Multiple sequence alignment - TraesCS6A01G069600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G069600 chr6A 100.000 2666 0 0 1 2666 37709465 37706800 0.000000e+00 4924
1 TraesCS6A01G069600 chr6A 80.901 555 87 15 1914 2466 38460671 38460134 1.140000e-113 420
2 TraesCS6A01G069600 chr6A 81.720 465 79 6 1962 2425 38446443 38445984 1.500000e-102 383
3 TraesCS6A01G069600 chr6A 79.570 558 93 17 1914 2466 37844600 37844059 1.940000e-101 379
4 TraesCS6A01G069600 chr6B 89.708 1778 109 32 795 2531 69720304 69718560 0.000000e+00 2202
5 TraesCS6A01G069600 chr6B 82.676 1495 194 43 1012 2464 69959215 69957744 0.000000e+00 1266
6 TraesCS6A01G069600 chr6B 74.892 928 192 24 994 1899 70571600 70570692 4.160000e-103 385
7 TraesCS6A01G069600 chr6B 82.007 289 23 15 780 1040 69959501 69959214 4.470000e-53 219
8 TraesCS6A01G069600 chr6B 95.349 129 3 3 2540 2666 69718428 69718301 4.500000e-48 202
9 TraesCS6A01G069600 chr6D 93.873 816 36 8 1856 2666 33148121 33147315 0.000000e+00 1218
10 TraesCS6A01G069600 chr6D 82.567 522 71 18 1950 2466 34322715 34322209 2.440000e-120 442
11 TraesCS6A01G069600 chr6D 81.434 544 80 16 1930 2466 33304567 33304038 2.450000e-115 425
12 TraesCS6A01G069600 chr6D 81.466 464 79 7 1962 2424 34296582 34296125 9.010000e-100 374
13 TraesCS6A01G069600 chr6D 72.598 916 209 29 1000 1900 34323726 34322838 2.040000e-66 263
14 TraesCS6A01G069600 chr7D 76.659 437 78 16 1035 1457 40646602 40647028 1.240000e-53 220
15 TraesCS6A01G069600 chr7D 75.692 325 65 11 1043 1362 50741599 50741284 1.650000e-32 150
16 TraesCS6A01G069600 chr2D 73.645 535 109 22 257 768 178489927 178490452 7.580000e-41 178
17 TraesCS6A01G069600 chr4A 73.894 452 94 15 1061 1497 647340321 647339879 2.750000e-35 159
18 TraesCS6A01G069600 chr4A 83.942 137 22 0 1043 1179 665842280 665842416 5.990000e-27 132


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G069600 chr6A 37706800 37709465 2665 True 4924.0 4924 100.0000 1 2666 1 chr6A.!!$R1 2665
1 TraesCS6A01G069600 chr6A 38460134 38460671 537 True 420.0 420 80.9010 1914 2466 1 chr6A.!!$R4 552
2 TraesCS6A01G069600 chr6A 37844059 37844600 541 True 379.0 379 79.5700 1914 2466 1 chr6A.!!$R2 552
3 TraesCS6A01G069600 chr6B 69718301 69720304 2003 True 1202.0 2202 92.5285 795 2666 2 chr6B.!!$R2 1871
4 TraesCS6A01G069600 chr6B 69957744 69959501 1757 True 742.5 1266 82.3415 780 2464 2 chr6B.!!$R3 1684
5 TraesCS6A01G069600 chr6B 70570692 70571600 908 True 385.0 385 74.8920 994 1899 1 chr6B.!!$R1 905
6 TraesCS6A01G069600 chr6D 33147315 33148121 806 True 1218.0 1218 93.8730 1856 2666 1 chr6D.!!$R1 810
7 TraesCS6A01G069600 chr6D 33304038 33304567 529 True 425.0 425 81.4340 1930 2466 1 chr6D.!!$R2 536
8 TraesCS6A01G069600 chr6D 34322209 34323726 1517 True 352.5 442 77.5825 1000 2466 2 chr6D.!!$R4 1466

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
919 926 0.031721 AATTCCTATCGTCGTCGGCC 59.968 55.0 1.55 0.0 37.69 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1831 1925 1.149174 CACCACCCAGAAGCACAGT 59.851 57.895 0.0 0.0 0.0 3.55 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.763671 GGTTGTCAGGGTTGCAGG 58.236 61.111 0.00 0.00 0.00 4.85
18 19 2.564721 GGTTGTCAGGGTTGCAGGC 61.565 63.158 0.00 0.00 0.00 4.85
19 20 2.203480 TTGTCAGGGTTGCAGGCC 60.203 61.111 0.00 0.00 0.00 5.19
20 21 3.067084 TTGTCAGGGTTGCAGGCCA 62.067 57.895 5.01 0.00 0.00 5.36
21 22 2.674380 GTCAGGGTTGCAGGCCAG 60.674 66.667 5.01 0.00 0.00 4.85
22 23 2.853542 TCAGGGTTGCAGGCCAGA 60.854 61.111 5.01 5.90 0.00 3.86
23 24 2.360852 CAGGGTTGCAGGCCAGAG 60.361 66.667 5.01 0.00 0.00 3.35
24 25 4.357279 AGGGTTGCAGGCCAGAGC 62.357 66.667 5.01 6.72 38.76 4.09
26 27 4.704833 GGTTGCAGGCCAGAGCGA 62.705 66.667 5.01 2.59 41.24 4.93
27 28 2.669569 GTTGCAGGCCAGAGCGAA 60.670 61.111 5.01 0.85 41.24 4.70
28 29 2.669569 TTGCAGGCCAGAGCGAAC 60.670 61.111 5.01 0.00 41.24 3.95
29 30 4.704833 TGCAGGCCAGAGCGAACC 62.705 66.667 5.01 0.00 41.24 3.62
31 32 4.785453 CAGGCCAGAGCGAACCCC 62.785 72.222 5.01 0.00 41.24 4.95
34 35 4.785453 GCCAGAGCGAACCCCCAG 62.785 72.222 0.00 0.00 0.00 4.45
35 36 3.003173 CCAGAGCGAACCCCCAGA 61.003 66.667 0.00 0.00 0.00 3.86
36 37 2.370445 CCAGAGCGAACCCCCAGAT 61.370 63.158 0.00 0.00 0.00 2.90
37 38 1.604378 CAGAGCGAACCCCCAGATT 59.396 57.895 0.00 0.00 0.00 2.40
38 39 0.745845 CAGAGCGAACCCCCAGATTG 60.746 60.000 0.00 0.00 0.00 2.67
39 40 1.452108 GAGCGAACCCCCAGATTGG 60.452 63.158 0.00 0.00 37.25 3.16
84 85 5.571784 TTTGTTTTCAAAATGCCATGCAA 57.428 30.435 0.00 0.00 45.30 4.08
85 86 5.571784 TTGTTTTCAAAATGCCATGCAAA 57.428 30.435 0.00 0.00 38.35 3.68
86 87 4.918037 TGTTTTCAAAATGCCATGCAAAC 58.082 34.783 0.00 0.00 43.62 2.93
87 88 4.639310 TGTTTTCAAAATGCCATGCAAACT 59.361 33.333 0.00 0.00 43.62 2.66
88 89 5.125097 TGTTTTCAAAATGCCATGCAAACTT 59.875 32.000 0.00 0.00 43.62 2.66
89 90 5.421212 TTTCAAAATGCCATGCAAACTTC 57.579 34.783 0.00 0.00 43.62 3.01
90 91 4.069300 TCAAAATGCCATGCAAACTTCA 57.931 36.364 0.00 0.00 43.62 3.02
91 92 4.449131 TCAAAATGCCATGCAAACTTCAA 58.551 34.783 0.00 0.00 43.62 2.69
92 93 4.880120 TCAAAATGCCATGCAAACTTCAAA 59.120 33.333 0.00 0.00 43.62 2.69
93 94 5.356190 TCAAAATGCCATGCAAACTTCAAAA 59.644 32.000 0.00 0.00 43.62 2.44
94 95 4.816786 AATGCCATGCAAACTTCAAAAC 57.183 36.364 0.00 0.00 43.62 2.43
95 96 3.540314 TGCCATGCAAACTTCAAAACT 57.460 38.095 0.00 0.00 34.76 2.66
96 97 3.196463 TGCCATGCAAACTTCAAAACTG 58.804 40.909 0.00 0.00 34.76 3.16
97 98 2.032636 GCCATGCAAACTTCAAAACTGC 60.033 45.455 0.00 0.00 0.00 4.40
98 99 2.545106 CCATGCAAACTTCAAAACTGCC 59.455 45.455 0.00 0.00 31.92 4.85
99 100 3.196463 CATGCAAACTTCAAAACTGCCA 58.804 40.909 0.00 0.00 31.92 4.92
100 101 3.540314 TGCAAACTTCAAAACTGCCAT 57.460 38.095 0.00 0.00 31.92 4.40
101 102 3.456280 TGCAAACTTCAAAACTGCCATC 58.544 40.909 0.00 0.00 31.92 3.51
102 103 2.802247 GCAAACTTCAAAACTGCCATCC 59.198 45.455 0.00 0.00 0.00 3.51
103 104 3.493176 GCAAACTTCAAAACTGCCATCCT 60.493 43.478 0.00 0.00 0.00 3.24
104 105 4.696455 CAAACTTCAAAACTGCCATCCTT 58.304 39.130 0.00 0.00 0.00 3.36
105 106 5.118286 CAAACTTCAAAACTGCCATCCTTT 58.882 37.500 0.00 0.00 0.00 3.11
106 107 6.279882 CAAACTTCAAAACTGCCATCCTTTA 58.720 36.000 0.00 0.00 0.00 1.85
107 108 6.478512 AACTTCAAAACTGCCATCCTTTAA 57.521 33.333 0.00 0.00 0.00 1.52
108 109 6.478512 ACTTCAAAACTGCCATCCTTTAAA 57.521 33.333 0.00 0.00 0.00 1.52
109 110 6.280643 ACTTCAAAACTGCCATCCTTTAAAC 58.719 36.000 0.00 0.00 0.00 2.01
110 111 6.098266 ACTTCAAAACTGCCATCCTTTAAACT 59.902 34.615 0.00 0.00 0.00 2.66
111 112 6.478512 TCAAAACTGCCATCCTTTAAACTT 57.521 33.333 0.00 0.00 0.00 2.66
112 113 6.883744 TCAAAACTGCCATCCTTTAAACTTT 58.116 32.000 0.00 0.00 0.00 2.66
113 114 8.012957 TCAAAACTGCCATCCTTTAAACTTTA 57.987 30.769 0.00 0.00 0.00 1.85
114 115 8.478877 TCAAAACTGCCATCCTTTAAACTTTAA 58.521 29.630 0.00 0.00 0.00 1.52
115 116 9.103861 CAAAACTGCCATCCTTTAAACTTTAAA 57.896 29.630 6.55 6.55 0.00 1.52
116 117 9.674068 AAAACTGCCATCCTTTAAACTTTAAAA 57.326 25.926 7.86 0.00 0.00 1.52
117 118 8.657074 AACTGCCATCCTTTAAACTTTAAAAC 57.343 30.769 7.86 0.00 0.00 2.43
118 119 8.018537 ACTGCCATCCTTTAAACTTTAAAACT 57.981 30.769 7.86 0.00 0.00 2.66
119 120 7.926018 ACTGCCATCCTTTAAACTTTAAAACTG 59.074 33.333 7.86 5.96 0.00 3.16
120 121 6.704050 TGCCATCCTTTAAACTTTAAAACTGC 59.296 34.615 7.86 7.16 0.00 4.40
121 122 6.147164 GCCATCCTTTAAACTTTAAAACTGCC 59.853 38.462 7.86 0.00 0.00 4.85
122 123 7.213678 CCATCCTTTAAACTTTAAAACTGCCA 58.786 34.615 7.86 0.00 0.00 4.92
123 124 7.877612 CCATCCTTTAAACTTTAAAACTGCCAT 59.122 33.333 7.86 0.00 0.00 4.40
124 125 8.925700 CATCCTTTAAACTTTAAAACTGCCATC 58.074 33.333 7.86 0.00 0.00 3.51
125 126 7.438564 TCCTTTAAACTTTAAAACTGCCATCC 58.561 34.615 7.86 0.00 0.00 3.51
126 127 7.289084 TCCTTTAAACTTTAAAACTGCCATCCT 59.711 33.333 7.86 0.00 0.00 3.24
127 128 7.598869 CCTTTAAACTTTAAAACTGCCATCCTC 59.401 37.037 7.86 0.00 0.00 3.71
128 129 7.833285 TTAAACTTTAAAACTGCCATCCTCT 57.167 32.000 0.00 0.00 0.00 3.69
129 130 8.927675 TTAAACTTTAAAACTGCCATCCTCTA 57.072 30.769 0.00 0.00 0.00 2.43
130 131 7.833285 AAACTTTAAAACTGCCATCCTCTAA 57.167 32.000 0.00 0.00 0.00 2.10
131 132 7.833285 AACTTTAAAACTGCCATCCTCTAAA 57.167 32.000 0.00 0.00 0.00 1.85
132 133 7.833285 ACTTTAAAACTGCCATCCTCTAAAA 57.167 32.000 0.00 0.00 0.00 1.52
133 134 7.886338 ACTTTAAAACTGCCATCCTCTAAAAG 58.114 34.615 0.00 0.00 0.00 2.27
134 135 7.505923 ACTTTAAAACTGCCATCCTCTAAAAGT 59.494 33.333 0.00 0.00 0.00 2.66
135 136 7.833285 TTAAAACTGCCATCCTCTAAAAGTT 57.167 32.000 0.00 0.00 0.00 2.66
136 137 6.731292 AAAACTGCCATCCTCTAAAAGTTT 57.269 33.333 0.00 0.00 37.84 2.66
137 138 7.833285 AAAACTGCCATCCTCTAAAAGTTTA 57.167 32.000 0.00 0.00 35.84 2.01
138 139 7.833285 AAACTGCCATCCTCTAAAAGTTTAA 57.167 32.000 0.00 0.00 35.30 1.52
139 140 7.833285 AACTGCCATCCTCTAAAAGTTTAAA 57.167 32.000 0.00 0.00 0.00 1.52
140 141 7.833285 ACTGCCATCCTCTAAAAGTTTAAAA 57.167 32.000 0.00 0.00 0.00 1.52
141 142 7.658261 ACTGCCATCCTCTAAAAGTTTAAAAC 58.342 34.615 0.00 0.00 0.00 2.43
142 143 7.505923 ACTGCCATCCTCTAAAAGTTTAAAACT 59.494 33.333 0.00 0.00 45.46 2.66
143 144 8.927675 TGCCATCCTCTAAAAGTTTAAAACTA 57.072 30.769 0.00 0.00 41.91 2.24
144 145 8.789762 TGCCATCCTCTAAAAGTTTAAAACTAC 58.210 33.333 0.00 0.00 41.91 2.73
145 146 9.011095 GCCATCCTCTAAAAGTTTAAAACTACT 57.989 33.333 0.00 0.00 41.91 2.57
172 173 9.995003 ATCCTCTAGATAAAAGATGTCATGAAC 57.005 33.333 0.00 0.00 31.60 3.18
173 174 8.424918 TCCTCTAGATAAAAGATGTCATGAACC 58.575 37.037 0.00 0.00 0.00 3.62
174 175 8.206867 CCTCTAGATAAAAGATGTCATGAACCA 58.793 37.037 0.00 0.00 0.00 3.67
175 176 9.605275 CTCTAGATAAAAGATGTCATGAACCAA 57.395 33.333 0.00 0.00 0.00 3.67
176 177 9.383519 TCTAGATAAAAGATGTCATGAACCAAC 57.616 33.333 0.00 0.00 0.00 3.77
177 178 9.166173 CTAGATAAAAGATGTCATGAACCAACA 57.834 33.333 0.00 0.00 0.00 3.33
178 179 8.408043 AGATAAAAGATGTCATGAACCAACAA 57.592 30.769 0.00 0.00 0.00 2.83
179 180 8.859090 AGATAAAAGATGTCATGAACCAACAAA 58.141 29.630 0.00 0.00 0.00 2.83
180 181 9.643693 GATAAAAGATGTCATGAACCAACAAAT 57.356 29.630 0.00 0.00 0.00 2.32
183 184 8.991243 AAAGATGTCATGAACCAACAAATATG 57.009 30.769 0.00 0.00 0.00 1.78
184 185 6.567050 AGATGTCATGAACCAACAAATATGC 58.433 36.000 0.00 0.00 0.00 3.14
185 186 5.718724 TGTCATGAACCAACAAATATGCA 57.281 34.783 0.00 0.00 0.00 3.96
186 187 6.094193 TGTCATGAACCAACAAATATGCAA 57.906 33.333 0.00 0.00 0.00 4.08
187 188 6.519382 TGTCATGAACCAACAAATATGCAAA 58.481 32.000 0.00 0.00 0.00 3.68
188 189 6.988580 TGTCATGAACCAACAAATATGCAAAA 59.011 30.769 0.00 0.00 0.00 2.44
189 190 7.496920 TGTCATGAACCAACAAATATGCAAAAA 59.503 29.630 0.00 0.00 0.00 1.94
338 339 8.327941 TGTCATCTCTTCTTACTGAAAAATGG 57.672 34.615 0.00 0.00 33.79 3.16
339 340 7.094634 TGTCATCTCTTCTTACTGAAAAATGGC 60.095 37.037 0.00 0.00 33.79 4.40
340 341 6.942005 TCATCTCTTCTTACTGAAAAATGGCA 59.058 34.615 0.00 0.00 33.79 4.92
341 342 7.613022 TCATCTCTTCTTACTGAAAAATGGCAT 59.387 33.333 0.00 0.00 33.79 4.40
342 343 7.383102 TCTCTTCTTACTGAAAAATGGCATC 57.617 36.000 0.00 0.00 33.79 3.91
343 344 7.170965 TCTCTTCTTACTGAAAAATGGCATCT 58.829 34.615 0.00 0.00 33.79 2.90
344 345 7.335422 TCTCTTCTTACTGAAAAATGGCATCTC 59.665 37.037 0.00 0.00 33.79 2.75
345 346 6.375455 TCTTCTTACTGAAAAATGGCATCTCC 59.625 38.462 0.00 0.00 33.79 3.71
346 347 5.819991 TCTTACTGAAAAATGGCATCTCCT 58.180 37.500 0.00 0.00 35.26 3.69
347 348 6.957631 TCTTACTGAAAAATGGCATCTCCTA 58.042 36.000 0.00 0.00 35.26 2.94
348 349 7.402054 TCTTACTGAAAAATGGCATCTCCTAA 58.598 34.615 0.00 0.00 35.26 2.69
349 350 8.055181 TCTTACTGAAAAATGGCATCTCCTAAT 58.945 33.333 0.00 0.00 35.26 1.73
350 351 9.342308 CTTACTGAAAAATGGCATCTCCTAATA 57.658 33.333 0.00 0.00 35.26 0.98
351 352 9.693739 TTACTGAAAAATGGCATCTCCTAATAA 57.306 29.630 0.00 0.00 35.26 1.40
352 353 8.593945 ACTGAAAAATGGCATCTCCTAATAAA 57.406 30.769 0.00 0.00 35.26 1.40
353 354 9.034800 ACTGAAAAATGGCATCTCCTAATAAAA 57.965 29.630 0.00 0.00 35.26 1.52
354 355 9.874205 CTGAAAAATGGCATCTCCTAATAAAAA 57.126 29.630 0.00 0.00 35.26 1.94
358 359 9.822185 AAAATGGCATCTCCTAATAAAAATGTC 57.178 29.630 0.00 0.00 35.26 3.06
359 360 8.773033 AATGGCATCTCCTAATAAAAATGTCT 57.227 30.769 0.00 0.00 35.26 3.41
360 361 7.807977 TGGCATCTCCTAATAAAAATGTCTC 57.192 36.000 0.00 0.00 35.26 3.36
361 362 6.772716 TGGCATCTCCTAATAAAAATGTCTCC 59.227 38.462 0.00 0.00 35.26 3.71
362 363 6.207614 GGCATCTCCTAATAAAAATGTCTCCC 59.792 42.308 0.00 0.00 0.00 4.30
363 364 7.001073 GCATCTCCTAATAAAAATGTCTCCCT 58.999 38.462 0.00 0.00 0.00 4.20
364 365 7.503902 GCATCTCCTAATAAAAATGTCTCCCTT 59.496 37.037 0.00 0.00 0.00 3.95
424 425 8.937634 ATGTGATCTCTTAATTCAAAAATGCC 57.062 30.769 0.00 0.00 0.00 4.40
425 426 7.894708 TGTGATCTCTTAATTCAAAAATGCCA 58.105 30.769 0.00 0.00 0.00 4.92
426 427 8.533657 TGTGATCTCTTAATTCAAAAATGCCAT 58.466 29.630 0.00 0.00 0.00 4.40
427 428 8.814235 GTGATCTCTTAATTCAAAAATGCCATG 58.186 33.333 0.00 0.00 0.00 3.66
428 429 7.493320 TGATCTCTTAATTCAAAAATGCCATGC 59.507 33.333 0.00 0.00 0.00 4.06
429 430 6.699366 TCTCTTAATTCAAAAATGCCATGCA 58.301 32.000 0.00 0.00 44.86 3.96
430 431 6.591062 TCTCTTAATTCAAAAATGCCATGCAC 59.409 34.615 0.00 0.00 43.04 4.57
431 432 6.228995 TCTTAATTCAAAAATGCCATGCACA 58.771 32.000 0.00 0.00 43.04 4.57
432 433 6.709397 TCTTAATTCAAAAATGCCATGCACAA 59.291 30.769 0.00 0.00 43.04 3.33
433 434 5.769484 AATTCAAAAATGCCATGCACAAA 57.231 30.435 0.00 0.00 43.04 2.83
434 435 5.769484 ATTCAAAAATGCCATGCACAAAA 57.231 30.435 0.00 0.00 43.04 2.44
435 436 5.571784 TTCAAAAATGCCATGCACAAAAA 57.428 30.435 0.00 0.00 43.04 1.94
436 437 4.918037 TCAAAAATGCCATGCACAAAAAC 58.082 34.783 0.00 0.00 43.04 2.43
437 438 4.397103 TCAAAAATGCCATGCACAAAAACA 59.603 33.333 0.00 0.00 43.04 2.83
438 439 4.978083 AAAATGCCATGCACAAAAACAA 57.022 31.818 0.00 0.00 43.04 2.83
439 440 4.555348 AAATGCCATGCACAAAAACAAG 57.445 36.364 0.00 0.00 43.04 3.16
440 441 1.297664 TGCCATGCACAAAAACAAGC 58.702 45.000 0.00 0.00 31.71 4.01
441 442 1.134461 TGCCATGCACAAAAACAAGCT 60.134 42.857 0.00 0.00 31.71 3.74
442 443 1.941975 GCCATGCACAAAAACAAGCTT 59.058 42.857 0.00 0.00 0.00 3.74
443 444 2.286536 GCCATGCACAAAAACAAGCTTG 60.287 45.455 24.84 24.84 33.49 4.01
444 445 3.196463 CCATGCACAAAAACAAGCTTGA 58.804 40.909 32.50 7.32 35.05 3.02
445 446 3.001533 CCATGCACAAAAACAAGCTTGAC 59.998 43.478 32.50 10.99 35.05 3.18
446 447 3.591196 TGCACAAAAACAAGCTTGACT 57.409 38.095 32.50 15.96 0.00 3.41
447 448 3.510719 TGCACAAAAACAAGCTTGACTC 58.489 40.909 32.50 12.00 0.00 3.36
448 449 3.056962 TGCACAAAAACAAGCTTGACTCA 60.057 39.130 32.50 14.15 0.00 3.41
449 450 3.925913 GCACAAAAACAAGCTTGACTCAA 59.074 39.130 32.50 0.00 0.00 3.02
450 451 4.388469 GCACAAAAACAAGCTTGACTCAAA 59.612 37.500 32.50 0.00 0.00 2.69
451 452 5.107143 GCACAAAAACAAGCTTGACTCAAAA 60.107 36.000 32.50 0.00 0.00 2.44
452 453 6.565623 GCACAAAAACAAGCTTGACTCAAAAA 60.566 34.615 32.50 0.00 0.00 1.94
484 485 6.523676 AAATGTTTAAATTGCCTTGTGACG 57.476 33.333 0.00 0.00 0.00 4.35
485 486 4.640789 TGTTTAAATTGCCTTGTGACGT 57.359 36.364 0.00 0.00 0.00 4.34
486 487 5.000012 TGTTTAAATTGCCTTGTGACGTT 58.000 34.783 0.00 0.00 0.00 3.99
487 488 4.800993 TGTTTAAATTGCCTTGTGACGTTG 59.199 37.500 0.00 0.00 0.00 4.10
488 489 4.640789 TTAAATTGCCTTGTGACGTTGT 57.359 36.364 0.00 0.00 0.00 3.32
489 490 3.518634 AAATTGCCTTGTGACGTTGTT 57.481 38.095 0.00 0.00 0.00 2.83
490 491 2.774439 ATTGCCTTGTGACGTTGTTC 57.226 45.000 0.00 0.00 0.00 3.18
491 492 1.745232 TTGCCTTGTGACGTTGTTCT 58.255 45.000 0.00 0.00 0.00 3.01
492 493 2.605837 TGCCTTGTGACGTTGTTCTA 57.394 45.000 0.00 0.00 0.00 2.10
493 494 2.907634 TGCCTTGTGACGTTGTTCTAA 58.092 42.857 0.00 0.00 0.00 2.10
494 495 3.271729 TGCCTTGTGACGTTGTTCTAAA 58.728 40.909 0.00 0.00 0.00 1.85
495 496 3.690139 TGCCTTGTGACGTTGTTCTAAAA 59.310 39.130 0.00 0.00 0.00 1.52
496 497 4.336993 TGCCTTGTGACGTTGTTCTAAAAT 59.663 37.500 0.00 0.00 0.00 1.82
497 498 5.163602 TGCCTTGTGACGTTGTTCTAAAATT 60.164 36.000 0.00 0.00 0.00 1.82
498 499 6.038382 TGCCTTGTGACGTTGTTCTAAAATTA 59.962 34.615 0.00 0.00 0.00 1.40
499 500 6.358822 GCCTTGTGACGTTGTTCTAAAATTAC 59.641 38.462 0.00 0.00 0.00 1.89
500 501 7.411274 CCTTGTGACGTTGTTCTAAAATTACA 58.589 34.615 0.00 0.00 0.00 2.41
501 502 7.911205 CCTTGTGACGTTGTTCTAAAATTACAA 59.089 33.333 0.00 0.00 0.00 2.41
502 503 9.279904 CTTGTGACGTTGTTCTAAAATTACAAA 57.720 29.630 0.00 0.00 33.96 2.83
503 504 9.622004 TTGTGACGTTGTTCTAAAATTACAAAA 57.378 25.926 0.00 0.00 33.96 2.44
504 505 9.063739 TGTGACGTTGTTCTAAAATTACAAAAC 57.936 29.630 0.00 0.00 33.96 2.43
505 506 9.281075 GTGACGTTGTTCTAAAATTACAAAACT 57.719 29.630 0.00 0.00 33.96 2.66
506 507 9.843334 TGACGTTGTTCTAAAATTACAAAACTT 57.157 25.926 0.00 0.00 33.96 2.66
508 509 9.292846 ACGTTGTTCTAAAATTACAAAACTTCC 57.707 29.630 0.00 0.00 33.96 3.46
509 510 9.291664 CGTTGTTCTAAAATTACAAAACTTCCA 57.708 29.630 0.00 0.00 33.96 3.53
522 523 7.552458 ACAAAACTTCCATGTTGATTTTTCC 57.448 32.000 0.00 0.00 0.00 3.13
523 524 7.337938 ACAAAACTTCCATGTTGATTTTTCCT 58.662 30.769 0.00 0.00 0.00 3.36
524 525 8.482128 ACAAAACTTCCATGTTGATTTTTCCTA 58.518 29.630 0.00 0.00 0.00 2.94
525 526 8.981647 CAAAACTTCCATGTTGATTTTTCCTAG 58.018 33.333 0.00 0.00 0.00 3.02
526 527 8.477419 AAACTTCCATGTTGATTTTTCCTAGA 57.523 30.769 0.00 0.00 0.00 2.43
527 528 7.693969 ACTTCCATGTTGATTTTTCCTAGAG 57.306 36.000 0.00 0.00 0.00 2.43
528 529 7.461749 ACTTCCATGTTGATTTTTCCTAGAGA 58.538 34.615 0.00 0.00 0.00 3.10
529 530 7.944554 ACTTCCATGTTGATTTTTCCTAGAGAA 59.055 33.333 0.00 0.00 0.00 2.87
530 531 8.704849 TTCCATGTTGATTTTTCCTAGAGAAA 57.295 30.769 0.00 0.00 42.82 2.52
531 532 8.884124 TCCATGTTGATTTTTCCTAGAGAAAT 57.116 30.769 7.08 3.41 43.93 2.17
532 533 9.312904 TCCATGTTGATTTTTCCTAGAGAAATT 57.687 29.630 7.08 0.67 43.93 1.82
533 534 9.362539 CCATGTTGATTTTTCCTAGAGAAATTG 57.637 33.333 7.08 0.18 43.93 2.32
534 535 8.866956 CATGTTGATTTTTCCTAGAGAAATTGC 58.133 33.333 7.08 0.00 43.93 3.56
535 536 8.181904 TGTTGATTTTTCCTAGAGAAATTGCT 57.818 30.769 7.08 0.00 43.93 3.91
536 537 9.295825 TGTTGATTTTTCCTAGAGAAATTGCTA 57.704 29.630 7.08 0.00 43.93 3.49
539 540 9.911788 TGATTTTTCCTAGAGAAATTGCTATCT 57.088 29.630 7.08 0.00 43.93 1.98
541 542 8.511604 TTTTTCCTAGAGAAATTGCTATCTGG 57.488 34.615 7.08 0.00 43.93 3.86
542 543 6.814954 TTCCTAGAGAAATTGCTATCTGGT 57.185 37.500 0.00 0.00 0.00 4.00
543 544 7.914427 TTCCTAGAGAAATTGCTATCTGGTA 57.086 36.000 0.00 0.00 0.00 3.25
544 545 7.914427 TCCTAGAGAAATTGCTATCTGGTAA 57.086 36.000 0.00 0.00 0.00 2.85
545 546 8.319057 TCCTAGAGAAATTGCTATCTGGTAAA 57.681 34.615 0.00 0.00 0.00 2.01
546 547 8.768397 TCCTAGAGAAATTGCTATCTGGTAAAA 58.232 33.333 0.00 0.00 0.00 1.52
547 548 9.566432 CCTAGAGAAATTGCTATCTGGTAAAAT 57.434 33.333 0.00 0.00 0.00 1.82
550 551 9.466497 AGAGAAATTGCTATCTGGTAAAATGAA 57.534 29.630 0.00 0.00 0.00 2.57
551 552 9.727627 GAGAAATTGCTATCTGGTAAAATGAAG 57.272 33.333 0.00 0.00 0.00 3.02
552 553 8.689972 AGAAATTGCTATCTGGTAAAATGAAGG 58.310 33.333 0.00 0.00 0.00 3.46
553 554 6.966534 ATTGCTATCTGGTAAAATGAAGGG 57.033 37.500 0.00 0.00 0.00 3.95
554 555 5.708736 TGCTATCTGGTAAAATGAAGGGA 57.291 39.130 0.00 0.00 0.00 4.20
555 556 6.073447 TGCTATCTGGTAAAATGAAGGGAA 57.927 37.500 0.00 0.00 0.00 3.97
556 557 6.489603 TGCTATCTGGTAAAATGAAGGGAAA 58.510 36.000 0.00 0.00 0.00 3.13
557 558 6.951198 TGCTATCTGGTAAAATGAAGGGAAAA 59.049 34.615 0.00 0.00 0.00 2.29
558 559 7.453126 TGCTATCTGGTAAAATGAAGGGAAAAA 59.547 33.333 0.00 0.00 0.00 1.94
583 584 3.516578 GACCGAGAGTCAAACCCAG 57.483 57.895 0.00 0.00 45.55 4.45
584 585 0.037232 GACCGAGAGTCAAACCCAGG 60.037 60.000 0.00 0.00 45.55 4.45
585 586 0.763223 ACCGAGAGTCAAACCCAGGT 60.763 55.000 0.00 0.00 0.00 4.00
586 587 0.320771 CCGAGAGTCAAACCCAGGTG 60.321 60.000 0.00 0.00 0.00 4.00
587 588 0.393077 CGAGAGTCAAACCCAGGTGT 59.607 55.000 0.00 0.00 0.00 4.16
588 589 1.202651 CGAGAGTCAAACCCAGGTGTT 60.203 52.381 0.00 0.00 0.00 3.32
589 590 2.495084 GAGAGTCAAACCCAGGTGTTC 58.505 52.381 0.00 0.00 0.00 3.18
590 591 2.104963 GAGAGTCAAACCCAGGTGTTCT 59.895 50.000 0.00 0.00 0.00 3.01
591 592 3.314693 AGAGTCAAACCCAGGTGTTCTA 58.685 45.455 0.00 0.00 0.00 2.10
592 593 3.325135 AGAGTCAAACCCAGGTGTTCTAG 59.675 47.826 0.00 0.00 0.00 2.43
593 594 3.314693 AGTCAAACCCAGGTGTTCTAGA 58.685 45.455 0.00 0.00 0.00 2.43
594 595 3.910627 AGTCAAACCCAGGTGTTCTAGAT 59.089 43.478 0.00 0.00 0.00 1.98
595 596 5.091552 AGTCAAACCCAGGTGTTCTAGATA 58.908 41.667 0.00 0.00 0.00 1.98
596 597 5.187967 AGTCAAACCCAGGTGTTCTAGATAG 59.812 44.000 0.00 0.00 0.00 2.08
597 598 5.187186 GTCAAACCCAGGTGTTCTAGATAGA 59.813 44.000 0.00 0.00 0.00 1.98
598 599 5.422331 TCAAACCCAGGTGTTCTAGATAGAG 59.578 44.000 0.00 0.00 33.21 2.43
599 600 4.611564 ACCCAGGTGTTCTAGATAGAGT 57.388 45.455 0.00 0.00 33.21 3.24
600 601 4.282496 ACCCAGGTGTTCTAGATAGAGTG 58.718 47.826 0.00 0.00 33.21 3.51
601 602 4.264442 ACCCAGGTGTTCTAGATAGAGTGT 60.264 45.833 0.00 0.00 33.21 3.55
602 603 4.339814 CCCAGGTGTTCTAGATAGAGTGTC 59.660 50.000 0.00 0.00 33.21 3.67
603 604 4.035792 CCAGGTGTTCTAGATAGAGTGTCG 59.964 50.000 0.00 0.00 33.21 4.35
604 605 3.628487 AGGTGTTCTAGATAGAGTGTCGC 59.372 47.826 0.00 0.00 33.21 5.19
605 606 3.546417 GGTGTTCTAGATAGAGTGTCGCG 60.546 52.174 0.00 0.00 33.21 5.87
606 607 2.031807 TGTTCTAGATAGAGTGTCGCGC 59.968 50.000 0.00 0.00 33.21 6.86
607 608 2.242047 TCTAGATAGAGTGTCGCGCT 57.758 50.000 5.56 0.00 0.00 5.92
608 609 1.867865 TCTAGATAGAGTGTCGCGCTG 59.132 52.381 5.56 0.00 0.00 5.18
609 610 0.308068 TAGATAGAGTGTCGCGCTGC 59.692 55.000 5.56 0.00 0.00 5.25
610 611 1.064946 GATAGAGTGTCGCGCTGCT 59.935 57.895 5.56 0.00 0.00 4.24
611 612 0.932585 GATAGAGTGTCGCGCTGCTC 60.933 60.000 5.56 8.39 0.00 4.26
612 613 2.654421 ATAGAGTGTCGCGCTGCTCG 62.654 60.000 5.56 5.55 42.12 5.03
630 631 4.115279 CCAGTGCGATGGCTGTAG 57.885 61.111 0.15 0.00 40.82 2.74
631 632 1.219124 CCAGTGCGATGGCTGTAGT 59.781 57.895 0.15 0.00 40.82 2.73
632 633 1.086067 CCAGTGCGATGGCTGTAGTG 61.086 60.000 0.15 0.00 40.82 2.74
633 634 0.390340 CAGTGCGATGGCTGTAGTGT 60.390 55.000 0.15 0.00 40.82 3.55
634 635 0.321671 AGTGCGATGGCTGTAGTGTT 59.678 50.000 0.15 0.00 40.82 3.32
635 636 0.721718 GTGCGATGGCTGTAGTGTTC 59.278 55.000 0.15 0.00 40.82 3.18
636 637 0.608130 TGCGATGGCTGTAGTGTTCT 59.392 50.000 0.15 0.00 40.82 3.01
637 638 1.002366 GCGATGGCTGTAGTGTTCTG 58.998 55.000 0.00 0.00 35.83 3.02
638 639 1.404181 GCGATGGCTGTAGTGTTCTGA 60.404 52.381 0.00 0.00 35.83 3.27
639 640 2.930887 GCGATGGCTGTAGTGTTCTGAA 60.931 50.000 0.00 0.00 35.83 3.02
640 641 3.325870 CGATGGCTGTAGTGTTCTGAAA 58.674 45.455 0.00 0.00 0.00 2.69
641 642 3.745975 CGATGGCTGTAGTGTTCTGAAAA 59.254 43.478 0.00 0.00 0.00 2.29
642 643 4.393062 CGATGGCTGTAGTGTTCTGAAAAT 59.607 41.667 0.00 0.00 0.00 1.82
643 644 5.580691 CGATGGCTGTAGTGTTCTGAAAATA 59.419 40.000 0.00 0.00 0.00 1.40
644 645 6.455646 CGATGGCTGTAGTGTTCTGAAAATAC 60.456 42.308 0.00 0.00 0.00 1.89
645 646 5.865085 TGGCTGTAGTGTTCTGAAAATACT 58.135 37.500 0.00 0.43 0.00 2.12
646 647 6.296026 TGGCTGTAGTGTTCTGAAAATACTT 58.704 36.000 8.03 0.00 0.00 2.24
647 648 6.426937 TGGCTGTAGTGTTCTGAAAATACTTC 59.573 38.462 8.03 5.12 0.00 3.01
648 649 6.426937 GGCTGTAGTGTTCTGAAAATACTTCA 59.573 38.462 8.03 8.32 0.00 3.02
649 650 7.291567 GCTGTAGTGTTCTGAAAATACTTCAC 58.708 38.462 8.03 3.61 0.00 3.18
650 651 7.171678 GCTGTAGTGTTCTGAAAATACTTCACT 59.828 37.037 10.92 10.92 38.26 3.41
651 652 8.365399 TGTAGTGTTCTGAAAATACTTCACTG 57.635 34.615 14.25 0.00 36.52 3.66
652 653 8.201464 TGTAGTGTTCTGAAAATACTTCACTGA 58.799 33.333 14.25 2.92 36.52 3.41
653 654 7.484035 AGTGTTCTGAAAATACTTCACTGAC 57.516 36.000 6.73 0.00 34.36 3.51
654 655 7.275920 AGTGTTCTGAAAATACTTCACTGACT 58.724 34.615 6.73 0.00 34.36 3.41
655 656 7.770897 AGTGTTCTGAAAATACTTCACTGACTT 59.229 33.333 6.73 0.00 34.36 3.01
656 657 8.398665 GTGTTCTGAAAATACTTCACTGACTTT 58.601 33.333 0.00 0.00 0.00 2.66
657 658 8.956426 TGTTCTGAAAATACTTCACTGACTTTT 58.044 29.630 0.00 0.00 0.00 2.27
658 659 9.788960 GTTCTGAAAATACTTCACTGACTTTTT 57.211 29.630 0.00 0.00 0.00 1.94
687 688 5.574815 AGCGAAATTGTTTTGAAAATCCG 57.425 34.783 0.00 0.00 0.00 4.18
688 689 5.285651 AGCGAAATTGTTTTGAAAATCCGA 58.714 33.333 0.00 0.00 0.00 4.55
689 690 5.174943 AGCGAAATTGTTTTGAAAATCCGAC 59.825 36.000 0.00 0.00 0.00 4.79
690 691 5.585837 CGAAATTGTTTTGAAAATCCGACG 58.414 37.500 0.00 0.00 0.00 5.12
691 692 5.172411 CGAAATTGTTTTGAAAATCCGACGT 59.828 36.000 0.00 0.00 0.00 4.34
692 693 5.881637 AATTGTTTTGAAAATCCGACGTG 57.118 34.783 0.00 0.00 0.00 4.49
693 694 3.341857 TGTTTTGAAAATCCGACGTGG 57.658 42.857 0.00 0.00 40.09 4.94
694 695 2.048498 GTTTTGAAAATCCGACGTGGC 58.952 47.619 0.00 0.00 37.80 5.01
695 696 1.600023 TTTGAAAATCCGACGTGGCT 58.400 45.000 0.00 0.00 37.80 4.75
696 697 1.153353 TTGAAAATCCGACGTGGCTC 58.847 50.000 0.00 0.00 37.80 4.70
697 698 1.011968 TGAAAATCCGACGTGGCTCG 61.012 55.000 7.50 7.50 46.00 5.03
703 704 3.518998 CGACGTGGCTCGGATCCT 61.519 66.667 10.75 0.00 44.69 3.24
704 705 2.184830 CGACGTGGCTCGGATCCTA 61.185 63.158 10.75 0.00 44.69 2.94
705 706 1.359475 GACGTGGCTCGGATCCTAC 59.641 63.158 10.75 0.00 44.69 3.18
706 707 2.331805 CGTGGCTCGGATCCTACG 59.668 66.667 10.75 8.79 35.71 3.51
707 708 2.027751 GTGGCTCGGATCCTACGC 59.972 66.667 10.75 9.08 0.00 4.42
708 709 3.224324 TGGCTCGGATCCTACGCC 61.224 66.667 22.06 22.06 41.06 5.68
709 710 3.224324 GGCTCGGATCCTACGCCA 61.224 66.667 23.23 0.00 40.41 5.69
710 711 2.336809 GCTCGGATCCTACGCCAG 59.663 66.667 10.75 0.00 0.00 4.85
719 720 3.706140 CTACGCCAGGATTCGTGC 58.294 61.111 0.76 0.00 39.46 5.34
720 721 1.153647 CTACGCCAGGATTCGTGCA 60.154 57.895 0.76 0.00 39.46 4.57
721 722 0.739462 CTACGCCAGGATTCGTGCAA 60.739 55.000 0.76 0.00 39.46 4.08
722 723 0.320858 TACGCCAGGATTCGTGCAAA 60.321 50.000 0.76 0.00 39.46 3.68
723 724 1.154225 CGCCAGGATTCGTGCAAAC 60.154 57.895 0.76 0.00 0.00 2.93
724 725 1.154225 GCCAGGATTCGTGCAAACG 60.154 57.895 0.76 0.00 0.00 3.60
725 726 1.573829 GCCAGGATTCGTGCAAACGA 61.574 55.000 0.76 0.00 40.66 3.85
731 732 4.105727 TCGTGCAAACGAAACCGA 57.894 50.000 0.00 0.00 39.34 4.69
732 733 1.637402 TCGTGCAAACGAAACCGAC 59.363 52.632 0.00 0.00 39.34 4.79
733 734 1.716378 CGTGCAAACGAAACCGACG 60.716 57.895 0.00 0.00 34.64 5.12
734 735 1.368374 GTGCAAACGAAACCGACGG 60.368 57.895 13.61 13.61 34.93 4.79
735 736 1.521010 TGCAAACGAAACCGACGGA 60.521 52.632 23.38 0.00 34.93 4.69
736 737 1.088340 TGCAAACGAAACCGACGGAA 61.088 50.000 23.38 0.00 34.93 4.30
737 738 0.383860 GCAAACGAAACCGACGGAAG 60.384 55.000 23.38 10.73 34.93 3.46
738 739 1.210870 CAAACGAAACCGACGGAAGA 58.789 50.000 23.38 0.00 34.93 2.87
739 740 1.796459 CAAACGAAACCGACGGAAGAT 59.204 47.619 23.38 2.81 34.93 2.40
740 741 1.425412 AACGAAACCGACGGAAGATG 58.575 50.000 23.38 8.54 34.93 2.90
741 742 0.389426 ACGAAACCGACGGAAGATGG 60.389 55.000 23.38 6.87 34.93 3.51
742 743 1.082117 CGAAACCGACGGAAGATGGG 61.082 60.000 23.38 0.00 34.13 4.00
743 744 0.743345 GAAACCGACGGAAGATGGGG 60.743 60.000 23.38 0.00 34.13 4.96
744 745 2.814913 AAACCGACGGAAGATGGGGC 62.815 60.000 23.38 0.00 34.13 5.80
745 746 4.891727 CCGACGGAAGATGGGGCG 62.892 72.222 8.64 0.00 0.00 6.13
746 747 4.143333 CGACGGAAGATGGGGCGT 62.143 66.667 0.00 0.00 0.00 5.68
747 748 2.267961 GACGGAAGATGGGGCGTT 59.732 61.111 0.00 0.00 0.00 4.84
748 749 1.814169 GACGGAAGATGGGGCGTTC 60.814 63.158 0.00 0.00 0.00 3.95
749 750 2.890474 CGGAAGATGGGGCGTTCG 60.890 66.667 0.00 0.00 0.00 3.95
750 751 3.202706 GGAAGATGGGGCGTTCGC 61.203 66.667 8.75 8.75 0.00 4.70
751 752 2.125106 GAAGATGGGGCGTTCGCT 60.125 61.111 16.40 0.00 0.00 4.93
752 753 2.436646 AAGATGGGGCGTTCGCTG 60.437 61.111 16.40 0.00 0.00 5.18
753 754 3.976701 AAGATGGGGCGTTCGCTGG 62.977 63.158 16.40 0.00 0.00 4.85
754 755 4.467084 GATGGGGCGTTCGCTGGA 62.467 66.667 16.40 1.70 0.00 3.86
755 756 3.969250 GATGGGGCGTTCGCTGGAA 62.969 63.158 16.40 1.71 0.00 3.53
762 763 3.905249 GTTCGCTGGAACCATCCC 58.095 61.111 0.00 0.00 45.48 3.85
763 764 1.749258 GTTCGCTGGAACCATCCCC 60.749 63.158 0.00 0.00 45.48 4.81
764 765 2.978946 TTCGCTGGAACCATCCCCC 61.979 63.158 0.00 0.00 45.95 5.40
765 766 3.411517 CGCTGGAACCATCCCCCT 61.412 66.667 0.00 0.00 45.95 4.79
766 767 2.276740 GCTGGAACCATCCCCCTG 59.723 66.667 0.00 0.00 45.95 4.45
767 768 2.308722 GCTGGAACCATCCCCCTGA 61.309 63.158 0.00 0.00 45.95 3.86
768 769 1.918253 CTGGAACCATCCCCCTGAG 59.082 63.158 0.00 0.00 45.95 3.35
769 770 1.619363 TGGAACCATCCCCCTGAGG 60.619 63.158 0.00 0.00 45.95 3.86
770 771 1.619669 GGAACCATCCCCCTGAGGT 60.620 63.158 0.00 0.00 40.10 3.85
771 772 1.214992 GGAACCATCCCCCTGAGGTT 61.215 60.000 0.00 0.00 46.39 3.50
772 773 2.398919 AACCATCCCCCTGAGGTTC 58.601 57.895 0.00 0.00 40.12 3.62
773 774 1.562672 AACCATCCCCCTGAGGTTCG 61.563 60.000 0.00 0.00 40.12 3.95
774 775 2.190578 CATCCCCCTGAGGTTCGC 59.809 66.667 0.00 0.00 0.00 4.70
775 776 3.090532 ATCCCCCTGAGGTTCGCC 61.091 66.667 0.00 0.00 37.60 5.54
776 777 3.943137 ATCCCCCTGAGGTTCGCCA 62.943 63.158 0.00 0.00 40.60 5.69
777 778 4.101448 CCCCCTGAGGTTCGCCAG 62.101 72.222 0.00 0.00 40.60 4.85
778 779 3.003173 CCCCTGAGGTTCGCCAGA 61.003 66.667 0.00 0.00 40.60 3.86
784 785 2.288702 CCTGAGGTTCGCCAGATATCTG 60.289 54.545 23.53 23.53 43.40 2.90
797 798 5.747197 GCCAGATATCTGCAAAATCAAACTG 59.253 40.000 24.81 9.27 42.47 3.16
815 817 6.936374 CAAACTGCTATTTGTTTGTTGGAAG 58.064 36.000 9.56 0.00 44.44 3.46
833 835 2.765689 AGGAAATCACAACCAACCCA 57.234 45.000 0.00 0.00 0.00 4.51
836 838 3.777522 AGGAAATCACAACCAACCCAAAA 59.222 39.130 0.00 0.00 0.00 2.44
914 921 4.145807 AGATCTCCAATTCCTATCGTCGT 58.854 43.478 0.00 0.00 0.00 4.34
916 923 2.289820 TCTCCAATTCCTATCGTCGTCG 59.710 50.000 0.00 0.00 38.55 5.12
917 924 1.335810 TCCAATTCCTATCGTCGTCGG 59.664 52.381 1.55 0.00 37.69 4.79
918 925 1.129326 CAATTCCTATCGTCGTCGGC 58.871 55.000 1.55 0.00 37.69 5.54
919 926 0.031721 AATTCCTATCGTCGTCGGCC 59.968 55.000 1.55 0.00 37.69 6.13
920 927 1.803366 ATTCCTATCGTCGTCGGCCC 61.803 60.000 0.00 0.00 37.69 5.80
924 937 2.389866 CTATCGTCGTCGGCCCAGAC 62.390 65.000 0.00 3.27 37.69 3.51
940 953 0.259065 AGACTCCGCCTATCTGTCCA 59.741 55.000 0.00 0.00 0.00 4.02
942 955 1.689273 GACTCCGCCTATCTGTCCATT 59.311 52.381 0.00 0.00 0.00 3.16
943 956 2.103263 GACTCCGCCTATCTGTCCATTT 59.897 50.000 0.00 0.00 0.00 2.32
1019 1059 2.203084 GCCGCCTAGGAAGAAGCC 60.203 66.667 14.75 0.00 45.00 4.35
1183 1259 2.511600 GCCTGCGCATCGTTAGGT 60.512 61.111 12.24 0.00 36.36 3.08
1201 1277 0.507358 GTTCGACGACAAGAAGCACC 59.493 55.000 0.00 0.00 0.00 5.01
1215 1297 4.767255 CACCTCCAGCACCTCCGC 62.767 72.222 0.00 0.00 0.00 5.54
1266 1348 1.589196 GCGCACCGATCTAGACACC 60.589 63.158 0.30 0.00 0.00 4.16
1375 1457 0.678048 GCTCACCCTCCATGTCAACC 60.678 60.000 0.00 0.00 0.00 3.77
1449 1539 0.790207 CGTTGGACCTTCACGATGTG 59.210 55.000 5.75 0.00 34.45 3.21
1559 1649 2.838748 ATCGTCGTGCTCCCTGAGGA 62.839 60.000 0.00 0.00 41.08 3.71
1659 1749 0.037605 AAACTAGTCGGCTTGTCGGG 60.038 55.000 4.22 0.00 30.70 5.14
1730 1821 2.373540 TATCTTGGCGTTAACTGCGT 57.626 45.000 13.57 3.74 0.00 5.24
1787 1878 8.267183 TCATTTCTGTGGAGCTAATGATAAAGA 58.733 33.333 2.40 0.00 30.93 2.52
1791 1885 6.484643 TCTGTGGAGCTAATGATAAAGAATGC 59.515 38.462 0.00 0.00 0.00 3.56
1831 1925 4.471908 ATGATGGCAGCGGCGACA 62.472 61.111 12.98 3.44 42.47 4.35
1900 1994 5.657302 AGATCTCAACGTAGAAAGGTATGGT 59.343 40.000 0.00 0.00 0.00 3.55
1924 2119 7.591426 GGTTTTAATTCGGCATTAGATCATCAC 59.409 37.037 0.00 0.00 0.00 3.06
1995 2195 9.118236 GTATTTTCTTTCCAGTTCATTTTCTCG 57.882 33.333 0.00 0.00 0.00 4.04
2080 2280 0.745845 CGAGGCTCCTGGTTTGGATG 60.746 60.000 9.32 0.00 35.30 3.51
2185 2386 4.253685 GGACAGTAGCTGCATGAGTAAAA 58.746 43.478 4.12 0.00 34.37 1.52
2192 2393 9.869844 CAGTAGCTGCATGAGTAAAATTATTAC 57.130 33.333 4.12 0.00 0.00 1.89
2318 2531 3.592059 TCACGGCACCTTAACATAGTTC 58.408 45.455 0.00 0.00 0.00 3.01
2329 2542 6.204882 ACCTTAACATAGTTCAAGTCAAGTGC 59.795 38.462 0.00 0.00 0.00 4.40
2525 2741 6.438763 AGCAAATAGTGAAGTACAAACTTGC 58.561 36.000 0.00 3.11 46.09 4.01
2531 2748 6.131544 AGTGAAGTACAAACTTGCGAATTT 57.868 33.333 0.00 0.00 46.09 1.82
2597 2937 1.796617 GCATGGAAATCTGAGCGCAAC 60.797 52.381 11.47 3.52 0.00 4.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.564721 GCCTGCAACCCTGACAACC 61.565 63.158 0.00 0.00 0.00 3.77
3 4 3.496309 CTGGCCTGCAACCCTGACA 62.496 63.158 3.32 0.00 0.00 3.58
4 5 2.674380 CTGGCCTGCAACCCTGAC 60.674 66.667 3.32 0.00 0.00 3.51
5 6 2.853542 TCTGGCCTGCAACCCTGA 60.854 61.111 3.32 7.52 0.00 3.86
6 7 2.360852 CTCTGGCCTGCAACCCTG 60.361 66.667 3.32 3.36 0.00 4.45
7 8 4.357279 GCTCTGGCCTGCAACCCT 62.357 66.667 3.32 0.00 0.00 4.34
9 10 4.704833 TCGCTCTGGCCTGCAACC 62.705 66.667 3.32 0.00 34.44 3.77
10 11 2.669569 TTCGCTCTGGCCTGCAAC 60.670 61.111 3.32 0.00 34.44 4.17
11 12 2.669569 GTTCGCTCTGGCCTGCAA 60.670 61.111 3.32 1.12 34.44 4.08
12 13 4.704833 GGTTCGCTCTGGCCTGCA 62.705 66.667 3.32 0.00 34.44 4.41
14 15 4.785453 GGGGTTCGCTCTGGCCTG 62.785 72.222 3.32 2.92 34.44 4.85
17 18 4.785453 CTGGGGGTTCGCTCTGGC 62.785 72.222 0.00 0.00 0.00 4.85
18 19 1.915078 AATCTGGGGGTTCGCTCTGG 61.915 60.000 0.00 0.00 0.00 3.86
19 20 0.745845 CAATCTGGGGGTTCGCTCTG 60.746 60.000 0.00 0.00 0.00 3.35
20 21 1.604378 CAATCTGGGGGTTCGCTCT 59.396 57.895 0.00 0.00 0.00 4.09
21 22 1.452108 CCAATCTGGGGGTTCGCTC 60.452 63.158 0.00 0.00 32.67 5.03
22 23 2.677228 CCAATCTGGGGGTTCGCT 59.323 61.111 0.00 0.00 32.67 4.93
60 61 5.957798 TGCATGGCATTTTGAAAACAAAAA 58.042 29.167 11.16 0.00 37.55 1.94
61 62 5.571784 TGCATGGCATTTTGAAAACAAAA 57.428 30.435 0.00 9.87 38.26 2.44
62 63 5.571784 TTGCATGGCATTTTGAAAACAAA 57.428 30.435 0.00 0.00 38.76 2.83
63 64 5.125097 AGTTTGCATGGCATTTTGAAAACAA 59.875 32.000 20.01 4.62 41.78 2.83
64 65 4.639310 AGTTTGCATGGCATTTTGAAAACA 59.361 33.333 20.01 0.00 41.78 2.83
65 66 5.172460 AGTTTGCATGGCATTTTGAAAAC 57.828 34.783 13.10 13.10 40.31 2.43
66 67 5.356190 TGAAGTTTGCATGGCATTTTGAAAA 59.644 32.000 0.00 0.00 38.76 2.29
67 68 4.880120 TGAAGTTTGCATGGCATTTTGAAA 59.120 33.333 0.00 0.00 38.76 2.69
68 69 4.449131 TGAAGTTTGCATGGCATTTTGAA 58.551 34.783 0.00 0.00 38.76 2.69
69 70 4.069300 TGAAGTTTGCATGGCATTTTGA 57.931 36.364 0.00 0.00 38.76 2.69
70 71 4.815040 TTGAAGTTTGCATGGCATTTTG 57.185 36.364 0.00 0.00 38.76 2.44
71 72 5.357596 AGTTTTGAAGTTTGCATGGCATTTT 59.642 32.000 0.00 0.00 38.76 1.82
72 73 4.883006 AGTTTTGAAGTTTGCATGGCATTT 59.117 33.333 0.00 0.00 38.76 2.32
73 74 4.273969 CAGTTTTGAAGTTTGCATGGCATT 59.726 37.500 0.00 0.00 38.76 3.56
74 75 3.810941 CAGTTTTGAAGTTTGCATGGCAT 59.189 39.130 0.00 0.00 38.76 4.40
75 76 3.196463 CAGTTTTGAAGTTTGCATGGCA 58.804 40.909 0.00 0.00 36.47 4.92
76 77 2.032636 GCAGTTTTGAAGTTTGCATGGC 60.033 45.455 0.00 0.00 34.99 4.40
77 78 2.545106 GGCAGTTTTGAAGTTTGCATGG 59.455 45.455 0.00 0.00 36.53 3.66
78 79 3.196463 TGGCAGTTTTGAAGTTTGCATG 58.804 40.909 0.00 0.00 36.53 4.06
79 80 3.540314 TGGCAGTTTTGAAGTTTGCAT 57.460 38.095 0.00 0.00 36.53 3.96
80 81 3.456280 GATGGCAGTTTTGAAGTTTGCA 58.544 40.909 0.00 0.00 36.53 4.08
81 82 2.802247 GGATGGCAGTTTTGAAGTTTGC 59.198 45.455 0.00 0.00 0.00 3.68
82 83 4.326504 AGGATGGCAGTTTTGAAGTTTG 57.673 40.909 0.00 0.00 0.00 2.93
83 84 5.357742 AAAGGATGGCAGTTTTGAAGTTT 57.642 34.783 0.00 0.00 0.00 2.66
84 85 6.478512 TTAAAGGATGGCAGTTTTGAAGTT 57.521 33.333 0.00 0.00 0.00 2.66
85 86 6.098266 AGTTTAAAGGATGGCAGTTTTGAAGT 59.902 34.615 0.00 0.00 0.00 3.01
86 87 6.515832 AGTTTAAAGGATGGCAGTTTTGAAG 58.484 36.000 0.00 0.00 0.00 3.02
87 88 6.478512 AGTTTAAAGGATGGCAGTTTTGAA 57.521 33.333 0.00 0.00 0.00 2.69
88 89 6.478512 AAGTTTAAAGGATGGCAGTTTTGA 57.521 33.333 0.00 0.00 0.00 2.69
89 90 8.655651 TTAAAGTTTAAAGGATGGCAGTTTTG 57.344 30.769 5.57 0.00 0.00 2.44
90 91 9.674068 TTTTAAAGTTTAAAGGATGGCAGTTTT 57.326 25.926 17.79 0.00 0.00 2.43
91 92 9.104965 GTTTTAAAGTTTAAAGGATGGCAGTTT 57.895 29.630 17.79 0.00 0.00 2.66
92 93 8.482943 AGTTTTAAAGTTTAAAGGATGGCAGTT 58.517 29.630 17.79 0.00 0.00 3.16
93 94 7.926018 CAGTTTTAAAGTTTAAAGGATGGCAGT 59.074 33.333 17.79 5.03 0.00 4.40
94 95 7.095649 GCAGTTTTAAAGTTTAAAGGATGGCAG 60.096 37.037 17.79 7.51 0.00 4.85
95 96 6.704050 GCAGTTTTAAAGTTTAAAGGATGGCA 59.296 34.615 17.79 0.00 0.00 4.92
96 97 6.147164 GGCAGTTTTAAAGTTTAAAGGATGGC 59.853 38.462 23.86 23.86 0.00 4.40
97 98 7.213678 TGGCAGTTTTAAAGTTTAAAGGATGG 58.786 34.615 17.79 10.24 0.00 3.51
98 99 8.831715 ATGGCAGTTTTAAAGTTTAAAGGATG 57.168 30.769 17.79 17.25 0.00 3.51
99 100 8.094548 GGATGGCAGTTTTAAAGTTTAAAGGAT 58.905 33.333 17.79 7.97 0.00 3.24
100 101 7.289084 AGGATGGCAGTTTTAAAGTTTAAAGGA 59.711 33.333 17.79 4.98 0.00 3.36
101 102 7.441836 AGGATGGCAGTTTTAAAGTTTAAAGG 58.558 34.615 17.79 13.46 0.00 3.11
102 103 8.360390 AGAGGATGGCAGTTTTAAAGTTTAAAG 58.640 33.333 17.79 10.06 0.00 1.85
103 104 8.245195 AGAGGATGGCAGTTTTAAAGTTTAAA 57.755 30.769 15.29 15.29 0.00 1.52
104 105 7.833285 AGAGGATGGCAGTTTTAAAGTTTAA 57.167 32.000 3.88 3.88 0.00 1.52
105 106 8.927675 TTAGAGGATGGCAGTTTTAAAGTTTA 57.072 30.769 0.00 0.00 0.00 2.01
106 107 7.833285 TTAGAGGATGGCAGTTTTAAAGTTT 57.167 32.000 0.00 0.00 0.00 2.66
107 108 7.833285 TTTAGAGGATGGCAGTTTTAAAGTT 57.167 32.000 0.00 0.00 0.00 2.66
108 109 7.505923 ACTTTTAGAGGATGGCAGTTTTAAAGT 59.494 33.333 0.00 0.00 0.00 2.66
109 110 7.886338 ACTTTTAGAGGATGGCAGTTTTAAAG 58.114 34.615 0.00 0.00 0.00 1.85
110 111 7.833285 ACTTTTAGAGGATGGCAGTTTTAAA 57.167 32.000 0.00 0.00 0.00 1.52
111 112 7.833285 AACTTTTAGAGGATGGCAGTTTTAA 57.167 32.000 0.00 0.00 0.00 1.52
112 113 7.833285 AAACTTTTAGAGGATGGCAGTTTTA 57.167 32.000 0.00 0.00 30.61 1.52
113 114 6.731292 AAACTTTTAGAGGATGGCAGTTTT 57.269 33.333 0.00 0.00 30.61 2.43
114 115 7.833285 TTAAACTTTTAGAGGATGGCAGTTT 57.167 32.000 0.00 0.00 36.97 2.66
115 116 7.833285 TTTAAACTTTTAGAGGATGGCAGTT 57.167 32.000 0.00 0.00 0.00 3.16
116 117 7.505923 AGTTTTAAACTTTTAGAGGATGGCAGT 59.494 33.333 4.30 0.00 39.04 4.40
117 118 7.886338 AGTTTTAAACTTTTAGAGGATGGCAG 58.114 34.615 4.30 0.00 39.04 4.85
118 119 7.833285 AGTTTTAAACTTTTAGAGGATGGCA 57.167 32.000 4.30 0.00 39.04 4.92
119 120 9.011095 AGTAGTTTTAAACTTTTAGAGGATGGC 57.989 33.333 15.83 0.00 42.81 4.40
146 147 9.995003 GTTCATGACATCTTTTATCTAGAGGAT 57.005 33.333 0.00 0.00 38.38 3.24
147 148 8.424918 GGTTCATGACATCTTTTATCTAGAGGA 58.575 37.037 0.00 0.00 0.00 3.71
148 149 8.206867 TGGTTCATGACATCTTTTATCTAGAGG 58.793 37.037 0.00 0.00 0.00 3.69
149 150 9.605275 TTGGTTCATGACATCTTTTATCTAGAG 57.395 33.333 0.00 0.00 0.00 2.43
150 151 9.383519 GTTGGTTCATGACATCTTTTATCTAGA 57.616 33.333 0.00 0.00 0.00 2.43
151 152 9.166173 TGTTGGTTCATGACATCTTTTATCTAG 57.834 33.333 0.00 0.00 0.00 2.43
152 153 9.513906 TTGTTGGTTCATGACATCTTTTATCTA 57.486 29.630 0.00 0.00 0.00 1.98
153 154 8.408043 TTGTTGGTTCATGACATCTTTTATCT 57.592 30.769 0.00 0.00 0.00 1.98
154 155 9.643693 ATTTGTTGGTTCATGACATCTTTTATC 57.356 29.630 0.00 0.00 0.00 1.75
157 158 9.426837 CATATTTGTTGGTTCATGACATCTTTT 57.573 29.630 0.00 0.00 0.00 2.27
158 159 7.546667 GCATATTTGTTGGTTCATGACATCTTT 59.453 33.333 0.00 0.00 0.00 2.52
159 160 7.037438 GCATATTTGTTGGTTCATGACATCTT 58.963 34.615 0.00 0.00 0.00 2.40
160 161 6.153170 TGCATATTTGTTGGTTCATGACATCT 59.847 34.615 0.00 0.00 0.00 2.90
161 162 6.331845 TGCATATTTGTTGGTTCATGACATC 58.668 36.000 0.00 0.00 0.00 3.06
162 163 6.283544 TGCATATTTGTTGGTTCATGACAT 57.716 33.333 0.00 0.00 0.00 3.06
163 164 5.718724 TGCATATTTGTTGGTTCATGACA 57.281 34.783 0.00 0.00 0.00 3.58
164 165 7.418840 TTTTGCATATTTGTTGGTTCATGAC 57.581 32.000 0.00 0.00 0.00 3.06
312 313 8.954350 CCATTTTTCAGTAAGAAGAGATGACAT 58.046 33.333 0.00 0.00 37.57 3.06
313 314 7.094634 GCCATTTTTCAGTAAGAAGAGATGACA 60.095 37.037 0.00 0.00 37.57 3.58
314 315 7.094634 TGCCATTTTTCAGTAAGAAGAGATGAC 60.095 37.037 0.00 0.00 37.57 3.06
315 316 6.942005 TGCCATTTTTCAGTAAGAAGAGATGA 59.058 34.615 0.00 0.00 37.57 2.92
316 317 7.149569 TGCCATTTTTCAGTAAGAAGAGATG 57.850 36.000 0.00 0.00 37.57 2.90
317 318 7.833183 AGATGCCATTTTTCAGTAAGAAGAGAT 59.167 33.333 0.00 0.00 37.57 2.75
318 319 7.170965 AGATGCCATTTTTCAGTAAGAAGAGA 58.829 34.615 0.00 0.00 37.57 3.10
319 320 7.388460 AGATGCCATTTTTCAGTAAGAAGAG 57.612 36.000 0.00 0.00 37.57 2.85
320 321 6.375455 GGAGATGCCATTTTTCAGTAAGAAGA 59.625 38.462 0.00 0.00 35.40 2.87
321 322 6.376581 AGGAGATGCCATTTTTCAGTAAGAAG 59.623 38.462 0.00 0.00 40.02 2.85
322 323 6.248433 AGGAGATGCCATTTTTCAGTAAGAA 58.752 36.000 0.00 0.00 40.02 2.52
323 324 5.819991 AGGAGATGCCATTTTTCAGTAAGA 58.180 37.500 0.00 0.00 40.02 2.10
324 325 7.630242 TTAGGAGATGCCATTTTTCAGTAAG 57.370 36.000 0.00 0.00 40.02 2.34
325 326 9.693739 TTATTAGGAGATGCCATTTTTCAGTAA 57.306 29.630 0.00 0.00 40.02 2.24
326 327 9.693739 TTTATTAGGAGATGCCATTTTTCAGTA 57.306 29.630 0.00 0.00 40.02 2.74
327 328 8.593945 TTTATTAGGAGATGCCATTTTTCAGT 57.406 30.769 0.00 0.00 40.02 3.41
328 329 9.874205 TTTTTATTAGGAGATGCCATTTTTCAG 57.126 29.630 0.00 0.00 40.02 3.02
332 333 9.822185 GACATTTTTATTAGGAGATGCCATTTT 57.178 29.630 0.00 0.00 40.02 1.82
333 334 9.205513 AGACATTTTTATTAGGAGATGCCATTT 57.794 29.630 0.00 0.00 40.02 2.32
334 335 8.773033 AGACATTTTTATTAGGAGATGCCATT 57.227 30.769 0.00 0.00 40.02 3.16
335 336 7.449704 GGAGACATTTTTATTAGGAGATGCCAT 59.550 37.037 0.00 0.00 40.02 4.40
336 337 6.772716 GGAGACATTTTTATTAGGAGATGCCA 59.227 38.462 0.00 0.00 40.02 4.92
337 338 6.207614 GGGAGACATTTTTATTAGGAGATGCC 59.792 42.308 0.00 0.00 0.00 4.40
338 339 7.001073 AGGGAGACATTTTTATTAGGAGATGC 58.999 38.462 0.00 0.00 0.00 3.91
339 340 8.986929 AAGGGAGACATTTTTATTAGGAGATG 57.013 34.615 0.00 0.00 0.00 2.90
398 399 9.374838 GGCATTTTTGAATTAAGAGATCACATT 57.625 29.630 0.00 0.00 0.00 2.71
399 400 8.533657 TGGCATTTTTGAATTAAGAGATCACAT 58.466 29.630 0.00 0.00 0.00 3.21
400 401 7.894708 TGGCATTTTTGAATTAAGAGATCACA 58.105 30.769 0.00 0.00 0.00 3.58
401 402 8.814235 CATGGCATTTTTGAATTAAGAGATCAC 58.186 33.333 0.00 0.00 0.00 3.06
402 403 7.493320 GCATGGCATTTTTGAATTAAGAGATCA 59.507 33.333 0.00 0.00 0.00 2.92
403 404 7.493320 TGCATGGCATTTTTGAATTAAGAGATC 59.507 33.333 0.00 0.00 31.71 2.75
404 405 7.279313 GTGCATGGCATTTTTGAATTAAGAGAT 59.721 33.333 0.00 0.00 41.91 2.75
405 406 6.591062 GTGCATGGCATTTTTGAATTAAGAGA 59.409 34.615 0.00 0.00 41.91 3.10
406 407 6.369340 TGTGCATGGCATTTTTGAATTAAGAG 59.631 34.615 0.00 0.00 41.91 2.85
407 408 6.228995 TGTGCATGGCATTTTTGAATTAAGA 58.771 32.000 0.00 0.00 41.91 2.10
408 409 6.483385 TGTGCATGGCATTTTTGAATTAAG 57.517 33.333 0.00 0.00 41.91 1.85
409 410 6.872628 TTGTGCATGGCATTTTTGAATTAA 57.127 29.167 0.00 0.00 41.91 1.40
410 411 6.872628 TTTGTGCATGGCATTTTTGAATTA 57.127 29.167 0.00 0.00 41.91 1.40
411 412 5.769484 TTTGTGCATGGCATTTTTGAATT 57.231 30.435 0.00 0.00 41.91 2.17
412 413 5.769484 TTTTGTGCATGGCATTTTTGAAT 57.231 30.435 0.00 0.00 41.91 2.57
413 414 5.106038 TGTTTTTGTGCATGGCATTTTTGAA 60.106 32.000 0.00 0.00 41.91 2.69
414 415 4.397103 TGTTTTTGTGCATGGCATTTTTGA 59.603 33.333 0.00 0.00 41.91 2.69
415 416 4.669318 TGTTTTTGTGCATGGCATTTTTG 58.331 34.783 0.00 0.00 41.91 2.44
416 417 4.978083 TGTTTTTGTGCATGGCATTTTT 57.022 31.818 0.00 0.00 41.91 1.94
417 418 4.734108 GCTTGTTTTTGTGCATGGCATTTT 60.734 37.500 0.00 0.00 41.91 1.82
418 419 3.243134 GCTTGTTTTTGTGCATGGCATTT 60.243 39.130 0.00 0.00 41.91 2.32
419 420 2.291190 GCTTGTTTTTGTGCATGGCATT 59.709 40.909 0.00 0.00 41.91 3.56
420 421 1.874872 GCTTGTTTTTGTGCATGGCAT 59.125 42.857 0.00 0.00 41.91 4.40
421 422 1.134461 AGCTTGTTTTTGTGCATGGCA 60.134 42.857 0.00 0.00 35.60 4.92
422 423 1.585297 AGCTTGTTTTTGTGCATGGC 58.415 45.000 0.00 0.00 0.00 4.40
423 424 3.001533 GTCAAGCTTGTTTTTGTGCATGG 59.998 43.478 25.19 0.00 0.00 3.66
424 425 3.866910 AGTCAAGCTTGTTTTTGTGCATG 59.133 39.130 25.19 0.00 0.00 4.06
425 426 4.114794 GAGTCAAGCTTGTTTTTGTGCAT 58.885 39.130 25.19 1.62 0.00 3.96
426 427 3.056962 TGAGTCAAGCTTGTTTTTGTGCA 60.057 39.130 25.19 10.79 0.00 4.57
427 428 3.510719 TGAGTCAAGCTTGTTTTTGTGC 58.489 40.909 25.19 8.60 0.00 4.57
428 429 6.464895 TTTTGAGTCAAGCTTGTTTTTGTG 57.535 33.333 25.19 0.00 0.00 3.33
459 460 7.065204 ACGTCACAAGGCAATTTAAACATTTTT 59.935 29.630 0.00 0.00 0.00 1.94
460 461 6.536941 ACGTCACAAGGCAATTTAAACATTTT 59.463 30.769 0.00 0.00 0.00 1.82
461 462 6.045955 ACGTCACAAGGCAATTTAAACATTT 58.954 32.000 0.00 0.00 0.00 2.32
462 463 5.596845 ACGTCACAAGGCAATTTAAACATT 58.403 33.333 0.00 0.00 0.00 2.71
463 464 5.195001 ACGTCACAAGGCAATTTAAACAT 57.805 34.783 0.00 0.00 0.00 2.71
464 465 4.640789 ACGTCACAAGGCAATTTAAACA 57.359 36.364 0.00 0.00 0.00 2.83
465 466 4.801516 ACAACGTCACAAGGCAATTTAAAC 59.198 37.500 0.00 0.00 0.00 2.01
466 467 5.000012 ACAACGTCACAAGGCAATTTAAA 58.000 34.783 0.00 0.00 0.00 1.52
467 468 4.640789 ACAACGTCACAAGGCAATTTAA 57.359 36.364 0.00 0.00 0.00 1.52
468 469 4.336993 AGAACAACGTCACAAGGCAATTTA 59.663 37.500 0.00 0.00 0.00 1.40
469 470 3.130340 AGAACAACGTCACAAGGCAATTT 59.870 39.130 0.00 0.00 0.00 1.82
470 471 2.687935 AGAACAACGTCACAAGGCAATT 59.312 40.909 0.00 0.00 0.00 2.32
471 472 2.297701 AGAACAACGTCACAAGGCAAT 58.702 42.857 0.00 0.00 0.00 3.56
472 473 1.745232 AGAACAACGTCACAAGGCAA 58.255 45.000 0.00 0.00 0.00 4.52
473 474 2.605837 TAGAACAACGTCACAAGGCA 57.394 45.000 0.00 0.00 0.00 4.75
474 475 3.955771 TTTAGAACAACGTCACAAGGC 57.044 42.857 0.00 0.00 0.00 4.35
475 476 7.411274 TGTAATTTTAGAACAACGTCACAAGG 58.589 34.615 0.00 0.00 0.00 3.61
476 477 8.829514 TTGTAATTTTAGAACAACGTCACAAG 57.170 30.769 0.00 0.00 0.00 3.16
477 478 9.622004 TTTTGTAATTTTAGAACAACGTCACAA 57.378 25.926 0.00 0.00 33.10 3.33
478 479 9.063739 GTTTTGTAATTTTAGAACAACGTCACA 57.936 29.630 0.00 0.00 33.10 3.58
479 480 9.281075 AGTTTTGTAATTTTAGAACAACGTCAC 57.719 29.630 0.00 0.00 33.10 3.67
480 481 9.843334 AAGTTTTGTAATTTTAGAACAACGTCA 57.157 25.926 0.00 0.00 33.10 4.35
482 483 9.292846 GGAAGTTTTGTAATTTTAGAACAACGT 57.707 29.630 0.00 0.00 33.10 3.99
483 484 9.291664 TGGAAGTTTTGTAATTTTAGAACAACG 57.708 29.630 0.00 0.00 33.10 4.10
496 497 9.103861 GGAAAAATCAACATGGAAGTTTTGTAA 57.896 29.630 0.00 0.00 0.00 2.41
497 498 8.482128 AGGAAAAATCAACATGGAAGTTTTGTA 58.518 29.630 0.00 0.00 0.00 2.41
498 499 7.337938 AGGAAAAATCAACATGGAAGTTTTGT 58.662 30.769 0.00 0.00 0.00 2.83
499 500 7.790823 AGGAAAAATCAACATGGAAGTTTTG 57.209 32.000 0.00 0.00 0.00 2.44
500 501 8.923270 TCTAGGAAAAATCAACATGGAAGTTTT 58.077 29.630 0.00 0.00 0.00 2.43
501 502 8.477419 TCTAGGAAAAATCAACATGGAAGTTT 57.523 30.769 0.00 0.00 0.00 2.66
502 503 7.944554 TCTCTAGGAAAAATCAACATGGAAGTT 59.055 33.333 0.00 0.00 0.00 2.66
503 504 7.461749 TCTCTAGGAAAAATCAACATGGAAGT 58.538 34.615 0.00 0.00 0.00 3.01
504 505 7.928307 TCTCTAGGAAAAATCAACATGGAAG 57.072 36.000 0.00 0.00 0.00 3.46
505 506 8.704849 TTTCTCTAGGAAAAATCAACATGGAA 57.295 30.769 0.00 0.00 40.51 3.53
506 507 8.884124 ATTTCTCTAGGAAAAATCAACATGGA 57.116 30.769 9.51 0.00 45.56 3.41
507 508 9.362539 CAATTTCTCTAGGAAAAATCAACATGG 57.637 33.333 9.51 0.00 45.56 3.66
508 509 8.866956 GCAATTTCTCTAGGAAAAATCAACATG 58.133 33.333 9.51 0.00 45.56 3.21
509 510 8.810041 AGCAATTTCTCTAGGAAAAATCAACAT 58.190 29.630 9.51 0.00 45.56 2.71
510 511 8.181904 AGCAATTTCTCTAGGAAAAATCAACA 57.818 30.769 9.51 0.00 45.56 3.33
513 514 9.911788 AGATAGCAATTTCTCTAGGAAAAATCA 57.088 29.630 9.51 0.00 45.56 2.57
515 516 9.129532 CCAGATAGCAATTTCTCTAGGAAAAAT 57.870 33.333 9.51 2.53 45.56 1.82
516 517 8.109634 ACCAGATAGCAATTTCTCTAGGAAAAA 58.890 33.333 9.51 0.53 45.56 1.94
517 518 7.633789 ACCAGATAGCAATTTCTCTAGGAAAA 58.366 34.615 9.51 2.64 45.56 2.29
518 519 7.200434 ACCAGATAGCAATTTCTCTAGGAAA 57.800 36.000 8.30 8.30 46.33 3.13
519 520 6.814954 ACCAGATAGCAATTTCTCTAGGAA 57.185 37.500 0.00 0.00 0.00 3.36
520 521 7.914427 TTACCAGATAGCAATTTCTCTAGGA 57.086 36.000 0.00 0.00 0.00 2.94
521 522 8.964476 TTTTACCAGATAGCAATTTCTCTAGG 57.036 34.615 0.00 0.00 0.00 3.02
524 525 9.466497 TTCATTTTACCAGATAGCAATTTCTCT 57.534 29.630 0.00 0.00 0.00 3.10
525 526 9.727627 CTTCATTTTACCAGATAGCAATTTCTC 57.272 33.333 0.00 0.00 0.00 2.87
526 527 8.689972 CCTTCATTTTACCAGATAGCAATTTCT 58.310 33.333 0.00 0.00 0.00 2.52
527 528 7.922811 CCCTTCATTTTACCAGATAGCAATTTC 59.077 37.037 0.00 0.00 0.00 2.17
528 529 7.619302 TCCCTTCATTTTACCAGATAGCAATTT 59.381 33.333 0.00 0.00 0.00 1.82
529 530 7.125391 TCCCTTCATTTTACCAGATAGCAATT 58.875 34.615 0.00 0.00 0.00 2.32
530 531 6.672593 TCCCTTCATTTTACCAGATAGCAAT 58.327 36.000 0.00 0.00 0.00 3.56
531 532 6.073447 TCCCTTCATTTTACCAGATAGCAA 57.927 37.500 0.00 0.00 0.00 3.91
532 533 5.708736 TCCCTTCATTTTACCAGATAGCA 57.291 39.130 0.00 0.00 0.00 3.49
533 534 7.404671 TTTTCCCTTCATTTTACCAGATAGC 57.595 36.000 0.00 0.00 0.00 2.97
556 557 5.932883 GGTTTGACTCTCGGTCTATCTTTTT 59.067 40.000 0.00 0.00 44.74 1.94
557 558 5.480205 GGTTTGACTCTCGGTCTATCTTTT 58.520 41.667 0.00 0.00 44.74 2.27
558 559 4.081586 GGGTTTGACTCTCGGTCTATCTTT 60.082 45.833 0.00 0.00 44.74 2.52
559 560 3.447944 GGGTTTGACTCTCGGTCTATCTT 59.552 47.826 0.00 0.00 44.74 2.40
560 561 3.025262 GGGTTTGACTCTCGGTCTATCT 58.975 50.000 0.00 0.00 44.74 1.98
561 562 2.758979 TGGGTTTGACTCTCGGTCTATC 59.241 50.000 0.00 0.00 44.74 2.08
562 563 2.761208 CTGGGTTTGACTCTCGGTCTAT 59.239 50.000 0.00 0.00 44.74 1.98
563 564 2.168496 CTGGGTTTGACTCTCGGTCTA 58.832 52.381 0.00 0.00 44.74 2.59
564 565 0.969894 CTGGGTTTGACTCTCGGTCT 59.030 55.000 0.00 0.00 44.74 3.85
565 566 0.037232 CCTGGGTTTGACTCTCGGTC 60.037 60.000 0.00 0.00 44.70 4.79
566 567 0.763223 ACCTGGGTTTGACTCTCGGT 60.763 55.000 0.00 0.00 0.00 4.69
567 568 0.320771 CACCTGGGTTTGACTCTCGG 60.321 60.000 0.00 0.00 0.00 4.63
568 569 0.393077 ACACCTGGGTTTGACTCTCG 59.607 55.000 0.00 0.00 0.00 4.04
569 570 2.104963 AGAACACCTGGGTTTGACTCTC 59.895 50.000 0.00 0.00 0.00 3.20
570 571 2.127708 AGAACACCTGGGTTTGACTCT 58.872 47.619 0.00 0.00 0.00 3.24
571 572 2.640316 AGAACACCTGGGTTTGACTC 57.360 50.000 0.00 0.00 0.00 3.36
572 573 3.314693 TCTAGAACACCTGGGTTTGACT 58.685 45.455 0.00 0.00 0.00 3.41
573 574 3.764237 TCTAGAACACCTGGGTTTGAC 57.236 47.619 0.00 0.00 0.00 3.18
574 575 5.338632 TCTATCTAGAACACCTGGGTTTGA 58.661 41.667 0.00 1.37 0.00 2.69
575 576 5.187967 ACTCTATCTAGAACACCTGGGTTTG 59.812 44.000 0.00 0.00 0.00 2.93
576 577 5.187967 CACTCTATCTAGAACACCTGGGTTT 59.812 44.000 0.00 0.00 0.00 3.27
577 578 4.712337 CACTCTATCTAGAACACCTGGGTT 59.288 45.833 0.00 0.00 0.00 4.11
578 579 4.264442 ACACTCTATCTAGAACACCTGGGT 60.264 45.833 0.00 0.00 0.00 4.51
579 580 4.282496 ACACTCTATCTAGAACACCTGGG 58.718 47.826 0.00 0.00 0.00 4.45
580 581 4.035792 CGACACTCTATCTAGAACACCTGG 59.964 50.000 0.00 0.00 0.00 4.45
581 582 4.496673 GCGACACTCTATCTAGAACACCTG 60.497 50.000 0.00 0.00 0.00 4.00
582 583 3.628487 GCGACACTCTATCTAGAACACCT 59.372 47.826 0.00 0.00 0.00 4.00
583 584 3.546417 CGCGACACTCTATCTAGAACACC 60.546 52.174 0.00 0.00 0.00 4.16
584 585 3.609475 CGCGACACTCTATCTAGAACAC 58.391 50.000 0.00 0.00 0.00 3.32
585 586 2.031807 GCGCGACACTCTATCTAGAACA 59.968 50.000 12.10 0.00 0.00 3.18
586 587 2.288458 AGCGCGACACTCTATCTAGAAC 59.712 50.000 12.10 0.00 0.00 3.01
587 588 2.288186 CAGCGCGACACTCTATCTAGAA 59.712 50.000 12.10 0.00 0.00 2.10
588 589 1.867865 CAGCGCGACACTCTATCTAGA 59.132 52.381 12.10 0.00 0.00 2.43
589 590 1.661743 GCAGCGCGACACTCTATCTAG 60.662 57.143 12.10 0.00 0.00 2.43
590 591 0.308068 GCAGCGCGACACTCTATCTA 59.692 55.000 12.10 0.00 0.00 1.98
591 592 1.064946 GCAGCGCGACACTCTATCT 59.935 57.895 12.10 0.00 0.00 1.98
592 593 0.932585 GAGCAGCGCGACACTCTATC 60.933 60.000 12.10 0.00 0.00 2.08
593 594 1.064946 GAGCAGCGCGACACTCTAT 59.935 57.895 12.10 0.00 0.00 1.98
594 595 2.485582 GAGCAGCGCGACACTCTA 59.514 61.111 12.10 0.00 0.00 2.43
595 596 4.767841 CGAGCAGCGCGACACTCT 62.768 66.667 14.00 0.00 0.00 3.24
613 614 1.086067 CACTACAGCCATCGCACTGG 61.086 60.000 0.00 0.00 38.25 4.00
614 615 0.390340 ACACTACAGCCATCGCACTG 60.390 55.000 0.00 0.00 39.86 3.66
615 616 0.321671 AACACTACAGCCATCGCACT 59.678 50.000 0.00 0.00 37.52 4.40
616 617 0.721718 GAACACTACAGCCATCGCAC 59.278 55.000 0.00 0.00 37.52 5.34
617 618 0.608130 AGAACACTACAGCCATCGCA 59.392 50.000 0.00 0.00 37.52 5.10
618 619 1.002366 CAGAACACTACAGCCATCGC 58.998 55.000 0.00 0.00 0.00 4.58
619 620 2.654749 TCAGAACACTACAGCCATCG 57.345 50.000 0.00 0.00 0.00 3.84
620 621 5.886960 ATTTTCAGAACACTACAGCCATC 57.113 39.130 0.00 0.00 0.00 3.51
621 622 6.476378 AGTATTTTCAGAACACTACAGCCAT 58.524 36.000 0.00 0.00 0.00 4.40
622 623 5.865085 AGTATTTTCAGAACACTACAGCCA 58.135 37.500 0.00 0.00 0.00 4.75
623 624 6.426937 TGAAGTATTTTCAGAACACTACAGCC 59.573 38.462 0.00 0.00 0.00 4.85
624 625 7.171678 AGTGAAGTATTTTCAGAACACTACAGC 59.828 37.037 0.00 0.00 35.95 4.40
625 626 8.491152 CAGTGAAGTATTTTCAGAACACTACAG 58.509 37.037 0.00 0.00 35.95 2.74
626 627 8.201464 TCAGTGAAGTATTTTCAGAACACTACA 58.799 33.333 0.00 0.00 35.95 2.74
627 628 8.488764 GTCAGTGAAGTATTTTCAGAACACTAC 58.511 37.037 0.00 0.00 35.95 2.73
628 629 8.421784 AGTCAGTGAAGTATTTTCAGAACACTA 58.578 33.333 0.00 0.00 35.95 2.74
629 630 7.275920 AGTCAGTGAAGTATTTTCAGAACACT 58.724 34.615 0.00 0.00 37.75 3.55
630 631 7.484035 AGTCAGTGAAGTATTTTCAGAACAC 57.516 36.000 0.00 0.00 0.00 3.32
631 632 8.506168 AAAGTCAGTGAAGTATTTTCAGAACA 57.494 30.769 0.00 0.00 0.00 3.18
632 633 9.788960 AAAAAGTCAGTGAAGTATTTTCAGAAC 57.211 29.630 0.00 0.00 0.00 3.01
661 662 9.019764 CGGATTTTCAAAACAATTTCGCTATAT 57.980 29.630 0.00 0.00 0.00 0.86
662 663 8.237949 TCGGATTTTCAAAACAATTTCGCTATA 58.762 29.630 0.00 0.00 0.00 1.31
663 664 7.061789 GTCGGATTTTCAAAACAATTTCGCTAT 59.938 33.333 0.00 0.00 0.00 2.97
664 665 6.361214 GTCGGATTTTCAAAACAATTTCGCTA 59.639 34.615 0.00 0.00 0.00 4.26
665 666 5.174943 GTCGGATTTTCAAAACAATTTCGCT 59.825 36.000 0.00 0.00 0.00 4.93
666 667 5.362711 GTCGGATTTTCAAAACAATTTCGC 58.637 37.500 0.00 0.00 0.00 4.70
667 668 5.172411 ACGTCGGATTTTCAAAACAATTTCG 59.828 36.000 0.00 0.00 0.00 3.46
668 669 6.344032 CACGTCGGATTTTCAAAACAATTTC 58.656 36.000 0.00 0.00 0.00 2.17
669 670 5.233263 CCACGTCGGATTTTCAAAACAATTT 59.767 36.000 0.00 0.00 36.56 1.82
670 671 4.742659 CCACGTCGGATTTTCAAAACAATT 59.257 37.500 0.00 0.00 36.56 2.32
671 672 4.295051 CCACGTCGGATTTTCAAAACAAT 58.705 39.130 0.00 0.00 36.56 2.71
672 673 3.696898 CCACGTCGGATTTTCAAAACAA 58.303 40.909 0.00 0.00 36.56 2.83
673 674 2.541999 GCCACGTCGGATTTTCAAAACA 60.542 45.455 8.04 0.00 36.56 2.83
674 675 2.048498 GCCACGTCGGATTTTCAAAAC 58.952 47.619 8.04 0.00 36.56 2.43
675 676 1.950909 AGCCACGTCGGATTTTCAAAA 59.049 42.857 8.04 0.00 36.56 2.44
676 677 1.533731 GAGCCACGTCGGATTTTCAAA 59.466 47.619 8.04 0.00 36.56 2.69
677 678 1.153353 GAGCCACGTCGGATTTTCAA 58.847 50.000 8.04 0.00 36.56 2.69
678 679 1.011968 CGAGCCACGTCGGATTTTCA 61.012 55.000 8.04 0.00 36.26 2.69
679 680 1.708027 CGAGCCACGTCGGATTTTC 59.292 57.895 8.04 0.38 36.26 2.29
680 681 3.870606 CGAGCCACGTCGGATTTT 58.129 55.556 8.04 0.00 36.26 1.82
686 687 2.184830 TAGGATCCGAGCCACGTCG 61.185 63.158 5.98 0.00 40.78 5.12
687 688 1.359475 GTAGGATCCGAGCCACGTC 59.641 63.158 5.98 0.00 40.78 4.34
688 689 2.478890 CGTAGGATCCGAGCCACGT 61.479 63.158 5.98 0.00 40.78 4.49
689 690 2.331805 CGTAGGATCCGAGCCACG 59.668 66.667 5.98 9.06 42.18 4.94
690 691 2.027751 GCGTAGGATCCGAGCCAC 59.972 66.667 15.30 0.66 0.00 5.01
691 692 3.224324 GGCGTAGGATCCGAGCCA 61.224 66.667 30.33 6.21 46.48 4.75
693 694 2.336809 CTGGCGTAGGATCCGAGC 59.663 66.667 17.16 17.16 0.00 5.03
702 703 0.739462 TTGCACGAATCCTGGCGTAG 60.739 55.000 0.00 0.00 38.92 3.51
703 704 0.320858 TTTGCACGAATCCTGGCGTA 60.321 50.000 0.00 0.00 38.92 4.42
704 705 1.599518 TTTGCACGAATCCTGGCGT 60.600 52.632 0.00 0.00 42.11 5.68
705 706 1.154225 GTTTGCACGAATCCTGGCG 60.154 57.895 0.00 0.00 0.00 5.69
706 707 4.868195 GTTTGCACGAATCCTGGC 57.132 55.556 0.00 0.00 0.00 4.85
716 717 1.368374 CCGTCGGTTTCGTTTGCAC 60.368 57.895 2.08 0.00 37.69 4.57
717 718 1.088340 TTCCGTCGGTTTCGTTTGCA 61.088 50.000 11.88 0.00 37.69 4.08
718 719 0.383860 CTTCCGTCGGTTTCGTTTGC 60.384 55.000 11.88 0.00 37.69 3.68
719 720 1.210870 TCTTCCGTCGGTTTCGTTTG 58.789 50.000 11.88 0.00 37.69 2.93
720 721 1.796459 CATCTTCCGTCGGTTTCGTTT 59.204 47.619 11.88 0.00 37.69 3.60
721 722 1.425412 CATCTTCCGTCGGTTTCGTT 58.575 50.000 11.88 0.00 37.69 3.85
722 723 0.389426 CCATCTTCCGTCGGTTTCGT 60.389 55.000 11.88 0.00 37.69 3.85
723 724 1.082117 CCCATCTTCCGTCGGTTTCG 61.082 60.000 11.88 0.00 37.82 3.46
724 725 0.743345 CCCCATCTTCCGTCGGTTTC 60.743 60.000 11.88 0.00 0.00 2.78
725 726 1.298667 CCCCATCTTCCGTCGGTTT 59.701 57.895 11.88 0.00 0.00 3.27
726 727 2.987125 CCCCATCTTCCGTCGGTT 59.013 61.111 11.88 0.00 0.00 4.44
727 728 3.782443 GCCCCATCTTCCGTCGGT 61.782 66.667 11.88 0.00 0.00 4.69
728 729 4.891727 CGCCCCATCTTCCGTCGG 62.892 72.222 4.39 4.39 0.00 4.79
729 730 3.659089 AACGCCCCATCTTCCGTCG 62.659 63.158 0.00 0.00 32.89 5.12
730 731 1.814169 GAACGCCCCATCTTCCGTC 60.814 63.158 0.00 0.00 32.89 4.79
731 732 2.267961 GAACGCCCCATCTTCCGT 59.732 61.111 0.00 0.00 35.14 4.69
732 733 2.890474 CGAACGCCCCATCTTCCG 60.890 66.667 0.00 0.00 0.00 4.30
733 734 3.202706 GCGAACGCCCCATCTTCC 61.203 66.667 8.03 0.00 34.56 3.46
734 735 2.125106 AGCGAACGCCCCATCTTC 60.125 61.111 15.44 0.00 43.17 2.87
735 736 2.436646 CAGCGAACGCCCCATCTT 60.437 61.111 15.44 0.00 43.17 2.40
736 737 4.473520 CCAGCGAACGCCCCATCT 62.474 66.667 15.44 0.00 43.17 2.90
737 738 3.969250 TTCCAGCGAACGCCCCATC 62.969 63.158 15.44 0.00 43.17 3.51
738 739 4.028490 TTCCAGCGAACGCCCCAT 62.028 61.111 15.44 0.00 43.17 4.00
745 746 1.749258 GGGGATGGTTCCAGCGAAC 60.749 63.158 0.98 0.00 46.52 3.95
746 747 2.674754 GGGGATGGTTCCAGCGAA 59.325 61.111 0.98 0.00 44.60 4.70
747 748 3.407967 GGGGGATGGTTCCAGCGA 61.408 66.667 0.98 0.00 44.60 4.93
748 749 3.411517 AGGGGGATGGTTCCAGCG 61.412 66.667 0.98 0.00 44.60 5.18
749 750 2.276309 CTCAGGGGGATGGTTCCAGC 62.276 65.000 0.00 0.00 44.60 4.85
750 751 1.639635 CCTCAGGGGGATGGTTCCAG 61.640 65.000 0.00 0.00 44.60 3.86
751 752 1.619363 CCTCAGGGGGATGGTTCCA 60.619 63.158 0.00 0.00 44.60 3.53
752 753 1.214992 AACCTCAGGGGGATGGTTCC 61.215 60.000 0.00 0.00 38.26 3.62
753 754 2.398919 AACCTCAGGGGGATGGTTC 58.601 57.895 0.00 0.00 38.26 3.62
754 755 1.562672 CGAACCTCAGGGGGATGGTT 61.563 60.000 0.00 0.00 44.43 3.67
755 756 1.995626 CGAACCTCAGGGGGATGGT 60.996 63.158 0.00 0.00 40.03 3.55
756 757 2.911143 CGAACCTCAGGGGGATGG 59.089 66.667 0.00 0.00 40.03 3.51
757 758 2.190578 GCGAACCTCAGGGGGATG 59.809 66.667 0.00 0.00 40.03 3.51
758 759 3.090532 GGCGAACCTCAGGGGGAT 61.091 66.667 0.00 0.00 40.03 3.85
759 760 4.649705 TGGCGAACCTCAGGGGGA 62.650 66.667 0.00 0.00 40.03 4.81
760 761 4.101448 CTGGCGAACCTCAGGGGG 62.101 72.222 0.00 0.00 40.03 5.40
761 762 1.048724 TATCTGGCGAACCTCAGGGG 61.049 60.000 0.00 0.00 41.89 4.79
762 763 1.001406 GATATCTGGCGAACCTCAGGG 59.999 57.143 0.00 0.00 36.63 4.45
763 764 1.967066 AGATATCTGGCGAACCTCAGG 59.033 52.381 3.89 0.00 36.63 3.86
764 765 2.865670 GCAGATATCTGGCGAACCTCAG 60.866 54.545 29.43 4.64 43.94 3.35
765 766 1.069204 GCAGATATCTGGCGAACCTCA 59.931 52.381 29.43 0.00 43.94 3.86
766 767 1.069204 TGCAGATATCTGGCGAACCTC 59.931 52.381 29.43 13.60 43.94 3.85
767 768 1.123077 TGCAGATATCTGGCGAACCT 58.877 50.000 29.43 0.00 43.94 3.50
768 769 1.953559 TTGCAGATATCTGGCGAACC 58.046 50.000 29.43 14.86 43.94 3.62
769 770 4.035558 TGATTTTGCAGATATCTGGCGAAC 59.964 41.667 29.43 15.49 43.94 3.95
770 771 4.198530 TGATTTTGCAGATATCTGGCGAA 58.801 39.130 29.43 23.12 43.94 4.70
771 772 3.807553 TGATTTTGCAGATATCTGGCGA 58.192 40.909 29.43 19.56 43.94 5.54
772 773 4.556942 TTGATTTTGCAGATATCTGGCG 57.443 40.909 29.43 9.24 43.94 5.69
773 774 5.747197 CAGTTTGATTTTGCAGATATCTGGC 59.253 40.000 29.43 22.10 43.94 4.85
774 775 5.747197 GCAGTTTGATTTTGCAGATATCTGG 59.253 40.000 29.43 14.42 43.94 3.86
775 776 6.561614 AGCAGTTTGATTTTGCAGATATCTG 58.438 36.000 25.64 25.64 46.40 2.90
776 777 6.770746 AGCAGTTTGATTTTGCAGATATCT 57.229 33.333 0.00 0.00 40.22 1.98
777 778 9.525409 AAATAGCAGTTTGATTTTGCAGATATC 57.475 29.630 0.00 0.00 40.22 1.63
778 779 9.309516 CAAATAGCAGTTTGATTTTGCAGATAT 57.690 29.630 7.78 0.00 40.64 1.63
797 798 6.928492 TGATTTCCTTCCAACAAACAAATAGC 59.072 34.615 0.00 0.00 0.00 2.97
815 817 3.828875 TTTGGGTTGGTTGTGATTTCC 57.171 42.857 0.00 0.00 0.00 3.13
841 843 9.653287 TCACGTTATATCCCATATTTTCAGATC 57.347 33.333 0.00 0.00 0.00 2.75
869 872 1.388547 AAGCGTGAAAACTGCTTGGA 58.611 45.000 0.00 0.00 46.46 3.53
916 923 2.844839 ATAGGCGGAGTCTGGGCC 60.845 66.667 11.04 11.04 46.61 5.80
917 924 1.834822 AGATAGGCGGAGTCTGGGC 60.835 63.158 0.05 0.62 46.61 5.36
918 925 0.757188 ACAGATAGGCGGAGTCTGGG 60.757 60.000 0.05 0.00 46.61 4.45
919 926 0.671251 GACAGATAGGCGGAGTCTGG 59.329 60.000 0.05 0.00 46.61 3.86
920 927 0.671251 GGACAGATAGGCGGAGTCTG 59.329 60.000 0.00 0.00 46.61 3.51
924 937 2.103094 TCAAATGGACAGATAGGCGGAG 59.897 50.000 0.00 0.00 0.00 4.63
940 953 5.890419 GTGGAGAGAGAAAATGGGATCAAAT 59.110 40.000 0.00 0.00 0.00 2.32
942 955 4.324563 GGTGGAGAGAGAAAATGGGATCAA 60.325 45.833 0.00 0.00 0.00 2.57
943 956 3.200825 GGTGGAGAGAGAAAATGGGATCA 59.799 47.826 0.00 0.00 0.00 2.92
1005 1042 0.912486 TCTTGGGCTTCTTCCTAGGC 59.088 55.000 2.96 0.00 37.45 3.93
1179 1255 1.610038 TGCTTCTTGTCGTCGAACCTA 59.390 47.619 0.00 0.00 0.00 3.08
1180 1256 0.387929 TGCTTCTTGTCGTCGAACCT 59.612 50.000 0.00 0.00 0.00 3.50
1183 1259 0.387929 AGGTGCTTCTTGTCGTCGAA 59.612 50.000 0.00 0.00 0.00 3.71
1201 1277 2.738213 AAGTTGCGGAGGTGCTGGAG 62.738 60.000 0.00 0.00 35.36 3.86
1375 1457 3.541713 GTAGAGGCGCAGAGGGGG 61.542 72.222 10.83 0.00 0.00 5.40
1449 1539 5.313712 TCAATGAAACTCTTTGGTAGGTCC 58.686 41.667 3.34 0.00 0.00 4.46
1464 1554 2.671914 GCAGCCAGCGAAATCAATGAAA 60.672 45.455 0.00 0.00 0.00 2.69
1467 1557 2.953669 GCAGCCAGCGAAATCAATG 58.046 52.632 0.00 0.00 0.00 2.82
1497 1587 3.743899 GCAGAGATTCATCTTCAGACCCC 60.744 52.174 0.00 0.00 37.25 4.95
1549 1639 1.493861 TGCTCAGATTCCTCAGGGAG 58.506 55.000 0.00 0.00 43.29 4.30
1559 1649 0.463295 CAGCCGGTGATGCTCAGATT 60.463 55.000 1.90 0.00 36.81 2.40
1630 1720 1.404315 CCGACTAGTTTCAGGGTCAGC 60.404 57.143 0.00 0.00 0.00 4.26
1659 1749 0.243636 AAGGCATGGCGTTTTAGTGC 59.756 50.000 14.30 0.00 32.59 4.40
1730 1821 6.035220 GTCGTCGTAATTCAAACATACATCCA 59.965 38.462 0.00 0.00 0.00 3.41
1831 1925 1.149174 CACCACCCAGAAGCACAGT 59.851 57.895 0.00 0.00 0.00 3.55
1886 1980 7.148205 TGCCGAATTAAAACCATACCTTTCTAC 60.148 37.037 0.00 0.00 0.00 2.59
1900 1994 7.502226 AGGTGATGATCTAATGCCGAATTAAAA 59.498 33.333 0.00 0.00 30.24 1.52
1924 2119 9.657419 AAAATAATCCTTACTGAAAATGCAAGG 57.343 29.630 0.00 0.00 37.66 3.61
1995 2195 3.416156 AGGGCAGTGTTTCAAATCTCTC 58.584 45.455 0.00 0.00 0.00 3.20
2080 2280 2.427232 TTCAGAATGCAAAGCAGTGC 57.573 45.000 7.13 7.13 43.65 4.40
2170 2370 7.557719 ACTGGTAATAATTTTACTCATGCAGCT 59.442 33.333 0.00 0.00 0.00 4.24
2185 2386 7.154191 ACCAAGATGGATGACTGGTAATAAT 57.846 36.000 2.85 0.00 40.96 1.28
2192 2393 6.153340 ACATTTAAACCAAGATGGATGACTGG 59.847 38.462 2.85 0.00 40.96 4.00
2231 2444 4.331968 TGCAGTTTATTAGTTGGTCCCTG 58.668 43.478 0.00 0.00 0.00 4.45
2318 2531 1.195448 GACCACATCGCACTTGACTTG 59.805 52.381 0.00 0.00 0.00 3.16
2387 2603 4.923871 AGTGTCATTAGTTTGCTCACGTAG 59.076 41.667 0.00 0.00 0.00 3.51
2566 2906 5.246656 TCAGATTTCCATGCCTCAAACAATT 59.753 36.000 0.00 0.00 0.00 2.32
2597 2937 5.163673 CCAACAAAATGGGTTGTTTTTCCTG 60.164 40.000 0.69 0.00 46.97 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.