Multiple sequence alignment - TraesCS6A01G083200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G083200 chr6A 100.000 7145 0 0 1 7145 51946908 51954052 0.000000e+00 13195.0
1 TraesCS6A01G083200 chr6A 84.061 847 82 25 4155 4968 4927632 4926806 0.000000e+00 767.0
2 TraesCS6A01G083200 chr6A 82.363 584 69 20 5165 5740 214074194 214074751 1.800000e-130 477.0
3 TraesCS6A01G083200 chr6A 97.600 250 6 0 183 432 19003926 19004175 5.120000e-116 429.0
4 TraesCS6A01G083200 chr6A 97.189 249 7 0 183 431 18968149 18968397 8.570000e-114 422.0
5 TraesCS6A01G083200 chr6A 84.553 369 42 8 4604 4970 463743541 463743896 1.140000e-92 351.0
6 TraesCS6A01G083200 chr6A 80.851 470 60 16 2974 3428 51950335 51949881 6.860000e-90 342.0
7 TraesCS6A01G083200 chr6A 83.740 369 45 8 4604 4970 47592054 47591699 1.150000e-87 335.0
8 TraesCS6A01G083200 chr6A 83.692 325 37 12 4155 4476 463743173 463743484 7.010000e-75 292.0
9 TraesCS6A01G083200 chr6B 89.722 3094 180 56 2966 5967 96402621 96399574 0.000000e+00 3825.0
10 TraesCS6A01G083200 chr6B 84.653 808 83 20 6046 6822 649826475 649827272 0.000000e+00 767.0
11 TraesCS6A01G083200 chr6B 82.277 852 101 24 4149 4970 575573753 575572922 0.000000e+00 691.0
12 TraesCS6A01G083200 chr6B 79.227 1165 97 64 904 1932 96404812 96403657 0.000000e+00 676.0
13 TraesCS6A01G083200 chr6B 79.589 730 56 39 2101 2800 96403528 96402862 3.060000e-118 436.0
14 TraesCS6A01G083200 chr6B 84.011 369 44 8 4604 4970 302279028 302279383 2.470000e-89 340.0
15 TraesCS6A01G083200 chr6B 84.011 369 44 8 4604 4970 713227422 713227067 2.470000e-89 340.0
16 TraesCS6A01G083200 chr6B 83.951 324 38 9 4155 4476 302278660 302278971 1.510000e-76 298.0
17 TraesCS6A01G083200 chr6B 87.266 267 16 11 574 831 96406675 96406418 9.070000e-74 289.0
18 TraesCS6A01G083200 chr6B 78.119 489 61 26 2974 3428 96402137 96402613 1.180000e-67 268.0
19 TraesCS6A01G083200 chr6B 91.971 137 7 2 434 569 96406853 96406720 9.460000e-44 189.0
20 TraesCS6A01G083200 chr6B 92.593 108 7 1 1 108 96407041 96406935 3.450000e-33 154.0
21 TraesCS6A01G083200 chr6D 88.451 3169 182 78 2962 6019 41522352 41525447 0.000000e+00 3655.0
22 TraesCS6A01G083200 chr6D 85.396 808 78 22 6047 6825 450907584 450906788 0.000000e+00 802.0
23 TraesCS6A01G083200 chr6D 85.025 808 82 20 6047 6825 305746980 305746183 0.000000e+00 785.0
24 TraesCS6A01G083200 chr6D 83.353 853 91 22 4149 4970 225662778 225661946 0.000000e+00 741.0
25 TraesCS6A01G083200 chr6D 79.084 1114 127 61 918 1956 41520111 41521193 0.000000e+00 669.0
26 TraesCS6A01G083200 chr6D 82.875 654 66 24 5165 5801 17040348 17040972 4.870000e-151 545.0
27 TraesCS6A01G083200 chr6D 90.458 262 13 3 2218 2479 41521498 41521747 1.150000e-87 335.0
28 TraesCS6A01G083200 chr6D 85.627 327 21 12 434 740 41518727 41519047 3.220000e-83 320.0
29 TraesCS6A01G083200 chr6D 91.304 184 10 2 2096 2273 41521316 41521499 5.540000e-61 246.0
30 TraesCS6A01G083200 chr6D 83.051 295 27 11 2517 2800 41521828 41522110 5.540000e-61 246.0
31 TraesCS6A01G083200 chr6D 88.525 183 14 5 1 179 41518550 41518729 1.560000e-51 215.0
32 TraesCS6A01G083200 chr6D 100.000 55 0 0 2043 2097 358592931 358592985 1.270000e-17 102.0
33 TraesCS6A01G083200 chr6D 100.000 54 0 0 2043 2096 230704159 230704106 4.560000e-17 100.0
34 TraesCS6A01G083200 chr6D 98.182 55 1 0 2043 2097 49271984 49272038 5.900000e-16 97.1
35 TraesCS6A01G083200 chr6D 98.182 55 1 0 2042 2096 347392698 347392644 5.900000e-16 97.1
36 TraesCS6A01G083200 chr6D 98.182 55 1 0 2043 2097 382866342 382866288 5.900000e-16 97.1
37 TraesCS6A01G083200 chr6D 92.188 64 5 0 2034 2097 429841922 429841985 2.740000e-14 91.6
38 TraesCS6A01G083200 chr4B 85.430 803 81 18 6047 6822 14027689 14028482 0.000000e+00 802.0
39 TraesCS6A01G083200 chr4B 84.932 803 82 23 6047 6820 551786343 551785551 0.000000e+00 776.0
40 TraesCS6A01G083200 chr4B 83.353 853 91 21 4149 4970 342968073 342967241 0.000000e+00 741.0
41 TraesCS6A01G083200 chr4B 83.765 733 78 12 6047 6749 656165574 656166295 0.000000e+00 656.0
42 TraesCS6A01G083200 chr4B 84.282 369 43 9 4604 4970 186426890 186427245 5.310000e-91 346.0
43 TraesCS6A01G083200 chr4B 83.129 326 37 13 4155 4476 186426522 186426833 1.520000e-71 281.0
44 TraesCS6A01G083200 chr4B 89.756 205 16 4 6945 7145 551785515 551785312 2.560000e-64 257.0
45 TraesCS6A01G083200 chr4D 85.323 804 80 18 6047 6822 102105284 102106077 0.000000e+00 797.0
46 TraesCS6A01G083200 chr4D 82.214 804 84 28 6051 6822 39368165 39368941 7.820000e-179 638.0
47 TraesCS6A01G083200 chr4D 81.491 805 87 26 6051 6825 380247796 380247024 7.930000e-169 604.0
48 TraesCS6A01G083200 chr4D 90.148 203 17 2 6945 7145 414226399 414226198 1.980000e-65 261.0
49 TraesCS6A01G083200 chr4D 89.320 206 16 5 6945 7145 102106111 102106315 3.310000e-63 254.0
50 TraesCS6A01G083200 chr4D 100.000 55 0 0 2043 2097 472938405 472938459 1.270000e-17 102.0
51 TraesCS6A01G083200 chr4D 100.000 54 0 0 2043 2096 155483692 155483639 4.560000e-17 100.0
52 TraesCS6A01G083200 chr4D 98.182 55 1 0 2043 2097 242203107 242203161 5.900000e-16 97.1
53 TraesCS6A01G083200 chr4D 98.182 55 1 0 2043 2097 486889828 486889774 5.900000e-16 97.1
54 TraesCS6A01G083200 chr4D 98.148 54 1 0 2043 2096 125467024 125466971 2.120000e-15 95.3
55 TraesCS6A01G083200 chr4D 98.148 54 1 0 2043 2096 144974225 144974172 2.120000e-15 95.3
56 TraesCS6A01G083200 chr4D 98.148 54 1 0 2043 2096 146320535 146320588 2.120000e-15 95.3
57 TraesCS6A01G083200 chr4D 98.148 54 1 0 2043 2096 300720530 300720477 2.120000e-15 95.3
58 TraesCS6A01G083200 chr4D 98.148 54 1 0 2043 2096 308231775 308231828 2.120000e-15 95.3
59 TraesCS6A01G083200 chr4D 96.491 57 2 0 2043 2099 315601643 315601699 2.120000e-15 95.3
60 TraesCS6A01G083200 chr4D 94.915 59 3 0 2039 2097 501907242 501907300 7.630000e-15 93.5
61 TraesCS6A01G083200 chr2D 84.653 808 85 10 6047 6825 469182347 469181550 0.000000e+00 769.0
62 TraesCS6A01G083200 chr2D 82.298 853 100 26 4149 4970 229313200 229314032 0.000000e+00 691.0
63 TraesCS6A01G083200 chr2D 85.957 648 52 15 4355 4970 65813248 65813888 0.000000e+00 656.0
64 TraesCS6A01G083200 chr2D 89.344 122 8 5 5390 5510 65814708 65814825 1.610000e-31 148.0
65 TraesCS6A01G083200 chr2D 100.000 55 0 0 2043 2097 478730683 478730629 1.270000e-17 102.0
66 TraesCS6A01G083200 chr7B 84.644 801 84 23 6051 6822 133872116 133872906 0.000000e+00 761.0
67 TraesCS6A01G083200 chr7B 81.583 657 73 23 5165 5804 722096935 722096310 3.850000e-137 499.0
68 TraesCS6A01G083200 chr7B 96.774 62 2 0 2036 2097 453588346 453588285 3.530000e-18 104.0
69 TraesCS6A01G083200 chr3B 83.353 841 83 32 4149 4957 784573897 784573082 0.000000e+00 725.0
70 TraesCS6A01G083200 chr3B 82.515 652 67 21 4351 4970 569599322 569599958 4.910000e-146 529.0
71 TraesCS6A01G083200 chr3B 82.040 657 72 24 5165 5804 379656386 379655759 1.060000e-142 518.0
72 TraesCS6A01G083200 chr3B 92.537 67 3 2 2032 2097 622386549 622386484 2.120000e-15 95.3
73 TraesCS6A01G083200 chr3D 83.375 806 86 23 6051 6825 55165459 55164671 0.000000e+00 702.0
74 TraesCS6A01G083200 chr3D 83.594 384 42 14 4149 4526 34546411 34546779 2.470000e-89 340.0
75 TraesCS6A01G083200 chr3D 80.940 383 35 22 4149 4529 8354062 8353716 1.180000e-67 268.0
76 TraesCS6A01G083200 chr3D 89.655 203 18 2 6945 7145 575946142 575946343 9.200000e-64 255.0
77 TraesCS6A01G083200 chr3D 100.000 55 0 0 2043 2097 600658141 600658195 1.270000e-17 102.0
78 TraesCS6A01G083200 chr1A 83.526 777 80 23 6080 6822 46223073 46223835 0.000000e+00 682.0
79 TraesCS6A01G083200 chr1A 84.000 325 36 11 4155 4476 577673992 577673681 1.510000e-76 298.0
80 TraesCS6A01G083200 chr1A 88.532 218 23 2 4754 4970 577673323 577673107 5.500000e-66 263.0
81 TraesCS6A01G083200 chr1A 88.235 68 5 3 5443 5510 232831652 232831716 2.140000e-10 78.7
82 TraesCS6A01G083200 chr3A 82.193 848 96 33 4149 4970 295948684 295947866 0.000000e+00 678.0
83 TraesCS6A01G083200 chr3A 82.638 599 58 24 5165 5749 128656562 128657128 8.330000e-134 488.0
84 TraesCS6A01G083200 chr1D 81.807 808 85 29 6051 6825 369902156 369901378 7.870000e-174 621.0
85 TraesCS6A01G083200 chr1D 84.084 333 36 13 4153 4482 2853812 2854130 9.000000e-79 305.0
86 TraesCS6A01G083200 chr1D 100.000 54 0 0 2043 2096 190588079 190588026 4.560000e-17 100.0
87 TraesCS6A01G083200 chr1D 100.000 54 0 0 2043 2096 320948794 320948741 4.560000e-17 100.0
88 TraesCS6A01G083200 chr5D 81.784 807 76 31 6051 6825 391996512 391995745 1.700000e-170 610.0
89 TraesCS6A01G083200 chr5D 81.304 813 87 36 6051 6822 445797182 445797970 3.690000e-167 599.0
90 TraesCS6A01G083200 chr5D 85.000 380 41 12 4149 4526 524292478 524292843 8.750000e-99 372.0
91 TraesCS6A01G083200 chr5D 82.902 386 43 14 4149 4529 289583093 289582726 6.910000e-85 326.0
92 TraesCS6A01G083200 chr5D 100.000 54 0 0 2043 2096 226743733 226743786 4.560000e-17 100.0
93 TraesCS6A01G083200 chr5D 91.667 72 4 2 2027 2097 462044272 462044342 1.640000e-16 99.0
94 TraesCS6A01G083200 chr5D 100.000 28 0 0 6021 6048 470045873 470045900 1.300000e-02 52.8
95 TraesCS6A01G083200 chr5B 81.445 803 74 40 6051 6822 202890902 202891660 7.980000e-164 588.0
96 TraesCS6A01G083200 chr5B 82.040 657 72 24 5165 5804 328276429 328275802 1.060000e-142 518.0
97 TraesCS6A01G083200 chr1B 83.589 652 60 20 4351 4970 632754175 632754811 1.040000e-157 568.0
98 TraesCS6A01G083200 chr1B 80.224 804 83 33 6051 6822 619122936 619123695 1.060000e-147 534.0
99 TraesCS6A01G083200 chr1B 91.304 115 9 1 4146 4260 632754006 632754119 9.600000e-34 156.0
100 TraesCS6A01G083200 chr1B 100.000 55 0 0 2043 2097 200471643 200471697 1.270000e-17 102.0
101 TraesCS6A01G083200 chr1B 90.278 72 4 3 2027 2097 96515964 96515895 2.740000e-14 91.6
102 TraesCS6A01G083200 chr1B 87.013 77 6 4 5434 5510 632755534 632755606 4.590000e-12 84.2
103 TraesCS6A01G083200 chr2A 81.325 664 68 30 5165 5804 276861486 276860855 8.330000e-134 488.0
104 TraesCS6A01G083200 chr2A 97.177 248 7 0 183 430 757312215 757311968 3.080000e-113 420.0
105 TraesCS6A01G083200 chr2A 95.181 249 12 0 183 431 757319880 757319632 1.870000e-105 394.0
106 TraesCS6A01G083200 chr2A 84.553 369 42 8 4604 4970 94387499 94387144 1.140000e-92 351.0
107 TraesCS6A01G083200 chr4A 80.635 661 72 28 5165 5801 566586943 566587571 1.820000e-125 460.0
108 TraesCS6A01G083200 chr4A 95.582 249 11 0 183 431 713725714 713725466 4.020000e-107 399.0
109 TraesCS6A01G083200 chr4A 94.561 239 12 1 194 432 693541412 693541649 1.130000e-97 368.0
110 TraesCS6A01G083200 chr4A 89.268 205 17 4 6945 7145 418072176 418072379 1.190000e-62 252.0
111 TraesCS6A01G083200 chr4A 92.667 150 10 1 202 350 693531812 693531961 1.560000e-51 215.0
112 TraesCS6A01G083200 chr4A 89.610 77 4 4 2022 2096 681935055 681935129 2.120000e-15 95.3
113 TraesCS6A01G083200 chr7D 84.821 336 35 11 4149 4482 292420868 292421189 2.490000e-84 324.0
114 TraesCS6A01G083200 chr2B 90.148 203 17 2 6945 7145 46494933 46495134 1.980000e-65 261.0
115 TraesCS6A01G083200 chr2B 98.182 55 1 0 2043 2097 523461468 523461414 5.900000e-16 97.1
116 TraesCS6A01G083200 chr7A 89.756 205 16 4 6945 7145 141652143 141652346 2.560000e-64 257.0
117 TraesCS6A01G083200 chr7A 89.756 205 16 4 6945 7145 141902883 141903086 2.560000e-64 257.0
118 TraesCS6A01G083200 chr7A 89.268 205 17 4 6945 7145 141057610 141057813 1.190000e-62 252.0
119 TraesCS6A01G083200 chrUn 100.000 54 0 0 2043 2096 55009742 55009795 4.560000e-17 100.0
120 TraesCS6A01G083200 chrUn 98.182 55 1 0 2043 2097 60593289 60593235 5.900000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G083200 chr6A 51946908 51954052 7144 False 13195.000000 13195 100.000000 1 7145 1 chr6A.!!$F3 7144
1 TraesCS6A01G083200 chr6A 4926806 4927632 826 True 767.000000 767 84.061000 4155 4968 1 chr6A.!!$R1 813
2 TraesCS6A01G083200 chr6A 214074194 214074751 557 False 477.000000 477 82.363000 5165 5740 1 chr6A.!!$F4 575
3 TraesCS6A01G083200 chr6A 463743173 463743896 723 False 321.500000 351 84.122500 4155 4970 2 chr6A.!!$F5 815
4 TraesCS6A01G083200 chr6B 96399574 96407041 7467 True 928.166667 3825 86.728000 1 5967 6 chr6B.!!$R3 5966
5 TraesCS6A01G083200 chr6B 649826475 649827272 797 False 767.000000 767 84.653000 6046 6822 1 chr6B.!!$F2 776
6 TraesCS6A01G083200 chr6B 575572922 575573753 831 True 691.000000 691 82.277000 4149 4970 1 chr6B.!!$R1 821
7 TraesCS6A01G083200 chr6B 302278660 302279383 723 False 319.000000 340 83.981000 4155 4970 2 chr6B.!!$F3 815
8 TraesCS6A01G083200 chr6D 41518550 41525447 6897 False 812.285714 3655 86.642857 1 6019 7 chr6D.!!$F5 6018
9 TraesCS6A01G083200 chr6D 450906788 450907584 796 True 802.000000 802 85.396000 6047 6825 1 chr6D.!!$R6 778
10 TraesCS6A01G083200 chr6D 305746183 305746980 797 True 785.000000 785 85.025000 6047 6825 1 chr6D.!!$R3 778
11 TraesCS6A01G083200 chr6D 225661946 225662778 832 True 741.000000 741 83.353000 4149 4970 1 chr6D.!!$R1 821
12 TraesCS6A01G083200 chr6D 17040348 17040972 624 False 545.000000 545 82.875000 5165 5801 1 chr6D.!!$F1 636
13 TraesCS6A01G083200 chr4B 14027689 14028482 793 False 802.000000 802 85.430000 6047 6822 1 chr4B.!!$F1 775
14 TraesCS6A01G083200 chr4B 342967241 342968073 832 True 741.000000 741 83.353000 4149 4970 1 chr4B.!!$R1 821
15 TraesCS6A01G083200 chr4B 656165574 656166295 721 False 656.000000 656 83.765000 6047 6749 1 chr4B.!!$F2 702
16 TraesCS6A01G083200 chr4B 551785312 551786343 1031 True 516.500000 776 87.344000 6047 7145 2 chr4B.!!$R2 1098
17 TraesCS6A01G083200 chr4B 186426522 186427245 723 False 313.500000 346 83.705500 4155 4970 2 chr4B.!!$F3 815
18 TraesCS6A01G083200 chr4D 39368165 39368941 776 False 638.000000 638 82.214000 6051 6822 1 chr4D.!!$F1 771
19 TraesCS6A01G083200 chr4D 380247024 380247796 772 True 604.000000 604 81.491000 6051 6825 1 chr4D.!!$R5 774
20 TraesCS6A01G083200 chr4D 102105284 102106315 1031 False 525.500000 797 87.321500 6047 7145 2 chr4D.!!$F8 1098
21 TraesCS6A01G083200 chr2D 469181550 469182347 797 True 769.000000 769 84.653000 6047 6825 1 chr2D.!!$R1 778
22 TraesCS6A01G083200 chr2D 229313200 229314032 832 False 691.000000 691 82.298000 4149 4970 1 chr2D.!!$F1 821
23 TraesCS6A01G083200 chr2D 65813248 65814825 1577 False 402.000000 656 87.650500 4355 5510 2 chr2D.!!$F2 1155
24 TraesCS6A01G083200 chr7B 133872116 133872906 790 False 761.000000 761 84.644000 6051 6822 1 chr7B.!!$F1 771
25 TraesCS6A01G083200 chr7B 722096310 722096935 625 True 499.000000 499 81.583000 5165 5804 1 chr7B.!!$R2 639
26 TraesCS6A01G083200 chr3B 784573082 784573897 815 True 725.000000 725 83.353000 4149 4957 1 chr3B.!!$R3 808
27 TraesCS6A01G083200 chr3B 569599322 569599958 636 False 529.000000 529 82.515000 4351 4970 1 chr3B.!!$F1 619
28 TraesCS6A01G083200 chr3B 379655759 379656386 627 True 518.000000 518 82.040000 5165 5804 1 chr3B.!!$R1 639
29 TraesCS6A01G083200 chr3D 55164671 55165459 788 True 702.000000 702 83.375000 6051 6825 1 chr3D.!!$R2 774
30 TraesCS6A01G083200 chr1A 46223073 46223835 762 False 682.000000 682 83.526000 6080 6822 1 chr1A.!!$F1 742
31 TraesCS6A01G083200 chr1A 577673107 577673992 885 True 280.500000 298 86.266000 4155 4970 2 chr1A.!!$R1 815
32 TraesCS6A01G083200 chr3A 295947866 295948684 818 True 678.000000 678 82.193000 4149 4970 1 chr3A.!!$R1 821
33 TraesCS6A01G083200 chr3A 128656562 128657128 566 False 488.000000 488 82.638000 5165 5749 1 chr3A.!!$F1 584
34 TraesCS6A01G083200 chr1D 369901378 369902156 778 True 621.000000 621 81.807000 6051 6825 1 chr1D.!!$R3 774
35 TraesCS6A01G083200 chr5D 391995745 391996512 767 True 610.000000 610 81.784000 6051 6825 1 chr5D.!!$R2 774
36 TraesCS6A01G083200 chr5D 445797182 445797970 788 False 599.000000 599 81.304000 6051 6822 1 chr5D.!!$F2 771
37 TraesCS6A01G083200 chr5B 202890902 202891660 758 False 588.000000 588 81.445000 6051 6822 1 chr5B.!!$F1 771
38 TraesCS6A01G083200 chr5B 328275802 328276429 627 True 518.000000 518 82.040000 5165 5804 1 chr5B.!!$R1 639
39 TraesCS6A01G083200 chr1B 619122936 619123695 759 False 534.000000 534 80.224000 6051 6822 1 chr1B.!!$F2 771
40 TraesCS6A01G083200 chr1B 632754006 632755606 1600 False 269.400000 568 87.302000 4146 5510 3 chr1B.!!$F3 1364
41 TraesCS6A01G083200 chr2A 276860855 276861486 631 True 488.000000 488 81.325000 5165 5804 1 chr2A.!!$R2 639
42 TraesCS6A01G083200 chr4A 566586943 566587571 628 False 460.000000 460 80.635000 5165 5801 1 chr4A.!!$F2 636

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
361 377 0.104487 TTGTAACACGCCGGTTCAGA 59.896 50.0 1.90 0.0 32.29 3.27 F
1610 3395 0.096976 CGATTTCGCGCTGGATTGTT 59.903 50.0 5.56 0.0 0.00 2.83 F
2491 4449 0.040514 CTGAATTGGTTTCGCGCACA 60.041 50.0 8.75 0.0 37.13 4.57 F
3331 5424 0.109689 CGTCGTCGAGCCTTCTTCTT 60.110 55.0 0.00 0.0 39.71 2.52 F
3377 5470 0.466922 AGCTATCCATGGCTGGTTGC 60.467 55.0 6.96 5.8 43.33 4.17 F
3776 5902 0.514255 TCACGGTCACGAGTTACGAG 59.486 55.0 0.00 0.0 45.77 4.18 F
3777 5903 0.514255 CACGGTCACGAGTTACGAGA 59.486 55.0 0.00 0.0 45.77 4.04 F
5573 8520 0.535102 AAGCTGGCGCAGTAACTTGT 60.535 50.0 10.83 0.0 39.10 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2299 4226 0.174162 CAGCCAAAACTATGCCCAGC 59.826 55.0 0.00 0.00 0.00 4.85 R
2959 4983 0.324738 AATCAGAGAGAGCGTGGGGA 60.325 55.0 0.00 0.00 0.00 4.81 R
3952 6078 0.321919 GCACAGAGAACATCCAGGCA 60.322 55.0 0.00 0.00 0.00 4.75 R
4837 7267 0.530744 TGTCACGAGGATGCTGGTAC 59.469 55.0 0.68 2.46 0.00 3.34 R
5037 7685 0.677288 CGGGTTCCTCACAGTGTGTA 59.323 55.0 22.29 8.90 34.79 2.90 R
5401 8335 0.455633 CGTTCTTGAGCTGCAATGGC 60.456 55.0 1.02 0.00 35.59 4.40 R
5752 8703 0.591170 AAACCAACGAGCCACAATCG 59.409 50.0 0.00 0.00 45.54 3.34 R
6941 9971 0.031178 GACAACAAGGGCAAGCACTG 59.969 55.0 0.00 0.00 0.00 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 58 1.270305 TGGAAGAGACAGAAAGCACCG 60.270 52.381 0.00 0.00 0.00 4.94
101 102 0.906282 CCCCCAGCCAAGCTTTCATT 60.906 55.000 0.00 0.00 36.40 2.57
137 153 3.966543 CCCCAACGACCAGCCCTT 61.967 66.667 0.00 0.00 0.00 3.95
138 154 2.359975 CCCAACGACCAGCCCTTC 60.360 66.667 0.00 0.00 0.00 3.46
141 157 4.016706 AACGACCAGCCCTTCCCG 62.017 66.667 0.00 0.00 0.00 5.14
171 187 1.373748 GAAGCTTCCCGCACGTACA 60.374 57.895 15.97 0.00 42.61 2.90
179 195 1.518572 CCGCACGTACATGAGGACC 60.519 63.158 5.73 0.00 41.76 4.46
180 196 1.872234 CGCACGTACATGAGGACCG 60.872 63.158 0.00 0.00 0.00 4.79
181 197 1.518572 GCACGTACATGAGGACCGG 60.519 63.158 0.00 0.00 0.00 5.28
184 200 1.065102 CACGTACATGAGGACCGGTAG 59.935 57.143 7.34 0.00 0.00 3.18
185 201 0.666913 CGTACATGAGGACCGGTAGG 59.333 60.000 7.34 0.00 45.13 3.18
186 202 1.748244 CGTACATGAGGACCGGTAGGA 60.748 57.143 7.34 0.00 41.02 2.94
187 203 2.381911 GTACATGAGGACCGGTAGGAA 58.618 52.381 7.34 0.00 41.02 3.36
188 204 1.946984 ACATGAGGACCGGTAGGAAA 58.053 50.000 7.34 0.00 41.02 3.13
189 205 2.478292 ACATGAGGACCGGTAGGAAAT 58.522 47.619 7.34 0.00 41.02 2.17
190 206 3.649843 ACATGAGGACCGGTAGGAAATA 58.350 45.455 7.34 0.00 41.02 1.40
191 207 4.232091 ACATGAGGACCGGTAGGAAATAT 58.768 43.478 7.34 0.00 41.02 1.28
192 208 4.658901 ACATGAGGACCGGTAGGAAATATT 59.341 41.667 7.34 0.00 41.02 1.28
193 209 5.842328 ACATGAGGACCGGTAGGAAATATTA 59.158 40.000 7.34 0.00 41.02 0.98
194 210 6.500751 ACATGAGGACCGGTAGGAAATATTAT 59.499 38.462 7.34 0.00 41.02 1.28
195 211 7.017254 ACATGAGGACCGGTAGGAAATATTATT 59.983 37.037 7.34 0.00 41.02 1.40
196 212 8.537016 CATGAGGACCGGTAGGAAATATTATTA 58.463 37.037 7.34 0.00 41.02 0.98
197 213 8.130671 TGAGGACCGGTAGGAAATATTATTAG 57.869 38.462 7.34 0.00 41.02 1.73
198 214 7.731688 TGAGGACCGGTAGGAAATATTATTAGT 59.268 37.037 7.34 0.00 41.02 2.24
199 215 8.502047 AGGACCGGTAGGAAATATTATTAGTT 57.498 34.615 7.34 0.00 41.02 2.24
200 216 9.605951 AGGACCGGTAGGAAATATTATTAGTTA 57.394 33.333 7.34 0.00 41.02 2.24
217 233 9.865321 TTATTAGTTAAGATGTTAGCGTCAGTT 57.135 29.630 1.39 0.00 33.18 3.16
218 234 8.773404 ATTAGTTAAGATGTTAGCGTCAGTTT 57.227 30.769 1.39 0.00 33.18 2.66
219 235 8.597662 TTAGTTAAGATGTTAGCGTCAGTTTT 57.402 30.769 1.39 0.00 33.18 2.43
220 236 9.695526 TTAGTTAAGATGTTAGCGTCAGTTTTA 57.304 29.630 1.39 0.00 33.18 1.52
221 237 8.240883 AGTTAAGATGTTAGCGTCAGTTTTAG 57.759 34.615 1.39 0.00 33.18 1.85
222 238 8.086522 AGTTAAGATGTTAGCGTCAGTTTTAGA 58.913 33.333 1.39 0.00 33.18 2.10
223 239 6.707599 AAGATGTTAGCGTCAGTTTTAGAC 57.292 37.500 1.39 0.00 33.18 2.59
224 240 6.026947 AGATGTTAGCGTCAGTTTTAGACT 57.973 37.500 1.39 0.00 39.89 3.24
225 241 7.154435 AGATGTTAGCGTCAGTTTTAGACTA 57.846 36.000 1.39 0.00 36.65 2.59
226 242 7.600065 AGATGTTAGCGTCAGTTTTAGACTAA 58.400 34.615 1.39 0.00 36.65 2.24
227 243 6.998258 TGTTAGCGTCAGTTTTAGACTAAC 57.002 37.500 0.00 0.00 36.65 2.34
228 244 6.506147 TGTTAGCGTCAGTTTTAGACTAACA 58.494 36.000 8.23 8.23 35.80 2.41
229 245 7.149973 TGTTAGCGTCAGTTTTAGACTAACAT 58.850 34.615 8.23 0.00 34.49 2.71
230 246 8.298854 TGTTAGCGTCAGTTTTAGACTAACATA 58.701 33.333 8.23 0.00 34.49 2.29
231 247 8.796278 GTTAGCGTCAGTTTTAGACTAACATAG 58.204 37.037 0.00 0.00 36.65 2.23
232 248 5.805994 AGCGTCAGTTTTAGACTAACATAGC 59.194 40.000 0.00 0.00 36.65 2.97
233 249 5.575606 GCGTCAGTTTTAGACTAACATAGCA 59.424 40.000 0.00 0.00 36.65 3.49
234 250 6.237595 GCGTCAGTTTTAGACTAACATAGCAG 60.238 42.308 0.00 0.00 36.65 4.24
235 251 6.807230 CGTCAGTTTTAGACTAACATAGCAGT 59.193 38.462 0.00 0.00 36.65 4.40
236 252 7.328737 CGTCAGTTTTAGACTAACATAGCAGTT 59.671 37.037 0.00 0.00 36.65 3.16
237 253 9.635520 GTCAGTTTTAGACTAACATAGCAGTTA 57.364 33.333 0.00 0.00 36.65 2.24
246 262 6.426646 CTAACATAGCAGTTAGGATTCCCT 57.573 41.667 13.02 0.00 44.50 4.20
247 263 7.540474 CTAACATAGCAGTTAGGATTCCCTA 57.460 40.000 13.02 0.00 44.50 3.53
248 264 8.140112 CTAACATAGCAGTTAGGATTCCCTAT 57.860 38.462 13.02 0.00 44.50 2.57
249 265 9.256228 CTAACATAGCAGTTAGGATTCCCTATA 57.744 37.037 13.02 0.00 44.50 1.31
250 266 7.726033 ACATAGCAGTTAGGATTCCCTATAG 57.274 40.000 0.00 0.00 44.14 1.31
251 267 6.670027 ACATAGCAGTTAGGATTCCCTATAGG 59.330 42.308 12.27 12.27 44.14 2.57
252 268 3.841255 AGCAGTTAGGATTCCCTATAGGC 59.159 47.826 13.85 0.00 44.14 3.93
253 269 3.841255 GCAGTTAGGATTCCCTATAGGCT 59.159 47.826 13.85 7.15 44.14 4.58
254 270 5.024118 GCAGTTAGGATTCCCTATAGGCTA 58.976 45.833 13.85 6.15 44.14 3.93
255 271 5.484290 GCAGTTAGGATTCCCTATAGGCTAA 59.516 44.000 13.85 11.66 44.14 3.09
256 272 6.574662 GCAGTTAGGATTCCCTATAGGCTAAC 60.575 46.154 24.63 24.63 44.14 2.34
257 273 6.726764 CAGTTAGGATTCCCTATAGGCTAACT 59.273 42.308 26.90 26.90 44.14 2.24
258 274 7.894364 CAGTTAGGATTCCCTATAGGCTAACTA 59.106 40.741 29.34 18.62 44.14 2.24
259 275 7.894897 AGTTAGGATTCCCTATAGGCTAACTAC 59.105 40.741 29.07 15.43 44.14 2.73
260 276 5.591806 AGGATTCCCTATAGGCTAACTACC 58.408 45.833 13.85 12.66 42.15 3.18
261 277 5.319162 AGGATTCCCTATAGGCTAACTACCT 59.681 44.000 13.85 14.28 42.15 3.08
262 278 6.511807 AGGATTCCCTATAGGCTAACTACCTA 59.488 42.308 13.85 0.00 42.15 3.08
263 279 6.606796 GGATTCCCTATAGGCTAACTACCTAC 59.393 46.154 13.85 0.00 42.50 3.18
264 280 6.535161 TTCCCTATAGGCTAACTACCTACA 57.465 41.667 13.85 0.00 42.50 2.74
265 281 6.137104 TCCCTATAGGCTAACTACCTACAG 57.863 45.833 13.85 0.00 42.50 2.74
266 282 5.614402 TCCCTATAGGCTAACTACCTACAGT 59.386 44.000 13.85 0.00 42.50 3.55
267 283 6.103797 TCCCTATAGGCTAACTACCTACAGTT 59.896 42.308 13.85 0.00 42.50 3.16
268 284 7.295672 TCCCTATAGGCTAACTACCTACAGTTA 59.704 40.741 13.85 0.00 42.50 2.24
275 291 4.861102 AACTACCTACAGTTAGCGTTGT 57.139 40.909 0.00 0.00 36.99 3.32
276 292 4.431661 ACTACCTACAGTTAGCGTTGTC 57.568 45.455 0.00 0.00 0.00 3.18
277 293 2.738013 ACCTACAGTTAGCGTTGTCC 57.262 50.000 0.00 0.00 0.00 4.02
278 294 1.965643 ACCTACAGTTAGCGTTGTCCA 59.034 47.619 0.00 0.00 0.00 4.02
279 295 2.565834 ACCTACAGTTAGCGTTGTCCAT 59.434 45.455 0.00 0.00 0.00 3.41
280 296 3.765511 ACCTACAGTTAGCGTTGTCCATA 59.234 43.478 0.00 0.00 0.00 2.74
281 297 4.110482 CCTACAGTTAGCGTTGTCCATAC 58.890 47.826 0.00 0.00 0.00 2.39
282 298 2.602878 ACAGTTAGCGTTGTCCATACG 58.397 47.619 0.00 0.00 41.71 3.06
288 304 2.822306 CGTTGTCCATACGCTGTGT 58.178 52.632 0.00 0.00 31.73 3.72
289 305 1.985334 CGTTGTCCATACGCTGTGTA 58.015 50.000 3.23 3.23 37.49 2.90
290 306 2.536365 CGTTGTCCATACGCTGTGTAT 58.464 47.619 8.01 8.01 44.73 2.29
299 315 3.813596 GCTGTGTATGGCGAAGGG 58.186 61.111 0.00 0.00 0.00 3.95
300 316 1.220749 GCTGTGTATGGCGAAGGGA 59.779 57.895 0.00 0.00 0.00 4.20
301 317 1.090052 GCTGTGTATGGCGAAGGGAC 61.090 60.000 0.00 0.00 0.00 4.46
302 318 0.249120 CTGTGTATGGCGAAGGGACA 59.751 55.000 0.00 0.00 38.71 4.02
304 320 1.134521 TGTGTATGGCGAAGGGACATC 60.135 52.381 0.00 0.00 42.10 3.06
305 321 1.134521 GTGTATGGCGAAGGGACATCA 60.135 52.381 0.00 0.00 42.10 3.07
306 322 1.768275 TGTATGGCGAAGGGACATCAT 59.232 47.619 0.00 0.00 42.10 2.45
307 323 2.146342 GTATGGCGAAGGGACATCATG 58.854 52.381 0.00 0.00 42.10 3.07
308 324 0.820891 ATGGCGAAGGGACATCATGC 60.821 55.000 0.00 0.00 42.10 4.06
309 325 2.189499 GGCGAAGGGACATCATGCC 61.189 63.158 0.00 0.00 39.76 4.40
318 334 4.110036 GGGACATCATGCCTGTTTAAAC 57.890 45.455 11.54 11.54 35.42 2.01
319 335 3.509575 GGGACATCATGCCTGTTTAAACA 59.490 43.478 19.53 19.53 35.42 2.83
333 349 5.911752 TGTTTAAACAGGCACAATCATTGT 58.088 33.333 17.01 0.00 38.21 2.71
334 350 7.043961 TGTTTAAACAGGCACAATCATTGTA 57.956 32.000 17.01 0.00 36.71 2.41
335 351 7.492524 TGTTTAAACAGGCACAATCATTGTAA 58.507 30.769 17.01 0.00 36.71 2.41
336 352 7.436673 TGTTTAAACAGGCACAATCATTGTAAC 59.563 33.333 17.01 1.66 36.71 2.50
337 353 4.519540 AACAGGCACAATCATTGTAACC 57.480 40.909 1.72 8.12 43.23 2.85
338 354 2.487762 ACAGGCACAATCATTGTAACCG 59.512 45.455 1.72 7.23 43.23 4.44
339 355 2.746904 CAGGCACAATCATTGTAACCGA 59.253 45.455 1.72 0.00 43.23 4.69
340 356 2.747446 AGGCACAATCATTGTAACCGAC 59.253 45.455 1.72 0.00 43.23 4.79
341 357 2.475519 GGCACAATCATTGTAACCGACG 60.476 50.000 1.72 0.00 43.23 5.12
342 358 2.158841 GCACAATCATTGTAACCGACGT 59.841 45.455 1.72 0.00 43.23 4.34
343 359 3.364565 GCACAATCATTGTAACCGACGTT 60.365 43.478 1.72 0.00 43.23 3.99
344 360 4.148166 CACAATCATTGTAACCGACGTTG 58.852 43.478 1.72 0.00 43.23 4.10
345 361 3.810941 ACAATCATTGTAACCGACGTTGT 59.189 39.130 0.00 0.00 43.27 3.32
346 362 4.989797 ACAATCATTGTAACCGACGTTGTA 59.010 37.500 0.00 0.00 43.27 2.41
347 363 5.466058 ACAATCATTGTAACCGACGTTGTAA 59.534 36.000 0.00 0.00 43.27 2.41
348 364 4.970472 TCATTGTAACCGACGTTGTAAC 57.030 40.909 1.30 0.00 33.17 2.50
349 365 4.366586 TCATTGTAACCGACGTTGTAACA 58.633 39.130 1.30 0.27 33.17 2.41
350 366 4.208873 TCATTGTAACCGACGTTGTAACAC 59.791 41.667 1.30 0.00 33.17 3.32
351 367 2.115595 TGTAACCGACGTTGTAACACG 58.884 47.619 1.30 0.00 46.04 4.49
352 368 1.127701 TAACCGACGTTGTAACACGC 58.872 50.000 1.30 0.00 44.37 5.34
353 369 1.489881 AACCGACGTTGTAACACGCC 61.490 55.000 1.30 0.00 44.37 5.68
354 370 2.462468 CGACGTTGTAACACGCCG 59.538 61.111 0.00 0.00 44.37 6.46
355 371 2.848310 GACGTTGTAACACGCCGG 59.152 61.111 0.00 0.00 44.37 6.13
356 372 1.950630 GACGTTGTAACACGCCGGT 60.951 57.895 1.90 0.00 44.37 5.28
357 373 1.489881 GACGTTGTAACACGCCGGTT 61.490 55.000 1.90 0.00 44.37 4.44
358 374 1.202320 CGTTGTAACACGCCGGTTC 59.798 57.895 1.90 0.00 32.43 3.62
359 375 1.489070 CGTTGTAACACGCCGGTTCA 61.489 55.000 1.90 0.00 32.43 3.18
360 376 0.233848 GTTGTAACACGCCGGTTCAG 59.766 55.000 1.90 0.00 32.29 3.02
361 377 0.104487 TTGTAACACGCCGGTTCAGA 59.896 50.000 1.90 0.00 32.29 3.27
362 378 0.319083 TGTAACACGCCGGTTCAGAT 59.681 50.000 1.90 0.00 32.29 2.90
363 379 0.719465 GTAACACGCCGGTTCAGATG 59.281 55.000 1.90 0.00 32.29 2.90
364 380 0.390603 TAACACGCCGGTTCAGATGG 60.391 55.000 1.90 0.00 32.29 3.51
365 381 2.047274 CACGCCGGTTCAGATGGT 60.047 61.111 1.90 0.00 0.00 3.55
366 382 1.216977 CACGCCGGTTCAGATGGTA 59.783 57.895 1.90 0.00 0.00 3.25
367 383 0.179084 CACGCCGGTTCAGATGGTAT 60.179 55.000 1.90 0.00 0.00 2.73
368 384 1.067974 CACGCCGGTTCAGATGGTATA 59.932 52.381 1.90 0.00 0.00 1.47
369 385 1.968493 ACGCCGGTTCAGATGGTATAT 59.032 47.619 1.90 0.00 0.00 0.86
370 386 3.057104 CACGCCGGTTCAGATGGTATATA 60.057 47.826 1.90 0.00 0.00 0.86
371 387 3.575256 ACGCCGGTTCAGATGGTATATAA 59.425 43.478 1.90 0.00 0.00 0.98
372 388 4.174009 CGCCGGTTCAGATGGTATATAAG 58.826 47.826 1.90 0.00 0.00 1.73
373 389 4.504858 GCCGGTTCAGATGGTATATAAGG 58.495 47.826 1.90 0.00 0.00 2.69
374 390 4.504858 CCGGTTCAGATGGTATATAAGGC 58.495 47.826 0.00 0.00 0.00 4.35
375 391 4.223032 CCGGTTCAGATGGTATATAAGGCT 59.777 45.833 0.00 0.00 0.00 4.58
376 392 5.171476 CGGTTCAGATGGTATATAAGGCTG 58.829 45.833 0.00 0.00 0.00 4.85
377 393 5.047306 CGGTTCAGATGGTATATAAGGCTGA 60.047 44.000 0.00 0.00 0.00 4.26
378 394 6.518369 CGGTTCAGATGGTATATAAGGCTGAA 60.518 42.308 0.00 0.00 38.23 3.02
380 396 6.994421 TCAGATGGTATATAAGGCTGAACA 57.006 37.500 0.00 0.00 0.00 3.18
381 397 6.997655 TCAGATGGTATATAAGGCTGAACAG 58.002 40.000 0.00 0.00 0.00 3.16
382 398 6.554982 TCAGATGGTATATAAGGCTGAACAGT 59.445 38.462 3.77 0.00 0.00 3.55
383 399 7.728532 TCAGATGGTATATAAGGCTGAACAGTA 59.271 37.037 3.77 0.00 0.00 2.74
384 400 8.367911 CAGATGGTATATAAGGCTGAACAGTAA 58.632 37.037 3.77 0.00 0.00 2.24
385 401 8.368668 AGATGGTATATAAGGCTGAACAGTAAC 58.631 37.037 3.77 0.00 0.00 2.50
386 402 7.426606 TGGTATATAAGGCTGAACAGTAACA 57.573 36.000 3.77 0.00 0.00 2.41
387 403 8.029782 TGGTATATAAGGCTGAACAGTAACAT 57.970 34.615 3.77 0.00 0.00 2.71
388 404 8.148351 TGGTATATAAGGCTGAACAGTAACATC 58.852 37.037 3.77 0.00 0.00 3.06
389 405 8.148351 GGTATATAAGGCTGAACAGTAACATCA 58.852 37.037 3.77 0.00 0.00 3.07
390 406 9.542462 GTATATAAGGCTGAACAGTAACATCAA 57.458 33.333 3.77 0.00 0.00 2.57
394 410 7.759489 AAGGCTGAACAGTAACATCAATAAA 57.241 32.000 3.77 0.00 0.00 1.40
395 411 7.759489 AGGCTGAACAGTAACATCAATAAAA 57.241 32.000 3.77 0.00 0.00 1.52
396 412 7.593825 AGGCTGAACAGTAACATCAATAAAAC 58.406 34.615 3.77 0.00 0.00 2.43
397 413 7.448469 AGGCTGAACAGTAACATCAATAAAACT 59.552 33.333 3.77 0.00 0.00 2.66
398 414 8.726988 GGCTGAACAGTAACATCAATAAAACTA 58.273 33.333 3.77 0.00 0.00 2.24
399 415 9.543018 GCTGAACAGTAACATCAATAAAACTAC 57.457 33.333 3.77 0.00 0.00 2.73
403 419 9.787435 AACAGTAACATCAATAAAACTACTCCA 57.213 29.630 0.00 0.00 0.00 3.86
404 420 9.959721 ACAGTAACATCAATAAAACTACTCCAT 57.040 29.630 0.00 0.00 0.00 3.41
409 425 9.520515 AACATCAATAAAACTACTCCATTCACT 57.479 29.630 0.00 0.00 0.00 3.41
410 426 9.520515 ACATCAATAAAACTACTCCATTCACTT 57.479 29.630 0.00 0.00 0.00 3.16
411 427 9.994432 CATCAATAAAACTACTCCATTCACTTC 57.006 33.333 0.00 0.00 0.00 3.01
412 428 9.739276 ATCAATAAAACTACTCCATTCACTTCA 57.261 29.630 0.00 0.00 0.00 3.02
413 429 9.567776 TCAATAAAACTACTCCATTCACTTCAA 57.432 29.630 0.00 0.00 0.00 2.69
416 432 9.965902 ATAAAACTACTCCATTCACTTCAATCT 57.034 29.630 0.00 0.00 0.00 2.40
417 433 7.913674 AAACTACTCCATTCACTTCAATCTC 57.086 36.000 0.00 0.00 0.00 2.75
418 434 6.865834 ACTACTCCATTCACTTCAATCTCT 57.134 37.500 0.00 0.00 0.00 3.10
419 435 7.251321 ACTACTCCATTCACTTCAATCTCTT 57.749 36.000 0.00 0.00 0.00 2.85
420 436 8.367660 ACTACTCCATTCACTTCAATCTCTTA 57.632 34.615 0.00 0.00 0.00 2.10
421 437 8.986991 ACTACTCCATTCACTTCAATCTCTTAT 58.013 33.333 0.00 0.00 0.00 1.73
422 438 9.829507 CTACTCCATTCACTTCAATCTCTTATT 57.170 33.333 0.00 0.00 0.00 1.40
424 440 9.171877 ACTCCATTCACTTCAATCTCTTATTTC 57.828 33.333 0.00 0.00 0.00 2.17
425 441 9.393512 CTCCATTCACTTCAATCTCTTATTTCT 57.606 33.333 0.00 0.00 0.00 2.52
426 442 9.745018 TCCATTCACTTCAATCTCTTATTTCTT 57.255 29.630 0.00 0.00 0.00 2.52
436 452 9.144747 TCAATCTCTTATTTCTTCTCAAAGACG 57.855 33.333 0.00 0.00 41.23 4.18
437 453 8.930760 CAATCTCTTATTTCTTCTCAAAGACGT 58.069 33.333 0.00 0.00 41.23 4.34
438 454 8.696410 ATCTCTTATTTCTTCTCAAAGACGTC 57.304 34.615 7.70 7.70 41.23 4.34
439 455 7.887381 TCTCTTATTTCTTCTCAAAGACGTCT 58.113 34.615 13.58 13.58 41.23 4.18
440 456 8.024285 TCTCTTATTTCTTCTCAAAGACGTCTC 58.976 37.037 20.33 0.00 41.23 3.36
543 559 0.252330 TCGGGATAAGGTGGTGGTGA 60.252 55.000 0.00 0.00 0.00 4.02
651 715 4.759205 GCCCTGGGTCGGCCATTT 62.759 66.667 15.56 0.00 40.78 2.32
653 717 2.440247 CCTGGGTCGGCCATTTCC 60.440 66.667 9.07 0.00 36.17 3.13
654 718 2.677228 CTGGGTCGGCCATTTCCT 59.323 61.111 9.07 0.00 36.17 3.36
683 747 0.534877 AGATGTGTGCGTTGCCTTCA 60.535 50.000 0.00 0.00 0.00 3.02
718 782 0.182061 GCTTGGATGGAGGAGCATGA 59.818 55.000 0.00 0.00 35.29 3.07
734 798 8.688747 AGGAGCATGATTATTTTCTTTCTAGG 57.311 34.615 0.00 0.00 0.00 3.02
757 832 3.259123 ACCATGGCTTGGAGACATTTTTC 59.741 43.478 24.70 0.00 42.48 2.29
774 849 5.493133 TTTTTCACAGTGTGACATGTACC 57.507 39.130 25.43 0.00 42.60 3.34
831 906 5.576128 AGAAGGTAGAGCCAGGAGTATATC 58.424 45.833 0.00 0.00 40.61 1.63
832 907 5.075205 AGAAGGTAGAGCCAGGAGTATATCA 59.925 44.000 0.00 0.00 40.61 2.15
833 908 4.929479 AGGTAGAGCCAGGAGTATATCAG 58.071 47.826 0.00 0.00 40.61 2.90
834 909 4.355588 AGGTAGAGCCAGGAGTATATCAGT 59.644 45.833 0.00 0.00 40.61 3.41
835 910 5.552371 AGGTAGAGCCAGGAGTATATCAGTA 59.448 44.000 0.00 0.00 40.61 2.74
836 911 6.218730 AGGTAGAGCCAGGAGTATATCAGTAT 59.781 42.308 0.00 0.00 40.61 2.12
837 912 7.406445 AGGTAGAGCCAGGAGTATATCAGTATA 59.594 40.741 0.00 0.00 40.61 1.47
838 913 8.221944 GGTAGAGCCAGGAGTATATCAGTATAT 58.778 40.741 0.00 0.00 37.17 0.86
852 927 4.368315 TCAGTATATACGTGCTTGCCTTG 58.632 43.478 7.23 0.00 0.00 3.61
873 948 8.558700 GCCTTGTTGTATTTTGTCAAAATTCAT 58.441 29.630 24.67 7.78 41.16 2.57
976 2640 1.066257 GCAGGCACACCACAAGTTG 59.934 57.895 0.00 0.00 39.06 3.16
995 2659 1.582968 GAGACAAGTACCGCACCGA 59.417 57.895 0.00 0.00 0.00 4.69
997 2661 0.108804 AGACAAGTACCGCACCGATG 60.109 55.000 0.00 0.00 0.00 3.84
1082 2777 0.599558 GCGTCGCACCACCCTATATA 59.400 55.000 13.44 0.00 0.00 0.86
1083 2778 1.402456 GCGTCGCACCACCCTATATAG 60.402 57.143 13.44 2.46 0.00 1.31
1085 2780 1.067071 GTCGCACCACCCTATATAGCC 60.067 57.143 4.04 0.00 0.00 3.93
1086 2781 1.203137 TCGCACCACCCTATATAGCCT 60.203 52.381 4.04 0.00 0.00 4.58
1089 2784 1.825474 CACCACCCTATATAGCCTCCG 59.175 57.143 4.04 0.00 0.00 4.63
1091 2786 0.824759 CACCCTATATAGCCTCCGCC 59.175 60.000 4.04 0.00 34.57 6.13
1092 2787 0.711184 ACCCTATATAGCCTCCGCCT 59.289 55.000 4.04 0.00 34.57 5.52
1119 2819 2.041301 CCCCTCCCATCACCGGTA 60.041 66.667 6.87 0.00 0.00 4.02
1165 2869 2.095516 GCAGCGGAAGAAGAAGAAAAGG 60.096 50.000 0.00 0.00 0.00 3.11
1182 2886 9.770097 GAAGAAAAGGAAAAGAGAAAAATCCAT 57.230 29.630 0.00 0.00 32.47 3.41
1183 2887 9.770097 AAGAAAAGGAAAAGAGAAAAATCCATC 57.230 29.630 0.00 0.00 32.47 3.51
1186 2890 4.706962 AGGAAAAGAGAAAAATCCATCCGG 59.293 41.667 0.00 0.00 32.47 5.14
1208 2912 4.426112 GCGAGCAAAGGCCAAGGC 62.426 66.667 5.01 4.72 42.56 4.35
1209 2913 2.985282 CGAGCAAAGGCCAAGGCA 60.985 61.111 13.87 0.00 44.11 4.75
1211 2915 3.292500 GAGCAAAGGCCAAGGCAGC 62.293 63.158 13.87 10.67 44.11 5.25
1212 2916 3.308705 GCAAAGGCCAAGGCAGCT 61.309 61.111 13.87 0.00 44.11 4.24
1213 2917 2.875804 GCAAAGGCCAAGGCAGCTT 61.876 57.895 13.87 5.14 44.11 3.74
1214 2918 1.750297 CAAAGGCCAAGGCAGCTTT 59.250 52.632 13.87 10.94 44.11 3.51
1215 2919 0.601841 CAAAGGCCAAGGCAGCTTTG 60.602 55.000 20.59 20.59 40.80 2.77
1217 2921 4.729856 GGCCAAGGCAGCTTTGCG 62.730 66.667 11.77 6.56 44.11 4.85
1219 2923 2.049802 CCAAGGCAGCTTTGCGTG 60.050 61.111 11.77 0.00 35.24 5.34
1220 2924 2.732094 CAAGGCAGCTTTGCGTGC 60.732 61.111 4.03 0.00 39.08 5.34
1221 2925 4.332637 AAGGCAGCTTTGCGTGCG 62.333 61.111 0.00 0.00 40.82 5.34
1223 2927 4.748679 GGCAGCTTTGCGTGCGAG 62.749 66.667 0.00 0.00 40.82 5.03
1321 3031 2.728817 GGATGGGGCTACGACTCG 59.271 66.667 0.00 0.00 0.00 4.18
1401 3111 4.179599 CCTCCCCTCCTCCTCCCC 62.180 77.778 0.00 0.00 0.00 4.81
1414 3143 2.704198 TCCCCCTCTCCCTCCGAT 60.704 66.667 0.00 0.00 0.00 4.18
1418 3147 2.066393 CCCTCTCCCTCCGATTGCA 61.066 63.158 0.00 0.00 0.00 4.08
1420 3149 1.045350 CCTCTCCCTCCGATTGCAGA 61.045 60.000 0.00 0.00 0.00 4.26
1556 3321 1.956620 GCTGTTCGTTAGCGCTGGAC 61.957 60.000 22.90 17.42 38.14 4.02
1587 3352 3.131478 CCGATTCGGTGGGTTGGC 61.131 66.667 17.08 0.00 42.73 4.52
1610 3395 0.096976 CGATTTCGCGCTGGATTGTT 59.903 50.000 5.56 0.00 0.00 2.83
1620 3405 3.206150 CGCTGGATTGTTAGCATTAGGT 58.794 45.455 0.00 0.00 39.87 3.08
1621 3406 3.248602 CGCTGGATTGTTAGCATTAGGTC 59.751 47.826 0.00 0.00 39.87 3.85
1622 3407 4.455606 GCTGGATTGTTAGCATTAGGTCT 58.544 43.478 0.00 0.00 39.67 3.85
1623 3408 4.513318 GCTGGATTGTTAGCATTAGGTCTC 59.487 45.833 0.00 0.00 39.67 3.36
1636 3421 2.751166 AGGTCTCATCTCGTTGGTTG 57.249 50.000 0.00 0.00 0.00 3.77
1638 3423 1.002087 GGTCTCATCTCGTTGGTTGGT 59.998 52.381 0.00 0.00 0.00 3.67
1640 3425 3.306502 GGTCTCATCTCGTTGGTTGGTTA 60.307 47.826 0.00 0.00 0.00 2.85
1641 3426 3.927142 GTCTCATCTCGTTGGTTGGTTAG 59.073 47.826 0.00 0.00 0.00 2.34
1642 3427 3.830178 TCTCATCTCGTTGGTTGGTTAGA 59.170 43.478 0.00 0.00 0.00 2.10
1643 3428 4.466370 TCTCATCTCGTTGGTTGGTTAGAT 59.534 41.667 0.00 0.00 0.00 1.98
1647 3434 2.747446 CTCGTTGGTTGGTTAGATTGGG 59.253 50.000 0.00 0.00 0.00 4.12
1652 3439 1.639108 GGTTGGTTAGATTGGGGGAGT 59.361 52.381 0.00 0.00 0.00 3.85
1657 3444 2.644676 GTTAGATTGGGGGAGTTGCTC 58.355 52.381 0.00 0.00 0.00 4.26
1658 3445 1.965414 TAGATTGGGGGAGTTGCTCA 58.035 50.000 0.00 0.00 31.08 4.26
1664 3451 2.753029 GGGAGTTGCTCACCTGCT 59.247 61.111 0.00 0.00 31.08 4.24
1705 3492 2.203126 GGAGATCCCAAGCGCCAG 60.203 66.667 2.29 0.00 30.18 4.85
1722 3509 1.373497 AGTTCTGCCGCTCTGTTCG 60.373 57.895 0.00 0.00 0.00 3.95
1737 3524 1.881324 TGTTCGGAAATTTCGGGGAAC 59.119 47.619 25.66 25.66 35.25 3.62
1815 3602 3.753305 CGTATACGCTGTGCTATTGTG 57.247 47.619 13.08 0.00 0.00 3.33
1818 3605 3.526931 ATACGCTGTGCTATTGTGACT 57.473 42.857 0.00 0.00 0.00 3.41
1829 3618 3.250762 GCTATTGTGACTGTTTGTGCAGA 59.749 43.478 0.00 0.00 39.62 4.26
1922 3735 6.569418 GCACTTCTCTTTGATTTCCTTCCTTC 60.569 42.308 0.00 0.00 0.00 3.46
1924 3737 6.939730 ACTTCTCTTTGATTTCCTTCCTTCTC 59.060 38.462 0.00 0.00 0.00 2.87
1926 3739 6.706295 TCTCTTTGATTTCCTTCCTTCTCTC 58.294 40.000 0.00 0.00 0.00 3.20
1927 3740 6.500049 TCTCTTTGATTTCCTTCCTTCTCTCT 59.500 38.462 0.00 0.00 0.00 3.10
1928 3741 6.706295 TCTTTGATTTCCTTCCTTCTCTCTC 58.294 40.000 0.00 0.00 0.00 3.20
1929 3742 6.500049 TCTTTGATTTCCTTCCTTCTCTCTCT 59.500 38.462 0.00 0.00 0.00 3.10
1930 3743 5.930837 TGATTTCCTTCCTTCTCTCTCTC 57.069 43.478 0.00 0.00 0.00 3.20
1931 3744 5.588845 TGATTTCCTTCCTTCTCTCTCTCT 58.411 41.667 0.00 0.00 0.00 3.10
1938 3751 5.359194 TTCCTTCTCTCTCTCTCTCTCTC 57.641 47.826 0.00 0.00 0.00 3.20
1939 3752 4.624913 TCCTTCTCTCTCTCTCTCTCTCT 58.375 47.826 0.00 0.00 0.00 3.10
1940 3753 4.651503 TCCTTCTCTCTCTCTCTCTCTCTC 59.348 50.000 0.00 0.00 0.00 3.20
1942 3755 2.959030 TCTCTCTCTCTCTCTCTCTCGG 59.041 54.545 0.00 0.00 0.00 4.63
1945 3758 3.889538 TCTCTCTCTCTCTCTCTCGGTAG 59.110 52.174 0.00 0.00 0.00 3.18
1956 3769 3.466791 CTCGGTAGGCATGGCAGGG 62.467 68.421 22.64 7.61 0.00 4.45
1957 3770 3.797353 CGGTAGGCATGGCAGGGT 61.797 66.667 22.64 2.71 0.00 4.34
1960 3773 0.250901 GGTAGGCATGGCAGGGTATG 60.251 60.000 22.64 0.00 0.00 2.39
1985 3798 5.689383 CCCCCAAACGTAGAATCATAATG 57.311 43.478 0.00 0.00 0.00 1.90
1986 3799 4.518970 CCCCCAAACGTAGAATCATAATGG 59.481 45.833 0.00 0.00 0.00 3.16
2021 3834 9.471084 TCATTTATGTCGTTATCATTATGTCGT 57.529 29.630 0.00 0.00 0.00 4.34
2048 3915 7.120923 TCAATTATGACTACCAGTTACTCCC 57.879 40.000 0.00 0.00 0.00 4.30
2049 3916 6.901300 TCAATTATGACTACCAGTTACTCCCT 59.099 38.462 0.00 0.00 0.00 4.20
2051 3918 3.097342 TGACTACCAGTTACTCCCTCC 57.903 52.381 0.00 0.00 0.00 4.30
2052 3919 2.380932 TGACTACCAGTTACTCCCTCCA 59.619 50.000 0.00 0.00 0.00 3.86
2053 3920 3.012502 TGACTACCAGTTACTCCCTCCAT 59.987 47.826 0.00 0.00 0.00 3.41
2054 3921 3.637694 GACTACCAGTTACTCCCTCCATC 59.362 52.174 0.00 0.00 0.00 3.51
2055 3922 1.880941 ACCAGTTACTCCCTCCATCC 58.119 55.000 0.00 0.00 0.00 3.51
2056 3923 1.132500 CCAGTTACTCCCTCCATCCC 58.868 60.000 0.00 0.00 0.00 3.85
2057 3924 1.625228 CCAGTTACTCCCTCCATCCCA 60.625 57.143 0.00 0.00 0.00 4.37
2058 3925 2.196595 CAGTTACTCCCTCCATCCCAA 58.803 52.381 0.00 0.00 0.00 4.12
2059 3926 2.576191 CAGTTACTCCCTCCATCCCAAA 59.424 50.000 0.00 0.00 0.00 3.28
2060 3927 3.010138 CAGTTACTCCCTCCATCCCAAAA 59.990 47.826 0.00 0.00 0.00 2.44
2061 3928 3.858638 AGTTACTCCCTCCATCCCAAAAT 59.141 43.478 0.00 0.00 0.00 1.82
2062 3929 4.294970 AGTTACTCCCTCCATCCCAAAATT 59.705 41.667 0.00 0.00 0.00 1.82
2063 3930 3.388552 ACTCCCTCCATCCCAAAATTC 57.611 47.619 0.00 0.00 0.00 2.17
2064 3931 2.929043 ACTCCCTCCATCCCAAAATTCT 59.071 45.455 0.00 0.00 0.00 2.40
2065 3932 3.337909 ACTCCCTCCATCCCAAAATTCTT 59.662 43.478 0.00 0.00 0.00 2.52
2066 3933 3.703052 CTCCCTCCATCCCAAAATTCTTG 59.297 47.826 0.00 0.00 0.00 3.02
2067 3934 3.077391 TCCCTCCATCCCAAAATTCTTGT 59.923 43.478 0.00 0.00 0.00 3.16
2068 3935 3.448660 CCCTCCATCCCAAAATTCTTGTC 59.551 47.826 0.00 0.00 0.00 3.18
2069 3936 4.347607 CCTCCATCCCAAAATTCTTGTCT 58.652 43.478 0.00 0.00 0.00 3.41
2070 3937 4.774200 CCTCCATCCCAAAATTCTTGTCTT 59.226 41.667 0.00 0.00 0.00 3.01
2071 3938 5.951747 CCTCCATCCCAAAATTCTTGTCTTA 59.048 40.000 0.00 0.00 0.00 2.10
2072 3939 6.096001 CCTCCATCCCAAAATTCTTGTCTTAG 59.904 42.308 0.00 0.00 0.00 2.18
2073 3940 6.789268 TCCATCCCAAAATTCTTGTCTTAGA 58.211 36.000 0.00 0.00 0.00 2.10
2074 3941 7.413446 TCCATCCCAAAATTCTTGTCTTAGAT 58.587 34.615 0.00 0.00 0.00 1.98
2075 3942 7.895429 TCCATCCCAAAATTCTTGTCTTAGATT 59.105 33.333 0.00 0.00 0.00 2.40
2076 3943 8.534496 CCATCCCAAAATTCTTGTCTTAGATTT 58.466 33.333 0.00 0.00 0.00 2.17
2077 3944 9.362539 CATCCCAAAATTCTTGTCTTAGATTTG 57.637 33.333 0.00 0.00 29.84 2.32
2078 3945 8.477419 TCCCAAAATTCTTGTCTTAGATTTGT 57.523 30.769 0.00 0.00 28.79 2.83
2079 3946 8.576442 TCCCAAAATTCTTGTCTTAGATTTGTC 58.424 33.333 0.00 0.00 28.79 3.18
2080 3947 8.579863 CCCAAAATTCTTGTCTTAGATTTGTCT 58.420 33.333 0.00 0.00 28.79 3.41
2150 4023 4.053295 GTGCTTGTCATGCAACAATTTCT 58.947 39.130 14.43 0.00 42.41 2.52
2153 4026 5.221204 TGCTTGTCATGCAACAATTTCTGTA 60.221 36.000 10.76 0.00 38.41 2.74
2164 4037 6.304683 GCAACAATTTCTGTATTACACGTTCC 59.695 38.462 0.00 0.00 37.23 3.62
2194 4067 3.496130 CGTCCTTGTCAGAATGGATATGC 59.504 47.826 0.00 0.00 36.16 3.14
2209 4082 1.593196 TATGCTATCGTTGGCTTGGC 58.407 50.000 3.41 0.00 0.00 4.52
2253 4180 2.029290 GTCGTTTCCTCTAGCACTCCAA 60.029 50.000 0.00 0.00 0.00 3.53
2299 4226 5.047802 ACAAAATTCCACAGATGCTACTTGG 60.048 40.000 0.00 0.00 0.00 3.61
2330 4257 7.148755 GCATAGTTTTGGCTGTAGATTTGTTTG 60.149 37.037 0.00 0.00 0.00 2.93
2367 4294 0.741221 GGATGCGTGTCTGAACCCTC 60.741 60.000 0.00 0.00 0.00 4.30
2369 4296 2.432628 GCGTGTCTGAACCCTCGG 60.433 66.667 0.00 0.00 0.00 4.63
2393 4320 5.634896 CAGAAACTGAATGCTTACATGTCC 58.365 41.667 0.00 0.00 36.36 4.02
2449 4376 3.795688 TTTCCTGAATGAGGTGCTCTT 57.204 42.857 0.00 0.00 43.37 2.85
2491 4449 0.040514 CTGAATTGGTTTCGCGCACA 60.041 50.000 8.75 0.00 37.13 4.57
2495 4453 1.573829 ATTGGTTTCGCGCACACGAT 61.574 50.000 8.75 0.00 42.54 3.73
2505 4463 4.178255 CACACGATGCGACGCGAC 62.178 66.667 15.93 5.54 36.70 5.19
2531 4501 1.757682 TTTTTGTGCGAGTTCCCTGT 58.242 45.000 0.00 0.00 0.00 4.00
2613 4583 2.833227 CTGGTTCGTTCCCCACCA 59.167 61.111 0.00 0.00 38.30 4.17
2633 4603 1.247567 ATTTGGTGGTTTGGAGCTCG 58.752 50.000 7.83 0.00 0.00 5.03
2638 4608 1.646189 GTGGTTTGGAGCTCGATCTC 58.354 55.000 7.83 7.76 0.00 2.75
2653 4623 2.852495 ATCTCGCGCCGGATTGTGTT 62.852 55.000 5.05 0.00 0.00 3.32
2656 4626 2.677003 CGCGCCGGATTGTGTTTCT 61.677 57.895 5.05 0.00 0.00 2.52
2663 4633 0.804989 GGATTGTGTTTCTCCCGCTG 59.195 55.000 0.00 0.00 0.00 5.18
2678 4648 4.575885 TCCCGCTGGATTATTAGCATTAC 58.424 43.478 0.00 0.00 39.87 1.89
2682 4652 4.451096 CGCTGGATTATTAGCATTACGGTT 59.549 41.667 0.00 0.00 39.87 4.44
2689 4659 7.064728 GGATTATTAGCATTACGGTTGATCTCC 59.935 40.741 0.00 0.00 0.00 3.71
2690 4660 2.622064 AGCATTACGGTTGATCTCCC 57.378 50.000 0.00 0.00 0.00 4.30
2695 4665 2.202932 CGGTTGATCTCCCGCTGG 60.203 66.667 10.06 0.00 37.43 4.85
2696 4666 2.721167 CGGTTGATCTCCCGCTGGA 61.721 63.158 10.06 0.00 37.43 3.86
2697 4667 1.832912 GGTTGATCTCCCGCTGGAT 59.167 57.895 0.00 0.00 40.80 3.41
2699 4669 1.416401 GGTTGATCTCCCGCTGGATTA 59.584 52.381 0.00 0.00 40.80 1.75
2700 4670 2.039084 GGTTGATCTCCCGCTGGATTAT 59.961 50.000 0.00 0.00 40.80 1.28
2701 4671 3.496870 GGTTGATCTCCCGCTGGATTATT 60.497 47.826 0.00 0.00 40.80 1.40
2702 4672 4.262894 GGTTGATCTCCCGCTGGATTATTA 60.263 45.833 0.00 0.00 40.80 0.98
2740 4719 3.008923 TGACCTGCTGTGGTGATTAATCA 59.991 43.478 14.23 14.23 41.00 2.57
2756 4735 5.545658 TTAATCACGTTGCTTGGAGATTC 57.454 39.130 0.00 0.00 0.00 2.52
2800 4782 4.706962 GCTCTGTACAGAAAATTTGGGGAT 59.293 41.667 25.14 0.00 36.94 3.85
2802 4784 6.139679 TCTGTACAGAAAATTTGGGGATCT 57.860 37.500 23.24 0.00 33.91 2.75
2803 4785 5.945784 TCTGTACAGAAAATTTGGGGATCTG 59.054 40.000 23.24 13.02 42.43 2.90
2804 4786 5.016173 TGTACAGAAAATTTGGGGATCTGG 58.984 41.667 17.08 4.30 41.34 3.86
2885 4909 8.200120 AGTTCTCTTTGATTTCCTTCCTTTTTG 58.800 33.333 0.00 0.00 0.00 2.44
2886 4910 7.660030 TCTCTTTGATTTCCTTCCTTTTTGT 57.340 32.000 0.00 0.00 0.00 2.83
2896 4920 3.412386 CTTCCTTTTTGTCCCTCACGAT 58.588 45.455 0.00 0.00 0.00 3.73
2902 4926 3.663995 TTTGTCCCTCACGATTTACGA 57.336 42.857 0.00 0.00 45.77 3.43
2918 4942 5.365403 TTTACGATTGGCAAGTAAACCTG 57.635 39.130 16.38 0.38 35.99 4.00
2930 4954 5.682862 GCAAGTAAACCTGAAATATGCATCG 59.317 40.000 0.19 0.00 0.00 3.84
2961 4985 9.314321 TCACGTAAATGATCTAGAGAAAATTCC 57.686 33.333 0.00 0.00 0.00 3.01
2962 4986 8.552034 CACGTAAATGATCTAGAGAAAATTCCC 58.448 37.037 0.00 0.00 0.00 3.97
2964 4988 7.715249 CGTAAATGATCTAGAGAAAATTCCCCA 59.285 37.037 0.00 0.00 0.00 4.96
3023 5084 0.539669 CCCCTCCTTTTCAGCCGTTT 60.540 55.000 0.00 0.00 0.00 3.60
3125 5186 9.692325 AAGATAAAATTACAAAGCAGATCTCCT 57.308 29.630 0.00 0.00 0.00 3.69
3145 5206 7.807198 TCTCCTAGACAACATCTACAGTAGAT 58.193 38.462 16.34 16.34 46.06 1.98
3158 5219 7.435068 TCTACAGTAGATGGCAAAGAAAAAC 57.565 36.000 6.15 0.00 0.00 2.43
3160 5221 5.140454 ACAGTAGATGGCAAAGAAAAACCT 58.860 37.500 0.00 0.00 0.00 3.50
3164 5225 7.809806 CAGTAGATGGCAAAGAAAAACCTTTAG 59.190 37.037 0.00 0.00 34.85 1.85
3165 5226 6.976934 AGATGGCAAAGAAAAACCTTTAGA 57.023 33.333 0.00 0.00 34.85 2.10
3169 5230 7.841915 TGGCAAAGAAAAACCTTTAGAAAAG 57.158 32.000 0.00 0.00 34.85 2.27
3248 5330 4.215185 GGCTTCTTGTCTTTCTTCTGAAGG 59.785 45.833 16.83 2.01 33.28 3.46
3252 5334 6.927294 TCTTGTCTTTCTTCTGAAGGTTTC 57.073 37.500 16.83 5.79 33.28 2.78
3264 5347 2.218603 GAAGGTTTCTCTTTGCCGTCA 58.781 47.619 0.00 0.00 31.45 4.35
3270 5353 2.325583 TCTCTTTGCCGTCAACTGTT 57.674 45.000 0.00 0.00 30.75 3.16
3298 5391 5.450376 TGTCGATCTGCTTCGTAATTTTC 57.550 39.130 0.00 0.00 40.03 2.29
3304 5397 8.879759 TCGATCTGCTTCGTAATTTTCTTTTAT 58.120 29.630 0.00 0.00 40.03 1.40
3331 5424 0.109689 CGTCGTCGAGCCTTCTTCTT 60.110 55.000 0.00 0.00 39.71 2.52
3377 5470 0.466922 AGCTATCCATGGCTGGTTGC 60.467 55.000 6.96 5.80 43.33 4.17
3397 5490 4.351054 CGGCTGCAAAGGAGGGGT 62.351 66.667 0.50 0.00 0.00 4.95
3404 5497 1.928567 CAAAGGAGGGGTGGCCCTA 60.929 63.158 0.00 0.00 44.66 3.53
3409 5502 3.622263 AGGGGTGGCCCTAGTCCA 61.622 66.667 0.00 0.00 44.66 4.02
3435 5528 8.099364 TCGAGAGAAACAAATCAGCTTTAAAT 57.901 30.769 0.00 0.00 37.03 1.40
3438 5531 9.267096 GAGAGAAACAAATCAGCTTTAAATACG 57.733 33.333 0.00 0.00 0.00 3.06
3475 5568 2.088950 GCATGCAGCAAAAGAATGGT 57.911 45.000 14.21 0.00 44.79 3.55
3498 5591 8.081633 TGGTAAAACAAAAATCACAGCATAGAG 58.918 33.333 0.00 0.00 0.00 2.43
3584 5677 6.450545 TGTTGTGTGATGTGAACAAAAAGAA 58.549 32.000 0.00 0.00 35.70 2.52
3595 5692 4.394920 TGAACAAAAAGAAAGAGAGCGTGT 59.605 37.500 0.00 0.00 0.00 4.49
3597 5694 3.001330 ACAAAAAGAAAGAGAGCGTGTCG 59.999 43.478 0.00 0.00 0.00 4.35
3621 5719 0.695462 TGGGCACTGCTAGGGATCAT 60.695 55.000 0.00 0.00 0.00 2.45
3663 5789 1.669265 GATAGTAAAACGTGGGCTGGC 59.331 52.381 0.00 0.00 0.00 4.85
3664 5790 0.671163 TAGTAAAACGTGGGCTGGCG 60.671 55.000 0.00 0.00 0.00 5.69
3665 5791 2.111460 TAAAACGTGGGCTGGCGT 59.889 55.556 0.00 0.00 43.64 5.68
3666 5792 2.255172 TAAAACGTGGGCTGGCGTG 61.255 57.895 0.00 0.00 41.42 5.34
3776 5902 0.514255 TCACGGTCACGAGTTACGAG 59.486 55.000 0.00 0.00 45.77 4.18
3777 5903 0.514255 CACGGTCACGAGTTACGAGA 59.486 55.000 0.00 0.00 45.77 4.04
3778 5904 1.129998 CACGGTCACGAGTTACGAGAT 59.870 52.381 0.00 0.00 45.77 2.75
3779 5905 2.349580 CACGGTCACGAGTTACGAGATA 59.650 50.000 0.00 0.00 45.77 1.98
3781 5907 2.596112 CGGTCACGAGTTACGAGATACG 60.596 54.545 0.00 0.00 45.77 3.06
3804 5930 8.327941 ACGATTGTTATCAGATTGATTATGGG 57.672 34.615 0.00 0.00 38.26 4.00
3934 6060 1.180029 GTGGGATGCTGACAATGCTT 58.820 50.000 0.00 0.00 0.00 3.91
3952 6078 2.006888 CTTGCGTGTATCGGAACCATT 58.993 47.619 0.00 0.00 44.23 3.16
3994 6120 4.223923 CCAGTCTATGAGGAGGTTTGTCTT 59.776 45.833 0.00 0.00 0.00 3.01
4012 6138 1.349026 CTTGCCTTCTTCTCCTGACCA 59.651 52.381 0.00 0.00 0.00 4.02
4027 6153 5.875224 TCCTGACCATGATAACTTGTTTGA 58.125 37.500 0.00 0.00 0.00 2.69
4029 6155 6.947733 TCCTGACCATGATAACTTGTTTGATT 59.052 34.615 0.00 0.00 0.00 2.57
4030 6156 8.106462 TCCTGACCATGATAACTTGTTTGATTA 58.894 33.333 0.00 0.00 0.00 1.75
4516 6753 6.959639 TTTTCCTACATTGTCTGCTCTTTT 57.040 33.333 0.00 0.00 0.00 2.27
4559 6801 8.038351 GTCTTTTAAGGGATGCTATCTAGATCC 58.962 40.741 8.95 4.54 35.78 3.36
4780 7209 0.614812 TGCTGCTCAATGCTCACCTA 59.385 50.000 0.00 0.00 43.37 3.08
4785 7214 3.273434 TGCTCAATGCTCACCTATGTTC 58.727 45.455 0.00 0.00 43.37 3.18
4791 7220 3.719268 TGCTCACCTATGTTCCACATT 57.281 42.857 0.00 0.00 39.88 2.71
4837 7267 1.027357 ACTTGCTTGTTGCTCTGTGG 58.973 50.000 0.00 0.00 43.37 4.17
4883 7313 2.750237 GGAACCGCCATCGCCTTT 60.750 61.111 0.00 0.00 36.34 3.11
5037 7685 4.008330 CAGCTTCATGTTTGAGGTGAGAT 58.992 43.478 11.86 0.00 33.84 2.75
5053 7701 4.521130 TGAGATACACACTGTGAGGAAC 57.479 45.455 16.30 1.84 36.96 3.62
5056 7708 0.677288 TACACACTGTGAGGAACCCG 59.323 55.000 16.30 0.00 36.96 5.28
5066 7718 3.656045 GGAACCCGCCACACAACG 61.656 66.667 0.00 0.00 0.00 4.10
5082 7734 5.006068 CACACAACGGAGATCATTCATACAG 59.994 44.000 0.00 0.00 0.00 2.74
5156 7808 5.221441 GGTTTACTTTGGCCTGTTGATCTTT 60.221 40.000 3.32 0.00 0.00 2.52
5332 8266 1.273838 TGCCTACTCATCCTCCACCTT 60.274 52.381 0.00 0.00 0.00 3.50
5333 8267 2.023404 TGCCTACTCATCCTCCACCTTA 60.023 50.000 0.00 0.00 0.00 2.69
5334 8268 2.365941 GCCTACTCATCCTCCACCTTAC 59.634 54.545 0.00 0.00 0.00 2.34
5351 8285 3.578282 CCTTACCTGGTTGCCAAAATTCT 59.422 43.478 3.84 0.00 30.80 2.40
5359 8293 5.465935 TGGTTGCCAAAATTCTATTCGTTC 58.534 37.500 0.00 0.00 0.00 3.95
5372 8306 9.650539 AATTCTATTCGTTCTGATATGATCTGG 57.349 33.333 0.00 0.00 0.00 3.86
5401 8335 3.349006 GGCTGACGGTGCTGTGTG 61.349 66.667 0.00 0.00 0.00 3.82
5528 8465 2.356780 GCCGCTACTGGTACCACCT 61.357 63.158 11.60 1.09 39.58 4.00
5573 8520 0.535102 AAGCTGGCGCAGTAACTTGT 60.535 50.000 10.83 0.00 39.10 3.16
5600 8547 1.444836 CCACCCTTGTTAATTCGCGA 58.555 50.000 3.71 3.71 0.00 5.87
5601 8548 2.014128 CCACCCTTGTTAATTCGCGAT 58.986 47.619 10.88 0.00 0.00 4.58
5602 8549 2.031683 CCACCCTTGTTAATTCGCGATC 59.968 50.000 10.88 0.00 0.00 3.69
5603 8550 2.936498 CACCCTTGTTAATTCGCGATCT 59.064 45.455 10.88 2.04 0.00 2.75
5604 8551 2.936498 ACCCTTGTTAATTCGCGATCTG 59.064 45.455 10.88 0.00 0.00 2.90
5605 8552 2.936498 CCCTTGTTAATTCGCGATCTGT 59.064 45.455 10.88 0.00 0.00 3.41
5606 8553 3.242413 CCCTTGTTAATTCGCGATCTGTG 60.242 47.826 10.88 0.00 0.00 3.66
5681 8631 1.424493 CTGCGTTCCGGATCTCTTGC 61.424 60.000 4.15 3.97 0.00 4.01
5693 8643 3.368531 GGATCTCTTGCGTTCCTGTTACT 60.369 47.826 0.00 0.00 0.00 2.24
5697 8647 2.364324 TCTTGCGTTCCTGTTACTGTCT 59.636 45.455 0.00 0.00 0.00 3.41
5752 8703 0.924090 CGAAGAACATGGCTACGCTC 59.076 55.000 0.00 0.00 0.00 5.03
5754 8705 0.530744 AAGAACATGGCTACGCTCGA 59.469 50.000 0.00 0.00 0.00 4.04
5766 8731 2.094659 CGCTCGATTGTGGCTCGTT 61.095 57.895 0.00 0.00 37.40 3.85
5801 8767 6.940831 TGTGATGTGTCTCATTTCTTTTGA 57.059 33.333 0.00 0.00 36.83 2.69
5844 8810 1.946768 GTACTGCAGGTTGTTGAGCAA 59.053 47.619 19.93 0.00 36.44 3.91
5865 8831 1.453155 GCCTGTCCGATTGTGATGTT 58.547 50.000 0.00 0.00 0.00 2.71
5867 8833 2.698803 CCTGTCCGATTGTGATGTTCA 58.301 47.619 0.00 0.00 0.00 3.18
5882 8848 2.042464 TGTTCACCTGTGCTCTTCTCT 58.958 47.619 0.00 0.00 0.00 3.10
5890 8856 1.409064 TGTGCTCTTCTCTTGTCGTGT 59.591 47.619 0.00 0.00 0.00 4.49
5895 8861 3.717707 CTCTTCTCTTGTCGTGTTTCCA 58.282 45.455 0.00 0.00 0.00 3.53
5909 8875 1.001633 GTTTCCAGGTAGTTGGCTCGA 59.998 52.381 0.00 0.00 38.16 4.04
5970 8936 2.251818 GGCCAGGCATCTGATAGTAGA 58.748 52.381 15.19 0.00 43.49 2.59
5975 8941 3.573538 CAGGCATCTGATAGTAGAGCTGT 59.426 47.826 0.00 0.00 43.49 4.40
5976 8942 4.764308 CAGGCATCTGATAGTAGAGCTGTA 59.236 45.833 0.00 0.00 43.49 2.74
5977 8943 5.242615 CAGGCATCTGATAGTAGAGCTGTAA 59.757 44.000 0.00 0.00 43.49 2.41
5978 8944 5.835819 AGGCATCTGATAGTAGAGCTGTAAA 59.164 40.000 0.00 0.00 0.00 2.01
5980 8946 6.422400 GGCATCTGATAGTAGAGCTGTAAAAC 59.578 42.308 0.00 0.00 0.00 2.43
5981 8947 7.206687 GCATCTGATAGTAGAGCTGTAAAACT 58.793 38.462 0.00 0.00 0.00 2.66
5983 8949 9.891828 CATCTGATAGTAGAGCTGTAAAACTAG 57.108 37.037 0.00 0.00 0.00 2.57
5985 8951 9.463902 TCTGATAGTAGAGCTGTAAAACTAGTT 57.536 33.333 1.12 1.12 0.00 2.24
6004 8970 1.677637 TTTTCCCCAACGTGGTTGCC 61.678 55.000 3.03 0.00 41.62 4.52
6020 8986 2.739287 CCGCGTCCGCCAGTTTTA 60.739 61.111 4.92 0.00 37.98 1.52
6021 8987 2.736682 CCGCGTCCGCCAGTTTTAG 61.737 63.158 4.92 0.00 37.98 1.85
6022 8988 2.736682 CGCGTCCGCCAGTTTTAGG 61.737 63.158 6.04 0.00 37.98 2.69
6023 8989 2.396157 GCGTCCGCCAGTTTTAGGG 61.396 63.158 0.00 0.00 34.56 3.53
6024 8990 2.396157 CGTCCGCCAGTTTTAGGGC 61.396 63.158 0.00 0.00 46.80 5.19
6028 8994 4.074647 GCCAGTTTTAGGGCGTGT 57.925 55.556 0.00 0.00 40.93 4.49
6029 8995 2.337361 GCCAGTTTTAGGGCGTGTT 58.663 52.632 0.00 0.00 40.93 3.32
6030 8996 0.671796 GCCAGTTTTAGGGCGTGTTT 59.328 50.000 0.00 0.00 40.93 2.83
6031 8997 1.601914 GCCAGTTTTAGGGCGTGTTTG 60.602 52.381 0.00 0.00 40.93 2.93
6032 8998 1.000717 CCAGTTTTAGGGCGTGTTTGG 60.001 52.381 0.00 0.00 0.00 3.28
6033 8999 1.679153 CAGTTTTAGGGCGTGTTTGGT 59.321 47.619 0.00 0.00 0.00 3.67
6034 9000 2.100087 CAGTTTTAGGGCGTGTTTGGTT 59.900 45.455 0.00 0.00 0.00 3.67
6035 9001 2.100087 AGTTTTAGGGCGTGTTTGGTTG 59.900 45.455 0.00 0.00 0.00 3.77
6036 9002 0.386113 TTTAGGGCGTGTTTGGTTGC 59.614 50.000 0.00 0.00 0.00 4.17
6037 9003 0.752009 TTAGGGCGTGTTTGGTTGCA 60.752 50.000 0.00 0.00 0.00 4.08
6038 9004 0.752009 TAGGGCGTGTTTGGTTGCAA 60.752 50.000 0.00 0.00 0.00 4.08
6039 9005 1.068921 GGGCGTGTTTGGTTGCAAT 59.931 52.632 0.59 0.00 0.00 3.56
6040 9006 0.315568 GGGCGTGTTTGGTTGCAATA 59.684 50.000 0.59 0.00 0.00 1.90
6041 9007 1.668628 GGGCGTGTTTGGTTGCAATAG 60.669 52.381 0.59 0.00 0.00 1.73
6042 9008 1.000717 GGCGTGTTTGGTTGCAATAGT 60.001 47.619 0.59 0.00 0.00 2.12
6043 9009 2.050691 GCGTGTTTGGTTGCAATAGTG 58.949 47.619 0.59 0.00 0.00 2.74
6044 9010 2.287308 GCGTGTTTGGTTGCAATAGTGA 60.287 45.455 0.59 0.00 0.00 3.41
6049 9015 5.752955 GTGTTTGGTTGCAATAGTGAACAAT 59.247 36.000 0.59 0.00 0.00 2.71
6056 9022 7.010923 TGGTTGCAATAGTGAACAATTTGTTTC 59.989 33.333 15.54 11.77 41.28 2.78
6065 9031 5.571357 GTGAACAATTTGTTTCGTTGTCTGT 59.429 36.000 15.54 0.00 41.28 3.41
6075 9041 1.899814 TCGTTGTCTGTATGCCCTCTT 59.100 47.619 0.00 0.00 0.00 2.85
6076 9042 2.002586 CGTTGTCTGTATGCCCTCTTG 58.997 52.381 0.00 0.00 0.00 3.02
6077 9043 1.740025 GTTGTCTGTATGCCCTCTTGC 59.260 52.381 0.00 0.00 0.00 4.01
6078 9044 0.253044 TGTCTGTATGCCCTCTTGCC 59.747 55.000 0.00 0.00 0.00 4.52
6096 9062 1.045407 CCTGCATGCATGGGCTAAAT 58.955 50.000 27.34 0.00 41.91 1.40
6114 9080 7.212274 GGCTAAATCACATTGCCTGATATTTT 58.788 34.615 0.00 0.00 40.36 1.82
6119 9085 6.343716 TCACATTGCCTGATATTTTGTTGT 57.656 33.333 0.00 0.00 0.00 3.32
6150 9117 3.897239 AGTGAACAAACCCAAGACATGA 58.103 40.909 0.00 0.00 0.00 3.07
6151 9118 3.632145 AGTGAACAAACCCAAGACATGAC 59.368 43.478 0.00 0.00 0.00 3.06
6152 9119 3.380004 GTGAACAAACCCAAGACATGACA 59.620 43.478 0.00 0.00 0.00 3.58
6153 9120 4.037923 GTGAACAAACCCAAGACATGACAT 59.962 41.667 0.00 0.00 0.00 3.06
6154 9121 4.037803 TGAACAAACCCAAGACATGACATG 59.962 41.667 14.02 14.02 0.00 3.21
6155 9122 2.892852 ACAAACCCAAGACATGACATGG 59.107 45.455 19.39 11.73 33.60 3.66
6156 9123 2.892852 CAAACCCAAGACATGACATGGT 59.107 45.455 19.39 3.82 33.60 3.55
6160 9127 4.735369 ACCCAAGACATGACATGGTTTTA 58.265 39.130 19.39 0.00 33.60 1.52
6161 9128 5.144100 ACCCAAGACATGACATGGTTTTAA 58.856 37.500 19.39 0.00 33.60 1.52
6166 9133 7.116662 CCAAGACATGACATGGTTTTAATTGTG 59.883 37.037 19.39 3.33 33.60 3.33
6182 9149 2.439338 TGTGCAACGCCTGGTGTT 60.439 55.556 19.45 19.45 42.39 3.32
6191 9158 1.539827 ACGCCTGGTGTTTGCTAATTC 59.460 47.619 7.16 0.00 0.00 2.17
6215 9182 5.499004 TTTGGCTAGTTGATGAGGTTACT 57.501 39.130 0.00 0.00 0.00 2.24
6227 9194 3.151554 TGAGGTTACTAGCACACTTCGA 58.848 45.455 0.00 0.00 0.00 3.71
6237 9204 2.139917 GCACACTTCGACACAACCATA 58.860 47.619 0.00 0.00 0.00 2.74
6278 9263 6.047870 CAGAGCAGAGTATAAACAGAGCATT 58.952 40.000 0.00 0.00 0.00 3.56
6381 9378 4.143543 AGACCCGATAGTACTTAGGAAGC 58.856 47.826 0.00 0.00 0.00 3.86
6387 9384 4.338682 CGATAGTACTTAGGAAGCAGGTGT 59.661 45.833 0.00 0.00 0.00 4.16
6390 9387 2.031495 ACTTAGGAAGCAGGTGTCCT 57.969 50.000 8.02 8.02 46.29 3.85
6454 9451 4.624015 CATTTGTTGACAACCTCAATGCT 58.376 39.130 15.59 0.00 41.10 3.79
6455 9452 3.713858 TTGTTGACAACCTCAATGCTG 57.286 42.857 15.59 0.00 41.10 4.41
6476 9473 3.850122 TCGTTGTCGAAGATGATGACT 57.150 42.857 0.00 0.00 43.34 3.41
6511 9508 1.620819 AGTGAGGAGCTTGAACGTCAT 59.379 47.619 0.00 0.00 34.38 3.06
6517 9514 2.094894 GGAGCTTGAACGTCATCATGTG 59.905 50.000 0.00 0.00 0.00 3.21
6535 9532 2.965147 TGTGGCCGATCTTGATCTGATA 59.035 45.455 0.00 0.00 0.00 2.15
6544 9541 5.699915 CGATCTTGATCTGATAAATGGCTGT 59.300 40.000 8.70 0.00 0.00 4.40
6662 9681 1.685224 GTGAAGTCCAGGGGCATGA 59.315 57.895 0.00 0.00 0.00 3.07
6667 9686 0.268869 AGTCCAGGGGCATGAGGATA 59.731 55.000 0.00 0.00 31.91 2.59
6763 9793 2.720144 CTTGTTGCTGGGGGCTCCTT 62.720 60.000 4.32 0.00 42.39 3.36
6817 9847 2.602267 TTCTTCCTCGGCGGTGGA 60.602 61.111 16.17 16.17 34.12 4.02
6860 9890 2.403252 ACCTCCGACATTGGATGAAC 57.597 50.000 0.00 0.00 37.41 3.18
6862 9892 1.134818 CCTCCGACATTGGATGAACGA 60.135 52.381 0.00 0.00 37.41 3.85
6863 9893 1.927174 CTCCGACATTGGATGAACGAC 59.073 52.381 0.00 0.00 37.41 4.34
6865 9895 0.645355 CGACATTGGATGAACGACCG 59.355 55.000 0.00 0.00 36.43 4.79
6866 9896 1.006832 GACATTGGATGAACGACCGG 58.993 55.000 0.00 0.00 0.00 5.28
6867 9897 0.392461 ACATTGGATGAACGACCGGG 60.392 55.000 6.32 0.00 0.00 5.73
6868 9898 0.107897 CATTGGATGAACGACCGGGA 60.108 55.000 6.32 0.00 0.00 5.14
6869 9899 0.178068 ATTGGATGAACGACCGGGAG 59.822 55.000 6.32 0.61 0.00 4.30
6870 9900 0.901114 TTGGATGAACGACCGGGAGA 60.901 55.000 6.32 0.00 0.00 3.71
6871 9901 1.141234 GGATGAACGACCGGGAGAC 59.859 63.158 6.32 0.27 0.00 3.36
6883 9913 3.982829 GGAGACCCTTTTCGGTGC 58.017 61.111 0.00 0.00 35.79 5.01
6884 9914 1.375326 GGAGACCCTTTTCGGTGCT 59.625 57.895 0.00 0.00 35.79 4.40
6885 9915 0.250770 GGAGACCCTTTTCGGTGCTT 60.251 55.000 0.00 0.00 35.79 3.91
6886 9916 0.875059 GAGACCCTTTTCGGTGCTTG 59.125 55.000 0.00 0.00 35.79 4.01
6887 9917 1.172812 AGACCCTTTTCGGTGCTTGC 61.173 55.000 0.00 0.00 35.79 4.01
6888 9918 2.142357 GACCCTTTTCGGTGCTTGCC 62.142 60.000 0.00 0.00 35.79 4.52
6889 9919 2.650778 CCTTTTCGGTGCTTGCCC 59.349 61.111 0.00 0.00 0.00 5.36
6890 9920 1.903404 CCTTTTCGGTGCTTGCCCT 60.903 57.895 0.00 0.00 0.00 5.19
6891 9921 1.463553 CCTTTTCGGTGCTTGCCCTT 61.464 55.000 0.00 0.00 0.00 3.95
6892 9922 0.039165 CTTTTCGGTGCTTGCCCTTC 60.039 55.000 0.00 0.00 0.00 3.46
6893 9923 1.791103 TTTTCGGTGCTTGCCCTTCG 61.791 55.000 0.00 0.00 0.00 3.79
6894 9924 4.697756 TCGGTGCTTGCCCTTCGG 62.698 66.667 0.00 0.00 0.00 4.30
6896 9926 3.365265 GGTGCTTGCCCTTCGGTG 61.365 66.667 0.00 0.00 0.00 4.94
6897 9927 4.043200 GTGCTTGCCCTTCGGTGC 62.043 66.667 0.00 0.00 0.00 5.01
6898 9928 4.577677 TGCTTGCCCTTCGGTGCA 62.578 61.111 0.00 0.00 35.27 4.57
6899 9929 3.064324 GCTTGCCCTTCGGTGCAT 61.064 61.111 0.00 0.00 37.33 3.96
6900 9930 3.056313 GCTTGCCCTTCGGTGCATC 62.056 63.158 0.00 0.00 37.33 3.91
6901 9931 1.377725 CTTGCCCTTCGGTGCATCT 60.378 57.895 0.00 0.00 37.33 2.90
6902 9932 0.962356 CTTGCCCTTCGGTGCATCTT 60.962 55.000 0.00 0.00 37.33 2.40
6903 9933 0.960364 TTGCCCTTCGGTGCATCTTC 60.960 55.000 0.00 0.00 37.33 2.87
6904 9934 2.464459 GCCCTTCGGTGCATCTTCG 61.464 63.158 0.00 0.00 0.00 3.79
6905 9935 1.815421 CCCTTCGGTGCATCTTCGG 60.815 63.158 0.00 0.00 0.00 4.30
6906 9936 1.079127 CCTTCGGTGCATCTTCGGT 60.079 57.895 0.00 0.00 0.00 4.69
6907 9937 1.361668 CCTTCGGTGCATCTTCGGTG 61.362 60.000 0.00 0.00 0.00 4.94
6908 9938 1.970917 CTTCGGTGCATCTTCGGTGC 61.971 60.000 0.00 0.00 42.81 5.01
6909 9939 2.434884 CGGTGCATCTTCGGTGCT 60.435 61.111 0.00 0.00 42.92 4.40
6910 9940 2.034879 CGGTGCATCTTCGGTGCTT 61.035 57.895 0.00 0.00 42.92 3.91
6911 9941 1.503542 GGTGCATCTTCGGTGCTTG 59.496 57.895 0.49 0.00 42.92 4.01
6912 9942 1.154150 GTGCATCTTCGGTGCTTGC 60.154 57.895 0.49 0.00 42.92 4.01
6913 9943 2.334946 TGCATCTTCGGTGCTTGCC 61.335 57.895 0.49 0.00 42.92 4.52
6914 9944 2.042831 GCATCTTCGGTGCTTGCCT 61.043 57.895 0.00 0.00 39.45 4.75
6915 9945 1.589716 GCATCTTCGGTGCTTGCCTT 61.590 55.000 0.00 0.00 39.45 4.35
6916 9946 0.449388 CATCTTCGGTGCTTGCCTTC 59.551 55.000 0.00 0.00 0.00 3.46
6917 9947 0.678048 ATCTTCGGTGCTTGCCTTCC 60.678 55.000 0.00 0.00 0.00 3.46
6918 9948 2.668212 TTCGGTGCTTGCCTTCCG 60.668 61.111 12.13 12.13 43.65 4.30
6920 9950 2.436646 CGGTGCTTGCCTTCCGAT 60.437 61.111 12.72 0.00 44.86 4.18
6921 9951 2.753966 CGGTGCTTGCCTTCCGATG 61.754 63.158 12.72 0.00 44.86 3.84
6922 9952 1.377202 GGTGCTTGCCTTCCGATGA 60.377 57.895 0.00 0.00 0.00 2.92
6923 9953 0.749454 GGTGCTTGCCTTCCGATGAT 60.749 55.000 0.00 0.00 0.00 2.45
6924 9954 0.379669 GTGCTTGCCTTCCGATGATG 59.620 55.000 0.00 0.00 0.00 3.07
6925 9955 0.749091 TGCTTGCCTTCCGATGATGG 60.749 55.000 0.00 0.00 38.53 3.51
6926 9956 1.450531 GCTTGCCTTCCGATGATGGG 61.451 60.000 0.00 0.00 36.53 4.00
6927 9957 0.107017 CTTGCCTTCCGATGATGGGT 60.107 55.000 0.00 0.00 36.53 4.51
6928 9958 0.394216 TTGCCTTCCGATGATGGGTG 60.394 55.000 0.00 0.00 36.53 4.61
6929 9959 1.526917 GCCTTCCGATGATGGGTGG 60.527 63.158 0.00 0.00 36.53 4.61
6930 9960 1.526917 CCTTCCGATGATGGGTGGC 60.527 63.158 0.00 0.00 33.24 5.01
6931 9961 1.224315 CTTCCGATGATGGGTGGCA 59.776 57.895 0.00 0.00 0.00 4.92
6932 9962 0.816825 CTTCCGATGATGGGTGGCAG 60.817 60.000 0.00 0.00 0.00 4.85
6933 9963 2.891941 TTCCGATGATGGGTGGCAGC 62.892 60.000 8.47 8.47 0.00 5.25
6934 9964 2.124612 CGATGATGGGTGGCAGCA 60.125 61.111 19.48 5.16 0.00 4.41
6935 9965 2.475466 CGATGATGGGTGGCAGCAC 61.475 63.158 19.48 8.53 0.00 4.40
6936 9966 1.378911 GATGATGGGTGGCAGCACA 60.379 57.895 19.48 13.99 0.00 4.57
6937 9967 0.754217 GATGATGGGTGGCAGCACAT 60.754 55.000 19.48 17.93 0.00 3.21
6938 9968 0.754217 ATGATGGGTGGCAGCACATC 60.754 55.000 26.93 26.93 39.99 3.06
6939 9969 1.077212 GATGGGTGGCAGCACATCT 60.077 57.895 26.63 9.65 37.37 2.90
6940 9970 0.682209 GATGGGTGGCAGCACATCTT 60.682 55.000 26.63 8.98 37.37 2.40
6941 9971 0.682209 ATGGGTGGCAGCACATCTTC 60.682 55.000 19.48 0.00 0.00 2.87
6942 9972 1.303561 GGGTGGCAGCACATCTTCA 60.304 57.895 19.48 0.00 0.00 3.02
6943 9973 1.310933 GGGTGGCAGCACATCTTCAG 61.311 60.000 19.48 0.00 0.00 3.02
6976 10007 2.915659 TCAACGGTCGGGAGCACT 60.916 61.111 0.00 0.00 0.00 4.40
6978 10009 1.180456 TCAACGGTCGGGAGCACTTA 61.180 55.000 0.00 0.00 0.00 2.24
6995 10026 3.949754 CACTTATGTGCCCATCTCATTGT 59.050 43.478 0.00 0.00 37.38 2.71
6999 10030 3.159213 TGTGCCCATCTCATTGTTCTT 57.841 42.857 0.00 0.00 0.00 2.52
7061 10092 7.816513 CACAGAGTTGATGTCTTATTGAAGAGA 59.183 37.037 0.00 0.00 42.46 3.10
7066 10097 9.160496 AGTTGATGTCTTATTGAAGAGAATGTC 57.840 33.333 0.00 0.00 42.46 3.06
7097 10128 4.264460 ACATGACTGTCACTCTTCCTTC 57.736 45.455 13.50 0.00 0.00 3.46
7098 10129 3.900601 ACATGACTGTCACTCTTCCTTCT 59.099 43.478 13.50 0.00 0.00 2.85
7101 10132 4.986783 TGACTGTCACTCTTCCTTCTCTA 58.013 43.478 6.36 0.00 0.00 2.43
7105 10136 4.590918 TGTCACTCTTCCTTCTCTATCGT 58.409 43.478 0.00 0.00 0.00 3.73
7106 10137 4.396478 TGTCACTCTTCCTTCTCTATCGTG 59.604 45.833 0.00 0.00 0.00 4.35
7108 10139 3.380004 CACTCTTCCTTCTCTATCGTGCT 59.620 47.826 0.00 0.00 0.00 4.40
7109 10140 4.020543 ACTCTTCCTTCTCTATCGTGCTT 58.979 43.478 0.00 0.00 0.00 3.91
7110 10141 5.066634 CACTCTTCCTTCTCTATCGTGCTTA 59.933 44.000 0.00 0.00 0.00 3.09
7111 10142 5.830991 ACTCTTCCTTCTCTATCGTGCTTAT 59.169 40.000 0.00 0.00 0.00 1.73
7112 10143 6.999272 ACTCTTCCTTCTCTATCGTGCTTATA 59.001 38.462 0.00 0.00 0.00 0.98
7131 10165 4.814224 ATATTTTACTCACCCTGCCCAT 57.186 40.909 0.00 0.00 0.00 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 58 2.504681 CTTGCGCGAACAATGCCC 60.505 61.111 12.10 0.00 0.00 5.36
83 84 1.851304 TAATGAAAGCTTGGCTGGGG 58.149 50.000 0.00 0.00 39.62 4.96
171 187 7.569599 AATAATATTTCCTACCGGTCCTCAT 57.430 36.000 12.40 0.33 0.00 2.90
191 207 9.865321 AACTGACGCTAACATCTTAACTAATAA 57.135 29.630 0.00 0.00 0.00 1.40
192 208 9.865321 AAACTGACGCTAACATCTTAACTAATA 57.135 29.630 0.00 0.00 0.00 0.98
193 209 8.773404 AAACTGACGCTAACATCTTAACTAAT 57.227 30.769 0.00 0.00 0.00 1.73
194 210 8.597662 AAAACTGACGCTAACATCTTAACTAA 57.402 30.769 0.00 0.00 0.00 2.24
195 211 9.350357 CTAAAACTGACGCTAACATCTTAACTA 57.650 33.333 0.00 0.00 0.00 2.24
196 212 8.086522 TCTAAAACTGACGCTAACATCTTAACT 58.913 33.333 0.00 0.00 0.00 2.24
197 213 8.160976 GTCTAAAACTGACGCTAACATCTTAAC 58.839 37.037 0.00 0.00 0.00 2.01
198 214 8.086522 AGTCTAAAACTGACGCTAACATCTTAA 58.913 33.333 0.00 0.00 39.24 1.85
199 215 7.600065 AGTCTAAAACTGACGCTAACATCTTA 58.400 34.615 0.00 0.00 39.24 2.10
200 216 6.456501 AGTCTAAAACTGACGCTAACATCTT 58.543 36.000 0.00 0.00 39.24 2.40
201 217 6.026947 AGTCTAAAACTGACGCTAACATCT 57.973 37.500 0.00 0.00 39.24 2.90
202 218 7.327761 TGTTAGTCTAAAACTGACGCTAACATC 59.672 37.037 9.32 0.00 45.16 3.06
203 219 7.149973 TGTTAGTCTAAAACTGACGCTAACAT 58.850 34.615 9.32 0.00 45.16 2.71
204 220 6.506147 TGTTAGTCTAAAACTGACGCTAACA 58.494 36.000 9.32 9.32 45.16 2.41
205 221 6.998258 TGTTAGTCTAAAACTGACGCTAAC 57.002 37.500 0.00 0.00 45.16 2.34
206 222 7.487189 GCTATGTTAGTCTAAAACTGACGCTAA 59.513 37.037 0.00 0.00 45.16 3.09
207 223 6.971184 GCTATGTTAGTCTAAAACTGACGCTA 59.029 38.462 0.00 0.00 45.16 4.26
208 224 5.805994 GCTATGTTAGTCTAAAACTGACGCT 59.194 40.000 0.00 0.00 45.16 5.07
209 225 5.575606 TGCTATGTTAGTCTAAAACTGACGC 59.424 40.000 0.00 0.00 45.16 5.19
210 226 6.807230 ACTGCTATGTTAGTCTAAAACTGACG 59.193 38.462 0.00 0.00 45.16 4.35
211 227 8.535690 AACTGCTATGTTAGTCTAAAACTGAC 57.464 34.615 0.00 0.00 43.12 3.51
212 228 9.856488 CTAACTGCTATGTTAGTCTAAAACTGA 57.144 33.333 13.07 0.00 42.43 3.41
213 229 9.088512 CCTAACTGCTATGTTAGTCTAAAACTG 57.911 37.037 17.10 0.00 44.58 3.16
214 230 9.032624 TCCTAACTGCTATGTTAGTCTAAAACT 57.967 33.333 17.10 0.00 44.58 2.66
215 231 9.819267 ATCCTAACTGCTATGTTAGTCTAAAAC 57.181 33.333 17.10 0.00 44.58 2.43
218 234 8.639761 GGAATCCTAACTGCTATGTTAGTCTAA 58.360 37.037 17.10 0.00 44.58 2.10
219 235 7.232941 GGGAATCCTAACTGCTATGTTAGTCTA 59.767 40.741 17.10 8.13 44.58 2.59
220 236 6.042208 GGGAATCCTAACTGCTATGTTAGTCT 59.958 42.308 17.10 7.05 44.58 3.24
221 237 6.042208 AGGGAATCCTAACTGCTATGTTAGTC 59.958 42.308 17.10 11.35 44.58 2.59
222 238 5.905913 AGGGAATCCTAACTGCTATGTTAGT 59.094 40.000 17.10 5.65 44.58 2.24
223 239 6.426646 AGGGAATCCTAACTGCTATGTTAG 57.573 41.667 0.00 13.85 45.24 2.34
236 252 7.690286 TAGGTAGTTAGCCTATAGGGAATCCTA 59.310 40.741 20.58 9.58 42.02 2.94
237 253 5.319162 AGGTAGTTAGCCTATAGGGAATCCT 59.681 44.000 20.58 10.56 39.77 3.24
238 254 5.591806 AGGTAGTTAGCCTATAGGGAATCC 58.408 45.833 20.58 3.10 37.23 3.01
239 255 7.180663 TGTAGGTAGTTAGCCTATAGGGAATC 58.819 42.308 20.58 3.48 40.33 2.52
240 256 7.112372 TGTAGGTAGTTAGCCTATAGGGAAT 57.888 40.000 20.58 0.00 40.33 3.01
241 257 6.103797 ACTGTAGGTAGTTAGCCTATAGGGAA 59.896 42.308 20.58 0.00 45.96 3.97
242 258 5.614402 ACTGTAGGTAGTTAGCCTATAGGGA 59.386 44.000 20.58 0.00 45.96 4.20
243 259 5.890049 ACTGTAGGTAGTTAGCCTATAGGG 58.110 45.833 20.58 2.51 45.96 3.53
253 269 5.106157 GGACAACGCTAACTGTAGGTAGTTA 60.106 44.000 5.90 0.00 41.01 2.24
254 270 4.321527 GGACAACGCTAACTGTAGGTAGTT 60.322 45.833 5.90 0.00 43.03 2.24
255 271 3.192212 GGACAACGCTAACTGTAGGTAGT 59.808 47.826 5.90 0.00 0.00 2.73
256 272 3.192001 TGGACAACGCTAACTGTAGGTAG 59.808 47.826 0.00 0.00 0.00 3.18
257 273 3.156293 TGGACAACGCTAACTGTAGGTA 58.844 45.455 0.00 0.00 0.00 3.08
258 274 1.965643 TGGACAACGCTAACTGTAGGT 59.034 47.619 0.00 0.00 0.00 3.08
259 275 2.736144 TGGACAACGCTAACTGTAGG 57.264 50.000 0.00 0.00 0.00 3.18
260 276 3.789756 CGTATGGACAACGCTAACTGTAG 59.210 47.826 0.00 0.00 33.04 2.74
261 277 3.761657 CGTATGGACAACGCTAACTGTA 58.238 45.455 0.00 0.00 33.04 2.74
262 278 2.602878 CGTATGGACAACGCTAACTGT 58.397 47.619 0.00 0.00 33.04 3.55
270 286 1.985334 TACACAGCGTATGGACAACG 58.015 50.000 0.00 0.00 43.12 4.10
282 298 1.090052 GTCCCTTCGCCATACACAGC 61.090 60.000 0.00 0.00 0.00 4.40
283 299 0.249120 TGTCCCTTCGCCATACACAG 59.751 55.000 0.00 0.00 0.00 3.66
284 300 0.908910 ATGTCCCTTCGCCATACACA 59.091 50.000 0.00 0.00 0.00 3.72
285 301 1.134521 TGATGTCCCTTCGCCATACAC 60.135 52.381 0.00 0.00 0.00 2.90
286 302 1.199615 TGATGTCCCTTCGCCATACA 58.800 50.000 0.00 0.00 0.00 2.29
287 303 2.146342 CATGATGTCCCTTCGCCATAC 58.854 52.381 0.00 0.00 0.00 2.39
288 304 1.543208 GCATGATGTCCCTTCGCCATA 60.543 52.381 0.00 0.00 0.00 2.74
289 305 0.820891 GCATGATGTCCCTTCGCCAT 60.821 55.000 0.00 0.00 0.00 4.40
290 306 1.451927 GCATGATGTCCCTTCGCCA 60.452 57.895 0.00 0.00 0.00 5.69
291 307 2.189499 GGCATGATGTCCCTTCGCC 61.189 63.158 0.00 0.00 0.00 5.54
292 308 1.153086 AGGCATGATGTCCCTTCGC 60.153 57.895 0.00 0.00 0.00 4.70
293 309 0.107508 ACAGGCATGATGTCCCTTCG 60.108 55.000 4.84 0.00 0.00 3.79
294 310 2.134789 AACAGGCATGATGTCCCTTC 57.865 50.000 4.84 0.00 0.00 3.46
295 311 2.610438 AAACAGGCATGATGTCCCTT 57.390 45.000 4.84 0.00 0.00 3.95
296 312 3.737559 TTAAACAGGCATGATGTCCCT 57.262 42.857 4.84 0.00 0.00 4.20
297 313 3.509575 TGTTTAAACAGGCATGATGTCCC 59.490 43.478 17.01 0.00 34.30 4.46
298 314 4.782019 TGTTTAAACAGGCATGATGTCC 57.218 40.909 17.01 0.00 34.30 4.02
310 326 5.911752 ACAATGATTGTGCCTGTTTAAACA 58.088 33.333 19.53 19.53 43.48 2.83
311 327 7.095816 GGTTACAATGATTGTGCCTGTTTAAAC 60.096 37.037 20.29 11.54 45.03 2.01
312 328 6.926272 GGTTACAATGATTGTGCCTGTTTAAA 59.074 34.615 20.29 0.97 45.03 1.52
313 329 6.451393 GGTTACAATGATTGTGCCTGTTTAA 58.549 36.000 20.29 1.68 45.03 1.52
314 330 5.335269 CGGTTACAATGATTGTGCCTGTTTA 60.335 40.000 20.29 0.00 45.03 2.01
315 331 4.558496 CGGTTACAATGATTGTGCCTGTTT 60.558 41.667 20.29 0.00 45.03 2.83
316 332 3.057596 CGGTTACAATGATTGTGCCTGTT 60.058 43.478 20.29 0.00 45.03 3.16
317 333 2.487762 CGGTTACAATGATTGTGCCTGT 59.512 45.455 20.29 0.00 45.03 4.00
318 334 2.746904 TCGGTTACAATGATTGTGCCTG 59.253 45.455 20.29 14.37 45.03 4.85
319 335 2.747446 GTCGGTTACAATGATTGTGCCT 59.253 45.455 20.29 0.00 45.03 4.75
320 336 2.475519 CGTCGGTTACAATGATTGTGCC 60.476 50.000 20.29 18.86 45.03 5.01
321 337 2.158841 ACGTCGGTTACAATGATTGTGC 59.841 45.455 20.29 12.47 45.03 4.57
322 338 4.148166 CAACGTCGGTTACAATGATTGTG 58.852 43.478 20.29 4.17 45.03 3.33
324 340 4.398549 ACAACGTCGGTTACAATGATTG 57.601 40.909 3.16 3.16 33.72 2.67
325 341 5.466058 TGTTACAACGTCGGTTACAATGATT 59.534 36.000 8.97 0.00 33.72 2.57
326 342 4.989797 TGTTACAACGTCGGTTACAATGAT 59.010 37.500 8.97 0.00 33.72 2.45
327 343 4.208873 GTGTTACAACGTCGGTTACAATGA 59.791 41.667 11.95 0.00 33.72 2.57
328 344 4.448005 GTGTTACAACGTCGGTTACAATG 58.552 43.478 11.95 0.00 33.72 2.82
329 345 3.182173 CGTGTTACAACGTCGGTTACAAT 59.818 43.478 11.95 0.00 38.74 2.71
330 346 2.533535 CGTGTTACAACGTCGGTTACAA 59.466 45.455 11.95 0.00 38.74 2.41
331 347 2.115595 CGTGTTACAACGTCGGTTACA 58.884 47.619 7.73 7.73 38.74 2.41
332 348 1.136911 GCGTGTTACAACGTCGGTTAC 60.137 52.381 0.00 0.00 45.32 2.50
333 349 1.127701 GCGTGTTACAACGTCGGTTA 58.872 50.000 0.00 0.00 45.32 2.85
334 350 1.489881 GGCGTGTTACAACGTCGGTT 61.490 55.000 0.00 0.00 45.32 4.44
335 351 1.950630 GGCGTGTTACAACGTCGGT 60.951 57.895 0.00 0.00 45.32 4.69
336 352 2.848310 GGCGTGTTACAACGTCGG 59.152 61.111 0.00 0.00 45.32 4.79
338 354 1.489881 AACCGGCGTGTTACAACGTC 61.490 55.000 6.01 5.78 45.32 4.34
339 355 1.489881 GAACCGGCGTGTTACAACGT 61.490 55.000 6.01 0.00 45.32 3.99
340 356 1.202320 GAACCGGCGTGTTACAACG 59.798 57.895 6.01 0.00 46.30 4.10
341 357 0.233848 CTGAACCGGCGTGTTACAAC 59.766 55.000 6.01 0.00 0.00 3.32
342 358 0.104487 TCTGAACCGGCGTGTTACAA 59.896 50.000 6.01 0.00 0.00 2.41
343 359 0.319083 ATCTGAACCGGCGTGTTACA 59.681 50.000 6.01 9.03 0.00 2.41
344 360 0.719465 CATCTGAACCGGCGTGTTAC 59.281 55.000 6.01 5.23 0.00 2.50
345 361 0.390603 CCATCTGAACCGGCGTGTTA 60.391 55.000 6.01 0.00 0.00 2.41
346 362 1.671054 CCATCTGAACCGGCGTGTT 60.671 57.895 12.43 12.43 0.00 3.32
347 363 1.537814 TACCATCTGAACCGGCGTGT 61.538 55.000 6.01 0.00 0.00 4.49
348 364 0.179084 ATACCATCTGAACCGGCGTG 60.179 55.000 6.01 0.00 0.00 5.34
349 365 1.405872 TATACCATCTGAACCGGCGT 58.594 50.000 6.01 0.00 0.00 5.68
350 366 2.743636 ATATACCATCTGAACCGGCG 57.256 50.000 0.00 0.00 0.00 6.46
351 367 4.504858 CCTTATATACCATCTGAACCGGC 58.495 47.826 0.00 0.00 0.00 6.13
352 368 4.223032 AGCCTTATATACCATCTGAACCGG 59.777 45.833 0.00 0.00 0.00 5.28
353 369 5.047306 TCAGCCTTATATACCATCTGAACCG 60.047 44.000 0.00 0.00 0.00 4.44
354 370 6.360370 TCAGCCTTATATACCATCTGAACC 57.640 41.667 0.00 0.00 0.00 3.62
355 371 7.659652 GTTCAGCCTTATATACCATCTGAAC 57.340 40.000 19.45 19.45 46.07 3.18
356 372 7.071196 ACTGTTCAGCCTTATATACCATCTGAA 59.929 37.037 9.83 9.83 36.93 3.02
357 373 6.554982 ACTGTTCAGCCTTATATACCATCTGA 59.445 38.462 0.00 0.00 0.00 3.27
358 374 6.763355 ACTGTTCAGCCTTATATACCATCTG 58.237 40.000 0.00 0.00 0.00 2.90
359 375 8.368668 GTTACTGTTCAGCCTTATATACCATCT 58.631 37.037 0.00 0.00 0.00 2.90
360 376 8.148351 TGTTACTGTTCAGCCTTATATACCATC 58.852 37.037 0.00 0.00 0.00 3.51
361 377 8.029782 TGTTACTGTTCAGCCTTATATACCAT 57.970 34.615 0.00 0.00 0.00 3.55
362 378 7.426606 TGTTACTGTTCAGCCTTATATACCA 57.573 36.000 0.00 0.00 0.00 3.25
363 379 8.148351 TGATGTTACTGTTCAGCCTTATATACC 58.852 37.037 0.00 0.00 0.00 2.73
364 380 9.542462 TTGATGTTACTGTTCAGCCTTATATAC 57.458 33.333 0.00 0.00 0.00 1.47
368 384 9.461312 TTTATTGATGTTACTGTTCAGCCTTAT 57.539 29.630 0.00 0.00 0.00 1.73
369 385 8.856153 TTTATTGATGTTACTGTTCAGCCTTA 57.144 30.769 0.00 0.00 0.00 2.69
370 386 7.759489 TTTATTGATGTTACTGTTCAGCCTT 57.241 32.000 0.00 0.00 0.00 4.35
371 387 7.448469 AGTTTTATTGATGTTACTGTTCAGCCT 59.552 33.333 0.00 0.00 0.00 4.58
372 388 7.593825 AGTTTTATTGATGTTACTGTTCAGCC 58.406 34.615 0.00 0.00 0.00 4.85
373 389 9.543018 GTAGTTTTATTGATGTTACTGTTCAGC 57.457 33.333 0.00 0.00 0.00 4.26
377 393 9.787435 TGGAGTAGTTTTATTGATGTTACTGTT 57.213 29.630 0.00 0.00 0.00 3.16
378 394 9.959721 ATGGAGTAGTTTTATTGATGTTACTGT 57.040 29.630 0.00 0.00 0.00 3.55
383 399 9.520515 AGTGAATGGAGTAGTTTTATTGATGTT 57.479 29.630 0.00 0.00 0.00 2.71
384 400 9.520515 AAGTGAATGGAGTAGTTTTATTGATGT 57.479 29.630 0.00 0.00 0.00 3.06
385 401 9.994432 GAAGTGAATGGAGTAGTTTTATTGATG 57.006 33.333 0.00 0.00 0.00 3.07
386 402 9.739276 TGAAGTGAATGGAGTAGTTTTATTGAT 57.261 29.630 0.00 0.00 0.00 2.57
387 403 9.567776 TTGAAGTGAATGGAGTAGTTTTATTGA 57.432 29.630 0.00 0.00 0.00 2.57
390 406 9.965902 AGATTGAAGTGAATGGAGTAGTTTTAT 57.034 29.630 0.00 0.00 0.00 1.40
391 407 9.436957 GAGATTGAAGTGAATGGAGTAGTTTTA 57.563 33.333 0.00 0.00 0.00 1.52
392 408 8.160106 AGAGATTGAAGTGAATGGAGTAGTTTT 58.840 33.333 0.00 0.00 0.00 2.43
393 409 7.684529 AGAGATTGAAGTGAATGGAGTAGTTT 58.315 34.615 0.00 0.00 0.00 2.66
394 410 7.251321 AGAGATTGAAGTGAATGGAGTAGTT 57.749 36.000 0.00 0.00 0.00 2.24
395 411 6.865834 AGAGATTGAAGTGAATGGAGTAGT 57.134 37.500 0.00 0.00 0.00 2.73
396 412 9.829507 AATAAGAGATTGAAGTGAATGGAGTAG 57.170 33.333 0.00 0.00 0.00 2.57
398 414 9.171877 GAAATAAGAGATTGAAGTGAATGGAGT 57.828 33.333 0.00 0.00 0.00 3.85
399 415 9.393512 AGAAATAAGAGATTGAAGTGAATGGAG 57.606 33.333 0.00 0.00 0.00 3.86
400 416 9.745018 AAGAAATAAGAGATTGAAGTGAATGGA 57.255 29.630 0.00 0.00 0.00 3.41
410 426 9.144747 CGTCTTTGAGAAGAAATAAGAGATTGA 57.855 33.333 0.00 0.00 43.21 2.57
411 427 8.930760 ACGTCTTTGAGAAGAAATAAGAGATTG 58.069 33.333 0.00 0.00 43.21 2.67
412 428 9.145865 GACGTCTTTGAGAAGAAATAAGAGATT 57.854 33.333 8.70 0.00 43.21 2.40
413 429 8.527810 AGACGTCTTTGAGAAGAAATAAGAGAT 58.472 33.333 13.58 0.00 43.21 2.75
414 430 7.887381 AGACGTCTTTGAGAAGAAATAAGAGA 58.113 34.615 13.58 0.00 43.21 3.10
415 431 7.274686 GGAGACGTCTTTGAGAAGAAATAAGAG 59.725 40.741 21.08 0.00 43.21 2.85
416 432 7.091443 GGAGACGTCTTTGAGAAGAAATAAGA 58.909 38.462 21.08 0.00 43.21 2.10
417 433 6.311690 GGGAGACGTCTTTGAGAAGAAATAAG 59.688 42.308 21.08 0.00 43.21 1.73
418 434 6.164176 GGGAGACGTCTTTGAGAAGAAATAA 58.836 40.000 21.08 0.00 43.21 1.40
419 435 5.621555 CGGGAGACGTCTTTGAGAAGAAATA 60.622 44.000 21.08 0.00 43.21 1.40
420 436 4.570930 GGGAGACGTCTTTGAGAAGAAAT 58.429 43.478 21.08 0.00 43.21 2.17
421 437 3.552273 CGGGAGACGTCTTTGAGAAGAAA 60.552 47.826 21.08 0.00 43.21 2.52
422 438 2.030185 CGGGAGACGTCTTTGAGAAGAA 60.030 50.000 21.08 0.00 43.21 2.52
423 439 1.540267 CGGGAGACGTCTTTGAGAAGA 59.460 52.381 21.08 0.00 39.54 2.87
424 440 1.983972 CGGGAGACGTCTTTGAGAAG 58.016 55.000 21.08 3.83 37.93 2.85
479 495 1.400846 GGATGACGCGAACTCTCTGTA 59.599 52.381 15.93 0.00 0.00 2.74
524 540 0.252330 TCACCACCACCTTATCCCGA 60.252 55.000 0.00 0.00 0.00 5.14
543 559 3.411351 GCCGCACGAACGTCACAT 61.411 61.111 0.00 0.00 0.00 3.21
561 577 1.080974 CGTACGTTCCGAGCCTTGT 60.081 57.895 7.22 0.00 0.00 3.16
569 585 1.730547 GGTCCACACGTACGTTCCG 60.731 63.158 20.23 10.58 0.00 4.30
570 586 1.730547 CGGTCCACACGTACGTTCC 60.731 63.158 20.23 14.30 0.00 3.62
572 588 2.355009 GCGGTCCACACGTACGTT 60.355 61.111 20.23 7.73 0.00 3.99
590 649 0.096976 CGACAAATGGATCACGCCAC 59.903 55.000 0.00 0.00 41.56 5.01
651 715 3.677148 GCACACATCTTGATCGAGAAGGA 60.677 47.826 16.73 0.00 0.00 3.36
653 717 2.280971 CGCACACATCTTGATCGAGAAG 59.719 50.000 16.73 14.56 0.00 2.85
654 718 2.262211 CGCACACATCTTGATCGAGAA 58.738 47.619 16.73 0.96 0.00 2.87
697 761 0.992431 ATGCTCCTCCATCCAAGCCT 60.992 55.000 0.00 0.00 33.79 4.58
705 769 7.783596 AGAAAGAAAATAATCATGCTCCTCCAT 59.216 33.333 0.00 0.00 0.00 3.41
718 782 7.357471 AGCCATGGTCCTAGAAAGAAAATAAT 58.643 34.615 14.67 0.00 0.00 1.28
750 814 5.914635 GGTACATGTCACACTGTGAAAAATG 59.085 40.000 15.86 17.46 44.49 2.32
757 832 2.432206 TCGGTACATGTCACACTGTG 57.568 50.000 0.00 6.19 34.45 3.66
800 875 5.546499 TCCTGGCTCTACCTTCTTCTTTTAA 59.454 40.000 0.00 0.00 40.22 1.52
812 887 4.668636 ACTGATATACTCCTGGCTCTACC 58.331 47.826 0.00 0.00 39.84 3.18
820 895 8.439993 AGCACGTATATACTGATATACTCCTG 57.560 38.462 11.05 6.69 44.44 3.86
831 906 4.119862 ACAAGGCAAGCACGTATATACTG 58.880 43.478 11.05 9.03 0.00 2.74
832 907 4.402056 ACAAGGCAAGCACGTATATACT 57.598 40.909 11.05 0.00 0.00 2.12
833 908 4.331717 ACAACAAGGCAAGCACGTATATAC 59.668 41.667 2.53 2.53 0.00 1.47
834 909 4.509616 ACAACAAGGCAAGCACGTATATA 58.490 39.130 0.00 0.00 0.00 0.86
835 910 3.343617 ACAACAAGGCAAGCACGTATAT 58.656 40.909 0.00 0.00 0.00 0.86
836 911 2.773487 ACAACAAGGCAAGCACGTATA 58.227 42.857 0.00 0.00 0.00 1.47
837 912 1.604604 ACAACAAGGCAAGCACGTAT 58.395 45.000 0.00 0.00 0.00 3.06
838 913 2.242047 TACAACAAGGCAAGCACGTA 57.758 45.000 0.00 0.00 0.00 3.57
839 914 1.604604 ATACAACAAGGCAAGCACGT 58.395 45.000 0.00 0.00 0.00 4.49
840 915 2.704725 AATACAACAAGGCAAGCACG 57.295 45.000 0.00 0.00 0.00 5.34
841 916 4.119136 ACAAAATACAACAAGGCAAGCAC 58.881 39.130 0.00 0.00 0.00 4.40
842 917 4.142071 TGACAAAATACAACAAGGCAAGCA 60.142 37.500 0.00 0.00 0.00 3.91
843 918 4.367450 TGACAAAATACAACAAGGCAAGC 58.633 39.130 0.00 0.00 0.00 4.01
899 2532 1.081840 GCTGCACGCAGTTTTCCTC 60.082 57.895 19.56 0.00 41.61 3.71
976 2640 1.445582 CGGTGCGGTACTTGTCTCC 60.446 63.158 0.00 0.00 0.00 3.71
1091 2786 3.827898 GGAGGGGTGAGACGCGAG 61.828 72.222 15.93 0.00 31.02 5.03
1099 2794 2.687200 CGGTGATGGGAGGGGTGA 60.687 66.667 0.00 0.00 0.00 4.02
1119 2819 3.331591 TGGATGGATGGATGGATTTCGAT 59.668 43.478 0.00 0.00 0.00 3.59
1165 2869 5.897377 TCCGGATGGATTTTTCTCTTTTC 57.103 39.130 0.00 0.00 40.17 2.29
1182 2886 4.673298 TTTGCTCGCGCTTCCGGA 62.673 61.111 5.56 0.00 36.97 5.14
1183 2887 4.152625 CTTTGCTCGCGCTTCCGG 62.153 66.667 5.56 0.00 36.97 5.14
1186 2890 4.467062 GGCCTTTGCTCGCGCTTC 62.467 66.667 5.56 0.00 37.74 3.86
1198 2902 2.875804 GCAAAGCTGCCTTGGCCTT 61.876 57.895 12.51 3.42 41.33 4.35
1202 2906 2.049802 CACGCAAAGCTGCCTTGG 60.050 61.111 12.51 5.71 46.56 3.61
1208 2912 4.748679 GCCTCGCACGCAAAGCTG 62.749 66.667 0.00 0.00 0.00 4.24
1211 2915 4.139420 CTCGCCTCGCACGCAAAG 62.139 66.667 0.00 0.00 0.00 2.77
1321 3031 0.388649 TCTCGCGGAAGTTCTTGAGC 60.389 55.000 6.13 3.38 0.00 4.26
1353 3063 2.743928 GCTTGAGGTGGGACTGCG 60.744 66.667 0.00 0.00 0.00 5.18
1401 3111 1.045350 TCTGCAATCGGAGGGAGAGG 61.045 60.000 0.00 0.00 0.00 3.69
1414 3143 4.843516 AGGTTTCCCCAAATTTATCTGCAA 59.156 37.500 0.00 0.00 34.66 4.08
1452 3183 2.223433 CGTACGCGAAACCCTAGAATCT 60.223 50.000 15.93 0.00 41.33 2.40
1454 3185 1.202336 CCGTACGCGAAACCCTAGAAT 60.202 52.381 15.93 0.00 41.33 2.40
1536 3301 2.740714 CCAGCGCTAACGAACAGCC 61.741 63.158 10.99 0.00 43.93 4.85
1579 3344 2.033448 AAATCGAGCGCCAACCCA 59.967 55.556 2.29 0.00 0.00 4.51
1582 3347 2.276680 GCGAAATCGAGCGCCAAC 60.277 61.111 16.28 0.00 46.93 3.77
1610 3395 4.038042 CCAACGAGATGAGACCTAATGCTA 59.962 45.833 0.00 0.00 0.00 3.49
1620 3405 3.830178 TCTAACCAACCAACGAGATGAGA 59.170 43.478 0.00 0.00 0.00 3.27
1621 3406 4.188247 TCTAACCAACCAACGAGATGAG 57.812 45.455 0.00 0.00 0.00 2.90
1622 3407 4.819105 ATCTAACCAACCAACGAGATGA 57.181 40.909 0.00 0.00 0.00 2.92
1623 3408 4.094887 CCAATCTAACCAACCAACGAGATG 59.905 45.833 0.00 0.00 0.00 2.90
1636 3421 1.285078 AGCAACTCCCCCAATCTAACC 59.715 52.381 0.00 0.00 0.00 2.85
1638 3423 2.026262 GTGAGCAACTCCCCCAATCTAA 60.026 50.000 0.00 0.00 0.00 2.10
1640 3425 0.329596 GTGAGCAACTCCCCCAATCT 59.670 55.000 0.00 0.00 0.00 2.40
1641 3426 0.681243 GGTGAGCAACTCCCCCAATC 60.681 60.000 0.00 0.00 0.00 2.67
1642 3427 1.142688 AGGTGAGCAACTCCCCCAAT 61.143 55.000 0.00 0.00 28.03 3.16
1643 3428 1.774217 AGGTGAGCAACTCCCCCAA 60.774 57.895 0.00 0.00 28.03 4.12
1647 3434 1.673665 CAGCAGGTGAGCAACTCCC 60.674 63.158 0.00 0.00 36.85 4.30
1658 3445 2.632377 CGATTAATCACCACAGCAGGT 58.368 47.619 15.57 0.00 44.48 4.00
1664 3451 1.656594 CGAACGCGATTAATCACCACA 59.343 47.619 15.93 0.00 40.82 4.17
1705 3492 2.383527 CCGAACAGAGCGGCAGAAC 61.384 63.158 1.45 0.00 42.55 3.01
1722 3509 1.399440 GTAGCGTTCCCCGAAATTTCC 59.601 52.381 12.54 0.00 39.56 3.13
1737 3524 1.105167 TACCCCGTCATCAGGTAGCG 61.105 60.000 0.00 0.00 35.02 4.26
1811 3598 2.710377 ACTCTGCACAAACAGTCACAA 58.290 42.857 0.00 0.00 38.84 3.33
1880 3689 8.997323 AGAGAAGTGCTCATAATTATGCATAAC 58.003 33.333 21.10 13.77 46.45 1.89
1922 3735 2.695666 ACCGAGAGAGAGAGAGAGAGAG 59.304 54.545 0.00 0.00 0.00 3.20
1924 3737 3.005897 CCTACCGAGAGAGAGAGAGAGAG 59.994 56.522 0.00 0.00 0.00 3.20
1926 3739 2.548067 GCCTACCGAGAGAGAGAGAGAG 60.548 59.091 0.00 0.00 0.00 3.20
1927 3740 1.414919 GCCTACCGAGAGAGAGAGAGA 59.585 57.143 0.00 0.00 0.00 3.10
1928 3741 1.140052 TGCCTACCGAGAGAGAGAGAG 59.860 57.143 0.00 0.00 0.00 3.20
1929 3742 1.205055 TGCCTACCGAGAGAGAGAGA 58.795 55.000 0.00 0.00 0.00 3.10
1930 3743 1.879380 CATGCCTACCGAGAGAGAGAG 59.121 57.143 0.00 0.00 0.00 3.20
1931 3744 1.477740 CCATGCCTACCGAGAGAGAGA 60.478 57.143 0.00 0.00 0.00 3.10
1938 3751 2.109799 CCTGCCATGCCTACCGAG 59.890 66.667 0.00 0.00 0.00 4.63
1939 3752 2.882403 TACCCTGCCATGCCTACCGA 62.882 60.000 0.00 0.00 0.00 4.69
1940 3753 1.768684 ATACCCTGCCATGCCTACCG 61.769 60.000 0.00 0.00 0.00 4.02
1942 3755 0.890996 GCATACCCTGCCATGCCTAC 60.891 60.000 0.00 0.00 45.66 3.18
1963 3776 4.518970 CCATTATGATTCTACGTTTGGGGG 59.481 45.833 0.00 0.00 0.00 5.40
1964 3777 5.373222 TCCATTATGATTCTACGTTTGGGG 58.627 41.667 0.00 0.00 0.00 4.96
1965 3778 6.055588 ACTCCATTATGATTCTACGTTTGGG 58.944 40.000 0.00 0.00 0.00 4.12
1966 3779 8.657074 TTACTCCATTATGATTCTACGTTTGG 57.343 34.615 0.00 0.00 0.00 3.28
2014 3827 9.908152 CTGGTAGTCATAATTGATAACGACATA 57.092 33.333 0.00 0.00 33.56 2.29
2015 3828 8.421784 ACTGGTAGTCATAATTGATAACGACAT 58.578 33.333 0.00 0.00 33.56 3.06
2016 3829 7.778083 ACTGGTAGTCATAATTGATAACGACA 58.222 34.615 0.00 0.00 33.56 4.35
2018 3831 9.740239 GTAACTGGTAGTCATAATTGATAACGA 57.260 33.333 0.00 0.00 33.56 3.85
2019 3832 9.745880 AGTAACTGGTAGTCATAATTGATAACG 57.254 33.333 0.00 0.00 33.56 3.18
2023 3836 7.569111 AGGGAGTAACTGGTAGTCATAATTGAT 59.431 37.037 9.62 0.00 34.24 2.57
2024 3837 6.901300 AGGGAGTAACTGGTAGTCATAATTGA 59.099 38.462 9.62 0.00 34.24 2.57
2046 3913 3.444029 ACAAGAATTTTGGGATGGAGGG 58.556 45.455 5.68 0.00 0.00 4.30
2047 3914 4.347607 AGACAAGAATTTTGGGATGGAGG 58.652 43.478 5.68 0.00 0.00 4.30
2048 3915 5.990120 AAGACAAGAATTTTGGGATGGAG 57.010 39.130 5.68 0.00 0.00 3.86
2049 3916 6.789268 TCTAAGACAAGAATTTTGGGATGGA 58.211 36.000 5.68 0.00 0.00 3.41
2051 3918 9.362539 CAAATCTAAGACAAGAATTTTGGGATG 57.637 33.333 5.68 0.00 28.49 3.51
2052 3919 9.093458 ACAAATCTAAGACAAGAATTTTGGGAT 57.907 29.630 0.00 0.00 33.04 3.85
2053 3920 8.477419 ACAAATCTAAGACAAGAATTTTGGGA 57.523 30.769 0.00 0.00 33.04 4.37
2054 3921 8.579863 AGACAAATCTAAGACAAGAATTTTGGG 58.420 33.333 0.00 0.00 33.04 4.12
2083 3950 7.225538 CGAGGAAAAAGCAAGATACATCTGTAT 59.774 37.037 2.53 2.53 43.38 2.29
2084 3951 6.535150 CGAGGAAAAAGCAAGATACATCTGTA 59.465 38.462 0.00 0.00 37.19 2.74
2085 3952 5.352569 CGAGGAAAAAGCAAGATACATCTGT 59.647 40.000 0.00 0.00 37.19 3.41
2086 3953 5.352569 ACGAGGAAAAAGCAAGATACATCTG 59.647 40.000 0.00 0.00 37.19 2.90
2087 3954 5.491982 ACGAGGAAAAAGCAAGATACATCT 58.508 37.500 0.00 0.00 39.22 2.90
2088 3955 5.803020 ACGAGGAAAAAGCAAGATACATC 57.197 39.130 0.00 0.00 0.00 3.06
2089 3956 6.431234 AGAAACGAGGAAAAAGCAAGATACAT 59.569 34.615 0.00 0.00 0.00 2.29
2090 3957 5.763204 AGAAACGAGGAAAAAGCAAGATACA 59.237 36.000 0.00 0.00 0.00 2.29
2091 3958 6.242508 AGAAACGAGGAAAAAGCAAGATAC 57.757 37.500 0.00 0.00 0.00 2.24
2092 3959 6.485313 TGAAGAAACGAGGAAAAAGCAAGATA 59.515 34.615 0.00 0.00 0.00 1.98
2093 3960 5.299279 TGAAGAAACGAGGAAAAAGCAAGAT 59.701 36.000 0.00 0.00 0.00 2.40
2094 3961 4.638421 TGAAGAAACGAGGAAAAAGCAAGA 59.362 37.500 0.00 0.00 0.00 3.02
2120 3987 2.223548 TGCATGACAAGCACAACTGTTC 60.224 45.455 0.24 0.00 37.02 3.18
2130 3997 4.053295 ACAGAAATTGTTGCATGACAAGC 58.947 39.130 9.64 0.00 42.28 4.01
2150 4023 4.497300 GCTTGGTAGGAACGTGTAATACA 58.503 43.478 0.00 0.00 0.00 2.29
2153 4026 2.028748 ACGCTTGGTAGGAACGTGTAAT 60.029 45.455 0.00 0.00 35.33 1.89
2164 4037 1.272490 TCTGACAAGGACGCTTGGTAG 59.728 52.381 7.55 5.40 38.55 3.18
2194 4067 3.129287 AGAATTTGCCAAGCCAACGATAG 59.871 43.478 0.00 0.00 46.19 2.08
2209 4082 6.449698 ACAGGATTAACAGCACAAGAATTTG 58.550 36.000 0.00 0.00 40.24 2.32
2253 4180 6.182627 TGTAGCATCAGTGGAATTTTCTGAT 58.817 36.000 12.15 12.15 45.84 2.90
2299 4226 0.174162 CAGCCAAAACTATGCCCAGC 59.826 55.000 0.00 0.00 0.00 4.85
2367 4294 2.483877 TGTAAGCATTCAGTTTCTGCCG 59.516 45.455 0.00 0.00 36.56 5.69
2369 4296 5.051891 ACATGTAAGCATTCAGTTTCTGC 57.948 39.130 0.00 0.00 36.15 4.26
2393 4320 8.771766 GGAAAACTTAACAACCACTCTAACTAG 58.228 37.037 0.00 0.00 0.00 2.57
2449 4376 5.774690 AGGAAATAGCAGGAAATTGTCAACA 59.225 36.000 0.00 0.00 0.00 3.33
2501 4459 1.337110 GCACAAAAATCTGCGGTCGC 61.337 55.000 8.54 8.54 42.35 5.19
2502 4460 2.712077 GCACAAAAATCTGCGGTCG 58.288 52.632 0.00 0.00 0.00 4.79
2507 4465 2.319472 GGAACTCGCACAAAAATCTGC 58.681 47.619 0.00 0.00 0.00 4.26
2508 4466 2.554032 AGGGAACTCGCACAAAAATCTG 59.446 45.455 0.00 0.00 32.90 2.90
2509 4467 2.554032 CAGGGAACTCGCACAAAAATCT 59.446 45.455 0.00 0.00 40.21 2.40
2510 4468 2.293399 ACAGGGAACTCGCACAAAAATC 59.707 45.455 0.00 0.00 40.21 2.17
2511 4469 2.034558 CACAGGGAACTCGCACAAAAAT 59.965 45.455 0.00 0.00 40.21 1.82
2512 4470 1.403679 CACAGGGAACTCGCACAAAAA 59.596 47.619 0.00 0.00 40.21 1.94
2531 4501 0.608035 GCACCGAACAAATCCCCTCA 60.608 55.000 0.00 0.00 0.00 3.86
2578 4548 2.887568 CCAGCCAGCGCTAACGAG 60.888 66.667 10.99 0.00 46.25 4.18
2589 4559 2.281484 GAACGAACCAGCCAGCCA 60.281 61.111 0.00 0.00 0.00 4.75
2590 4560 3.056328 GGAACGAACCAGCCAGCC 61.056 66.667 0.00 0.00 0.00 4.85
2591 4561 3.056328 GGGAACGAACCAGCCAGC 61.056 66.667 0.00 0.00 0.00 4.85
2592 4562 2.359975 GGGGAACGAACCAGCCAG 60.360 66.667 0.00 0.00 0.00 4.85
2613 4583 1.613437 CGAGCTCCAAACCACCAAATT 59.387 47.619 8.47 0.00 0.00 1.82
2633 4603 2.279517 ACAATCCGGCGCGAGATC 60.280 61.111 12.10 0.00 0.00 2.75
2638 4608 2.202298 GAAACACAATCCGGCGCG 60.202 61.111 0.00 0.00 0.00 6.86
2663 4633 7.064728 GGAGATCAACCGTAATGCTAATAATCC 59.935 40.741 0.00 0.00 0.00 3.01
2689 4659 2.554032 CCAAAGGCTAATAATCCAGCGG 59.446 50.000 0.00 0.00 38.73 5.52
2690 4660 2.554032 CCCAAAGGCTAATAATCCAGCG 59.446 50.000 0.00 0.00 38.73 5.18
2691 4661 3.823304 CTCCCAAAGGCTAATAATCCAGC 59.177 47.826 0.00 0.00 37.05 4.85
2692 4662 5.053978 ACTCCCAAAGGCTAATAATCCAG 57.946 43.478 0.00 0.00 0.00 3.86
2693 4663 5.200483 CAACTCCCAAAGGCTAATAATCCA 58.800 41.667 0.00 0.00 0.00 3.41
2694 4664 4.038042 GCAACTCCCAAAGGCTAATAATCC 59.962 45.833 0.00 0.00 0.00 3.01
2695 4665 4.889995 AGCAACTCCCAAAGGCTAATAATC 59.110 41.667 0.00 0.00 32.09 1.75
2696 4666 4.646492 CAGCAACTCCCAAAGGCTAATAAT 59.354 41.667 0.00 0.00 32.71 1.28
2697 4667 4.016444 CAGCAACTCCCAAAGGCTAATAA 58.984 43.478 0.00 0.00 32.71 1.40
2699 4669 2.041620 TCAGCAACTCCCAAAGGCTAAT 59.958 45.455 0.00 0.00 32.71 1.73
2700 4670 1.423541 TCAGCAACTCCCAAAGGCTAA 59.576 47.619 0.00 0.00 32.71 3.09
2701 4671 1.064003 TCAGCAACTCCCAAAGGCTA 58.936 50.000 0.00 0.00 32.71 3.93
2702 4672 0.538287 GTCAGCAACTCCCAAAGGCT 60.538 55.000 0.00 0.00 34.64 4.58
2756 4735 1.880819 GCAGAATTGGCACCTGGTGG 61.881 60.000 27.02 9.71 39.83 4.61
2800 4782 7.443272 CAGTGCATTATGATTCTACATTCCAGA 59.557 37.037 0.00 0.00 0.00 3.86
2802 4784 6.487668 CCAGTGCATTATGATTCTACATTCCA 59.512 38.462 0.00 0.00 0.00 3.53
2803 4785 6.712095 TCCAGTGCATTATGATTCTACATTCC 59.288 38.462 0.00 0.00 0.00 3.01
2804 4786 7.734924 TCCAGTGCATTATGATTCTACATTC 57.265 36.000 0.00 0.00 0.00 2.67
2852 4875 7.388460 AGGAAATCAAAGAGAACTGCTAATG 57.612 36.000 0.00 0.00 0.00 1.90
2885 4909 2.864343 CCAATCGTAAATCGTGAGGGAC 59.136 50.000 0.00 0.00 40.80 4.46
2886 4910 2.740580 GCCAATCGTAAATCGTGAGGGA 60.741 50.000 0.00 0.00 40.80 4.20
2896 4920 5.064558 TCAGGTTTACTTGCCAATCGTAAA 58.935 37.500 0.00 0.00 32.49 2.01
2902 4926 6.070881 TGCATATTTCAGGTTTACTTGCCAAT 60.071 34.615 0.00 0.00 0.00 3.16
2918 4942 3.185188 ACGTGATCAGCGATGCATATTTC 59.815 43.478 19.74 0.00 0.00 2.17
2949 4973 2.838202 AGAGCGTGGGGAATTTTCTCTA 59.162 45.455 0.00 0.00 0.00 2.43
2959 4983 0.324738 AATCAGAGAGAGCGTGGGGA 60.325 55.000 0.00 0.00 0.00 4.81
2961 4985 1.066573 ACAAATCAGAGAGAGCGTGGG 60.067 52.381 0.00 0.00 0.00 4.61
2962 4986 2.376808 ACAAATCAGAGAGAGCGTGG 57.623 50.000 0.00 0.00 0.00 4.94
2964 4988 4.021544 AGAGAAACAAATCAGAGAGAGCGT 60.022 41.667 0.00 0.00 0.00 5.07
3023 5084 3.737559 AAAGGTATCCATGCTGGTTGA 57.262 42.857 2.68 0.00 39.03 3.18
3112 5173 5.424895 AGATGTTGTCTAGGAGATCTGCTTT 59.575 40.000 22.72 1.24 34.69 3.51
3145 5206 7.616313 TCTTTTCTAAAGGTTTTTCTTTGCCA 58.384 30.769 0.00 0.00 37.51 4.92
3152 5213 9.634163 TCTTGTGTTCTTTTCTAAAGGTTTTTC 57.366 29.630 0.00 0.00 0.00 2.29
3157 5218 6.183360 GGCTTCTTGTGTTCTTTTCTAAAGGT 60.183 38.462 0.00 0.00 0.00 3.50
3158 5219 6.209361 GGCTTCTTGTGTTCTTTTCTAAAGG 58.791 40.000 0.00 0.00 0.00 3.11
3160 5221 5.587043 TCGGCTTCTTGTGTTCTTTTCTAAA 59.413 36.000 0.00 0.00 0.00 1.85
3164 5225 3.064820 TGTCGGCTTCTTGTGTTCTTTTC 59.935 43.478 0.00 0.00 0.00 2.29
3165 5226 3.013921 TGTCGGCTTCTTGTGTTCTTTT 58.986 40.909 0.00 0.00 0.00 2.27
3169 5230 1.264288 CCTTGTCGGCTTCTTGTGTTC 59.736 52.381 0.00 0.00 0.00 3.18
3248 5330 2.354821 ACAGTTGACGGCAAAGAGAAAC 59.645 45.455 4.55 0.00 35.42 2.78
3252 5334 1.939934 TCAACAGTTGACGGCAAAGAG 59.060 47.619 4.55 0.28 35.42 2.85
3264 5347 3.187227 GCAGATCGACAACATCAACAGTT 59.813 43.478 0.00 0.00 0.00 3.16
3270 5353 2.262211 CGAAGCAGATCGACAACATCA 58.738 47.619 0.00 0.00 45.48 3.07
3298 5391 2.276540 CGACGACGACTGAGCATAAAAG 59.723 50.000 0.00 0.00 42.66 2.27
3304 5397 2.861006 CTCGACGACGACTGAGCA 59.139 61.111 5.75 0.00 43.81 4.26
3331 5424 1.813862 CGGCAAAGAAGAGGTCCACAA 60.814 52.381 0.00 0.00 0.00 3.33
3377 5470 2.629656 CCCTCCTTTGCAGCCGTTG 61.630 63.158 0.00 0.00 0.00 4.10
3397 5490 0.468214 CTCTCGATGGACTAGGGCCA 60.468 60.000 6.18 8.79 40.24 5.36
3402 5495 6.333416 TGATTTGTTTCTCTCGATGGACTAG 58.667 40.000 0.00 0.00 0.00 2.57
3404 5497 5.152623 TGATTTGTTTCTCTCGATGGACT 57.847 39.130 0.00 0.00 0.00 3.85
3409 5502 7.672983 TTAAAGCTGATTTGTTTCTCTCGAT 57.327 32.000 0.38 0.00 32.01 3.59
3418 5511 5.933790 TCGCGTATTTAAAGCTGATTTGTT 58.066 33.333 5.77 0.00 32.01 2.83
3435 5528 5.580661 TGCTTAATTGTATGTACTCGCGTA 58.419 37.500 5.77 0.00 0.00 4.42
3438 5531 5.140177 GCATGCTTAATTGTATGTACTCGC 58.860 41.667 11.37 0.00 33.55 5.03
3475 5568 8.845227 TCACTCTATGCTGTGATTTTTGTTTTA 58.155 29.630 0.00 0.00 38.15 1.52
3491 5584 6.171213 TCATCATCAATGGATCACTCTATGC 58.829 40.000 0.00 0.00 35.94 3.14
3498 5591 6.735145 GCCTCTTTTCATCATCAATGGATCAC 60.735 42.308 0.00 0.00 35.94 3.06
3584 5677 1.338337 CCATATCCGACACGCTCTCTT 59.662 52.381 0.00 0.00 0.00 2.85
3595 5692 0.969149 CTAGCAGTGCCCATATCCGA 59.031 55.000 12.58 0.00 0.00 4.55
3597 5694 0.326264 CCCTAGCAGTGCCCATATCC 59.674 60.000 12.58 0.00 0.00 2.59
3621 5719 6.267496 TCACATCAACGATTGAGAGAAGTA 57.733 37.500 0.00 0.00 43.98 2.24
3669 5795 3.224269 GAGGGAAGTACTAGCTACCCAG 58.776 54.545 15.29 0.00 39.73 4.45
3670 5796 2.584031 TGAGGGAAGTACTAGCTACCCA 59.416 50.000 15.29 4.11 39.73 4.51
3671 5797 3.309600 TGAGGGAAGTACTAGCTACCC 57.690 52.381 6.73 6.73 37.79 3.69
3672 5798 4.894114 TGATTGAGGGAAGTACTAGCTACC 59.106 45.833 0.00 0.00 0.00 3.18
3728 5854 9.109393 AGTTTCCTAAAATTTTGGAAGCTTTTC 57.891 29.630 26.70 17.13 44.91 2.29
3778 5904 9.435688 CCCATAATCAATCTGATAACAATCGTA 57.564 33.333 0.00 0.00 35.76 3.43
3779 5905 7.939039 ACCCATAATCAATCTGATAACAATCGT 59.061 33.333 0.00 0.00 35.76 3.73
3804 5930 5.698545 AGCAGAATTGAGTCACTTCAACTAC 59.301 40.000 21.28 8.62 39.68 2.73
3934 6060 1.364721 CAATGGTTCCGATACACGCA 58.635 50.000 0.00 0.00 41.07 5.24
3952 6078 0.321919 GCACAGAGAACATCCAGGCA 60.322 55.000 0.00 0.00 0.00 4.75
3994 6120 1.280133 CATGGTCAGGAGAAGAAGGCA 59.720 52.381 0.00 0.00 0.00 4.75
4012 6138 6.551736 GTGCGGTAATCAAACAAGTTATCAT 58.448 36.000 0.00 0.00 0.00 2.45
4027 6153 2.994186 ATTTCTACCCGTGCGGTAAT 57.006 45.000 9.90 0.00 46.85 1.89
4029 6155 1.549620 TGAATTTCTACCCGTGCGGTA 59.450 47.619 9.90 0.00 45.97 4.02
4516 6753 0.618458 GACTAACAGTGGCCCATCCA 59.382 55.000 0.00 0.00 44.18 3.41
4695 6960 5.133941 TGCTTGTCCAAGTAACAACCAATA 58.866 37.500 8.69 0.00 40.45 1.90
4780 7209 6.664816 ACATGAATAACAGGAATGTGGAACAT 59.335 34.615 0.00 0.00 46.18 2.71
4785 7214 5.653507 CCAACATGAATAACAGGAATGTGG 58.346 41.667 0.00 0.00 32.04 4.17
4791 7220 4.009675 GTCAGCCAACATGAATAACAGGA 58.990 43.478 0.00 0.00 34.19 3.86
4837 7267 0.530744 TGTCACGAGGATGCTGGTAC 59.469 55.000 0.68 2.46 0.00 3.34
4883 7313 4.704833 GCGCCAGAGAAGCACCCA 62.705 66.667 0.00 0.00 0.00 4.51
5037 7685 0.677288 CGGGTTCCTCACAGTGTGTA 59.323 55.000 22.29 8.90 34.79 2.90
5056 7708 1.398390 GAATGATCTCCGTTGTGTGGC 59.602 52.381 0.00 0.00 0.00 5.01
5082 7734 5.879237 TCATGCTCATTCGGTCAAAAATAC 58.121 37.500 0.00 0.00 0.00 1.89
5156 7808 2.691526 GTCGTACACCATGTATCCCAGA 59.308 50.000 0.00 0.00 35.05 3.86
5273 8201 4.886496 TCTCACCATGATGATGAGGATC 57.114 45.455 16.46 0.00 38.57 3.36
5332 8266 5.124776 CGAATAGAATTTTGGCAACCAGGTA 59.875 40.000 0.00 0.00 33.81 3.08
5333 8267 4.082245 CGAATAGAATTTTGGCAACCAGGT 60.082 41.667 0.00 0.00 33.81 4.00
5334 8268 4.082245 ACGAATAGAATTTTGGCAACCAGG 60.082 41.667 0.00 0.00 33.81 4.45
5351 8285 6.493458 TGGACCAGATCATATCAGAACGAATA 59.507 38.462 0.00 0.00 0.00 1.75
5359 8293 5.861727 TCACAATGGACCAGATCATATCAG 58.138 41.667 0.00 0.00 0.00 2.90
5401 8335 0.455633 CGTTCTTGAGCTGCAATGGC 60.456 55.000 1.02 0.00 35.59 4.40
5512 8449 0.968901 TGGAGGTGGTACCAGTAGCG 60.969 60.000 16.93 0.00 41.95 4.26
5528 8465 4.669700 TCCTACAAGTACTTAGCAGTGGA 58.330 43.478 8.04 8.78 34.06 4.02
5600 8547 2.158957 ACAAGGTTCACACGACACAGAT 60.159 45.455 0.00 0.00 0.00 2.90
5601 8548 1.206132 ACAAGGTTCACACGACACAGA 59.794 47.619 0.00 0.00 0.00 3.41
5602 8549 1.327460 CACAAGGTTCACACGACACAG 59.673 52.381 0.00 0.00 0.00 3.66
5603 8550 1.338294 ACACAAGGTTCACACGACACA 60.338 47.619 0.00 0.00 0.00 3.72
5604 8551 1.062002 CACACAAGGTTCACACGACAC 59.938 52.381 0.00 0.00 0.00 3.67
5605 8552 1.066787 TCACACAAGGTTCACACGACA 60.067 47.619 0.00 0.00 0.00 4.35
5606 8553 1.593006 CTCACACAAGGTTCACACGAC 59.407 52.381 0.00 0.00 0.00 4.34
5681 8631 2.983402 TCGAGACAGTAACAGGAACG 57.017 50.000 0.00 0.00 0.00 3.95
5752 8703 0.591170 AAACCAACGAGCCACAATCG 59.409 50.000 0.00 0.00 45.54 3.34
5754 8705 3.972403 GTTAAAACCAACGAGCCACAAT 58.028 40.909 0.00 0.00 0.00 2.71
5766 8731 8.340249 ATGAGACACATCACAAGGTTAAAACCA 61.340 37.037 14.12 0.00 42.60 3.67
5829 8795 1.006922 GCCTTGCTCAACAACCTGC 60.007 57.895 0.00 0.00 33.68 4.85
5844 8810 0.107508 CATCACAATCGGACAGGCCT 60.108 55.000 0.00 0.00 0.00 5.19
5865 8831 2.036475 GACAAGAGAAGAGCACAGGTGA 59.964 50.000 3.10 0.00 0.00 4.02
5867 8833 1.000283 CGACAAGAGAAGAGCACAGGT 60.000 52.381 0.00 0.00 0.00 4.00
5882 8848 3.199677 CAACTACCTGGAAACACGACAA 58.800 45.455 0.00 0.00 35.60 3.18
5890 8856 1.001633 GTCGAGCCAACTACCTGGAAA 59.998 52.381 0.00 0.00 38.96 3.13
5895 8861 1.889530 GCCAGTCGAGCCAACTACCT 61.890 60.000 0.00 0.00 0.00 3.08
5970 8936 5.451354 TGGGGAAAAACTAGTTTTACAGCT 58.549 37.500 28.97 16.12 41.29 4.24
5975 8941 5.067544 CCACGTTGGGGAAAAACTAGTTTTA 59.932 40.000 28.97 13.85 36.47 1.52
5976 8942 4.142116 CCACGTTGGGGAAAAACTAGTTTT 60.142 41.667 24.66 24.66 37.88 2.43
5977 8943 3.382227 CCACGTTGGGGAAAAACTAGTTT 59.618 43.478 15.22 15.22 32.67 2.66
5978 8944 2.953648 CCACGTTGGGGAAAAACTAGTT 59.046 45.455 1.12 1.12 32.67 2.24
5980 8946 2.578786 ACCACGTTGGGGAAAAACTAG 58.421 47.619 8.57 0.00 43.37 2.57
5981 8947 2.688958 CAACCACGTTGGGGAAAAACTA 59.311 45.455 8.57 0.00 43.37 2.24
5983 8949 1.929230 CAACCACGTTGGGGAAAAAC 58.071 50.000 8.57 0.00 43.37 2.43
5985 8951 1.677637 GGCAACCACGTTGGGGAAAA 61.678 55.000 6.64 0.00 43.37 2.29
5986 8952 2.128507 GGCAACCACGTTGGGGAAA 61.129 57.895 6.64 0.00 43.37 3.13
5987 8953 2.519780 GGCAACCACGTTGGGGAA 60.520 61.111 6.64 0.00 43.37 3.97
6004 8970 2.736682 CCTAAAACTGGCGGACGCG 61.737 63.158 3.53 3.53 43.06 6.01
6013 8979 1.679153 ACCAAACACGCCCTAAAACTG 59.321 47.619 0.00 0.00 0.00 3.16
6014 8980 2.061509 ACCAAACACGCCCTAAAACT 57.938 45.000 0.00 0.00 0.00 2.66
6015 8981 2.465855 CAACCAAACACGCCCTAAAAC 58.534 47.619 0.00 0.00 0.00 2.43
6016 8982 1.202428 GCAACCAAACACGCCCTAAAA 60.202 47.619 0.00 0.00 0.00 1.52
6020 8986 1.398958 ATTGCAACCAAACACGCCCT 61.399 50.000 0.00 0.00 34.05 5.19
6021 8987 0.315568 TATTGCAACCAAACACGCCC 59.684 50.000 0.00 0.00 34.05 6.13
6022 8988 1.000717 ACTATTGCAACCAAACACGCC 60.001 47.619 0.00 0.00 34.05 5.68
6023 8989 2.050691 CACTATTGCAACCAAACACGC 58.949 47.619 0.00 0.00 34.05 5.34
6024 8990 3.617540 TCACTATTGCAACCAAACACG 57.382 42.857 0.00 0.00 34.05 4.49
6025 8991 4.677584 TGTTCACTATTGCAACCAAACAC 58.322 39.130 0.00 0.00 34.05 3.32
6026 8992 4.991153 TGTTCACTATTGCAACCAAACA 57.009 36.364 0.00 5.98 34.05 2.83
6027 8993 6.843069 AATTGTTCACTATTGCAACCAAAC 57.157 33.333 0.00 3.30 34.05 2.93
6028 8994 6.820656 ACAAATTGTTCACTATTGCAACCAAA 59.179 30.769 0.00 0.00 34.05 3.28
6029 8995 6.344500 ACAAATTGTTCACTATTGCAACCAA 58.656 32.000 0.00 0.00 35.01 3.67
6030 8996 5.911752 ACAAATTGTTCACTATTGCAACCA 58.088 33.333 0.00 0.00 0.00 3.67
6031 8997 6.843069 AACAAATTGTTCACTATTGCAACC 57.157 33.333 5.41 0.00 35.27 3.77
6032 8998 7.056800 CGAAACAAATTGTTCACTATTGCAAC 58.943 34.615 12.11 0.00 40.14 4.17
6033 8999 6.754209 ACGAAACAAATTGTTCACTATTGCAA 59.246 30.769 12.11 0.00 40.14 4.08
6034 9000 6.269315 ACGAAACAAATTGTTCACTATTGCA 58.731 32.000 12.11 0.00 40.14 4.08
6035 9001 6.747659 ACGAAACAAATTGTTCACTATTGC 57.252 33.333 12.11 0.00 40.14 3.56
6036 9002 8.114359 ACAACGAAACAAATTGTTCACTATTG 57.886 30.769 12.11 15.57 40.14 1.90
6037 9003 8.188139 AGACAACGAAACAAATTGTTCACTATT 58.812 29.630 12.11 0.00 40.14 1.73
6038 9004 7.643764 CAGACAACGAAACAAATTGTTCACTAT 59.356 33.333 12.11 0.00 40.14 2.12
6039 9005 6.964370 CAGACAACGAAACAAATTGTTCACTA 59.036 34.615 12.11 0.00 40.14 2.74
6040 9006 5.799936 CAGACAACGAAACAAATTGTTCACT 59.200 36.000 12.11 0.00 40.14 3.41
6041 9007 5.571357 ACAGACAACGAAACAAATTGTTCAC 59.429 36.000 12.11 8.54 40.14 3.18
6042 9008 5.704888 ACAGACAACGAAACAAATTGTTCA 58.295 33.333 12.11 0.00 40.14 3.18
6043 9009 7.565073 GCATACAGACAACGAAACAAATTGTTC 60.565 37.037 12.11 5.23 40.14 3.18
6044 9010 6.198216 GCATACAGACAACGAAACAAATTGTT 59.802 34.615 5.41 5.41 43.41 2.83
6049 9015 3.003897 GGGCATACAGACAACGAAACAAA 59.996 43.478 0.00 0.00 0.00 2.83
6056 9022 2.002586 CAAGAGGGCATACAGACAACG 58.997 52.381 0.00 0.00 0.00 4.10
6065 9031 0.466739 CATGCAGGCAAGAGGGCATA 60.467 55.000 0.00 0.00 44.55 3.14
6076 9042 1.678598 TTTAGCCCATGCATGCAGGC 61.679 55.000 33.01 33.01 46.13 4.85
6077 9043 1.000506 GATTTAGCCCATGCATGCAGG 59.999 52.381 26.69 25.77 41.13 4.85
6078 9044 1.684450 TGATTTAGCCCATGCATGCAG 59.316 47.619 26.69 16.97 41.13 4.41
6096 9062 6.343716 ACAACAAAATATCAGGCAATGTGA 57.656 33.333 0.00 0.00 0.00 3.58
6114 9080 6.625873 TTGTTCACTAACATGCATACAACA 57.374 33.333 0.00 0.00 44.85 3.33
6119 9085 5.073428 TGGGTTTGTTCACTAACATGCATA 58.927 37.500 0.00 0.00 44.85 3.14
6145 9112 5.695816 GCACACAATTAAAACCATGTCATGT 59.304 36.000 11.84 0.00 0.00 3.21
6150 9117 4.505922 CGTTGCACACAATTAAAACCATGT 59.494 37.500 0.00 0.00 38.27 3.21
6151 9118 4.608000 GCGTTGCACACAATTAAAACCATG 60.608 41.667 0.00 0.00 38.27 3.66
6152 9119 3.492756 GCGTTGCACACAATTAAAACCAT 59.507 39.130 0.00 0.00 38.27 3.55
6153 9120 2.860735 GCGTTGCACACAATTAAAACCA 59.139 40.909 0.00 0.00 38.27 3.67
6154 9121 2.219903 GGCGTTGCACACAATTAAAACC 59.780 45.455 0.00 0.00 38.27 3.27
6155 9122 3.060607 CAGGCGTTGCACACAATTAAAAC 60.061 43.478 0.00 0.00 38.27 2.43
6156 9123 3.119291 CAGGCGTTGCACACAATTAAAA 58.881 40.909 0.00 0.00 38.27 1.52
6160 9127 1.363443 CCAGGCGTTGCACACAATT 59.637 52.632 0.00 0.00 38.27 2.32
6161 9128 1.827789 ACCAGGCGTTGCACACAAT 60.828 52.632 0.00 0.00 38.27 2.71
6166 9133 1.588667 CAAACACCAGGCGTTGCAC 60.589 57.895 0.00 0.00 0.00 4.57
6182 9149 6.892658 TCAACTAGCCAAAAGAATTAGCAA 57.107 33.333 0.00 0.00 0.00 3.91
6191 9158 5.940470 AGTAACCTCATCAACTAGCCAAAAG 59.060 40.000 0.00 0.00 0.00 2.27
6215 9182 1.137282 TGGTTGTGTCGAAGTGTGCTA 59.863 47.619 0.00 0.00 0.00 3.49
6227 9194 9.276590 CTTATGATGTGTGATATATGGTTGTGT 57.723 33.333 0.00 0.00 0.00 3.72
6237 9204 5.861727 TGCTCTGCTTATGATGTGTGATAT 58.138 37.500 0.00 0.00 0.00 1.63
6387 9384 1.306997 CCAAGGACTAGGGCCAGGA 60.307 63.158 6.18 0.00 0.00 3.86
6390 9387 3.399181 CGCCAAGGACTAGGGCCA 61.399 66.667 6.18 0.00 44.90 5.36
6476 9473 0.761323 TCACTCCCGACACCCTCAAA 60.761 55.000 0.00 0.00 0.00 2.69
6511 9508 1.764723 AGATCAAGATCGGCCACATGA 59.235 47.619 2.24 2.64 42.48 3.07
6517 9514 4.394300 CCATTTATCAGATCAAGATCGGCC 59.606 45.833 5.48 0.00 42.48 6.13
6535 9532 0.611896 GGCCACCTACACAGCCATTT 60.612 55.000 0.00 0.00 45.07 2.32
6544 9541 0.844661 ATCAGGTTGGGCCACCTACA 60.845 55.000 22.08 14.51 46.27 2.74
6569 9567 2.501723 AGCTGATAAACGACAGGGTGAT 59.498 45.455 0.00 0.00 35.05 3.06
6662 9681 2.093973 CACCGAAGCTTGAGTGTATCCT 60.094 50.000 2.10 0.00 0.00 3.24
6667 9686 0.463654 TTGCACCGAAGCTTGAGTGT 60.464 50.000 20.78 4.62 34.99 3.55
6703 9724 3.234234 CCATGAGATGGCCCAACTAAT 57.766 47.619 0.00 0.00 44.70 1.73
6728 9753 1.674322 AAGCGCCGCAACTATGGTT 60.674 52.632 13.36 0.00 35.86 3.67
6833 9863 4.980805 TGTCGGAGGTTGTGCCGC 62.981 66.667 0.00 0.00 46.79 6.53
6835 9865 1.586154 CCAATGTCGGAGGTTGTGCC 61.586 60.000 2.75 0.00 37.58 5.01
6836 9866 0.605319 TCCAATGTCGGAGGTTGTGC 60.605 55.000 2.75 0.00 0.00 4.57
6837 9867 1.739466 CATCCAATGTCGGAGGTTGTG 59.261 52.381 0.00 0.00 38.83 3.33
6838 9868 1.628340 TCATCCAATGTCGGAGGTTGT 59.372 47.619 0.00 0.00 38.83 3.32
6839 9869 2.401583 TCATCCAATGTCGGAGGTTG 57.598 50.000 0.00 0.00 38.83 3.77
6840 9870 2.711542 GTTCATCCAATGTCGGAGGTT 58.288 47.619 0.00 0.00 38.83 3.50
6841 9871 1.405526 CGTTCATCCAATGTCGGAGGT 60.406 52.381 0.00 0.00 38.83 3.85
6846 9876 0.645355 CGGTCGTTCATCCAATGTCG 59.355 55.000 0.00 0.00 0.00 4.35
6848 9878 0.392461 CCCGGTCGTTCATCCAATGT 60.392 55.000 0.00 0.00 0.00 2.71
6865 9895 1.674651 GCACCGAAAAGGGTCTCCC 60.675 63.158 0.00 0.00 46.96 4.30
6866 9896 0.250770 AAGCACCGAAAAGGGTCTCC 60.251 55.000 0.00 0.00 46.96 3.71
6867 9897 0.875059 CAAGCACCGAAAAGGGTCTC 59.125 55.000 0.00 0.00 46.96 3.36
6868 9898 1.172812 GCAAGCACCGAAAAGGGTCT 61.173 55.000 0.00 0.00 46.96 3.85
6869 9899 1.285950 GCAAGCACCGAAAAGGGTC 59.714 57.895 0.00 0.00 46.96 4.46
6870 9900 2.200337 GGCAAGCACCGAAAAGGGT 61.200 57.895 0.00 0.00 46.96 4.34
6871 9901 2.650778 GGCAAGCACCGAAAAGGG 59.349 61.111 0.00 0.00 46.96 3.95
6873 9903 0.039165 GAAGGGCAAGCACCGAAAAG 60.039 55.000 0.00 0.00 0.00 2.27
6874 9904 1.791103 CGAAGGGCAAGCACCGAAAA 61.791 55.000 0.00 0.00 0.00 2.29
6875 9905 2.258013 CGAAGGGCAAGCACCGAAA 61.258 57.895 0.00 0.00 0.00 3.46
6876 9906 2.668212 CGAAGGGCAAGCACCGAA 60.668 61.111 0.00 0.00 0.00 4.30
6889 9919 1.970917 GCACCGAAGATGCACCGAAG 61.971 60.000 0.00 0.00 0.00 3.79
6890 9920 2.032634 GCACCGAAGATGCACCGAA 61.033 57.895 0.00 0.00 0.00 4.30
6891 9921 2.434185 GCACCGAAGATGCACCGA 60.434 61.111 0.00 0.00 0.00 4.69
6892 9922 2.034879 AAGCACCGAAGATGCACCG 61.035 57.895 0.00 0.00 0.00 4.94
6893 9923 1.503542 CAAGCACCGAAGATGCACC 59.496 57.895 0.00 0.00 0.00 5.01
6894 9924 1.154150 GCAAGCACCGAAGATGCAC 60.154 57.895 0.00 0.00 0.00 4.57
6895 9925 2.334946 GGCAAGCACCGAAGATGCA 61.335 57.895 0.00 0.00 0.00 3.96
6896 9926 1.589716 AAGGCAAGCACCGAAGATGC 61.590 55.000 0.00 0.00 33.69 3.91
6897 9927 0.449388 GAAGGCAAGCACCGAAGATG 59.551 55.000 0.00 0.00 33.69 2.90
6898 9928 0.678048 GGAAGGCAAGCACCGAAGAT 60.678 55.000 0.00 0.00 33.69 2.40
6899 9929 1.302511 GGAAGGCAAGCACCGAAGA 60.303 57.895 0.00 0.00 33.69 2.87
6900 9930 2.680913 CGGAAGGCAAGCACCGAAG 61.681 63.158 15.46 0.00 46.94 3.79
6901 9931 2.668212 CGGAAGGCAAGCACCGAA 60.668 61.111 15.46 0.00 46.94 4.30
6903 9933 2.436646 ATCGGAAGGCAAGCACCG 60.437 61.111 14.75 14.75 45.61 4.94
6904 9934 0.749454 ATCATCGGAAGGCAAGCACC 60.749 55.000 0.00 0.00 0.00 5.01
6905 9935 0.379669 CATCATCGGAAGGCAAGCAC 59.620 55.000 0.00 0.00 0.00 4.40
6906 9936 0.749091 CCATCATCGGAAGGCAAGCA 60.749 55.000 0.00 0.00 0.00 3.91
6907 9937 1.450531 CCCATCATCGGAAGGCAAGC 61.451 60.000 0.00 0.00 30.40 4.01
6908 9938 0.107017 ACCCATCATCGGAAGGCAAG 60.107 55.000 0.00 0.00 30.40 4.01
6909 9939 0.394216 CACCCATCATCGGAAGGCAA 60.394 55.000 0.00 0.00 30.40 4.52
6910 9940 1.224315 CACCCATCATCGGAAGGCA 59.776 57.895 0.00 0.00 30.40 4.75
6911 9941 1.526917 CCACCCATCATCGGAAGGC 60.527 63.158 0.00 0.00 30.40 4.35
6912 9942 1.526917 GCCACCCATCATCGGAAGG 60.527 63.158 0.00 0.00 0.00 3.46
6913 9943 0.816825 CTGCCACCCATCATCGGAAG 60.817 60.000 0.00 0.00 0.00 3.46
6914 9944 1.224315 CTGCCACCCATCATCGGAA 59.776 57.895 0.00 0.00 0.00 4.30
6915 9945 2.910360 CTGCCACCCATCATCGGA 59.090 61.111 0.00 0.00 0.00 4.55
6916 9946 2.903855 GCTGCCACCCATCATCGG 60.904 66.667 0.00 0.00 0.00 4.18
6917 9947 2.124612 TGCTGCCACCCATCATCG 60.125 61.111 0.00 0.00 0.00 3.84
6918 9948 0.754217 ATGTGCTGCCACCCATCATC 60.754 55.000 0.00 0.00 41.35 2.92
6919 9949 0.754217 GATGTGCTGCCACCCATCAT 60.754 55.000 0.00 0.00 41.35 2.45
6920 9950 1.378911 GATGTGCTGCCACCCATCA 60.379 57.895 0.00 0.00 41.35 3.07
6921 9951 0.682209 AAGATGTGCTGCCACCCATC 60.682 55.000 0.00 4.09 41.35 3.51
6922 9952 0.682209 GAAGATGTGCTGCCACCCAT 60.682 55.000 0.00 0.00 41.35 4.00
6923 9953 1.303561 GAAGATGTGCTGCCACCCA 60.304 57.895 0.00 0.00 41.35 4.51
6924 9954 1.303561 TGAAGATGTGCTGCCACCC 60.304 57.895 0.00 0.00 41.35 4.61
6925 9955 0.607489 ACTGAAGATGTGCTGCCACC 60.607 55.000 0.00 0.00 41.35 4.61
6926 9956 0.520404 CACTGAAGATGTGCTGCCAC 59.480 55.000 0.00 0.00 42.40 5.01
6927 9957 2.936928 CACTGAAGATGTGCTGCCA 58.063 52.632 0.00 0.00 0.00 4.92
6933 9963 0.524862 GGGCAAGCACTGAAGATGTG 59.475 55.000 0.00 0.00 38.36 3.21
6934 9964 0.403271 AGGGCAAGCACTGAAGATGT 59.597 50.000 0.00 0.00 0.00 3.06
6935 9965 1.201647 CAAGGGCAAGCACTGAAGATG 59.798 52.381 0.00 0.00 0.00 2.90
6936 9966 1.202976 ACAAGGGCAAGCACTGAAGAT 60.203 47.619 0.00 0.00 0.00 2.40
6937 9967 0.183492 ACAAGGGCAAGCACTGAAGA 59.817 50.000 0.00 0.00 0.00 2.87
6938 9968 1.035139 AACAAGGGCAAGCACTGAAG 58.965 50.000 0.00 0.00 0.00 3.02
6939 9969 0.746063 CAACAAGGGCAAGCACTGAA 59.254 50.000 0.00 0.00 0.00 3.02
6940 9970 0.395586 ACAACAAGGGCAAGCACTGA 60.396 50.000 0.00 0.00 0.00 3.41
6941 9971 0.031178 GACAACAAGGGCAAGCACTG 59.969 55.000 0.00 0.00 0.00 3.66
6942 9972 0.395586 TGACAACAAGGGCAAGCACT 60.396 50.000 0.00 0.00 0.00 4.40
6943 9973 0.459489 TTGACAACAAGGGCAAGCAC 59.541 50.000 0.00 0.00 0.00 4.40
6976 10007 4.858850 AGAACAATGAGATGGGCACATAA 58.141 39.130 0.00 0.00 37.47 1.90
6978 10009 3.377253 AGAACAATGAGATGGGCACAT 57.623 42.857 0.00 0.00 40.85 3.21
6995 10026 3.385193 TTGTGTGCAGATCGAGAAGAA 57.615 42.857 0.00 0.00 0.00 2.52
6999 10030 3.317603 TGAATTGTGTGCAGATCGAGA 57.682 42.857 0.00 0.00 0.00 4.04
7044 10075 7.763172 ACGACATTCTCTTCAATAAGACATC 57.237 36.000 0.00 0.00 36.80 3.06
7096 10127 9.894783 GTGAGTAAAATATAAGCACGATAGAGA 57.105 33.333 0.00 0.00 41.38 3.10
7097 10128 9.130312 GGTGAGTAAAATATAAGCACGATAGAG 57.870 37.037 0.00 0.00 41.38 2.43
7098 10129 8.086522 GGGTGAGTAAAATATAAGCACGATAGA 58.913 37.037 0.00 0.00 41.38 1.98
7101 10132 6.706270 CAGGGTGAGTAAAATATAAGCACGAT 59.294 38.462 0.00 0.00 0.00 3.73
7105 10136 5.130350 GGCAGGGTGAGTAAAATATAAGCA 58.870 41.667 0.00 0.00 0.00 3.91
7106 10137 4.519350 GGGCAGGGTGAGTAAAATATAAGC 59.481 45.833 0.00 0.00 0.00 3.09
7108 10139 5.718801 TGGGCAGGGTGAGTAAAATATAA 57.281 39.130 0.00 0.00 0.00 0.98
7109 10140 5.371176 TGATGGGCAGGGTGAGTAAAATATA 59.629 40.000 0.00 0.00 0.00 0.86
7110 10141 4.167892 TGATGGGCAGGGTGAGTAAAATAT 59.832 41.667 0.00 0.00 0.00 1.28
7111 10142 3.525609 TGATGGGCAGGGTGAGTAAAATA 59.474 43.478 0.00 0.00 0.00 1.40
7112 10143 2.311542 TGATGGGCAGGGTGAGTAAAAT 59.688 45.455 0.00 0.00 0.00 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.