Multiple sequence alignment - TraesCS6A01G070500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G070500 chr6A 100.000 5842 0 0 1 5842 38465674 38471515 0.000000e+00 10789.0
1 TraesCS6A01G070500 chr6A 84.052 232 28 6 601 826 474322224 474322452 1.280000e-51 215.0
2 TraesCS6A01G070500 chr6A 89.474 57 5 1 875 930 38466171 38466227 2.920000e-08 71.3
3 TraesCS6A01G070500 chr6A 89.474 57 5 1 498 554 38466548 38466603 2.920000e-08 71.3
4 TraesCS6A01G070500 chr6B 93.016 4410 183 53 816 5152 71034328 71038685 0.000000e+00 6322.0
5 TraesCS6A01G070500 chr6B 85.602 382 49 4 1 382 71033040 71033415 4.240000e-106 396.0
6 TraesCS6A01G070500 chr6D 91.347 2681 122 45 2532 5148 34339949 34342583 0.000000e+00 3565.0
7 TraesCS6A01G070500 chr6D 90.372 1101 79 10 1478 2561 34338858 34339948 0.000000e+00 1421.0
8 TraesCS6A01G070500 chr6D 96.875 512 14 2 823 1333 34338283 34338793 0.000000e+00 856.0
9 TraesCS6A01G070500 chr6D 87.958 382 43 3 1 382 34336474 34336852 1.150000e-121 448.0
10 TraesCS6A01G070500 chr6D 90.323 279 19 6 5566 5842 34342588 34342860 5.570000e-95 359.0
11 TraesCS6A01G070500 chr6D 89.202 213 17 3 362 574 34336899 34337105 1.610000e-65 261.0
12 TraesCS6A01G070500 chr6D 82.917 240 36 4 592 826 226778520 226778281 1.650000e-50 211.0
13 TraesCS6A01G070500 chr5D 86.988 415 36 13 5153 5551 497836348 497836760 8.930000e-123 451.0
14 TraesCS6A01G070500 chr5D 86.029 408 50 7 5152 5553 472220036 472220442 1.160000e-116 431.0
15 TraesCS6A01G070500 chr5D 82.294 401 56 8 5154 5540 552794571 552794970 3.370000e-87 333.0
16 TraesCS6A01G070500 chr5D 83.402 241 34 4 592 826 275421365 275421605 9.860000e-53 219.0
17 TraesCS6A01G070500 chr7D 86.408 412 38 8 5154 5549 565217824 565217415 8.990000e-118 435.0
18 TraesCS6A01G070500 chr2B 86.341 410 37 11 5153 5549 773936943 773937346 4.180000e-116 429.0
19 TraesCS6A01G070500 chr2B 82.469 405 56 8 5154 5544 772386332 772385929 2.020000e-89 340.0
20 TraesCS6A01G070500 chr2B 85.849 318 29 6 5154 5457 528822706 528823021 2.030000e-84 324.0
21 TraesCS6A01G070500 chr4B 85.854 410 40 10 5153 5549 26484156 26484560 2.520000e-113 420.0
22 TraesCS6A01G070500 chr4B 82.716 243 35 5 589 826 427019899 427019659 5.930000e-50 209.0
23 TraesCS6A01G070500 chr1D 84.738 439 43 16 5154 5573 420844767 420844334 9.050000e-113 418.0
24 TraesCS6A01G070500 chr2D 84.892 417 42 11 5154 5552 616147641 616147228 9.120000e-108 401.0
25 TraesCS6A01G070500 chr2D 82.266 406 60 8 5154 5549 43791664 43792067 2.020000e-89 340.0
26 TraesCS6A01G070500 chrUn 83.544 395 43 11 5194 5571 29282796 29283185 3.350000e-92 350.0
27 TraesCS6A01G070500 chr5B 83.979 387 39 11 5178 5549 285886400 285886022 3.350000e-92 350.0
28 TraesCS6A01G070500 chr5B 86.404 228 26 3 601 823 293952265 293952038 1.630000e-60 244.0
29 TraesCS6A01G070500 chr5B 84.232 241 32 4 592 826 312766085 312766325 4.550000e-56 230.0
30 TraesCS6A01G070500 chr3A 85.948 306 40 3 5154 5457 639507373 639507069 2.030000e-84 324.0
31 TraesCS6A01G070500 chr1A 80.988 405 62 11 5154 5549 536435264 536434866 2.040000e-79 307.0
32 TraesCS6A01G070500 chr7B 84.513 226 28 5 606 826 496968547 496968324 3.550000e-52 217.0
33 TraesCS6A01G070500 chr4D 83.128 243 31 8 592 826 30578335 30578575 4.590000e-51 213.0
34 TraesCS6A01G070500 chr4A 82.988 241 35 4 592 826 14758385 14758145 4.590000e-51 213.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G070500 chr6A 38465674 38471515 5841 False 10789.000000 10789 100.000000 1 5842 1 chr6A.!!$F1 5841
1 TraesCS6A01G070500 chr6B 71033040 71038685 5645 False 3359.000000 6322 89.309000 1 5152 2 chr6B.!!$F1 5151
2 TraesCS6A01G070500 chr6D 34336474 34342860 6386 False 1151.666667 3565 91.012833 1 5842 6 chr6D.!!$F1 5841

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
285 286 0.112606 CCCTACCTCTCTATCCGCCA 59.887 60.000 0.00 0.00 0.00 5.69 F
305 306 0.749818 TCGGGTTGTGCACATGTGTT 60.750 50.000 26.01 0.00 0.00 3.32 F
884 2210 0.842030 AGGTGGTGATCAGGGCTTCA 60.842 55.000 0.00 0.00 0.00 3.02 F
2186 3532 0.678048 GCTTCCGAGTGCCAAAGGAT 60.678 55.000 0.00 0.00 32.19 3.24 F
2489 3835 1.538512 GATGATGCTACCATGCGCATT 59.461 47.619 22.81 10.36 46.06 3.56 F
4127 5550 1.072331 AGGTTGCGTCTGGTCTCATTT 59.928 47.619 0.00 0.00 0.00 2.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1351 2680 0.398318 AAGAACCCTGACAGGCTGAC 59.602 55.000 23.66 16.47 32.73 3.51 R
1354 2683 0.689623 CAGAAGAACCCTGACAGGCT 59.310 55.000 16.72 5.10 32.73 4.58 R
2435 3781 0.178068 AGTTATACACTGGCTGGCCG 59.822 55.000 7.14 4.75 39.42 6.13 R
3192 4570 1.475403 TTTTCAAAACCGCCCAGTGA 58.525 45.000 0.00 0.00 0.00 3.41 R
4276 5699 1.153756 CAGCCCAGGAACAACCCTT 59.846 57.895 0.00 0.00 40.05 3.95 R
5176 6626 0.034186 GTCAATGGGGGTGCAGATGA 60.034 55.000 0.00 0.00 0.00 2.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 2.092753 CACACCTAGCTCCATGTGGAAT 60.093 50.000 13.68 0.00 44.91 3.01
25 26 2.092753 ACACCTAGCTCCATGTGGAATG 60.093 50.000 2.97 0.00 44.91 2.67
32 33 2.420547 GCTCCATGTGGAATGTAGCTCA 60.421 50.000 2.97 0.00 44.91 4.26
49 50 2.526873 AACCACCACGCTCCCTCT 60.527 61.111 0.00 0.00 0.00 3.69
55 56 2.125912 CACGCTCCCTCTCCGTTG 60.126 66.667 0.00 0.00 32.18 4.10
57 58 2.207924 ACGCTCCCTCTCCGTTGTT 61.208 57.895 0.00 0.00 0.00 2.83
58 59 1.738099 CGCTCCCTCTCCGTTGTTG 60.738 63.158 0.00 0.00 0.00 3.33
72 73 2.111932 TTGTTGCACGACACGGCATC 62.112 55.000 0.00 0.00 40.17 3.91
73 74 2.280457 TTGCACGACACGGCATCA 60.280 55.556 0.00 0.00 40.17 3.07
77 78 2.173669 CACGACACGGCATCATCCC 61.174 63.158 0.00 0.00 0.00 3.85
110 111 2.968574 GTCTCAAGATCCCCATCAGCTA 59.031 50.000 0.00 0.00 0.00 3.32
116 117 5.247110 TCAAGATCCCCATCAGCTATAAGAC 59.753 44.000 0.00 0.00 0.00 3.01
124 125 4.141846 CCATCAGCTATAAGACTGTGTGGT 60.142 45.833 0.00 0.00 36.70 4.16
201 202 0.403271 AGAACATGGTCAAGGCAGCT 59.597 50.000 14.46 0.00 0.00 4.24
208 209 2.666190 TCAAGGCAGCTGTCGTGC 60.666 61.111 26.64 7.88 40.42 5.34
283 284 1.587933 CGCCCTACCTCTCTATCCGC 61.588 65.000 0.00 0.00 0.00 5.54
285 286 0.112606 CCCTACCTCTCTATCCGCCA 59.887 60.000 0.00 0.00 0.00 5.69
299 300 2.983030 GCCATCGGGTTGTGCACA 60.983 61.111 17.42 17.42 36.17 4.57
305 306 0.749818 TCGGGTTGTGCACATGTGTT 60.750 50.000 26.01 0.00 0.00 3.32
351 352 5.519722 AGTGATTCATGAAACCGAACAAAC 58.480 37.500 13.09 2.37 0.00 2.93
353 354 5.746245 GTGATTCATGAAACCGAACAAACAA 59.254 36.000 13.09 0.00 0.00 2.83
363 364 8.129211 TGAAACCGAACAAACAACAAAATTTTT 58.871 25.926 0.00 0.00 0.00 1.94
386 451 1.893137 TGACTAGTGCGTTGGAGATGT 59.107 47.619 0.00 0.00 0.00 3.06
404 469 7.978975 TGGAGATGTCCTAAGTTTTTGTTTTTG 59.021 33.333 10.72 0.00 44.30 2.44
407 472 8.704668 AGATGTCCTAAGTTTTTGTTTTTGGAT 58.295 29.630 0.00 0.00 30.59 3.41
441 506 1.412453 AAGTAGGGCCCACACGTCAA 61.412 55.000 27.56 0.00 0.00 3.18
442 507 1.670083 GTAGGGCCCACACGTCAAC 60.670 63.158 27.56 4.69 0.00 3.18
479 544 2.666994 CCTCGCTTTAGGTCTTCGTTTC 59.333 50.000 0.00 0.00 31.46 2.78
483 548 4.812626 TCGCTTTAGGTCTTCGTTTCTTTT 59.187 37.500 0.00 0.00 0.00 2.27
484 549 5.295045 TCGCTTTAGGTCTTCGTTTCTTTTT 59.705 36.000 0.00 0.00 0.00 1.94
574 641 5.949952 CCCAGCCTAAACCATAGTAAGTTTT 59.050 40.000 6.91 0.00 37.39 2.43
620 687 1.961793 TTCCATAATGTAGTGCGCCC 58.038 50.000 4.18 0.00 0.00 6.13
624 691 3.263170 TCCATAATGTAGTGCGCCCATAT 59.737 43.478 4.18 0.00 0.00 1.78
636 703 3.380004 TGCGCCCATATTTTTCGAGATTT 59.620 39.130 4.18 0.00 0.00 2.17
733 805 4.393062 ACGAATTCAAAGGTAGCTGTCATG 59.607 41.667 6.22 0.00 0.00 3.07
741 813 1.153369 TAGCTGTCATGCTTCCGCC 60.153 57.895 0.00 0.00 43.74 6.13
798 1570 7.637709 AAAATAAATCTTCAAAAGCGTGGAC 57.362 32.000 0.00 0.00 0.00 4.02
884 2210 0.842030 AGGTGGTGATCAGGGCTTCA 60.842 55.000 0.00 0.00 0.00 3.02
951 2277 6.463614 CCCAATCTATCCTCGTCAAATCTTCT 60.464 42.308 0.00 0.00 0.00 2.85
954 2280 7.595819 ATCTATCCTCGTCAAATCTTCTTCT 57.404 36.000 0.00 0.00 0.00 2.85
977 2303 1.721487 GTCGCAATCCAATCCACCG 59.279 57.895 0.00 0.00 0.00 4.94
1339 2668 1.339727 ACTGGGACGAAGGTATTTGCC 60.340 52.381 0.00 0.00 0.00 4.52
1346 2675 1.092348 GAAGGTATTTGCCGTCACCC 58.908 55.000 0.00 0.00 37.07 4.61
1351 2680 1.132262 GTATTTGCCGTCACCCACATG 59.868 52.381 0.00 0.00 0.00 3.21
1354 2683 2.031919 GCCGTCACCCACATGTCA 59.968 61.111 0.00 0.00 0.00 3.58
1361 2690 0.957395 CACCCACATGTCAGCCTGTC 60.957 60.000 0.00 0.00 0.00 3.51
1376 2705 1.338579 CCTGTCAGGGTTCTTCTGAGC 60.339 57.143 11.46 0.00 41.32 4.26
1385 2714 1.542030 GTTCTTCTGAGCTGACCGAGA 59.458 52.381 0.00 0.00 0.00 4.04
1433 2762 5.012328 ACGAATTCCTACTCTGGATTGTC 57.988 43.478 0.00 0.00 35.83 3.18
1444 2773 0.810648 TGGATTGTCTTTGCGATGGC 59.189 50.000 0.00 0.00 40.52 4.40
1463 2792 7.253750 GCGATGGCTGTTTTTGTATAAGAAATG 60.254 37.037 0.00 0.00 35.83 2.32
1467 2796 6.644592 GGCTGTTTTTGTATAAGAAATGTGCA 59.355 34.615 0.00 0.00 0.00 4.57
1469 2798 8.003784 GCTGTTTTTGTATAAGAAATGTGCAAC 58.996 33.333 0.00 0.00 37.35 4.17
1555 2888 1.232119 TTGCTGTGCTCATCTGTGTG 58.768 50.000 0.00 0.00 0.00 3.82
1668 3001 2.094182 GGAGTCTGGTGCTGTTTATCGA 60.094 50.000 0.00 0.00 0.00 3.59
1674 3007 3.081061 TGGTGCTGTTTATCGATGCTTT 58.919 40.909 8.54 0.00 0.00 3.51
1772 3105 7.634718 TGGTTCCAAGTTCCACATATATGTAA 58.365 34.615 17.86 7.44 39.39 2.41
1773 3106 7.554835 TGGTTCCAAGTTCCACATATATGTAAC 59.445 37.037 17.86 17.98 39.39 2.50
1775 3108 9.120538 GTTCCAAGTTCCACATATATGTAACAT 57.879 33.333 23.83 14.89 39.39 2.71
1794 3138 9.407380 TGTAACATATTGTTGGCTCTTATCAAT 57.593 29.630 3.22 0.00 41.30 2.57
1802 3146 5.132648 TGTTGGCTCTTATCAATATGGGAGT 59.867 40.000 0.00 0.00 0.00 3.85
1806 3150 5.936956 GGCTCTTATCAATATGGGAGTTGAG 59.063 44.000 0.00 0.00 37.72 3.02
1905 3250 6.499106 AATGTGACATATCCTACCATGACA 57.501 37.500 0.00 0.00 0.00 3.58
1906 3251 5.535753 TGTGACATATCCTACCATGACAG 57.464 43.478 0.00 0.00 29.70 3.51
1930 3275 9.113838 CAGCTATGTATGAGTCATTTAAAACCT 57.886 33.333 11.68 0.00 0.00 3.50
1971 3317 5.501897 GCGTTATTTCGAGTAAACTCATGGG 60.502 44.000 10.55 0.00 43.00 4.00
1972 3318 5.006358 CGTTATTTCGAGTAAACTCATGGGG 59.994 44.000 10.55 0.00 43.00 4.96
2025 3371 8.749354 TCAAATAGTAGCTCATCTAACAAGTGA 58.251 33.333 0.00 0.00 0.00 3.41
2168 3514 2.207590 GGCACACCTTATACTTACCGC 58.792 52.381 0.00 0.00 0.00 5.68
2186 3532 0.678048 GCTTCCGAGTGCCAAAGGAT 60.678 55.000 0.00 0.00 32.19 3.24
2257 3603 6.655078 AAGTGTTTGAGCCTATGTTTTCAT 57.345 33.333 0.00 0.00 43.60 2.57
2258 3604 6.655078 AGTGTTTGAGCCTATGTTTTCATT 57.345 33.333 0.00 0.00 41.25 2.57
2259 3605 7.054491 AGTGTTTGAGCCTATGTTTTCATTT 57.946 32.000 0.00 0.00 41.25 2.32
2260 3606 7.500141 AGTGTTTGAGCCTATGTTTTCATTTT 58.500 30.769 0.00 0.00 41.25 1.82
2261 3607 7.653311 AGTGTTTGAGCCTATGTTTTCATTTTC 59.347 33.333 0.00 0.00 41.25 2.29
2262 3608 7.437862 GTGTTTGAGCCTATGTTTTCATTTTCA 59.562 33.333 0.00 0.00 41.25 2.69
2269 3615 8.806146 AGCCTATGTTTTCATTTTCACATTACT 58.194 29.630 0.00 0.00 41.25 2.24
2270 3616 8.863049 GCCTATGTTTTCATTTTCACATTACTG 58.137 33.333 0.00 0.00 41.25 2.74
2281 3627 5.554437 TTCACATTACTGTAGGTCCACAA 57.446 39.130 0.00 0.00 33.14 3.33
2313 3659 5.805486 TGCTCTTATGCTTTCTACGTTAGTG 59.195 40.000 0.00 0.00 0.00 2.74
2325 3671 9.543018 CTTTCTACGTTAGTGATCCAAAATTTC 57.457 33.333 0.00 0.00 0.00 2.17
2336 3682 5.634439 TGATCCAAAATTTCTGAATTGTGCG 59.366 36.000 0.00 0.00 38.58 5.34
2435 3781 4.668576 TTTCGTGATCATGAGAAGCAAC 57.331 40.909 16.86 0.00 0.00 4.17
2489 3835 1.538512 GATGATGCTACCATGCGCATT 59.461 47.619 22.81 10.36 46.06 3.56
2543 3890 4.158764 ACTCTTGGTCCTTACTTCTGATCG 59.841 45.833 0.00 0.00 0.00 3.69
2572 3949 4.624024 CGCAGAATTCATGCATTTTCTTGT 59.376 37.500 21.68 0.00 44.05 3.16
2661 4038 3.568538 CTGCACCTGCTTTTATTGTGTC 58.431 45.455 0.00 0.00 42.66 3.67
2662 4039 2.031245 TGCACCTGCTTTTATTGTGTCG 60.031 45.455 0.00 0.00 42.66 4.35
2663 4040 2.031157 GCACCTGCTTTTATTGTGTCGT 60.031 45.455 0.00 0.00 38.21 4.34
2665 4042 3.249799 CACCTGCTTTTATTGTGTCGTGA 59.750 43.478 0.00 0.00 0.00 4.35
2666 4043 4.072131 ACCTGCTTTTATTGTGTCGTGAT 58.928 39.130 0.00 0.00 0.00 3.06
2667 4044 4.518970 ACCTGCTTTTATTGTGTCGTGATT 59.481 37.500 0.00 0.00 0.00 2.57
2668 4045 5.703592 ACCTGCTTTTATTGTGTCGTGATTA 59.296 36.000 0.00 0.00 0.00 1.75
2669 4046 6.374333 ACCTGCTTTTATTGTGTCGTGATTAT 59.626 34.615 0.00 0.00 0.00 1.28
2670 4047 7.551262 ACCTGCTTTTATTGTGTCGTGATTATA 59.449 33.333 0.00 0.00 0.00 0.98
2671 4048 8.394877 CCTGCTTTTATTGTGTCGTGATTATAA 58.605 33.333 0.00 0.00 0.00 0.98
2706 4083 6.650120 ACCTTCGGAATGTGTGATTATAGTT 58.350 36.000 0.00 0.00 0.00 2.24
2938 4315 9.154847 TGACTGTCAAACTGTATTCTTGATATG 57.845 33.333 8.27 0.00 32.08 1.78
3166 4544 7.713734 AAATGAGTTCTTCACCATTGATGAT 57.286 32.000 0.00 0.00 38.99 2.45
3181 4559 8.522830 ACCATTGATGATTTAGGTTAGTTTGTG 58.477 33.333 0.00 0.00 0.00 3.33
3192 4570 9.895138 TTTAGGTTAGTTTGTGAACTCTTACTT 57.105 29.630 0.00 0.00 44.75 2.24
3249 4627 5.531634 TGTTTCATCAATTCTCACTTTGGC 58.468 37.500 0.00 0.00 0.00 4.52
3333 4711 6.470877 TCTTTGACGCAACAAAATTGAAGTAC 59.529 34.615 0.00 0.00 38.90 2.73
3335 4713 5.826586 TGACGCAACAAAATTGAAGTACAT 58.173 33.333 0.00 0.00 0.00 2.29
3398 4776 2.622942 TCACTTGAACATGGGAAGTTGC 59.377 45.455 0.00 0.00 0.00 4.17
3403 4781 3.760738 TGAACATGGGAAGTTGCATACA 58.239 40.909 0.00 0.00 0.00 2.29
3551 4929 5.545588 CATTCTTCTGGAGTCTGAAAGTGA 58.454 41.667 0.00 0.00 33.76 3.41
3593 4979 7.285401 ACTGGAATTCAATTTTCTGTACACACT 59.715 33.333 7.93 0.00 0.00 3.55
3617 5003 5.877491 AGGGGTTCTTTACTTTGGAACTAG 58.123 41.667 0.00 0.00 39.20 2.57
3618 5004 5.371769 AGGGGTTCTTTACTTTGGAACTAGT 59.628 40.000 0.00 0.00 39.20 2.57
3619 5005 6.559921 AGGGGTTCTTTACTTTGGAACTAGTA 59.440 38.462 0.00 0.00 39.20 1.82
3663 5049 7.040755 TGGACTTATTTGACACAGTATTTGGTG 60.041 37.037 0.00 0.00 40.78 4.17
4039 5461 6.067217 AGGCTTGTTCCTATCAATTACTGT 57.933 37.500 0.00 0.00 33.95 3.55
4117 5540 2.614057 CAAACTTTCTGAGGTTGCGTCT 59.386 45.455 0.00 0.00 45.43 4.18
4127 5550 1.072331 AGGTTGCGTCTGGTCTCATTT 59.928 47.619 0.00 0.00 0.00 2.32
4232 5655 4.654262 AGACTCACAAAAGGAAGGTCAGTA 59.346 41.667 0.00 0.00 0.00 2.74
4235 5658 5.765182 ACTCACAAAAGGAAGGTCAGTATTG 59.235 40.000 0.00 0.00 0.00 1.90
4236 5659 5.935945 TCACAAAAGGAAGGTCAGTATTGA 58.064 37.500 0.00 0.00 0.00 2.57
4251 5674 2.425143 ATTGATGAGGGCGATTGTGT 57.575 45.000 0.00 0.00 0.00 3.72
4276 5699 3.068732 TGATTTTGTTGCCAACGGAATCA 59.931 39.130 23.29 23.29 40.15 2.57
4301 5724 1.398692 TGTTCCTGGGCTGTTTCAAC 58.601 50.000 0.00 0.00 0.00 3.18
4302 5725 1.064017 TGTTCCTGGGCTGTTTCAACT 60.064 47.619 0.00 0.00 0.00 3.16
4380 5804 8.087982 AGACATACATGCAAGATTTATTACCG 57.912 34.615 0.00 0.00 0.00 4.02
4382 5806 7.639039 ACATACATGCAAGATTTATTACCGTG 58.361 34.615 0.00 0.00 0.00 4.94
4387 5811 7.540745 ACATGCAAGATTTATTACCGTGTTTTC 59.459 33.333 0.00 0.00 0.00 2.29
4422 5858 8.463930 CTTCTGGAAGTAATCTATCTCTCACT 57.536 38.462 2.47 0.00 33.87 3.41
4423 5859 7.815840 TCTGGAAGTAATCTATCTCTCACTG 57.184 40.000 0.00 0.00 33.76 3.66
4516 5957 4.965814 TGGCTGATATCAAGTTCCTCATC 58.034 43.478 6.90 0.00 0.00 2.92
4604 6045 7.609760 TTGTATTGCTGTATTAACCTGTGAG 57.390 36.000 0.00 0.00 0.00 3.51
4634 6075 1.148310 CGCTATTTATGCCACTCCGG 58.852 55.000 0.00 0.00 38.11 5.14
4796 6237 0.683973 ACTGGGAGTCACTGCAGAAG 59.316 55.000 23.35 12.71 0.00 2.85
4823 6264 2.106683 GTCCCCGGTTGAATCTGCG 61.107 63.158 0.00 0.00 0.00 5.18
4859 6301 7.576098 GCTTCGTAAATTTTGTAGGGAATCCAA 60.576 37.037 0.09 0.00 34.83 3.53
4881 6325 8.243426 TCCAAAACAAATATAATGTGAGTGAGC 58.757 33.333 0.00 0.00 0.00 4.26
4887 6331 3.827008 ATAATGTGAGTGAGCGATGGT 57.173 42.857 0.00 0.00 0.00 3.55
4890 6334 2.254546 TGTGAGTGAGCGATGGTTTT 57.745 45.000 0.00 0.00 0.00 2.43
5131 6581 3.674997 AGATGTTTTCTACGCCATGTGT 58.325 40.909 0.00 0.00 30.96 3.72
5152 6602 8.894768 TGTGTTTTTATTCCTAAAACCAATGG 57.105 30.769 0.00 0.00 42.16 3.16
5153 6603 7.934120 TGTGTTTTTATTCCTAAAACCAATGGG 59.066 33.333 3.55 0.00 42.16 4.00
5154 6604 8.151596 GTGTTTTTATTCCTAAAACCAATGGGA 58.848 33.333 3.55 0.00 42.16 4.37
5155 6605 8.714906 TGTTTTTATTCCTAAAACCAATGGGAA 58.285 29.630 3.55 0.00 42.16 3.97
5156 6606 9.562408 GTTTTTATTCCTAAAACCAATGGGAAA 57.438 29.630 3.55 0.00 38.78 3.13
5159 6609 9.952030 TTTATTCCTAAAACCAATGGGAAAATC 57.048 29.630 3.55 0.00 39.14 2.17
5160 6610 6.367374 TTCCTAAAACCAATGGGAAAATCC 57.633 37.500 3.55 0.00 38.05 3.01
5161 6611 5.407049 TCCTAAAACCAATGGGAAAATCCA 58.593 37.500 3.55 0.00 38.64 3.41
5163 6613 6.156083 TCCTAAAACCAATGGGAAAATCCATC 59.844 38.462 3.55 0.00 46.05 3.51
5164 6614 6.156775 CCTAAAACCAATGGGAAAATCCATCT 59.843 38.462 3.55 0.00 46.05 2.90
5165 6615 5.682234 AAACCAATGGGAAAATCCATCTC 57.318 39.130 3.55 0.00 46.05 2.75
5166 6616 4.614967 ACCAATGGGAAAATCCATCTCT 57.385 40.909 3.55 0.00 46.05 3.10
5167 6617 4.284178 ACCAATGGGAAAATCCATCTCTG 58.716 43.478 3.55 0.00 46.05 3.35
5168 6618 3.069158 CCAATGGGAAAATCCATCTCTGC 59.931 47.826 0.00 0.00 46.05 4.26
5169 6619 3.675348 ATGGGAAAATCCATCTCTGCA 57.325 42.857 0.00 0.00 43.57 4.41
5170 6620 2.726821 TGGGAAAATCCATCTCTGCAC 58.273 47.619 0.00 0.00 38.64 4.57
5171 6621 2.027385 GGGAAAATCCATCTCTGCACC 58.973 52.381 0.00 0.00 38.64 5.01
5172 6622 2.357569 GGGAAAATCCATCTCTGCACCT 60.358 50.000 0.00 0.00 38.64 4.00
5173 6623 3.117888 GGGAAAATCCATCTCTGCACCTA 60.118 47.826 0.00 0.00 38.64 3.08
5174 6624 4.133078 GGAAAATCCATCTCTGCACCTAG 58.867 47.826 0.00 0.00 36.28 3.02
5175 6625 2.926778 AATCCATCTCTGCACCTAGC 57.073 50.000 0.00 0.00 45.96 3.42
5176 6626 2.100128 ATCCATCTCTGCACCTAGCT 57.900 50.000 0.00 0.00 45.94 3.32
5177 6627 1.407936 TCCATCTCTGCACCTAGCTC 58.592 55.000 0.00 0.00 45.94 4.09
5178 6628 1.117994 CCATCTCTGCACCTAGCTCA 58.882 55.000 0.00 0.00 45.94 4.26
5179 6629 1.693062 CCATCTCTGCACCTAGCTCAT 59.307 52.381 0.00 0.00 45.94 2.90
5180 6630 2.288948 CCATCTCTGCACCTAGCTCATC 60.289 54.545 0.00 0.00 45.94 2.92
5181 6631 2.450867 TCTCTGCACCTAGCTCATCT 57.549 50.000 0.00 0.00 45.94 2.90
5182 6632 2.030371 TCTCTGCACCTAGCTCATCTG 58.970 52.381 0.00 0.00 45.94 2.90
5183 6633 0.463204 TCTGCACCTAGCTCATCTGC 59.537 55.000 0.00 0.00 45.94 4.26
5184 6634 0.177373 CTGCACCTAGCTCATCTGCA 59.823 55.000 0.00 0.00 45.94 4.41
5185 6635 0.107993 TGCACCTAGCTCATCTGCAC 60.108 55.000 0.00 0.00 45.94 4.57
5186 6636 0.813210 GCACCTAGCTCATCTGCACC 60.813 60.000 0.00 0.00 41.15 5.01
5187 6637 0.179062 CACCTAGCTCATCTGCACCC 60.179 60.000 0.00 0.00 34.99 4.61
5188 6638 1.341156 ACCTAGCTCATCTGCACCCC 61.341 60.000 0.00 0.00 34.99 4.95
5189 6639 1.449353 CTAGCTCATCTGCACCCCC 59.551 63.158 0.00 0.00 34.99 5.40
5190 6640 1.306911 TAGCTCATCTGCACCCCCA 60.307 57.895 0.00 0.00 34.99 4.96
5191 6641 0.695462 TAGCTCATCTGCACCCCCAT 60.695 55.000 0.00 0.00 34.99 4.00
5192 6642 1.076485 GCTCATCTGCACCCCCATT 60.076 57.895 0.00 0.00 0.00 3.16
5193 6643 1.389609 GCTCATCTGCACCCCCATTG 61.390 60.000 0.00 0.00 0.00 2.82
5194 6644 0.256752 CTCATCTGCACCCCCATTGA 59.743 55.000 0.00 0.00 0.00 2.57
5195 6645 0.034186 TCATCTGCACCCCCATTGAC 60.034 55.000 0.00 0.00 0.00 3.18
5196 6646 1.077501 ATCTGCACCCCCATTGACG 60.078 57.895 0.00 0.00 0.00 4.35
5197 6647 1.561769 ATCTGCACCCCCATTGACGA 61.562 55.000 0.00 0.00 0.00 4.20
5198 6648 1.303236 CTGCACCCCCATTGACGAA 60.303 57.895 0.00 0.00 0.00 3.85
5199 6649 1.303236 TGCACCCCCATTGACGAAG 60.303 57.895 0.00 0.00 0.00 3.79
5200 6650 1.002624 GCACCCCCATTGACGAAGA 60.003 57.895 0.00 0.00 0.00 2.87
5201 6651 0.608035 GCACCCCCATTGACGAAGAA 60.608 55.000 0.00 0.00 0.00 2.52
5202 6652 1.904287 CACCCCCATTGACGAAGAAA 58.096 50.000 0.00 0.00 0.00 2.52
5203 6653 2.235016 CACCCCCATTGACGAAGAAAA 58.765 47.619 0.00 0.00 0.00 2.29
5204 6654 2.825532 CACCCCCATTGACGAAGAAAAT 59.174 45.455 0.00 0.00 0.00 1.82
5205 6655 3.089284 ACCCCCATTGACGAAGAAAATC 58.911 45.455 0.00 0.00 0.00 2.17
5206 6656 3.088532 CCCCCATTGACGAAGAAAATCA 58.911 45.455 0.00 0.00 0.00 2.57
5207 6657 3.509575 CCCCCATTGACGAAGAAAATCAA 59.490 43.478 0.00 0.00 36.81 2.57
5208 6658 4.021544 CCCCCATTGACGAAGAAAATCAAA 60.022 41.667 0.00 0.00 36.03 2.69
5209 6659 5.510520 CCCCCATTGACGAAGAAAATCAAAA 60.511 40.000 0.00 0.00 36.03 2.44
5210 6660 5.405269 CCCCATTGACGAAGAAAATCAAAAC 59.595 40.000 0.00 0.00 36.03 2.43
5211 6661 5.982516 CCCATTGACGAAGAAAATCAAAACA 59.017 36.000 0.00 0.00 36.03 2.83
5212 6662 6.478344 CCCATTGACGAAGAAAATCAAAACAA 59.522 34.615 0.00 0.00 36.03 2.83
5213 6663 7.010923 CCCATTGACGAAGAAAATCAAAACAAA 59.989 33.333 0.00 0.00 36.03 2.83
5214 6664 8.550376 CCATTGACGAAGAAAATCAAAACAAAT 58.450 29.630 0.00 0.00 36.03 2.32
5217 6667 9.796120 TTGACGAAGAAAATCAAAACAAATACT 57.204 25.926 0.00 0.00 29.56 2.12
5264 6714 7.778470 AAAAATTGTGCGGTAGAAAATTTGA 57.222 28.000 0.00 0.00 32.36 2.69
5265 6715 7.961325 AAAATTGTGCGGTAGAAAATTTGAT 57.039 28.000 0.00 0.00 32.36 2.57
5266 6716 6.949578 AATTGTGCGGTAGAAAATTTGATG 57.050 33.333 0.00 0.00 0.00 3.07
5267 6717 3.832276 TGTGCGGTAGAAAATTTGATGC 58.168 40.909 0.00 0.00 0.00 3.91
5268 6718 2.845967 GTGCGGTAGAAAATTTGATGCG 59.154 45.455 0.00 0.00 0.00 4.73
5269 6719 2.486203 TGCGGTAGAAAATTTGATGCGT 59.514 40.909 0.00 0.00 0.00 5.24
5270 6720 2.845967 GCGGTAGAAAATTTGATGCGTG 59.154 45.455 0.00 0.00 0.00 5.34
5271 6721 3.425625 GCGGTAGAAAATTTGATGCGTGA 60.426 43.478 0.00 0.00 0.00 4.35
5272 6722 4.334443 CGGTAGAAAATTTGATGCGTGAG 58.666 43.478 0.00 0.00 0.00 3.51
5273 6723 4.662145 GGTAGAAAATTTGATGCGTGAGG 58.338 43.478 0.00 0.00 0.00 3.86
5274 6724 4.156008 GGTAGAAAATTTGATGCGTGAGGT 59.844 41.667 0.00 0.00 0.00 3.85
5275 6725 4.853924 AGAAAATTTGATGCGTGAGGTT 57.146 36.364 0.00 0.00 0.00 3.50
5276 6726 4.798574 AGAAAATTTGATGCGTGAGGTTC 58.201 39.130 0.00 0.00 0.00 3.62
5277 6727 2.900122 AATTTGATGCGTGAGGTTCG 57.100 45.000 0.00 0.00 0.00 3.95
5286 6736 2.969443 CGTGAGGTTCGCTCAAATTT 57.031 45.000 0.00 0.00 32.15 1.82
5287 6737 3.268013 CGTGAGGTTCGCTCAAATTTT 57.732 42.857 0.00 0.00 32.15 1.82
5288 6738 3.226347 CGTGAGGTTCGCTCAAATTTTC 58.774 45.455 0.00 0.00 32.15 2.29
5289 6739 3.303725 CGTGAGGTTCGCTCAAATTTTCA 60.304 43.478 0.00 0.00 32.15 2.69
5290 6740 4.606961 GTGAGGTTCGCTCAAATTTTCAA 58.393 39.130 0.00 0.00 32.15 2.69
5291 6741 5.040635 GTGAGGTTCGCTCAAATTTTCAAA 58.959 37.500 0.00 0.00 32.15 2.69
5292 6742 5.691754 GTGAGGTTCGCTCAAATTTTCAAAT 59.308 36.000 0.00 0.00 32.15 2.32
5293 6743 5.920273 TGAGGTTCGCTCAAATTTTCAAATC 59.080 36.000 0.00 0.00 0.00 2.17
5294 6744 5.841810 AGGTTCGCTCAAATTTTCAAATCA 58.158 33.333 0.00 0.00 0.00 2.57
5295 6745 6.458210 AGGTTCGCTCAAATTTTCAAATCAT 58.542 32.000 0.00 0.00 0.00 2.45
5296 6746 6.930722 AGGTTCGCTCAAATTTTCAAATCATT 59.069 30.769 0.00 0.00 0.00 2.57
5297 6747 7.442062 AGGTTCGCTCAAATTTTCAAATCATTT 59.558 29.630 0.00 0.00 0.00 2.32
5298 6748 7.531534 GGTTCGCTCAAATTTTCAAATCATTTG 59.468 33.333 3.46 3.46 41.96 2.32
5299 6749 7.119605 TCGCTCAAATTTTCAAATCATTTGG 57.880 32.000 10.30 0.00 40.98 3.28
5300 6750 6.927936 TCGCTCAAATTTTCAAATCATTTGGA 59.072 30.769 10.30 0.00 40.98 3.53
5301 6751 7.011189 CGCTCAAATTTTCAAATCATTTGGAC 58.989 34.615 10.30 1.32 40.98 4.02
5302 6752 7.307278 CGCTCAAATTTTCAAATCATTTGGACA 60.307 33.333 10.30 0.00 40.98 4.02
5303 6753 8.508875 GCTCAAATTTTCAAATCATTTGGACAT 58.491 29.630 10.30 0.00 40.98 3.06
5304 6754 9.820229 CTCAAATTTTCAAATCATTTGGACATG 57.180 29.630 10.30 0.00 40.98 3.21
5305 6755 9.339850 TCAAATTTTCAAATCATTTGGACATGT 57.660 25.926 10.30 0.00 40.98 3.21
5306 6756 9.388346 CAAATTTTCAAATCATTTGGACATGTG 57.612 29.630 10.30 2.02 40.98 3.21
5307 6757 8.905660 AATTTTCAAATCATTTGGACATGTGA 57.094 26.923 10.30 0.00 40.98 3.58
5308 6758 7.712264 TTTTCAAATCATTTGGACATGTGAC 57.288 32.000 10.30 0.00 40.98 3.67
5309 6759 6.402456 TTCAAATCATTTGGACATGTGACA 57.598 33.333 10.30 0.00 40.98 3.58
5310 6760 6.402456 TCAAATCATTTGGACATGTGACAA 57.598 33.333 10.30 5.71 40.98 3.18
5311 6761 6.448852 TCAAATCATTTGGACATGTGACAAG 58.551 36.000 10.30 0.00 40.98 3.16
5312 6762 3.921119 TCATTTGGACATGTGACAAGC 57.079 42.857 1.15 0.00 0.00 4.01
5313 6763 3.489355 TCATTTGGACATGTGACAAGCT 58.511 40.909 1.15 0.00 0.00 3.74
5314 6764 3.503363 TCATTTGGACATGTGACAAGCTC 59.497 43.478 1.15 0.00 0.00 4.09
5315 6765 2.936919 TTGGACATGTGACAAGCTCT 57.063 45.000 1.15 0.00 0.00 4.09
5316 6766 2.462456 TGGACATGTGACAAGCTCTC 57.538 50.000 1.15 0.00 0.00 3.20
5317 6767 1.693606 TGGACATGTGACAAGCTCTCA 59.306 47.619 1.15 0.00 0.00 3.27
5318 6768 2.289257 TGGACATGTGACAAGCTCTCAG 60.289 50.000 1.15 0.00 0.00 3.35
5319 6769 1.731160 GACATGTGACAAGCTCTCAGC 59.269 52.381 1.15 0.00 42.84 4.26
5320 6770 1.071228 ACATGTGACAAGCTCTCAGCA 59.929 47.619 0.00 0.00 45.56 4.41
5321 6771 2.148768 CATGTGACAAGCTCTCAGCAA 58.851 47.619 0.00 0.00 45.56 3.91
5322 6772 2.330440 TGTGACAAGCTCTCAGCAAA 57.670 45.000 0.00 0.00 45.56 3.68
5323 6773 2.642427 TGTGACAAGCTCTCAGCAAAA 58.358 42.857 0.00 0.00 45.56 2.44
5324 6774 3.016031 TGTGACAAGCTCTCAGCAAAAA 58.984 40.909 0.00 0.00 45.56 1.94
5358 6808 9.810870 TTAGGGGTATGTAAAAATGTTTACTGT 57.189 29.630 17.45 10.01 46.29 3.55
5359 6809 8.715190 AGGGGTATGTAAAAATGTTTACTGTT 57.285 30.769 17.45 7.09 46.29 3.16
5360 6810 9.150028 AGGGGTATGTAAAAATGTTTACTGTTT 57.850 29.630 17.45 5.10 46.29 2.83
5361 6811 9.767228 GGGGTATGTAAAAATGTTTACTGTTTT 57.233 29.630 17.45 0.00 46.29 2.43
5365 6815 7.541122 TGTAAAAATGTTTACTGTTTTGGCC 57.459 32.000 17.45 0.00 46.29 5.36
5366 6816 6.539103 TGTAAAAATGTTTACTGTTTTGGCCC 59.461 34.615 17.45 0.00 46.29 5.80
5367 6817 3.378911 AATGTTTACTGTTTTGGCCCG 57.621 42.857 0.00 0.00 0.00 6.13
5368 6818 2.054232 TGTTTACTGTTTTGGCCCGA 57.946 45.000 0.00 0.00 0.00 5.14
5369 6819 2.588620 TGTTTACTGTTTTGGCCCGAT 58.411 42.857 0.00 0.00 0.00 4.18
5370 6820 2.959707 TGTTTACTGTTTTGGCCCGATT 59.040 40.909 0.00 0.00 0.00 3.34
5371 6821 3.385111 TGTTTACTGTTTTGGCCCGATTT 59.615 39.130 0.00 0.00 0.00 2.17
5372 6822 4.583489 TGTTTACTGTTTTGGCCCGATTTA 59.417 37.500 0.00 0.00 0.00 1.40
5373 6823 5.244178 TGTTTACTGTTTTGGCCCGATTTAT 59.756 36.000 0.00 0.00 0.00 1.40
5374 6824 5.570234 TTACTGTTTTGGCCCGATTTATC 57.430 39.130 0.00 0.00 0.00 1.75
5375 6825 3.697166 ACTGTTTTGGCCCGATTTATCT 58.303 40.909 0.00 0.00 0.00 1.98
5376 6826 4.086457 ACTGTTTTGGCCCGATTTATCTT 58.914 39.130 0.00 0.00 0.00 2.40
5377 6827 4.526650 ACTGTTTTGGCCCGATTTATCTTT 59.473 37.500 0.00 0.00 0.00 2.52
5378 6828 5.011635 ACTGTTTTGGCCCGATTTATCTTTT 59.988 36.000 0.00 0.00 0.00 2.27
5379 6829 5.859495 TGTTTTGGCCCGATTTATCTTTTT 58.141 33.333 0.00 0.00 0.00 1.94
5402 6852 3.665544 GAGAGCTGCTCAGATGTCC 57.334 57.895 29.49 2.47 43.38 4.02
5403 6853 0.822811 GAGAGCTGCTCAGATGTCCA 59.177 55.000 29.49 0.00 43.38 4.02
5404 6854 1.206610 GAGAGCTGCTCAGATGTCCAA 59.793 52.381 29.49 0.00 43.38 3.53
5405 6855 1.627329 AGAGCTGCTCAGATGTCCAAA 59.373 47.619 29.49 0.00 32.06 3.28
5406 6856 2.239150 AGAGCTGCTCAGATGTCCAAAT 59.761 45.455 29.49 3.19 32.06 2.32
5407 6857 2.355132 GAGCTGCTCAGATGTCCAAATG 59.645 50.000 24.02 0.00 0.00 2.32
5408 6858 2.026542 AGCTGCTCAGATGTCCAAATGA 60.027 45.455 0.00 0.00 0.00 2.57
5409 6859 2.097142 GCTGCTCAGATGTCCAAATGAC 59.903 50.000 0.29 0.00 44.72 3.06
5410 6860 3.607741 CTGCTCAGATGTCCAAATGACT 58.392 45.455 0.00 0.00 44.75 3.41
5411 6861 4.008330 CTGCTCAGATGTCCAAATGACTT 58.992 43.478 0.00 0.00 44.75 3.01
5412 6862 3.754850 TGCTCAGATGTCCAAATGACTTG 59.245 43.478 0.00 0.00 44.75 3.16
5413 6863 4.005650 GCTCAGATGTCCAAATGACTTGA 58.994 43.478 0.00 0.00 44.75 3.02
5414 6864 4.456911 GCTCAGATGTCCAAATGACTTGAA 59.543 41.667 0.00 0.00 44.75 2.69
5415 6865 5.048504 GCTCAGATGTCCAAATGACTTGAAA 60.049 40.000 0.00 0.00 44.75 2.69
5416 6866 6.349944 GCTCAGATGTCCAAATGACTTGAAAT 60.350 38.462 0.00 0.00 44.75 2.17
5417 6867 7.528996 TCAGATGTCCAAATGACTTGAAATT 57.471 32.000 0.00 0.00 44.75 1.82
5418 6868 7.954835 TCAGATGTCCAAATGACTTGAAATTT 58.045 30.769 0.00 0.00 44.75 1.82
5419 6869 7.868922 TCAGATGTCCAAATGACTTGAAATTTG 59.131 33.333 0.00 0.00 44.75 2.32
5424 6874 5.505165 CAAATGACTTGAAATTTGGAGCG 57.495 39.130 0.00 0.00 39.19 5.03
5425 6875 5.221880 CAAATGACTTGAAATTTGGAGCGA 58.778 37.500 0.00 0.00 39.19 4.93
5426 6876 4.691860 ATGACTTGAAATTTGGAGCGAG 57.308 40.909 0.00 0.00 0.00 5.03
5427 6877 2.226437 TGACTTGAAATTTGGAGCGAGC 59.774 45.455 0.00 0.00 0.00 5.03
5428 6878 1.541588 ACTTGAAATTTGGAGCGAGCC 59.458 47.619 0.00 0.00 0.00 4.70
5429 6879 1.815003 CTTGAAATTTGGAGCGAGCCT 59.185 47.619 0.00 0.00 0.00 4.58
5430 6880 1.453155 TGAAATTTGGAGCGAGCCTC 58.547 50.000 0.00 0.00 39.98 4.70
5431 6881 1.271325 TGAAATTTGGAGCGAGCCTCA 60.271 47.619 0.00 0.00 42.62 3.86
5432 6882 1.131315 GAAATTTGGAGCGAGCCTCAC 59.869 52.381 0.00 0.00 42.62 3.51
5433 6883 1.021390 AATTTGGAGCGAGCCTCACG 61.021 55.000 0.00 0.00 42.62 4.35
5440 6890 3.874873 CGAGCCTCACGCATCAAA 58.125 55.556 0.00 0.00 41.38 2.69
5441 6891 2.387309 CGAGCCTCACGCATCAAAT 58.613 52.632 0.00 0.00 41.38 2.32
5442 6892 0.729116 CGAGCCTCACGCATCAAATT 59.271 50.000 0.00 0.00 41.38 1.82
5443 6893 1.530441 CGAGCCTCACGCATCAAATTG 60.530 52.381 0.00 0.00 41.38 2.32
5444 6894 1.470098 GAGCCTCACGCATCAAATTGT 59.530 47.619 0.00 0.00 41.38 2.71
5445 6895 1.470098 AGCCTCACGCATCAAATTGTC 59.530 47.619 0.00 0.00 41.38 3.18
5446 6896 1.470098 GCCTCACGCATCAAATTGTCT 59.530 47.619 0.00 0.00 37.47 3.41
5447 6897 2.677836 GCCTCACGCATCAAATTGTCTA 59.322 45.455 0.00 0.00 37.47 2.59
5448 6898 3.485877 GCCTCACGCATCAAATTGTCTAC 60.486 47.826 0.00 0.00 37.47 2.59
5449 6899 3.063997 CCTCACGCATCAAATTGTCTACC 59.936 47.826 0.00 0.00 0.00 3.18
5450 6900 2.670905 TCACGCATCAAATTGTCTACCG 59.329 45.455 0.00 0.00 0.00 4.02
5451 6901 1.396996 ACGCATCAAATTGTCTACCGC 59.603 47.619 0.00 0.00 0.00 5.68
5452 6902 1.396648 CGCATCAAATTGTCTACCGCA 59.603 47.619 0.00 0.00 0.00 5.69
5453 6903 2.785679 GCATCAAATTGTCTACCGCAC 58.214 47.619 0.00 0.00 0.00 5.34
5454 6904 2.161410 GCATCAAATTGTCTACCGCACA 59.839 45.455 0.00 0.00 0.00 4.57
5455 6905 3.365868 GCATCAAATTGTCTACCGCACAA 60.366 43.478 0.00 0.00 38.12 3.33
5456 6906 4.793071 CATCAAATTGTCTACCGCACAAA 58.207 39.130 0.00 0.00 37.30 2.83
5457 6907 5.401550 CATCAAATTGTCTACCGCACAAAT 58.598 37.500 0.00 0.00 37.30 2.32
5458 6908 5.446143 TCAAATTGTCTACCGCACAAATT 57.554 34.783 0.00 0.00 37.30 1.82
5459 6909 5.837437 TCAAATTGTCTACCGCACAAATTT 58.163 33.333 0.00 0.00 37.30 1.82
5460 6910 6.276847 TCAAATTGTCTACCGCACAAATTTT 58.723 32.000 0.00 0.00 37.30 1.82
5461 6911 6.199908 TCAAATTGTCTACCGCACAAATTTTG 59.800 34.615 7.59 7.59 37.30 2.44
5462 6912 4.640789 TTGTCTACCGCACAAATTTTGT 57.359 36.364 8.97 8.97 46.75 2.83
5463 6913 4.640789 TGTCTACCGCACAAATTTTGTT 57.359 36.364 12.02 1.13 43.23 2.83
5464 6914 5.000012 TGTCTACCGCACAAATTTTGTTT 58.000 34.783 12.02 0.82 43.23 2.83
5465 6915 5.411781 TGTCTACCGCACAAATTTTGTTTT 58.588 33.333 12.02 0.50 43.23 2.43
5466 6916 5.289675 TGTCTACCGCACAAATTTTGTTTTG 59.710 36.000 12.02 6.17 43.23 2.44
5467 6917 4.806247 TCTACCGCACAAATTTTGTTTTGG 59.194 37.500 12.02 14.91 43.23 3.28
5468 6918 3.600388 ACCGCACAAATTTTGTTTTGGA 58.400 36.364 21.84 0.00 43.23 3.53
5469 6919 4.195416 ACCGCACAAATTTTGTTTTGGAT 58.805 34.783 21.84 10.08 43.23 3.41
5470 6920 4.637977 ACCGCACAAATTTTGTTTTGGATT 59.362 33.333 21.84 6.43 43.23 3.01
5471 6921 5.124617 ACCGCACAAATTTTGTTTTGGATTT 59.875 32.000 21.84 5.93 43.23 2.17
5472 6922 6.032717 CCGCACAAATTTTGTTTTGGATTTT 58.967 32.000 12.02 0.00 43.23 1.82
5473 6923 6.529477 CCGCACAAATTTTGTTTTGGATTTTT 59.471 30.769 12.02 0.00 43.23 1.94
5519 6969 8.661352 ATGATTTGTTTTCTAAAAGGGTGTTG 57.339 30.769 0.00 0.00 0.00 3.33
5520 6970 7.841956 TGATTTGTTTTCTAAAAGGGTGTTGA 58.158 30.769 0.00 0.00 0.00 3.18
5521 6971 8.482128 TGATTTGTTTTCTAAAAGGGTGTTGAT 58.518 29.630 0.00 0.00 0.00 2.57
5522 6972 8.661352 ATTTGTTTTCTAAAAGGGTGTTGATG 57.339 30.769 0.00 0.00 0.00 3.07
5523 6973 7.411486 TTGTTTTCTAAAAGGGTGTTGATGA 57.589 32.000 0.00 0.00 0.00 2.92
5524 6974 7.038154 TGTTTTCTAAAAGGGTGTTGATGAG 57.962 36.000 0.00 0.00 0.00 2.90
5525 6975 5.705609 TTTCTAAAAGGGTGTTGATGAGC 57.294 39.130 0.00 0.00 0.00 4.26
5526 6976 3.686016 TCTAAAAGGGTGTTGATGAGCC 58.314 45.455 0.00 0.00 0.00 4.70
5527 6977 2.683211 AAAAGGGTGTTGATGAGCCT 57.317 45.000 0.00 0.00 43.33 4.58
5528 6978 1.915141 AAAGGGTGTTGATGAGCCTG 58.085 50.000 0.00 0.00 40.53 4.85
5529 6979 0.038744 AAGGGTGTTGATGAGCCTGG 59.961 55.000 0.00 0.00 40.53 4.45
5530 6980 1.379044 GGGTGTTGATGAGCCTGGG 60.379 63.158 0.00 0.00 0.00 4.45
5531 6981 2.048603 GGTGTTGATGAGCCTGGGC 61.049 63.158 3.00 3.00 42.33 5.36
5532 6982 1.303561 GTGTTGATGAGCCTGGGCA 60.304 57.895 14.39 0.00 44.88 5.36
5533 6983 1.303561 TGTTGATGAGCCTGGGCAC 60.304 57.895 14.39 8.23 44.88 5.01
5547 6997 3.432262 GGCACCAAAACACCCTACT 57.568 52.632 0.00 0.00 0.00 2.57
5548 6998 1.244816 GGCACCAAAACACCCTACTC 58.755 55.000 0.00 0.00 0.00 2.59
5549 6999 1.477923 GGCACCAAAACACCCTACTCA 60.478 52.381 0.00 0.00 0.00 3.41
5550 7000 2.303175 GCACCAAAACACCCTACTCAA 58.697 47.619 0.00 0.00 0.00 3.02
5551 7001 2.691011 GCACCAAAACACCCTACTCAAA 59.309 45.455 0.00 0.00 0.00 2.69
5552 7002 3.490249 GCACCAAAACACCCTACTCAAAC 60.490 47.826 0.00 0.00 0.00 2.93
5553 7003 3.067601 CACCAAAACACCCTACTCAAACC 59.932 47.826 0.00 0.00 0.00 3.27
5554 7004 3.292460 CCAAAACACCCTACTCAAACCA 58.708 45.455 0.00 0.00 0.00 3.67
5555 7005 3.702045 CCAAAACACCCTACTCAAACCAA 59.298 43.478 0.00 0.00 0.00 3.67
5556 7006 4.343814 CCAAAACACCCTACTCAAACCAAT 59.656 41.667 0.00 0.00 0.00 3.16
5557 7007 5.288804 CAAAACACCCTACTCAAACCAATG 58.711 41.667 0.00 0.00 0.00 2.82
5558 7008 4.447138 AACACCCTACTCAAACCAATGA 57.553 40.909 0.00 0.00 0.00 2.57
5559 7009 4.657814 ACACCCTACTCAAACCAATGAT 57.342 40.909 0.00 0.00 0.00 2.45
5560 7010 4.998051 ACACCCTACTCAAACCAATGATT 58.002 39.130 0.00 0.00 0.00 2.57
5561 7011 5.010282 ACACCCTACTCAAACCAATGATTC 58.990 41.667 0.00 0.00 0.00 2.52
5562 7012 5.222130 ACACCCTACTCAAACCAATGATTCT 60.222 40.000 0.00 0.00 0.00 2.40
5563 7013 6.012858 ACACCCTACTCAAACCAATGATTCTA 60.013 38.462 0.00 0.00 0.00 2.10
5564 7014 7.056635 CACCCTACTCAAACCAATGATTCTAT 58.943 38.462 0.00 0.00 0.00 1.98
5640 7091 5.407407 AAAAGCCTCTTGAGTTCTCGATA 57.593 39.130 0.00 0.00 0.00 2.92
5651 7102 9.798994 TCTTGAGTTCTCGATATACCTAAAAAC 57.201 33.333 0.00 0.00 0.00 2.43
5682 7134 2.426024 TCGAACTGAAATACTCCCTCCG 59.574 50.000 0.00 0.00 0.00 4.63
5687 7139 4.091549 ACTGAAATACTCCCTCCGTTACA 58.908 43.478 0.00 0.00 0.00 2.41
5694 7146 9.117183 GAAATACTCCCTCCGTTACAAATTTAT 57.883 33.333 0.00 0.00 0.00 1.40
5695 7147 9.470399 AAATACTCCCTCCGTTACAAATTTATT 57.530 29.630 0.00 0.00 0.00 1.40
5697 7149 7.854557 ACTCCCTCCGTTACAAATTTATTAC 57.145 36.000 0.00 0.00 0.00 1.89
5725 7177 4.634012 TGAACTAAGGCCACACACTTAT 57.366 40.909 5.01 0.00 0.00 1.73
5735 7187 6.245408 AGGCCACACACTTATTTTAGAATGA 58.755 36.000 5.01 0.00 0.00 2.57
5744 7196 9.668497 ACACTTATTTTAGAATGAAGGGAGTAC 57.332 33.333 0.00 0.00 0.00 2.73
5804 7256 8.500773 AGATGCAACTTTTATTTTTGCTTCATG 58.499 29.630 18.12 0.00 45.74 3.07
5818 7270 9.767684 TTTTTGCTTCATGTATGAATACGTTAG 57.232 29.630 7.67 0.00 44.92 2.34
5820 7272 7.463469 TGCTTCATGTATGAATACGTTAGTG 57.537 36.000 7.67 0.00 44.92 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.552155 GGTGGTTGAGCTACATTCCACA 60.552 50.000 24.08 4.27 45.82 4.17
24 25 1.301401 GCGTGGTGGTTGAGCTACA 60.301 57.895 0.00 0.00 0.00 2.74
25 26 1.004918 AGCGTGGTGGTTGAGCTAC 60.005 57.895 0.00 0.00 36.28 3.58
32 33 2.526873 AGAGGGAGCGTGGTGGTT 60.527 61.111 0.00 0.00 0.00 3.67
49 50 2.518312 CGTGTCGTGCAACAACGGA 61.518 57.895 0.00 0.00 43.73 4.69
55 56 1.911293 ATGATGCCGTGTCGTGCAAC 61.911 55.000 0.00 7.33 36.86 4.17
57 58 2.047370 ATGATGCCGTGTCGTGCA 60.047 55.556 7.46 7.46 37.42 4.57
58 59 2.703409 GATGATGCCGTGTCGTGC 59.297 61.111 0.00 0.00 0.00 5.34
110 111 2.029290 GTCGACCACCACACAGTCTTAT 60.029 50.000 3.51 0.00 0.00 1.73
116 117 1.949133 CGTGTCGACCACCACACAG 60.949 63.158 14.12 0.00 42.67 3.66
124 125 2.725641 CACCAGACGTGTCGACCA 59.274 61.111 14.12 0.00 37.73 4.02
136 137 0.902531 CCCTACCTACACCACACCAG 59.097 60.000 0.00 0.00 0.00 4.00
137 138 1.196104 GCCCTACCTACACCACACCA 61.196 60.000 0.00 0.00 0.00 4.17
142 143 1.537814 CGTGTGCCCTACCTACACCA 61.538 60.000 0.00 0.00 41.12 4.17
147 148 0.394762 ATCGTCGTGTGCCCTACCTA 60.395 55.000 0.00 0.00 0.00 3.08
258 259 0.402504 AGAGAGGTAGGGCGATCGAT 59.597 55.000 21.57 0.00 0.00 3.59
283 284 1.243342 ACATGTGCACAACCCGATGG 61.243 55.000 25.72 8.38 37.80 3.51
285 286 0.537143 ACACATGTGCACAACCCGAT 60.537 50.000 25.72 2.45 0.00 4.18
351 352 6.507771 CGCACTAGTCACCAAAAATTTTGTTG 60.508 38.462 16.15 12.79 0.00 3.33
353 354 5.040635 CGCACTAGTCACCAAAAATTTTGT 58.959 37.500 16.15 0.00 0.00 2.83
363 364 0.317160 CTCCAACGCACTAGTCACCA 59.683 55.000 0.00 0.00 0.00 4.17
386 451 9.825109 CCTTTATCCAAAAACAAAAACTTAGGA 57.175 29.630 0.00 0.00 0.00 2.94
404 469 4.984146 ACTTAGGGCATCTCCTTTATCC 57.016 45.455 0.00 0.00 38.30 2.59
441 506 2.282180 GCATGGTTGGTGTCCGGT 60.282 61.111 0.00 0.00 0.00 5.28
442 507 3.061848 GGCATGGTTGGTGTCCGG 61.062 66.667 0.00 0.00 0.00 5.14
483 548 1.266718 GACATGAAGCACCGCTCAAAA 59.733 47.619 0.00 0.00 38.25 2.44
484 549 0.874390 GACATGAAGCACCGCTCAAA 59.126 50.000 0.00 0.00 38.25 2.69
485 550 0.035317 AGACATGAAGCACCGCTCAA 59.965 50.000 0.00 0.00 38.25 3.02
486 551 0.035317 AAGACATGAAGCACCGCTCA 59.965 50.000 0.00 0.00 38.25 4.26
487 552 0.723981 GAAGACATGAAGCACCGCTC 59.276 55.000 0.00 0.00 38.25 5.03
500 565 1.480789 TGCTATAGCCCACGAAGACA 58.519 50.000 21.84 0.00 41.18 3.41
595 662 4.994852 GCGCACTACATTATGGAATAAGGA 59.005 41.667 0.30 0.00 42.80 3.36
599 666 3.071747 TGGGCGCACTACATTATGGAATA 59.928 43.478 12.74 0.00 0.00 1.75
708 777 3.994392 GACAGCTACCTTTGAATTCGTCA 59.006 43.478 0.04 0.00 0.00 4.35
741 813 1.290203 AATCAACATAGGCGACTGCG 58.710 50.000 0.00 0.00 43.88 5.18
795 1567 3.489059 CCATTCCACAATGTAATGCGTCC 60.489 47.826 3.91 0.00 38.22 4.79
798 1570 3.243168 CCTCCATTCCACAATGTAATGCG 60.243 47.826 3.91 0.00 38.22 4.73
805 1728 2.814805 ACTCCCTCCATTCCACAATG 57.185 50.000 0.00 0.00 39.45 2.82
809 1732 1.763545 GACCTACTCCCTCCATTCCAC 59.236 57.143 0.00 0.00 0.00 4.02
810 1733 1.344087 GGACCTACTCCCTCCATTCCA 60.344 57.143 0.00 0.00 31.83 3.53
923 2249 4.837093 TTGACGAGGATAGATTGGGTTT 57.163 40.909 0.00 0.00 0.00 3.27
930 2256 7.255801 GGAGAAGAAGATTTGACGAGGATAGAT 60.256 40.741 0.00 0.00 0.00 1.98
931 2257 6.039941 GGAGAAGAAGATTTGACGAGGATAGA 59.960 42.308 0.00 0.00 0.00 1.98
951 2277 0.606096 TTGGATTGCGACGAGGAGAA 59.394 50.000 0.00 0.00 0.00 2.87
954 2280 0.179084 GGATTGGATTGCGACGAGGA 60.179 55.000 0.00 0.00 0.00 3.71
989 2315 4.514577 CCGCCATCTCGTCGCCTT 62.515 66.667 0.00 0.00 0.00 4.35
1339 2668 2.034879 GGCTGACATGTGGGTGACG 61.035 63.158 1.15 0.00 0.00 4.35
1346 2675 0.675837 CCCTGACAGGCTGACATGTG 60.676 60.000 23.66 12.12 32.73 3.21
1351 2680 0.398318 AAGAACCCTGACAGGCTGAC 59.602 55.000 23.66 16.47 32.73 3.51
1354 2683 0.689623 CAGAAGAACCCTGACAGGCT 59.310 55.000 16.72 5.10 32.73 4.58
1361 2690 1.338579 GGTCAGCTCAGAAGAACCCTG 60.339 57.143 0.00 0.00 0.00 4.45
1376 2705 5.003160 AGTCATCAGATATCTCTCGGTCAG 58.997 45.833 1.03 0.00 0.00 3.51
1385 2714 9.639563 TTCTTGAACTCTAGTCATCAGATATCT 57.360 33.333 0.00 0.00 0.00 1.98
1433 2762 2.472816 ACAAAAACAGCCATCGCAAAG 58.527 42.857 0.00 0.00 37.52 2.77
1444 2773 8.207252 CGTTGCACATTTCTTATACAAAAACAG 58.793 33.333 0.00 0.00 0.00 3.16
1668 3001 6.599445 AGATACCTCATTAGAGCAAAAGCAT 58.401 36.000 0.00 0.00 40.68 3.79
1674 3007 6.183361 GGGAGAAAGATACCTCATTAGAGCAA 60.183 42.308 0.00 0.00 40.68 3.91
1775 3108 7.754624 TCCCATATTGATAAGAGCCAACAATA 58.245 34.615 0.00 0.00 37.66 1.90
1776 3109 6.613699 TCCCATATTGATAAGAGCCAACAAT 58.386 36.000 0.00 0.00 35.73 2.71
1794 3138 5.783360 TGGAGAACTTTACTCAACTCCCATA 59.217 40.000 0.00 0.00 41.93 2.74
1905 3250 9.113838 CAGGTTTTAAATGACTCATACATAGCT 57.886 33.333 0.00 0.00 0.00 3.32
1906 3251 8.345565 CCAGGTTTTAAATGACTCATACATAGC 58.654 37.037 0.00 0.00 0.00 2.97
1930 3275 0.958091 CGCCCTCAAATTGTTCACCA 59.042 50.000 0.00 0.00 0.00 4.17
2013 3359 8.969260 TGAAGCATCAATATCACTTGTTAGAT 57.031 30.769 0.00 0.00 30.99 1.98
2025 3371 5.069648 TCTCGAGTTCCTGAAGCATCAATAT 59.930 40.000 13.13 0.00 34.49 1.28
2129 3475 3.815401 TGCCTTTCTCTAACTCTTGTTGC 59.185 43.478 0.00 0.00 37.59 4.17
2168 3514 1.089920 CATCCTTTGGCACTCGGAAG 58.910 55.000 3.11 0.00 0.00 3.46
2186 3532 3.314080 GGTCGTTGATTTTCAGTGAACCA 59.686 43.478 4.68 1.48 0.00 3.67
2257 3603 5.931294 TGTGGACCTACAGTAATGTGAAAA 58.069 37.500 5.98 0.00 0.00 2.29
2258 3604 5.554437 TGTGGACCTACAGTAATGTGAAA 57.446 39.130 5.98 0.00 0.00 2.69
2259 3605 5.302360 GTTGTGGACCTACAGTAATGTGAA 58.698 41.667 5.98 0.00 0.00 3.18
2260 3606 4.559906 CGTTGTGGACCTACAGTAATGTGA 60.560 45.833 5.98 0.00 0.00 3.58
2261 3607 3.678072 CGTTGTGGACCTACAGTAATGTG 59.322 47.826 5.98 0.00 0.00 3.21
2262 3608 3.322828 ACGTTGTGGACCTACAGTAATGT 59.677 43.478 0.00 0.00 0.00 2.71
2269 3615 1.758280 AGTTCACGTTGTGGACCTACA 59.242 47.619 4.77 0.00 42.60 2.74
2270 3616 2.132762 CAGTTCACGTTGTGGACCTAC 58.867 52.381 4.77 0.00 42.60 3.18
2281 3627 2.751166 AGCATAAGAGCAGTTCACGT 57.249 45.000 0.00 0.00 36.85 4.49
2313 3659 5.863397 TCGCACAATTCAGAAATTTTGGATC 59.137 36.000 0.00 0.00 34.52 3.36
2336 3682 9.995957 CAGTATATGTATATCACTGTGCTACTC 57.004 37.037 2.12 0.00 33.53 2.59
2435 3781 0.178068 AGTTATACACTGGCTGGCCG 59.822 55.000 7.14 4.75 39.42 6.13
2489 3835 5.925506 TCCGTTACCTGATAACATGAGAA 57.074 39.130 0.00 0.00 43.04 2.87
2543 3890 0.248377 GCATGAATTCTGCGCCAGAC 60.248 55.000 4.18 0.00 40.46 3.51
2689 4066 8.723942 AAGGTCAGAACTATAATCACACATTC 57.276 34.615 0.00 0.00 0.00 2.67
2706 4083 5.163311 TGAGACAGACATTTTGAAGGTCAGA 60.163 40.000 8.00 0.00 44.16 3.27
2938 4315 8.485976 ACAAATACAGACAATTAGAGAGAAGC 57.514 34.615 0.00 0.00 0.00 3.86
3019 4397 2.750166 TGTTTCACTTTCACGCCTTTCA 59.250 40.909 0.00 0.00 0.00 2.69
3020 4398 3.105937 GTGTTTCACTTTCACGCCTTTC 58.894 45.455 0.00 0.00 0.00 2.62
3021 4399 2.752903 AGTGTTTCACTTTCACGCCTTT 59.247 40.909 0.00 0.00 42.59 3.11
3022 4400 2.354821 GAGTGTTTCACTTTCACGCCTT 59.645 45.455 3.91 0.00 45.44 4.35
3166 4544 9.895138 AAGTAAGAGTTCACAAACTAACCTAAA 57.105 29.630 0.00 0.00 45.80 1.85
3181 4559 2.338500 CGCCCAGTGAAGTAAGAGTTC 58.662 52.381 0.00 0.00 0.00 3.01
3192 4570 1.475403 TTTTCAAAACCGCCCAGTGA 58.525 45.000 0.00 0.00 0.00 3.41
3551 4929 9.077885 TGAATTCCAGTCTTACTTTAGCAAAAT 57.922 29.630 2.27 0.00 0.00 1.82
3593 4979 5.917545 AGTTCCAAAGTAAAGAACCCCTA 57.082 39.130 0.00 0.00 40.61 3.53
3617 5003 4.056050 CCACGTATCCCTTTAGCATGTAC 58.944 47.826 0.00 0.00 0.00 2.90
3618 5004 3.962063 TCCACGTATCCCTTTAGCATGTA 59.038 43.478 0.00 0.00 0.00 2.29
3619 5005 2.769663 TCCACGTATCCCTTTAGCATGT 59.230 45.455 0.00 0.00 0.00 3.21
3663 5049 7.011482 TGTGAGAAAGAAACAGAAACTCTTAGC 59.989 37.037 0.00 0.00 0.00 3.09
4044 5466 9.912634 CACTGGAGATTAAAAACACACAAATAT 57.087 29.630 0.00 0.00 0.00 1.28
4046 5468 8.006298 TCACTGGAGATTAAAAACACACAAAT 57.994 30.769 0.00 0.00 0.00 2.32
4047 5469 7.397892 TCACTGGAGATTAAAAACACACAAA 57.602 32.000 0.00 0.00 0.00 2.83
4050 5472 7.202016 TCATCACTGGAGATTAAAAACACAC 57.798 36.000 0.00 0.00 0.00 3.82
4051 5473 7.522073 GCTTCATCACTGGAGATTAAAAACACA 60.522 37.037 0.00 0.00 28.09 3.72
4114 5537 5.423015 TCATAAGCAGAAATGAGACCAGAC 58.577 41.667 0.00 0.00 0.00 3.51
4117 5540 6.988580 CACTATCATAAGCAGAAATGAGACCA 59.011 38.462 0.00 0.00 35.67 4.02
4127 5550 3.963374 AGCTCACCACTATCATAAGCAGA 59.037 43.478 0.00 0.00 0.00 4.26
4171 5594 2.165030 CCACTTCTTCCAACCATCATGC 59.835 50.000 0.00 0.00 0.00 4.06
4232 5655 2.425143 ACACAATCGCCCTCATCAAT 57.575 45.000 0.00 0.00 0.00 2.57
4235 5658 2.487762 TCAAAACACAATCGCCCTCATC 59.512 45.455 0.00 0.00 0.00 2.92
4236 5659 2.513753 TCAAAACACAATCGCCCTCAT 58.486 42.857 0.00 0.00 0.00 2.90
4276 5699 1.153756 CAGCCCAGGAACAACCCTT 59.846 57.895 0.00 0.00 40.05 3.95
4356 5780 7.798516 CACGGTAATAAATCTTGCATGTATGTC 59.201 37.037 0.00 0.00 0.00 3.06
4407 5843 8.718158 ATCATGGTTCAGTGAGAGATAGATTA 57.282 34.615 0.00 0.00 0.00 1.75
4410 5846 7.782168 AGTTATCATGGTTCAGTGAGAGATAGA 59.218 37.037 0.00 0.00 0.00 1.98
4422 5858 8.078060 TCAACATCTCTAGTTATCATGGTTCA 57.922 34.615 0.00 0.00 0.00 3.18
4423 5859 8.948631 TTCAACATCTCTAGTTATCATGGTTC 57.051 34.615 0.00 0.00 0.00 3.62
4516 5957 2.802816 GCATTAGTATTCACGGAGCTGG 59.197 50.000 0.00 0.00 0.00 4.85
4604 6045 3.304057 GCATAAATAGCGACTTTCCCTGC 60.304 47.826 0.00 0.00 0.00 4.85
4634 6075 1.966451 CTTCCCGGTCAACAGCACC 60.966 63.158 0.00 0.00 0.00 5.01
4796 6237 3.553095 AACCGGGGACTCTTGCTGC 62.553 63.158 6.32 0.00 0.00 5.25
4799 6240 0.322546 ATTCAACCGGGGACTCTTGC 60.323 55.000 6.32 0.00 0.00 4.01
4832 6273 6.095021 GGATTCCCTACAAAATTTACGAAGCT 59.905 38.462 0.00 0.00 0.00 3.74
4859 6301 7.609760 TCGCTCACTCACATTATATTTGTTT 57.390 32.000 0.00 0.00 0.00 2.83
5069 6519 3.374220 TTGGCAGTTGAAGCATCAAAG 57.626 42.857 5.85 3.65 46.66 2.77
5070 6520 5.664294 ATATTGGCAGTTGAAGCATCAAA 57.336 34.783 5.85 0.00 46.66 2.69
5152 6602 3.010200 AGGTGCAGAGATGGATTTTCC 57.990 47.619 0.00 0.00 36.96 3.13
5153 6603 3.563390 GCTAGGTGCAGAGATGGATTTTC 59.437 47.826 0.00 0.00 42.31 2.29
5154 6604 3.201708 AGCTAGGTGCAGAGATGGATTTT 59.798 43.478 0.00 0.00 45.94 1.82
5155 6605 2.776536 AGCTAGGTGCAGAGATGGATTT 59.223 45.455 0.00 0.00 45.94 2.17
5156 6606 2.368221 GAGCTAGGTGCAGAGATGGATT 59.632 50.000 0.00 0.00 45.94 3.01
5157 6607 1.969923 GAGCTAGGTGCAGAGATGGAT 59.030 52.381 0.00 0.00 45.94 3.41
5158 6608 1.342374 TGAGCTAGGTGCAGAGATGGA 60.342 52.381 0.00 0.00 45.94 3.41
5159 6609 1.117994 TGAGCTAGGTGCAGAGATGG 58.882 55.000 0.00 0.00 45.94 3.51
5160 6610 2.629137 AGATGAGCTAGGTGCAGAGATG 59.371 50.000 0.00 0.00 45.94 2.90
5161 6611 2.629137 CAGATGAGCTAGGTGCAGAGAT 59.371 50.000 0.00 0.00 45.94 2.75
5162 6612 2.030371 CAGATGAGCTAGGTGCAGAGA 58.970 52.381 0.00 0.00 45.94 3.10
5163 6613 1.538634 GCAGATGAGCTAGGTGCAGAG 60.539 57.143 0.00 0.00 45.94 3.35
5164 6614 0.463204 GCAGATGAGCTAGGTGCAGA 59.537 55.000 0.00 0.00 45.94 4.26
5165 6615 0.177373 TGCAGATGAGCTAGGTGCAG 59.823 55.000 0.00 0.00 45.94 4.41
5166 6616 0.107993 GTGCAGATGAGCTAGGTGCA 60.108 55.000 0.00 8.10 45.94 4.57
5167 6617 0.813210 GGTGCAGATGAGCTAGGTGC 60.813 60.000 0.00 0.00 43.29 5.01
5168 6618 0.179062 GGGTGCAGATGAGCTAGGTG 60.179 60.000 0.00 0.00 34.99 4.00
5169 6619 1.341156 GGGGTGCAGATGAGCTAGGT 61.341 60.000 0.00 0.00 34.99 3.08
5170 6620 1.449353 GGGGTGCAGATGAGCTAGG 59.551 63.158 0.00 0.00 34.99 3.02
5171 6621 1.340399 TGGGGGTGCAGATGAGCTAG 61.340 60.000 0.00 0.00 34.99 3.42
5172 6622 0.695462 ATGGGGGTGCAGATGAGCTA 60.695 55.000 0.00 0.00 34.99 3.32
5173 6623 1.578215 AATGGGGGTGCAGATGAGCT 61.578 55.000 0.00 0.00 34.99 4.09
5174 6624 1.076485 AATGGGGGTGCAGATGAGC 60.076 57.895 0.00 0.00 0.00 4.26
5175 6625 0.256752 TCAATGGGGGTGCAGATGAG 59.743 55.000 0.00 0.00 0.00 2.90
5176 6626 0.034186 GTCAATGGGGGTGCAGATGA 60.034 55.000 0.00 0.00 0.00 2.92
5177 6627 1.378882 CGTCAATGGGGGTGCAGATG 61.379 60.000 0.00 0.00 0.00 2.90
5178 6628 1.077501 CGTCAATGGGGGTGCAGAT 60.078 57.895 0.00 0.00 0.00 2.90
5179 6629 1.773856 TTCGTCAATGGGGGTGCAGA 61.774 55.000 0.00 0.00 0.00 4.26
5180 6630 1.303236 TTCGTCAATGGGGGTGCAG 60.303 57.895 0.00 0.00 0.00 4.41
5181 6631 1.303236 CTTCGTCAATGGGGGTGCA 60.303 57.895 0.00 0.00 0.00 4.57
5182 6632 0.608035 TTCTTCGTCAATGGGGGTGC 60.608 55.000 0.00 0.00 0.00 5.01
5183 6633 1.904287 TTTCTTCGTCAATGGGGGTG 58.096 50.000 0.00 0.00 0.00 4.61
5184 6634 2.668144 TTTTCTTCGTCAATGGGGGT 57.332 45.000 0.00 0.00 0.00 4.95
5185 6635 3.088532 TGATTTTCTTCGTCAATGGGGG 58.911 45.455 0.00 0.00 0.00 5.40
5186 6636 4.782019 TTGATTTTCTTCGTCAATGGGG 57.218 40.909 0.00 0.00 0.00 4.96
5187 6637 5.982516 TGTTTTGATTTTCTTCGTCAATGGG 59.017 36.000 0.00 0.00 32.48 4.00
5188 6638 7.462109 TTGTTTTGATTTTCTTCGTCAATGG 57.538 32.000 0.00 0.00 32.48 3.16
5191 6641 9.796120 AGTATTTGTTTTGATTTTCTTCGTCAA 57.204 25.926 0.00 0.00 0.00 3.18
5240 6690 7.778470 TCAAATTTTCTACCGCACAATTTTT 57.222 28.000 0.00 0.00 0.00 1.94
5241 6691 7.571059 GCATCAAATTTTCTACCGCACAATTTT 60.571 33.333 0.00 0.00 0.00 1.82
5242 6692 6.128580 GCATCAAATTTTCTACCGCACAATTT 60.129 34.615 0.00 0.00 0.00 1.82
5243 6693 5.348451 GCATCAAATTTTCTACCGCACAATT 59.652 36.000 0.00 0.00 0.00 2.32
5244 6694 4.864247 GCATCAAATTTTCTACCGCACAAT 59.136 37.500 0.00 0.00 0.00 2.71
5245 6695 4.233789 GCATCAAATTTTCTACCGCACAA 58.766 39.130 0.00 0.00 0.00 3.33
5246 6696 3.669290 CGCATCAAATTTTCTACCGCACA 60.669 43.478 0.00 0.00 0.00 4.57
5247 6697 2.845967 CGCATCAAATTTTCTACCGCAC 59.154 45.455 0.00 0.00 0.00 5.34
5248 6698 2.486203 ACGCATCAAATTTTCTACCGCA 59.514 40.909 0.00 0.00 0.00 5.69
5249 6699 2.845967 CACGCATCAAATTTTCTACCGC 59.154 45.455 0.00 0.00 0.00 5.68
5250 6700 4.334443 CTCACGCATCAAATTTTCTACCG 58.666 43.478 0.00 0.00 0.00 4.02
5251 6701 4.156008 ACCTCACGCATCAAATTTTCTACC 59.844 41.667 0.00 0.00 0.00 3.18
5252 6702 5.296813 ACCTCACGCATCAAATTTTCTAC 57.703 39.130 0.00 0.00 0.00 2.59
5253 6703 5.390461 CGAACCTCACGCATCAAATTTTCTA 60.390 40.000 0.00 0.00 0.00 2.10
5254 6704 4.613622 CGAACCTCACGCATCAAATTTTCT 60.614 41.667 0.00 0.00 0.00 2.52
5255 6705 3.603770 CGAACCTCACGCATCAAATTTTC 59.396 43.478 0.00 0.00 0.00 2.29
5256 6706 3.564511 CGAACCTCACGCATCAAATTTT 58.435 40.909 0.00 0.00 0.00 1.82
5257 6707 3.201726 CGAACCTCACGCATCAAATTT 57.798 42.857 0.00 0.00 0.00 1.82
5258 6708 2.900122 CGAACCTCACGCATCAAATT 57.100 45.000 0.00 0.00 0.00 1.82
5270 6720 5.920273 TGATTTGAAAATTTGAGCGAACCTC 59.080 36.000 0.00 0.00 41.15 3.85
5271 6721 5.841810 TGATTTGAAAATTTGAGCGAACCT 58.158 33.333 0.00 0.00 0.00 3.50
5272 6722 6.710692 ATGATTTGAAAATTTGAGCGAACC 57.289 33.333 0.00 0.00 0.00 3.62
5273 6723 7.531534 CCAAATGATTTGAAAATTTGAGCGAAC 59.468 33.333 18.82 0.00 41.64 3.95
5274 6724 7.440556 TCCAAATGATTTGAAAATTTGAGCGAA 59.559 29.630 18.82 0.00 41.64 4.70
5275 6725 6.927936 TCCAAATGATTTGAAAATTTGAGCGA 59.072 30.769 18.82 0.89 41.64 4.93
5276 6726 7.011189 GTCCAAATGATTTGAAAATTTGAGCG 58.989 34.615 18.82 0.00 41.64 5.03
5277 6727 7.863666 TGTCCAAATGATTTGAAAATTTGAGC 58.136 30.769 18.82 8.29 41.64 4.26
5278 6728 9.820229 CATGTCCAAATGATTTGAAAATTTGAG 57.180 29.630 18.82 0.00 41.64 3.02
5279 6729 9.339850 ACATGTCCAAATGATTTGAAAATTTGA 57.660 25.926 18.82 3.41 41.64 2.69
5280 6730 9.388346 CACATGTCCAAATGATTTGAAAATTTG 57.612 29.630 18.82 10.49 43.26 2.32
5281 6731 9.339850 TCACATGTCCAAATGATTTGAAAATTT 57.660 25.926 18.82 0.00 43.26 1.82
5282 6732 8.776470 GTCACATGTCCAAATGATTTGAAAATT 58.224 29.630 18.82 0.00 43.26 1.82
5283 6733 7.932491 TGTCACATGTCCAAATGATTTGAAAAT 59.068 29.630 18.82 0.00 43.26 1.82
5284 6734 7.270779 TGTCACATGTCCAAATGATTTGAAAA 58.729 30.769 18.82 0.00 43.26 2.29
5285 6735 6.814043 TGTCACATGTCCAAATGATTTGAAA 58.186 32.000 18.82 4.37 43.26 2.69
5286 6736 6.402456 TGTCACATGTCCAAATGATTTGAA 57.598 33.333 18.82 0.00 43.26 2.69
5287 6737 6.402456 TTGTCACATGTCCAAATGATTTGA 57.598 33.333 18.82 0.00 43.26 2.69
5288 6738 5.119588 GCTTGTCACATGTCCAAATGATTTG 59.880 40.000 10.84 10.84 40.32 2.32
5289 6739 5.011329 AGCTTGTCACATGTCCAAATGATTT 59.989 36.000 0.00 0.00 0.00 2.17
5290 6740 4.525487 AGCTTGTCACATGTCCAAATGATT 59.475 37.500 0.00 0.00 0.00 2.57
5291 6741 4.084287 AGCTTGTCACATGTCCAAATGAT 58.916 39.130 0.00 0.00 0.00 2.45
5292 6742 3.489355 AGCTTGTCACATGTCCAAATGA 58.511 40.909 0.00 0.00 0.00 2.57
5293 6743 3.504906 AGAGCTTGTCACATGTCCAAATG 59.495 43.478 0.00 0.00 0.00 2.32
5294 6744 3.755378 GAGAGCTTGTCACATGTCCAAAT 59.245 43.478 0.00 0.00 0.00 2.32
5295 6745 3.141398 GAGAGCTTGTCACATGTCCAAA 58.859 45.455 0.00 0.00 0.00 3.28
5296 6746 2.104622 TGAGAGCTTGTCACATGTCCAA 59.895 45.455 0.00 1.04 0.00 3.53
5297 6747 1.693606 TGAGAGCTTGTCACATGTCCA 59.306 47.619 0.00 0.00 0.00 4.02
5298 6748 2.344950 CTGAGAGCTTGTCACATGTCC 58.655 52.381 0.00 0.00 0.00 4.02
5299 6749 1.731160 GCTGAGAGCTTGTCACATGTC 59.269 52.381 0.00 0.00 38.45 3.06
5300 6750 1.071228 TGCTGAGAGCTTGTCACATGT 59.929 47.619 0.00 0.00 42.97 3.21
5301 6751 1.804601 TGCTGAGAGCTTGTCACATG 58.195 50.000 0.00 0.00 42.97 3.21
5302 6752 2.556144 TTGCTGAGAGCTTGTCACAT 57.444 45.000 0.00 0.00 42.97 3.21
5303 6753 2.330440 TTTGCTGAGAGCTTGTCACA 57.670 45.000 0.00 0.00 42.97 3.58
5304 6754 3.698029 TTTTTGCTGAGAGCTTGTCAC 57.302 42.857 0.00 0.00 42.97 3.67
5332 6782 9.810870 ACAGTAAACATTTTTACATACCCCTAA 57.189 29.630 15.08 0.00 46.66 2.69
5333 6783 9.810870 AACAGTAAACATTTTTACATACCCCTA 57.189 29.630 15.08 0.00 46.66 3.53
5334 6784 8.715190 AACAGTAAACATTTTTACATACCCCT 57.285 30.769 15.08 0.00 46.66 4.79
5335 6785 9.767228 AAAACAGTAAACATTTTTACATACCCC 57.233 29.630 15.08 0.00 46.66 4.95
5339 6789 9.262358 GGCCAAAACAGTAAACATTTTTACATA 57.738 29.630 15.08 0.00 46.66 2.29
5340 6790 7.227711 GGGCCAAAACAGTAAACATTTTTACAT 59.772 33.333 15.08 2.34 46.66 2.29
5341 6791 6.539103 GGGCCAAAACAGTAAACATTTTTACA 59.461 34.615 15.08 0.00 46.66 2.41
5342 6792 6.292435 CGGGCCAAAACAGTAAACATTTTTAC 60.292 38.462 4.39 6.41 45.22 2.01
5343 6793 5.753921 CGGGCCAAAACAGTAAACATTTTTA 59.246 36.000 4.39 0.00 0.00 1.52
5344 6794 4.572795 CGGGCCAAAACAGTAAACATTTTT 59.427 37.500 4.39 0.00 0.00 1.94
5345 6795 4.123506 CGGGCCAAAACAGTAAACATTTT 58.876 39.130 4.39 0.00 0.00 1.82
5346 6796 3.385111 TCGGGCCAAAACAGTAAACATTT 59.615 39.130 4.39 0.00 0.00 2.32
5347 6797 2.959707 TCGGGCCAAAACAGTAAACATT 59.040 40.909 4.39 0.00 0.00 2.71
5348 6798 2.588620 TCGGGCCAAAACAGTAAACAT 58.411 42.857 4.39 0.00 0.00 2.71
5349 6799 2.054232 TCGGGCCAAAACAGTAAACA 57.946 45.000 4.39 0.00 0.00 2.83
5350 6800 3.653539 AATCGGGCCAAAACAGTAAAC 57.346 42.857 4.39 0.00 0.00 2.01
5351 6801 5.712917 AGATAAATCGGGCCAAAACAGTAAA 59.287 36.000 4.39 0.00 0.00 2.01
5352 6802 5.258051 AGATAAATCGGGCCAAAACAGTAA 58.742 37.500 4.39 0.00 0.00 2.24
5353 6803 4.850680 AGATAAATCGGGCCAAAACAGTA 58.149 39.130 4.39 0.00 0.00 2.74
5354 6804 3.697166 AGATAAATCGGGCCAAAACAGT 58.303 40.909 4.39 0.00 0.00 3.55
5355 6805 4.718940 AAGATAAATCGGGCCAAAACAG 57.281 40.909 4.39 0.00 0.00 3.16
5356 6806 5.476091 AAAAGATAAATCGGGCCAAAACA 57.524 34.783 4.39 0.00 0.00 2.83
5376 6826 1.971481 TGAGCAGCTCTCAGCAAAAA 58.029 45.000 23.15 0.00 46.34 1.94
5377 6827 3.711937 TGAGCAGCTCTCAGCAAAA 57.288 47.368 23.15 0.00 46.34 2.44
5384 6834 0.822811 TGGACATCTGAGCAGCTCTC 59.177 55.000 23.15 11.57 42.23 3.20
5385 6835 1.273759 TTGGACATCTGAGCAGCTCT 58.726 50.000 23.15 2.04 0.00 4.09
5386 6836 2.105006 TTTGGACATCTGAGCAGCTC 57.895 50.000 16.21 16.21 0.00 4.09
5387 6837 2.026542 TCATTTGGACATCTGAGCAGCT 60.027 45.455 0.00 0.00 0.00 4.24
5388 6838 2.097142 GTCATTTGGACATCTGAGCAGC 59.903 50.000 0.00 0.00 46.19 5.25
5402 6852 5.221880 TCGCTCCAAATTTCAAGTCATTTG 58.778 37.500 0.00 0.00 39.25 2.32
5403 6853 5.452078 TCGCTCCAAATTTCAAGTCATTT 57.548 34.783 0.00 0.00 0.00 2.32
5404 6854 4.616835 GCTCGCTCCAAATTTCAAGTCATT 60.617 41.667 0.00 0.00 0.00 2.57
5405 6855 3.119708 GCTCGCTCCAAATTTCAAGTCAT 60.120 43.478 0.00 0.00 0.00 3.06
5406 6856 2.226437 GCTCGCTCCAAATTTCAAGTCA 59.774 45.455 0.00 0.00 0.00 3.41
5407 6857 2.414691 GGCTCGCTCCAAATTTCAAGTC 60.415 50.000 0.00 0.00 0.00 3.01
5408 6858 1.541588 GGCTCGCTCCAAATTTCAAGT 59.458 47.619 0.00 0.00 0.00 3.16
5409 6859 1.815003 AGGCTCGCTCCAAATTTCAAG 59.185 47.619 0.00 0.00 0.00 3.02
5410 6860 1.812571 GAGGCTCGCTCCAAATTTCAA 59.187 47.619 0.00 0.00 0.00 2.69
5411 6861 1.271325 TGAGGCTCGCTCCAAATTTCA 60.271 47.619 10.42 0.00 0.00 2.69
5412 6862 1.131315 GTGAGGCTCGCTCCAAATTTC 59.869 52.381 20.43 0.00 0.00 2.17
5413 6863 1.168714 GTGAGGCTCGCTCCAAATTT 58.831 50.000 20.43 0.00 0.00 1.82
5414 6864 1.021390 CGTGAGGCTCGCTCCAAATT 61.021 55.000 24.23 0.00 0.00 1.82
5415 6865 1.448540 CGTGAGGCTCGCTCCAAAT 60.449 57.895 24.23 0.00 0.00 2.32
5416 6866 2.048222 CGTGAGGCTCGCTCCAAA 60.048 61.111 24.23 0.00 0.00 3.28
5423 6873 0.729116 AATTTGATGCGTGAGGCTCG 59.271 50.000 10.42 0.00 44.05 5.03
5424 6874 1.470098 ACAATTTGATGCGTGAGGCTC 59.530 47.619 7.79 7.79 44.05 4.70
5425 6875 1.470098 GACAATTTGATGCGTGAGGCT 59.530 47.619 2.79 0.00 44.05 4.58
5426 6876 1.470098 AGACAATTTGATGCGTGAGGC 59.530 47.619 2.79 0.00 43.96 4.70
5427 6877 3.063997 GGTAGACAATTTGATGCGTGAGG 59.936 47.826 2.79 0.00 0.00 3.86
5428 6878 3.242091 CGGTAGACAATTTGATGCGTGAG 60.242 47.826 2.79 0.00 0.00 3.51
5429 6879 2.670905 CGGTAGACAATTTGATGCGTGA 59.329 45.455 2.79 0.00 0.00 4.35
5430 6880 2.787723 GCGGTAGACAATTTGATGCGTG 60.788 50.000 2.79 0.00 0.00 5.34
5431 6881 1.396996 GCGGTAGACAATTTGATGCGT 59.603 47.619 2.79 0.00 0.00 5.24
5432 6882 1.396648 TGCGGTAGACAATTTGATGCG 59.603 47.619 2.79 0.00 0.00 4.73
5433 6883 2.161410 TGTGCGGTAGACAATTTGATGC 59.839 45.455 2.79 0.00 0.00 3.91
5434 6884 4.418013 TTGTGCGGTAGACAATTTGATG 57.582 40.909 2.79 0.00 0.00 3.07
5435 6885 5.643379 ATTTGTGCGGTAGACAATTTGAT 57.357 34.783 2.79 0.00 33.41 2.57
5436 6886 5.446143 AATTTGTGCGGTAGACAATTTGA 57.554 34.783 2.79 0.00 33.41 2.69
5437 6887 6.019156 ACAAAATTTGTGCGGTAGACAATTTG 60.019 34.615 10.91 0.00 43.48 2.32
5438 6888 6.045955 ACAAAATTTGTGCGGTAGACAATTT 58.954 32.000 10.91 0.00 43.48 1.82
5439 6889 5.596845 ACAAAATTTGTGCGGTAGACAATT 58.403 33.333 10.91 0.00 43.48 2.32
5440 6890 5.195001 ACAAAATTTGTGCGGTAGACAAT 57.805 34.783 10.91 0.00 43.48 2.71
5441 6891 4.640789 ACAAAATTTGTGCGGTAGACAA 57.359 36.364 10.91 0.00 43.48 3.18
5442 6892 4.640789 AACAAAATTTGTGCGGTAGACA 57.359 36.364 12.50 0.00 44.59 3.41
5443 6893 5.276631 CCAAAACAAAATTTGTGCGGTAGAC 60.277 40.000 12.50 0.00 44.59 2.59
5444 6894 4.806247 CCAAAACAAAATTTGTGCGGTAGA 59.194 37.500 12.50 0.00 44.59 2.59
5445 6895 4.806247 TCCAAAACAAAATTTGTGCGGTAG 59.194 37.500 12.50 0.53 44.59 3.18
5446 6896 4.755411 TCCAAAACAAAATTTGTGCGGTA 58.245 34.783 12.50 0.00 44.59 4.02
5447 6897 3.600388 TCCAAAACAAAATTTGTGCGGT 58.400 36.364 12.50 0.00 44.59 5.68
5448 6898 4.809815 ATCCAAAACAAAATTTGTGCGG 57.190 36.364 12.50 12.52 44.59 5.69
5449 6899 7.503549 AAAAATCCAAAACAAAATTTGTGCG 57.496 28.000 12.50 4.06 44.59 5.34
5493 6943 9.757227 CAACACCCTTTTAGAAAACAAATCATA 57.243 29.630 0.00 0.00 0.00 2.15
5494 6944 8.482128 TCAACACCCTTTTAGAAAACAAATCAT 58.518 29.630 0.00 0.00 0.00 2.45
5495 6945 7.841956 TCAACACCCTTTTAGAAAACAAATCA 58.158 30.769 0.00 0.00 0.00 2.57
5496 6946 8.764287 CATCAACACCCTTTTAGAAAACAAATC 58.236 33.333 0.00 0.00 0.00 2.17
5497 6947 8.482128 TCATCAACACCCTTTTAGAAAACAAAT 58.518 29.630 0.00 0.00 0.00 2.32
5498 6948 7.841956 TCATCAACACCCTTTTAGAAAACAAA 58.158 30.769 0.00 0.00 0.00 2.83
5499 6949 7.411486 TCATCAACACCCTTTTAGAAAACAA 57.589 32.000 0.00 0.00 0.00 2.83
5500 6950 6.460953 GCTCATCAACACCCTTTTAGAAAACA 60.461 38.462 0.00 0.00 0.00 2.83
5501 6951 5.920840 GCTCATCAACACCCTTTTAGAAAAC 59.079 40.000 0.00 0.00 0.00 2.43
5502 6952 5.010617 GGCTCATCAACACCCTTTTAGAAAA 59.989 40.000 0.00 0.00 0.00 2.29
5503 6953 4.522789 GGCTCATCAACACCCTTTTAGAAA 59.477 41.667 0.00 0.00 0.00 2.52
5504 6954 4.079253 GGCTCATCAACACCCTTTTAGAA 58.921 43.478 0.00 0.00 0.00 2.10
5505 6955 3.330701 AGGCTCATCAACACCCTTTTAGA 59.669 43.478 0.00 0.00 0.00 2.10
5506 6956 3.441572 CAGGCTCATCAACACCCTTTTAG 59.558 47.826 0.00 0.00 0.00 1.85
5507 6957 3.420893 CAGGCTCATCAACACCCTTTTA 58.579 45.455 0.00 0.00 0.00 1.52
5508 6958 2.242043 CAGGCTCATCAACACCCTTTT 58.758 47.619 0.00 0.00 0.00 2.27
5509 6959 1.548582 CCAGGCTCATCAACACCCTTT 60.549 52.381 0.00 0.00 0.00 3.11
5510 6960 0.038744 CCAGGCTCATCAACACCCTT 59.961 55.000 0.00 0.00 0.00 3.95
5511 6961 1.687612 CCAGGCTCATCAACACCCT 59.312 57.895 0.00 0.00 0.00 4.34
5512 6962 1.379044 CCCAGGCTCATCAACACCC 60.379 63.158 0.00 0.00 0.00 4.61
5513 6963 2.048603 GCCCAGGCTCATCAACACC 61.049 63.158 0.08 0.00 38.26 4.16
5514 6964 1.303561 TGCCCAGGCTCATCAACAC 60.304 57.895 10.58 0.00 42.51 3.32
5515 6965 1.303561 GTGCCCAGGCTCATCAACA 60.304 57.895 10.58 0.00 42.51 3.33
5516 6966 2.048603 GGTGCCCAGGCTCATCAAC 61.049 63.158 10.58 0.00 42.51 3.18
5517 6967 2.079088 TTGGTGCCCAGGCTCATCAA 62.079 55.000 10.58 6.14 42.51 2.57
5518 6968 2.079088 TTTGGTGCCCAGGCTCATCA 62.079 55.000 10.58 0.00 42.51 3.07
5519 6969 0.899717 TTTTGGTGCCCAGGCTCATC 60.900 55.000 10.58 0.00 42.51 2.92
5520 6970 1.155859 TTTTGGTGCCCAGGCTCAT 59.844 52.632 10.58 0.00 42.51 2.90
5521 6971 1.832167 GTTTTGGTGCCCAGGCTCA 60.832 57.895 10.58 5.75 42.51 4.26
5522 6972 1.832167 TGTTTTGGTGCCCAGGCTC 60.832 57.895 10.58 6.18 42.51 4.70
5523 6973 2.133641 GTGTTTTGGTGCCCAGGCT 61.134 57.895 10.58 0.00 42.51 4.58
5524 6974 2.421314 GTGTTTTGGTGCCCAGGC 59.579 61.111 0.38 0.38 42.35 4.85
5525 6975 2.506957 GGGTGTTTTGGTGCCCAGG 61.507 63.158 0.00 0.00 40.76 4.45
5526 6976 0.178975 TAGGGTGTTTTGGTGCCCAG 60.179 55.000 0.00 0.00 43.42 4.45
5527 6977 0.468400 GTAGGGTGTTTTGGTGCCCA 60.468 55.000 0.00 0.00 43.42 5.36
5528 6978 0.178973 AGTAGGGTGTTTTGGTGCCC 60.179 55.000 0.00 0.00 41.36 5.36
5529 6979 1.244816 GAGTAGGGTGTTTTGGTGCC 58.755 55.000 0.00 0.00 0.00 5.01
5530 6980 1.975660 TGAGTAGGGTGTTTTGGTGC 58.024 50.000 0.00 0.00 0.00 5.01
5531 6981 3.067601 GGTTTGAGTAGGGTGTTTTGGTG 59.932 47.826 0.00 0.00 0.00 4.17
5532 6982 3.293337 GGTTTGAGTAGGGTGTTTTGGT 58.707 45.455 0.00 0.00 0.00 3.67
5533 6983 3.292460 TGGTTTGAGTAGGGTGTTTTGG 58.708 45.455 0.00 0.00 0.00 3.28
5534 6984 4.993029 TTGGTTTGAGTAGGGTGTTTTG 57.007 40.909 0.00 0.00 0.00 2.44
5535 6985 5.205056 TCATTGGTTTGAGTAGGGTGTTTT 58.795 37.500 0.00 0.00 0.00 2.43
5536 6986 4.798882 TCATTGGTTTGAGTAGGGTGTTT 58.201 39.130 0.00 0.00 0.00 2.83
5537 6987 4.447138 TCATTGGTTTGAGTAGGGTGTT 57.553 40.909 0.00 0.00 0.00 3.32
5538 6988 4.657814 ATCATTGGTTTGAGTAGGGTGT 57.342 40.909 0.00 0.00 0.00 4.16
5539 6989 5.256474 AGAATCATTGGTTTGAGTAGGGTG 58.744 41.667 0.00 0.00 0.00 4.61
5540 6990 5.520748 AGAATCATTGGTTTGAGTAGGGT 57.479 39.130 0.00 0.00 0.00 4.34
5541 6991 8.525290 AAATAGAATCATTGGTTTGAGTAGGG 57.475 34.615 0.00 0.00 0.00 3.53
5611 7061 8.504005 CGAGAACTCAAGAGGCTTTTTATTTTA 58.496 33.333 1.73 0.00 0.00 1.52
5628 7079 8.746530 ACAGTTTTTAGGTATATCGAGAACTCA 58.253 33.333 0.00 0.00 0.00 3.41
5640 7091 8.718734 GTTCGAAGATGAACAGTTTTTAGGTAT 58.281 33.333 0.00 0.00 45.92 2.73
5662 7113 2.165845 ACGGAGGGAGTATTTCAGTTCG 59.834 50.000 0.00 0.00 0.00 3.95
5694 7146 6.016610 GTGTGGCCTTAGTTCAAATGAAGTAA 60.017 38.462 17.87 17.87 43.67 2.24
5695 7147 5.472137 GTGTGGCCTTAGTTCAAATGAAGTA 59.528 40.000 3.32 6.61 38.53 2.24
5696 7148 4.278419 GTGTGGCCTTAGTTCAAATGAAGT 59.722 41.667 3.32 8.43 40.50 3.01
5697 7149 4.278170 TGTGTGGCCTTAGTTCAAATGAAG 59.722 41.667 3.32 0.00 34.27 3.02
5713 7165 7.029563 CCTTCATTCTAAAATAAGTGTGTGGC 58.970 38.462 0.00 0.00 0.00 5.01
5761 7213 8.188799 AGTTGCATCTTGAAGATTACATTCATG 58.811 33.333 4.67 0.00 36.60 3.07
5804 7256 9.632969 CAAATGCTTACACTAACGTATTCATAC 57.367 33.333 0.00 0.00 0.00 2.39


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.