266 1373 0.949105 ATCGTCTCCGGCACAAACAC 60.949 55.000 0.00 0.00 33.95 3.32
1267 1374 0.669318 GATCGTCTCCGGCACAAACA 60.669 55.000 0.00 0.00 33.95 2.83
1268 1375 1.359459 GGATCGTCTCCGGCACAAAC 61.359 60.000 0.00 0.00 33.29 2.93
1272 1379 3.148279 AGGGATCGTCTCCGGCAC 61.148 66.667 0.00 0.00 46.01 5.01
1275 1382 2.442272 ACCAGGGATCGTCTCCGG 60.442 66.667 0.00 0.00 46.01 5.14
1276 1383 2.786495 CCACCAGGGATCGTCTCCG 61.786 68.421 0.00 0.00 46.01 4.63
1283 1390 2.044946 GCACCACCACCAGGGATC 60.045 66.667 0.00 0.00 41.15 3.36
1284 1391 3.661648 GGCACCACCACCAGGGAT 61.662 66.667 0.00 0.00 41.15 3.85
1288 1395 3.783362 TTTCCGGCACCACCACCAG 62.783 63.158 0.00 0.00 39.03 4.00
1356 1463 0.108424 CAAGCTCACTCTTCCTCCCG 60.108 60.000 0.00 0.00 0.00 5.14
1386 1493 1.531128 TGCAGAGCAACAATGGCCA 60.531 52.632 8.56 8.56 34.76 5.36
1387 1494 1.080298 GTGCAGAGCAACAATGGCC 60.080 57.895 0.00 0.00 41.47 5.36
1421 1528 8.943002 GCAACAAAATACTAGTAGTACCACATT 58.057 33.333 12.25 1.09 32.84 2.71
1422 1529 7.277098 CGCAACAAAATACTAGTAGTACCACAT 59.723 37.037 12.25 0.00 32.84 3.21
1425 1532 6.101332 CCGCAACAAAATACTAGTAGTACCA 58.899 40.000 12.25 0.00 32.84 3.25
1426 1533 5.006068 GCCGCAACAAAATACTAGTAGTACC 59.994 44.000 12.25 0.00 32.84 3.34
1428 1535 5.111293 GGCCGCAACAAAATACTAGTAGTA 58.889 41.667 12.38 12.38 34.82 1.82
1429 1536 3.937079 GGCCGCAACAAAATACTAGTAGT 59.063 43.478 8.85 8.14 0.00 2.73
1430 1537 3.936453 TGGCCGCAACAAAATACTAGTAG 59.064 43.478 8.85 0.00 0.00 2.57
1448 1555 0.679640 TTTCATCCGTCCATGTGGCC 60.680 55.000 0.00 0.00 34.44 5.36
1474 1591 4.464008 AGCAAAATTCAAGACAGGAGTGA 58.536 39.130 0.00 0.00 0.00 3.41
1495 1612 6.550938 TTATATCTCCTCATGTGGCCATAG 57.449 41.667 9.72 4.44 0.00 2.23
1515 1632 6.630188 GCCTGCCAGTTCCACATTTTTATTAT 60.630 38.462 0.00 0.00 0.00 1.28
1534 1651 1.767759 AACCTACATTCATGCCTGCC 58.232 50.000 0.00 0.00 0.00 4.85
1544 1661 6.570378 GCAAGACAACTGCAATAACCTACATT 60.570 38.462 0.00 0.00 0.00 2.71
1546 1663 4.215399 GCAAGACAACTGCAATAACCTACA 59.785 41.667 0.00 0.00 0.00 2.74
2067 5216 4.408182 TGCTAGGGAAGAAGATACAAGC 57.592 45.455 0.00 0.00 0.00 4.01
2826 6927 7.435305 TGATATGTGCCAAATTGGATTACATG 58.565 34.615 25.84 0.00 40.96 3.21
2827 6928 7.600231 TGATATGTGCCAAATTGGATTACAT 57.400 32.000 23.26 23.26 40.96 2.29
2828 6929 7.415592 TTGATATGTGCCAAATTGGATTACA 57.584 32.000 17.47 16.37 40.96 2.41
2829 6930 7.043458 CGTTTGATATGTGCCAAATTGGATTAC 60.043 37.037 17.47 11.33 40.96 1.89
2830 6931 6.977502 CGTTTGATATGTGCCAAATTGGATTA 59.022 34.615 17.47 0.37 40.96 1.75
2831 6932 5.811613 CGTTTGATATGTGCCAAATTGGATT 59.188 36.000 17.47 0.00 40.96 3.01
2832 6933 5.350633 CGTTTGATATGTGCCAAATTGGAT 58.649 37.500 17.47 2.95 40.96 3.41
2833 6934 4.381398 CCGTTTGATATGTGCCAAATTGGA 60.381 41.667 17.47 0.00 40.96 3.53
2834 6935 3.864583 CCGTTTGATATGTGCCAAATTGG 59.135 43.478 7.84 7.84 41.55 3.16
2835 6936 4.742417 TCCGTTTGATATGTGCCAAATTG 58.258 39.130 0.00 0.00 35.14 2.32
2836 6937 5.167845 GTTCCGTTTGATATGTGCCAAATT 58.832 37.500 0.00 0.00 35.14 1.82
2837 6938 4.219507 TGTTCCGTTTGATATGTGCCAAAT 59.780 37.500 0.00 0.00 35.14 2.32
2838 6939 3.570125 TGTTCCGTTTGATATGTGCCAAA 59.430 39.130 0.00 0.00 0.00 3.28
2839 6940 3.149981 TGTTCCGTTTGATATGTGCCAA 58.850 40.909 0.00 0.00 0.00 4.52
2840 6941 2.746904 CTGTTCCGTTTGATATGTGCCA 59.253 45.455 0.00 0.00 0.00 4.92
2841 6942 3.006940 TCTGTTCCGTTTGATATGTGCC 58.993 45.455 0.00 0.00 0.00 5.01
2842 6943 4.154195 ACTTCTGTTCCGTTTGATATGTGC 59.846 41.667 0.00 0.00 0.00 4.57
2843 6944 5.862924 ACTTCTGTTCCGTTTGATATGTG 57.137 39.130 0.00 0.00 0.00 3.21
2844 6945 5.581085 GCTACTTCTGTTCCGTTTGATATGT 59.419 40.000 0.00 0.00 0.00 2.29
2845 6946 5.580691 TGCTACTTCTGTTCCGTTTGATATG 59.419 40.000 0.00 0.00 0.00 1.78
2846 6947 5.730550 TGCTACTTCTGTTCCGTTTGATAT 58.269 37.500 0.00 0.00 0.00 1.63
2847 6948 5.142061 TGCTACTTCTGTTCCGTTTGATA 57.858 39.130 0.00 0.00 0.00 2.15
2848 6949 4.002906 TGCTACTTCTGTTCCGTTTGAT 57.997 40.909 0.00 0.00 0.00 2.57
2849 6950 3.462483 TGCTACTTCTGTTCCGTTTGA 57.538 42.857 0.00 0.00 0.00 2.69
2850 6951 4.452455 AGATTGCTACTTCTGTTCCGTTTG 59.548 41.667 0.00 0.00 0.00 2.93
2851 6952 4.642429 AGATTGCTACTTCTGTTCCGTTT 58.358 39.130 0.00 0.00 0.00 3.60
2852 6953 4.246458 GAGATTGCTACTTCTGTTCCGTT 58.754 43.478 0.00 0.00 0.00 4.44
2853 6954 3.368531 GGAGATTGCTACTTCTGTTCCGT 60.369 47.826 0.00 0.00 0.00 4.69
2854 6955 3.190874 GGAGATTGCTACTTCTGTTCCG 58.809 50.000 0.00 0.00 0.00 4.30
2855 6956 3.119101 TCGGAGATTGCTACTTCTGTTCC 60.119 47.826 0.00 0.00 0.00 3.62
2856 6957 4.109050 CTCGGAGATTGCTACTTCTGTTC 58.891 47.826 0.00 0.00 33.89 3.18
2857 6958 3.511934 ACTCGGAGATTGCTACTTCTGTT 59.488 43.478 12.86 0.00 33.89 3.16
2858 6959 3.093057 ACTCGGAGATTGCTACTTCTGT 58.907 45.455 12.86 0.00 33.89 3.41
2859 6960 3.443037 CACTCGGAGATTGCTACTTCTG 58.557 50.000 12.86 0.00 33.89 3.02
2860 6961 3.791973 CACTCGGAGATTGCTACTTCT 57.208 47.619 12.86 0.00 33.89 2.85
2875 6976 3.970721 TGCATGAACAGGCACTCG 58.029 55.556 10.00 0.00 43.66 4.18
2917 7018 3.495377 CACGTCCGTTCAATCAGGTAAAA 59.505 43.478 0.00 0.00 0.00 1.52
2920 7021 1.614903 ACACGTCCGTTCAATCAGGTA 59.385 47.619 0.00 0.00 0.00 3.08
2921 7022 0.391597 ACACGTCCGTTCAATCAGGT 59.608 50.000 0.00 0.00 0.00 4.00
2922 7023 0.790207 CACACGTCCGTTCAATCAGG 59.210 55.000 0.00 0.00 0.00 3.86
2935 7036 6.431198 ACTTTTCTTAATGTCAACACACGT 57.569 33.333 0.00 0.00 34.48 4.49
2975 7076 2.877097 TGTCCATGTGGCTGTACAAT 57.123 45.000 0.00 0.00 33.69 2.71
2976 7077 2.710377 GATGTCCATGTGGCTGTACAA 58.290 47.619 0.00 0.00 33.69 2.41
2978 7079 1.290203 CGATGTCCATGTGGCTGTAC 58.710 55.000 0.00 0.00 34.44 2.90
2979 7080 0.901827 ACGATGTCCATGTGGCTGTA 59.098 50.000 0.00 0.00 34.44 2.74
2980 7081 0.036732 AACGATGTCCATGTGGCTGT 59.963 50.000 0.00 0.00 34.44 4.40
2981 7082 0.448990 CAACGATGTCCATGTGGCTG 59.551 55.000 0.00 0.00 34.44 4.85
2982 7083 0.324614 TCAACGATGTCCATGTGGCT 59.675 50.000 0.00 0.00 34.44 4.75
2984 7085 2.150390 TGTTCAACGATGTCCATGTGG 58.850 47.619 0.00 0.00 0.00 4.17
2987 7088 4.221342 CACTTTGTTCAACGATGTCCATG 58.779 43.478 0.00 0.00 0.00 3.66
2988 7089 3.253188 CCACTTTGTTCAACGATGTCCAT 59.747 43.478 0.00 0.00 0.00 3.41
2989 7090 2.616376 CCACTTTGTTCAACGATGTCCA 59.384 45.455 0.00 0.00 0.00 4.02
2990 7091 2.875933 TCCACTTTGTTCAACGATGTCC 59.124 45.455 0.00 0.00 0.00 4.02
2991 7092 3.303791 GGTCCACTTTGTTCAACGATGTC 60.304 47.826 0.00 0.00 0.00 3.06
2992 7093 2.616842 GGTCCACTTTGTTCAACGATGT 59.383 45.455 0.00 0.00 0.00 3.06
2993 7094 2.616376 TGGTCCACTTTGTTCAACGATG 59.384 45.455 0.00 0.00 0.00 3.84
3044 7601 6.115446 ACAACACATGCTGCAGTAAGTATAT 58.885 36.000 16.64 0.42 0.00 0.86
3060 7617 4.032960 TCATCAAAGCCCTACAACACAT 57.967 40.909 0.00 0.00 0.00 3.21
3179 7736 7.915293 TCACTAGTCTGAGAACAAAACAAAA 57.085 32.000 0.00 0.00 0.00 2.44
3183 7740 7.975750 AGTTTTCACTAGTCTGAGAACAAAAC 58.024 34.615 15.06 8.51 37.60 2.43
3402 8010 3.438087 CCTTGCAATAGAACAGTCACTGG 59.562 47.826 10.28 0.00 35.51 4.00
3438 8046 2.977580 TCCTAGGAGCTCAGGATACGTA 59.022 50.000 16.86 0.00 46.39 3.57
3459 8067 0.540830 TACGGCCCCAAGTTTGCAAT 60.541 50.000 0.00 0.00 0.00 3.56
3471 8079 0.252197 AGGAATGTCTGTTACGGCCC 59.748 55.000 0.00 0.00 0.00 5.80
3484 8092 3.192422 AGACGAGAACACAGAGAGGAATG 59.808 47.826 0.00 0.00 0.00 2.67
3485 8093 3.426615 AGACGAGAACACAGAGAGGAAT 58.573 45.455 0.00 0.00 0.00 3.01
3518 8126 9.466497 TTCTCTCTGGCAAAACATATTCTATTT 57.534 29.630 0.00 0.00 0.00 1.40
3522 8130 7.718753 CCTATTCTCTCTGGCAAAACATATTCT 59.281 37.037 0.00 0.00 0.00 2.40
3523 8131 7.521261 GCCTATTCTCTCTGGCAAAACATATTC 60.521 40.741 0.00 0.00 44.34 1.75
3524 8132 6.264067 GCCTATTCTCTCTGGCAAAACATATT 59.736 38.462 0.00 0.00 44.34 1.28
3597 8206 5.994250 TCAATGCCTCTGAATTAAGCTAGT 58.006 37.500 0.00 0.00 0.00 2.57
3653 8262 3.070446 AGAACAATCAGACCACCACGTTA 59.930 43.478 0.00 0.00 0.00 3.18
3734 8349 3.846360 ACCGAGGAGAAGTAATTTCGTG 58.154 45.455 0.00 0.00 40.86 4.35
3753 8368 0.319405 AGGCAGCTGAAATGCAAACC 59.681 50.000 20.43 5.42 45.68 3.27
3796 8411 9.382275 ACAAAACATGTTGCTTAAGAAAGAAAT 57.618 25.926 12.82 0.00 40.06 2.17
3797 8412 8.770438 ACAAAACATGTTGCTTAAGAAAGAAA 57.230 26.923 12.82 0.00 40.06 2.52
3816 8431 4.109050 TCAAGCACGGAATCAAACAAAAC 58.891 39.130 0.00 0.00 0.00 2.43
3820 8435 4.297510 CAAATCAAGCACGGAATCAAACA 58.702 39.130 0.00 0.00 0.00 2.83
3821 8436 3.121778 GCAAATCAAGCACGGAATCAAAC 59.878 43.478 0.00 0.00 0.00 2.93
3822 8437 3.243670 TGCAAATCAAGCACGGAATCAAA 60.244 39.130 0.00 0.00 37.02 2.69
3831 8446 3.404978 TGCGATGCAAATCAAGCAC 57.595 47.368 0.00 0.00 45.95 4.40
3845 8460 6.966021 ACAAGAAAGCTAATTTTAAGTGCGA 58.034 32.000 0.00 0.00 0.00 5.10
3847 8462 7.007456 CGCTACAAGAAAGCTAATTTTAAGTGC 59.993 37.037 0.00 0.00 37.85 4.40
4120 8740 4.095782 TCAAGTTTGTCACAGTTTGCTACC 59.904 41.667 0.00 0.00 0.00 3.18
4121 8741 5.229921 TCAAGTTTGTCACAGTTTGCTAC 57.770 39.130 0.00 0.00 0.00 3.58
4173 8793 5.860941 TCCTTTTGTTGTTCAAATAGCCA 57.139 34.783 0.00 0.00 44.15 4.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.