Multiple sequence alignment - TraesCS6A01G070900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G070900 chr6A 100.000 3292 0 0 1 3292 38722712 38726003 0.000000e+00 6080
1 TraesCS6A01G070900 chr6A 87.660 1248 112 15 927 2153 38684509 38685735 0.000000e+00 1413
2 TraesCS6A01G070900 chr6A 96.023 704 28 0 77 780 97697255 97696552 0.000000e+00 1146
3 TraesCS6A01G070900 chr6A 81.857 1389 148 49 927 2255 38741723 38743067 0.000000e+00 1074
4 TraesCS6A01G070900 chr6D 96.655 1405 33 5 816 2218 34501878 34503270 0.000000e+00 2322
5 TraesCS6A01G070900 chr6D 91.231 1072 55 13 2252 3292 34503350 34504413 0.000000e+00 1423
6 TraesCS6A01G070900 chr6D 87.993 1166 100 16 999 2147 34430690 34431832 0.000000e+00 1341
7 TraesCS6A01G070900 chr6D 95.326 706 32 1 77 781 338920329 338921034 0.000000e+00 1120
8 TraesCS6A01G070900 chr6D 80.159 1255 169 36 927 2138 34508035 34509252 0.000000e+00 865
9 TraesCS6A01G070900 chr6B 95.105 1328 52 6 825 2150 71226492 71227808 0.000000e+00 2080
10 TraesCS6A01G070900 chr6B 87.923 1242 111 15 927 2153 71197836 71199053 0.000000e+00 1426
11 TraesCS6A01G070900 chr6B 81.589 1347 144 49 927 2216 71262071 71263370 0.000000e+00 1018
12 TraesCS6A01G070900 chr6B 83.399 506 54 18 2252 2745 71227987 71228474 3.010000e-120 442
13 TraesCS6A01G070900 chr3A 96.176 706 25 2 77 781 746980357 746979653 0.000000e+00 1153
14 TraesCS6A01G070900 chr4D 96.165 704 27 0 77 780 469445173 469444470 0.000000e+00 1151
15 TraesCS6A01G070900 chr2D 95.763 708 30 0 77 784 308682077 308681370 0.000000e+00 1142
16 TraesCS6A01G070900 chr2D 95.339 708 33 0 77 784 308678646 308677939 0.000000e+00 1125
17 TraesCS6A01G070900 chr2D 80.488 246 26 11 2910 3135 181304341 181304098 5.650000e-38 169
18 TraesCS6A01G070900 chr2D 92.857 98 4 3 1 96 44012869 44012773 4.430000e-29 139
19 TraesCS6A01G070900 chr2B 95.892 706 28 1 77 781 793363623 793364328 0.000000e+00 1142
20 TraesCS6A01G070900 chr2B 95.467 706 29 3 77 781 390802869 390802166 0.000000e+00 1123
21 TraesCS6A01G070900 chr1A 95.455 704 32 0 77 780 213936331 213937034 0.000000e+00 1123
22 TraesCS6A01G070900 chr7B 78.643 899 121 35 942 1826 592777431 592776590 6.250000e-147 531
23 TraesCS6A01G070900 chr7B 81.651 218 24 9 2940 3142 303164434 303164650 2.030000e-37 167
24 TraesCS6A01G070900 chr7D 78.216 863 122 36 988 1841 549128071 549127266 2.950000e-135 492
25 TraesCS6A01G070900 chr7D 96.552 87 3 0 1 87 271964398 271964484 9.520000e-31 145
26 TraesCS6A01G070900 chr7D 93.684 95 5 1 1 95 544091961 544092054 1.230000e-29 141
27 TraesCS6A01G070900 chr4B 83.544 237 23 7 2910 3131 62974342 62974577 1.200000e-49 207
28 TraesCS6A01G070900 chr7A 81.818 220 31 6 2921 3134 225061389 225061605 3.380000e-40 176
29 TraesCS6A01G070900 chr3D 81.172 239 27 10 2910 3132 158361955 158362191 3.380000e-40 176
30 TraesCS6A01G070900 chr3D 92.857 98 4 3 1 96 600519760 600519664 4.430000e-29 139
31 TraesCS6A01G070900 chr5D 98.795 83 1 0 1 83 467406942 467406860 7.360000e-32 148
32 TraesCS6A01G070900 chr5D 98.795 83 1 0 1 83 467410913 467410831 7.360000e-32 148
33 TraesCS6A01G070900 chr1D 97.674 86 2 0 1 86 112381101 112381186 7.360000e-32 148
34 TraesCS6A01G070900 chr2A 79.279 222 34 9 2919 3130 760323702 760323921 9.520000e-31 145
35 TraesCS6A01G070900 chr4A 93.750 96 4 2 1 95 456268784 456268878 3.420000e-30 143
36 TraesCS6A01G070900 chrUn 83.660 153 19 4 2994 3140 31885630 31885478 4.430000e-29 139
37 TraesCS6A01G070900 chrUn 83.660 153 19 4 2994 3140 31896122 31895970 4.430000e-29 139
38 TraesCS6A01G070900 chr5A 91.262 103 7 2 1 102 239158430 239158329 4.430000e-29 139


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G070900 chr6A 38722712 38726003 3291 False 6080.000000 6080 100.000000 1 3292 1 chr6A.!!$F2 3291
1 TraesCS6A01G070900 chr6A 38684509 38685735 1226 False 1413.000000 1413 87.660000 927 2153 1 chr6A.!!$F1 1226
2 TraesCS6A01G070900 chr6A 97696552 97697255 703 True 1146.000000 1146 96.023000 77 780 1 chr6A.!!$R1 703
3 TraesCS6A01G070900 chr6A 38741723 38743067 1344 False 1074.000000 1074 81.857000 927 2255 1 chr6A.!!$F3 1328
4 TraesCS6A01G070900 chr6D 34501878 34509252 7374 False 1536.666667 2322 89.348333 816 3292 3 chr6D.!!$F3 2476
5 TraesCS6A01G070900 chr6D 34430690 34431832 1142 False 1341.000000 1341 87.993000 999 2147 1 chr6D.!!$F1 1148
6 TraesCS6A01G070900 chr6D 338920329 338921034 705 False 1120.000000 1120 95.326000 77 781 1 chr6D.!!$F2 704
7 TraesCS6A01G070900 chr6B 71197836 71199053 1217 False 1426.000000 1426 87.923000 927 2153 1 chr6B.!!$F1 1226
8 TraesCS6A01G070900 chr6B 71226492 71228474 1982 False 1261.000000 2080 89.252000 825 2745 2 chr6B.!!$F3 1920
9 TraesCS6A01G070900 chr6B 71262071 71263370 1299 False 1018.000000 1018 81.589000 927 2216 1 chr6B.!!$F2 1289
10 TraesCS6A01G070900 chr3A 746979653 746980357 704 True 1153.000000 1153 96.176000 77 781 1 chr3A.!!$R1 704
11 TraesCS6A01G070900 chr4D 469444470 469445173 703 True 1151.000000 1151 96.165000 77 780 1 chr4D.!!$R1 703
12 TraesCS6A01G070900 chr2D 308677939 308682077 4138 True 1133.500000 1142 95.551000 77 784 2 chr2D.!!$R3 707
13 TraesCS6A01G070900 chr2B 793363623 793364328 705 False 1142.000000 1142 95.892000 77 781 1 chr2B.!!$F1 704
14 TraesCS6A01G070900 chr2B 390802166 390802869 703 True 1123.000000 1123 95.467000 77 781 1 chr2B.!!$R1 704
15 TraesCS6A01G070900 chr1A 213936331 213937034 703 False 1123.000000 1123 95.455000 77 780 1 chr1A.!!$F1 703
16 TraesCS6A01G070900 chr7B 592776590 592777431 841 True 531.000000 531 78.643000 942 1826 1 chr7B.!!$R1 884
17 TraesCS6A01G070900 chr7D 549127266 549128071 805 True 492.000000 492 78.216000 988 1841 1 chr7D.!!$R1 853

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
863 4295 0.182537 TGGGGACTTGTGGTGTCTTG 59.817 55.000 0.0 0.0 35.04 3.02 F
1107 4557 1.359475 GGGCCGTCTAGTGATCGTC 59.641 63.158 0.0 0.0 0.00 4.20 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1837 5326 0.249573 GTCGGACGAAGAAACCACCA 60.250 55.0 0.00 0.0 0.00 4.17 R
2798 6433 0.254178 GGGCTGATGTGGTGTCATCT 59.746 55.0 7.92 0.0 43.03 2.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.592485 CCTCGTTGCTAGATTACTCCAT 57.408 45.455 0.00 0.00 0.00 3.41
22 23 5.707242 CCTCGTTGCTAGATTACTCCATA 57.293 43.478 0.00 0.00 0.00 2.74
23 24 5.704888 CCTCGTTGCTAGATTACTCCATAG 58.295 45.833 0.00 0.00 0.00 2.23
24 25 5.473846 CCTCGTTGCTAGATTACTCCATAGA 59.526 44.000 0.00 0.00 0.00 1.98
25 26 6.151985 CCTCGTTGCTAGATTACTCCATAGAT 59.848 42.308 0.00 0.00 0.00 1.98
26 27 7.309499 CCTCGTTGCTAGATTACTCCATAGATT 60.309 40.741 0.00 0.00 0.00 2.40
27 28 7.371159 TCGTTGCTAGATTACTCCATAGATTG 58.629 38.462 0.00 0.00 0.00 2.67
28 29 7.230712 TCGTTGCTAGATTACTCCATAGATTGA 59.769 37.037 0.00 0.00 0.00 2.57
29 30 8.031864 CGTTGCTAGATTACTCCATAGATTGAT 58.968 37.037 0.00 0.00 0.00 2.57
30 31 9.364989 GTTGCTAGATTACTCCATAGATTGATC 57.635 37.037 0.00 0.00 0.00 2.92
31 32 8.891985 TGCTAGATTACTCCATAGATTGATCT 57.108 34.615 0.00 0.00 40.86 2.75
32 33 9.319060 TGCTAGATTACTCCATAGATTGATCTT 57.681 33.333 0.00 0.00 38.32 2.40
33 34 9.585099 GCTAGATTACTCCATAGATTGATCTTG 57.415 37.037 0.00 0.00 38.32 3.02
35 36 8.503428 AGATTACTCCATAGATTGATCTTGGT 57.497 34.615 15.48 6.45 38.32 3.67
36 37 8.373981 AGATTACTCCATAGATTGATCTTGGTG 58.626 37.037 15.48 15.28 38.32 4.17
37 38 7.675161 TTACTCCATAGATTGATCTTGGTGA 57.325 36.000 19.38 6.63 38.32 4.02
38 39 6.760440 ACTCCATAGATTGATCTTGGTGAT 57.240 37.500 19.38 0.00 38.32 3.06
39 40 6.531923 ACTCCATAGATTGATCTTGGTGATG 58.468 40.000 19.38 10.22 38.32 3.07
40 41 5.311265 TCCATAGATTGATCTTGGTGATGC 58.689 41.667 15.48 0.00 38.32 3.91
41 42 4.153655 CCATAGATTGATCTTGGTGATGCG 59.846 45.833 0.00 0.00 38.32 4.73
42 43 3.272574 AGATTGATCTTGGTGATGCGT 57.727 42.857 0.00 0.00 35.14 5.24
43 44 4.406648 AGATTGATCTTGGTGATGCGTA 57.593 40.909 0.00 0.00 35.14 4.42
44 45 4.375272 AGATTGATCTTGGTGATGCGTAG 58.625 43.478 0.00 0.00 35.14 3.51
45 46 2.602257 TGATCTTGGTGATGCGTAGG 57.398 50.000 0.00 0.00 35.14 3.18
46 47 2.107366 TGATCTTGGTGATGCGTAGGA 58.893 47.619 0.00 0.00 35.14 2.94
47 48 2.499693 TGATCTTGGTGATGCGTAGGAA 59.500 45.455 0.00 0.00 35.14 3.36
48 49 3.055458 TGATCTTGGTGATGCGTAGGAAA 60.055 43.478 0.00 0.00 35.14 3.13
49 50 3.627395 TCTTGGTGATGCGTAGGAAAT 57.373 42.857 0.00 0.00 0.00 2.17
50 51 3.950397 TCTTGGTGATGCGTAGGAAATT 58.050 40.909 0.00 0.00 0.00 1.82
51 52 4.331968 TCTTGGTGATGCGTAGGAAATTT 58.668 39.130 0.00 0.00 0.00 1.82
52 53 4.764823 TCTTGGTGATGCGTAGGAAATTTT 59.235 37.500 0.00 0.00 0.00 1.82
53 54 4.433186 TGGTGATGCGTAGGAAATTTTG 57.567 40.909 0.00 0.00 0.00 2.44
54 55 4.075682 TGGTGATGCGTAGGAAATTTTGA 58.924 39.130 0.00 0.00 0.00 2.69
55 56 4.520874 TGGTGATGCGTAGGAAATTTTGAA 59.479 37.500 0.00 0.00 0.00 2.69
56 57 5.184864 TGGTGATGCGTAGGAAATTTTGAAT 59.815 36.000 0.00 0.00 0.00 2.57
57 58 6.099341 GGTGATGCGTAGGAAATTTTGAATT 58.901 36.000 0.00 0.00 0.00 2.17
58 59 6.589907 GGTGATGCGTAGGAAATTTTGAATTT 59.410 34.615 0.00 0.00 0.00 1.82
59 60 7.201435 GGTGATGCGTAGGAAATTTTGAATTTC 60.201 37.037 14.63 14.63 37.31 2.17
60 61 7.542130 GTGATGCGTAGGAAATTTTGAATTTCT 59.458 33.333 19.63 11.71 37.94 2.52
61 62 7.541783 TGATGCGTAGGAAATTTTGAATTTCTG 59.458 33.333 19.63 11.73 37.94 3.02
62 63 5.633182 TGCGTAGGAAATTTTGAATTTCTGC 59.367 36.000 19.63 17.87 37.94 4.26
63 64 5.863935 GCGTAGGAAATTTTGAATTTCTGCT 59.136 36.000 19.63 13.91 37.94 4.24
64 65 7.027161 GCGTAGGAAATTTTGAATTTCTGCTA 58.973 34.615 19.63 13.20 37.94 3.49
65 66 7.008357 GCGTAGGAAATTTTGAATTTCTGCTAC 59.992 37.037 19.63 19.48 37.94 3.58
66 67 7.216317 CGTAGGAAATTTTGAATTTCTGCTACG 59.784 37.037 26.94 26.94 42.40 3.51
67 68 6.981722 AGGAAATTTTGAATTTCTGCTACGT 58.018 32.000 19.63 0.00 37.94 3.57
68 69 7.433680 AGGAAATTTTGAATTTCTGCTACGTT 58.566 30.769 19.63 0.00 37.94 3.99
69 70 7.595130 AGGAAATTTTGAATTTCTGCTACGTTC 59.405 33.333 19.63 5.94 37.94 3.95
70 71 7.148804 GGAAATTTTGAATTTCTGCTACGTTCC 60.149 37.037 19.63 3.19 37.94 3.62
71 72 4.759516 TTTGAATTTCTGCTACGTTCCC 57.240 40.909 0.00 0.00 0.00 3.97
72 73 2.706890 TGAATTTCTGCTACGTTCCCC 58.293 47.619 0.00 0.00 0.00 4.81
73 74 2.039216 TGAATTTCTGCTACGTTCCCCA 59.961 45.455 0.00 0.00 0.00 4.96
74 75 2.871096 ATTTCTGCTACGTTCCCCAA 57.129 45.000 0.00 0.00 0.00 4.12
75 76 1.886886 TTTCTGCTACGTTCCCCAAC 58.113 50.000 0.00 0.00 0.00 3.77
602 4034 7.029563 CACTTAGCTTGCGATTTTCCTATTTT 58.970 34.615 0.00 0.00 0.00 1.82
687 4119 8.680903 GCTAGATTTTCCTTCATTTCTGATTGA 58.319 33.333 0.00 0.00 0.00 2.57
715 4147 6.238731 CGAGGAACCACATAATGCAATTGTAT 60.239 38.462 7.40 5.10 36.99 2.29
799 4231 3.704800 AACCTAGGAAAGAGGAGTTGC 57.295 47.619 17.98 0.00 37.53 4.17
800 4232 1.909986 ACCTAGGAAAGAGGAGTTGCC 59.090 52.381 17.98 0.00 37.53 4.52
801 4233 1.134670 CCTAGGAAAGAGGAGTTGCCG 60.135 57.143 1.05 0.00 43.43 5.69
802 4234 1.550976 CTAGGAAAGAGGAGTTGCCGT 59.449 52.381 0.00 0.00 43.43 5.68
803 4235 1.640917 AGGAAAGAGGAGTTGCCGTA 58.359 50.000 0.00 0.00 43.43 4.02
804 4236 1.975680 AGGAAAGAGGAGTTGCCGTAA 59.024 47.619 0.00 0.00 43.43 3.18
805 4237 2.370849 AGGAAAGAGGAGTTGCCGTAAA 59.629 45.455 0.00 0.00 43.43 2.01
806 4238 2.742589 GGAAAGAGGAGTTGCCGTAAAG 59.257 50.000 0.00 0.00 43.43 1.85
807 4239 3.556423 GGAAAGAGGAGTTGCCGTAAAGA 60.556 47.826 0.00 0.00 43.43 2.52
808 4240 3.320673 AAGAGGAGTTGCCGTAAAGAG 57.679 47.619 0.00 0.00 43.43 2.85
809 4241 1.550976 AGAGGAGTTGCCGTAAAGAGG 59.449 52.381 0.00 0.00 43.43 3.69
810 4242 1.549170 GAGGAGTTGCCGTAAAGAGGA 59.451 52.381 0.00 0.00 43.43 3.71
811 4243 1.975680 AGGAGTTGCCGTAAAGAGGAA 59.024 47.619 0.00 0.00 43.43 3.36
812 4244 2.028020 AGGAGTTGCCGTAAAGAGGAAG 60.028 50.000 0.00 0.00 43.43 3.46
813 4245 2.028385 GGAGTTGCCGTAAAGAGGAAGA 60.028 50.000 0.00 0.00 0.00 2.87
814 4246 3.556423 GGAGTTGCCGTAAAGAGGAAGAA 60.556 47.826 0.00 0.00 0.00 2.52
863 4295 0.182537 TGGGGACTTGTGGTGTCTTG 59.817 55.000 0.00 0.00 35.04 3.02
879 4311 5.284079 GTGTCTTGTTGTCATTGCAATTCT 58.716 37.500 9.83 0.00 0.00 2.40
887 4319 7.686519 TGTTGTCATTGCAATTCTTTTTCAAG 58.313 30.769 9.83 0.00 0.00 3.02
1107 4557 1.359475 GGGCCGTCTAGTGATCGTC 59.641 63.158 0.00 0.00 0.00 4.20
1581 5058 2.969238 CCGAGCGACATGATGGCC 60.969 66.667 0.00 0.00 30.97 5.36
1837 5326 2.125673 CGCGACGGAGGGAACATT 60.126 61.111 0.00 0.00 0.00 2.71
1934 5441 2.408271 TCCGATTCATTTGAGCTGCT 57.592 45.000 0.00 0.00 0.00 4.24
1997 5522 0.034863 GACGGGGGCAAGAATACCAA 60.035 55.000 0.00 0.00 0.00 3.67
2179 5744 7.522073 GCCAGTTCTTGTGATGTTCAGAAATAA 60.522 37.037 0.00 0.00 28.89 1.40
2180 5745 8.352201 CCAGTTCTTGTGATGTTCAGAAATAAA 58.648 33.333 0.00 0.00 28.89 1.40
2181 5746 9.903682 CAGTTCTTGTGATGTTCAGAAATAAAT 57.096 29.630 0.00 0.00 28.89 1.40
2191 5756 9.890352 GATGTTCAGAAATAAATATCTGCCTTC 57.110 33.333 0.00 0.00 42.21 3.46
2229 5802 7.681939 AACTGTCTGTTCACAAGAGTTAAAA 57.318 32.000 0.00 0.00 32.63 1.52
2304 5917 3.411446 TGTTGCTCACCCACTTTATGAG 58.589 45.455 0.00 0.00 42.33 2.90
2305 5918 3.072330 TGTTGCTCACCCACTTTATGAGA 59.928 43.478 4.70 0.00 42.07 3.27
2306 5919 3.616956 TGCTCACCCACTTTATGAGAG 57.383 47.619 4.70 0.00 42.07 3.20
2307 5920 2.284190 GCTCACCCACTTTATGAGAGC 58.716 52.381 4.70 0.00 42.07 4.09
2308 5921 2.355108 GCTCACCCACTTTATGAGAGCA 60.355 50.000 0.00 0.00 42.07 4.26
2309 5922 3.529533 CTCACCCACTTTATGAGAGCAG 58.470 50.000 0.00 0.00 42.07 4.24
2336 5949 1.335233 CGTGCAGTGTCATTTGTGCAT 60.335 47.619 0.00 0.00 46.93 3.96
2349 5962 6.580041 GTCATTTGTGCATAACAGAAGAGTTG 59.420 38.462 0.00 0.00 40.74 3.16
2350 5963 6.262944 TCATTTGTGCATAACAGAAGAGTTGT 59.737 34.615 0.00 0.00 40.74 3.32
2351 5964 6.449635 TTTGTGCATAACAGAAGAGTTGTT 57.550 33.333 0.00 0.00 40.74 2.83
2353 5966 4.275689 TGTGCATAACAGAAGAGTTGTTGG 59.724 41.667 0.00 0.00 39.03 3.77
2354 5967 4.515191 GTGCATAACAGAAGAGTTGTTGGA 59.485 41.667 0.00 0.00 39.03 3.53
2357 5970 5.334414 GCATAACAGAAGAGTTGTTGGAGTG 60.334 44.000 1.18 0.00 39.03 3.51
2358 5971 2.565841 ACAGAAGAGTTGTTGGAGTGC 58.434 47.619 0.00 0.00 0.00 4.40
2359 5972 2.171448 ACAGAAGAGTTGTTGGAGTGCT 59.829 45.455 0.00 0.00 0.00 4.40
2387 6005 5.323371 TCTTTTCTTTTGCGAATATGGGG 57.677 39.130 0.00 0.00 0.00 4.96
2425 6043 6.111382 TGAACTGCTCATCTTTTCTAGGATG 58.889 40.000 0.00 0.00 40.23 3.51
2442 6060 0.395311 ATGCCATGGCCTCAAGTCTG 60.395 55.000 33.44 0.00 41.09 3.51
2463 6081 1.407258 CTTGAAAAGGCAACGGGTGAA 59.593 47.619 0.00 0.00 41.27 3.18
2478 6098 2.806608 GTGAACGTCCACCTGAACTA 57.193 50.000 0.00 0.00 0.00 2.24
2487 6107 4.392138 CGTCCACCTGAACTAAATTCCTTC 59.608 45.833 0.00 0.00 36.36 3.46
2517 6137 1.135315 CACAAGCACAATCAATCCCCG 60.135 52.381 0.00 0.00 0.00 5.73
2566 6186 4.700213 ACATCTTACTGTACAATTGCACCC 59.300 41.667 5.05 0.00 0.00 4.61
2586 6206 5.587844 CACCCTTTCTTCATAGATGAGTTGG 59.412 44.000 0.00 0.00 38.19 3.77
2607 6227 1.331138 CTCTCGGCTAGGTTGACGTAG 59.669 57.143 6.52 6.52 39.83 3.51
2615 6250 2.701073 AGGTTGACGTAGACTGTTCG 57.299 50.000 0.00 0.00 0.00 3.95
2663 6298 2.532715 AAGAGGGCCCTGGCTGAA 60.533 61.111 34.59 0.00 41.60 3.02
2751 6386 2.618053 CACCAATCCCACTAACGTCTC 58.382 52.381 0.00 0.00 0.00 3.36
2762 6397 4.324267 CACTAACGTCTCCCCTTGAATTT 58.676 43.478 0.00 0.00 0.00 1.82
2769 6404 5.053145 CGTCTCCCCTTGAATTTCTCTATG 58.947 45.833 0.00 0.00 0.00 2.23
2798 6433 2.559668 CACTAAGTCACTAACCCGACCA 59.440 50.000 0.00 0.00 32.33 4.02
2805 6440 1.548719 CACTAACCCGACCAGATGACA 59.451 52.381 0.00 0.00 0.00 3.58
2810 6445 1.671166 CCGACCAGATGACACCACA 59.329 57.895 0.00 0.00 0.00 4.17
2846 6481 1.104630 CTCCGTGACTAAGGGACTCC 58.895 60.000 0.00 0.00 38.49 3.85
2867 6502 4.339247 TCCTTTCTTTTGCTGGAAAGTGAG 59.661 41.667 12.39 10.39 43.79 3.51
2917 6555 9.933723 AATGAGAGAATAAGAAAAACCCAAATG 57.066 29.630 0.00 0.00 0.00 2.32
2918 6556 8.704849 TGAGAGAATAAGAAAAACCCAAATGA 57.295 30.769 0.00 0.00 0.00 2.57
2919 6557 9.312904 TGAGAGAATAAGAAAAACCCAAATGAT 57.687 29.630 0.00 0.00 0.00 2.45
2932 6570 4.764823 ACCCAAATGATAATGTCACACGTT 59.235 37.500 0.00 0.00 40.28 3.99
2961 6599 1.598685 CACACCGGCCCTAACGTTT 60.599 57.895 5.91 0.00 0.00 3.60
3057 6699 2.335316 AACTAAAGTTGCCGTCCACA 57.665 45.000 0.00 0.00 36.80 4.17
3061 6703 1.398692 AAAGTTGCCGTCCACACATT 58.601 45.000 0.00 0.00 0.00 2.71
3087 6729 8.831715 ACTTAACTTGCCATAAAAATTTGGAG 57.168 30.769 0.00 0.00 34.81 3.86
3096 6738 6.650390 GCCATAAAAATTTGGAGTTGTCATGT 59.350 34.615 0.00 0.00 34.81 3.21
3136 6778 5.934402 GACACTTATCAGGGTCCTAAGAA 57.066 43.478 0.00 0.00 46.65 2.52
3147 6789 8.814448 TCAGGGTCCTAAGAAAAATATAGGAT 57.186 34.615 4.24 0.00 45.10 3.24
3188 6830 1.298602 GCAGGCTTTTGGGTTGTTTG 58.701 50.000 0.00 0.00 0.00 2.93
3212 6854 8.662781 TGATTGCATTCTATGAAAGTAGTACC 57.337 34.615 9.81 0.00 29.66 3.34
3266 6908 5.930837 TCAATCCTTTGAACCAAACAACT 57.069 34.783 0.00 0.00 38.90 3.16
3267 6909 7.411486 TTCAATCCTTTGAACCAAACAACTA 57.589 32.000 0.00 0.00 44.81 2.24
3271 6913 8.940952 CAATCCTTTGAACCAAACAACTAAAAA 58.059 29.630 0.00 0.00 34.60 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.592485 ATGGAGTAATCTAGCAACGAGG 57.408 45.455 0.00 0.00 0.00 4.63
2 3 7.230712 TCAATCTATGGAGTAATCTAGCAACGA 59.769 37.037 0.00 0.00 0.00 3.85
4 5 9.364989 GATCAATCTATGGAGTAATCTAGCAAC 57.635 37.037 0.00 0.00 0.00 4.17
5 6 9.319060 AGATCAATCTATGGAGTAATCTAGCAA 57.681 33.333 0.00 0.00 34.85 3.91
6 7 8.891985 AGATCAATCTATGGAGTAATCTAGCA 57.108 34.615 0.00 0.00 34.85 3.49
7 8 9.585099 CAAGATCAATCTATGGAGTAATCTAGC 57.415 37.037 0.00 0.00 35.76 3.42
9 10 9.607333 ACCAAGATCAATCTATGGAGTAATCTA 57.393 33.333 19.34 0.00 37.92 1.98
10 11 8.373981 CACCAAGATCAATCTATGGAGTAATCT 58.626 37.037 19.34 0.00 37.92 2.40
11 12 8.370940 TCACCAAGATCAATCTATGGAGTAATC 58.629 37.037 19.34 0.00 37.92 1.75
12 13 8.267620 TCACCAAGATCAATCTATGGAGTAAT 57.732 34.615 19.34 3.63 37.92 1.89
13 14 7.675161 TCACCAAGATCAATCTATGGAGTAA 57.325 36.000 19.34 6.75 37.92 2.24
14 15 7.674120 CATCACCAAGATCAATCTATGGAGTA 58.326 38.462 19.34 10.06 37.92 2.59
15 16 6.531923 CATCACCAAGATCAATCTATGGAGT 58.468 40.000 19.34 8.56 37.92 3.85
16 17 5.411977 GCATCACCAAGATCAATCTATGGAG 59.588 44.000 19.34 14.57 37.92 3.86
17 18 5.311265 GCATCACCAAGATCAATCTATGGA 58.689 41.667 19.34 6.96 37.92 3.41
18 19 4.153655 CGCATCACCAAGATCAATCTATGG 59.846 45.833 14.46 14.46 39.18 2.74
19 20 4.753610 ACGCATCACCAAGATCAATCTATG 59.246 41.667 0.00 0.00 35.76 2.23
20 21 4.965814 ACGCATCACCAAGATCAATCTAT 58.034 39.130 0.00 0.00 35.76 1.98
21 22 4.406648 ACGCATCACCAAGATCAATCTA 57.593 40.909 0.00 0.00 35.76 1.98
22 23 3.272574 ACGCATCACCAAGATCAATCT 57.727 42.857 0.00 0.00 39.22 2.40
23 24 3.496130 CCTACGCATCACCAAGATCAATC 59.504 47.826 0.00 0.00 33.72 2.67
24 25 3.134623 TCCTACGCATCACCAAGATCAAT 59.865 43.478 0.00 0.00 33.72 2.57
25 26 2.499693 TCCTACGCATCACCAAGATCAA 59.500 45.455 0.00 0.00 33.72 2.57
26 27 2.107366 TCCTACGCATCACCAAGATCA 58.893 47.619 0.00 0.00 33.72 2.92
27 28 2.890808 TCCTACGCATCACCAAGATC 57.109 50.000 0.00 0.00 33.72 2.75
28 29 3.627395 TTTCCTACGCATCACCAAGAT 57.373 42.857 0.00 0.00 37.48 2.40
29 30 3.627395 ATTTCCTACGCATCACCAAGA 57.373 42.857 0.00 0.00 0.00 3.02
30 31 4.701956 AAATTTCCTACGCATCACCAAG 57.298 40.909 0.00 0.00 0.00 3.61
31 32 4.520874 TCAAAATTTCCTACGCATCACCAA 59.479 37.500 0.00 0.00 0.00 3.67
32 33 4.075682 TCAAAATTTCCTACGCATCACCA 58.924 39.130 0.00 0.00 0.00 4.17
33 34 4.695217 TCAAAATTTCCTACGCATCACC 57.305 40.909 0.00 0.00 0.00 4.02
34 35 7.542130 AGAAATTCAAAATTTCCTACGCATCAC 59.458 33.333 17.26 0.00 38.44 3.06
35 36 7.541783 CAGAAATTCAAAATTTCCTACGCATCA 59.458 33.333 17.26 0.00 38.44 3.07
36 37 7.463251 GCAGAAATTCAAAATTTCCTACGCATC 60.463 37.037 17.26 0.00 38.44 3.91
37 38 6.311200 GCAGAAATTCAAAATTTCCTACGCAT 59.689 34.615 17.26 0.29 38.44 4.73
38 39 5.633182 GCAGAAATTCAAAATTTCCTACGCA 59.367 36.000 17.26 0.00 38.44 5.24
39 40 5.863935 AGCAGAAATTCAAAATTTCCTACGC 59.136 36.000 17.26 14.96 38.44 4.42
40 41 7.216317 CGTAGCAGAAATTCAAAATTTCCTACG 59.784 37.037 26.70 26.70 38.44 3.51
41 42 8.021396 ACGTAGCAGAAATTCAAAATTTCCTAC 58.979 33.333 17.26 18.31 38.44 3.18
42 43 8.106247 ACGTAGCAGAAATTCAAAATTTCCTA 57.894 30.769 17.26 11.64 38.44 2.94
43 44 6.981722 ACGTAGCAGAAATTCAAAATTTCCT 58.018 32.000 17.26 12.37 38.44 3.36
44 45 7.148804 GGAACGTAGCAGAAATTCAAAATTTCC 60.149 37.037 17.26 7.18 38.44 3.13
45 46 7.148804 GGGAACGTAGCAGAAATTCAAAATTTC 60.149 37.037 14.41 14.41 38.07 2.17
46 47 6.645003 GGGAACGTAGCAGAAATTCAAAATTT 59.355 34.615 0.00 0.00 0.00 1.82
47 48 6.156519 GGGAACGTAGCAGAAATTCAAAATT 58.843 36.000 0.00 0.00 0.00 1.82
48 49 5.336451 GGGGAACGTAGCAGAAATTCAAAAT 60.336 40.000 0.00 0.00 0.00 1.82
49 50 4.022676 GGGGAACGTAGCAGAAATTCAAAA 60.023 41.667 0.00 0.00 0.00 2.44
50 51 3.504520 GGGGAACGTAGCAGAAATTCAAA 59.495 43.478 0.00 0.00 0.00 2.69
51 52 3.078837 GGGGAACGTAGCAGAAATTCAA 58.921 45.455 0.00 0.00 0.00 2.69
52 53 2.039216 TGGGGAACGTAGCAGAAATTCA 59.961 45.455 0.00 0.00 0.00 2.57
53 54 2.706890 TGGGGAACGTAGCAGAAATTC 58.293 47.619 0.00 0.00 0.00 2.17
54 55 2.817844 GTTGGGGAACGTAGCAGAAATT 59.182 45.455 0.00 0.00 0.00 1.82
55 56 2.224670 TGTTGGGGAACGTAGCAGAAAT 60.225 45.455 0.00 0.00 0.00 2.17
56 57 1.141254 TGTTGGGGAACGTAGCAGAAA 59.859 47.619 0.00 0.00 0.00 2.52
57 58 0.759959 TGTTGGGGAACGTAGCAGAA 59.240 50.000 0.00 0.00 0.00 3.02
58 59 0.981183 ATGTTGGGGAACGTAGCAGA 59.019 50.000 0.00 0.00 0.00 4.26
59 60 1.821216 AATGTTGGGGAACGTAGCAG 58.179 50.000 0.00 0.00 0.00 4.24
60 61 3.275143 CATAATGTTGGGGAACGTAGCA 58.725 45.455 0.00 0.00 0.00 3.49
61 62 2.616842 CCATAATGTTGGGGAACGTAGC 59.383 50.000 0.00 0.00 32.80 3.58
71 72 4.909696 TTACGAATGCCCATAATGTTGG 57.090 40.909 0.00 0.00 36.46 3.77
72 73 5.686841 CACATTACGAATGCCCATAATGTTG 59.313 40.000 5.88 0.62 42.71 3.33
73 74 5.735922 GCACATTACGAATGCCCATAATGTT 60.736 40.000 5.88 0.00 42.71 2.71
74 75 4.261572 GCACATTACGAATGCCCATAATGT 60.262 41.667 3.27 3.27 44.94 2.71
75 76 4.229096 GCACATTACGAATGCCCATAATG 58.771 43.478 0.00 0.00 42.69 1.90
171 172 5.072055 CCCATGGATATCTGTTGTGCATTA 58.928 41.667 15.22 0.00 0.00 1.90
201 202 8.026607 GCATTAACAAAATTGGCAGTTAGAGTA 58.973 33.333 0.00 0.00 0.00 2.59
202 203 6.868339 GCATTAACAAAATTGGCAGTTAGAGT 59.132 34.615 0.00 0.00 0.00 3.24
554 555 7.333921 AGTGAAAACAGTCATCAAAAATTGCAA 59.666 29.630 0.00 0.00 0.00 4.08
602 4034 9.684448 CTTCTCTATTACAATGCTCGAATCTAA 57.316 33.333 0.00 0.00 0.00 2.10
687 4119 3.884895 TGCATTATGTGGTTCCTCGAAT 58.115 40.909 0.00 0.00 0.00 3.34
715 4147 9.559732 AATCATTACATCGTTTATGAGGATTGA 57.440 29.630 0.00 0.00 39.07 2.57
781 4213 1.134670 CGGCAACTCCTCTTTCCTAGG 60.135 57.143 0.82 0.82 35.26 3.02
784 4216 1.640917 TACGGCAACTCCTCTTTCCT 58.359 50.000 0.00 0.00 0.00 3.36
785 4217 2.467566 TTACGGCAACTCCTCTTTCC 57.532 50.000 0.00 0.00 0.00 3.13
786 4218 3.660865 TCTTTACGGCAACTCCTCTTTC 58.339 45.455 0.00 0.00 0.00 2.62
787 4219 3.557264 CCTCTTTACGGCAACTCCTCTTT 60.557 47.826 0.00 0.00 0.00 2.52
788 4220 2.028020 CCTCTTTACGGCAACTCCTCTT 60.028 50.000 0.00 0.00 0.00 2.85
789 4221 1.550976 CCTCTTTACGGCAACTCCTCT 59.449 52.381 0.00 0.00 0.00 3.69
790 4222 1.549170 TCCTCTTTACGGCAACTCCTC 59.451 52.381 0.00 0.00 0.00 3.71
791 4223 1.640917 TCCTCTTTACGGCAACTCCT 58.359 50.000 0.00 0.00 0.00 3.69
792 4224 2.028385 TCTTCCTCTTTACGGCAACTCC 60.028 50.000 0.00 0.00 0.00 3.85
793 4225 3.314541 TCTTCCTCTTTACGGCAACTC 57.685 47.619 0.00 0.00 0.00 3.01
794 4226 3.764237 TTCTTCCTCTTTACGGCAACT 57.236 42.857 0.00 0.00 0.00 3.16
795 4227 3.058432 GGTTTCTTCCTCTTTACGGCAAC 60.058 47.826 0.00 0.00 0.00 4.17
796 4228 3.143728 GGTTTCTTCCTCTTTACGGCAA 58.856 45.455 0.00 0.00 0.00 4.52
797 4229 2.370849 AGGTTTCTTCCTCTTTACGGCA 59.629 45.455 0.00 0.00 31.32 5.69
798 4230 2.742589 CAGGTTTCTTCCTCTTTACGGC 59.257 50.000 0.00 0.00 35.37 5.68
799 4231 3.746492 CACAGGTTTCTTCCTCTTTACGG 59.254 47.826 0.00 0.00 35.37 4.02
800 4232 3.746492 CCACAGGTTTCTTCCTCTTTACG 59.254 47.826 0.00 0.00 35.37 3.18
801 4233 4.515567 CACCACAGGTTTCTTCCTCTTTAC 59.484 45.833 0.00 0.00 35.37 2.01
802 4234 4.410883 TCACCACAGGTTTCTTCCTCTTTA 59.589 41.667 0.00 0.00 35.37 1.85
803 4235 3.202151 TCACCACAGGTTTCTTCCTCTTT 59.798 43.478 0.00 0.00 35.37 2.52
804 4236 2.777692 TCACCACAGGTTTCTTCCTCTT 59.222 45.455 0.00 0.00 35.37 2.85
805 4237 2.408565 TCACCACAGGTTTCTTCCTCT 58.591 47.619 0.00 0.00 35.37 3.69
806 4238 2.930826 TCACCACAGGTTTCTTCCTC 57.069 50.000 0.00 0.00 35.37 3.71
807 4239 3.662759 TTTCACCACAGGTTTCTTCCT 57.337 42.857 0.00 0.00 38.51 3.36
808 4240 4.937201 AATTTCACCACAGGTTTCTTCC 57.063 40.909 0.00 0.00 31.02 3.46
809 4241 6.337356 TGAAAATTTCACCACAGGTTTCTTC 58.663 36.000 4.03 0.00 34.08 2.87
810 4242 6.293004 TGAAAATTTCACCACAGGTTTCTT 57.707 33.333 4.03 0.00 34.08 2.52
811 4243 5.930837 TGAAAATTTCACCACAGGTTTCT 57.069 34.783 4.03 0.00 34.08 2.52
812 4244 6.255670 GTCTTGAAAATTTCACCACAGGTTTC 59.744 38.462 8.06 0.00 39.87 2.78
813 4245 6.106003 GTCTTGAAAATTTCACCACAGGTTT 58.894 36.000 8.06 0.00 39.87 3.27
814 4246 5.660460 GTCTTGAAAATTTCACCACAGGTT 58.340 37.500 8.06 0.00 39.87 3.50
863 4295 7.847564 GTCTTGAAAAAGAATTGCAATGACAAC 59.152 33.333 13.82 3.03 31.03 3.32
879 4311 6.096036 TGCGATGACTTTTTGTCTTGAAAAA 58.904 32.000 0.00 0.00 45.54 1.94
887 4319 3.244976 CCCATTGCGATGACTTTTTGTC 58.755 45.455 15.98 0.00 45.54 3.18
1120 4570 4.208686 GAAGCCCGCGTCGAGGAT 62.209 66.667 17.36 1.11 0.00 3.24
1581 5058 2.790791 AAGCCTCTCCAGGATCGCG 61.791 63.158 0.00 0.00 43.65 5.87
1697 5186 2.156446 CACCGTAGCGCCTTGTACG 61.156 63.158 17.15 17.15 41.36 3.67
1837 5326 0.249573 GTCGGACGAAGAAACCACCA 60.250 55.000 0.00 0.00 0.00 4.17
2191 5756 1.133253 CAGTTCAGCGTGCCATTCG 59.867 57.895 0.00 0.00 0.00 3.34
2229 5802 5.308976 ACAAATGGGAAGATTGCCTTTTT 57.691 34.783 12.37 6.54 41.70 1.94
2292 5905 3.937706 CTGTTCTGCTCTCATAAAGTGGG 59.062 47.826 0.00 0.00 0.00 4.61
2304 5917 0.598680 ACTGCACGACTGTTCTGCTC 60.599 55.000 10.73 0.00 31.12 4.26
2305 5918 0.877649 CACTGCACGACTGTTCTGCT 60.878 55.000 10.73 0.00 31.12 4.24
2306 5919 1.154205 ACACTGCACGACTGTTCTGC 61.154 55.000 0.00 4.23 0.00 4.26
2307 5920 0.855349 GACACTGCACGACTGTTCTG 59.145 55.000 0.00 0.00 0.00 3.02
2308 5921 0.459899 TGACACTGCACGACTGTTCT 59.540 50.000 0.00 0.00 0.00 3.01
2309 5922 1.502231 ATGACACTGCACGACTGTTC 58.498 50.000 0.00 0.00 0.00 3.18
2336 5949 4.127171 GCACTCCAACAACTCTTCTGTTA 58.873 43.478 0.00 0.00 35.26 2.41
2425 6043 2.413142 GCAGACTTGAGGCCATGGC 61.413 63.158 29.47 29.47 41.06 4.40
2442 6060 0.597377 CACCCGTTGCCTTTTCAAGC 60.597 55.000 0.00 0.00 0.00 4.01
2463 6081 3.326880 AGGAATTTAGTTCAGGTGGACGT 59.673 43.478 0.00 0.00 38.64 4.34
2478 6098 6.759827 GCTTGTGCATGATAATGAAGGAATTT 59.240 34.615 0.00 0.00 39.41 1.82
2566 6186 6.347696 AGAGCCAACTCATCTATGAAGAAAG 58.652 40.000 0.00 0.00 46.09 2.62
2586 6206 1.226717 CGTCAACCTAGCCGAGAGC 60.227 63.158 0.00 0.00 44.25 4.09
2607 6227 3.391049 AGGCTACAGTTTTCGAACAGTC 58.609 45.455 0.00 0.00 0.00 3.51
2615 6250 3.589495 ACGGAGTAGGCTACAGTTTTC 57.411 47.619 25.48 13.78 41.94 2.29
2663 6298 8.534496 AGGTTTAGATTATTGCTGCAGAAATTT 58.466 29.630 25.03 13.14 0.00 1.82
2751 6386 4.464947 GACCCATAGAGAAATTCAAGGGG 58.535 47.826 9.99 9.99 37.58 4.79
2762 6397 3.532232 ACTTAGTGAGGGACCCATAGAGA 59.468 47.826 14.60 0.00 0.00 3.10
2769 6404 1.939980 AGTGACTTAGTGAGGGACCC 58.060 55.000 0.59 0.59 0.00 4.46
2798 6433 0.254178 GGGCTGATGTGGTGTCATCT 59.746 55.000 7.92 0.00 43.03 2.90
2805 6440 1.559682 AGATTTACGGGCTGATGTGGT 59.440 47.619 0.00 0.00 0.00 4.16
2810 6445 2.224066 CGGAGAAGATTTACGGGCTGAT 60.224 50.000 0.00 0.00 0.00 2.90
2867 6502 6.780706 TTTTGAATCGTGAAGAGTCCTTAC 57.219 37.500 0.00 0.00 42.81 2.34
2893 6531 8.704849 TCATTTGGGTTTTTCTTATTCTCTCA 57.295 30.769 0.00 0.00 0.00 3.27
2909 6547 4.331968 ACGTGTGACATTATCATTTGGGT 58.668 39.130 0.00 0.00 40.28 4.51
2912 6550 5.060816 GCCAAACGTGTGACATTATCATTTG 59.939 40.000 7.48 0.00 40.28 2.32
2915 6553 3.755905 TGCCAAACGTGTGACATTATCAT 59.244 39.130 7.48 0.00 40.28 2.45
2916 6554 3.058570 GTGCCAAACGTGTGACATTATCA 60.059 43.478 7.48 0.00 33.79 2.15
2917 6555 3.488489 GTGCCAAACGTGTGACATTATC 58.512 45.455 7.48 0.00 0.00 1.75
2918 6556 3.552604 GTGCCAAACGTGTGACATTAT 57.447 42.857 7.48 0.00 0.00 1.28
2932 6570 3.276091 CGGTGTGCTTCGTGCCAA 61.276 61.111 1.30 0.00 42.00 4.52
2946 6584 4.905240 AAAAACGTTAGGGCCGGT 57.095 50.000 0.00 0.00 0.00 5.28
3009 6651 4.497300 CATGGCAACTTACTTTTGGATGG 58.503 43.478 0.00 0.00 37.61 3.51
3013 6655 3.665745 AGCATGGCAACTTACTTTTGG 57.334 42.857 0.00 0.00 37.61 3.28
3050 6692 4.378046 GGCAAGTTAAGTAATGTGTGGACG 60.378 45.833 0.00 0.00 0.00 4.79
3051 6693 4.517453 TGGCAAGTTAAGTAATGTGTGGAC 59.483 41.667 0.00 0.00 0.00 4.02
3054 6696 9.469807 TTTTTATGGCAAGTTAAGTAATGTGTG 57.530 29.630 0.00 0.00 0.00 3.82
3061 6703 9.921637 CTCCAAATTTTTATGGCAAGTTAAGTA 57.078 29.630 0.00 0.00 36.62 2.24
3081 6723 3.064682 CACGAACACATGACAACTCCAAA 59.935 43.478 0.00 0.00 0.00 3.28
3083 6725 2.209273 CACGAACACATGACAACTCCA 58.791 47.619 0.00 0.00 0.00 3.86
3087 6729 0.660488 TGGCACGAACACATGACAAC 59.340 50.000 0.00 0.00 28.30 3.32
3125 6767 8.445588 TCCAATCCTATATTTTTCTTAGGACCC 58.554 37.037 0.23 0.00 43.15 4.46
3136 6778 9.240734 GAGATGAGCATTCCAATCCTATATTTT 57.759 33.333 0.00 0.00 0.00 1.82
3147 6789 4.204799 CAGGATTGAGATGAGCATTCCAA 58.795 43.478 0.00 0.00 37.94 3.53
3188 6830 8.662781 TGGTACTACTTTCATAGAATGCAATC 57.337 34.615 0.00 0.00 0.00 2.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.