Multiple sequence alignment - TraesCS6A01G080500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G080500 chr6A 100.000 4621 0 0 1 4621 49152859 49148239 0.000000e+00 8534.0
1 TraesCS6A01G080500 chr6A 97.917 48 0 1 1 47 582418133 582418086 1.070000e-11 82.4
2 TraesCS6A01G080500 chr6A 100.000 43 0 0 1 43 117001299 117001341 3.830000e-11 80.5
3 TraesCS6A01G080500 chr6A 93.750 48 3 0 2657 2704 542233819 542233772 6.410000e-09 73.1
4 TraesCS6A01G080500 chr6D 92.742 1860 86 25 39 1883 37906651 37904826 0.000000e+00 2641.0
5 TraesCS6A01G080500 chr6D 88.571 945 57 23 2824 3742 37903826 37902907 0.000000e+00 1099.0
6 TraesCS6A01G080500 chr6D 86.170 846 66 25 3779 4621 37902908 37902111 0.000000e+00 867.0
7 TraesCS6A01G080500 chr6D 91.860 172 11 3 2455 2623 37904081 37903910 2.150000e-58 237.0
8 TraesCS6A01G080500 chr6B 91.695 1469 72 19 401 1857 88656813 88655383 0.000000e+00 1991.0
9 TraesCS6A01G080500 chr6B 88.407 854 52 15 3045 3885 88654097 88653278 0.000000e+00 985.0
10 TraesCS6A01G080500 chr6B 88.353 249 22 6 2376 2623 88654526 88654284 4.520000e-75 292.0
11 TraesCS6A01G080500 chr6B 79.487 429 47 16 4154 4566 88648669 88648266 2.740000e-67 267.0
12 TraesCS6A01G080500 chr6B 88.710 186 17 3 2705 2888 88654287 88654104 1.670000e-54 224.0
13 TraesCS6A01G080500 chr6B 100.000 43 0 0 1 43 84131410 84131452 3.830000e-11 80.5
14 TraesCS6A01G080500 chr1B 81.059 491 66 11 1109 1578 431449025 431448541 2.630000e-97 366.0
15 TraesCS6A01G080500 chr1B 100.000 33 0 0 2568 2600 662005505 662005537 1.390000e-05 62.1
16 TraesCS6A01G080500 chr1B 87.500 48 6 0 2553 2600 662020586 662020633 6.460000e-04 56.5
17 TraesCS6A01G080500 chr1A 80.533 488 65 14 1109 1575 404503584 404504062 9.520000e-92 348.0
18 TraesCS6A01G080500 chr1A 95.833 48 1 1 1 48 299632906 299632860 4.960000e-10 76.8
19 TraesCS6A01G080500 chr1A 95.833 48 1 1 1 48 575936805 575936851 4.960000e-10 76.8
20 TraesCS6A01G080500 chr1A 100.000 33 0 0 2568 2600 571725059 571725091 1.390000e-05 62.1
21 TraesCS6A01G080500 chr1A 96.970 33 1 0 2568 2600 571737804 571737836 6.460000e-04 56.5
22 TraesCS6A01G080500 chr1D 74.118 1190 145 72 620 1755 318886838 318885758 1.590000e-89 340.0
23 TraesCS6A01G080500 chr1D 96.970 33 1 0 2568 2600 475913535 475913567 6.460000e-04 56.5
24 TraesCS6A01G080500 chr3A 96.000 50 2 0 1 50 30162087 30162038 1.070000e-11 82.4
25 TraesCS6A01G080500 chr5A 96.000 50 1 1 1 49 674656620 674656669 3.830000e-11 80.5
26 TraesCS6A01G080500 chr5A 92.453 53 4 0 1 53 664551203 664551151 4.960000e-10 76.8
27 TraesCS6A01G080500 chr3B 94.118 51 2 1 1 51 543750778 543750729 4.960000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G080500 chr6A 49148239 49152859 4620 True 8534 8534 100.00000 1 4621 1 chr6A.!!$R1 4620
1 TraesCS6A01G080500 chr6D 37902111 37906651 4540 True 1211 2641 89.83575 39 4621 4 chr6D.!!$R1 4582
2 TraesCS6A01G080500 chr6B 88653278 88656813 3535 True 873 1991 89.29125 401 3885 4 chr6B.!!$R2 3484
3 TraesCS6A01G080500 chr1D 318885758 318886838 1080 True 340 340 74.11800 620 1755 1 chr1D.!!$R1 1135

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
541 544 0.032952 TGCTAGTGGTGTTGTCGTCC 59.967 55.0 0.00 0.0 0.00 4.79 F
2066 2428 0.041312 GCATTGCTCGTCGTGTTGTT 60.041 50.0 0.16 0.0 0.00 2.83 F
2231 2773 0.319641 GGGAGGTCACTGACGACAAC 60.320 60.0 3.04 0.0 37.66 3.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2147 2615 0.037326 CCAACTTCTCGCTGGTGCTA 60.037 55.0 0.00 0.00 36.97 3.49 R
3542 4282 0.249699 AGTTGAACATGACGTCGGCA 60.250 50.0 1.64 1.64 0.00 5.69 R
3633 4379 0.745845 ATCCAGATCGTTGCCTGCAC 60.746 55.0 0.00 0.00 0.00 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 7.172654 TGCATTGCACGTACATTATTACTAG 57.827 36.000 7.38 0.00 31.71 2.57
63 64 3.440127 ACCAAATGGGATTAAGTGTGGG 58.560 45.455 4.17 0.00 41.15 4.61
66 67 4.085733 CAAATGGGATTAAGTGTGGGTCA 58.914 43.478 0.00 0.00 0.00 4.02
88 89 4.734398 TCCCATTCCATTTGTATGTTGC 57.266 40.909 0.00 0.00 0.00 4.17
94 95 6.091169 CCATTCCATTTGTATGTTGCAGTTTC 59.909 38.462 0.00 0.00 0.00 2.78
95 96 6.403866 TTCCATTTGTATGTTGCAGTTTCT 57.596 33.333 0.00 0.00 0.00 2.52
96 97 6.012658 TCCATTTGTATGTTGCAGTTTCTC 57.987 37.500 0.00 0.00 0.00 2.87
99 100 3.500448 TGTATGTTGCAGTTTCTCCCA 57.500 42.857 0.00 0.00 0.00 4.37
100 101 4.032960 TGTATGTTGCAGTTTCTCCCAT 57.967 40.909 0.00 0.00 0.00 4.00
101 102 3.758023 TGTATGTTGCAGTTTCTCCCATG 59.242 43.478 0.00 0.00 0.00 3.66
123 124 5.656480 TGCATGTTGATGATTTCATTCCAG 58.344 37.500 0.00 0.00 36.57 3.86
138 139 4.635765 TCATTCCAGAAAATAAGCTGACCG 59.364 41.667 0.00 0.00 34.06 4.79
151 152 4.853924 AGCTGACCGAATTGAAAACAAT 57.146 36.364 0.00 0.00 0.00 2.71
209 210 8.551205 ACATCATATATGCTTGTTTAACTGACG 58.449 33.333 7.92 0.00 0.00 4.35
226 227 2.029828 TGACGTTGTGTGGTTTGCTTTT 60.030 40.909 0.00 0.00 0.00 2.27
318 321 7.120579 TGTCACTTACTGTCTTTTGTTGTCATT 59.879 33.333 0.00 0.00 0.00 2.57
387 390 1.189752 ATCCTTTCAGAGCTCGCTCA 58.810 50.000 19.91 0.00 44.99 4.26
388 391 0.529833 TCCTTTCAGAGCTCGCTCAG 59.470 55.000 19.91 12.69 44.99 3.35
479 482 7.255836 GGTTTGGACTTTATTAGTTGAAAGCCT 60.256 37.037 0.00 0.00 37.17 4.58
480 483 6.817765 TGGACTTTATTAGTTGAAAGCCTG 57.182 37.500 0.00 0.00 37.17 4.85
518 521 6.423905 TCCTTCGTTCTAAACAAAGATCACAG 59.576 38.462 0.00 0.00 0.00 3.66
523 526 9.087424 TCGTTCTAAACAAAGATCACAGATATG 57.913 33.333 0.00 0.00 0.00 1.78
541 544 0.032952 TGCTAGTGGTGTTGTCGTCC 59.967 55.000 0.00 0.00 0.00 4.79
542 545 0.032952 GCTAGTGGTGTTGTCGTCCA 59.967 55.000 0.00 0.00 0.00 4.02
547 550 2.958016 GTGTTGTCGTCCACGCGT 60.958 61.111 5.58 5.58 39.60 6.01
764 769 2.034066 ACCACCCGACCAGCAATG 59.966 61.111 0.00 0.00 0.00 2.82
911 927 3.260884 CGGTGGTGCCCTCACTTATATAT 59.739 47.826 0.00 0.00 42.72 0.86
912 928 4.464951 CGGTGGTGCCCTCACTTATATATA 59.535 45.833 0.00 0.00 42.72 0.86
953 981 1.268999 GCCGTGACACAAAATCTTGCA 60.269 47.619 6.37 0.00 35.84 4.08
955 983 2.384382 CGTGACACAAAATCTTGCACC 58.616 47.619 6.37 0.00 35.84 5.01
965 993 1.251251 ATCTTGCACCCACTTTGCTC 58.749 50.000 0.00 0.00 40.86 4.26
1047 1085 1.227823 TCCTCCGTTTGCACCACTG 60.228 57.895 0.00 0.00 0.00 3.66
1070 1113 1.065928 GCTACCTGGATCGTCGTGG 59.934 63.158 0.00 0.00 0.00 4.94
1254 1300 1.153529 CGCCTACAACACGGCCATA 60.154 57.895 2.24 0.00 43.38 2.74
1258 1304 0.459585 CTACAACACGGCCATACGCT 60.460 55.000 2.24 0.00 37.74 5.07
1267 1313 2.108514 GCCATACGCTTGCTGCAGA 61.109 57.895 20.43 0.00 43.06 4.26
1398 1444 1.682684 GCTTCTCGGGGAGACTCCA 60.683 63.158 23.06 1.70 38.51 3.86
1401 1447 0.114560 TTCTCGGGGAGACTCCAACT 59.885 55.000 23.06 0.00 38.51 3.16
1409 1464 1.830477 GGAGACTCCAACTCATCTGCT 59.170 52.381 17.10 0.00 36.28 4.24
1645 1718 1.324383 GGGGTCAACGGTTCAAACAT 58.676 50.000 0.00 0.00 0.00 2.71
1833 1918 8.442374 ACTTTTAATTATGTCGGGTATATGGGT 58.558 33.333 0.00 0.00 0.00 4.51
1834 1919 8.624367 TTTTAATTATGTCGGGTATATGGGTG 57.376 34.615 0.00 0.00 0.00 4.61
1869 2231 2.169352 CTCGGTGAGGATCCATGACTTT 59.831 50.000 15.82 0.00 0.00 2.66
1870 2232 3.371034 TCGGTGAGGATCCATGACTTTA 58.629 45.455 15.82 0.00 0.00 1.85
1871 2233 3.967326 TCGGTGAGGATCCATGACTTTAT 59.033 43.478 15.82 0.00 0.00 1.40
1872 2234 4.408921 TCGGTGAGGATCCATGACTTTATT 59.591 41.667 15.82 0.00 0.00 1.40
1873 2235 5.600898 TCGGTGAGGATCCATGACTTTATTA 59.399 40.000 15.82 0.00 0.00 0.98
1874 2236 5.928839 CGGTGAGGATCCATGACTTTATTAG 59.071 44.000 15.82 0.00 0.00 1.73
1875 2237 6.463049 CGGTGAGGATCCATGACTTTATTAGT 60.463 42.308 15.82 0.00 40.71 2.24
1890 2252 9.659830 GACTTTATTAGTCGTGTTGTGAAAATT 57.340 29.630 0.00 0.00 43.59 1.82
1891 2253 9.659830 ACTTTATTAGTCGTGTTGTGAAAATTC 57.340 29.630 0.00 0.00 28.23 2.17
1892 2254 9.878599 CTTTATTAGTCGTGTTGTGAAAATTCT 57.121 29.630 0.00 0.00 0.00 2.40
1896 2258 9.659830 ATTAGTCGTGTTGTGAAAATTCTTTAC 57.340 29.630 0.00 0.00 0.00 2.01
1897 2259 7.316544 AGTCGTGTTGTGAAAATTCTTTACT 57.683 32.000 0.00 0.00 0.00 2.24
1898 2260 7.407337 AGTCGTGTTGTGAAAATTCTTTACTC 58.593 34.615 0.00 0.00 0.00 2.59
1899 2261 7.065324 AGTCGTGTTGTGAAAATTCTTTACTCA 59.935 33.333 0.00 0.00 0.00 3.41
1900 2262 7.163682 GTCGTGTTGTGAAAATTCTTTACTCAC 59.836 37.037 0.00 0.00 0.00 3.51
1901 2263 6.964370 CGTGTTGTGAAAATTCTTTACTCACA 59.036 34.615 0.00 0.00 35.25 3.58
1902 2264 7.164171 CGTGTTGTGAAAATTCTTTACTCACAG 59.836 37.037 3.70 0.00 37.80 3.66
1903 2265 8.181573 GTGTTGTGAAAATTCTTTACTCACAGA 58.818 33.333 3.70 0.00 37.80 3.41
1904 2266 8.397906 TGTTGTGAAAATTCTTTACTCACAGAG 58.602 33.333 3.70 0.00 37.80 3.35
1905 2267 7.496529 TGTGAAAATTCTTTACTCACAGAGG 57.503 36.000 0.00 0.00 33.35 3.69
1906 2268 7.054124 TGTGAAAATTCTTTACTCACAGAGGT 58.946 34.615 0.00 0.00 33.35 3.85
1907 2269 7.556275 TGTGAAAATTCTTTACTCACAGAGGTT 59.444 33.333 0.00 0.00 33.35 3.50
1908 2270 9.052759 GTGAAAATTCTTTACTCACAGAGGTTA 57.947 33.333 0.00 0.00 33.35 2.85
1909 2271 9.793259 TGAAAATTCTTTACTCACAGAGGTTAT 57.207 29.630 0.00 0.00 33.35 1.89
1912 2274 8.928270 AATTCTTTACTCACAGAGGTTATACG 57.072 34.615 0.00 0.00 33.35 3.06
1913 2275 6.446781 TCTTTACTCACAGAGGTTATACGG 57.553 41.667 0.00 0.00 33.35 4.02
1914 2276 5.359009 TCTTTACTCACAGAGGTTATACGGG 59.641 44.000 0.00 0.00 33.35 5.28
1915 2277 2.385803 ACTCACAGAGGTTATACGGGG 58.614 52.381 0.00 0.00 33.35 5.73
1916 2278 2.292061 ACTCACAGAGGTTATACGGGGT 60.292 50.000 0.00 0.00 33.35 4.95
1917 2279 3.053395 ACTCACAGAGGTTATACGGGGTA 60.053 47.826 0.00 0.00 33.35 3.69
1918 2280 4.150359 CTCACAGAGGTTATACGGGGTAT 58.850 47.826 0.00 0.00 33.05 2.73
1919 2281 4.549668 TCACAGAGGTTATACGGGGTATT 58.450 43.478 0.00 0.00 30.79 1.89
1920 2282 4.964262 TCACAGAGGTTATACGGGGTATTT 59.036 41.667 0.00 0.00 30.79 1.40
1921 2283 5.426185 TCACAGAGGTTATACGGGGTATTTT 59.574 40.000 0.00 0.00 30.79 1.82
1922 2284 5.756833 CACAGAGGTTATACGGGGTATTTTC 59.243 44.000 0.00 0.00 30.79 2.29
1923 2285 5.664457 ACAGAGGTTATACGGGGTATTTTCT 59.336 40.000 0.00 0.00 30.79 2.52
1924 2286 6.840705 ACAGAGGTTATACGGGGTATTTTCTA 59.159 38.462 0.00 0.00 30.79 2.10
1925 2287 7.345392 ACAGAGGTTATACGGGGTATTTTCTAA 59.655 37.037 0.00 0.00 30.79 2.10
1926 2288 7.654923 CAGAGGTTATACGGGGTATTTTCTAAC 59.345 40.741 0.00 0.00 30.79 2.34
1927 2289 7.566509 AGAGGTTATACGGGGTATTTTCTAACT 59.433 37.037 0.00 0.00 30.79 2.24
1928 2290 8.782137 AGGTTATACGGGGTATTTTCTAACTA 57.218 34.615 0.00 0.00 30.79 2.24
1929 2291 9.212593 AGGTTATACGGGGTATTTTCTAACTAA 57.787 33.333 0.00 0.00 30.79 2.24
1934 2296 9.939802 ATACGGGGTATTTTCTAACTAATCATC 57.060 33.333 0.00 0.00 0.00 2.92
1935 2297 8.030913 ACGGGGTATTTTCTAACTAATCATCT 57.969 34.615 0.00 0.00 0.00 2.90
1936 2298 8.491958 ACGGGGTATTTTCTAACTAATCATCTT 58.508 33.333 0.00 0.00 0.00 2.40
1937 2299 8.989980 CGGGGTATTTTCTAACTAATCATCTTC 58.010 37.037 0.00 0.00 0.00 2.87
1944 2306 7.613551 TTCTAACTAATCATCTTCTACCCCC 57.386 40.000 0.00 0.00 0.00 5.40
1977 2339 4.147135 GTGGGAGCCCTCACCTTA 57.853 61.111 7.16 0.00 36.94 2.69
1978 2340 1.602771 GTGGGAGCCCTCACCTTAC 59.397 63.158 7.16 0.00 36.94 2.34
1979 2341 0.910088 GTGGGAGCCCTCACCTTACT 60.910 60.000 7.16 0.00 36.94 2.24
1980 2342 0.909610 TGGGAGCCCTCACCTTACTG 60.910 60.000 7.16 0.00 36.94 2.74
1981 2343 1.222113 GGAGCCCTCACCTTACTGC 59.778 63.158 0.00 0.00 0.00 4.40
1982 2344 1.268283 GGAGCCCTCACCTTACTGCT 61.268 60.000 0.00 0.00 0.00 4.24
1983 2345 1.486211 GAGCCCTCACCTTACTGCTA 58.514 55.000 0.00 0.00 0.00 3.49
1984 2346 2.043227 GAGCCCTCACCTTACTGCTAT 58.957 52.381 0.00 0.00 0.00 2.97
1985 2347 2.036604 GAGCCCTCACCTTACTGCTATC 59.963 54.545 0.00 0.00 0.00 2.08
1986 2348 1.070914 GCCCTCACCTTACTGCTATCC 59.929 57.143 0.00 0.00 0.00 2.59
1987 2349 2.398588 CCCTCACCTTACTGCTATCCA 58.601 52.381 0.00 0.00 0.00 3.41
1988 2350 2.771943 CCCTCACCTTACTGCTATCCAA 59.228 50.000 0.00 0.00 0.00 3.53
1989 2351 3.392616 CCCTCACCTTACTGCTATCCAAT 59.607 47.826 0.00 0.00 0.00 3.16
1990 2352 4.593206 CCCTCACCTTACTGCTATCCAATA 59.407 45.833 0.00 0.00 0.00 1.90
1991 2353 5.071788 CCCTCACCTTACTGCTATCCAATAA 59.928 44.000 0.00 0.00 0.00 1.40
1992 2354 6.409234 CCCTCACCTTACTGCTATCCAATAAA 60.409 42.308 0.00 0.00 0.00 1.40
1993 2355 7.054124 CCTCACCTTACTGCTATCCAATAAAA 58.946 38.462 0.00 0.00 0.00 1.52
1994 2356 7.556275 CCTCACCTTACTGCTATCCAATAAAAA 59.444 37.037 0.00 0.00 0.00 1.94
1995 2357 8.276252 TCACCTTACTGCTATCCAATAAAAAC 57.724 34.615 0.00 0.00 0.00 2.43
1996 2358 7.885922 TCACCTTACTGCTATCCAATAAAAACA 59.114 33.333 0.00 0.00 0.00 2.83
1997 2359 8.686334 CACCTTACTGCTATCCAATAAAAACAT 58.314 33.333 0.00 0.00 0.00 2.71
1998 2360 8.686334 ACCTTACTGCTATCCAATAAAAACATG 58.314 33.333 0.00 0.00 0.00 3.21
1999 2361 7.649306 CCTTACTGCTATCCAATAAAAACATGC 59.351 37.037 0.00 0.00 0.00 4.06
2000 2362 5.906073 ACTGCTATCCAATAAAAACATGCC 58.094 37.500 0.00 0.00 0.00 4.40
2001 2363 5.421693 ACTGCTATCCAATAAAAACATGCCA 59.578 36.000 0.00 0.00 0.00 4.92
2002 2364 6.070881 ACTGCTATCCAATAAAAACATGCCAA 60.071 34.615 0.00 0.00 0.00 4.52
2003 2365 6.105333 TGCTATCCAATAAAAACATGCCAAC 58.895 36.000 0.00 0.00 0.00 3.77
2004 2366 6.105333 GCTATCCAATAAAAACATGCCAACA 58.895 36.000 0.00 0.00 0.00 3.33
2005 2367 6.593382 GCTATCCAATAAAAACATGCCAACAA 59.407 34.615 0.00 0.00 0.00 2.83
2006 2368 7.118971 GCTATCCAATAAAAACATGCCAACAAA 59.881 33.333 0.00 0.00 0.00 2.83
2007 2369 7.814264 ATCCAATAAAAACATGCCAACAAAA 57.186 28.000 0.00 0.00 0.00 2.44
2008 2370 7.020914 TCCAATAAAAACATGCCAACAAAAC 57.979 32.000 0.00 0.00 0.00 2.43
2009 2371 6.038714 TCCAATAAAAACATGCCAACAAAACC 59.961 34.615 0.00 0.00 0.00 3.27
2010 2372 6.183360 CCAATAAAAACATGCCAACAAAACCA 60.183 34.615 0.00 0.00 0.00 3.67
2011 2373 4.693538 AAAAACATGCCAACAAAACCAC 57.306 36.364 0.00 0.00 0.00 4.16
2012 2374 3.625649 AAACATGCCAACAAAACCACT 57.374 38.095 0.00 0.00 0.00 4.00
2013 2375 2.888834 ACATGCCAACAAAACCACTC 57.111 45.000 0.00 0.00 0.00 3.51
2014 2376 1.412343 ACATGCCAACAAAACCACTCC 59.588 47.619 0.00 0.00 0.00 3.85
2015 2377 0.673437 ATGCCAACAAAACCACTCCG 59.327 50.000 0.00 0.00 0.00 4.63
2016 2378 0.681564 TGCCAACAAAACCACTCCGT 60.682 50.000 0.00 0.00 0.00 4.69
2017 2379 0.458260 GCCAACAAAACCACTCCGTT 59.542 50.000 0.00 0.00 0.00 4.44
2018 2380 1.801025 GCCAACAAAACCACTCCGTTG 60.801 52.381 0.00 0.00 37.33 4.10
2019 2381 1.746220 CCAACAAAACCACTCCGTTGA 59.254 47.619 0.00 0.00 39.39 3.18
2020 2382 2.360801 CCAACAAAACCACTCCGTTGAT 59.639 45.455 0.00 0.00 39.39 2.57
2021 2383 3.550030 CCAACAAAACCACTCCGTTGATC 60.550 47.826 0.00 0.00 39.39 2.92
2022 2384 2.227194 ACAAAACCACTCCGTTGATCC 58.773 47.619 0.00 0.00 0.00 3.36
2023 2385 1.539827 CAAAACCACTCCGTTGATCCC 59.460 52.381 0.00 0.00 0.00 3.85
2024 2386 0.321298 AAACCACTCCGTTGATCCCG 60.321 55.000 0.00 0.00 0.00 5.14
2025 2387 1.477685 AACCACTCCGTTGATCCCGT 61.478 55.000 0.00 0.00 0.00 5.28
2026 2388 0.612732 ACCACTCCGTTGATCCCGTA 60.613 55.000 0.00 0.00 0.00 4.02
2027 2389 0.533491 CCACTCCGTTGATCCCGTAA 59.467 55.000 0.00 0.00 0.00 3.18
2028 2390 1.066716 CCACTCCGTTGATCCCGTAAA 60.067 52.381 0.00 0.00 0.00 2.01
2029 2391 2.613474 CCACTCCGTTGATCCCGTAAAA 60.613 50.000 0.00 0.00 0.00 1.52
2030 2392 3.068560 CACTCCGTTGATCCCGTAAAAA 58.931 45.455 0.00 0.00 0.00 1.94
2065 2427 0.880278 AGCATTGCTCGTCGTGTTGT 60.880 50.000 5.03 0.00 30.62 3.32
2066 2428 0.041312 GCATTGCTCGTCGTGTTGTT 60.041 50.000 0.16 0.00 0.00 2.83
2068 2430 2.036217 CATTGCTCGTCGTGTTGTTTG 58.964 47.619 0.00 0.00 0.00 2.93
2075 2437 2.349275 TCGTCGTGTTGTTTGTTCTTCC 59.651 45.455 0.00 0.00 0.00 3.46
2084 2446 3.351740 TGTTTGTTCTTCCTGTGCTTGA 58.648 40.909 0.00 0.00 0.00 3.02
2085 2447 3.761218 TGTTTGTTCTTCCTGTGCTTGAA 59.239 39.130 0.00 0.00 0.00 2.69
2086 2448 4.219507 TGTTTGTTCTTCCTGTGCTTGAAA 59.780 37.500 0.00 0.00 0.00 2.69
2089 2451 4.206375 TGTTCTTCCTGTGCTTGAAATCA 58.794 39.130 0.00 0.00 0.00 2.57
2116 2584 1.256376 GCGTCAGTCGAATATGTGCAG 59.744 52.381 0.00 0.00 42.86 4.41
2134 2602 2.438614 CCTCCGAGGCAGAGACGA 60.439 66.667 0.18 0.00 32.86 4.20
2136 2604 2.033602 TCCGAGGCAGAGACGACA 59.966 61.111 0.00 0.00 0.00 4.35
2138 2606 2.336478 CCGAGGCAGAGACGACACT 61.336 63.158 0.00 0.00 0.00 3.55
2140 2608 1.135731 GAGGCAGAGACGACACTCG 59.864 63.158 0.00 0.00 46.93 4.18
2141 2609 2.505118 GGCAGAGACGACACTCGC 60.505 66.667 0.00 3.79 45.12 5.03
2143 2611 2.083522 GCAGAGACGACACTCGCAC 61.084 63.158 0.00 0.00 45.12 5.34
2147 2615 4.702081 GACGACACTCGCACGGCT 62.702 66.667 0.00 0.00 45.12 5.52
2152 2620 3.181967 CACTCGCACGGCTAGCAC 61.182 66.667 18.24 5.06 0.00 4.40
2153 2621 4.436998 ACTCGCACGGCTAGCACC 62.437 66.667 18.24 0.00 0.00 5.01
2154 2622 4.435436 CTCGCACGGCTAGCACCA 62.435 66.667 18.24 0.00 0.00 4.17
2164 2632 0.390472 GCTAGCACCAGCGAGAAGTT 60.390 55.000 10.63 0.00 45.12 2.66
2171 2639 1.372087 CCAGCGAGAAGTTGGGATGC 61.372 60.000 0.00 0.00 46.12 3.91
2172 2640 1.078143 AGCGAGAAGTTGGGATGCC 60.078 57.895 0.00 0.00 0.00 4.40
2173 2641 2.464459 GCGAGAAGTTGGGATGCCG 61.464 63.158 0.00 0.00 0.00 5.69
2175 2643 2.044946 AGAAGTTGGGATGCCGGC 60.045 61.111 22.73 22.73 0.00 6.13
2191 2733 2.738521 GCGAGGCTGAGCGTTGAA 60.739 61.111 17.86 0.00 30.29 2.69
2213 2755 1.490910 GATTCAGGTACCTTGGAGGGG 59.509 57.143 13.15 0.00 40.58 4.79
2215 2757 1.082206 CAGGTACCTTGGAGGGGGA 59.918 63.158 13.15 0.00 40.58 4.81
2221 2763 2.301738 CCTTGGAGGGGGAGGTCAC 61.302 68.421 0.00 0.00 0.00 3.67
2222 2764 1.229658 CTTGGAGGGGGAGGTCACT 60.230 63.158 0.00 0.00 0.00 3.41
2223 2765 1.538876 TTGGAGGGGGAGGTCACTG 60.539 63.158 0.00 0.00 0.00 3.66
2224 2766 2.043527 TTGGAGGGGGAGGTCACTGA 62.044 60.000 0.00 0.00 0.00 3.41
2229 2771 1.906824 GGGGAGGTCACTGACGACA 60.907 63.158 3.04 0.00 37.66 4.35
2230 2772 1.469335 GGGGAGGTCACTGACGACAA 61.469 60.000 3.04 0.00 37.66 3.18
2231 2773 0.319641 GGGAGGTCACTGACGACAAC 60.320 60.000 3.04 0.00 37.66 3.32
2250 2792 2.747177 ACATCATGTCGGGGTTAGAGA 58.253 47.619 0.00 0.00 0.00 3.10
2254 2796 4.202245 TCATGTCGGGGTTAGAGAAAAG 57.798 45.455 0.00 0.00 0.00 2.27
2284 2898 0.737367 TCGGCGAGCAGATGTTGAAG 60.737 55.000 4.99 0.00 0.00 3.02
2296 2911 4.699257 CAGATGTTGAAGGGGAAGAAGAAG 59.301 45.833 0.00 0.00 0.00 2.85
2298 2913 5.252630 AGATGTTGAAGGGGAAGAAGAAGAT 59.747 40.000 0.00 0.00 0.00 2.40
2318 2933 2.627945 TCGTGGTCTGTTGGATATTGC 58.372 47.619 0.00 0.00 0.00 3.56
2319 2934 1.670811 CGTGGTCTGTTGGATATTGCC 59.329 52.381 0.00 0.00 0.00 4.52
2330 2945 5.128499 TGTTGGATATTGCCGGAAATTCAAT 59.872 36.000 14.41 11.09 35.02 2.57
2332 2947 6.968263 TGGATATTGCCGGAAATTCAATTA 57.032 33.333 14.41 0.00 33.13 1.40
2336 2951 8.925700 GGATATTGCCGGAAATTCAATTAAATC 58.074 33.333 14.41 7.33 33.13 2.17
2337 2952 9.474920 GATATTGCCGGAAATTCAATTAAATCA 57.525 29.630 14.41 0.00 33.13 2.57
2372 2992 3.455152 TCGATAGCCGACCCCATG 58.545 61.111 0.00 0.00 43.23 3.66
2385 3033 3.493350 CGACCCCATGATGAAAGACCTAG 60.493 52.174 0.00 0.00 0.00 3.02
2386 3034 2.173569 ACCCCATGATGAAAGACCTAGC 59.826 50.000 0.00 0.00 0.00 3.42
2403 3051 4.253685 CCTAGCTAGCTAGTTTGTGCAAA 58.746 43.478 37.50 12.16 43.22 3.68
2432 3081 6.698766 TGTTAAGTCGTTTGAGTTTCCTAGAC 59.301 38.462 0.00 0.00 38.66 2.59
2441 3090 9.074443 CGTTTGAGTTTCCTAGACTACTAATTC 57.926 37.037 0.00 0.00 0.00 2.17
2509 3231 1.528542 CGGGCAGAGGGAGACGATA 60.529 63.158 0.00 0.00 0.00 2.92
2511 3233 0.892063 GGGCAGAGGGAGACGATATC 59.108 60.000 0.00 0.00 0.00 1.63
2538 3260 1.678635 CACACCGGATGGGCAACAT 60.679 57.895 9.46 0.00 44.18 2.71
2619 3341 2.093075 GCTCTAGGTTCCCAAGGTAACC 60.093 54.545 5.52 5.52 44.59 2.85
2620 3342 3.178865 CTCTAGGTTCCCAAGGTAACCA 58.821 50.000 14.97 2.04 46.29 3.67
2621 3343 3.585732 CTCTAGGTTCCCAAGGTAACCAA 59.414 47.826 14.97 0.99 46.29 3.67
2622 3344 3.982052 TCTAGGTTCCCAAGGTAACCAAA 59.018 43.478 14.97 3.13 46.29 3.28
2623 3345 2.953453 AGGTTCCCAAGGTAACCAAAC 58.047 47.619 14.97 0.00 46.29 2.93
2624 3346 2.516702 AGGTTCCCAAGGTAACCAAACT 59.483 45.455 14.97 0.00 46.29 2.66
2625 3347 2.626266 GGTTCCCAAGGTAACCAAACTG 59.374 50.000 8.56 0.00 43.84 3.16
2626 3348 3.558033 GTTCCCAAGGTAACCAAACTGA 58.442 45.455 0.00 0.00 37.17 3.41
2627 3349 4.149598 GTTCCCAAGGTAACCAAACTGAT 58.850 43.478 0.00 0.00 37.17 2.90
2628 3350 3.761897 TCCCAAGGTAACCAAACTGATG 58.238 45.455 0.00 0.00 37.17 3.07
2629 3351 3.396276 TCCCAAGGTAACCAAACTGATGA 59.604 43.478 0.00 0.00 37.17 2.92
2630 3352 3.506067 CCCAAGGTAACCAAACTGATGAC 59.494 47.826 0.00 0.00 37.17 3.06
2631 3353 4.141287 CCAAGGTAACCAAACTGATGACA 58.859 43.478 0.00 0.00 37.17 3.58
2632 3354 4.766891 CCAAGGTAACCAAACTGATGACAT 59.233 41.667 0.00 0.00 37.17 3.06
2633 3355 5.943416 CCAAGGTAACCAAACTGATGACATA 59.057 40.000 0.00 0.00 37.17 2.29
2634 3356 6.603201 CCAAGGTAACCAAACTGATGACATAT 59.397 38.462 0.00 0.00 37.17 1.78
2635 3357 7.773224 CCAAGGTAACCAAACTGATGACATATA 59.227 37.037 0.00 0.00 37.17 0.86
2636 3358 9.173021 CAAGGTAACCAAACTGATGACATATAA 57.827 33.333 0.00 0.00 37.17 0.98
2637 3359 9.747898 AAGGTAACCAAACTGATGACATATAAA 57.252 29.630 0.00 0.00 37.17 1.40
2638 3360 9.920946 AGGTAACCAAACTGATGACATATAAAT 57.079 29.630 0.00 0.00 37.17 1.40
2639 3361 9.950680 GGTAACCAAACTGATGACATATAAATG 57.049 33.333 0.00 0.00 39.17 2.32
2697 3419 7.899648 AGTTGTATTGGCTAGAGTATACACT 57.100 36.000 7.97 7.97 34.28 3.55
2698 3420 8.307582 AGTTGTATTGGCTAGAGTATACACTT 57.692 34.615 8.17 0.00 34.28 3.16
2699 3421 8.414778 AGTTGTATTGGCTAGAGTATACACTTC 58.585 37.037 8.17 1.71 34.28 3.01
2700 3422 8.414778 GTTGTATTGGCTAGAGTATACACTTCT 58.585 37.037 8.17 3.48 34.28 2.85
2701 3423 9.636789 TTGTATTGGCTAGAGTATACACTTCTA 57.363 33.333 8.17 4.45 34.28 2.10
2702 3424 9.064706 TGTATTGGCTAGAGTATACACTTCTAC 57.935 37.037 8.17 3.53 34.21 2.59
2703 3425 9.064706 GTATTGGCTAGAGTATACACTTCTACA 57.935 37.037 8.17 1.37 34.21 2.74
2776 3499 5.827267 TCACATTTCAATCAGTCTGTTCCAA 59.173 36.000 0.00 0.00 0.00 3.53
2786 3509 4.037446 TCAGTCTGTTCCAAAATTTTCCGG 59.963 41.667 0.00 0.00 0.00 5.14
2803 3526 1.452801 GGTTTCTCCACCCCAACGA 59.547 57.895 0.00 0.00 35.97 3.85
2837 3561 7.308229 GGGAGAGCAGCAACAGTAAATATATTG 60.308 40.741 0.00 0.00 0.00 1.90
2892 3616 2.711009 TGGAAGACTGGACATTTCTGGT 59.289 45.455 0.00 0.00 0.00 4.00
2893 3617 3.907474 TGGAAGACTGGACATTTCTGGTA 59.093 43.478 0.00 0.00 0.00 3.25
2894 3618 4.349636 TGGAAGACTGGACATTTCTGGTAA 59.650 41.667 0.00 0.00 0.00 2.85
2896 3620 5.280011 GGAAGACTGGACATTTCTGGTAAGA 60.280 44.000 0.00 0.00 0.00 2.10
2897 3621 5.413309 AGACTGGACATTTCTGGTAAGAG 57.587 43.478 0.00 0.00 32.79 2.85
2899 3623 5.186797 AGACTGGACATTTCTGGTAAGAGAG 59.813 44.000 0.00 0.00 32.79 3.20
2900 3624 4.841246 ACTGGACATTTCTGGTAAGAGAGT 59.159 41.667 0.00 0.00 32.79 3.24
2902 3626 4.593206 TGGACATTTCTGGTAAGAGAGTGT 59.407 41.667 0.00 0.00 32.79 3.55
2903 3627 5.778241 TGGACATTTCTGGTAAGAGAGTGTA 59.222 40.000 0.00 0.00 32.79 2.90
2904 3628 6.071334 TGGACATTTCTGGTAAGAGAGTGTAG 60.071 42.308 0.00 0.00 32.79 2.74
2905 3629 6.071278 GGACATTTCTGGTAAGAGAGTGTAGT 60.071 42.308 0.00 0.00 32.79 2.73
2906 3630 7.122353 GGACATTTCTGGTAAGAGAGTGTAGTA 59.878 40.741 0.00 0.00 32.79 1.82
2907 3631 7.828712 ACATTTCTGGTAAGAGAGTGTAGTAC 58.171 38.462 0.00 0.00 32.79 2.73
2908 3632 7.450634 ACATTTCTGGTAAGAGAGTGTAGTACA 59.549 37.037 0.00 0.00 32.79 2.90
2909 3633 6.814506 TTCTGGTAAGAGAGTGTAGTACAC 57.185 41.667 23.31 23.31 40.52 2.90
2910 3634 6.301486 TTCTGGTAAGAGAGTGTAGTACACA 58.699 40.000 30.09 10.02 41.68 3.72
2911 3635 6.206243 TTCTGGTAAGAGAGTGTAGTACACAC 59.794 42.308 30.09 24.87 44.82 3.82
2912 3636 8.122824 TTCTGGTAAGAGAGTGTAGTACACACA 61.123 40.741 30.09 15.79 45.85 3.72
2937 3661 4.051922 CACTGAGTACACACTTCCAGAAC 58.948 47.826 0.00 0.00 34.21 3.01
2943 3667 6.266786 TGAGTACACACTTCCAGAACTATGAA 59.733 38.462 0.00 0.00 34.21 2.57
2964 3688 3.407424 TGCAGATTTCAGTAGCACACT 57.593 42.857 0.00 0.00 38.32 3.55
2965 3689 4.535526 TGCAGATTTCAGTAGCACACTA 57.464 40.909 0.00 0.00 34.98 2.74
2976 3700 7.933215 TCAGTAGCACACTATACTTCAACTA 57.067 36.000 0.00 0.00 34.98 2.24
3030 3754 8.939929 GGAGTACTTAATTACTTAACCCAACAC 58.060 37.037 6.91 0.00 32.17 3.32
3041 3765 0.393808 ACCCAACACTCGTGCAAACT 60.394 50.000 0.00 0.00 0.00 2.66
3042 3766 1.134340 ACCCAACACTCGTGCAAACTA 60.134 47.619 0.00 0.00 0.00 2.24
3043 3767 1.531149 CCCAACACTCGTGCAAACTAG 59.469 52.381 0.00 0.00 0.00 2.57
3233 3964 1.134788 CCCTTCATGTACGAGGTCACC 60.135 57.143 0.00 0.00 0.00 4.02
3609 4355 4.681025 GCATCTTCTCTTCTCATCATCGAC 59.319 45.833 0.00 0.00 0.00 4.20
3622 4368 4.390297 TCATCATCGACGTGATAGCTAGAG 59.610 45.833 0.00 0.00 36.72 2.43
3633 4379 0.827925 TAGCTAGAGGGACGGCCATG 60.828 60.000 11.00 0.00 35.15 3.66
3638 4384 4.415150 AGGGACGGCCATGTGCAG 62.415 66.667 11.00 6.63 43.89 4.41
3653 4399 0.462581 TGCAGGCAACGATCTGGATC 60.463 55.000 0.00 0.83 46.39 3.36
3655 4401 1.293924 CAGGCAACGATCTGGATCAC 58.706 55.000 10.62 0.00 46.39 3.06
3659 4405 1.203928 CAACGATCTGGATCACTCGC 58.796 55.000 10.62 0.00 37.69 5.03
3663 4409 1.334870 CGATCTGGATCACTCGCTCTG 60.335 57.143 10.62 0.00 37.69 3.35
3667 4413 3.760738 TCTGGATCACTCGCTCTGATAT 58.239 45.455 0.00 0.00 0.00 1.63
3690 4436 5.627802 TCGATTACGTACGTAGAGAAGTC 57.372 43.478 25.56 13.15 40.69 3.01
3694 4440 2.072298 ACGTACGTAGAGAAGTCGCTT 58.928 47.619 21.41 0.00 0.00 4.68
3696 4442 2.093310 CGTACGTAGAGAAGTCGCTTGA 59.907 50.000 7.22 0.00 0.00 3.02
3699 4451 4.959596 ACGTAGAGAAGTCGCTTGATAA 57.040 40.909 0.00 0.00 0.00 1.75
3704 4456 5.652994 AGAGAAGTCGCTTGATAAGTCTT 57.347 39.130 0.00 0.00 0.00 3.01
3720 4472 2.793232 AGTCTTGTTGCTCGTCGTTAAC 59.207 45.455 0.00 0.00 0.00 2.01
3730 4482 4.386652 TGCTCGTCGTTAACTTGATTTACC 59.613 41.667 3.71 0.00 0.00 2.85
3777 4561 8.335532 TGATTTATTTATGCATAGGTGTAGGC 57.664 34.615 6.50 0.00 36.45 3.93
3810 4594 8.184192 CCTGTGGTAGACTAATTAGCAATTTTG 58.816 37.037 12.54 0.00 31.12 2.44
3850 4634 9.869844 CAGATATAAATTACTTTACAGCTGTGC 57.130 33.333 29.57 0.00 34.57 4.57
3855 4639 7.979444 AAATTACTTTACAGCTGTGCTAGAA 57.021 32.000 29.57 16.99 36.40 2.10
3894 4678 7.666623 TCTTATATGCGGAAGTTCACATATGA 58.333 34.615 25.94 20.84 36.60 2.15
3912 4696 6.147821 ACATATGAAACACTGAACTAGCACAC 59.852 38.462 10.38 0.00 0.00 3.82
3965 4749 7.483307 CATGAAACAATAACAGGGTGATTAGG 58.517 38.462 0.00 0.00 0.00 2.69
3966 4750 6.785076 TGAAACAATAACAGGGTGATTAGGA 58.215 36.000 0.00 0.00 0.00 2.94
3972 4756 1.561542 ACAGGGTGATTAGGAGCCTTG 59.438 52.381 0.00 0.00 39.36 3.61
3975 4759 0.548510 GGTGATTAGGAGCCTTGGCT 59.451 55.000 14.69 14.69 0.00 4.75
3980 4764 3.265737 TGATTAGGAGCCTTGGCTGTTTA 59.734 43.478 19.84 5.68 0.00 2.01
3981 4765 4.079787 TGATTAGGAGCCTTGGCTGTTTAT 60.080 41.667 19.84 7.19 0.00 1.40
4017 4801 6.222389 TGGCATGTCAAAAACTCAATAAAGG 58.778 36.000 0.00 0.00 0.00 3.11
4039 4823 3.469564 GGGCACCGATGTAACATGA 57.530 52.632 0.00 0.00 40.86 3.07
4044 4828 2.935238 GCACCGATGTAACATGACCAGT 60.935 50.000 0.00 0.00 0.00 4.00
4045 4829 2.672874 CACCGATGTAACATGACCAGTG 59.327 50.000 0.00 0.00 0.00 3.66
4046 4830 2.279741 CCGATGTAACATGACCAGTGG 58.720 52.381 7.91 7.91 0.00 4.00
4047 4831 2.093711 CCGATGTAACATGACCAGTGGA 60.094 50.000 18.40 0.00 0.00 4.02
4048 4832 3.432186 CCGATGTAACATGACCAGTGGAT 60.432 47.826 18.40 0.00 0.00 3.41
4049 4833 3.804325 CGATGTAACATGACCAGTGGATC 59.196 47.826 18.40 10.38 0.00 3.36
4050 4834 3.627395 TGTAACATGACCAGTGGATCC 57.373 47.619 18.40 4.20 0.00 3.36
4051 4835 2.238646 TGTAACATGACCAGTGGATCCC 59.761 50.000 18.40 0.11 0.00 3.85
4052 4836 1.371467 AACATGACCAGTGGATCCCA 58.629 50.000 18.40 8.39 0.00 4.37
4053 4837 1.600058 ACATGACCAGTGGATCCCAT 58.400 50.000 18.40 10.34 35.28 4.00
4054 4838 1.213678 ACATGACCAGTGGATCCCATG 59.786 52.381 18.40 21.94 35.28 3.66
4055 4839 1.213678 CATGACCAGTGGATCCCATGT 59.786 52.381 18.40 0.79 35.28 3.21
4056 4840 2.262266 TGACCAGTGGATCCCATGTA 57.738 50.000 18.40 0.00 35.28 2.29
4057 4841 2.775418 TGACCAGTGGATCCCATGTAT 58.225 47.619 18.40 0.00 35.28 2.29
4062 4846 3.891366 CCAGTGGATCCCATGTATTTTCC 59.109 47.826 9.90 0.00 35.28 3.13
4110 4894 3.055094 GCCTCCACTCACTTGGATAAGAA 60.055 47.826 0.00 0.00 44.97 2.52
4115 4899 5.997746 TCCACTCACTTGGATAAGAACTTTG 59.002 40.000 0.00 0.00 41.00 2.77
4121 4905 6.426937 TCACTTGGATAAGAACTTTGCTACAC 59.573 38.462 0.00 0.00 37.36 2.90
4126 4910 6.439375 TGGATAAGAACTTTGCTACACCTAGA 59.561 38.462 0.00 0.00 0.00 2.43
4127 4911 6.981559 GGATAAGAACTTTGCTACACCTAGAG 59.018 42.308 0.00 0.00 0.00 2.43
4128 4912 7.147880 GGATAAGAACTTTGCTACACCTAGAGA 60.148 40.741 0.00 0.00 0.00 3.10
4129 4913 5.394224 AGAACTTTGCTACACCTAGAGAC 57.606 43.478 0.00 0.00 0.00 3.36
4130 4914 4.221041 AGAACTTTGCTACACCTAGAGACC 59.779 45.833 0.00 0.00 0.00 3.85
4131 4915 2.492484 ACTTTGCTACACCTAGAGACCG 59.508 50.000 0.00 0.00 0.00 4.79
4132 4916 2.502142 TTGCTACACCTAGAGACCGA 57.498 50.000 0.00 0.00 0.00 4.69
4133 4917 2.730934 TGCTACACCTAGAGACCGAT 57.269 50.000 0.00 0.00 0.00 4.18
4134 4918 2.573369 TGCTACACCTAGAGACCGATC 58.427 52.381 0.00 0.00 0.00 3.69
4135 4919 2.172930 TGCTACACCTAGAGACCGATCT 59.827 50.000 0.00 0.00 38.15 2.75
4136 4920 3.390311 TGCTACACCTAGAGACCGATCTA 59.610 47.826 0.00 0.00 34.34 1.98
4137 4921 3.747529 GCTACACCTAGAGACCGATCTAC 59.252 52.174 0.00 0.00 34.34 2.59
4138 4922 4.503643 GCTACACCTAGAGACCGATCTACT 60.504 50.000 0.00 0.00 34.34 2.57
4139 4923 5.279406 GCTACACCTAGAGACCGATCTACTA 60.279 48.000 0.00 0.00 34.34 1.82
4140 4924 4.959723 ACACCTAGAGACCGATCTACTAC 58.040 47.826 0.00 0.00 34.34 2.73
4141 4925 4.202346 ACACCTAGAGACCGATCTACTACC 60.202 50.000 0.00 0.00 34.34 3.18
4142 4926 3.327464 ACCTAGAGACCGATCTACTACCC 59.673 52.174 0.00 0.00 34.34 3.69
4143 4927 2.955342 AGAGACCGATCTACTACCCC 57.045 55.000 0.00 0.00 34.34 4.95
4144 4928 2.420705 AGAGACCGATCTACTACCCCT 58.579 52.381 0.00 0.00 34.34 4.79
4145 4929 3.596101 AGAGACCGATCTACTACCCCTA 58.404 50.000 0.00 0.00 34.34 3.53
4146 4930 3.979347 AGAGACCGATCTACTACCCCTAA 59.021 47.826 0.00 0.00 34.34 2.69
4147 4931 4.414846 AGAGACCGATCTACTACCCCTAAA 59.585 45.833 0.00 0.00 34.34 1.85
4148 4932 5.103771 AGAGACCGATCTACTACCCCTAAAA 60.104 44.000 0.00 0.00 34.34 1.52
4149 4933 5.522641 AGACCGATCTACTACCCCTAAAAA 58.477 41.667 0.00 0.00 31.46 1.94
4217 5009 1.340017 TGCGAAAGAGAAGGGAATGGG 60.340 52.381 0.00 0.00 0.00 4.00
4271 5063 4.148128 AGTGAGGATTAGCAAGTCCATG 57.852 45.455 4.43 0.00 36.96 3.66
4305 5097 0.545309 TCTCCAAGGGGACTCACCAG 60.545 60.000 0.00 0.00 42.68 4.00
4309 5101 1.279496 CAAGGGGACTCACCAGATCA 58.721 55.000 0.00 0.00 42.68 2.92
4358 5150 3.697166 GGGAACTTTCTAGGCATCCAAA 58.303 45.455 0.00 0.00 0.00 3.28
4405 5197 2.122768 GTCCAGACATCCAGAATCCCT 58.877 52.381 0.00 0.00 0.00 4.20
4406 5198 2.103941 GTCCAGACATCCAGAATCCCTC 59.896 54.545 0.00 0.00 0.00 4.30
4407 5199 1.069823 CCAGACATCCAGAATCCCTCG 59.930 57.143 0.00 0.00 0.00 4.63
4409 5201 1.062886 AGACATCCAGAATCCCTCGGA 60.063 52.381 0.00 0.00 35.55 4.55
4418 5210 1.772453 GAATCCCTCGGACCCCAAATA 59.228 52.381 0.00 0.00 32.98 1.40
4434 5226 0.326238 AATAGGTGGGAGCTTCGGGA 60.326 55.000 0.00 0.00 0.00 5.14
4453 5245 0.966920 AAACTCTGGACGTCGACCAT 59.033 50.000 16.63 0.00 36.79 3.55
4455 5247 0.894184 ACTCTGGACGTCGACCATGT 60.894 55.000 16.63 14.79 36.79 3.21
4456 5248 0.179161 CTCTGGACGTCGACCATGTC 60.179 60.000 16.63 11.50 40.01 3.06
4466 5258 3.553597 GACCATGTCGATCGGACTC 57.446 57.895 16.41 4.58 46.24 3.36
4467 5259 1.025812 GACCATGTCGATCGGACTCT 58.974 55.000 16.41 2.11 46.24 3.24
4468 5260 2.219458 GACCATGTCGATCGGACTCTA 58.781 52.381 16.41 0.00 46.24 2.43
4474 5266 1.741706 GTCGATCGGACTCTAACACCA 59.258 52.381 16.41 0.00 42.62 4.17
4483 5275 3.054361 GGACTCTAACACCAATGTCCCAT 60.054 47.826 0.00 0.00 38.45 4.00
4498 5290 2.509964 GTCCCATCTAAACCCCACTCAT 59.490 50.000 0.00 0.00 0.00 2.90
4503 5295 1.760613 TCTAAACCCCACTCATAGCCG 59.239 52.381 0.00 0.00 0.00 5.52
4504 5296 1.485066 CTAAACCCCACTCATAGCCGT 59.515 52.381 0.00 0.00 0.00 5.68
4513 5305 4.035208 CCCACTCATAGCCGTATTTTTCAC 59.965 45.833 0.00 0.00 0.00 3.18
4517 5309 7.011950 CCACTCATAGCCGTATTTTTCACAATA 59.988 37.037 0.00 0.00 0.00 1.90
4520 5312 9.950680 CTCATAGCCGTATTTTTCACAATAATT 57.049 29.630 0.00 0.00 0.00 1.40
4525 5317 6.695713 GCCGTATTTTTCACAATAATTCCCTC 59.304 38.462 0.00 0.00 0.00 4.30
4530 5322 3.838244 TCACAATAATTCCCTCCTCCG 57.162 47.619 0.00 0.00 0.00 4.63
4537 5329 0.325671 ATTCCCTCCTCCGCTCTCAA 60.326 55.000 0.00 0.00 0.00 3.02
4548 5340 1.558741 CGCTCTCAATCTCTGCTCAC 58.441 55.000 0.00 0.00 0.00 3.51
4550 5342 1.802136 GCTCTCAATCTCTGCTCACGG 60.802 57.143 0.00 0.00 0.00 4.94
4571 5363 4.508128 CCGCCACTGCCGTCGTAT 62.508 66.667 0.00 0.00 0.00 3.06
4573 5365 1.007734 CGCCACTGCCGTCGTATAT 60.008 57.895 0.00 0.00 0.00 0.86
4574 5366 0.239082 CGCCACTGCCGTCGTATATA 59.761 55.000 0.00 0.00 0.00 0.86
4575 5367 1.135489 CGCCACTGCCGTCGTATATAT 60.135 52.381 0.00 0.00 0.00 0.86
4576 5368 2.096335 CGCCACTGCCGTCGTATATATA 59.904 50.000 0.00 0.00 0.00 0.86
4577 5369 3.692576 GCCACTGCCGTCGTATATATAG 58.307 50.000 0.00 0.00 0.00 1.31
4578 5370 3.376234 GCCACTGCCGTCGTATATATAGA 59.624 47.826 0.00 0.00 0.00 1.98
4579 5371 4.730035 GCCACTGCCGTCGTATATATAGAC 60.730 50.000 9.84 9.84 0.00 2.59
4580 5372 4.634883 CCACTGCCGTCGTATATATAGACT 59.365 45.833 15.01 0.00 33.10 3.24
4586 5378 4.574013 CCGTCGTATATATAGACTCCCCAC 59.426 50.000 15.01 0.00 33.10 4.61
4587 5379 5.181009 CGTCGTATATATAGACTCCCCACA 58.819 45.833 15.01 0.00 33.10 4.17
4588 5380 5.821470 CGTCGTATATATAGACTCCCCACAT 59.179 44.000 15.01 0.00 33.10 3.21
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 6.759356 ACTAGTAATAATGTACGTGCAATGCA 59.241 34.615 11.22 2.72 35.60 3.96
14 15 7.173863 ACTAGTAATAATGTACGTGCAATGC 57.826 36.000 11.22 0.00 0.00 3.56
18 19 9.897744 GGTATAACTAGTAATAATGTACGTGCA 57.102 33.333 9.28 9.28 0.00 4.57
19 20 9.897744 TGGTATAACTAGTAATAATGTACGTGC 57.102 33.333 0.00 0.00 0.00 5.34
33 34 9.847224 CACTTAATCCCATTTGGTATAACTAGT 57.153 33.333 0.00 0.00 34.77 2.57
34 35 9.847224 ACACTTAATCCCATTTGGTATAACTAG 57.153 33.333 0.00 0.00 34.77 2.57
35 36 9.621629 CACACTTAATCCCATTTGGTATAACTA 57.378 33.333 0.00 0.00 34.77 2.24
36 37 7.559897 CCACACTTAATCCCATTTGGTATAACT 59.440 37.037 0.00 0.00 34.77 2.24
37 38 7.201875 CCCACACTTAATCCCATTTGGTATAAC 60.202 40.741 0.00 0.00 34.77 1.89
41 42 4.044825 ACCCACACTTAATCCCATTTGGTA 59.955 41.667 0.00 0.00 34.77 3.25
63 64 6.275335 CAACATACAAATGGAATGGGATGAC 58.725 40.000 0.00 0.00 37.43 3.06
66 67 4.715792 TGCAACATACAAATGGAATGGGAT 59.284 37.500 0.00 0.00 37.43 3.85
88 89 2.821378 TCAACATGCATGGGAGAAACTG 59.179 45.455 29.41 12.97 0.00 3.16
94 95 4.098807 TGAAATCATCAACATGCATGGGAG 59.901 41.667 29.41 18.22 34.30 4.30
95 96 4.024670 TGAAATCATCAACATGCATGGGA 58.975 39.130 29.41 24.76 34.30 4.37
96 97 4.394439 TGAAATCATCAACATGCATGGG 57.606 40.909 29.41 20.66 34.30 4.00
99 100 6.097696 TCTGGAATGAAATCATCAACATGCAT 59.902 34.615 0.00 0.00 42.54 3.96
100 101 5.419471 TCTGGAATGAAATCATCAACATGCA 59.581 36.000 0.00 0.00 42.54 3.96
101 102 5.898174 TCTGGAATGAAATCATCAACATGC 58.102 37.500 0.00 0.00 42.54 4.06
123 124 7.381139 TGTTTTCAATTCGGTCAGCTTATTTTC 59.619 33.333 0.00 0.00 0.00 2.29
151 152 3.708210 CCAGGTTCTAGGCACGGA 58.292 61.111 0.00 0.00 0.00 4.69
169 170 0.327924 TGATGTACCTGGGTGGCAAG 59.672 55.000 2.07 0.00 40.22 4.01
209 210 4.180057 TCATGAAAAGCAAACCACACAAC 58.820 39.130 0.00 0.00 0.00 3.32
276 277 4.718961 AGTGACAGCTATGGAAACTGTTT 58.281 39.130 5.29 5.29 44.40 2.83
279 280 5.349817 CAGTAAGTGACAGCTATGGAAACTG 59.650 44.000 0.00 0.00 37.45 3.16
318 321 3.704566 ACAACAGGTACACAGACTTGAGA 59.295 43.478 0.00 0.00 31.24 3.27
428 431 7.361201 CCAACACCAGACTGATAACATAAGTTG 60.361 40.741 3.32 0.00 38.69 3.16
434 437 4.640771 ACCAACACCAGACTGATAACAT 57.359 40.909 3.32 0.00 0.00 2.71
518 521 3.782046 ACGACAACACCACTAGCATATC 58.218 45.455 0.00 0.00 0.00 1.63
523 526 0.032952 TGGACGACAACACCACTAGC 59.967 55.000 0.00 0.00 0.00 3.42
541 544 1.209128 AAAAGACTGACTGACGCGTG 58.791 50.000 20.70 5.54 0.00 5.34
542 545 1.935933 AAAAAGACTGACTGACGCGT 58.064 45.000 13.85 13.85 0.00 6.01
547 550 4.260620 GCGCAAACTAAAAAGACTGACTGA 60.261 41.667 0.30 0.00 0.00 3.41
710 714 1.894466 CTTGCATGGTTTGGGTCATGA 59.106 47.619 7.40 0.00 42.25 3.07
764 769 7.803279 ATTTACTACTAGCTTAATGTTGGCC 57.197 36.000 0.00 0.00 0.00 5.36
841 850 2.334838 CACGTACTTGGTTAGCAGACC 58.665 52.381 1.80 1.80 40.23 3.85
911 927 3.610040 TGTACGGGTAGAGACGAGTTA 57.390 47.619 0.00 0.00 0.00 2.24
912 928 2.479566 TGTACGGGTAGAGACGAGTT 57.520 50.000 0.00 0.00 0.00 3.01
924 940 2.098233 GTGTCACGGCATGTACGGG 61.098 63.158 14.68 11.41 35.74 5.28
925 941 0.946700 TTGTGTCACGGCATGTACGG 60.947 55.000 14.68 5.77 35.23 4.02
953 981 0.846693 AGGTTGAGAGCAAAGTGGGT 59.153 50.000 0.00 0.00 35.42 4.51
955 983 1.151668 CGAGGTTGAGAGCAAAGTGG 58.848 55.000 0.00 0.00 35.42 4.00
1026 1054 2.112297 GGTGCAAACGGAGGACCA 59.888 61.111 9.23 0.00 45.66 4.02
1047 1085 2.336809 CGATCCAGGTAGCCGAGC 59.663 66.667 0.00 0.00 0.00 5.03
1070 1113 1.224722 GATCGCGATGCCTTCCCTTC 61.225 60.000 29.09 4.59 0.00 3.46
1258 1304 2.027073 CGCCGTAGTTCTGCAGCAA 61.027 57.895 9.47 1.36 0.00 3.91
1398 1444 0.917533 ATGGCTCCAGCAGATGAGTT 59.082 50.000 0.03 0.00 44.36 3.01
1401 1447 0.182061 GGAATGGCTCCAGCAGATGA 59.818 55.000 0.03 0.00 44.67 2.92
1645 1718 0.397564 GACGTGGTAAAAGGTCCCCA 59.602 55.000 0.00 0.00 0.00 4.96
1670 1743 0.321034 GGGGCTACGAAAGTTTCCGT 60.321 55.000 10.01 12.67 46.40 4.69
1833 1918 5.768662 CCTCACCGAGTCTTATACTAATCCA 59.231 44.000 0.00 0.00 39.07 3.41
1834 1919 6.002704 TCCTCACCGAGTCTTATACTAATCC 58.997 44.000 0.00 0.00 39.07 3.01
1870 2232 9.659830 GTAAAGAATTTTCACAACACGACTAAT 57.340 29.630 0.00 0.00 40.09 1.73
1871 2233 8.885722 AGTAAAGAATTTTCACAACACGACTAA 58.114 29.630 0.00 0.00 40.09 2.24
1872 2234 8.428186 AGTAAAGAATTTTCACAACACGACTA 57.572 30.769 0.00 0.00 40.09 2.59
1873 2235 7.065324 TGAGTAAAGAATTTTCACAACACGACT 59.935 33.333 0.00 0.00 40.09 4.18
1874 2236 7.163682 GTGAGTAAAGAATTTTCACAACACGAC 59.836 37.037 0.00 0.00 40.09 4.34
1875 2237 7.148390 TGTGAGTAAAGAATTTTCACAACACGA 60.148 33.333 3.38 0.00 40.09 4.35
1876 2238 6.964370 TGTGAGTAAAGAATTTTCACAACACG 59.036 34.615 3.38 0.00 40.09 4.49
1877 2239 8.181573 TCTGTGAGTAAAGAATTTTCACAACAC 58.818 33.333 7.00 0.00 40.09 3.32
1878 2240 8.275015 TCTGTGAGTAAAGAATTTTCACAACA 57.725 30.769 7.00 0.00 40.09 3.33
1879 2241 7.857885 CCTCTGTGAGTAAAGAATTTTCACAAC 59.142 37.037 7.00 0.00 40.09 3.32
1880 2242 7.556275 ACCTCTGTGAGTAAAGAATTTTCACAA 59.444 33.333 7.00 0.00 40.09 3.33
1881 2243 7.054124 ACCTCTGTGAGTAAAGAATTTTCACA 58.946 34.615 5.62 5.62 40.09 3.58
1882 2244 7.497925 ACCTCTGTGAGTAAAGAATTTTCAC 57.502 36.000 0.00 0.00 40.09 3.18
1883 2245 9.793259 ATAACCTCTGTGAGTAAAGAATTTTCA 57.207 29.630 0.00 0.00 40.09 2.69
1886 2248 9.367444 CGTATAACCTCTGTGAGTAAAGAATTT 57.633 33.333 0.00 0.00 43.42 1.82
1887 2249 7.980099 CCGTATAACCTCTGTGAGTAAAGAATT 59.020 37.037 0.00 0.00 0.00 2.17
1888 2250 7.417570 CCCGTATAACCTCTGTGAGTAAAGAAT 60.418 40.741 0.00 0.00 0.00 2.40
1889 2251 6.127535 CCCGTATAACCTCTGTGAGTAAAGAA 60.128 42.308 0.00 0.00 0.00 2.52
1890 2252 5.359009 CCCGTATAACCTCTGTGAGTAAAGA 59.641 44.000 0.00 0.00 0.00 2.52
1891 2253 5.451520 CCCCGTATAACCTCTGTGAGTAAAG 60.452 48.000 0.00 0.00 0.00 1.85
1892 2254 4.403432 CCCCGTATAACCTCTGTGAGTAAA 59.597 45.833 0.00 0.00 0.00 2.01
1893 2255 3.956199 CCCCGTATAACCTCTGTGAGTAA 59.044 47.826 0.00 0.00 0.00 2.24
1894 2256 3.053395 ACCCCGTATAACCTCTGTGAGTA 60.053 47.826 0.00 0.00 0.00 2.59
1895 2257 2.292061 ACCCCGTATAACCTCTGTGAGT 60.292 50.000 0.00 0.00 0.00 3.41
1896 2258 2.385803 ACCCCGTATAACCTCTGTGAG 58.614 52.381 0.00 0.00 0.00 3.51
1897 2259 2.537633 ACCCCGTATAACCTCTGTGA 57.462 50.000 0.00 0.00 0.00 3.58
1898 2260 4.950205 AATACCCCGTATAACCTCTGTG 57.050 45.455 0.00 0.00 0.00 3.66
1899 2261 5.664457 AGAAAATACCCCGTATAACCTCTGT 59.336 40.000 0.00 0.00 0.00 3.41
1900 2262 6.170846 AGAAAATACCCCGTATAACCTCTG 57.829 41.667 0.00 0.00 0.00 3.35
1901 2263 7.566509 AGTTAGAAAATACCCCGTATAACCTCT 59.433 37.037 0.00 0.00 0.00 3.69
1902 2264 7.730084 AGTTAGAAAATACCCCGTATAACCTC 58.270 38.462 0.00 0.00 0.00 3.85
1903 2265 7.681259 AGTTAGAAAATACCCCGTATAACCT 57.319 36.000 0.00 0.00 0.00 3.50
1908 2270 9.939802 GATGATTAGTTAGAAAATACCCCGTAT 57.060 33.333 0.00 0.00 0.00 3.06
1909 2271 9.151177 AGATGATTAGTTAGAAAATACCCCGTA 57.849 33.333 0.00 0.00 0.00 4.02
1910 2272 8.030913 AGATGATTAGTTAGAAAATACCCCGT 57.969 34.615 0.00 0.00 0.00 5.28
1911 2273 8.904099 AAGATGATTAGTTAGAAAATACCCCG 57.096 34.615 0.00 0.00 0.00 5.73
1918 2280 8.491958 GGGGGTAGAAGATGATTAGTTAGAAAA 58.508 37.037 0.00 0.00 0.00 2.29
1919 2281 8.030913 GGGGGTAGAAGATGATTAGTTAGAAA 57.969 38.462 0.00 0.00 0.00 2.52
1920 2282 7.613551 GGGGGTAGAAGATGATTAGTTAGAA 57.386 40.000 0.00 0.00 0.00 2.10
1960 2322 0.910088 AGTAAGGTGAGGGCTCCCAC 60.910 60.000 7.82 1.17 38.92 4.61
1961 2323 0.909610 CAGTAAGGTGAGGGCTCCCA 60.910 60.000 7.82 0.00 38.92 4.37
1962 2324 1.908483 CAGTAAGGTGAGGGCTCCC 59.092 63.158 0.00 0.00 0.00 4.30
1963 2325 1.222113 GCAGTAAGGTGAGGGCTCC 59.778 63.158 0.00 0.00 0.00 4.70
1964 2326 1.486211 TAGCAGTAAGGTGAGGGCTC 58.514 55.000 0.00 0.00 33.10 4.70
1965 2327 2.043227 GATAGCAGTAAGGTGAGGGCT 58.957 52.381 0.00 0.00 35.50 5.19
1966 2328 1.070914 GGATAGCAGTAAGGTGAGGGC 59.929 57.143 0.00 0.00 0.00 5.19
1967 2329 2.398588 TGGATAGCAGTAAGGTGAGGG 58.601 52.381 0.00 0.00 0.00 4.30
1968 2330 4.696479 ATTGGATAGCAGTAAGGTGAGG 57.304 45.455 0.00 0.00 0.00 3.86
1969 2331 8.398665 GTTTTTATTGGATAGCAGTAAGGTGAG 58.601 37.037 0.00 0.00 0.00 3.51
1970 2332 7.885922 TGTTTTTATTGGATAGCAGTAAGGTGA 59.114 33.333 0.00 0.00 0.00 4.02
1971 2333 8.050778 TGTTTTTATTGGATAGCAGTAAGGTG 57.949 34.615 0.00 0.00 0.00 4.00
1972 2334 8.686334 CATGTTTTTATTGGATAGCAGTAAGGT 58.314 33.333 0.00 0.00 0.00 3.50
1973 2335 7.649306 GCATGTTTTTATTGGATAGCAGTAAGG 59.351 37.037 0.00 0.00 0.00 2.69
1974 2336 7.649306 GGCATGTTTTTATTGGATAGCAGTAAG 59.351 37.037 0.00 0.00 0.00 2.34
1975 2337 7.123397 TGGCATGTTTTTATTGGATAGCAGTAA 59.877 33.333 0.00 0.00 0.00 2.24
1976 2338 6.605194 TGGCATGTTTTTATTGGATAGCAGTA 59.395 34.615 0.00 0.00 0.00 2.74
1977 2339 5.421693 TGGCATGTTTTTATTGGATAGCAGT 59.578 36.000 0.00 0.00 0.00 4.40
1978 2340 5.904941 TGGCATGTTTTTATTGGATAGCAG 58.095 37.500 0.00 0.00 0.00 4.24
1979 2341 5.929058 TGGCATGTTTTTATTGGATAGCA 57.071 34.783 0.00 0.00 0.00 3.49
1980 2342 6.105333 TGTTGGCATGTTTTTATTGGATAGC 58.895 36.000 0.00 0.00 0.00 2.97
1981 2343 8.545229 TTTGTTGGCATGTTTTTATTGGATAG 57.455 30.769 0.00 0.00 0.00 2.08
1982 2344 8.778358 GTTTTGTTGGCATGTTTTTATTGGATA 58.222 29.630 0.00 0.00 0.00 2.59
1983 2345 7.255416 GGTTTTGTTGGCATGTTTTTATTGGAT 60.255 33.333 0.00 0.00 0.00 3.41
1984 2346 6.038714 GGTTTTGTTGGCATGTTTTTATTGGA 59.961 34.615 0.00 0.00 0.00 3.53
1985 2347 6.183360 TGGTTTTGTTGGCATGTTTTTATTGG 60.183 34.615 0.00 0.00 0.00 3.16
1986 2348 6.690528 GTGGTTTTGTTGGCATGTTTTTATTG 59.309 34.615 0.00 0.00 0.00 1.90
1987 2349 6.601217 AGTGGTTTTGTTGGCATGTTTTTATT 59.399 30.769 0.00 0.00 0.00 1.40
1988 2350 6.118852 AGTGGTTTTGTTGGCATGTTTTTAT 58.881 32.000 0.00 0.00 0.00 1.40
1989 2351 5.491982 AGTGGTTTTGTTGGCATGTTTTTA 58.508 33.333 0.00 0.00 0.00 1.52
1990 2352 4.331108 AGTGGTTTTGTTGGCATGTTTTT 58.669 34.783 0.00 0.00 0.00 1.94
1991 2353 3.938334 GAGTGGTTTTGTTGGCATGTTTT 59.062 39.130 0.00 0.00 0.00 2.43
1992 2354 3.530535 GAGTGGTTTTGTTGGCATGTTT 58.469 40.909 0.00 0.00 0.00 2.83
1993 2355 2.158971 GGAGTGGTTTTGTTGGCATGTT 60.159 45.455 0.00 0.00 0.00 2.71
1994 2356 1.412343 GGAGTGGTTTTGTTGGCATGT 59.588 47.619 0.00 0.00 0.00 3.21
1995 2357 1.602668 CGGAGTGGTTTTGTTGGCATG 60.603 52.381 0.00 0.00 0.00 4.06
1996 2358 0.673437 CGGAGTGGTTTTGTTGGCAT 59.327 50.000 0.00 0.00 0.00 4.40
1997 2359 0.681564 ACGGAGTGGTTTTGTTGGCA 60.682 50.000 0.00 0.00 42.51 4.92
1998 2360 0.458260 AACGGAGTGGTTTTGTTGGC 59.542 50.000 0.00 0.00 45.00 4.52
1999 2361 1.746220 TCAACGGAGTGGTTTTGTTGG 59.254 47.619 3.86 0.00 45.00 3.77
2000 2362 3.550030 GGATCAACGGAGTGGTTTTGTTG 60.550 47.826 0.00 0.00 45.00 3.33
2001 2363 2.621526 GGATCAACGGAGTGGTTTTGTT 59.378 45.455 0.00 0.00 45.00 2.83
2002 2364 2.227194 GGATCAACGGAGTGGTTTTGT 58.773 47.619 0.00 0.00 45.00 2.83
2003 2365 1.539827 GGGATCAACGGAGTGGTTTTG 59.460 52.381 0.00 0.00 45.00 2.44
2004 2366 1.880646 CGGGATCAACGGAGTGGTTTT 60.881 52.381 0.00 0.00 45.00 2.43
2005 2367 0.321298 CGGGATCAACGGAGTGGTTT 60.321 55.000 0.00 0.00 45.00 3.27
2006 2368 1.295423 CGGGATCAACGGAGTGGTT 59.705 57.895 0.00 0.00 45.00 3.67
2007 2369 0.612732 TACGGGATCAACGGAGTGGT 60.613 55.000 12.69 0.00 45.00 4.16
2008 2370 0.533491 TTACGGGATCAACGGAGTGG 59.467 55.000 12.69 0.00 45.00 4.00
2009 2371 2.373540 TTTACGGGATCAACGGAGTG 57.626 50.000 12.69 0.00 45.00 3.51
2027 2389 3.443329 TGCTACACGCATGGATGATTTTT 59.557 39.130 0.00 0.00 45.47 1.94
2028 2390 3.016031 TGCTACACGCATGGATGATTTT 58.984 40.909 0.00 0.00 45.47 1.82
2029 2391 2.642427 TGCTACACGCATGGATGATTT 58.358 42.857 0.00 0.00 45.47 2.17
2030 2392 2.330440 TGCTACACGCATGGATGATT 57.670 45.000 0.00 0.00 45.47 2.57
2040 2402 1.345176 GACGAGCAATGCTACACGC 59.655 57.895 8.12 0.87 39.88 5.34
2041 2403 1.071019 ACGACGAGCAATGCTACACG 61.071 55.000 8.12 15.72 39.88 4.49
2042 2404 0.366871 CACGACGAGCAATGCTACAC 59.633 55.000 8.12 1.23 39.88 2.90
2043 2405 0.038618 ACACGACGAGCAATGCTACA 60.039 50.000 8.12 0.00 39.88 2.74
2044 2406 1.068474 AACACGACGAGCAATGCTAC 58.932 50.000 8.12 2.00 39.88 3.58
2045 2407 1.067693 CAACACGACGAGCAATGCTA 58.932 50.000 8.12 0.00 39.88 3.49
2046 2408 0.880278 ACAACACGACGAGCAATGCT 60.880 50.000 7.79 7.79 43.88 3.79
2047 2409 0.041312 AACAACACGACGAGCAATGC 60.041 50.000 0.00 0.00 0.00 3.56
2048 2410 2.036217 CAAACAACACGACGAGCAATG 58.964 47.619 0.00 0.00 0.00 2.82
2049 2411 1.668751 ACAAACAACACGACGAGCAAT 59.331 42.857 0.00 0.00 0.00 3.56
2050 2412 1.080298 ACAAACAACACGACGAGCAA 58.920 45.000 0.00 0.00 0.00 3.91
2051 2413 1.061421 GAACAAACAACACGACGAGCA 59.939 47.619 0.00 0.00 0.00 4.26
2052 2414 1.326548 AGAACAAACAACACGACGAGC 59.673 47.619 0.00 0.00 0.00 5.03
2053 2415 3.543460 GGAAGAACAAACAACACGACGAG 60.543 47.826 0.00 0.00 0.00 4.18
2054 2416 2.349275 GGAAGAACAAACAACACGACGA 59.651 45.455 0.00 0.00 0.00 4.20
2055 2417 2.350498 AGGAAGAACAAACAACACGACG 59.650 45.455 0.00 0.00 0.00 5.12
2065 2427 5.126869 TGATTTCAAGCACAGGAAGAACAAA 59.873 36.000 0.00 0.00 0.00 2.83
2066 2428 4.644234 TGATTTCAAGCACAGGAAGAACAA 59.356 37.500 0.00 0.00 0.00 2.83
2068 2430 4.836125 TGATTTCAAGCACAGGAAGAAC 57.164 40.909 0.00 0.00 0.00 3.01
2084 2446 2.159841 CGACTGACGCGTGAAATGATTT 60.160 45.455 20.70 0.00 34.51 2.17
2085 2447 1.390123 CGACTGACGCGTGAAATGATT 59.610 47.619 20.70 0.00 34.51 2.57
2086 2448 0.992072 CGACTGACGCGTGAAATGAT 59.008 50.000 20.70 0.00 34.51 2.45
2089 2451 1.710013 ATTCGACTGACGCGTGAAAT 58.290 45.000 20.70 1.03 42.26 2.17
2101 2569 1.202580 GGAGGCTGCACATATTCGACT 60.203 52.381 0.00 0.00 0.00 4.18
2127 2595 2.556792 CGTGCGAGTGTCGTCTCT 59.443 61.111 0.00 0.00 42.81 3.10
2133 2601 2.881352 GCTAGCCGTGCGAGTGTC 60.881 66.667 2.29 0.00 33.92 3.67
2134 2602 3.680786 TGCTAGCCGTGCGAGTGT 61.681 61.111 13.29 0.00 33.92 3.55
2136 2604 4.436998 GGTGCTAGCCGTGCGAGT 62.437 66.667 13.29 0.00 33.92 4.18
2138 2606 4.435436 CTGGTGCTAGCCGTGCGA 62.435 66.667 13.29 0.00 0.00 5.10
2141 2609 4.435436 TCGCTGGTGCTAGCCGTG 62.435 66.667 13.29 5.04 40.59 4.94
2143 2611 3.356639 TTCTCGCTGGTGCTAGCCG 62.357 63.158 13.29 8.17 40.59 5.52
2147 2615 0.037326 CCAACTTCTCGCTGGTGCTA 60.037 55.000 0.00 0.00 36.97 3.49
2152 2620 1.372087 GCATCCCAACTTCTCGCTGG 61.372 60.000 0.00 0.00 0.00 4.85
2153 2621 1.372087 GGCATCCCAACTTCTCGCTG 61.372 60.000 0.00 0.00 0.00 5.18
2154 2622 1.078143 GGCATCCCAACTTCTCGCT 60.078 57.895 0.00 0.00 0.00 4.93
2156 2624 1.815421 CCGGCATCCCAACTTCTCG 60.815 63.158 0.00 0.00 0.00 4.04
2173 2641 4.742201 TCAACGCTCAGCCTCGCC 62.742 66.667 0.00 0.00 0.00 5.54
2175 2643 2.097038 CCTTCAACGCTCAGCCTCG 61.097 63.158 0.00 0.00 0.00 4.63
2181 2649 1.347707 ACCTGAATCCTTCAACGCTCA 59.652 47.619 0.00 0.00 39.58 4.26
2191 2733 2.482494 CCTCCAAGGTACCTGAATCCT 58.518 52.381 17.14 0.00 0.00 3.24
2202 2744 2.125225 GACCTCCCCCTCCAAGGT 59.875 66.667 0.00 0.00 46.03 3.50
2203 2745 2.124996 TGACCTCCCCCTCCAAGG 59.875 66.667 0.00 0.00 36.21 3.61
2204 2746 1.229658 AGTGACCTCCCCCTCCAAG 60.230 63.158 0.00 0.00 0.00 3.61
2205 2747 1.538876 CAGTGACCTCCCCCTCCAA 60.539 63.158 0.00 0.00 0.00 3.53
2206 2748 2.122729 CAGTGACCTCCCCCTCCA 59.877 66.667 0.00 0.00 0.00 3.86
2207 2749 1.990614 GTCAGTGACCTCCCCCTCC 60.991 68.421 12.54 0.00 0.00 4.30
2209 2751 2.283966 CGTCAGTGACCTCCCCCT 60.284 66.667 17.57 0.00 0.00 4.79
2213 2755 0.387929 TGTTGTCGTCAGTGACCTCC 59.612 55.000 17.57 6.16 38.11 4.30
2215 2757 1.686587 TGATGTTGTCGTCAGTGACCT 59.313 47.619 17.57 0.00 38.11 3.85
2229 2771 3.104512 TCTCTAACCCCGACATGATGTT 58.895 45.455 0.00 0.00 0.00 2.71
2230 2772 2.747177 TCTCTAACCCCGACATGATGT 58.253 47.619 0.00 0.00 0.00 3.06
2231 2773 3.819564 TTCTCTAACCCCGACATGATG 57.180 47.619 0.00 0.00 0.00 3.07
2250 2792 4.029809 CGACCCGCCCTCCCTTTT 62.030 66.667 0.00 0.00 0.00 2.27
2276 2890 5.504853 GATCTTCTTCTTCCCCTTCAACAT 58.495 41.667 0.00 0.00 0.00 2.71
2284 2898 1.555533 ACCACGATCTTCTTCTTCCCC 59.444 52.381 0.00 0.00 0.00 4.81
2296 2911 3.248602 GCAATATCCAACAGACCACGATC 59.751 47.826 0.00 0.00 0.00 3.69
2298 2913 2.627945 GCAATATCCAACAGACCACGA 58.372 47.619 0.00 0.00 0.00 4.35
2346 2966 1.372997 CGGCTATCGAACATCGGGG 60.373 63.158 0.00 0.00 40.88 5.73
2347 2967 1.658114 TCGGCTATCGAACATCGGG 59.342 57.895 0.00 0.00 45.86 5.14
2357 2977 0.976641 TCATCATGGGGTCGGCTATC 59.023 55.000 0.00 0.00 0.00 2.08
2369 2989 5.212532 AGCTAGCTAGGTCTTTCATCATG 57.787 43.478 17.69 0.00 0.00 3.07
2372 2992 6.399639 AACTAGCTAGCTAGGTCTTTCATC 57.600 41.667 40.94 4.99 42.39 2.92
2403 3051 7.768240 AGGAAACTCAAACGACTTAACATTTT 58.232 30.769 0.00 0.00 32.90 1.82
2410 3059 6.645790 AGTCTAGGAAACTCAAACGACTTA 57.354 37.500 0.00 0.00 43.67 2.24
2413 3062 6.011476 AGTAGTCTAGGAAACTCAAACGAC 57.989 41.667 0.00 0.00 43.67 4.34
2415 3064 8.983307 AATTAGTAGTCTAGGAAACTCAAACG 57.017 34.615 0.00 0.00 43.67 3.60
2533 3255 1.361668 CCGGTGGAAGCTCGATGTTG 61.362 60.000 0.00 0.00 0.00 3.33
2538 3260 3.744719 CGTCCGGTGGAAGCTCGA 61.745 66.667 0.00 0.00 31.38 4.04
2560 3282 1.276820 CGTACTTGCGCCACGTGTAA 61.277 55.000 15.65 3.42 0.00 2.41
2671 3393 9.417561 AGTGTATACTCTAGCCAATACAACTAA 57.582 33.333 5.66 0.00 36.77 2.24
2672 3394 8.991783 AGTGTATACTCTAGCCAATACAACTA 57.008 34.615 5.66 0.00 36.77 2.24
2673 3395 7.899648 AGTGTATACTCTAGCCAATACAACT 57.100 36.000 5.66 8.57 36.77 3.16
2674 3396 8.414778 AGAAGTGTATACTCTAGCCAATACAAC 58.585 37.037 7.83 7.17 36.77 3.32
2675 3397 8.534954 AGAAGTGTATACTCTAGCCAATACAA 57.465 34.615 7.83 0.00 36.77 2.41
2676 3398 9.064706 GTAGAAGTGTATACTCTAGCCAATACA 57.935 37.037 7.83 6.73 35.69 2.29
2677 3399 9.064706 TGTAGAAGTGTATACTCTAGCCAATAC 57.935 37.037 7.83 6.21 35.69 1.89
2678 3400 9.064706 GTGTAGAAGTGTATACTCTAGCCAATA 57.935 37.037 7.83 0.00 35.69 1.90
2679 3401 7.560262 TGTGTAGAAGTGTATACTCTAGCCAAT 59.440 37.037 7.83 0.00 35.69 3.16
2680 3402 6.888088 TGTGTAGAAGTGTATACTCTAGCCAA 59.112 38.462 7.83 0.00 35.69 4.52
2681 3403 6.420638 TGTGTAGAAGTGTATACTCTAGCCA 58.579 40.000 7.83 2.67 35.69 4.75
2682 3404 6.939132 TGTGTAGAAGTGTATACTCTAGCC 57.061 41.667 7.83 1.91 35.69 3.93
2725 3447 1.978455 AATTGGCCCCGCATAGACGA 61.978 55.000 0.00 0.00 34.06 4.20
2734 3456 0.740737 GAATCAGTCAATTGGCCCCG 59.259 55.000 6.39 0.00 0.00 5.73
2768 3491 5.356426 AGAAACCGGAAAATTTTGGAACAG 58.644 37.500 9.46 0.00 42.39 3.16
2776 3499 2.631062 GGGTGGAGAAACCGGAAAATTT 59.369 45.455 9.46 0.00 41.52 1.82
2786 3509 1.905637 AATCGTTGGGGTGGAGAAAC 58.094 50.000 0.00 0.00 0.00 2.78
2803 3526 0.613260 TGCTGCTCTCCCAACGTAAT 59.387 50.000 0.00 0.00 0.00 1.89
2900 3624 4.204799 ACTCAGTGACTGTGTGTACTACA 58.795 43.478 18.28 0.00 36.93 2.74
2902 3626 5.237996 GTGTACTCAGTGACTGTGTGTACTA 59.762 44.000 25.40 16.30 38.42 1.82
2903 3627 4.036498 GTGTACTCAGTGACTGTGTGTACT 59.964 45.833 25.40 5.46 38.42 2.73
2904 3628 4.201980 TGTGTACTCAGTGACTGTGTGTAC 60.202 45.833 25.40 24.68 38.42 2.90
2905 3629 3.949113 TGTGTACTCAGTGACTGTGTGTA 59.051 43.478 25.40 17.13 38.42 2.90
2906 3630 2.758423 TGTGTACTCAGTGACTGTGTGT 59.242 45.455 25.40 17.96 38.42 3.72
2907 3631 3.116300 GTGTGTACTCAGTGACTGTGTG 58.884 50.000 25.40 13.87 38.42 3.82
2908 3632 3.024547 AGTGTGTACTCAGTGACTGTGT 58.975 45.455 21.82 21.82 40.54 3.72
2909 3633 3.717400 AGTGTGTACTCAGTGACTGTG 57.283 47.619 12.93 12.76 28.79 3.66
2910 3634 3.068307 GGAAGTGTGTACTCAGTGACTGT 59.932 47.826 12.93 0.00 35.69 3.55
2911 3635 3.068165 TGGAAGTGTGTACTCAGTGACTG 59.932 47.826 6.18 6.18 35.69 3.51
2912 3636 3.296854 TGGAAGTGTGTACTCAGTGACT 58.703 45.455 6.05 0.00 35.69 3.41
2913 3637 3.318275 TCTGGAAGTGTGTACTCAGTGAC 59.682 47.826 6.05 3.66 35.69 3.67
2914 3638 3.562182 TCTGGAAGTGTGTACTCAGTGA 58.438 45.455 6.05 0.00 35.69 3.41
2915 3639 4.051922 GTTCTGGAAGTGTGTACTCAGTG 58.948 47.826 6.05 0.00 35.69 3.66
2916 3640 3.961408 AGTTCTGGAAGTGTGTACTCAGT 59.039 43.478 0.00 0.00 35.69 3.41
2917 3641 4.592485 AGTTCTGGAAGTGTGTACTCAG 57.408 45.455 0.00 0.00 35.69 3.35
2918 3642 5.773176 TCATAGTTCTGGAAGTGTGTACTCA 59.227 40.000 12.32 0.00 35.69 3.41
2919 3643 6.268825 TCATAGTTCTGGAAGTGTGTACTC 57.731 41.667 12.32 0.00 35.69 2.59
2937 3661 6.259387 TGTGCTACTGAAATCTGCATTCATAG 59.741 38.462 1.85 7.34 36.30 2.23
2943 3667 3.947868 AGTGTGCTACTGAAATCTGCAT 58.052 40.909 0.00 0.00 38.49 3.96
2976 3700 5.976458 TGGTCAAACTGAGAGCAAAATTTT 58.024 33.333 0.00 0.00 40.19 1.82
3030 3754 2.993220 TGCACATACTAGTTTGCACGAG 59.007 45.455 17.82 4.87 40.01 4.18
3042 3766 9.304731 CTATTAATTTGCAAACATGCACATACT 57.695 29.630 15.41 0.00 45.32 2.12
3043 3767 8.542132 CCTATTAATTTGCAAACATGCACATAC 58.458 33.333 15.41 0.00 45.32 2.39
3117 3848 3.949754 CTCCTGTTGGTTACATCATGCAT 59.050 43.478 0.00 0.00 35.85 3.96
3542 4282 0.249699 AGTTGAACATGACGTCGGCA 60.250 50.000 1.64 1.64 0.00 5.69
3609 4355 0.875728 CCGTCCCTCTAGCTATCACG 59.124 60.000 0.00 0.00 0.00 4.35
3633 4379 0.745845 ATCCAGATCGTTGCCTGCAC 60.746 55.000 0.00 0.00 0.00 4.57
3638 4384 1.576356 GAGTGATCCAGATCGTTGCC 58.424 55.000 3.33 0.00 40.63 4.52
3640 4386 1.202348 AGCGAGTGATCCAGATCGTTG 60.202 52.381 3.33 0.00 40.63 4.10
3643 4389 0.950836 AGAGCGAGTGATCCAGATCG 59.049 55.000 3.33 0.00 40.63 3.69
3653 4399 4.551509 CGTAATCGAATATCAGAGCGAGTG 59.448 45.833 0.00 0.00 39.71 3.51
3655 4401 4.713806 ACGTAATCGAATATCAGAGCGAG 58.286 43.478 0.00 0.00 40.62 5.03
3659 4405 7.947090 TCTACGTACGTAATCGAATATCAGAG 58.053 38.462 26.68 13.07 40.62 3.35
3663 4409 8.431593 ACTTCTCTACGTACGTAATCGAATATC 58.568 37.037 26.68 0.00 40.62 1.63
3667 4413 5.275927 CGACTTCTCTACGTACGTAATCGAA 60.276 44.000 26.68 23.73 40.62 3.71
3690 4436 3.482598 CGAGCAACAAGACTTATCAAGCG 60.483 47.826 0.00 0.00 0.00 4.68
3694 4440 3.242518 CGACGAGCAACAAGACTTATCA 58.757 45.455 0.00 0.00 0.00 2.15
3696 4442 3.299340 ACGACGAGCAACAAGACTTAT 57.701 42.857 0.00 0.00 0.00 1.73
3699 4451 2.787601 TAACGACGAGCAACAAGACT 57.212 45.000 0.00 0.00 0.00 3.24
3704 4456 2.811855 TCAAGTTAACGACGAGCAACA 58.188 42.857 0.00 0.00 0.00 3.33
3751 4535 8.960591 GCCTACACCTATGCATAAATAAATCAT 58.039 33.333 8.00 0.00 0.00 2.45
3752 4536 8.163408 AGCCTACACCTATGCATAAATAAATCA 58.837 33.333 8.00 0.00 0.00 2.57
3753 4537 8.567285 AGCCTACACCTATGCATAAATAAATC 57.433 34.615 8.00 0.00 0.00 2.17
3754 4538 8.796475 CAAGCCTACACCTATGCATAAATAAAT 58.204 33.333 8.00 0.00 0.00 1.40
3755 4539 7.777910 ACAAGCCTACACCTATGCATAAATAAA 59.222 33.333 8.00 0.00 0.00 1.40
3756 4540 7.287061 ACAAGCCTACACCTATGCATAAATAA 58.713 34.615 8.00 0.00 0.00 1.40
3757 4541 6.837312 ACAAGCCTACACCTATGCATAAATA 58.163 36.000 8.00 0.00 0.00 1.40
3758 4542 5.694995 ACAAGCCTACACCTATGCATAAAT 58.305 37.500 8.00 0.00 0.00 1.40
3759 4543 5.110814 ACAAGCCTACACCTATGCATAAA 57.889 39.130 8.00 0.00 0.00 1.40
3760 4544 4.771114 ACAAGCCTACACCTATGCATAA 57.229 40.909 8.00 0.00 0.00 1.90
3761 4545 4.262463 GCTACAAGCCTACACCTATGCATA 60.262 45.833 6.20 6.20 34.48 3.14
3762 4546 3.495100 GCTACAAGCCTACACCTATGCAT 60.495 47.826 3.79 3.79 34.48 3.96
3763 4547 2.158957 GCTACAAGCCTACACCTATGCA 60.159 50.000 0.00 0.00 34.48 3.96
3764 4548 2.484889 GCTACAAGCCTACACCTATGC 58.515 52.381 0.00 0.00 34.48 3.14
3776 4560 1.550976 AGTCTACCACAGGCTACAAGC 59.449 52.381 0.00 0.00 37.48 4.01
3777 4561 5.599999 ATTAGTCTACCACAGGCTACAAG 57.400 43.478 0.00 0.00 41.23 3.16
3787 4571 8.276252 TCCAAAATTGCTAATTAGTCTACCAC 57.724 34.615 13.91 0.00 0.00 4.16
3894 4678 3.560636 AGGTGTGCTAGTTCAGTGTTT 57.439 42.857 0.00 0.00 0.00 2.83
3912 4696 5.830912 TGTTGTTCTTGCAAATTCTGTAGG 58.169 37.500 0.00 0.00 0.00 3.18
3972 4756 1.133761 GGGGAAGGGAGATAAACAGCC 60.134 57.143 0.00 0.00 0.00 4.85
3975 4759 2.205342 CCAGGGGAAGGGAGATAAACA 58.795 52.381 0.00 0.00 0.00 2.83
3980 4764 1.006631 ATGCCAGGGGAAGGGAGAT 59.993 57.895 0.00 0.00 0.00 2.75
3981 4765 2.002977 CATGCCAGGGGAAGGGAGA 61.003 63.158 0.00 0.00 0.00 3.71
4017 4801 0.958382 TGTTACATCGGTGCCCTTGC 60.958 55.000 0.00 0.00 38.26 4.01
4039 4823 4.536765 GAAAATACATGGGATCCACTGGT 58.463 43.478 15.23 8.35 35.80 4.00
4044 4828 6.022315 AGTTTTGGAAAATACATGGGATCCA 58.978 36.000 15.23 0.00 38.19 3.41
4045 4829 6.544928 AGTTTTGGAAAATACATGGGATCC 57.455 37.500 1.92 1.92 0.00 3.36
4048 4832 9.362151 GGATATAGTTTTGGAAAATACATGGGA 57.638 33.333 0.00 0.00 0.00 4.37
4049 4833 9.367160 AGGATATAGTTTTGGAAAATACATGGG 57.633 33.333 0.00 0.00 0.00 4.00
4110 4894 2.492484 CGGTCTCTAGGTGTAGCAAAGT 59.508 50.000 0.00 0.00 0.00 2.66
4115 4899 2.853705 AGATCGGTCTCTAGGTGTAGC 58.146 52.381 0.00 0.00 0.00 3.58
4121 4905 3.307621 GGGGTAGTAGATCGGTCTCTAGG 60.308 56.522 0.00 0.00 35.87 3.02
4126 4910 4.803329 TTTAGGGGTAGTAGATCGGTCT 57.197 45.455 2.49 2.49 38.52 3.85
4127 4911 5.859205 TTTTTAGGGGTAGTAGATCGGTC 57.141 43.478 0.00 0.00 0.00 4.79
4154 4938 9.959721 AGCTTTTATTTTGTAGATTGGTCTCTA 57.040 29.630 0.00 0.00 35.87 2.43
4155 4939 8.870075 AGCTTTTATTTTGTAGATTGGTCTCT 57.130 30.769 0.00 0.00 35.87 3.10
4156 4940 9.989869 GTAGCTTTTATTTTGTAGATTGGTCTC 57.010 33.333 0.00 0.00 35.87 3.36
4179 4963 1.878088 GCATGCCACCTCATCATGTAG 59.122 52.381 6.36 0.00 39.64 2.74
4217 5009 2.087646 GAATTTCAGGGTGTGAGCCTC 58.912 52.381 0.00 0.00 43.92 4.70
4285 5077 0.119155 TGGTGAGTCCCCTTGGAGAT 59.881 55.000 0.00 0.00 42.85 2.75
4305 5097 1.284785 TCTGGACATTTGGGGGTGATC 59.715 52.381 0.00 0.00 0.00 2.92
4309 5101 1.774300 GGTCTGGACATTTGGGGGT 59.226 57.895 3.10 0.00 0.00 4.95
4337 5129 3.366052 TTGGATGCCTAGAAAGTTCCC 57.634 47.619 0.00 0.00 0.00 3.97
4338 5130 3.129462 GCTTTGGATGCCTAGAAAGTTCC 59.871 47.826 0.00 0.00 0.00 3.62
4358 5150 1.244019 GCCCAATTTGGTGAGTCGCT 61.244 55.000 14.26 0.00 35.17 4.93
4398 5190 0.551396 ATTTGGGGTCCGAGGGATTC 59.449 55.000 0.00 0.00 32.73 2.52
4405 5197 2.303043 CCACCTATTTGGGGTCCGA 58.697 57.895 0.00 0.00 37.60 4.55
4406 5198 4.977393 CCACCTATTTGGGGTCCG 57.023 61.111 0.00 0.00 37.60 4.79
4418 5210 1.846124 TTTCCCGAAGCTCCCACCT 60.846 57.895 0.00 0.00 0.00 4.00
4427 5219 0.317479 ACGTCCAGAGTTTCCCGAAG 59.683 55.000 0.00 0.00 0.00 3.79
4434 5226 0.966920 ATGGTCGACGTCCAGAGTTT 59.033 50.000 18.37 0.00 38.42 2.66
4453 5245 1.741706 GGTGTTAGAGTCCGATCGACA 59.258 52.381 18.66 8.13 44.66 4.35
4455 5247 2.118313 TGGTGTTAGAGTCCGATCGA 57.882 50.000 18.66 0.00 0.00 3.59
4456 5248 2.933495 TTGGTGTTAGAGTCCGATCG 57.067 50.000 8.51 8.51 0.00 3.69
4457 5249 4.113354 GACATTGGTGTTAGAGTCCGATC 58.887 47.826 0.00 0.00 39.09 3.69
4458 5250 3.118738 GGACATTGGTGTTAGAGTCCGAT 60.119 47.826 0.00 0.00 39.09 4.18
4483 5275 1.760613 CGGCTATGAGTGGGGTTTAGA 59.239 52.381 0.00 0.00 0.00 2.10
4498 5290 7.558444 AGGGAATTATTGTGAAAAATACGGCTA 59.442 33.333 0.00 0.00 0.00 3.93
4503 5295 8.414003 GGAGGAGGGAATTATTGTGAAAAATAC 58.586 37.037 0.00 0.00 0.00 1.89
4504 5296 7.284489 CGGAGGAGGGAATTATTGTGAAAAATA 59.716 37.037 0.00 0.00 0.00 1.40
4513 5305 2.370189 AGAGCGGAGGAGGGAATTATTG 59.630 50.000 0.00 0.00 0.00 1.90
4517 5309 0.325671 TGAGAGCGGAGGAGGGAATT 60.326 55.000 0.00 0.00 0.00 2.17
4520 5312 0.757188 GATTGAGAGCGGAGGAGGGA 60.757 60.000 0.00 0.00 0.00 4.20
4525 5317 0.249405 GCAGAGATTGAGAGCGGAGG 60.249 60.000 0.00 0.00 0.00 4.30
4530 5322 1.558741 CGTGAGCAGAGATTGAGAGC 58.441 55.000 0.00 0.00 0.00 4.09
4537 5329 1.380403 CGGTCTCCGTGAGCAGAGAT 61.380 60.000 0.00 0.00 42.73 2.75
4561 5353 4.194640 GGGAGTCTATATATACGACGGCA 58.805 47.826 0.00 0.00 33.10 5.69
4566 5358 7.179966 ACAATGTGGGGAGTCTATATATACGA 58.820 38.462 0.00 0.00 0.00 3.43
4568 5360 8.362464 TGACAATGTGGGGAGTCTATATATAC 57.638 38.462 0.00 0.00 0.00 1.47
4571 5363 6.239600 GCTTGACAATGTGGGGAGTCTATATA 60.240 42.308 0.00 0.00 0.00 0.86
4573 5365 4.141711 GCTTGACAATGTGGGGAGTCTATA 60.142 45.833 0.00 0.00 0.00 1.31
4574 5366 3.370953 GCTTGACAATGTGGGGAGTCTAT 60.371 47.826 0.00 0.00 0.00 1.98
4575 5367 2.027192 GCTTGACAATGTGGGGAGTCTA 60.027 50.000 0.00 0.00 0.00 2.59
4576 5368 1.271597 GCTTGACAATGTGGGGAGTCT 60.272 52.381 0.00 0.00 0.00 3.24
4577 5369 1.168714 GCTTGACAATGTGGGGAGTC 58.831 55.000 0.00 0.00 0.00 3.36
4578 5370 0.251341 GGCTTGACAATGTGGGGAGT 60.251 55.000 0.00 0.00 0.00 3.85
4579 5371 0.038744 AGGCTTGACAATGTGGGGAG 59.961 55.000 0.00 0.00 0.00 4.30
4580 5372 0.482446 AAGGCTTGACAATGTGGGGA 59.518 50.000 0.00 0.00 0.00 4.81


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.