Multiple sequence alignment - TraesCS6A01G085400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G085400 chr6A 100.000 3450 0 0 1 3450 53507464 53504015 0.000000e+00 6372.0
1 TraesCS6A01G085400 chr6D 90.352 1337 73 18 557 1854 43071118 43069799 0.000000e+00 1703.0
2 TraesCS6A01G085400 chr6D 94.438 809 44 1 1851 2659 43058557 43057750 0.000000e+00 1243.0
3 TraesCS6A01G085400 chr6D 93.132 364 24 1 3087 3450 43057740 43057378 1.820000e-147 532.0
4 TraesCS6A01G085400 chr6D 98.485 66 1 0 3385 3450 43054876 43054811 2.180000e-22 117.0
5 TraesCS6A01G085400 chr2A 83.254 1678 210 43 1060 2689 690927989 690929643 0.000000e+00 1476.0
6 TraesCS6A01G085400 chr2A 77.604 192 25 10 3168 3348 690930098 690930282 2.190000e-17 100.0
7 TraesCS6A01G085400 chr2B 83.145 1679 213 43 1060 2689 655011912 655010255 0.000000e+00 1469.0
8 TraesCS6A01G085400 chr2B 78.967 271 35 11 3092 3348 655010009 655009747 7.660000e-37 165.0
9 TraesCS6A01G085400 chr2D 82.944 1671 226 32 1060 2689 548082355 548080703 0.000000e+00 1452.0
10 TraesCS6A01G085400 chr2D 86.301 73 8 2 2993 3065 90523644 90523714 1.030000e-10 78.7
11 TraesCS6A01G085400 chr6B 93.142 627 39 1 2063 2689 103663970 103664592 0.000000e+00 917.0
12 TraesCS6A01G085400 chr6B 91.966 585 33 6 2863 3446 103664584 103665155 0.000000e+00 808.0
13 TraesCS6A01G085400 chr6B 91.189 488 38 5 1076 1561 103663486 103663970 0.000000e+00 658.0
14 TraesCS6A01G085400 chr6B 85.502 538 31 24 587 1080 103651209 103651743 5.100000e-143 518.0
15 TraesCS6A01G085400 chr6B 81.533 287 35 10 95 366 103577486 103577769 1.610000e-53 220.0
16 TraesCS6A01G085400 chr6B 97.727 44 1 0 2993 3036 35541453 35541410 3.690000e-10 76.8
17 TraesCS6A01G085400 chr6B 97.727 44 1 0 2993 3036 35555217 35555174 3.690000e-10 76.8
18 TraesCS6A01G085400 chr1D 88.764 178 17 2 2686 2862 435170024 435169849 7.500000e-52 215.0
19 TraesCS6A01G085400 chr7B 86.667 105 11 3 2717 2819 45211991 45211888 2.810000e-21 113.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G085400 chr6A 53504015 53507464 3449 True 6372.000000 6372 100.000000 1 3450 1 chr6A.!!$R1 3449
1 TraesCS6A01G085400 chr6D 43069799 43071118 1319 True 1703.000000 1703 90.352000 557 1854 1 chr6D.!!$R1 1297
2 TraesCS6A01G085400 chr6D 43054811 43058557 3746 True 630.666667 1243 95.351667 1851 3450 3 chr6D.!!$R2 1599
3 TraesCS6A01G085400 chr2A 690927989 690930282 2293 False 788.000000 1476 80.429000 1060 3348 2 chr2A.!!$F1 2288
4 TraesCS6A01G085400 chr2B 655009747 655011912 2165 True 817.000000 1469 81.056000 1060 3348 2 chr2B.!!$R1 2288
5 TraesCS6A01G085400 chr2D 548080703 548082355 1652 True 1452.000000 1452 82.944000 1060 2689 1 chr2D.!!$R1 1629
6 TraesCS6A01G085400 chr6B 103663486 103665155 1669 False 794.333333 917 92.099000 1076 3446 3 chr6B.!!$F3 2370
7 TraesCS6A01G085400 chr6B 103651209 103651743 534 False 518.000000 518 85.502000 587 1080 1 chr6B.!!$F2 493

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
703 705 0.252284 TTCTTCTTCGCCTCCCTCCT 60.252 55.0 0.0 0.0 0.00 3.69 F
935 990 0.369248 GGTTTCTCGTCGATTTCCGC 59.631 55.0 0.0 0.0 38.37 5.54 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1626 1729 0.043940 AGCATCCTCTCTGGGGACTT 59.956 55.0 0.00 0.00 35.51 3.01 R
2864 2987 0.171903 GATGCCACTGTGCAACCATC 59.828 55.0 1.29 7.55 45.84 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.839310 TTTGAAAACAGGAACATTTTTCTGAA 57.161 26.923 6.90 0.00 40.07 3.02
26 27 8.839310 TTGAAAACAGGAACATTTTTCTGAAA 57.161 26.923 6.90 0.00 40.07 2.69
27 28 9.447157 TTGAAAACAGGAACATTTTTCTGAAAT 57.553 25.926 6.90 0.00 40.07 2.17
28 29 9.447157 TGAAAACAGGAACATTTTTCTGAAATT 57.553 25.926 6.90 0.00 40.07 1.82
29 30 9.920826 GAAAACAGGAACATTTTTCTGAAATTC 57.079 29.630 6.90 4.87 37.93 2.17
30 31 9.671279 AAAACAGGAACATTTTTCTGAAATTCT 57.329 25.926 6.90 0.00 0.00 2.40
31 32 8.652810 AACAGGAACATTTTTCTGAAATTCTG 57.347 30.769 6.90 5.67 0.00 3.02
32 33 8.010733 ACAGGAACATTTTTCTGAAATTCTGA 57.989 30.769 6.90 0.00 0.00 3.27
33 34 8.477256 ACAGGAACATTTTTCTGAAATTCTGAA 58.523 29.630 6.90 10.59 33.44 3.02
34 35 8.758715 CAGGAACATTTTTCTGAAATTCTGAAC 58.241 33.333 13.61 2.72 34.72 3.18
35 36 7.928167 AGGAACATTTTTCTGAAATTCTGAACC 59.072 33.333 13.61 10.19 34.72 3.62
36 37 7.710475 GGAACATTTTTCTGAAATTCTGAACCA 59.290 33.333 13.61 5.40 34.72 3.67
37 38 9.097257 GAACATTTTTCTGAAATTCTGAACCAA 57.903 29.630 13.61 10.47 34.72 3.67
38 39 9.617523 AACATTTTTCTGAAATTCTGAACCAAT 57.382 25.926 13.61 11.91 34.72 3.16
39 40 9.617523 ACATTTTTCTGAAATTCTGAACCAATT 57.382 25.926 13.61 2.95 34.72 2.32
42 43 9.889128 TTTTTCTGAAATTCTGAACCAATTTCT 57.111 25.926 13.61 0.00 45.01 2.52
43 44 8.876275 TTTCTGAAATTCTGAACCAATTTCTG 57.124 30.769 13.61 14.70 45.01 3.02
44 45 7.822161 TCTGAAATTCTGAACCAATTTCTGA 57.178 32.000 16.91 16.91 45.83 3.27
52 53 7.403312 TCTGAACCAATTTCTGAAAAAGACA 57.597 32.000 6.95 3.22 38.76 3.41
53 54 7.835822 TCTGAACCAATTTCTGAAAAAGACAA 58.164 30.769 6.95 0.00 38.76 3.18
54 55 8.310382 TCTGAACCAATTTCTGAAAAAGACAAA 58.690 29.630 6.95 0.00 38.76 2.83
55 56 8.250538 TGAACCAATTTCTGAAAAAGACAAAC 57.749 30.769 6.95 0.00 33.46 2.93
56 57 7.875041 TGAACCAATTTCTGAAAAAGACAAACA 59.125 29.630 6.95 0.00 33.46 2.83
57 58 8.791327 AACCAATTTCTGAAAAAGACAAACAT 57.209 26.923 6.95 0.00 33.46 2.71
58 59 8.791327 ACCAATTTCTGAAAAAGACAAACATT 57.209 26.923 6.95 0.00 33.46 2.71
59 60 9.230122 ACCAATTTCTGAAAAAGACAAACATTT 57.770 25.926 6.95 0.00 33.46 2.32
110 111 8.759641 TGAATATGTGAACAATTTTTGAAACGG 58.240 29.630 0.00 0.00 0.00 4.44
111 112 5.982465 ATGTGAACAATTTTTGAAACGGG 57.018 34.783 0.00 0.00 0.00 5.28
112 113 5.073311 TGTGAACAATTTTTGAAACGGGA 57.927 34.783 0.00 0.00 0.00 5.14
113 114 5.479306 TGTGAACAATTTTTGAAACGGGAA 58.521 33.333 0.00 0.00 0.00 3.97
114 115 5.348997 TGTGAACAATTTTTGAAACGGGAAC 59.651 36.000 0.00 0.00 0.00 3.62
115 116 5.348997 GTGAACAATTTTTGAAACGGGAACA 59.651 36.000 0.00 0.00 0.00 3.18
116 117 6.036626 GTGAACAATTTTTGAAACGGGAACAT 59.963 34.615 0.00 0.00 0.00 2.71
117 118 6.595716 TGAACAATTTTTGAAACGGGAACATT 59.404 30.769 0.00 0.00 0.00 2.71
118 119 6.993786 ACAATTTTTGAAACGGGAACATTT 57.006 29.167 0.00 0.00 0.00 2.32
119 120 7.384439 ACAATTTTTGAAACGGGAACATTTT 57.616 28.000 0.00 0.00 0.00 1.82
120 121 7.821652 ACAATTTTTGAAACGGGAACATTTTT 58.178 26.923 0.00 0.00 0.00 1.94
121 122 7.752686 ACAATTTTTGAAACGGGAACATTTTTG 59.247 29.630 0.00 0.00 0.00 2.44
122 123 6.803154 TTTTTGAAACGGGAACATTTTTGT 57.197 29.167 0.00 0.00 0.00 2.83
123 124 7.900782 TTTTTGAAACGGGAACATTTTTGTA 57.099 28.000 0.00 0.00 0.00 2.41
124 125 7.900782 TTTTGAAACGGGAACATTTTTGTAA 57.099 28.000 0.00 0.00 0.00 2.41
125 126 7.900782 TTTGAAACGGGAACATTTTTGTAAA 57.099 28.000 0.00 0.00 0.00 2.01
126 127 8.494016 TTTGAAACGGGAACATTTTTGTAAAT 57.506 26.923 0.00 0.00 34.29 1.40
127 128 7.701809 TGAAACGGGAACATTTTTGTAAATC 57.298 32.000 0.00 0.00 31.63 2.17
128 129 7.493367 TGAAACGGGAACATTTTTGTAAATCT 58.507 30.769 0.00 0.00 31.63 2.40
129 130 7.436673 TGAAACGGGAACATTTTTGTAAATCTG 59.563 33.333 0.00 0.00 31.63 2.90
130 131 6.642707 ACGGGAACATTTTTGTAAATCTGA 57.357 33.333 0.00 0.00 31.63 3.27
131 132 7.045126 ACGGGAACATTTTTGTAAATCTGAA 57.955 32.000 0.00 0.00 31.63 3.02
132 133 7.493367 ACGGGAACATTTTTGTAAATCTGAAA 58.507 30.769 0.00 0.00 31.63 2.69
133 134 7.982354 ACGGGAACATTTTTGTAAATCTGAAAA 59.018 29.630 0.00 0.00 31.63 2.29
134 135 8.821894 CGGGAACATTTTTGTAAATCTGAAAAA 58.178 29.630 0.00 0.00 34.13 1.94
152 153 9.712305 TCTGAAAAAGTTTGAAAAATGTAACCA 57.288 25.926 0.00 0.00 0.00 3.67
186 187 7.565323 TTCATGAACAAAATTTGGAAAAGGG 57.435 32.000 10.71 0.00 34.12 3.95
187 188 6.893583 TCATGAACAAAATTTGGAAAAGGGA 58.106 32.000 10.71 0.00 34.12 4.20
188 189 7.341805 TCATGAACAAAATTTGGAAAAGGGAA 58.658 30.769 10.71 0.00 34.12 3.97
189 190 7.831193 TCATGAACAAAATTTGGAAAAGGGAAA 59.169 29.630 10.71 0.00 34.12 3.13
190 191 8.465201 CATGAACAAAATTTGGAAAAGGGAAAA 58.535 29.630 10.71 0.00 34.12 2.29
191 192 8.409358 TGAACAAAATTTGGAAAAGGGAAAAA 57.591 26.923 10.71 0.00 34.12 1.94
192 193 9.029368 TGAACAAAATTTGGAAAAGGGAAAAAT 57.971 25.926 10.71 0.00 34.12 1.82
193 194 9.868277 GAACAAAATTTGGAAAAGGGAAAAATT 57.132 25.926 10.71 0.00 33.13 1.82
202 203 9.473007 TTGGAAAAGGGAAAAATTTTGAATTCT 57.527 25.926 3.73 0.00 0.00 2.40
203 204 9.473007 TGGAAAAGGGAAAAATTTTGAATTCTT 57.527 25.926 3.73 2.51 0.00 2.52
269 270 8.296799 TGAACAATTTCGGAATCTTTGATTTG 57.703 30.769 12.60 0.00 34.04 2.32
270 271 8.140628 TGAACAATTTCGGAATCTTTGATTTGA 58.859 29.630 12.60 0.00 34.04 2.69
271 272 8.885494 AACAATTTCGGAATCTTTGATTTGAA 57.115 26.923 12.60 0.00 0.00 2.69
272 273 8.885494 ACAATTTCGGAATCTTTGATTTGAAA 57.115 26.923 16.35 16.35 0.00 2.69
273 274 9.323985 ACAATTTCGGAATCTTTGATTTGAAAA 57.676 25.926 17.20 9.50 0.00 2.29
277 278 7.887996 TCGGAATCTTTGATTTGAAAATTGG 57.112 32.000 0.00 0.00 0.00 3.16
278 279 7.665690 TCGGAATCTTTGATTTGAAAATTGGA 58.334 30.769 0.00 0.00 0.00 3.53
279 280 8.147058 TCGGAATCTTTGATTTGAAAATTGGAA 58.853 29.630 0.00 0.00 0.00 3.53
280 281 8.772705 CGGAATCTTTGATTTGAAAATTGGAAA 58.227 29.630 0.00 0.00 0.00 3.13
292 293 9.631452 TTTGAAAATTGGAAAAACATTGAAACC 57.369 25.926 0.00 0.00 0.00 3.27
293 294 7.766283 TGAAAATTGGAAAAACATTGAAACCC 58.234 30.769 0.00 0.00 0.00 4.11
294 295 7.613411 TGAAAATTGGAAAAACATTGAAACCCT 59.387 29.630 0.00 0.00 0.00 4.34
295 296 6.940831 AATTGGAAAAACATTGAAACCCTG 57.059 33.333 0.00 0.00 0.00 4.45
296 297 5.683876 TTGGAAAAACATTGAAACCCTGA 57.316 34.783 0.00 0.00 0.00 3.86
297 298 5.683876 TGGAAAAACATTGAAACCCTGAA 57.316 34.783 0.00 0.00 0.00 3.02
298 299 5.423886 TGGAAAAACATTGAAACCCTGAAC 58.576 37.500 0.00 0.00 0.00 3.18
299 300 5.188751 TGGAAAAACATTGAAACCCTGAACT 59.811 36.000 0.00 0.00 0.00 3.01
300 301 6.112734 GGAAAAACATTGAAACCCTGAACTT 58.887 36.000 0.00 0.00 0.00 2.66
301 302 6.597672 GGAAAAACATTGAAACCCTGAACTTT 59.402 34.615 0.00 0.00 0.00 2.66
302 303 7.120579 GGAAAAACATTGAAACCCTGAACTTTT 59.879 33.333 0.00 0.00 0.00 2.27
303 304 7.994425 AAAACATTGAAACCCTGAACTTTTT 57.006 28.000 0.00 0.00 0.00 1.94
382 383 6.874288 TTTTGAATTAGTGGGCCAAATTTG 57.126 33.333 8.40 11.40 0.00 2.32
383 384 5.815233 TTGAATTAGTGGGCCAAATTTGA 57.185 34.783 19.86 2.04 0.00 2.69
384 385 5.815233 TGAATTAGTGGGCCAAATTTGAA 57.185 34.783 19.86 4.32 0.00 2.69
385 386 6.179906 TGAATTAGTGGGCCAAATTTGAAA 57.820 33.333 19.86 0.00 0.00 2.69
386 387 6.595682 TGAATTAGTGGGCCAAATTTGAAAA 58.404 32.000 19.86 3.59 0.00 2.29
387 388 6.484977 TGAATTAGTGGGCCAAATTTGAAAAC 59.515 34.615 19.86 11.42 0.00 2.43
388 389 3.922171 AGTGGGCCAAATTTGAAAACA 57.078 38.095 19.86 9.71 0.00 2.83
389 390 4.436113 AGTGGGCCAAATTTGAAAACAT 57.564 36.364 19.86 0.00 0.00 2.71
390 391 4.136051 AGTGGGCCAAATTTGAAAACATG 58.864 39.130 19.86 2.03 0.00 3.21
391 392 3.252944 GTGGGCCAAATTTGAAAACATGG 59.747 43.478 19.86 1.81 32.81 3.66
392 393 3.137176 TGGGCCAAATTTGAAAACATGGA 59.863 39.130 19.86 0.00 31.85 3.41
393 394 3.501828 GGGCCAAATTTGAAAACATGGAC 59.498 43.478 19.86 2.59 35.37 4.02
394 395 4.133078 GGCCAAATTTGAAAACATGGACA 58.867 39.130 19.86 0.00 35.88 4.02
395 396 4.578105 GGCCAAATTTGAAAACATGGACAA 59.422 37.500 19.86 0.00 35.88 3.18
396 397 5.241285 GGCCAAATTTGAAAACATGGACAAT 59.759 36.000 19.86 0.00 35.88 2.71
397 398 6.238981 GGCCAAATTTGAAAACATGGACAATT 60.239 34.615 19.86 0.00 35.88 2.32
398 399 7.201835 GCCAAATTTGAAAACATGGACAATTT 58.798 30.769 19.86 0.00 31.85 1.82
399 400 7.705752 GCCAAATTTGAAAACATGGACAATTTT 59.294 29.630 19.86 4.58 31.85 1.82
400 401 9.583765 CCAAATTTGAAAACATGGACAATTTTT 57.416 25.926 19.86 0.00 31.85 1.94
431 432 8.873215 TCTGATAATCTTTTGGAGATACGAAC 57.127 34.615 0.00 0.00 44.41 3.95
432 433 8.696374 TCTGATAATCTTTTGGAGATACGAACT 58.304 33.333 0.00 0.00 44.41 3.01
433 434 9.319143 CTGATAATCTTTTGGAGATACGAACTT 57.681 33.333 0.00 0.00 44.41 2.66
434 435 9.667107 TGATAATCTTTTGGAGATACGAACTTT 57.333 29.630 0.00 0.00 44.41 2.66
438 439 7.795482 TCTTTTGGAGATACGAACTTTTTCA 57.205 32.000 0.00 0.00 0.00 2.69
439 440 8.215926 TCTTTTGGAGATACGAACTTTTTCAA 57.784 30.769 0.00 0.00 0.00 2.69
440 441 8.679100 TCTTTTGGAGATACGAACTTTTTCAAA 58.321 29.630 0.00 0.00 0.00 2.69
441 442 9.296400 CTTTTGGAGATACGAACTTTTTCAAAA 57.704 29.630 0.00 0.00 0.00 2.44
442 443 9.810545 TTTTGGAGATACGAACTTTTTCAAAAT 57.189 25.926 0.00 0.00 0.00 1.82
443 444 9.810545 TTTGGAGATACGAACTTTTTCAAAATT 57.189 25.926 0.00 0.00 0.00 1.82
445 446 9.887406 TGGAGATACGAACTTTTTCAAAATTAC 57.113 29.630 0.00 0.00 0.00 1.89
446 447 9.338291 GGAGATACGAACTTTTTCAAAATTACC 57.662 33.333 0.00 0.00 0.00 2.85
447 448 8.944212 AGATACGAACTTTTTCAAAATTACCG 57.056 30.769 0.00 0.00 0.00 4.02
448 449 8.776470 AGATACGAACTTTTTCAAAATTACCGA 58.224 29.630 0.00 0.00 0.00 4.69
449 450 9.384682 GATACGAACTTTTTCAAAATTACCGAA 57.615 29.630 0.00 0.00 0.00 4.30
450 451 7.440541 ACGAACTTTTTCAAAATTACCGAAC 57.559 32.000 0.00 0.00 0.00 3.95
451 452 7.252708 ACGAACTTTTTCAAAATTACCGAACT 58.747 30.769 0.00 0.00 0.00 3.01
452 453 7.430211 ACGAACTTTTTCAAAATTACCGAACTC 59.570 33.333 0.00 0.00 0.00 3.01
453 454 7.642586 CGAACTTTTTCAAAATTACCGAACTCT 59.357 33.333 0.00 0.00 0.00 3.24
454 455 9.297586 GAACTTTTTCAAAATTACCGAACTCTT 57.702 29.630 0.00 0.00 0.00 2.85
455 456 9.647797 AACTTTTTCAAAATTACCGAACTCTTT 57.352 25.926 0.00 0.00 0.00 2.52
456 457 9.647797 ACTTTTTCAAAATTACCGAACTCTTTT 57.352 25.926 0.00 0.00 0.00 2.27
463 464 9.823979 CAAAATTACCGAACTCTTTTAAAAACG 57.176 29.630 1.66 3.81 0.00 3.60
464 465 7.613247 AATTACCGAACTCTTTTAAAAACGC 57.387 32.000 1.66 0.00 0.00 4.84
465 466 3.610495 ACCGAACTCTTTTAAAAACGCG 58.390 40.909 3.53 3.53 0.00 6.01
466 467 3.309410 ACCGAACTCTTTTAAAAACGCGA 59.691 39.130 15.93 0.00 0.00 5.87
467 468 4.201802 ACCGAACTCTTTTAAAAACGCGAA 60.202 37.500 15.93 0.00 0.00 4.70
468 469 4.907582 CCGAACTCTTTTAAAAACGCGAAT 59.092 37.500 15.93 0.00 0.00 3.34
469 470 5.397240 CCGAACTCTTTTAAAAACGCGAATT 59.603 36.000 15.93 4.26 0.00 2.17
470 471 6.271593 CGAACTCTTTTAAAAACGCGAATTG 58.728 36.000 15.93 0.00 0.00 2.32
471 472 6.505039 AACTCTTTTAAAAACGCGAATTGG 57.495 33.333 15.93 0.00 0.00 3.16
472 473 5.823353 ACTCTTTTAAAAACGCGAATTGGA 58.177 33.333 15.93 0.00 0.00 3.53
473 474 6.267070 ACTCTTTTAAAAACGCGAATTGGAA 58.733 32.000 15.93 2.81 0.00 3.53
474 475 6.921307 ACTCTTTTAAAAACGCGAATTGGAAT 59.079 30.769 15.93 0.00 0.00 3.01
475 476 7.436970 ACTCTTTTAAAAACGCGAATTGGAATT 59.563 29.630 15.93 1.33 0.00 2.17
476 477 8.132604 TCTTTTAAAAACGCGAATTGGAATTT 57.867 26.923 15.93 0.00 0.00 1.82
477 478 8.058915 TCTTTTAAAAACGCGAATTGGAATTTG 58.941 29.630 15.93 0.00 33.74 2.32
478 479 6.830114 TTAAAAACGCGAATTGGAATTTGT 57.170 29.167 15.93 0.00 33.26 2.83
479 480 4.707210 AAAACGCGAATTGGAATTTGTG 57.293 36.364 15.93 10.20 42.99 3.33
480 481 3.634568 AACGCGAATTGGAATTTGTGA 57.365 38.095 15.93 0.00 40.92 3.58
481 482 3.634568 ACGCGAATTGGAATTTGTGAA 57.365 38.095 15.93 0.00 40.92 3.18
482 483 3.305110 ACGCGAATTGGAATTTGTGAAC 58.695 40.909 15.93 0.00 40.92 3.18
483 484 3.243234 ACGCGAATTGGAATTTGTGAACA 60.243 39.130 15.93 0.00 40.92 3.18
484 485 3.733224 CGCGAATTGGAATTTGTGAACAA 59.267 39.130 0.00 0.00 40.92 2.83
485 486 4.143556 CGCGAATTGGAATTTGTGAACAAG 60.144 41.667 0.00 0.00 40.92 3.16
486 487 4.981674 GCGAATTGGAATTTGTGAACAAGA 59.018 37.500 0.00 0.00 37.15 3.02
487 488 5.634859 GCGAATTGGAATTTGTGAACAAGAT 59.365 36.000 0.00 0.00 37.15 2.40
488 489 6.146021 GCGAATTGGAATTTGTGAACAAGATT 59.854 34.615 0.00 0.84 37.15 2.40
489 490 7.619982 GCGAATTGGAATTTGTGAACAAGATTC 60.620 37.037 15.33 15.33 37.15 2.52
490 491 7.409661 CGAATTGGAATTTGTGAACAAGATTCG 60.410 37.037 16.21 15.37 36.01 3.34
491 492 6.384258 TTGGAATTTGTGAACAAGATTCGA 57.616 33.333 16.21 12.96 36.01 3.71
492 493 6.384258 TGGAATTTGTGAACAAGATTCGAA 57.616 33.333 0.00 0.00 36.01 3.71
493 494 6.800543 TGGAATTTGTGAACAAGATTCGAAA 58.199 32.000 0.00 0.00 36.01 3.46
494 495 7.261325 TGGAATTTGTGAACAAGATTCGAAAA 58.739 30.769 0.00 0.00 36.01 2.29
495 496 7.925483 TGGAATTTGTGAACAAGATTCGAAAAT 59.075 29.630 0.00 0.00 36.01 1.82
496 497 9.405587 GGAATTTGTGAACAAGATTCGAAAATA 57.594 29.630 0.00 0.00 36.01 1.40
498 499 7.830217 TTTGTGAACAAGATTCGAAAATACG 57.170 32.000 0.00 0.00 37.15 3.06
499 500 6.772770 TGTGAACAAGATTCGAAAATACGA 57.227 33.333 0.00 0.00 40.55 3.43
500 501 8.123575 TTTGTGAACAAGATTCGAAAATACGAA 58.876 29.630 0.00 0.00 44.52 3.85
577 578 1.120795 AAACCCGACACGGTTCCCTA 61.121 55.000 9.28 0.00 45.63 3.53
638 640 2.851071 GCGGGTGCTAGCGAGAGAT 61.851 63.158 10.77 0.00 38.39 2.75
647 649 2.719979 GCGAGAGATAACGCGGGA 59.280 61.111 12.47 0.00 44.91 5.14
672 674 1.292992 GGTACCCAACGGCTATTTCG 58.707 55.000 0.00 0.00 0.00 3.46
703 705 0.252284 TTCTTCTTCGCCTCCCTCCT 60.252 55.000 0.00 0.00 0.00 3.69
704 706 0.684805 TCTTCTTCGCCTCCCTCCTC 60.685 60.000 0.00 0.00 0.00 3.71
706 708 2.042435 CTTCGCCTCCCTCCTCCT 60.042 66.667 0.00 0.00 0.00 3.69
707 709 2.042843 TTCGCCTCCCTCCTCCTC 60.043 66.667 0.00 0.00 0.00 3.71
709 711 4.465446 CGCCTCCCTCCTCCTCCA 62.465 72.222 0.00 0.00 0.00 3.86
710 712 2.445654 GCCTCCCTCCTCCTCCAG 60.446 72.222 0.00 0.00 0.00 3.86
861 905 3.929610 CCCTGTCTCGTTTCTTGAATCTC 59.070 47.826 0.00 0.00 0.00 2.75
923 967 2.997986 TCGATTTGGCTTACGGTTTCTC 59.002 45.455 0.00 0.00 0.00 2.87
935 990 0.369248 GGTTTCTCGTCGATTTCCGC 59.631 55.000 0.00 0.00 38.37 5.54
948 1003 3.680789 GATTTCCGCGTCGAATTGAATT 58.319 40.909 4.92 0.00 0.00 2.17
956 1011 3.062099 GCGTCGAATTGAATTGCTCTGTA 59.938 43.478 0.00 0.00 0.00 2.74
959 1014 5.220472 CGTCGAATTGAATTGCTCTGTATGT 60.220 40.000 0.00 0.00 0.00 2.29
961 1016 6.036517 GTCGAATTGAATTGCTCTGTATGTCT 59.963 38.462 0.00 0.00 0.00 3.41
963 1018 6.685828 CGAATTGAATTGCTCTGTATGTCTTG 59.314 38.462 0.00 0.00 0.00 3.02
1042 1105 3.847602 CAGAGAGGAGCAGCGGGG 61.848 72.222 0.00 0.00 0.00 5.73
1048 1111 4.864334 GGAGCAGCGGGGGATGTG 62.864 72.222 0.00 0.00 0.00 3.21
1054 1123 4.856801 GCGGGGGATGTGCGTCAT 62.857 66.667 0.00 0.00 39.77 3.06
1096 1171 3.324713 GCTCCAGCCCCTACATGT 58.675 61.111 2.69 2.69 34.31 3.21
1150 1225 3.241553 CGTCAAGCGATATGTGAGTTCTG 59.758 47.826 0.00 0.00 44.77 3.02
1169 1249 3.325201 GATCCCGTGCCCCGTCTTT 62.325 63.158 0.00 0.00 33.66 2.52
1173 1253 3.726517 CGTGCCCCGTCTTTGCTG 61.727 66.667 0.00 0.00 0.00 4.41
1178 1259 2.281761 CCCGTCTTTGCTGGTGCT 60.282 61.111 0.00 0.00 40.48 4.40
1211 1296 1.225745 CGTTCGACGAAATGCCTGC 60.226 57.895 12.67 0.00 46.05 4.85
1289 1383 0.530431 CGCGATGGACATGGACATGA 60.530 55.000 18.38 0.00 41.20 3.07
1339 1433 3.986006 AAGGAGAACGCGGCGACA 61.986 61.111 30.94 0.00 0.00 4.35
1573 1672 4.037446 TCATTGGTGTTCCAGTTTTAGTGC 59.963 41.667 0.00 0.00 45.22 4.40
1582 1681 4.072131 TCCAGTTTTAGTGCTGATTGGTC 58.928 43.478 0.00 0.00 34.87 4.02
1599 1701 8.255111 TGATTGGTCATGATTACTGACTCTAT 57.745 34.615 0.00 0.00 42.14 1.98
1626 1729 9.546428 CTATGTACAATGTAAACCTGATGATGA 57.454 33.333 0.00 0.00 0.00 2.92
1675 1778 2.868583 CAGGCCTCGTTGATGATTACTG 59.131 50.000 0.00 0.00 0.00 2.74
1679 1782 3.535561 CCTCGTTGATGATTACTGCCTT 58.464 45.455 0.00 0.00 0.00 4.35
1697 1800 1.497309 TTAACCTGCTGGACTGGGGG 61.497 60.000 17.64 0.00 41.59 5.40
1885 1988 4.972875 CCAGCTCTGGGATTCCAC 57.027 61.111 8.03 0.00 46.81 4.02
1925 2030 1.615392 CCTTTTTGGCCTCTCCTGTTG 59.385 52.381 3.32 0.00 35.26 3.33
1998 2108 2.408271 TTCATTCTGCAGCGGAGAAT 57.592 45.000 9.47 15.62 40.16 2.40
2116 2226 3.515602 ATGAGGATTAGGAACCATGCC 57.484 47.619 0.00 0.00 0.00 4.40
2160 2270 1.002087 CCAGGAGGTGTGTGGACTTAC 59.998 57.143 0.00 0.00 32.60 2.34
2177 2287 0.333652 TACGTGGTCAGGATCAGGGA 59.666 55.000 0.00 0.00 32.04 4.20
2181 2291 1.484240 GTGGTCAGGATCAGGGAAGAG 59.516 57.143 0.00 0.00 0.00 2.85
2183 2293 1.623834 GGTCAGGATCAGGGAAGAGGT 60.624 57.143 0.00 0.00 0.00 3.85
2205 2315 1.301716 CCAGTGGTGGGAACGACAG 60.302 63.158 0.00 0.00 40.67 3.51
2288 2398 1.539496 GGTTACACAGGCTTGACGACA 60.539 52.381 1.40 0.00 0.00 4.35
2307 2417 3.058160 CTTGGCTGCCGTGAAGGG 61.058 66.667 14.98 0.00 41.48 3.95
2326 2436 1.297364 GCTTGCATGGTGCCCATTT 59.703 52.632 4.15 0.00 42.23 2.32
2366 2476 4.367023 GCGGTGGCGTAGGTGACA 62.367 66.667 0.00 0.00 0.00 3.58
2394 2504 5.350633 CATCAAGTTTTGGAACACACACAT 58.649 37.500 0.00 0.00 39.29 3.21
2416 2526 0.804989 GCGCATGCCTTAACTCTGTT 59.195 50.000 13.15 0.00 33.98 3.16
2485 2595 2.037136 GCTGTTGAGCTCGCATGGT 61.037 57.895 9.64 0.00 42.52 3.55
2555 2665 0.458669 GGCTGAACTCAATGGCCATG 59.541 55.000 21.63 13.71 42.08 3.66
2584 2694 0.982852 TCCTCTACATGGCCCAGGTG 60.983 60.000 12.07 1.40 29.18 4.00
2685 2808 0.407139 ACCTTTGCAGAGCCCTGATT 59.593 50.000 0.00 0.00 43.02 2.57
2686 2809 0.815734 CCTTTGCAGAGCCCTGATTG 59.184 55.000 0.00 0.00 43.02 2.67
2687 2810 1.542492 CTTTGCAGAGCCCTGATTGT 58.458 50.000 0.00 0.00 43.02 2.71
2688 2811 1.891150 CTTTGCAGAGCCCTGATTGTT 59.109 47.619 0.00 0.00 43.02 2.83
2689 2812 2.877097 TTGCAGAGCCCTGATTGTTA 57.123 45.000 0.00 0.00 43.02 2.41
2690 2813 2.877097 TGCAGAGCCCTGATTGTTAA 57.123 45.000 0.00 0.00 43.02 2.01
2691 2814 2.436417 TGCAGAGCCCTGATTGTTAAC 58.564 47.619 0.00 0.00 43.02 2.01
2692 2815 2.224744 TGCAGAGCCCTGATTGTTAACA 60.225 45.455 3.59 3.59 43.02 2.41
2693 2816 3.019564 GCAGAGCCCTGATTGTTAACAT 58.980 45.455 9.56 0.00 43.02 2.71
2694 2817 3.181493 GCAGAGCCCTGATTGTTAACATG 60.181 47.826 9.56 1.72 43.02 3.21
2695 2818 4.012374 CAGAGCCCTGATTGTTAACATGT 58.988 43.478 9.56 1.16 43.02 3.21
2696 2819 5.185454 CAGAGCCCTGATTGTTAACATGTA 58.815 41.667 9.56 0.00 43.02 2.29
2697 2820 5.824624 CAGAGCCCTGATTGTTAACATGTAT 59.175 40.000 9.56 0.00 43.02 2.29
2698 2821 6.319658 CAGAGCCCTGATTGTTAACATGTATT 59.680 38.462 9.56 0.00 43.02 1.89
2699 2822 6.319658 AGAGCCCTGATTGTTAACATGTATTG 59.680 38.462 9.56 0.00 0.00 1.90
2700 2823 5.951747 AGCCCTGATTGTTAACATGTATTGT 59.048 36.000 9.56 0.00 41.53 2.71
2701 2824 7.116075 AGCCCTGATTGTTAACATGTATTGTA 58.884 34.615 9.56 0.00 37.68 2.41
2702 2825 7.779798 AGCCCTGATTGTTAACATGTATTGTAT 59.220 33.333 9.56 0.00 37.68 2.29
2703 2826 9.062524 GCCCTGATTGTTAACATGTATTGTATA 57.937 33.333 9.56 0.00 37.68 1.47
2728 2851 6.945938 ACTCATGTATGTGTACTCTAGTCC 57.054 41.667 0.00 0.00 33.25 3.85
2729 2852 5.527951 ACTCATGTATGTGTACTCTAGTCCG 59.472 44.000 0.00 0.00 33.25 4.79
2730 2853 4.275196 TCATGTATGTGTACTCTAGTCCGC 59.725 45.833 0.00 0.00 0.00 5.54
2731 2854 3.882444 TGTATGTGTACTCTAGTCCGCT 58.118 45.455 0.00 0.00 0.00 5.52
2732 2855 3.875727 TGTATGTGTACTCTAGTCCGCTC 59.124 47.826 0.00 0.00 0.00 5.03
2733 2856 1.747709 TGTGTACTCTAGTCCGCTCC 58.252 55.000 0.00 0.00 0.00 4.70
2734 2857 1.281287 TGTGTACTCTAGTCCGCTCCT 59.719 52.381 0.00 0.00 0.00 3.69
2735 2858 1.671845 GTGTACTCTAGTCCGCTCCTG 59.328 57.143 0.00 0.00 0.00 3.86
2736 2859 1.558294 TGTACTCTAGTCCGCTCCTGA 59.442 52.381 0.00 0.00 0.00 3.86
2737 2860 2.172930 TGTACTCTAGTCCGCTCCTGAT 59.827 50.000 0.00 0.00 0.00 2.90
2738 2861 1.975660 ACTCTAGTCCGCTCCTGATC 58.024 55.000 0.00 0.00 0.00 2.92
2739 2862 1.493022 ACTCTAGTCCGCTCCTGATCT 59.507 52.381 0.00 0.00 0.00 2.75
2740 2863 2.092103 ACTCTAGTCCGCTCCTGATCTT 60.092 50.000 0.00 0.00 0.00 2.40
2741 2864 2.955660 CTCTAGTCCGCTCCTGATCTTT 59.044 50.000 0.00 0.00 0.00 2.52
2742 2865 4.138290 CTCTAGTCCGCTCCTGATCTTTA 58.862 47.826 0.00 0.00 0.00 1.85
2743 2866 4.138290 TCTAGTCCGCTCCTGATCTTTAG 58.862 47.826 0.00 0.00 0.00 1.85
2744 2867 2.035632 AGTCCGCTCCTGATCTTTAGG 58.964 52.381 0.00 0.00 36.63 2.69
2745 2868 2.032620 GTCCGCTCCTGATCTTTAGGA 58.967 52.381 0.67 0.67 41.91 2.94
2746 2869 2.630580 GTCCGCTCCTGATCTTTAGGAT 59.369 50.000 0.95 0.00 43.10 3.24
2756 2879 4.535526 GATCTTTAGGATCTGAGCCCTC 57.464 50.000 8.61 0.00 45.38 4.30
2757 2880 2.311463 TCTTTAGGATCTGAGCCCTCG 58.689 52.381 8.61 0.00 34.11 4.63
2758 2881 0.753262 TTTAGGATCTGAGCCCTCGC 59.247 55.000 8.61 0.00 34.11 5.03
2759 2882 1.115930 TTAGGATCTGAGCCCTCGCC 61.116 60.000 8.61 0.00 34.11 5.54
2760 2883 3.934962 GGATCTGAGCCCTCGCCC 61.935 72.222 0.00 0.00 34.57 6.13
2761 2884 3.157252 GATCTGAGCCCTCGCCCA 61.157 66.667 0.00 0.00 34.57 5.36
2762 2885 3.160047 ATCTGAGCCCTCGCCCAG 61.160 66.667 0.00 0.00 34.57 4.45
2780 2903 4.394712 GCCTGCGTGCCACCTAGT 62.395 66.667 0.00 0.00 0.00 2.57
2781 2904 2.347490 CCTGCGTGCCACCTAGTT 59.653 61.111 0.00 0.00 0.00 2.24
2782 2905 1.741770 CCTGCGTGCCACCTAGTTC 60.742 63.158 0.00 0.00 0.00 3.01
2783 2906 2.048597 TGCGTGCCACCTAGTTCG 60.049 61.111 0.00 0.00 0.00 3.95
2784 2907 2.813908 GCGTGCCACCTAGTTCGG 60.814 66.667 0.00 0.00 0.00 4.30
2785 2908 2.125673 CGTGCCACCTAGTTCGGG 60.126 66.667 0.00 0.00 0.00 5.14
2786 2909 2.436115 GTGCCACCTAGTTCGGGC 60.436 66.667 0.00 0.00 46.58 6.13
2787 2910 2.606519 TGCCACCTAGTTCGGGCT 60.607 61.111 11.08 0.00 46.53 5.19
2788 2911 2.187163 GCCACCTAGTTCGGGCTC 59.813 66.667 0.00 0.00 43.09 4.70
2789 2912 2.901042 CCACCTAGTTCGGGCTCC 59.099 66.667 0.00 0.00 0.00 4.70
2790 2913 2.732619 CCACCTAGTTCGGGCTCCC 61.733 68.421 0.00 0.00 0.00 4.30
2791 2914 1.686110 CACCTAGTTCGGGCTCCCT 60.686 63.158 3.11 0.00 0.00 4.20
2792 2915 1.080538 ACCTAGTTCGGGCTCCCTT 59.919 57.895 3.11 0.00 0.00 3.95
2793 2916 1.265454 ACCTAGTTCGGGCTCCCTTG 61.265 60.000 3.11 0.00 0.00 3.61
2794 2917 1.265454 CCTAGTTCGGGCTCCCTTGT 61.265 60.000 3.11 0.00 0.00 3.16
2795 2918 1.481871 CTAGTTCGGGCTCCCTTGTA 58.518 55.000 3.11 0.00 0.00 2.41
2796 2919 1.829222 CTAGTTCGGGCTCCCTTGTAA 59.171 52.381 3.11 0.00 0.00 2.41
2797 2920 0.323957 AGTTCGGGCTCCCTTGTAAC 59.676 55.000 3.11 2.98 0.00 2.50
2798 2921 0.323957 GTTCGGGCTCCCTTGTAACT 59.676 55.000 3.11 0.00 0.00 2.24
2799 2922 1.061546 TTCGGGCTCCCTTGTAACTT 58.938 50.000 3.11 0.00 0.00 2.66
2800 2923 0.611714 TCGGGCTCCCTTGTAACTTC 59.388 55.000 3.11 0.00 0.00 3.01
2801 2924 0.613777 CGGGCTCCCTTGTAACTTCT 59.386 55.000 3.11 0.00 0.00 2.85
2802 2925 1.003233 CGGGCTCCCTTGTAACTTCTT 59.997 52.381 3.11 0.00 0.00 2.52
2803 2926 2.437413 GGGCTCCCTTGTAACTTCTTG 58.563 52.381 0.00 0.00 0.00 3.02
2804 2927 2.224793 GGGCTCCCTTGTAACTTCTTGT 60.225 50.000 0.00 0.00 0.00 3.16
2805 2928 3.008704 GGGCTCCCTTGTAACTTCTTGTA 59.991 47.826 0.00 0.00 0.00 2.41
2806 2929 4.324331 GGGCTCCCTTGTAACTTCTTGTAT 60.324 45.833 0.00 0.00 0.00 2.29
2807 2930 5.104652 GGGCTCCCTTGTAACTTCTTGTATA 60.105 44.000 0.00 0.00 0.00 1.47
2808 2931 6.412214 GGCTCCCTTGTAACTTCTTGTATAA 58.588 40.000 0.00 0.00 0.00 0.98
2809 2932 6.882678 GGCTCCCTTGTAACTTCTTGTATAAA 59.117 38.462 0.00 0.00 0.00 1.40
2810 2933 7.556635 GGCTCCCTTGTAACTTCTTGTATAAAT 59.443 37.037 0.00 0.00 0.00 1.40
2811 2934 8.957466 GCTCCCTTGTAACTTCTTGTATAAATT 58.043 33.333 0.00 0.00 0.00 1.82
2813 2936 9.802039 TCCCTTGTAACTTCTTGTATAAATTGT 57.198 29.630 0.00 0.00 0.00 2.71
2821 2944 8.475331 ACTTCTTGTATAAATTGTACAGTCCG 57.525 34.615 3.00 0.00 33.92 4.79
2822 2945 6.897259 TCTTGTATAAATTGTACAGTCCGC 57.103 37.500 3.00 0.00 33.92 5.54
2823 2946 6.399743 TCTTGTATAAATTGTACAGTCCGCA 58.600 36.000 3.00 0.00 33.92 5.69
2824 2947 7.045416 TCTTGTATAAATTGTACAGTCCGCAT 58.955 34.615 3.00 0.00 33.92 4.73
2825 2948 6.838198 TGTATAAATTGTACAGTCCGCATC 57.162 37.500 0.00 0.00 0.00 3.91
2826 2949 5.756347 TGTATAAATTGTACAGTCCGCATCC 59.244 40.000 0.00 0.00 0.00 3.51
2827 2950 2.779755 AATTGTACAGTCCGCATCCA 57.220 45.000 0.00 0.00 0.00 3.41
2828 2951 2.779755 ATTGTACAGTCCGCATCCAA 57.220 45.000 0.00 0.00 0.00 3.53
2829 2952 2.093306 TTGTACAGTCCGCATCCAAG 57.907 50.000 0.00 0.00 0.00 3.61
2830 2953 0.249120 TGTACAGTCCGCATCCAAGG 59.751 55.000 0.00 0.00 0.00 3.61
2831 2954 1.090052 GTACAGTCCGCATCCAAGGC 61.090 60.000 0.00 0.00 0.00 4.35
2832 2955 1.549243 TACAGTCCGCATCCAAGGCA 61.549 55.000 0.00 0.00 0.00 4.75
2833 2956 1.675310 CAGTCCGCATCCAAGGCAA 60.675 57.895 0.00 0.00 0.00 4.52
2834 2957 1.033746 CAGTCCGCATCCAAGGCAAT 61.034 55.000 0.00 0.00 0.00 3.56
2835 2958 0.546122 AGTCCGCATCCAAGGCAATA 59.454 50.000 0.00 0.00 0.00 1.90
2836 2959 0.663153 GTCCGCATCCAAGGCAATAC 59.337 55.000 0.00 0.00 0.00 1.89
2837 2960 0.254462 TCCGCATCCAAGGCAATACA 59.746 50.000 0.00 0.00 0.00 2.29
2838 2961 0.381801 CCGCATCCAAGGCAATACAC 59.618 55.000 0.00 0.00 0.00 2.90
2839 2962 1.093972 CGCATCCAAGGCAATACACA 58.906 50.000 0.00 0.00 0.00 3.72
2840 2963 1.064505 CGCATCCAAGGCAATACACAG 59.935 52.381 0.00 0.00 0.00 3.66
2841 2964 2.368439 GCATCCAAGGCAATACACAGA 58.632 47.619 0.00 0.00 0.00 3.41
2842 2965 2.357009 GCATCCAAGGCAATACACAGAG 59.643 50.000 0.00 0.00 0.00 3.35
2843 2966 2.113860 TCCAAGGCAATACACAGAGC 57.886 50.000 0.00 0.00 0.00 4.09
2844 2967 1.350684 TCCAAGGCAATACACAGAGCA 59.649 47.619 0.00 0.00 0.00 4.26
2845 2968 2.161855 CCAAGGCAATACACAGAGCAA 58.838 47.619 0.00 0.00 0.00 3.91
2846 2969 2.557924 CCAAGGCAATACACAGAGCAAA 59.442 45.455 0.00 0.00 0.00 3.68
2847 2970 3.194116 CCAAGGCAATACACAGAGCAAAT 59.806 43.478 0.00 0.00 0.00 2.32
2848 2971 4.322198 CCAAGGCAATACACAGAGCAAATT 60.322 41.667 0.00 0.00 0.00 1.82
2849 2972 4.708726 AGGCAATACACAGAGCAAATTC 57.291 40.909 0.00 0.00 0.00 2.17
2850 2973 4.338879 AGGCAATACACAGAGCAAATTCT 58.661 39.130 0.00 0.00 0.00 2.40
2851 2974 5.500234 AGGCAATACACAGAGCAAATTCTA 58.500 37.500 0.00 0.00 0.00 2.10
2852 2975 6.125029 AGGCAATACACAGAGCAAATTCTAT 58.875 36.000 0.00 0.00 0.00 1.98
2853 2976 6.261826 AGGCAATACACAGAGCAAATTCTATC 59.738 38.462 0.00 0.00 0.00 2.08
2854 2977 6.132056 GCAATACACAGAGCAAATTCTATCG 58.868 40.000 0.00 0.00 0.00 2.92
2855 2978 5.914085 ATACACAGAGCAAATTCTATCGC 57.086 39.130 0.00 0.00 0.00 4.58
2856 2979 2.939103 ACACAGAGCAAATTCTATCGCC 59.061 45.455 0.00 0.00 0.00 5.54
2857 2980 3.201290 CACAGAGCAAATTCTATCGCCT 58.799 45.455 0.00 0.00 0.00 5.52
2858 2981 4.141937 ACACAGAGCAAATTCTATCGCCTA 60.142 41.667 0.00 0.00 0.00 3.93
2859 2982 4.811024 CACAGAGCAAATTCTATCGCCTAA 59.189 41.667 0.00 0.00 0.00 2.69
2860 2983 4.811557 ACAGAGCAAATTCTATCGCCTAAC 59.188 41.667 0.00 0.00 0.00 2.34
2861 2984 5.053145 CAGAGCAAATTCTATCGCCTAACT 58.947 41.667 0.00 0.00 0.00 2.24
2862 2985 5.176590 CAGAGCAAATTCTATCGCCTAACTC 59.823 44.000 0.00 0.00 0.00 3.01
2863 2986 5.069781 AGAGCAAATTCTATCGCCTAACTCT 59.930 40.000 0.00 0.00 0.00 3.24
2864 2987 5.053145 AGCAAATTCTATCGCCTAACTCTG 58.947 41.667 0.00 0.00 0.00 3.35
2865 2988 5.050490 GCAAATTCTATCGCCTAACTCTGA 58.950 41.667 0.00 0.00 0.00 3.27
2866 2989 5.698545 GCAAATTCTATCGCCTAACTCTGAT 59.301 40.000 0.00 0.00 0.00 2.90
2920 3043 0.878961 AACTGCGGTTCTGGAACGTC 60.879 55.000 4.68 2.99 42.02 4.34
2923 3046 0.179067 TGCGGTTCTGGAACGTCTTT 60.179 50.000 0.00 0.00 42.02 2.52
2972 3110 3.326880 AGTCTACAGGGGAACGTTCAATT 59.673 43.478 28.24 10.79 0.00 2.32
2977 3115 4.403734 ACAGGGGAACGTTCAATTGTTAT 58.596 39.130 28.24 5.93 0.00 1.89
3002 3140 1.944024 ACATCCGCTAGAGAGAAGTCG 59.056 52.381 0.00 0.00 0.00 4.18
3007 3145 4.643463 TCCGCTAGAGAGAAGTCGATATT 58.357 43.478 0.00 0.00 0.00 1.28
3048 3197 4.893524 CCAAAGTCTAATATCCAAACCCCC 59.106 45.833 0.00 0.00 0.00 5.40
3078 3269 0.249398 ACCGTCCACTTCAGTATGCC 59.751 55.000 0.00 0.00 34.76 4.40
3079 3270 0.462047 CCGTCCACTTCAGTATGCCC 60.462 60.000 0.00 0.00 34.76 5.36
3167 3359 8.763049 ATTATACATAACAGATGTCGGTGATG 57.237 34.615 8.53 8.53 38.41 3.07
3225 3519 0.960861 AGCATGTGTCGTCCGAGAGA 60.961 55.000 0.00 0.00 0.00 3.10
3336 3642 7.309194 GCTTCTCTTTTGGTTGCCTTCTTTATA 60.309 37.037 0.00 0.00 0.00 0.98
3348 3654 6.003950 TGCCTTCTTTATACAACTTGAAGCT 58.996 36.000 0.00 0.00 32.21 3.74
3355 3661 9.890629 TCTTTATACAACTTGAAGCTATCATGT 57.109 29.630 9.88 9.88 45.48 3.21
3375 3681 6.595326 TCATGTTCTGTGACCACTATTTGATC 59.405 38.462 1.62 0.00 0.00 2.92
3446 6319 3.584733 ATTCCCACCAGAAATCTAGCC 57.415 47.619 0.00 0.00 0.00 3.93
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.839310 TTCAGAAAAATGTTCCTGTTTTCAAA 57.161 26.923 9.90 2.80 41.56 2.69
1 2 8.839310 TTTCAGAAAAATGTTCCTGTTTTCAA 57.161 26.923 9.90 0.00 41.56 2.69
2 3 9.447157 AATTTCAGAAAAATGTTCCTGTTTTCA 57.553 25.926 0.00 0.00 41.56 2.69
3 4 9.920826 GAATTTCAGAAAAATGTTCCTGTTTTC 57.079 29.630 0.00 0.00 40.14 2.29
4 5 9.671279 AGAATTTCAGAAAAATGTTCCTGTTTT 57.329 25.926 0.00 0.00 0.00 2.43
5 6 9.101655 CAGAATTTCAGAAAAATGTTCCTGTTT 57.898 29.630 0.00 0.00 0.00 2.83
6 7 8.477256 TCAGAATTTCAGAAAAATGTTCCTGTT 58.523 29.630 0.00 0.00 0.00 3.16
7 8 8.010733 TCAGAATTTCAGAAAAATGTTCCTGT 57.989 30.769 0.00 0.00 0.00 4.00
8 9 8.758715 GTTCAGAATTTCAGAAAAATGTTCCTG 58.241 33.333 5.88 1.34 0.00 3.86
9 10 7.928167 GGTTCAGAATTTCAGAAAAATGTTCCT 59.072 33.333 5.88 0.00 0.00 3.36
10 11 7.710475 TGGTTCAGAATTTCAGAAAAATGTTCC 59.290 33.333 5.88 3.00 0.00 3.62
11 12 8.647143 TGGTTCAGAATTTCAGAAAAATGTTC 57.353 30.769 5.88 0.00 0.00 3.18
12 13 9.617523 ATTGGTTCAGAATTTCAGAAAAATGTT 57.382 25.926 5.88 0.00 0.00 2.71
13 14 9.617523 AATTGGTTCAGAATTTCAGAAAAATGT 57.382 25.926 5.88 0.00 0.00 2.71
16 17 9.889128 AGAAATTGGTTCAGAATTTCAGAAAAA 57.111 25.926 16.31 5.07 45.92 1.94
17 18 9.316730 CAGAAATTGGTTCAGAATTTCAGAAAA 57.683 29.630 16.31 0.00 45.92 2.29
18 19 8.694540 TCAGAAATTGGTTCAGAATTTCAGAAA 58.305 29.630 16.31 0.00 45.92 2.52
19 20 8.236585 TCAGAAATTGGTTCAGAATTTCAGAA 57.763 30.769 16.31 0.53 45.92 3.02
20 21 7.822161 TCAGAAATTGGTTCAGAATTTCAGA 57.178 32.000 16.31 12.29 45.92 3.27
21 22 8.876275 TTTCAGAAATTGGTTCAGAATTTCAG 57.124 30.769 16.31 10.65 45.92 3.02
22 23 9.664332 TTTTTCAGAAATTGGTTCAGAATTTCA 57.336 25.926 16.31 0.00 45.92 2.69
24 25 9.889128 TCTTTTTCAGAAATTGGTTCAGAATTT 57.111 25.926 0.00 0.00 40.30 1.82
25 26 9.317936 GTCTTTTTCAGAAATTGGTTCAGAATT 57.682 29.630 0.00 0.00 40.30 2.17
26 27 8.477256 TGTCTTTTTCAGAAATTGGTTCAGAAT 58.523 29.630 0.00 0.00 40.30 2.40
27 28 7.835822 TGTCTTTTTCAGAAATTGGTTCAGAA 58.164 30.769 0.00 0.00 39.28 3.02
28 29 7.403312 TGTCTTTTTCAGAAATTGGTTCAGA 57.597 32.000 0.00 0.00 38.86 3.27
29 30 8.382875 GTTTGTCTTTTTCAGAAATTGGTTCAG 58.617 33.333 0.00 0.00 38.86 3.02
30 31 7.875041 TGTTTGTCTTTTTCAGAAATTGGTTCA 59.125 29.630 0.00 0.00 38.86 3.18
31 32 8.250538 TGTTTGTCTTTTTCAGAAATTGGTTC 57.749 30.769 0.00 0.00 36.38 3.62
32 33 8.791327 ATGTTTGTCTTTTTCAGAAATTGGTT 57.209 26.923 0.00 0.00 31.28 3.67
33 34 8.791327 AATGTTTGTCTTTTTCAGAAATTGGT 57.209 26.923 0.00 0.00 31.28 3.67
84 85 8.759641 CCGTTTCAAAAATTGTTCACATATTCA 58.240 29.630 0.00 0.00 0.00 2.57
85 86 8.220434 CCCGTTTCAAAAATTGTTCACATATTC 58.780 33.333 0.00 0.00 0.00 1.75
86 87 7.928706 TCCCGTTTCAAAAATTGTTCACATATT 59.071 29.630 0.00 0.00 0.00 1.28
87 88 7.437748 TCCCGTTTCAAAAATTGTTCACATAT 58.562 30.769 0.00 0.00 0.00 1.78
88 89 6.806751 TCCCGTTTCAAAAATTGTTCACATA 58.193 32.000 0.00 0.00 0.00 2.29
89 90 5.665459 TCCCGTTTCAAAAATTGTTCACAT 58.335 33.333 0.00 0.00 0.00 3.21
90 91 5.073311 TCCCGTTTCAAAAATTGTTCACA 57.927 34.783 0.00 0.00 0.00 3.58
91 92 5.348997 TGTTCCCGTTTCAAAAATTGTTCAC 59.651 36.000 0.00 0.00 0.00 3.18
92 93 5.479306 TGTTCCCGTTTCAAAAATTGTTCA 58.521 33.333 0.00 0.00 0.00 3.18
93 94 6.597262 ATGTTCCCGTTTCAAAAATTGTTC 57.403 33.333 0.00 0.00 0.00 3.18
94 95 6.993786 AATGTTCCCGTTTCAAAAATTGTT 57.006 29.167 0.00 0.00 0.00 2.83
95 96 6.993786 AAATGTTCCCGTTTCAAAAATTGT 57.006 29.167 0.00 0.00 0.00 2.71
96 97 7.752686 ACAAAAATGTTCCCGTTTCAAAAATTG 59.247 29.630 0.00 0.00 0.00 2.32
97 98 7.821652 ACAAAAATGTTCCCGTTTCAAAAATT 58.178 26.923 0.00 0.00 0.00 1.82
98 99 7.384439 ACAAAAATGTTCCCGTTTCAAAAAT 57.616 28.000 0.00 0.00 0.00 1.82
99 100 6.803154 ACAAAAATGTTCCCGTTTCAAAAA 57.197 29.167 0.00 0.00 0.00 1.94
100 101 7.900782 TTACAAAAATGTTCCCGTTTCAAAA 57.099 28.000 0.00 0.00 0.00 2.44
101 102 7.900782 TTTACAAAAATGTTCCCGTTTCAAA 57.099 28.000 0.00 0.00 0.00 2.69
102 103 7.982354 AGATTTACAAAAATGTTCCCGTTTCAA 59.018 29.630 0.00 0.00 35.41 2.69
103 104 7.436673 CAGATTTACAAAAATGTTCCCGTTTCA 59.563 33.333 0.00 0.00 35.41 2.69
104 105 7.650104 TCAGATTTACAAAAATGTTCCCGTTTC 59.350 33.333 0.00 0.00 35.41 2.78
105 106 7.493367 TCAGATTTACAAAAATGTTCCCGTTT 58.507 30.769 0.00 0.00 35.41 3.60
106 107 7.045126 TCAGATTTACAAAAATGTTCCCGTT 57.955 32.000 0.00 0.00 35.41 4.44
107 108 6.642707 TCAGATTTACAAAAATGTTCCCGT 57.357 33.333 0.00 0.00 35.41 5.28
108 109 7.938563 TTTCAGATTTACAAAAATGTTCCCG 57.061 32.000 0.00 0.00 35.41 5.14
126 127 9.712305 TGGTTACATTTTTCAAACTTTTTCAGA 57.288 25.926 0.00 0.00 0.00 3.27
160 161 9.282569 CCCTTTTCCAAATTTTGTTCATGAATA 57.717 29.630 12.12 6.04 0.00 1.75
161 162 7.997803 TCCCTTTTCCAAATTTTGTTCATGAAT 59.002 29.630 12.12 0.00 0.00 2.57
162 163 7.341805 TCCCTTTTCCAAATTTTGTTCATGAA 58.658 30.769 3.38 3.38 0.00 2.57
163 164 6.893583 TCCCTTTTCCAAATTTTGTTCATGA 58.106 32.000 8.26 0.00 0.00 3.07
164 165 7.565323 TTCCCTTTTCCAAATTTTGTTCATG 57.435 32.000 8.26 0.00 0.00 3.07
165 166 8.586879 TTTTCCCTTTTCCAAATTTTGTTCAT 57.413 26.923 8.26 0.00 0.00 2.57
166 167 8.409358 TTTTTCCCTTTTCCAAATTTTGTTCA 57.591 26.923 8.26 0.00 0.00 3.18
167 168 9.868277 AATTTTTCCCTTTTCCAAATTTTGTTC 57.132 25.926 8.26 0.00 0.00 3.18
176 177 9.473007 AGAATTCAAAATTTTTCCCTTTTCCAA 57.527 25.926 8.44 0.00 0.00 3.53
177 178 9.473007 AAGAATTCAAAATTTTTCCCTTTTCCA 57.527 25.926 8.44 0.00 0.00 3.53
243 244 8.928733 CAAATCAAAGATTCCGAAATTGTTCAT 58.071 29.630 0.00 0.00 32.89 2.57
244 245 8.140628 TCAAATCAAAGATTCCGAAATTGTTCA 58.859 29.630 0.00 0.00 32.89 3.18
245 246 8.519492 TCAAATCAAAGATTCCGAAATTGTTC 57.481 30.769 0.00 0.00 0.00 3.18
246 247 8.885494 TTCAAATCAAAGATTCCGAAATTGTT 57.115 26.923 0.00 0.00 0.00 2.83
247 248 8.885494 TTTCAAATCAAAGATTCCGAAATTGT 57.115 26.923 10.65 0.00 0.00 2.71
251 252 8.772705 CCAATTTTCAAATCAAAGATTCCGAAA 58.227 29.630 10.65 10.65 0.00 3.46
252 253 8.147058 TCCAATTTTCAAATCAAAGATTCCGAA 58.853 29.630 0.00 0.00 0.00 4.30
253 254 7.665690 TCCAATTTTCAAATCAAAGATTCCGA 58.334 30.769 0.00 0.00 0.00 4.55
254 255 7.887996 TCCAATTTTCAAATCAAAGATTCCG 57.112 32.000 0.00 0.00 0.00 4.30
266 267 9.631452 GGTTTCAATGTTTTTCCAATTTTCAAA 57.369 25.926 0.00 0.00 0.00 2.69
267 268 8.246871 GGGTTTCAATGTTTTTCCAATTTTCAA 58.753 29.630 0.00 0.00 0.00 2.69
268 269 7.613411 AGGGTTTCAATGTTTTTCCAATTTTCA 59.387 29.630 0.00 0.00 0.00 2.69
269 270 7.914871 CAGGGTTTCAATGTTTTTCCAATTTTC 59.085 33.333 0.00 0.00 0.00 2.29
270 271 7.613411 TCAGGGTTTCAATGTTTTTCCAATTTT 59.387 29.630 0.00 0.00 0.00 1.82
271 272 7.115414 TCAGGGTTTCAATGTTTTTCCAATTT 58.885 30.769 0.00 0.00 0.00 1.82
272 273 6.657875 TCAGGGTTTCAATGTTTTTCCAATT 58.342 32.000 0.00 0.00 0.00 2.32
273 274 6.245890 TCAGGGTTTCAATGTTTTTCCAAT 57.754 33.333 0.00 0.00 0.00 3.16
274 275 5.683876 TCAGGGTTTCAATGTTTTTCCAA 57.316 34.783 0.00 0.00 0.00 3.53
275 276 5.188751 AGTTCAGGGTTTCAATGTTTTTCCA 59.811 36.000 0.00 0.00 0.00 3.53
276 277 5.670485 AGTTCAGGGTTTCAATGTTTTTCC 58.330 37.500 0.00 0.00 0.00 3.13
277 278 7.609760 AAAGTTCAGGGTTTCAATGTTTTTC 57.390 32.000 0.00 0.00 0.00 2.29
278 279 7.994425 AAAAGTTCAGGGTTTCAATGTTTTT 57.006 28.000 0.00 0.00 0.00 1.94
279 280 7.994425 AAAAAGTTCAGGGTTTCAATGTTTT 57.006 28.000 0.00 0.00 0.00 2.43
358 359 7.056635 TCAAATTTGGCCCACTAATTCAAAAA 58.943 30.769 17.90 0.00 34.22 1.94
359 360 6.595682 TCAAATTTGGCCCACTAATTCAAAA 58.404 32.000 17.90 0.00 34.22 2.44
360 361 6.179906 TCAAATTTGGCCCACTAATTCAAA 57.820 33.333 17.90 0.00 34.22 2.69
361 362 5.815233 TCAAATTTGGCCCACTAATTCAA 57.185 34.783 17.90 0.00 34.22 2.69
362 363 5.815233 TTCAAATTTGGCCCACTAATTCA 57.185 34.783 17.90 0.00 34.22 2.57
363 364 6.484977 TGTTTTCAAATTTGGCCCACTAATTC 59.515 34.615 17.90 1.45 34.22 2.17
364 365 6.360618 TGTTTTCAAATTTGGCCCACTAATT 58.639 32.000 17.90 0.00 36.33 1.40
365 366 5.934781 TGTTTTCAAATTTGGCCCACTAAT 58.065 33.333 17.90 0.00 0.00 1.73
366 367 5.359194 TGTTTTCAAATTTGGCCCACTAA 57.641 34.783 17.90 0.46 0.00 2.24
367 368 5.303971 CATGTTTTCAAATTTGGCCCACTA 58.696 37.500 17.90 0.00 0.00 2.74
368 369 3.922171 TGTTTTCAAATTTGGCCCACT 57.078 38.095 17.90 0.00 0.00 4.00
369 370 3.252944 CCATGTTTTCAAATTTGGCCCAC 59.747 43.478 17.90 10.18 0.00 4.61
370 371 3.137176 TCCATGTTTTCAAATTTGGCCCA 59.863 39.130 17.90 10.03 0.00 5.36
371 372 3.501828 GTCCATGTTTTCAAATTTGGCCC 59.498 43.478 17.90 5.00 0.00 5.80
372 373 4.133078 TGTCCATGTTTTCAAATTTGGCC 58.867 39.130 17.90 0.00 0.00 5.36
373 374 5.747951 TTGTCCATGTTTTCAAATTTGGC 57.252 34.783 17.90 7.08 0.00 4.52
374 375 9.583765 AAAAATTGTCCATGTTTTCAAATTTGG 57.416 25.926 17.90 0.14 30.56 3.28
405 406 9.482627 GTTCGTATCTCCAAAAGATTATCAGAT 57.517 33.333 0.00 0.00 42.30 2.90
406 407 8.696374 AGTTCGTATCTCCAAAAGATTATCAGA 58.304 33.333 0.00 0.00 42.30 3.27
407 408 8.879342 AGTTCGTATCTCCAAAAGATTATCAG 57.121 34.615 0.00 0.00 42.30 2.90
408 409 9.667107 AAAGTTCGTATCTCCAAAAGATTATCA 57.333 29.630 0.00 0.00 42.30 2.15
412 413 8.846211 TGAAAAAGTTCGTATCTCCAAAAGATT 58.154 29.630 0.00 0.00 39.85 2.40
413 414 8.391075 TGAAAAAGTTCGTATCTCCAAAAGAT 57.609 30.769 0.00 0.00 41.10 2.40
414 415 7.795482 TGAAAAAGTTCGTATCTCCAAAAGA 57.205 32.000 0.00 0.00 36.46 2.52
415 416 8.850454 TTTGAAAAAGTTCGTATCTCCAAAAG 57.150 30.769 0.00 0.00 36.46 2.27
416 417 9.810545 ATTTTGAAAAAGTTCGTATCTCCAAAA 57.189 25.926 0.00 0.00 36.46 2.44
417 418 9.810545 AATTTTGAAAAAGTTCGTATCTCCAAA 57.189 25.926 0.00 0.00 36.46 3.28
419 420 9.887406 GTAATTTTGAAAAAGTTCGTATCTCCA 57.113 29.630 0.00 0.00 36.46 3.86
420 421 9.338291 GGTAATTTTGAAAAAGTTCGTATCTCC 57.662 33.333 0.00 0.00 36.46 3.71
421 422 9.047871 CGGTAATTTTGAAAAAGTTCGTATCTC 57.952 33.333 0.00 0.00 36.46 2.75
422 423 8.776470 TCGGTAATTTTGAAAAAGTTCGTATCT 58.224 29.630 0.00 0.00 36.46 1.98
423 424 8.938047 TCGGTAATTTTGAAAAAGTTCGTATC 57.062 30.769 0.00 0.00 36.46 2.24
424 425 9.172820 GTTCGGTAATTTTGAAAAAGTTCGTAT 57.827 29.630 0.00 0.00 36.46 3.06
425 426 8.397148 AGTTCGGTAATTTTGAAAAAGTTCGTA 58.603 29.630 0.00 0.00 36.46 3.43
426 427 7.252708 AGTTCGGTAATTTTGAAAAAGTTCGT 58.747 30.769 0.00 0.00 36.46 3.85
427 428 7.642586 AGAGTTCGGTAATTTTGAAAAAGTTCG 59.357 33.333 0.00 0.00 36.46 3.95
428 429 8.851960 AGAGTTCGGTAATTTTGAAAAAGTTC 57.148 30.769 0.00 0.00 0.00 3.01
429 430 9.647797 AAAGAGTTCGGTAATTTTGAAAAAGTT 57.352 25.926 0.00 0.00 0.00 2.66
430 431 9.647797 AAAAGAGTTCGGTAATTTTGAAAAAGT 57.352 25.926 0.00 0.00 0.00 2.66
437 438 9.823979 CGTTTTTAAAAGAGTTCGGTAATTTTG 57.176 29.630 0.14 0.00 0.00 2.44
438 439 8.533965 GCGTTTTTAAAAGAGTTCGGTAATTTT 58.466 29.630 0.14 0.00 0.00 1.82
439 440 7.096925 CGCGTTTTTAAAAGAGTTCGGTAATTT 60.097 33.333 0.00 0.00 0.00 1.82
440 441 6.357766 CGCGTTTTTAAAAGAGTTCGGTAATT 59.642 34.615 0.00 0.00 0.00 1.40
441 442 5.847515 CGCGTTTTTAAAAGAGTTCGGTAAT 59.152 36.000 0.00 0.00 0.00 1.89
442 443 5.006165 TCGCGTTTTTAAAAGAGTTCGGTAA 59.994 36.000 5.77 0.00 0.00 2.85
443 444 4.505922 TCGCGTTTTTAAAAGAGTTCGGTA 59.494 37.500 5.77 0.00 0.00 4.02
444 445 3.309410 TCGCGTTTTTAAAAGAGTTCGGT 59.691 39.130 5.77 0.00 0.00 4.69
445 446 3.864163 TCGCGTTTTTAAAAGAGTTCGG 58.136 40.909 5.77 0.00 0.00 4.30
446 447 6.271593 CAATTCGCGTTTTTAAAAGAGTTCG 58.728 36.000 5.77 4.51 0.00 3.95
447 448 6.415573 TCCAATTCGCGTTTTTAAAAGAGTTC 59.584 34.615 5.77 0.00 0.00 3.01
448 449 6.267070 TCCAATTCGCGTTTTTAAAAGAGTT 58.733 32.000 5.77 0.00 0.00 3.01
449 450 5.823353 TCCAATTCGCGTTTTTAAAAGAGT 58.177 33.333 5.77 0.00 0.00 3.24
450 451 6.741448 TTCCAATTCGCGTTTTTAAAAGAG 57.259 33.333 5.77 1.07 0.00 2.85
451 452 7.701809 AATTCCAATTCGCGTTTTTAAAAGA 57.298 28.000 5.77 0.00 0.00 2.52
452 453 7.848539 ACAAATTCCAATTCGCGTTTTTAAAAG 59.151 29.630 5.77 0.00 0.00 2.27
453 454 7.636359 CACAAATTCCAATTCGCGTTTTTAAAA 59.364 29.630 5.77 0.00 0.00 1.52
454 455 7.010183 TCACAAATTCCAATTCGCGTTTTTAAA 59.990 29.630 5.77 0.00 0.00 1.52
455 456 6.475727 TCACAAATTCCAATTCGCGTTTTTAA 59.524 30.769 5.77 0.00 0.00 1.52
456 457 5.977725 TCACAAATTCCAATTCGCGTTTTTA 59.022 32.000 5.77 0.00 0.00 1.52
457 458 4.806247 TCACAAATTCCAATTCGCGTTTTT 59.194 33.333 5.77 0.00 0.00 1.94
458 459 4.363999 TCACAAATTCCAATTCGCGTTTT 58.636 34.783 5.77 0.00 0.00 2.43
459 460 3.971150 TCACAAATTCCAATTCGCGTTT 58.029 36.364 5.77 0.00 0.00 3.60
460 461 3.634568 TCACAAATTCCAATTCGCGTT 57.365 38.095 5.77 0.00 0.00 4.84
461 462 3.243234 TGTTCACAAATTCCAATTCGCGT 60.243 39.130 5.77 0.00 0.00 6.01
462 463 3.304257 TGTTCACAAATTCCAATTCGCG 58.696 40.909 0.00 0.00 0.00 5.87
463 464 4.981674 TCTTGTTCACAAATTCCAATTCGC 59.018 37.500 0.00 0.00 35.15 4.70
464 465 7.409661 CGAATCTTGTTCACAAATTCCAATTCG 60.410 37.037 14.89 13.10 35.15 3.34
465 466 7.594758 TCGAATCTTGTTCACAAATTCCAATTC 59.405 33.333 14.89 8.35 35.15 2.17
466 467 7.432869 TCGAATCTTGTTCACAAATTCCAATT 58.567 30.769 14.89 0.00 35.15 2.32
467 468 6.980593 TCGAATCTTGTTCACAAATTCCAAT 58.019 32.000 14.89 0.00 35.15 3.16
468 469 6.384258 TCGAATCTTGTTCACAAATTCCAA 57.616 33.333 14.89 7.15 35.15 3.53
469 470 6.384258 TTCGAATCTTGTTCACAAATTCCA 57.616 33.333 0.00 6.49 35.15 3.53
470 471 7.692908 TTTTCGAATCTTGTTCACAAATTCC 57.307 32.000 0.00 0.27 35.15 3.01
472 473 8.901748 CGTATTTTCGAATCTTGTTCACAAATT 58.098 29.630 0.00 0.00 35.15 1.82
473 474 8.286800 TCGTATTTTCGAATCTTGTTCACAAAT 58.713 29.630 0.00 0.00 36.89 2.32
474 475 7.631822 TCGTATTTTCGAATCTTGTTCACAAA 58.368 30.769 0.00 0.00 36.89 2.83
475 476 7.179927 TCGTATTTTCGAATCTTGTTCACAA 57.820 32.000 0.00 0.00 36.89 3.33
476 477 6.772770 TCGTATTTTCGAATCTTGTTCACA 57.227 33.333 0.00 0.00 36.89 3.58
531 532 8.753175 CCCGTAAATTTAAAATGTTGTTTCGAA 58.247 29.630 0.00 0.00 0.00 3.71
532 533 8.133627 TCCCGTAAATTTAAAATGTTGTTTCGA 58.866 29.630 0.00 0.00 0.00 3.71
533 534 8.283340 TCCCGTAAATTTAAAATGTTGTTTCG 57.717 30.769 0.00 0.00 0.00 3.46
536 537 8.828644 GGTTTCCCGTAAATTTAAAATGTTGTT 58.171 29.630 0.00 0.00 0.00 2.83
537 538 7.441760 GGGTTTCCCGTAAATTTAAAATGTTGT 59.558 33.333 0.00 0.00 32.13 3.32
538 539 7.798801 GGGTTTCCCGTAAATTTAAAATGTTG 58.201 34.615 0.00 0.00 32.13 3.33
539 540 7.966246 GGGTTTCCCGTAAATTTAAAATGTT 57.034 32.000 0.00 0.00 32.13 2.71
583 584 5.058734 GCACGCGAATCGATTTTTCTTTTTA 59.941 36.000 15.93 0.00 41.67 1.52
589 590 0.825298 CGCACGCGAATCGATTTTTC 59.175 50.000 15.93 0.00 42.83 2.29
590 591 1.125847 GCGCACGCGAATCGATTTTT 61.126 50.000 15.93 0.00 42.83 1.94
591 592 1.580132 GCGCACGCGAATCGATTTT 60.580 52.632 15.93 0.00 42.83 1.82
622 624 1.335142 CGTTATCTCTCGCTAGCACCC 60.335 57.143 16.45 0.00 0.00 4.61
638 640 2.279069 TACCCCGTTTCCCGCGTTA 61.279 57.895 4.92 0.00 34.38 3.18
672 674 1.578206 AAGAAGAAGAAAGGGCGCGC 61.578 55.000 25.94 25.94 0.00 6.86
703 705 2.052690 GCGGCAGAGTACTGGAGGA 61.053 63.158 0.00 0.00 43.62 3.71
704 706 2.496817 GCGGCAGAGTACTGGAGG 59.503 66.667 0.00 0.00 43.62 4.30
706 708 1.888436 CTTGGCGGCAGAGTACTGGA 61.888 60.000 12.87 0.00 43.62 3.86
707 709 1.448540 CTTGGCGGCAGAGTACTGG 60.449 63.158 12.87 0.00 43.62 4.00
709 711 2.111999 TTGCTTGGCGGCAGAGTACT 62.112 55.000 12.87 0.00 43.39 2.73
710 712 1.026718 ATTGCTTGGCGGCAGAGTAC 61.027 55.000 12.87 1.79 43.39 2.73
787 830 2.443016 ATCCCGGAGAGCTTCGCT 60.443 61.111 0.73 0.00 43.88 4.93
816 859 2.026879 CAACCAAACGGGCGTTGG 59.973 61.111 10.63 10.63 42.05 3.77
923 967 1.469126 ATTCGACGCGGAAATCGACG 61.469 55.000 17.58 6.90 46.41 5.12
935 990 3.729526 ACAGAGCAATTCAATTCGACG 57.270 42.857 0.00 0.00 0.00 5.12
948 1003 5.798132 ACAAGATTCAAGACATACAGAGCA 58.202 37.500 0.00 0.00 0.00 4.26
956 1011 4.201753 CGATGCGAACAAGATTCAAGACAT 60.202 41.667 0.00 0.00 0.00 3.06
959 1014 3.584834 TCGATGCGAACAAGATTCAAGA 58.415 40.909 0.00 0.00 31.06 3.02
961 1016 4.154015 ACAATCGATGCGAACAAGATTCAA 59.846 37.500 0.00 0.00 39.99 2.69
963 1018 4.264543 ACAATCGATGCGAACAAGATTC 57.735 40.909 0.00 0.00 39.99 2.52
1137 1212 3.070159 CACGGGATCCAGAACTCACATAT 59.930 47.826 19.55 0.00 0.00 1.78
1164 1244 0.590195 CACAGAGCACCAGCAAAGAC 59.410 55.000 0.00 0.00 45.49 3.01
1169 1249 4.240103 ACGCACAGAGCACCAGCA 62.240 61.111 0.00 0.00 46.13 4.41
1172 1252 3.519973 CTCCACGCACAGAGCACCA 62.520 63.158 0.00 0.00 46.13 4.17
1173 1253 2.740055 CTCCACGCACAGAGCACC 60.740 66.667 0.00 0.00 46.13 5.01
1211 1296 2.403252 AGATTTAGCACCCGTTCAGG 57.597 50.000 0.00 0.00 40.63 3.86
1223 1308 4.142293 GCCCTGGAAAGCAAGAAGATTTAG 60.142 45.833 0.00 0.00 35.66 1.85
1289 1383 0.892358 TCCGTCAGAAGGTAGTGCGT 60.892 55.000 1.93 0.00 0.00 5.24
1370 1464 6.292923 TGTTAAACAGCTTCTTAGGTAGCAA 58.707 36.000 6.26 0.00 38.15 3.91
1540 1635 0.823356 ACACCAATGAGCACCACCAC 60.823 55.000 0.00 0.00 0.00 4.16
1573 1672 6.580788 AGAGTCAGTAATCATGACCAATCAG 58.419 40.000 0.00 0.00 46.68 2.90
1599 1701 9.546428 CATCATCAGGTTTACATTGTACATAGA 57.454 33.333 0.00 0.00 0.00 1.98
1609 1712 5.440610 GGGACTTCATCATCAGGTTTACAT 58.559 41.667 0.00 0.00 0.00 2.29
1626 1729 0.043940 AGCATCCTCTCTGGGGACTT 59.956 55.000 0.00 0.00 35.51 3.01
1667 1770 3.609853 CAGCAGGTTAAGGCAGTAATCA 58.390 45.455 0.00 0.00 0.00 2.57
1675 1778 0.678048 CCAGTCCAGCAGGTTAAGGC 60.678 60.000 0.00 0.00 35.89 4.35
1679 1782 1.923395 CCCCCAGTCCAGCAGGTTA 60.923 63.158 0.00 0.00 35.89 2.85
1697 1800 2.482374 GACAGCACATTGGCGCTC 59.518 61.111 7.64 0.00 35.96 5.03
1885 1988 2.022934 GACCTACCAGTCGGTTAGAGG 58.977 57.143 0.00 0.00 46.31 3.69
1965 2075 6.203647 TGCAGAATGAAAATAATGATCAGCG 58.796 36.000 0.09 0.00 39.69 5.18
1975 2085 3.872696 TCTCCGCTGCAGAATGAAAATA 58.127 40.909 20.43 0.00 39.69 1.40
2116 2226 1.439353 GCCCATGGTATGTCTGCACG 61.439 60.000 11.73 0.00 0.00 5.34
2140 2250 1.002087 GTAAGTCCACACACCTCCTGG 59.998 57.143 0.00 0.00 39.83 4.45
2160 2270 0.176680 CTTCCCTGATCCTGACCACG 59.823 60.000 0.00 0.00 0.00 4.94
2177 2287 1.151450 CACCACTGGCCAACCTCTT 59.849 57.895 7.01 0.00 36.63 2.85
2181 2291 3.444818 TTCCCACCACTGGCCAACC 62.445 63.158 7.01 0.00 36.00 3.77
2183 2293 2.197324 GTTCCCACCACTGGCCAA 59.803 61.111 7.01 0.00 36.00 4.52
2288 2398 1.898574 CCTTCACGGCAGCCAAGTT 60.899 57.895 13.30 0.00 0.00 2.66
2366 2476 4.341806 TGTGTTCCAAAACTTGATGCATCT 59.658 37.500 26.32 4.61 36.30 2.90
2448 2558 4.567971 CAGCTCTCTGTCATTCTTGTTCT 58.432 43.478 0.00 0.00 35.61 3.01
2485 2595 1.070821 CGAGCTGATTCTGCGTGAAA 58.929 50.000 9.53 0.00 38.29 2.69
2555 2665 3.460857 CATGTAGAGGACAGGGTAAGC 57.539 52.381 0.00 0.00 42.79 3.09
2584 2694 5.588958 AAAAAGCATAGGGAGCAAAGATC 57.411 39.130 0.00 0.00 0.00 2.75
2702 2825 8.900781 GGACTAGAGTACACATACATGAGTTTA 58.099 37.037 0.00 0.00 33.68 2.01
2703 2826 7.415318 CGGACTAGAGTACACATACATGAGTTT 60.415 40.741 0.00 0.00 33.68 2.66
2704 2827 6.038382 CGGACTAGAGTACACATACATGAGTT 59.962 42.308 0.00 0.00 33.68 3.01
2705 2828 5.527951 CGGACTAGAGTACACATACATGAGT 59.472 44.000 0.00 0.00 35.76 3.41
2706 2829 5.561145 GCGGACTAGAGTACACATACATGAG 60.561 48.000 0.00 0.00 33.30 2.90
2707 2830 4.275196 GCGGACTAGAGTACACATACATGA 59.725 45.833 0.00 0.00 33.30 3.07
2708 2831 4.276183 AGCGGACTAGAGTACACATACATG 59.724 45.833 0.00 0.00 33.30 3.21
2709 2832 4.462133 AGCGGACTAGAGTACACATACAT 58.538 43.478 0.00 0.00 33.30 2.29
2710 2833 3.875727 GAGCGGACTAGAGTACACATACA 59.124 47.826 0.00 0.00 33.30 2.29
2711 2834 3.250521 GGAGCGGACTAGAGTACACATAC 59.749 52.174 0.00 0.00 0.00 2.39
2712 2835 3.136077 AGGAGCGGACTAGAGTACACATA 59.864 47.826 0.00 0.00 0.00 2.29
2713 2836 2.092321 AGGAGCGGACTAGAGTACACAT 60.092 50.000 0.00 0.00 0.00 3.21
2714 2837 1.281287 AGGAGCGGACTAGAGTACACA 59.719 52.381 0.00 0.00 0.00 3.72
2715 2838 1.671845 CAGGAGCGGACTAGAGTACAC 59.328 57.143 0.00 0.00 0.00 2.90
2716 2839 1.558294 TCAGGAGCGGACTAGAGTACA 59.442 52.381 0.00 0.00 0.00 2.90
2717 2840 2.328819 TCAGGAGCGGACTAGAGTAC 57.671 55.000 0.00 0.00 0.00 2.73
2718 2841 2.706723 AGATCAGGAGCGGACTAGAGTA 59.293 50.000 0.00 0.00 0.00 2.59
2719 2842 1.493022 AGATCAGGAGCGGACTAGAGT 59.507 52.381 0.00 0.00 0.00 3.24
2720 2843 2.270352 AGATCAGGAGCGGACTAGAG 57.730 55.000 0.00 0.00 0.00 2.43
2721 2844 2.738587 AAGATCAGGAGCGGACTAGA 57.261 50.000 0.00 0.00 0.00 2.43
2722 2845 3.254657 CCTAAAGATCAGGAGCGGACTAG 59.745 52.174 0.00 0.00 34.91 2.57
2723 2846 3.117625 TCCTAAAGATCAGGAGCGGACTA 60.118 47.826 0.00 0.00 37.27 2.59
2724 2847 2.035632 CCTAAAGATCAGGAGCGGACT 58.964 52.381 0.00 0.00 34.91 3.85
2725 2848 2.032620 TCCTAAAGATCAGGAGCGGAC 58.967 52.381 0.00 0.00 37.27 4.79
2726 2849 2.454336 TCCTAAAGATCAGGAGCGGA 57.546 50.000 0.00 0.00 37.27 5.54
2735 2858 6.641738 GCGAGGGCTCAGATCCTAAAGATC 62.642 54.167 0.00 0.00 43.15 2.75
2736 2859 2.896685 CGAGGGCTCAGATCCTAAAGAT 59.103 50.000 0.00 0.00 38.17 2.40
2737 2860 2.311463 CGAGGGCTCAGATCCTAAAGA 58.689 52.381 0.00 0.00 32.74 2.52
2738 2861 1.270041 GCGAGGGCTCAGATCCTAAAG 60.270 57.143 0.00 0.00 35.83 1.85
2739 2862 0.753262 GCGAGGGCTCAGATCCTAAA 59.247 55.000 0.00 0.00 35.83 1.85
2740 2863 1.115930 GGCGAGGGCTCAGATCCTAA 61.116 60.000 0.00 0.00 39.81 2.69
2741 2864 1.531840 GGCGAGGGCTCAGATCCTA 60.532 63.158 0.00 0.00 39.81 2.94
2742 2865 2.841988 GGCGAGGGCTCAGATCCT 60.842 66.667 0.00 0.00 39.81 3.24
2743 2866 3.934962 GGGCGAGGGCTCAGATCC 61.935 72.222 0.00 0.00 40.32 3.36
2763 2886 3.901797 AACTAGGTGGCACGCAGGC 62.902 63.158 12.17 0.00 43.02 4.85
2764 2887 1.741770 GAACTAGGTGGCACGCAGG 60.742 63.158 12.17 4.39 43.02 4.85
2765 2888 2.094659 CGAACTAGGTGGCACGCAG 61.095 63.158 12.17 13.04 43.02 5.18
2766 2889 2.048597 CGAACTAGGTGGCACGCA 60.049 61.111 12.17 0.20 43.02 5.24
2767 2890 2.813908 CCGAACTAGGTGGCACGC 60.814 66.667 12.17 4.74 38.67 5.34
2768 2891 2.125673 CCCGAACTAGGTGGCACG 60.126 66.667 12.17 0.00 0.00 5.34
2769 2892 2.436115 GCCCGAACTAGGTGGCAC 60.436 66.667 9.70 9.70 43.46 5.01
2770 2893 2.606519 AGCCCGAACTAGGTGGCA 60.607 61.111 11.47 0.00 46.45 4.92
2771 2894 2.187163 GAGCCCGAACTAGGTGGC 59.813 66.667 0.73 0.73 44.35 5.01
2772 2895 2.732619 GGGAGCCCGAACTAGGTGG 61.733 68.421 0.00 0.00 0.00 4.61
2773 2896 1.265454 AAGGGAGCCCGAACTAGGTG 61.265 60.000 0.00 0.00 41.95 4.00
2774 2897 1.080538 AAGGGAGCCCGAACTAGGT 59.919 57.895 0.00 0.00 41.95 3.08
2775 2898 1.265454 ACAAGGGAGCCCGAACTAGG 61.265 60.000 0.00 0.00 41.95 3.02
2776 2899 1.481871 TACAAGGGAGCCCGAACTAG 58.518 55.000 0.00 0.00 41.95 2.57
2777 2900 1.551883 GTTACAAGGGAGCCCGAACTA 59.448 52.381 0.00 0.00 41.95 2.24
2778 2901 0.323957 GTTACAAGGGAGCCCGAACT 59.676 55.000 0.00 0.00 41.95 3.01
2779 2902 0.323957 AGTTACAAGGGAGCCCGAAC 59.676 55.000 0.00 4.12 41.95 3.95
2780 2903 1.002773 GAAGTTACAAGGGAGCCCGAA 59.997 52.381 0.00 0.00 41.95 4.30
2781 2904 0.611714 GAAGTTACAAGGGAGCCCGA 59.388 55.000 0.00 0.00 41.95 5.14
2782 2905 0.613777 AGAAGTTACAAGGGAGCCCG 59.386 55.000 0.00 0.00 41.95 6.13
2783 2906 2.224793 ACAAGAAGTTACAAGGGAGCCC 60.225 50.000 0.00 0.00 0.00 5.19
2784 2907 3.141767 ACAAGAAGTTACAAGGGAGCC 57.858 47.619 0.00 0.00 0.00 4.70
2785 2908 7.916914 TTTATACAAGAAGTTACAAGGGAGC 57.083 36.000 0.00 0.00 0.00 4.70
2787 2910 9.802039 ACAATTTATACAAGAAGTTACAAGGGA 57.198 29.630 0.00 0.00 0.00 4.20
2795 2918 8.932791 CGGACTGTACAATTTATACAAGAAGTT 58.067 33.333 0.00 0.00 32.27 2.66
2796 2919 7.064253 GCGGACTGTACAATTTATACAAGAAGT 59.936 37.037 0.00 0.00 32.27 3.01
2797 2920 7.064134 TGCGGACTGTACAATTTATACAAGAAG 59.936 37.037 0.00 0.00 32.27 2.85
2798 2921 6.874664 TGCGGACTGTACAATTTATACAAGAA 59.125 34.615 0.00 0.00 32.27 2.52
2799 2922 6.399743 TGCGGACTGTACAATTTATACAAGA 58.600 36.000 0.00 0.00 32.27 3.02
2800 2923 6.656314 TGCGGACTGTACAATTTATACAAG 57.344 37.500 0.00 0.36 32.27 3.16
2801 2924 6.259167 GGATGCGGACTGTACAATTTATACAA 59.741 38.462 0.00 0.00 32.27 2.41
2802 2925 5.756347 GGATGCGGACTGTACAATTTATACA 59.244 40.000 0.00 0.57 0.00 2.29
2803 2926 5.756347 TGGATGCGGACTGTACAATTTATAC 59.244 40.000 0.00 0.00 0.00 1.47
2804 2927 5.919755 TGGATGCGGACTGTACAATTTATA 58.080 37.500 0.00 0.00 0.00 0.98
2805 2928 4.776349 TGGATGCGGACTGTACAATTTAT 58.224 39.130 0.00 0.00 0.00 1.40
2806 2929 4.209307 TGGATGCGGACTGTACAATTTA 57.791 40.909 0.00 0.00 0.00 1.40
2807 2930 3.066291 TGGATGCGGACTGTACAATTT 57.934 42.857 0.00 0.00 0.00 1.82
2808 2931 2.779755 TGGATGCGGACTGTACAATT 57.220 45.000 0.00 0.00 0.00 2.32
2809 2932 2.632377 CTTGGATGCGGACTGTACAAT 58.368 47.619 0.00 0.00 0.00 2.71
2810 2933 1.338674 CCTTGGATGCGGACTGTACAA 60.339 52.381 0.00 0.00 0.00 2.41
2811 2934 0.249120 CCTTGGATGCGGACTGTACA 59.751 55.000 0.00 0.00 0.00 2.90
2812 2935 1.090052 GCCTTGGATGCGGACTGTAC 61.090 60.000 0.00 0.00 0.00 2.90
2813 2936 1.220749 GCCTTGGATGCGGACTGTA 59.779 57.895 0.00 0.00 0.00 2.74
2814 2937 2.045926 GCCTTGGATGCGGACTGT 60.046 61.111 0.00 0.00 0.00 3.55
2815 2938 1.033746 ATTGCCTTGGATGCGGACTG 61.034 55.000 0.00 0.00 0.00 3.51
2816 2939 0.546122 TATTGCCTTGGATGCGGACT 59.454 50.000 0.00 0.00 0.00 3.85
2817 2940 0.663153 GTATTGCCTTGGATGCGGAC 59.337 55.000 0.00 0.00 0.00 4.79
2818 2941 0.254462 TGTATTGCCTTGGATGCGGA 59.746 50.000 0.00 0.00 0.00 5.54
2819 2942 0.381801 GTGTATTGCCTTGGATGCGG 59.618 55.000 0.00 0.00 0.00 5.69
2820 2943 1.064505 CTGTGTATTGCCTTGGATGCG 59.935 52.381 0.00 0.00 0.00 4.73
2821 2944 2.357009 CTCTGTGTATTGCCTTGGATGC 59.643 50.000 0.00 0.00 0.00 3.91
2822 2945 2.357009 GCTCTGTGTATTGCCTTGGATG 59.643 50.000 0.00 0.00 0.00 3.51
2823 2946 2.025981 TGCTCTGTGTATTGCCTTGGAT 60.026 45.455 0.00 0.00 0.00 3.41
2824 2947 1.350684 TGCTCTGTGTATTGCCTTGGA 59.649 47.619 0.00 0.00 0.00 3.53
2825 2948 1.825090 TGCTCTGTGTATTGCCTTGG 58.175 50.000 0.00 0.00 0.00 3.61
2826 2949 3.921119 TTTGCTCTGTGTATTGCCTTG 57.079 42.857 0.00 0.00 0.00 3.61
2827 2950 4.768968 AGAATTTGCTCTGTGTATTGCCTT 59.231 37.500 0.00 0.00 0.00 4.35
2828 2951 4.338879 AGAATTTGCTCTGTGTATTGCCT 58.661 39.130 0.00 0.00 0.00 4.75
2829 2952 4.708726 AGAATTTGCTCTGTGTATTGCC 57.291 40.909 0.00 0.00 0.00 4.52
2830 2953 6.132056 CGATAGAATTTGCTCTGTGTATTGC 58.868 40.000 0.00 0.00 39.76 3.56
2831 2954 6.132056 GCGATAGAATTTGCTCTGTGTATTG 58.868 40.000 0.00 0.00 39.76 1.90
2832 2955 5.237344 GGCGATAGAATTTGCTCTGTGTATT 59.763 40.000 0.00 0.00 39.76 1.89
2833 2956 4.752101 GGCGATAGAATTTGCTCTGTGTAT 59.248 41.667 0.00 0.00 39.76 2.29
2834 2957 4.119862 GGCGATAGAATTTGCTCTGTGTA 58.880 43.478 0.00 0.00 39.76 2.90
2835 2958 2.939103 GGCGATAGAATTTGCTCTGTGT 59.061 45.455 0.00 0.00 39.76 3.72
2836 2959 3.201290 AGGCGATAGAATTTGCTCTGTG 58.799 45.455 0.00 0.00 39.76 3.66
2837 2960 3.550437 AGGCGATAGAATTTGCTCTGT 57.450 42.857 0.00 0.00 39.76 3.41
2838 2961 5.053145 AGTTAGGCGATAGAATTTGCTCTG 58.947 41.667 0.00 0.00 39.76 3.35
2839 2962 5.069781 AGAGTTAGGCGATAGAATTTGCTCT 59.930 40.000 0.00 0.00 39.76 4.09
2840 2963 5.176590 CAGAGTTAGGCGATAGAATTTGCTC 59.823 44.000 0.00 0.00 39.76 4.26
2841 2964 5.053145 CAGAGTTAGGCGATAGAATTTGCT 58.947 41.667 0.00 0.00 39.76 3.91
2842 2965 5.050490 TCAGAGTTAGGCGATAGAATTTGC 58.950 41.667 0.00 0.00 39.76 3.68
2843 2966 6.146837 CCATCAGAGTTAGGCGATAGAATTTG 59.853 42.308 0.00 0.00 39.76 2.32
2844 2967 6.183361 ACCATCAGAGTTAGGCGATAGAATTT 60.183 38.462 0.00 0.00 39.76 1.82
2845 2968 5.305644 ACCATCAGAGTTAGGCGATAGAATT 59.694 40.000 0.00 0.00 39.76 2.17
2846 2969 4.835615 ACCATCAGAGTTAGGCGATAGAAT 59.164 41.667 0.00 0.00 39.76 2.40
2847 2970 4.215908 ACCATCAGAGTTAGGCGATAGAA 58.784 43.478 0.00 0.00 39.76 2.10
2848 2971 3.833732 ACCATCAGAGTTAGGCGATAGA 58.166 45.455 0.00 0.00 39.76 1.98
2849 2972 4.302455 CAACCATCAGAGTTAGGCGATAG 58.698 47.826 0.00 0.00 0.00 2.08
2850 2973 3.492656 GCAACCATCAGAGTTAGGCGATA 60.493 47.826 0.00 0.00 0.00 2.92
2851 2974 2.743183 GCAACCATCAGAGTTAGGCGAT 60.743 50.000 0.00 0.00 0.00 4.58
2852 2975 1.405526 GCAACCATCAGAGTTAGGCGA 60.406 52.381 0.00 0.00 0.00 5.54
2853 2976 1.009829 GCAACCATCAGAGTTAGGCG 58.990 55.000 0.00 0.00 0.00 5.52
2854 2977 1.740025 GTGCAACCATCAGAGTTAGGC 59.260 52.381 0.00 0.00 0.00 3.93
2855 2978 3.005554 CTGTGCAACCATCAGAGTTAGG 58.994 50.000 0.00 0.00 34.36 2.69
2856 2979 3.434641 CACTGTGCAACCATCAGAGTTAG 59.565 47.826 8.15 0.00 36.13 2.34
2857 2980 3.402110 CACTGTGCAACCATCAGAGTTA 58.598 45.455 8.15 0.00 36.13 2.24
2858 2981 2.224606 CACTGTGCAACCATCAGAGTT 58.775 47.619 8.15 0.00 36.13 3.01
2859 2982 1.544093 CCACTGTGCAACCATCAGAGT 60.544 52.381 8.15 0.00 38.40 3.24
2860 2983 1.162698 CCACTGTGCAACCATCAGAG 58.837 55.000 8.15 0.62 34.36 3.35
2861 2984 0.890542 GCCACTGTGCAACCATCAGA 60.891 55.000 8.15 0.00 34.36 3.27
2862 2985 1.174078 TGCCACTGTGCAACCATCAG 61.174 55.000 1.29 0.00 38.56 2.90
2863 2986 0.540133 ATGCCACTGTGCAACCATCA 60.540 50.000 1.29 0.00 45.84 3.07
2864 2987 0.171903 GATGCCACTGTGCAACCATC 59.828 55.000 1.29 7.55 45.84 3.51
2865 2988 0.251474 AGATGCCACTGTGCAACCAT 60.251 50.000 1.29 2.12 45.84 3.55
2866 2989 1.151221 AGATGCCACTGTGCAACCA 59.849 52.632 1.29 0.00 45.84 3.67
2920 3043 2.363683 GGAGCATCAGAAGTCCCAAAG 58.636 52.381 0.00 0.00 36.25 2.77
2923 3046 0.614697 TCGGAGCATCAGAAGTCCCA 60.615 55.000 0.00 0.00 36.06 4.37
2972 3110 6.715264 TCTCTCTAGCGGATGTGATTATAACA 59.285 38.462 0.00 0.00 0.00 2.41
2977 3115 5.133941 ACTTCTCTCTAGCGGATGTGATTA 58.866 41.667 0.00 0.00 0.00 1.75
3007 3145 7.453752 AGACTTTGGTGGTAGTTCAGAGTTATA 59.546 37.037 0.00 0.00 0.00 0.98
3048 3197 3.775661 AGTGGACGGTTTTGAAGTTTG 57.224 42.857 0.00 0.00 0.00 2.93
3196 3490 0.716108 GACACATGCTTTCGAGACGG 59.284 55.000 0.00 0.00 0.00 4.79
3225 3519 3.126001 TGAGAGGCAACAGTTCGAATT 57.874 42.857 0.00 0.00 41.41 2.17
3336 3642 6.000219 ACAGAACATGATAGCTTCAAGTTGT 59.000 36.000 17.89 13.57 44.11 3.32
3348 3654 7.619965 TCAAATAGTGGTCACAGAACATGATA 58.380 34.615 0.00 0.00 29.64 2.15


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.