Multiple sequence alignment - TraesCS6A01G074700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G074700 chr6A 100.000 4037 0 0 1 4037 43273512 43277548 0.000000e+00 7456.0
1 TraesCS6A01G074700 chr6A 95.403 2371 94 9 1676 4034 44184270 44186637 0.000000e+00 3760.0
2 TraesCS6A01G074700 chr6A 95.276 2371 97 9 1676 4034 44092973 44095340 0.000000e+00 3744.0
3 TraesCS6A01G074700 chr6A 85.082 429 33 9 40 467 44090971 44091369 3.760000e-110 409.0
4 TraesCS6A01G074700 chr6A 85.082 429 33 9 40 467 44182268 44182666 3.760000e-110 409.0
5 TraesCS6A01G074700 chr6A 82.201 309 28 16 1033 1335 44092336 44092623 1.450000e-59 241.0
6 TraesCS6A01G074700 chr6A 82.201 309 28 16 1033 1335 44183633 44183920 1.450000e-59 241.0
7 TraesCS6A01G074700 chrUn 92.514 1456 78 16 1676 3122 104627365 104625932 0.000000e+00 2056.0
8 TraesCS6A01G074700 chrUn 91.901 1457 83 18 1676 3122 104682558 104681127 0.000000e+00 2004.0
9 TraesCS6A01G074700 chrUn 92.488 1411 79 13 1718 3122 104798965 104797576 0.000000e+00 1993.0
10 TraesCS6A01G074700 chrUn 90.568 774 53 11 898 1667 104799727 104798970 0.000000e+00 1007.0
11 TraesCS6A01G074700 chrUn 85.463 454 45 10 51 497 104800342 104799903 1.710000e-123 453.0
12 TraesCS6A01G074700 chrUn 85.082 429 33 9 40 467 476082637 476082239 3.760000e-110 409.0
13 TraesCS6A01G074700 chrUn 78.313 415 45 21 1034 1426 104683160 104682769 4.060000e-55 226.0
14 TraesCS6A01G074700 chrUn 78.345 411 42 22 1042 1426 104627981 104627592 5.250000e-54 222.0
15 TraesCS6A01G074700 chr6B 92.113 1344 68 14 1676 3014 77010953 77012263 0.000000e+00 1860.0
16 TraesCS6A01G074700 chr6B 92.932 1146 48 13 1847 2992 77458070 77456958 0.000000e+00 1637.0
17 TraesCS6A01G074700 chr6B 86.484 947 77 17 756 1690 77010094 77011001 0.000000e+00 992.0
18 TraesCS6A01G074700 chr6B 84.793 434 37 12 60 474 77009653 77010076 3.760000e-110 409.0
19 TraesCS6A01G074700 chr6B 79.904 418 36 24 1033 1426 77459028 77458635 3.090000e-66 263.0
20 TraesCS6A01G074700 chr6B 91.813 171 10 3 1676 1843 77458391 77458222 6.750000e-58 235.0
21 TraesCS6A01G074700 chr7B 77.728 889 178 15 3115 3991 622618082 622618962 9.940000e-146 527.0
22 TraesCS6A01G074700 chr7B 76.700 897 185 19 3109 3992 463474292 463473407 1.020000e-130 477.0
23 TraesCS6A01G074700 chr5B 78.043 838 165 13 3115 3938 535046022 535045190 1.000000e-140 510.0
24 TraesCS6A01G074700 chr6D 77.111 900 181 19 3109 3992 161786 162676 7.790000e-137 497.0
25 TraesCS6A01G074700 chr6D 73.046 742 190 6 3259 3993 62211672 62210934 1.860000e-63 254.0
26 TraesCS6A01G074700 chr2A 76.642 822 168 15 3116 3921 27627267 27626454 2.230000e-117 433.0
27 TraesCS6A01G074700 chr3D 78.738 602 109 16 3106 3694 612690926 612690331 6.330000e-103 385.0
28 TraesCS6A01G074700 chr3D 89.820 167 14 3 494 657 98843489 98843655 1.140000e-50 211.0
29 TraesCS6A01G074700 chr3D 89.820 167 14 3 494 657 145972543 145972709 1.140000e-50 211.0
30 TraesCS6A01G074700 chr3D 89.820 167 14 3 494 657 460988884 460988718 1.140000e-50 211.0
31 TraesCS6A01G074700 chr4D 78.731 536 104 7 3387 3914 29398809 29399342 2.310000e-92 350.0
32 TraesCS6A01G074700 chr7A 89.820 167 14 3 494 657 523270892 523271058 1.140000e-50 211.0
33 TraesCS6A01G074700 chr7D 89.222 167 15 3 494 657 4513796 4513962 5.290000e-49 206.0
34 TraesCS6A01G074700 chr7D 89.222 167 15 3 494 657 225016256 225016422 5.290000e-49 206.0
35 TraesCS6A01G074700 chr7D 88.889 171 12 6 494 657 517035418 517035588 1.900000e-48 204.0
36 TraesCS6A01G074700 chr1D 89.222 167 15 3 494 657 307007371 307007537 5.290000e-49 206.0
37 TraesCS6A01G074700 chr1D 89.222 167 15 3 494 657 356185939 356185773 5.290000e-49 206.0
38 TraesCS6A01G074700 chr2D 95.082 61 3 0 3117 3177 580385735 580385675 3.320000e-16 97.1
39 TraesCS6A01G074700 chr5A 93.750 64 3 1 3114 3177 580557760 580557822 1.190000e-15 95.3
40 TraesCS6A01G074700 chr3B 90.476 42 2 2 901 940 564243197 564243238 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G074700 chr6A 43273512 43277548 4036 False 7456.000000 7456 100.000000 1 4037 1 chr6A.!!$F1 4036
1 TraesCS6A01G074700 chr6A 44182268 44186637 4369 False 1470.000000 3760 87.562000 40 4034 3 chr6A.!!$F3 3994
2 TraesCS6A01G074700 chr6A 44090971 44095340 4369 False 1464.666667 3744 87.519667 40 4034 3 chr6A.!!$F2 3994
3 TraesCS6A01G074700 chrUn 104797576 104800342 2766 True 1151.000000 1993 89.506333 51 3122 3 chrUn.!!$R4 3071
4 TraesCS6A01G074700 chrUn 104625932 104627981 2049 True 1139.000000 2056 85.429500 1042 3122 2 chrUn.!!$R2 2080
5 TraesCS6A01G074700 chrUn 104681127 104683160 2033 True 1115.000000 2004 85.107000 1034 3122 2 chrUn.!!$R3 2088
6 TraesCS6A01G074700 chr6B 77009653 77012263 2610 False 1087.000000 1860 87.796667 60 3014 3 chr6B.!!$F1 2954
7 TraesCS6A01G074700 chr6B 77456958 77459028 2070 True 711.666667 1637 88.216333 1033 2992 3 chr6B.!!$R1 1959
8 TraesCS6A01G074700 chr7B 622618082 622618962 880 False 527.000000 527 77.728000 3115 3991 1 chr7B.!!$F1 876
9 TraesCS6A01G074700 chr7B 463473407 463474292 885 True 477.000000 477 76.700000 3109 3992 1 chr7B.!!$R1 883
10 TraesCS6A01G074700 chr5B 535045190 535046022 832 True 510.000000 510 78.043000 3115 3938 1 chr5B.!!$R1 823
11 TraesCS6A01G074700 chr6D 161786 162676 890 False 497.000000 497 77.111000 3109 3992 1 chr6D.!!$F1 883
12 TraesCS6A01G074700 chr6D 62210934 62211672 738 True 254.000000 254 73.046000 3259 3993 1 chr6D.!!$R1 734
13 TraesCS6A01G074700 chr2A 27626454 27627267 813 True 433.000000 433 76.642000 3116 3921 1 chr2A.!!$R1 805
14 TraesCS6A01G074700 chr3D 612690331 612690926 595 True 385.000000 385 78.738000 3106 3694 1 chr3D.!!$R2 588
15 TraesCS6A01G074700 chr4D 29398809 29399342 533 False 350.000000 350 78.731000 3387 3914 1 chr4D.!!$F1 527

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
56 57 0.604243 AACATTCGGTGCCTTGCGTA 60.604 50.000 0.00 0.0 0.00 4.42 F
1151 1753 0.612229 TGCTCTGCTCCTCCTGAAAG 59.388 55.000 0.00 0.0 0.00 2.62 F
1171 1778 1.410882 GCAGGCCAAACAAGGTAAACA 59.589 47.619 5.01 0.0 0.00 2.83 F
2552 3438 0.609406 GGAAGGGCACTTGAAGGACC 60.609 60.000 5.57 0.0 36.97 4.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1335 1956 0.393132 TTCGTGGCACCAGTTTGACA 60.393 50.0 12.86 0.0 29.41 3.58 R
2130 3016 0.243907 CTGGACAACCTCGTCGATGT 59.756 55.0 4.21 0.0 36.73 3.06 R
2663 3549 2.797792 GCTGCTCTGAACGATCTTCGAT 60.798 50.0 3.62 0.0 43.74 3.59 R
3459 4363 1.526575 CTGCCGTGCCACTTCCATTT 61.527 55.0 0.00 0.0 0.00 2.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.928801 TGTGCCATACTTGTGACACT 57.071 45.000 7.20 0.00 0.00 3.55
21 22 2.493035 TGTGCCATACTTGTGACACTG 58.507 47.619 7.20 2.56 0.00 3.66
22 23 2.103941 TGTGCCATACTTGTGACACTGA 59.896 45.455 7.20 0.00 0.00 3.41
23 24 3.244526 TGTGCCATACTTGTGACACTGAT 60.245 43.478 7.20 0.00 0.00 2.90
24 25 3.372206 GTGCCATACTTGTGACACTGATC 59.628 47.826 7.20 0.00 0.00 2.92
25 26 2.604914 GCCATACTTGTGACACTGATCG 59.395 50.000 7.20 0.00 0.00 3.69
26 27 3.849911 CCATACTTGTGACACTGATCGT 58.150 45.455 7.20 0.00 0.00 3.73
27 28 4.245660 CCATACTTGTGACACTGATCGTT 58.754 43.478 7.20 0.00 0.00 3.85
28 29 4.690748 CCATACTTGTGACACTGATCGTTT 59.309 41.667 7.20 0.00 0.00 3.60
29 30 5.389830 CCATACTTGTGACACTGATCGTTTG 60.390 44.000 7.20 2.97 0.00 2.93
30 31 3.792401 ACTTGTGACACTGATCGTTTGA 58.208 40.909 7.20 0.00 0.00 2.69
31 32 4.188462 ACTTGTGACACTGATCGTTTGAA 58.812 39.130 7.20 0.00 0.00 2.69
32 33 4.634004 ACTTGTGACACTGATCGTTTGAAA 59.366 37.500 7.20 0.00 0.00 2.69
33 34 5.123186 ACTTGTGACACTGATCGTTTGAAAA 59.877 36.000 7.20 0.00 0.00 2.29
34 35 5.553290 TGTGACACTGATCGTTTGAAAAA 57.447 34.783 7.20 0.00 0.00 1.94
56 57 0.604243 AACATTCGGTGCCTTGCGTA 60.604 50.000 0.00 0.00 0.00 4.42
89 90 0.976641 AGTGCCGTTCTGAATCTCCA 59.023 50.000 0.00 0.00 0.00 3.86
114 117 2.274760 GCTGCCAGCAGAATCCCT 59.725 61.111 23.40 0.00 46.30 4.20
183 186 2.512745 GTGTGCGTGTGGGTGTGA 60.513 61.111 0.00 0.00 0.00 3.58
195 202 1.092921 GGGTGTGAGTGTGCGACAAA 61.093 55.000 0.00 0.00 0.00 2.83
347 372 2.530497 GCGGCACACTGTTGTTCGA 61.530 57.895 0.00 0.00 33.79 3.71
369 394 1.137086 TGCTGCTAGCTACCTACTTGC 59.863 52.381 17.23 6.76 42.97 4.01
376 401 5.831525 TGCTAGCTACCTACTTGCAGTTATA 59.168 40.000 17.23 0.00 40.20 0.98
410 435 2.441164 TGTTGCGTTGGGGTGCTT 60.441 55.556 0.00 0.00 0.00 3.91
413 438 1.530419 TTGCGTTGGGGTGCTTCAT 60.530 52.632 0.00 0.00 0.00 2.57
454 479 1.734117 GCACTTTGGCGGCATCAAC 60.734 57.895 14.32 0.00 0.00 3.18
467 492 4.625028 CGGCATCAACTCAATCATCTCTA 58.375 43.478 0.00 0.00 0.00 2.43
469 494 4.447054 GGCATCAACTCAATCATCTCTACG 59.553 45.833 0.00 0.00 0.00 3.51
470 495 5.284864 GCATCAACTCAATCATCTCTACGA 58.715 41.667 0.00 0.00 0.00 3.43
471 496 5.925397 GCATCAACTCAATCATCTCTACGAT 59.075 40.000 0.00 0.00 0.00 3.73
494 520 5.920903 TGACTACTCCCCCGTTTTATAATG 58.079 41.667 0.00 0.00 0.00 1.90
496 522 6.610830 TGACTACTCCCCCGTTTTATAATGTA 59.389 38.462 0.00 0.00 0.00 2.29
497 523 6.820335 ACTACTCCCCCGTTTTATAATGTAC 58.180 40.000 0.00 0.00 0.00 2.90
498 524 5.963214 ACTCCCCCGTTTTATAATGTACT 57.037 39.130 0.00 0.00 0.00 2.73
499 525 5.922053 ACTCCCCCGTTTTATAATGTACTC 58.078 41.667 0.00 0.00 0.00 2.59
500 526 5.163269 ACTCCCCCGTTTTATAATGTACTCC 60.163 44.000 0.00 0.00 0.00 3.85
501 527 4.102996 TCCCCCGTTTTATAATGTACTCCC 59.897 45.833 0.00 0.00 0.00 4.30
502 528 4.103627 CCCCCGTTTTATAATGTACTCCCT 59.896 45.833 0.00 0.00 0.00 4.20
503 529 5.303165 CCCCGTTTTATAATGTACTCCCTC 58.697 45.833 0.00 0.00 0.00 4.30
504 530 5.303165 CCCGTTTTATAATGTACTCCCTCC 58.697 45.833 0.00 0.00 0.00 4.30
505 531 4.986659 CCGTTTTATAATGTACTCCCTCCG 59.013 45.833 0.00 0.00 0.00 4.63
506 532 5.452356 CCGTTTTATAATGTACTCCCTCCGT 60.452 44.000 0.00 0.00 0.00 4.69
507 533 6.044682 CGTTTTATAATGTACTCCCTCCGTT 58.955 40.000 0.00 0.00 0.00 4.44
508 534 6.536224 CGTTTTATAATGTACTCCCTCCGTTT 59.464 38.462 0.00 0.00 0.00 3.60
509 535 7.254218 CGTTTTATAATGTACTCCCTCCGTTTC 60.254 40.741 0.00 0.00 0.00 2.78
510 536 4.684484 ATAATGTACTCCCTCCGTTTCC 57.316 45.455 0.00 0.00 0.00 3.13
511 537 1.946984 ATGTACTCCCTCCGTTTCCA 58.053 50.000 0.00 0.00 0.00 3.53
512 538 1.719529 TGTACTCCCTCCGTTTCCAA 58.280 50.000 0.00 0.00 0.00 3.53
513 539 2.048601 TGTACTCCCTCCGTTTCCAAA 58.951 47.619 0.00 0.00 0.00 3.28
514 540 2.640826 TGTACTCCCTCCGTTTCCAAAT 59.359 45.455 0.00 0.00 0.00 2.32
515 541 3.839490 TGTACTCCCTCCGTTTCCAAATA 59.161 43.478 0.00 0.00 0.00 1.40
516 542 4.472108 TGTACTCCCTCCGTTTCCAAATAT 59.528 41.667 0.00 0.00 0.00 1.28
517 543 5.662208 TGTACTCCCTCCGTTTCCAAATATA 59.338 40.000 0.00 0.00 0.00 0.86
518 544 5.703730 ACTCCCTCCGTTTCCAAATATAA 57.296 39.130 0.00 0.00 0.00 0.98
519 545 5.681639 ACTCCCTCCGTTTCCAAATATAAG 58.318 41.667 0.00 0.00 0.00 1.73
520 546 5.191124 ACTCCCTCCGTTTCCAAATATAAGT 59.809 40.000 0.00 0.00 0.00 2.24
521 547 5.677567 TCCCTCCGTTTCCAAATATAAGTC 58.322 41.667 0.00 0.00 0.00 3.01
522 548 5.427481 TCCCTCCGTTTCCAAATATAAGTCT 59.573 40.000 0.00 0.00 0.00 3.24
523 549 6.069847 TCCCTCCGTTTCCAAATATAAGTCTT 60.070 38.462 0.00 0.00 0.00 3.01
524 550 6.602009 CCCTCCGTTTCCAAATATAAGTCTTT 59.398 38.462 0.00 0.00 0.00 2.52
525 551 7.122204 CCCTCCGTTTCCAAATATAAGTCTTTT 59.878 37.037 0.00 0.00 0.00 2.27
526 552 8.520351 CCTCCGTTTCCAAATATAAGTCTTTTT 58.480 33.333 0.00 0.00 0.00 1.94
553 579 9.283768 AGTGATTTCAACAAATGACTACATACA 57.716 29.630 0.00 0.00 42.62 2.29
554 580 9.891828 GTGATTTCAACAAATGACTACATACAA 57.108 29.630 0.00 0.00 37.92 2.41
568 594 9.500785 TGACTACATACAAATCAAAATGAGTGA 57.499 29.630 0.00 0.00 0.00 3.41
577 603 9.814899 ACAAATCAAAATGAGTGAATTTACACA 57.185 25.926 3.12 3.12 42.45 3.72
611 637 8.735303 TGTTTACATGCATTGTATGTTGTAAC 57.265 30.769 22.66 21.21 40.46 2.50
612 638 7.810282 TGTTTACATGCATTGTATGTTGTAACC 59.190 33.333 22.66 7.37 40.46 2.85
613 639 5.973899 ACATGCATTGTATGTTGTAACCA 57.026 34.783 13.78 0.00 36.57 3.67
614 640 6.528537 ACATGCATTGTATGTTGTAACCAT 57.471 33.333 13.78 0.00 36.57 3.55
615 641 6.934056 ACATGCATTGTATGTTGTAACCATT 58.066 32.000 13.78 0.00 36.57 3.16
616 642 7.385267 ACATGCATTGTATGTTGTAACCATTT 58.615 30.769 13.78 0.00 36.57 2.32
617 643 7.331440 ACATGCATTGTATGTTGTAACCATTTG 59.669 33.333 13.78 0.00 36.57 2.32
618 644 6.986250 TGCATTGTATGTTGTAACCATTTGA 58.014 32.000 0.00 0.00 0.00 2.69
619 645 7.436933 TGCATTGTATGTTGTAACCATTTGAA 58.563 30.769 0.00 0.00 0.00 2.69
620 646 7.928167 TGCATTGTATGTTGTAACCATTTGAAA 59.072 29.630 0.00 0.00 0.00 2.69
621 647 8.934825 GCATTGTATGTTGTAACCATTTGAAAT 58.065 29.630 0.00 0.00 0.00 2.17
623 649 9.995003 ATTGTATGTTGTAACCATTTGAAATGT 57.005 25.926 15.93 2.12 0.00 2.71
624 650 9.469807 TTGTATGTTGTAACCATTTGAAATGTC 57.530 29.630 15.93 5.28 0.00 3.06
625 651 8.855110 TGTATGTTGTAACCATTTGAAATGTCT 58.145 29.630 15.93 5.83 0.00 3.41
666 692 7.778185 AAAATAGAGGGAGTAGTGCGTATAT 57.222 36.000 0.00 0.00 0.00 0.86
894 1464 6.464895 TTCCGCAAGCTTGATTAAAATTTG 57.535 33.333 30.39 0.00 0.00 2.32
947 1518 9.758651 ATGCAATACATTATGAAACGTACTAGA 57.241 29.630 0.00 0.00 34.40 2.43
948 1519 9.589111 TGCAATACATTATGAAACGTACTAGAA 57.411 29.630 0.00 0.00 0.00 2.10
994 1566 4.380945 TAGGTACGGCGTGGGGGT 62.381 66.667 24.86 5.12 0.00 4.95
1037 1639 7.969536 AGATTGGTTAGATCCGATAAACATG 57.030 36.000 0.00 0.00 30.29 3.21
1151 1753 0.612229 TGCTCTGCTCCTCCTGAAAG 59.388 55.000 0.00 0.00 0.00 2.62
1171 1778 1.410882 GCAGGCCAAACAAGGTAAACA 59.589 47.619 5.01 0.00 0.00 2.83
1221 1828 1.544246 TGTCGATCGCTTTCTTCTCCA 59.456 47.619 11.09 0.00 0.00 3.86
1335 1956 7.821846 GGTGTTCTTCATCAAGTAGATCTTCTT 59.178 37.037 8.67 8.67 33.72 2.52
1439 2151 8.560039 TGTTAGGAAATACAGTACTACTAGGGA 58.440 37.037 0.00 0.00 0.00 4.20
1445 2157 3.622630 ACAGTACTACTAGGGAGCACTG 58.377 50.000 18.82 18.82 38.26 3.66
1464 2178 5.728471 CACTGACAGACTCTGTTCCATTAT 58.272 41.667 13.06 0.00 45.44 1.28
1481 2195 8.639761 GTTCCATTATAAGCTGGTCTAGAACTA 58.360 37.037 9.68 0.00 34.03 2.24
1548 2273 8.523915 TTGCTTCAGATGATTGGTATTTGTAT 57.476 30.769 0.00 0.00 0.00 2.29
1597 2323 5.542779 TCTTTGGAGACAGTAGAAGCTTTC 58.457 41.667 0.00 0.00 44.54 2.62
1639 2368 7.217200 ACTGATACAGAGCTTTTTCACTACAA 58.783 34.615 5.76 0.00 35.18 2.41
1640 2369 7.880195 ACTGATACAGAGCTTTTTCACTACAAT 59.120 33.333 5.76 0.00 35.18 2.71
1641 2370 8.621532 TGATACAGAGCTTTTTCACTACAATT 57.378 30.769 0.00 0.00 0.00 2.32
1642 2371 9.719355 TGATACAGAGCTTTTTCACTACAATTA 57.281 29.630 0.00 0.00 0.00 1.40
1645 2374 7.820648 ACAGAGCTTTTTCACTACAATTATGG 58.179 34.615 0.00 0.00 0.00 2.74
1646 2375 7.665559 ACAGAGCTTTTTCACTACAATTATGGA 59.334 33.333 0.00 0.00 0.00 3.41
1647 2376 8.514594 CAGAGCTTTTTCACTACAATTATGGAA 58.485 33.333 0.00 0.00 0.00 3.53
1648 2377 8.734386 AGAGCTTTTTCACTACAATTATGGAAG 58.266 33.333 0.00 0.00 0.00 3.46
1649 2378 8.409358 AGCTTTTTCACTACAATTATGGAAGT 57.591 30.769 0.00 0.00 0.00 3.01
1650 2379 8.299570 AGCTTTTTCACTACAATTATGGAAGTG 58.700 33.333 7.06 7.06 41.97 3.16
1651 2380 8.082242 GCTTTTTCACTACAATTATGGAAGTGT 58.918 33.333 11.07 0.00 45.37 3.55
1652 2381 9.398170 CTTTTTCACTACAATTATGGAAGTGTG 57.602 33.333 1.33 0.00 43.39 3.82
1653 2382 8.684386 TTTTCACTACAATTATGGAAGTGTGA 57.316 30.769 1.33 0.00 43.39 3.58
1654 2383 8.684386 TTTCACTACAATTATGGAAGTGTGAA 57.316 30.769 0.00 0.00 43.39 3.18
1655 2384 8.862325 TTCACTACAATTATGGAAGTGTGAAT 57.138 30.769 0.00 0.00 43.39 2.57
1656 2385 9.952030 TTCACTACAATTATGGAAGTGTGAATA 57.048 29.630 0.00 0.00 43.39 1.75
1659 2388 8.840321 ACTACAATTATGGAAGTGTGAATATGC 58.160 33.333 1.33 0.00 43.39 3.14
1660 2389 7.042797 ACAATTATGGAAGTGTGAATATGCC 57.957 36.000 0.00 0.00 42.06 4.40
1661 2390 6.835488 ACAATTATGGAAGTGTGAATATGCCT 59.165 34.615 0.00 0.00 42.06 4.75
1662 2391 7.342799 ACAATTATGGAAGTGTGAATATGCCTT 59.657 33.333 0.00 0.00 42.06 4.35
1663 2392 7.902920 ATTATGGAAGTGTGAATATGCCTTT 57.097 32.000 0.00 0.00 0.00 3.11
1664 2393 7.716799 TTATGGAAGTGTGAATATGCCTTTT 57.283 32.000 0.00 0.00 0.00 2.27
1665 2394 5.643379 TGGAAGTGTGAATATGCCTTTTC 57.357 39.130 0.00 0.00 0.00 2.29
1666 2395 5.076182 TGGAAGTGTGAATATGCCTTTTCA 58.924 37.500 0.00 0.00 0.00 2.69
1667 2396 5.538053 TGGAAGTGTGAATATGCCTTTTCAA 59.462 36.000 0.00 0.00 33.90 2.69
1668 2397 6.041409 TGGAAGTGTGAATATGCCTTTTCAAA 59.959 34.615 0.00 0.00 33.90 2.69
1669 2398 6.587608 GGAAGTGTGAATATGCCTTTTCAAAG 59.412 38.462 0.00 0.00 33.90 2.77
1670 2399 6.899393 AGTGTGAATATGCCTTTTCAAAGA 57.101 33.333 0.56 0.00 38.28 2.52
1671 2400 7.288810 AGTGTGAATATGCCTTTTCAAAGAA 57.711 32.000 0.56 0.00 38.28 2.52
1672 2401 7.373493 AGTGTGAATATGCCTTTTCAAAGAAG 58.627 34.615 0.56 0.00 38.28 2.85
1673 2402 7.231317 AGTGTGAATATGCCTTTTCAAAGAAGA 59.769 33.333 0.56 0.00 38.28 2.87
1674 2403 8.031277 GTGTGAATATGCCTTTTCAAAGAAGAT 58.969 33.333 0.56 0.00 38.28 2.40
1698 2427 8.894768 ATATTATGAGAGTGTTAGTGCCTTTC 57.105 34.615 0.00 0.00 0.00 2.62
1750 2483 4.621460 TCTTTCTCAGCGTGTCGATTTAAG 59.379 41.667 0.00 0.00 0.00 1.85
1802 2540 2.599082 CTGATTGACTTCCGTTACTCGC 59.401 50.000 0.00 0.00 38.35 5.03
1811 2549 3.853831 TCCGTTACTCGCTGATGTTTA 57.146 42.857 0.00 0.00 38.35 2.01
2200 3086 1.212688 CCCATAGTCCTGCACCAATCA 59.787 52.381 0.00 0.00 0.00 2.57
2251 3137 3.195610 TGCAGACGGTTGAGTTCAGATAT 59.804 43.478 0.00 0.00 0.00 1.63
2366 3252 2.146342 GCATGGTCCATATCGTTCAGG 58.854 52.381 3.38 0.00 0.00 3.86
2552 3438 0.609406 GGAAGGGCACTTGAAGGACC 60.609 60.000 5.57 0.00 36.97 4.46
2663 3549 2.228138 AGTCGTTGCTCGGTTGTTTA 57.772 45.000 2.56 0.00 40.32 2.01
2852 3738 0.672401 GTGCATTGCAGCTGCCATTT 60.672 50.000 34.64 14.54 40.08 2.32
3353 4257 4.722008 GTGTTGGAAAACACGCCC 57.278 55.556 6.02 0.00 42.85 6.13
3420 4324 1.514678 GGTGCATGGAAGTTGTCGCA 61.515 55.000 0.00 0.00 0.00 5.10
3449 4353 1.001974 TGCATCTTGTTGTAGCCGTCT 59.998 47.619 0.00 0.00 0.00 4.18
3459 4363 1.561076 TGTAGCCGTCTACCAGGACTA 59.439 52.381 0.46 0.00 43.51 2.59
3473 4377 2.749621 CAGGACTAAATGGAAGTGGCAC 59.250 50.000 10.29 10.29 0.00 5.01
3516 4424 1.952990 TGCAAAGACGCAAAGGATTGA 59.047 42.857 0.00 0.00 39.45 2.57
3682 4591 8.555729 AGGTCCAAATAGAAGAATCTGATCTTT 58.444 33.333 0.00 0.00 39.70 2.52
3777 4688 2.874701 CCAACATAGCTGTAGCATCCAC 59.125 50.000 6.65 0.00 45.16 4.02
4000 4911 1.064906 CATGGGAGCCATCTGTCAGTT 60.065 52.381 0.00 0.00 43.15 3.16
4028 4939 2.979813 CGTGCTTTTCTTCCATTTTCCG 59.020 45.455 0.00 0.00 0.00 4.30
4034 4945 3.417069 TTCTTCCATTTTCCGAGCTGA 57.583 42.857 0.00 0.00 0.00 4.26
4035 4946 3.417069 TCTTCCATTTTCCGAGCTGAA 57.583 42.857 0.00 0.00 0.00 3.02
4036 4947 3.955471 TCTTCCATTTTCCGAGCTGAAT 58.045 40.909 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 2.604914 CGATCAGTGTCACAAGTATGGC 59.395 50.000 5.62 0.00 0.00 4.40
5 6 3.849911 ACGATCAGTGTCACAAGTATGG 58.150 45.455 5.62 0.00 0.00 2.74
7 8 5.538118 TCAAACGATCAGTGTCACAAGTAT 58.462 37.500 5.62 0.00 0.00 2.12
9 10 3.792401 TCAAACGATCAGTGTCACAAGT 58.208 40.909 5.62 0.00 0.00 3.16
12 13 5.553290 TTTTTCAAACGATCAGTGTCACA 57.447 34.783 5.62 0.00 0.00 3.58
34 35 1.864565 GCAAGGCACCGAATGTTTTT 58.135 45.000 0.00 0.00 0.00 1.94
35 36 0.318614 CGCAAGGCACCGAATGTTTT 60.319 50.000 0.00 0.00 0.00 2.43
36 37 1.285641 CGCAAGGCACCGAATGTTT 59.714 52.632 0.00 0.00 0.00 2.83
37 38 0.604243 TACGCAAGGCACCGAATGTT 60.604 50.000 0.00 0.00 46.39 2.71
38 39 0.392461 ATACGCAAGGCACCGAATGT 60.392 50.000 0.00 0.00 46.39 2.71
39 40 0.304705 GATACGCAAGGCACCGAATG 59.695 55.000 0.00 0.00 46.39 2.67
40 41 1.151777 CGATACGCAAGGCACCGAAT 61.152 55.000 0.00 0.00 46.39 3.34
41 42 1.807981 CGATACGCAAGGCACCGAA 60.808 57.895 0.00 0.00 46.39 4.30
42 43 2.011741 ATCGATACGCAAGGCACCGA 62.012 55.000 0.00 0.00 46.39 4.69
43 44 1.591594 ATCGATACGCAAGGCACCG 60.592 57.895 0.00 0.00 46.39 4.94
44 45 1.934463 CATCGATACGCAAGGCACC 59.066 57.895 0.00 0.00 46.39 5.01
45 46 1.276844 GCATCGATACGCAAGGCAC 59.723 57.895 0.00 0.00 46.39 5.01
46 47 1.887242 GGCATCGATACGCAAGGCA 60.887 57.895 9.64 0.00 46.39 4.75
47 48 0.319555 TAGGCATCGATACGCAAGGC 60.320 55.000 9.64 3.64 46.39 4.35
48 49 1.670087 CCTAGGCATCGATACGCAAGG 60.670 57.143 9.64 10.70 46.39 3.61
56 57 0.394565 GGCACTTCCTAGGCATCGAT 59.605 55.000 2.96 0.00 0.00 3.59
114 117 1.877443 GGCTTCAACAAGAAACGGCTA 59.123 47.619 0.00 0.00 35.40 3.93
177 180 0.944386 ATTTGTCGCACACTCACACC 59.056 50.000 0.00 0.00 0.00 4.16
178 181 1.597195 TCATTTGTCGCACACTCACAC 59.403 47.619 0.00 0.00 0.00 3.82
179 182 1.946745 TCATTTGTCGCACACTCACA 58.053 45.000 0.00 0.00 0.00 3.58
181 184 1.197492 GCATCATTTGTCGCACACTCA 59.803 47.619 0.00 0.00 0.00 3.41
183 186 0.523072 GGCATCATTTGTCGCACACT 59.477 50.000 0.00 0.00 0.00 3.55
279 289 1.414550 GTGGATAAGGAGGACTGAGGC 59.585 57.143 0.00 0.00 0.00 4.70
280 290 2.752030 TGTGGATAAGGAGGACTGAGG 58.248 52.381 0.00 0.00 0.00 3.86
281 291 4.026744 TCTTGTGGATAAGGAGGACTGAG 58.973 47.826 0.00 0.00 0.00 3.35
282 292 4.026744 CTCTTGTGGATAAGGAGGACTGA 58.973 47.826 0.00 0.00 0.00 3.41
283 293 4.026744 TCTCTTGTGGATAAGGAGGACTG 58.973 47.826 0.00 0.00 0.00 3.51
284 294 4.338795 TCTCTTGTGGATAAGGAGGACT 57.661 45.455 0.00 0.00 0.00 3.85
285 295 4.141824 CCTTCTCTTGTGGATAAGGAGGAC 60.142 50.000 4.46 0.00 45.61 3.85
286 296 4.033709 CCTTCTCTTGTGGATAAGGAGGA 58.966 47.826 4.46 0.00 45.61 3.71
287 297 3.135530 CCCTTCTCTTGTGGATAAGGAGG 59.864 52.174 10.15 0.00 45.61 4.30
288 298 3.432890 GCCCTTCTCTTGTGGATAAGGAG 60.433 52.174 10.15 0.00 45.61 3.69
347 372 3.742640 GCAAGTAGGTAGCTAGCAGCAAT 60.743 47.826 24.01 6.31 45.56 3.56
376 401 5.468746 ACGCAACAGACAACACTTGTTATAT 59.531 36.000 0.00 0.00 45.52 0.86
386 411 1.380403 CCCCAACGCAACAGACAACA 61.380 55.000 0.00 0.00 0.00 3.33
467 492 0.324091 AACGGGGGAGTAGTCATCGT 60.324 55.000 0.00 3.41 0.00 3.73
469 494 4.684484 ATAAAACGGGGGAGTAGTCATC 57.316 45.455 0.00 0.00 0.00 2.92
470 495 6.100714 ACATTATAAAACGGGGGAGTAGTCAT 59.899 38.462 0.00 0.00 0.00 3.06
471 496 5.426185 ACATTATAAAACGGGGGAGTAGTCA 59.574 40.000 0.00 0.00 0.00 3.41
472 497 5.922053 ACATTATAAAACGGGGGAGTAGTC 58.078 41.667 0.00 0.00 0.00 2.59
473 498 5.963214 ACATTATAAAACGGGGGAGTAGT 57.037 39.130 0.00 0.00 0.00 2.73
476 501 5.163269 GGAGTACATTATAAAACGGGGGAGT 60.163 44.000 0.00 0.00 0.00 3.85
477 502 5.303165 GGAGTACATTATAAAACGGGGGAG 58.697 45.833 0.00 0.00 0.00 4.30
478 503 4.102996 GGGAGTACATTATAAAACGGGGGA 59.897 45.833 0.00 0.00 0.00 4.81
494 520 2.845363 TTTGGAAACGGAGGGAGTAC 57.155 50.000 0.00 0.00 0.00 2.73
496 522 5.191124 ACTTATATTTGGAAACGGAGGGAGT 59.809 40.000 0.00 0.00 0.00 3.85
497 523 5.681639 ACTTATATTTGGAAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
498 524 5.427481 AGACTTATATTTGGAAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
499 525 5.681639 AGACTTATATTTGGAAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
500 526 7.625828 AAAGACTTATATTTGGAAACGGAGG 57.374 36.000 0.00 0.00 0.00 4.30
527 553 9.283768 TGTATGTAGTCATTTGTTGAAATCACT 57.716 29.630 0.00 0.00 36.84 3.41
528 554 9.891828 TTGTATGTAGTCATTTGTTGAAATCAC 57.108 29.630 0.00 0.00 35.70 3.06
542 568 9.500785 TCACTCATTTTGATTTGTATGTAGTCA 57.499 29.630 0.00 0.00 0.00 3.41
551 577 9.814899 TGTGTAAATTCACTCATTTTGATTTGT 57.185 25.926 0.00 0.00 38.90 2.83
591 617 5.973899 TGGTTACAACATACAATGCATGT 57.026 34.783 0.00 3.37 46.36 3.21
592 618 7.544915 TCAAATGGTTACAACATACAATGCATG 59.455 33.333 0.00 0.00 0.00 4.06
593 619 7.609960 TCAAATGGTTACAACATACAATGCAT 58.390 30.769 0.00 0.00 0.00 3.96
594 620 6.986250 TCAAATGGTTACAACATACAATGCA 58.014 32.000 0.00 0.00 0.00 3.96
595 621 7.881643 TTCAAATGGTTACAACATACAATGC 57.118 32.000 0.00 0.00 0.00 3.56
597 623 9.995003 ACATTTCAAATGGTTACAACATACAAT 57.005 25.926 14.70 0.00 0.00 2.71
598 624 9.469807 GACATTTCAAATGGTTACAACATACAA 57.530 29.630 14.70 0.00 0.00 2.41
599 625 8.855110 AGACATTTCAAATGGTTACAACATACA 58.145 29.630 14.70 0.00 0.00 2.29
635 661 9.490379 CGCACTACTCCCTCTATTTTTAAATAT 57.510 33.333 0.00 0.00 31.03 1.28
636 662 8.480501 ACGCACTACTCCCTCTATTTTTAAATA 58.519 33.333 0.00 0.00 0.00 1.40
637 663 7.336396 ACGCACTACTCCCTCTATTTTTAAAT 58.664 34.615 0.00 0.00 0.00 1.40
638 664 6.704310 ACGCACTACTCCCTCTATTTTTAAA 58.296 36.000 0.00 0.00 0.00 1.52
639 665 6.290294 ACGCACTACTCCCTCTATTTTTAA 57.710 37.500 0.00 0.00 0.00 1.52
640 666 5.927281 ACGCACTACTCCCTCTATTTTTA 57.073 39.130 0.00 0.00 0.00 1.52
641 667 4.820894 ACGCACTACTCCCTCTATTTTT 57.179 40.909 0.00 0.00 0.00 1.94
642 668 7.778185 ATATACGCACTACTCCCTCTATTTT 57.222 36.000 0.00 0.00 0.00 1.82
643 669 9.476928 AATATATACGCACTACTCCCTCTATTT 57.523 33.333 0.00 0.00 0.00 1.40
644 670 9.476928 AAATATATACGCACTACTCCCTCTATT 57.523 33.333 0.00 0.00 0.00 1.73
645 671 9.476928 AAAATATATACGCACTACTCCCTCTAT 57.523 33.333 0.00 0.00 0.00 1.98
646 672 8.874744 AAAATATATACGCACTACTCCCTCTA 57.125 34.615 0.00 0.00 0.00 2.43
647 673 7.778185 AAAATATATACGCACTACTCCCTCT 57.222 36.000 0.00 0.00 0.00 3.69
943 1514 7.474948 CGCTAGTCGAATCGTTATACTTTCTAG 59.525 40.741 1.52 0.00 41.67 2.43
944 1515 7.286508 CGCTAGTCGAATCGTTATACTTTCTA 58.713 38.462 1.52 0.00 41.67 2.10
945 1516 6.134730 CGCTAGTCGAATCGTTATACTTTCT 58.865 40.000 1.52 0.00 41.67 2.52
946 1517 5.339085 CCGCTAGTCGAATCGTTATACTTTC 59.661 44.000 1.52 0.00 41.67 2.62
947 1518 5.210715 CCGCTAGTCGAATCGTTATACTTT 58.789 41.667 1.52 0.00 41.67 2.66
948 1519 4.781071 CCGCTAGTCGAATCGTTATACTT 58.219 43.478 1.52 0.00 41.67 2.24
957 1528 2.296480 CGCTGCCGCTAGTCGAATC 61.296 63.158 7.94 0.00 41.67 2.52
994 1566 0.178955 TTCTAGACCGTGGGTGGTGA 60.179 55.000 0.00 0.00 44.01 4.02
1037 1639 4.035675 GCCTGCCACTTATATCAACTCAAC 59.964 45.833 0.00 0.00 0.00 3.18
1151 1753 1.410882 TGTTTACCTTGTTTGGCCTGC 59.589 47.619 3.32 0.00 0.00 4.85
1221 1828 1.951602 GGAAAAACAAGCCGTACAGGT 59.048 47.619 0.00 0.00 43.70 4.00
1335 1956 0.393132 TTCGTGGCACCAGTTTGACA 60.393 50.000 12.86 0.00 29.41 3.58
1363 1984 8.658840 AAACTAATATAAACCCTGGCTTTGAA 57.341 30.769 0.00 0.00 0.00 2.69
1439 2151 1.342819 GGAACAGAGTCTGTCAGTGCT 59.657 52.381 25.64 9.42 44.62 4.40
1566 2291 7.303182 TCTACTGTCTCCAAAGAAAATCAGA 57.697 36.000 0.00 0.00 31.93 3.27
1597 2323 4.271696 TCAGTTACTGGTGAGTTGGATG 57.728 45.455 12.79 0.00 33.21 3.51
1639 2368 7.902920 AAAGGCATATTCACACTTCCATAAT 57.097 32.000 0.00 0.00 0.00 1.28
1640 2369 7.395772 TGAAAAGGCATATTCACACTTCCATAA 59.604 33.333 0.00 0.00 30.94 1.90
1641 2370 6.889177 TGAAAAGGCATATTCACACTTCCATA 59.111 34.615 0.00 0.00 30.94 2.74
1642 2371 5.716228 TGAAAAGGCATATTCACACTTCCAT 59.284 36.000 0.00 0.00 30.94 3.41
1643 2372 5.076182 TGAAAAGGCATATTCACACTTCCA 58.924 37.500 0.00 0.00 30.94 3.53
1644 2373 5.643379 TGAAAAGGCATATTCACACTTCC 57.357 39.130 0.00 0.00 30.94 3.46
1645 2374 7.370383 TCTTTGAAAAGGCATATTCACACTTC 58.630 34.615 3.08 0.00 35.42 3.01
1646 2375 7.288810 TCTTTGAAAAGGCATATTCACACTT 57.711 32.000 3.08 0.00 35.42 3.16
1647 2376 6.899393 TCTTTGAAAAGGCATATTCACACT 57.101 33.333 3.08 0.00 35.42 3.55
1648 2377 7.370383 TCTTCTTTGAAAAGGCATATTCACAC 58.630 34.615 3.08 0.00 35.42 3.82
1649 2378 7.523293 TCTTCTTTGAAAAGGCATATTCACA 57.477 32.000 3.08 0.00 35.42 3.58
1657 2386 9.685276 TCTCATAATATCTTCTTTGAAAAGGCA 57.315 29.630 3.08 0.00 36.67 4.75
1667 2396 9.757227 GCACTAACACTCTCATAATATCTTCTT 57.243 33.333 0.00 0.00 0.00 2.52
1668 2397 8.364142 GGCACTAACACTCTCATAATATCTTCT 58.636 37.037 0.00 0.00 0.00 2.85
1669 2398 8.364142 AGGCACTAACACTCTCATAATATCTTC 58.636 37.037 0.00 0.00 36.02 2.87
1670 2399 8.256356 AGGCACTAACACTCTCATAATATCTT 57.744 34.615 0.00 0.00 36.02 2.40
1671 2400 7.847711 AGGCACTAACACTCTCATAATATCT 57.152 36.000 0.00 0.00 36.02 1.98
1672 2401 8.894768 AAAGGCACTAACACTCTCATAATATC 57.105 34.615 0.00 0.00 38.49 1.63
1673 2402 7.934120 GGAAAGGCACTAACACTCTCATAATAT 59.066 37.037 0.00 0.00 38.49 1.28
1674 2403 7.093068 TGGAAAGGCACTAACACTCTCATAATA 60.093 37.037 0.00 0.00 38.49 0.98
1681 2410 2.039084 CCTGGAAAGGCACTAACACTCT 59.961 50.000 0.00 0.00 38.49 3.24
1690 2419 6.321181 TCATAATATGTTTCCTGGAAAGGCAC 59.679 38.462 21.68 11.59 31.87 5.01
1698 2427 9.613428 TTAACACTCTCATAATATGTTTCCTGG 57.387 33.333 0.00 0.00 35.26 4.45
1750 2483 3.001168 CACGTGCAACAGCTAAACAAAAC 60.001 43.478 0.82 0.00 35.74 2.43
1833 2571 0.396435 TGAGTGCCTTGTACCCAGTG 59.604 55.000 0.00 0.00 0.00 3.66
2130 3016 0.243907 CTGGACAACCTCGTCGATGT 59.756 55.000 4.21 0.00 36.73 3.06
2200 3086 3.546714 CTGGCCGGGGAAAACGACT 62.547 63.158 2.57 0.00 0.00 4.18
2663 3549 2.797792 GCTGCTCTGAACGATCTTCGAT 60.798 50.000 3.62 0.00 43.74 3.59
2698 3584 3.070159 ACCGCTGTGCTGTATCATCTAAT 59.930 43.478 0.00 0.00 0.00 1.73
2852 3738 5.128171 AGCACGAACATACTCCTATTACCAA 59.872 40.000 0.00 0.00 0.00 3.67
2985 3871 6.975197 ACATGAGTGATTAACTGAGTACATCG 59.025 38.462 0.00 0.00 40.07 3.84
3353 4257 6.811665 TGGAATATATGGAACGAGCGAAATAG 59.188 38.462 0.00 0.00 0.00 1.73
3411 4315 1.532868 GCAAGATCAAGTGCGACAACT 59.467 47.619 0.00 0.00 0.00 3.16
3420 4324 5.106396 GCTACAACAAGATGCAAGATCAAGT 60.106 40.000 0.00 0.00 0.00 3.16
3449 4353 3.054655 GCCACTTCCATTTAGTCCTGGTA 60.055 47.826 0.00 0.00 34.03 3.25
3459 4363 1.526575 CTGCCGTGCCACTTCCATTT 61.527 55.000 0.00 0.00 0.00 2.32
3473 4377 4.694233 AGACCACTGCTGCTGCCG 62.694 66.667 13.47 9.34 38.71 5.69
3516 4424 3.055167 GCCCTTTTGCCAAGGAAATATGT 60.055 43.478 12.45 0.00 39.81 2.29
3614 4522 2.639327 GCTGACCGCCTTGCCAATT 61.639 57.895 0.00 0.00 0.00 2.32
3666 4575 5.432680 TGAGCCAAAGATCAGATTCTTCT 57.567 39.130 0.00 0.00 34.89 2.85
3682 4591 3.222173 TGGAAACTTAAAGCTGAGCCA 57.778 42.857 0.00 0.00 0.00 4.75
3761 4670 2.556189 CTCGAGTGGATGCTACAGCTAT 59.444 50.000 3.62 0.00 42.66 2.97
4000 4911 2.218603 GGAAGAAAAGCACGGTTCTGA 58.781 47.619 0.00 0.00 34.33 3.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.