Multiple sequence alignment - TraesCS6A01G069500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G069500 chr6A 100.000 1536 0 0 1 1536 37699589 37701124 0.000000e+00 2837
1 TraesCS6A01G069500 chr6A 100.000 1153 0 0 1872 3024 37701460 37702612 0.000000e+00 2130
2 TraesCS6A01G069500 chr6D 93.767 1123 38 16 427 1536 33141712 33142815 0.000000e+00 1657
3 TraesCS6A01G069500 chr6D 91.700 988 43 23 1872 2840 33142904 33143871 0.000000e+00 1334
4 TraesCS6A01G069500 chr6B 90.541 1036 63 15 460 1473 69707228 69708250 0.000000e+00 1338
5 TraesCS6A01G069500 chr6B 89.694 980 46 29 1872 2821 69708788 69709742 0.000000e+00 1199
6 TraesCS6A01G069500 chr1D 92.982 114 3 1 2875 2983 104293412 104293525 8.680000e-36 161
7 TraesCS6A01G069500 chr3B 80.905 199 38 0 3 201 59704973 59705171 1.120000e-34 158
8 TraesCS6A01G069500 chr3B 78.855 227 42 6 6 230 783277760 783277982 6.750000e-32 148
9 TraesCS6A01G069500 chr3B 85.496 131 19 0 71 201 817859744 817859874 1.460000e-28 137
10 TraesCS6A01G069500 chr3B 76.695 236 49 6 5 238 637661038 637661269 3.160000e-25 126
11 TraesCS6A01G069500 chr2D 78.723 235 48 2 5 238 647564330 647564563 4.040000e-34 156
12 TraesCS6A01G069500 chr7A 80.597 201 35 4 40 238 17596600 17596798 5.220000e-33 152
13 TraesCS6A01G069500 chr7A 80.303 198 37 2 5 201 23347430 23347234 6.750000e-32 148
14 TraesCS6A01G069500 chr7A 78.166 229 49 1 1 229 150184498 150184725 8.740000e-31 145
15 TraesCS6A01G069500 chr2B 79.500 200 34 7 5 201 18664988 18665183 5.260000e-28 135
16 TraesCS6A01G069500 chr2B 93.421 76 5 0 1030 1105 142446107 142446182 2.460000e-21 113


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G069500 chr6A 37699589 37702612 3023 False 2483.5 2837 100.0000 1 3024 2 chr6A.!!$F1 3023
1 TraesCS6A01G069500 chr6D 33141712 33143871 2159 False 1495.5 1657 92.7335 427 2840 2 chr6D.!!$F1 2413
2 TraesCS6A01G069500 chr6B 69707228 69709742 2514 False 1268.5 1338 90.1175 460 2821 2 chr6B.!!$F1 2361

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
354 355 0.034756 ACAGCAGCCGTGTGTTATCA 59.965 50.0 0.0 0.0 0.0 2.15 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2119 2530 0.392461 AAATAAGCGAGGCGGCTGAA 60.392 50.0 19.63 0.0 43.93 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.594123 TCCGAAGACACACAAACATAGA 57.406 40.909 0.00 0.00 0.00 1.98
23 24 4.304110 TCCGAAGACACACAAACATAGAC 58.696 43.478 0.00 0.00 0.00 2.59
24 25 4.055360 CCGAAGACACACAAACATAGACA 58.945 43.478 0.00 0.00 0.00 3.41
25 26 4.509970 CCGAAGACACACAAACATAGACAA 59.490 41.667 0.00 0.00 0.00 3.18
26 27 5.007234 CCGAAGACACACAAACATAGACAAA 59.993 40.000 0.00 0.00 0.00 2.83
27 28 6.293407 CCGAAGACACACAAACATAGACAAAT 60.293 38.462 0.00 0.00 0.00 2.32
28 29 6.574832 CGAAGACACACAAACATAGACAAATG 59.425 38.462 0.00 0.00 0.00 2.32
29 30 7.518211 CGAAGACACACAAACATAGACAAATGA 60.518 37.037 0.00 0.00 0.00 2.57
30 31 6.959361 AGACACACAAACATAGACAAATGAC 58.041 36.000 0.00 0.00 0.00 3.06
31 32 5.747565 ACACACAAACATAGACAAATGACG 58.252 37.500 0.00 0.00 0.00 4.35
32 33 5.525745 ACACACAAACATAGACAAATGACGA 59.474 36.000 0.00 0.00 0.00 4.20
33 34 5.845953 CACACAAACATAGACAAATGACGAC 59.154 40.000 0.00 0.00 0.00 4.34
34 35 5.049680 ACACAAACATAGACAAATGACGACC 60.050 40.000 0.00 0.00 0.00 4.79
35 36 5.049749 CACAAACATAGACAAATGACGACCA 60.050 40.000 0.00 0.00 0.00 4.02
36 37 5.529430 ACAAACATAGACAAATGACGACCAA 59.471 36.000 0.00 0.00 0.00 3.67
37 38 6.038825 ACAAACATAGACAAATGACGACCAAA 59.961 34.615 0.00 0.00 0.00 3.28
38 39 5.607119 ACATAGACAAATGACGACCAAAC 57.393 39.130 0.00 0.00 0.00 2.93
39 40 4.454504 ACATAGACAAATGACGACCAAACC 59.545 41.667 0.00 0.00 0.00 3.27
40 41 2.227194 AGACAAATGACGACCAAACCC 58.773 47.619 0.00 0.00 0.00 4.11
41 42 0.948678 ACAAATGACGACCAAACCCG 59.051 50.000 0.00 0.00 0.00 5.28
42 43 1.231221 CAAATGACGACCAAACCCGA 58.769 50.000 0.00 0.00 0.00 5.14
43 44 1.196808 CAAATGACGACCAAACCCGAG 59.803 52.381 0.00 0.00 0.00 4.63
44 45 0.953960 AATGACGACCAAACCCGAGC 60.954 55.000 0.00 0.00 0.00 5.03
45 46 2.029964 GACGACCAAACCCGAGCA 59.970 61.111 0.00 0.00 0.00 4.26
46 47 2.027625 GACGACCAAACCCGAGCAG 61.028 63.158 0.00 0.00 0.00 4.24
47 48 2.342279 CGACCAAACCCGAGCAGA 59.658 61.111 0.00 0.00 0.00 4.26
48 49 1.079127 CGACCAAACCCGAGCAGAT 60.079 57.895 0.00 0.00 0.00 2.90
49 50 1.084370 CGACCAAACCCGAGCAGATC 61.084 60.000 0.00 0.00 0.00 2.75
50 51 0.744771 GACCAAACCCGAGCAGATCC 60.745 60.000 0.00 0.00 0.00 3.36
51 52 1.299648 CCAAACCCGAGCAGATCCA 59.700 57.895 0.00 0.00 0.00 3.41
52 53 0.107017 CCAAACCCGAGCAGATCCAT 60.107 55.000 0.00 0.00 0.00 3.41
53 54 1.303309 CAAACCCGAGCAGATCCATC 58.697 55.000 0.00 0.00 0.00 3.51
54 55 0.179073 AAACCCGAGCAGATCCATCG 60.179 55.000 5.16 5.16 36.24 3.84
55 56 1.043116 AACCCGAGCAGATCCATCGA 61.043 55.000 12.02 0.00 38.72 3.59
56 57 1.043116 ACCCGAGCAGATCCATCGAA 61.043 55.000 12.02 0.00 38.72 3.71
57 58 0.319728 CCCGAGCAGATCCATCGAAT 59.680 55.000 12.02 0.00 38.72 3.34
58 59 1.546029 CCCGAGCAGATCCATCGAATA 59.454 52.381 12.02 0.00 38.72 1.75
59 60 2.600731 CCGAGCAGATCCATCGAATAC 58.399 52.381 12.02 0.00 38.72 1.89
60 61 2.029918 CCGAGCAGATCCATCGAATACA 60.030 50.000 12.02 0.00 38.72 2.29
61 62 3.367806 CCGAGCAGATCCATCGAATACAT 60.368 47.826 12.02 0.00 38.72 2.29
62 63 4.142381 CCGAGCAGATCCATCGAATACATA 60.142 45.833 12.02 0.00 38.72 2.29
63 64 5.451103 CCGAGCAGATCCATCGAATACATAT 60.451 44.000 12.02 0.00 38.72 1.78
64 65 6.038985 CGAGCAGATCCATCGAATACATATT 58.961 40.000 6.06 0.00 38.72 1.28
65 66 6.198029 CGAGCAGATCCATCGAATACATATTC 59.802 42.308 6.06 2.08 38.72 1.75
66 67 6.939622 AGCAGATCCATCGAATACATATTCA 58.060 36.000 11.26 0.97 41.59 2.57
67 68 7.563020 AGCAGATCCATCGAATACATATTCAT 58.437 34.615 11.26 2.89 41.59 2.57
68 69 8.045507 AGCAGATCCATCGAATACATATTCATT 58.954 33.333 11.26 0.00 41.59 2.57
69 70 8.121086 GCAGATCCATCGAATACATATTCATTG 58.879 37.037 11.26 7.70 41.59 2.82
70 71 8.610035 CAGATCCATCGAATACATATTCATTGG 58.390 37.037 16.62 16.62 41.59 3.16
71 72 8.542926 AGATCCATCGAATACATATTCATTGGA 58.457 33.333 22.43 22.43 46.26 3.53
72 73 8.728337 ATCCATCGAATACATATTCATTGGAG 57.272 34.615 23.44 6.96 45.88 3.86
73 74 7.906327 TCCATCGAATACATATTCATTGGAGA 58.094 34.615 19.23 7.37 42.39 3.71
74 75 7.819415 TCCATCGAATACATATTCATTGGAGAC 59.181 37.037 19.23 0.00 42.39 3.36
75 76 7.603784 CCATCGAATACATATTCATTGGAGACA 59.396 37.037 17.29 0.00 41.83 3.41
76 77 9.159364 CATCGAATACATATTCATTGGAGACAT 57.841 33.333 11.26 0.00 41.59 3.06
78 79 9.639601 TCGAATACATATTCATTGGAGACATAC 57.360 33.333 11.26 0.00 41.59 2.39
79 80 8.873830 CGAATACATATTCATTGGAGACATACC 58.126 37.037 11.26 0.00 41.59 2.73
80 81 9.950496 GAATACATATTCATTGGAGACATACCT 57.050 33.333 6.74 0.00 41.25 3.08
81 82 9.950496 AATACATATTCATTGGAGACATACCTC 57.050 33.333 0.00 0.00 42.32 3.85
89 90 2.246719 GAGACATACCTCCACATGCC 57.753 55.000 0.00 0.00 0.00 4.40
90 91 0.839946 AGACATACCTCCACATGCCC 59.160 55.000 0.00 0.00 0.00 5.36
91 92 0.546122 GACATACCTCCACATGCCCA 59.454 55.000 0.00 0.00 0.00 5.36
92 93 0.255890 ACATACCTCCACATGCCCAC 59.744 55.000 0.00 0.00 0.00 4.61
93 94 0.466189 CATACCTCCACATGCCCACC 60.466 60.000 0.00 0.00 0.00 4.61
94 95 0.918799 ATACCTCCACATGCCCACCA 60.919 55.000 0.00 0.00 0.00 4.17
95 96 1.136961 TACCTCCACATGCCCACCAA 61.137 55.000 0.00 0.00 0.00 3.67
96 97 1.000739 CCTCCACATGCCCACCAAT 59.999 57.895 0.00 0.00 0.00 3.16
97 98 1.324740 CCTCCACATGCCCACCAATG 61.325 60.000 0.00 0.00 0.00 2.82
98 99 0.323633 CTCCACATGCCCACCAATGA 60.324 55.000 0.00 0.00 0.00 2.57
99 100 0.335705 TCCACATGCCCACCAATGAT 59.664 50.000 0.00 0.00 0.00 2.45
100 101 0.462375 CCACATGCCCACCAATGATG 59.538 55.000 0.00 0.00 0.00 3.07
101 102 0.179094 CACATGCCCACCAATGATGC 60.179 55.000 0.00 0.00 0.00 3.91
102 103 0.324923 ACATGCCCACCAATGATGCT 60.325 50.000 0.00 0.00 0.00 3.79
103 104 1.063792 ACATGCCCACCAATGATGCTA 60.064 47.619 0.00 0.00 0.00 3.49
104 105 1.611977 CATGCCCACCAATGATGCTAG 59.388 52.381 0.00 0.00 0.00 3.42
105 106 0.918258 TGCCCACCAATGATGCTAGA 59.082 50.000 0.00 0.00 0.00 2.43
106 107 1.496001 TGCCCACCAATGATGCTAGAT 59.504 47.619 0.00 0.00 0.00 1.98
107 108 1.884579 GCCCACCAATGATGCTAGATG 59.115 52.381 0.00 0.00 0.00 2.90
108 109 1.884579 CCCACCAATGATGCTAGATGC 59.115 52.381 0.00 0.00 43.25 3.91
119 120 2.517650 GCTAGATGCACTGGTAGGAC 57.482 55.000 0.00 0.00 42.31 3.85
120 121 1.269309 GCTAGATGCACTGGTAGGACG 60.269 57.143 0.00 0.00 42.31 4.79
121 122 1.338337 CTAGATGCACTGGTAGGACGG 59.662 57.143 0.00 0.00 0.00 4.79
122 123 1.144057 GATGCACTGGTAGGACGGG 59.856 63.158 0.00 0.00 0.00 5.28
123 124 2.311688 GATGCACTGGTAGGACGGGG 62.312 65.000 0.00 0.00 0.00 5.73
124 125 3.782443 GCACTGGTAGGACGGGGG 61.782 72.222 0.00 0.00 0.00 5.40
125 126 3.782443 CACTGGTAGGACGGGGGC 61.782 72.222 0.00 0.00 0.00 5.80
126 127 4.007323 ACTGGTAGGACGGGGGCT 62.007 66.667 0.00 0.00 0.00 5.19
127 128 2.281091 CTGGTAGGACGGGGGCTA 59.719 66.667 0.00 0.00 0.00 3.93
128 129 1.833049 CTGGTAGGACGGGGGCTAG 60.833 68.421 0.00 0.00 0.00 3.42
129 130 2.523657 GGTAGGACGGGGGCTAGG 60.524 72.222 0.00 0.00 0.00 3.02
130 131 3.232483 GTAGGACGGGGGCTAGGC 61.232 72.222 8.00 8.00 0.00 3.93
131 132 3.757941 TAGGACGGGGGCTAGGCA 61.758 66.667 19.14 0.00 0.00 4.75
132 133 3.751049 TAGGACGGGGGCTAGGCAG 62.751 68.421 19.14 11.01 0.00 4.85
134 135 4.162690 GACGGGGGCTAGGCAGTG 62.163 72.222 19.14 8.86 0.00 3.66
135 136 4.715130 ACGGGGGCTAGGCAGTGA 62.715 66.667 19.14 0.00 0.00 3.41
136 137 3.854669 CGGGGGCTAGGCAGTGAG 61.855 72.222 19.14 0.52 0.00 3.51
137 138 2.365635 GGGGGCTAGGCAGTGAGA 60.366 66.667 19.14 0.00 0.00 3.27
138 139 1.995626 GGGGGCTAGGCAGTGAGAA 60.996 63.158 19.14 0.00 0.00 2.87
139 140 1.222113 GGGGCTAGGCAGTGAGAAC 59.778 63.158 19.14 0.00 0.00 3.01
140 141 1.153549 GGGCTAGGCAGTGAGAACG 60.154 63.158 19.14 0.00 0.00 3.95
141 142 1.592223 GGCTAGGCAGTGAGAACGT 59.408 57.895 12.16 0.00 0.00 3.99
142 143 0.037232 GGCTAGGCAGTGAGAACGTT 60.037 55.000 12.16 0.00 0.00 3.99
143 144 1.203994 GGCTAGGCAGTGAGAACGTTA 59.796 52.381 12.16 0.00 0.00 3.18
144 145 2.159085 GGCTAGGCAGTGAGAACGTTAT 60.159 50.000 12.16 0.00 0.00 1.89
145 146 3.522553 GCTAGGCAGTGAGAACGTTATT 58.477 45.455 0.00 0.00 0.00 1.40
146 147 3.552294 GCTAGGCAGTGAGAACGTTATTC 59.448 47.826 0.00 2.82 0.00 1.75
147 148 2.973945 AGGCAGTGAGAACGTTATTCC 58.026 47.619 0.00 0.00 0.00 3.01
148 149 2.301870 AGGCAGTGAGAACGTTATTCCA 59.698 45.455 0.00 0.00 0.00 3.53
149 150 3.055094 AGGCAGTGAGAACGTTATTCCAT 60.055 43.478 0.00 0.00 0.00 3.41
150 151 3.309954 GGCAGTGAGAACGTTATTCCATC 59.690 47.826 0.00 0.00 0.00 3.51
151 152 4.184629 GCAGTGAGAACGTTATTCCATCT 58.815 43.478 0.00 0.00 0.00 2.90
152 153 4.631813 GCAGTGAGAACGTTATTCCATCTT 59.368 41.667 0.00 0.00 0.00 2.40
153 154 5.810587 GCAGTGAGAACGTTATTCCATCTTA 59.189 40.000 0.00 0.00 0.00 2.10
154 155 6.312918 GCAGTGAGAACGTTATTCCATCTTAA 59.687 38.462 0.00 0.00 0.00 1.85
155 156 7.464710 GCAGTGAGAACGTTATTCCATCTTAAG 60.465 40.741 0.00 0.00 0.00 1.85
156 157 7.010552 CAGTGAGAACGTTATTCCATCTTAAGG 59.989 40.741 0.00 0.00 0.00 2.69
157 158 7.039882 GTGAGAACGTTATTCCATCTTAAGGA 58.960 38.462 0.00 0.00 0.00 3.36
164 165 2.981859 TCCATCTTAAGGAAGTCGCC 57.018 50.000 1.85 0.00 34.03 5.54
165 166 1.136305 TCCATCTTAAGGAAGTCGCCG 59.864 52.381 1.85 0.00 34.03 6.46
166 167 0.931005 CATCTTAAGGAAGTCGCCGC 59.069 55.000 1.85 0.00 34.03 6.53
167 168 0.179081 ATCTTAAGGAAGTCGCCGCC 60.179 55.000 1.85 0.00 34.03 6.13
168 169 1.079405 CTTAAGGAAGTCGCCGCCA 60.079 57.895 0.00 0.00 0.00 5.69
169 170 0.462047 CTTAAGGAAGTCGCCGCCAT 60.462 55.000 0.00 0.00 0.00 4.40
170 171 0.461339 TTAAGGAAGTCGCCGCCATC 60.461 55.000 0.00 0.00 0.00 3.51
171 172 1.327690 TAAGGAAGTCGCCGCCATCT 61.328 55.000 0.00 0.00 0.00 2.90
172 173 2.579684 AAGGAAGTCGCCGCCATCTC 62.580 60.000 0.00 0.00 0.00 2.75
173 174 2.956964 GAAGTCGCCGCCATCTCG 60.957 66.667 0.00 0.00 0.00 4.04
174 175 3.701604 GAAGTCGCCGCCATCTCGT 62.702 63.158 0.00 0.00 0.00 4.18
175 176 3.701604 AAGTCGCCGCCATCTCGTC 62.702 63.158 0.00 0.00 0.00 4.20
176 177 4.194720 GTCGCCGCCATCTCGTCT 62.195 66.667 0.00 0.00 0.00 4.18
177 178 3.449227 TCGCCGCCATCTCGTCTT 61.449 61.111 0.00 0.00 0.00 3.01
178 179 2.509336 CGCCGCCATCTCGTCTTT 60.509 61.111 0.00 0.00 0.00 2.52
179 180 2.517450 CGCCGCCATCTCGTCTTTC 61.517 63.158 0.00 0.00 0.00 2.62
180 181 1.153549 GCCGCCATCTCGTCTTTCT 60.154 57.895 0.00 0.00 0.00 2.52
181 182 1.424493 GCCGCCATCTCGTCTTTCTG 61.424 60.000 0.00 0.00 0.00 3.02
182 183 0.173481 CCGCCATCTCGTCTTTCTGA 59.827 55.000 0.00 0.00 0.00 3.27
183 184 1.404181 CCGCCATCTCGTCTTTCTGAA 60.404 52.381 0.00 0.00 0.00 3.02
184 185 2.544685 CGCCATCTCGTCTTTCTGAAT 58.455 47.619 0.00 0.00 0.00 2.57
185 186 3.490933 CCGCCATCTCGTCTTTCTGAATA 60.491 47.826 0.00 0.00 0.00 1.75
186 187 3.733224 CGCCATCTCGTCTTTCTGAATAG 59.267 47.826 0.00 0.00 0.00 1.73
187 188 4.054671 GCCATCTCGTCTTTCTGAATAGG 58.945 47.826 0.00 0.00 0.00 2.57
188 189 4.202161 GCCATCTCGTCTTTCTGAATAGGA 60.202 45.833 0.00 0.00 0.00 2.94
189 190 5.285651 CCATCTCGTCTTTCTGAATAGGAC 58.714 45.833 0.00 0.46 0.00 3.85
190 191 5.163509 CCATCTCGTCTTTCTGAATAGGACA 60.164 44.000 14.34 0.00 0.00 4.02
191 192 5.312120 TCTCGTCTTTCTGAATAGGACAC 57.688 43.478 14.34 2.24 0.00 3.67
192 193 4.765339 TCTCGTCTTTCTGAATAGGACACA 59.235 41.667 14.34 0.00 0.00 3.72
193 194 5.243060 TCTCGTCTTTCTGAATAGGACACAA 59.757 40.000 14.34 4.09 0.00 3.33
194 195 5.849510 TCGTCTTTCTGAATAGGACACAAA 58.150 37.500 14.34 0.00 0.00 2.83
195 196 5.694910 TCGTCTTTCTGAATAGGACACAAAC 59.305 40.000 14.34 0.00 0.00 2.93
196 197 5.107065 CGTCTTTCTGAATAGGACACAAACC 60.107 44.000 14.34 0.00 0.00 3.27
197 198 5.181433 GTCTTTCTGAATAGGACACAAACCC 59.819 44.000 11.21 0.00 0.00 4.11
198 199 4.993705 TTCTGAATAGGACACAAACCCT 57.006 40.909 0.00 0.00 36.60 4.34
199 200 6.271391 TCTTTCTGAATAGGACACAAACCCTA 59.729 38.462 0.00 0.00 39.18 3.53
200 201 6.442541 TTCTGAATAGGACACAAACCCTAA 57.557 37.500 0.00 0.00 38.42 2.69
201 202 6.636454 TCTGAATAGGACACAAACCCTAAT 57.364 37.500 0.00 0.00 38.42 1.73
202 203 7.743116 TCTGAATAGGACACAAACCCTAATA 57.257 36.000 0.00 0.00 38.42 0.98
203 204 8.331931 TCTGAATAGGACACAAACCCTAATAT 57.668 34.615 0.00 0.00 38.42 1.28
204 205 9.442062 TCTGAATAGGACACAAACCCTAATATA 57.558 33.333 0.00 0.00 38.42 0.86
206 207 9.841295 TGAATAGGACACAAACCCTAATATAAC 57.159 33.333 0.00 0.00 38.42 1.89
230 231 9.902196 AACTATAAAGAAACATGTAAAAACGGG 57.098 29.630 0.00 0.00 0.00 5.28
231 232 8.024865 ACTATAAAGAAACATGTAAAAACGGGC 58.975 33.333 0.00 0.00 0.00 6.13
232 233 3.653539 AGAAACATGTAAAAACGGGCC 57.346 42.857 0.00 0.00 0.00 5.80
233 234 2.959707 AGAAACATGTAAAAACGGGCCA 59.040 40.909 4.39 0.00 0.00 5.36
234 235 3.576550 AGAAACATGTAAAAACGGGCCAT 59.423 39.130 4.39 0.00 0.00 4.40
235 236 3.586100 AACATGTAAAAACGGGCCATC 57.414 42.857 4.39 0.00 0.00 3.51
236 237 1.822371 ACATGTAAAAACGGGCCATCC 59.178 47.619 4.39 0.00 0.00 3.51
248 249 4.569180 CCATCCCCGCGCCTTCAT 62.569 66.667 0.00 0.00 0.00 2.57
249 250 3.282157 CATCCCCGCGCCTTCATG 61.282 66.667 0.00 0.00 0.00 3.07
250 251 4.569180 ATCCCCGCGCCTTCATGG 62.569 66.667 0.00 0.00 39.35 3.66
254 255 4.473520 CCGCGCCTTCATGGTCCT 62.474 66.667 0.00 0.00 38.35 3.85
255 256 2.499205 CGCGCCTTCATGGTCCTA 59.501 61.111 0.00 0.00 38.35 2.94
256 257 1.153449 CGCGCCTTCATGGTCCTAA 60.153 57.895 0.00 0.00 38.35 2.69
257 258 1.154205 CGCGCCTTCATGGTCCTAAG 61.154 60.000 0.00 0.00 38.35 2.18
258 259 0.815615 GCGCCTTCATGGTCCTAAGG 60.816 60.000 0.00 11.75 42.27 2.69
260 261 3.808984 CCTTCATGGTCCTAAGGCC 57.191 57.895 0.00 0.00 33.84 5.19
261 262 0.918983 CCTTCATGGTCCTAAGGCCA 59.081 55.000 5.01 1.47 39.33 5.36
262 263 1.496429 CCTTCATGGTCCTAAGGCCAT 59.504 52.381 5.01 5.96 45.55 4.40
263 264 2.091665 CCTTCATGGTCCTAAGGCCATT 60.092 50.000 5.01 0.00 43.05 3.16
264 265 2.734755 TCATGGTCCTAAGGCCATTG 57.265 50.000 5.01 0.00 43.05 2.82
265 266 1.215173 TCATGGTCCTAAGGCCATTGG 59.785 52.381 5.01 3.09 43.05 3.16
266 267 1.215173 CATGGTCCTAAGGCCATTGGA 59.785 52.381 7.08 7.08 43.05 3.53
267 268 0.918983 TGGTCCTAAGGCCATTGGAG 59.081 55.000 11.58 0.00 0.00 3.86
268 269 1.213296 GGTCCTAAGGCCATTGGAGA 58.787 55.000 11.58 0.00 0.00 3.71
269 270 1.134068 GGTCCTAAGGCCATTGGAGAC 60.134 57.143 11.58 6.74 0.00 3.36
270 271 0.830648 TCCTAAGGCCATTGGAGACG 59.169 55.000 7.08 0.00 0.00 4.18
271 272 0.830648 CCTAAGGCCATTGGAGACGA 59.169 55.000 5.01 0.00 0.00 4.20
272 273 1.202580 CCTAAGGCCATTGGAGACGAG 60.203 57.143 5.01 0.00 0.00 4.18
273 274 0.830648 TAAGGCCATTGGAGACGAGG 59.169 55.000 5.01 0.00 0.00 4.63
274 275 2.514824 GGCCATTGGAGACGAGGC 60.515 66.667 6.95 0.00 44.48 4.70
275 276 2.892425 GCCATTGGAGACGAGGCG 60.892 66.667 6.95 0.00 35.42 5.52
276 277 2.892640 CCATTGGAGACGAGGCGA 59.107 61.111 0.00 0.00 0.00 5.54
277 278 1.218047 CCATTGGAGACGAGGCGAA 59.782 57.895 0.00 0.00 0.00 4.70
278 279 1.084370 CCATTGGAGACGAGGCGAAC 61.084 60.000 0.00 0.00 0.00 3.95
279 280 1.084370 CATTGGAGACGAGGCGAACC 61.084 60.000 0.00 0.00 0.00 3.62
280 281 2.558554 ATTGGAGACGAGGCGAACCG 62.559 60.000 0.00 0.00 42.76 4.44
281 282 4.493747 GGAGACGAGGCGAACCGG 62.494 72.222 0.00 0.00 42.76 5.28
303 304 3.899836 CGGCTACGCGATATAGAGG 57.100 57.895 15.93 0.00 0.00 3.69
304 305 1.366679 CGGCTACGCGATATAGAGGA 58.633 55.000 15.93 0.00 0.00 3.71
305 306 1.736126 CGGCTACGCGATATAGAGGAA 59.264 52.381 15.93 0.00 0.00 3.36
306 307 2.355132 CGGCTACGCGATATAGAGGAAT 59.645 50.000 15.93 0.00 0.00 3.01
307 308 3.546417 CGGCTACGCGATATAGAGGAATC 60.546 52.174 15.93 0.00 0.00 2.52
308 309 3.243134 GGCTACGCGATATAGAGGAATCC 60.243 52.174 15.93 0.00 0.00 3.01
309 310 3.628487 GCTACGCGATATAGAGGAATCCT 59.372 47.826 15.93 0.00 36.03 3.24
310 311 4.815308 GCTACGCGATATAGAGGAATCCTA 59.185 45.833 15.93 0.00 31.76 2.94
311 312 5.296283 GCTACGCGATATAGAGGAATCCTAA 59.704 44.000 15.93 0.00 31.76 2.69
312 313 6.016943 GCTACGCGATATAGAGGAATCCTAAT 60.017 42.308 15.93 1.57 31.76 1.73
313 314 6.380095 ACGCGATATAGAGGAATCCTAATC 57.620 41.667 15.93 2.80 31.76 1.75
314 315 6.123651 ACGCGATATAGAGGAATCCTAATCT 58.876 40.000 15.93 0.00 31.76 2.40
315 316 6.261381 ACGCGATATAGAGGAATCCTAATCTC 59.739 42.308 15.93 0.99 31.76 2.75
316 317 6.485313 CGCGATATAGAGGAATCCTAATCTCT 59.515 42.308 0.00 0.00 39.57 3.10
317 318 7.012894 CGCGATATAGAGGAATCCTAATCTCTT 59.987 40.741 0.00 0.00 37.68 2.85
318 319 8.691797 GCGATATAGAGGAATCCTAATCTCTTT 58.308 37.037 0.00 0.00 37.68 2.52
338 339 3.492102 TTTTTGGGAGTGAGGAGACAG 57.508 47.619 0.00 0.00 0.00 3.51
339 340 0.687354 TTTGGGAGTGAGGAGACAGC 59.313 55.000 0.00 0.00 0.00 4.40
340 341 0.471780 TTGGGAGTGAGGAGACAGCA 60.472 55.000 0.00 0.00 0.00 4.41
341 342 0.902048 TGGGAGTGAGGAGACAGCAG 60.902 60.000 0.00 0.00 0.00 4.24
342 343 1.217779 GGAGTGAGGAGACAGCAGC 59.782 63.158 0.00 0.00 0.00 5.25
343 344 1.217779 GAGTGAGGAGACAGCAGCC 59.782 63.158 0.00 0.00 0.00 4.85
344 345 2.125753 GTGAGGAGACAGCAGCCG 60.126 66.667 0.00 0.00 0.00 5.52
345 346 2.601666 TGAGGAGACAGCAGCCGT 60.602 61.111 0.00 0.00 0.00 5.68
346 347 2.125753 GAGGAGACAGCAGCCGTG 60.126 66.667 0.00 0.00 0.00 4.94
347 348 2.919856 AGGAGACAGCAGCCGTGT 60.920 61.111 0.00 0.00 0.00 4.49
348 349 2.740055 GGAGACAGCAGCCGTGTG 60.740 66.667 0.00 0.00 0.00 3.82
349 350 2.029666 GAGACAGCAGCCGTGTGT 59.970 61.111 0.00 0.00 0.00 3.72
350 351 1.595382 GAGACAGCAGCCGTGTGTT 60.595 57.895 0.00 0.00 0.00 3.32
351 352 0.319555 GAGACAGCAGCCGTGTGTTA 60.320 55.000 0.00 0.00 0.00 2.41
352 353 0.321671 AGACAGCAGCCGTGTGTTAT 59.678 50.000 0.00 0.00 0.00 1.89
353 354 0.721718 GACAGCAGCCGTGTGTTATC 59.278 55.000 0.00 0.00 0.00 1.75
354 355 0.034756 ACAGCAGCCGTGTGTTATCA 59.965 50.000 0.00 0.00 0.00 2.15
355 356 1.155889 CAGCAGCCGTGTGTTATCAA 58.844 50.000 0.00 0.00 0.00 2.57
356 357 1.739466 CAGCAGCCGTGTGTTATCAAT 59.261 47.619 0.00 0.00 0.00 2.57
357 358 2.009774 AGCAGCCGTGTGTTATCAATC 58.990 47.619 0.00 0.00 0.00 2.67
358 359 1.737236 GCAGCCGTGTGTTATCAATCA 59.263 47.619 0.00 0.00 0.00 2.57
359 360 2.355756 GCAGCCGTGTGTTATCAATCAT 59.644 45.455 0.00 0.00 0.00 2.45
360 361 3.181497 GCAGCCGTGTGTTATCAATCATT 60.181 43.478 0.00 0.00 0.00 2.57
361 362 4.345288 CAGCCGTGTGTTATCAATCATTG 58.655 43.478 0.00 0.00 0.00 2.82
362 363 4.009675 AGCCGTGTGTTATCAATCATTGT 58.990 39.130 0.00 0.00 0.00 2.71
363 364 4.458989 AGCCGTGTGTTATCAATCATTGTT 59.541 37.500 0.00 0.00 0.00 2.83
364 365 4.558470 GCCGTGTGTTATCAATCATTGTTG 59.442 41.667 0.00 0.00 0.00 3.33
365 366 4.558470 CCGTGTGTTATCAATCATTGTTGC 59.442 41.667 0.00 0.00 0.00 4.17
366 367 5.152804 CGTGTGTTATCAATCATTGTTGCA 58.847 37.500 0.00 0.00 0.00 4.08
367 368 5.628606 CGTGTGTTATCAATCATTGTTGCAA 59.371 36.000 0.00 0.00 0.00 4.08
368 369 6.308524 CGTGTGTTATCAATCATTGTTGCAAT 59.691 34.615 0.59 0.00 0.00 3.56
369 370 7.148771 CGTGTGTTATCAATCATTGTTGCAATT 60.149 33.333 0.59 0.00 0.00 2.32
370 371 8.497554 GTGTGTTATCAATCATTGTTGCAATTT 58.502 29.630 0.59 0.00 0.00 1.82
371 372 8.496751 TGTGTTATCAATCATTGTTGCAATTTG 58.503 29.630 0.59 0.93 0.00 2.32
372 373 7.479291 GTGTTATCAATCATTGTTGCAATTTGC 59.521 33.333 14.49 14.49 45.29 3.68
382 383 3.512978 GCAATTTGCAACGGACCAT 57.487 47.368 16.35 0.00 44.26 3.55
383 384 1.070038 GCAATTTGCAACGGACCATG 58.930 50.000 16.35 0.00 44.26 3.66
384 385 1.605202 GCAATTTGCAACGGACCATGT 60.605 47.619 16.35 0.00 44.26 3.21
385 386 2.753296 CAATTTGCAACGGACCATGTT 58.247 42.857 0.00 0.00 0.00 2.71
391 392 2.437200 CAACGGACCATGTTGCAATT 57.563 45.000 0.59 0.00 40.11 2.32
392 393 2.753296 CAACGGACCATGTTGCAATTT 58.247 42.857 0.59 0.00 40.11 1.82
393 394 3.129871 CAACGGACCATGTTGCAATTTT 58.870 40.909 0.59 0.00 40.11 1.82
394 395 2.753296 ACGGACCATGTTGCAATTTTG 58.247 42.857 0.59 0.64 0.00 2.44
395 396 2.067766 CGGACCATGTTGCAATTTTGG 58.932 47.619 18.41 18.41 0.00 3.28
396 397 2.288702 CGGACCATGTTGCAATTTTGGA 60.289 45.455 23.91 0.00 0.00 3.53
397 398 3.737850 GGACCATGTTGCAATTTTGGAA 58.262 40.909 23.91 0.00 36.11 3.53
398 399 4.133078 GGACCATGTTGCAATTTTGGAAA 58.867 39.130 23.91 0.00 40.21 3.13
399 400 4.213906 GGACCATGTTGCAATTTTGGAAAG 59.786 41.667 23.91 5.81 40.21 2.62
400 401 5.033589 ACCATGTTGCAATTTTGGAAAGA 57.966 34.783 23.91 0.00 40.21 2.52
401 402 5.058490 ACCATGTTGCAATTTTGGAAAGAG 58.942 37.500 23.91 5.01 40.21 2.85
402 403 5.163322 ACCATGTTGCAATTTTGGAAAGAGA 60.163 36.000 23.91 0.00 40.21 3.10
403 404 5.407387 CCATGTTGCAATTTTGGAAAGAGAG 59.593 40.000 16.18 0.00 40.21 3.20
404 405 5.850557 TGTTGCAATTTTGGAAAGAGAGA 57.149 34.783 0.59 0.00 40.21 3.10
405 406 6.219417 TGTTGCAATTTTGGAAAGAGAGAA 57.781 33.333 0.59 0.00 40.21 2.87
406 407 6.275335 TGTTGCAATTTTGGAAAGAGAGAAG 58.725 36.000 0.59 0.00 40.21 2.85
407 408 6.096705 TGTTGCAATTTTGGAAAGAGAGAAGA 59.903 34.615 0.59 0.00 40.21 2.87
408 409 6.713762 TGCAATTTTGGAAAGAGAGAAGAA 57.286 33.333 0.00 0.00 0.00 2.52
409 410 7.111247 TGCAATTTTGGAAAGAGAGAAGAAA 57.889 32.000 0.00 0.00 0.00 2.52
410 411 7.205297 TGCAATTTTGGAAAGAGAGAAGAAAG 58.795 34.615 0.00 0.00 0.00 2.62
411 412 7.068593 TGCAATTTTGGAAAGAGAGAAGAAAGA 59.931 33.333 0.00 0.00 0.00 2.52
412 413 8.087136 GCAATTTTGGAAAGAGAGAAGAAAGAT 58.913 33.333 0.00 0.00 0.00 2.40
413 414 9.978044 CAATTTTGGAAAGAGAGAAGAAAGATT 57.022 29.630 0.00 0.00 0.00 2.40
418 419 9.587772 TTGGAAAGAGAGAAGAAAGATTATACG 57.412 33.333 0.00 0.00 0.00 3.06
419 420 8.967918 TGGAAAGAGAGAAGAAAGATTATACGA 58.032 33.333 0.00 0.00 0.00 3.43
420 421 9.974980 GGAAAGAGAGAAGAAAGATTATACGAT 57.025 33.333 0.00 0.00 0.00 3.73
424 425 8.296713 AGAGAGAAGAAAGATTATACGATGAGC 58.703 37.037 0.00 0.00 0.00 4.26
438 439 0.179045 ATGAGCGGCTATGGAACCAC 60.179 55.000 0.60 0.00 0.00 4.16
441 442 0.037590 AGCGGCTATGGAACCACAAA 59.962 50.000 0.00 0.00 0.00 2.83
442 443 1.102978 GCGGCTATGGAACCACAAAT 58.897 50.000 0.00 0.00 0.00 2.32
443 444 1.476488 GCGGCTATGGAACCACAAATT 59.524 47.619 0.00 0.00 0.00 1.82
444 445 2.735126 GCGGCTATGGAACCACAAATTG 60.735 50.000 0.00 0.00 0.00 2.32
446 447 3.181497 CGGCTATGGAACCACAAATTGAG 60.181 47.826 0.00 0.00 0.00 3.02
447 448 4.016444 GGCTATGGAACCACAAATTGAGA 58.984 43.478 0.00 0.00 0.00 3.27
448 449 4.646492 GGCTATGGAACCACAAATTGAGAT 59.354 41.667 0.00 0.00 0.00 2.75
453 457 6.729690 TGGAACCACAAATTGAGATTTCTT 57.270 33.333 0.00 0.00 33.25 2.52
545 552 5.186996 TCTCTTTTTGAAACAGATGCCAC 57.813 39.130 0.00 0.00 0.00 5.01
578 585 0.179084 CATGGTCGTGGCTCGGTTAT 60.179 55.000 9.26 0.00 40.32 1.89
579 586 1.067974 CATGGTCGTGGCTCGGTTATA 59.932 52.381 9.26 0.00 40.32 0.98
596 603 5.633927 GGTTATAACAACCCACAAATCGTC 58.366 41.667 17.16 0.00 34.26 4.20
774 790 3.622826 CCCGTCCAACCACGTCCT 61.623 66.667 0.00 0.00 38.14 3.85
830 846 3.845259 GCCACCAGCCGTCCGATA 61.845 66.667 0.00 0.00 34.35 2.92
832 848 2.717044 CCACCAGCCGTCCGATACA 61.717 63.158 0.00 0.00 0.00 2.29
1014 1039 4.615815 GCGATGGCGATGGAGGCT 62.616 66.667 0.00 0.00 40.82 4.58
1069 1094 0.322456 CAAGGGGTTCGGCTTCATCA 60.322 55.000 0.00 0.00 0.00 3.07
1347 1372 2.207924 GGACGGATCTGGCGGGTAT 61.208 63.158 6.47 0.00 0.00 2.73
1350 1375 2.507854 CGGATCTGGCGGGTATGGT 61.508 63.158 0.00 0.00 0.00 3.55
1521 1932 3.127533 GGCTGCTACAAGTGCGGG 61.128 66.667 0.00 0.00 37.29 6.13
2107 2518 1.216710 GATCGATCGATCTGGGCCC 59.783 63.158 38.45 17.59 45.42 5.80
2108 2519 1.533994 ATCGATCGATCTGGGCCCA 60.534 57.895 26.67 26.67 0.00 5.36
2180 2591 2.593978 CGGAGTCCGTCCTAGGGA 59.406 66.667 23.83 0.00 44.35 4.20
2307 2735 7.329499 TGATGGATTATTGGTGATTTTTGTGG 58.671 34.615 0.00 0.00 0.00 4.17
2314 2747 5.804944 TTGGTGATTTTTGTGGTGATGAT 57.195 34.783 0.00 0.00 0.00 2.45
2370 2803 5.239306 TCATCGATGAAGTAAAATGATGCCC 59.761 40.000 25.44 0.00 33.08 5.36
2459 2892 4.975631 TCTGCTCTAGTGGTAGGACTATC 58.024 47.826 0.00 0.00 0.00 2.08
2481 2914 3.949842 TCTCTGTCTGTCATCCTGTTG 57.050 47.619 0.00 0.00 0.00 3.33
2492 2932 8.299570 GTCTGTCATCCTGTTGTTAATTGATTT 58.700 33.333 0.00 0.00 0.00 2.17
2514 2956 4.634012 ATCAGGTACAGTTTGCAAGGTA 57.366 40.909 0.00 1.43 0.00 3.08
2529 2971 4.394920 TGCAAGGTAATTAACTAGTGCTGC 59.605 41.667 21.87 18.36 33.23 5.25
2530 2972 4.636206 GCAAGGTAATTAACTAGTGCTGCT 59.364 41.667 16.61 0.00 0.00 4.24
2531 2973 5.815740 GCAAGGTAATTAACTAGTGCTGCTA 59.184 40.000 16.61 0.00 0.00 3.49
2555 2997 4.843220 ACTTTCATCTGCTGAGGTTTTG 57.157 40.909 5.14 0.00 34.68 2.44
2556 2998 4.210331 ACTTTCATCTGCTGAGGTTTTGT 58.790 39.130 5.14 0.00 34.68 2.83
2579 3022 1.961394 GGGGAAAGTGAGGTTTTGTCC 59.039 52.381 0.00 0.00 0.00 4.02
2581 3024 2.294979 GGAAAGTGAGGTTTTGTCCGT 58.705 47.619 0.00 0.00 0.00 4.69
2584 3027 3.547054 AAGTGAGGTTTTGTCCGTGTA 57.453 42.857 0.00 0.00 0.00 2.90
2585 3028 3.107642 AGTGAGGTTTTGTCCGTGTAG 57.892 47.619 0.00 0.00 0.00 2.74
2599 3042 0.969409 GTGTAGGCGTAGTGGAGGGT 60.969 60.000 0.00 0.00 0.00 4.34
2646 3089 1.411074 CCCTTTTAATCCGGGGGAAGG 60.411 57.143 0.00 8.66 39.42 3.46
2680 3123 2.664402 AAGCAATGGTGTCAGTTCCT 57.336 45.000 0.00 0.00 0.00 3.36
2757 3202 2.059541 GTCTAGTGGTTGCGTTGTCTC 58.940 52.381 0.00 0.00 0.00 3.36
2779 3224 1.743252 GCTAGCACTGTGTCTGGCC 60.743 63.158 21.02 0.00 31.67 5.36
2787 3232 2.359230 GTGTCTGGCCCTGCTCAC 60.359 66.667 0.00 0.00 0.00 3.51
2832 3284 6.118170 GCCATATACATCTCCAGCACAATAT 58.882 40.000 0.00 0.00 0.00 1.28
2840 3292 8.023021 ACATCTCCAGCACAATATAGAAGTTA 57.977 34.615 0.00 0.00 0.00 2.24
2841 3293 7.928706 ACATCTCCAGCACAATATAGAAGTTAC 59.071 37.037 0.00 0.00 0.00 2.50
2842 3294 7.661536 TCTCCAGCACAATATAGAAGTTACT 57.338 36.000 0.00 0.00 0.00 2.24
2843 3295 8.079211 TCTCCAGCACAATATAGAAGTTACTT 57.921 34.615 0.00 0.00 0.00 2.24
2844 3296 8.540388 TCTCCAGCACAATATAGAAGTTACTTT 58.460 33.333 0.00 0.00 0.00 2.66
2845 3297 9.167311 CTCCAGCACAATATAGAAGTTACTTTT 57.833 33.333 0.00 0.00 0.00 2.27
2846 3298 9.515226 TCCAGCACAATATAGAAGTTACTTTTT 57.485 29.630 0.00 0.00 0.00 1.94
2865 3317 8.927675 ACTTTTTATAACAACTCCATGTACCA 57.072 30.769 0.00 0.00 32.02 3.25
2866 3318 9.010029 ACTTTTTATAACAACTCCATGTACCAG 57.990 33.333 0.00 0.00 32.02 4.00
2867 3319 9.226606 CTTTTTATAACAACTCCATGTACCAGA 57.773 33.333 0.00 0.00 32.02 3.86
2868 3320 8.786826 TTTTATAACAACTCCATGTACCAGAG 57.213 34.615 0.00 0.00 32.02 3.35
2869 3321 2.770164 ACAACTCCATGTACCAGAGC 57.230 50.000 4.33 0.00 0.00 4.09
2870 3322 1.279271 ACAACTCCATGTACCAGAGCC 59.721 52.381 4.33 0.00 0.00 4.70
2871 3323 0.912486 AACTCCATGTACCAGAGCCC 59.088 55.000 4.33 0.00 0.00 5.19
2872 3324 0.252696 ACTCCATGTACCAGAGCCCA 60.253 55.000 4.33 0.00 0.00 5.36
2873 3325 0.467384 CTCCATGTACCAGAGCCCAG 59.533 60.000 0.00 0.00 0.00 4.45
2874 3326 1.153086 CCATGTACCAGAGCCCAGC 60.153 63.158 0.00 0.00 0.00 4.85
2875 3327 1.153086 CATGTACCAGAGCCCAGCC 60.153 63.158 0.00 0.00 0.00 4.85
2876 3328 1.616327 ATGTACCAGAGCCCAGCCA 60.616 57.895 0.00 0.00 0.00 4.75
2877 3329 0.990282 ATGTACCAGAGCCCAGCCAT 60.990 55.000 0.00 0.00 0.00 4.40
2878 3330 1.153086 GTACCAGAGCCCAGCCATG 60.153 63.158 0.00 0.00 0.00 3.66
2879 3331 1.616327 TACCAGAGCCCAGCCATGT 60.616 57.895 0.00 0.00 0.00 3.21
2880 3332 1.626356 TACCAGAGCCCAGCCATGTC 61.626 60.000 0.00 0.00 0.00 3.06
2881 3333 2.124403 CAGAGCCCAGCCATGTCC 60.124 66.667 0.00 0.00 0.00 4.02
2882 3334 3.415087 AGAGCCCAGCCATGTCCC 61.415 66.667 0.00 0.00 0.00 4.46
2883 3335 4.864334 GAGCCCAGCCATGTCCCG 62.864 72.222 0.00 0.00 0.00 5.14
2902 3354 4.029809 GACCCGTCCCCAACCCAG 62.030 72.222 0.00 0.00 0.00 4.45
2984 3436 4.172512 CTGCTGCCGCCTCCTCAT 62.173 66.667 0.00 0.00 34.43 2.90
2985 3437 3.694058 CTGCTGCCGCCTCCTCATT 62.694 63.158 0.00 0.00 34.43 2.57
2986 3438 2.439156 GCTGCCGCCTCCTCATTT 60.439 61.111 0.00 0.00 0.00 2.32
2987 3439 1.153168 GCTGCCGCCTCCTCATTTA 60.153 57.895 0.00 0.00 0.00 1.40
2988 3440 1.440145 GCTGCCGCCTCCTCATTTAC 61.440 60.000 0.00 0.00 0.00 2.01
2989 3441 0.179000 CTGCCGCCTCCTCATTTACT 59.821 55.000 0.00 0.00 0.00 2.24
2990 3442 0.618458 TGCCGCCTCCTCATTTACTT 59.382 50.000 0.00 0.00 0.00 2.24
2991 3443 1.017387 GCCGCCTCCTCATTTACTTG 58.983 55.000 0.00 0.00 0.00 3.16
2992 3444 1.406887 GCCGCCTCCTCATTTACTTGA 60.407 52.381 0.00 0.00 0.00 3.02
2993 3445 2.280628 CCGCCTCCTCATTTACTTGAC 58.719 52.381 0.00 0.00 0.00 3.18
2994 3446 2.280628 CGCCTCCTCATTTACTTGACC 58.719 52.381 0.00 0.00 0.00 4.02
2995 3447 2.093447 CGCCTCCTCATTTACTTGACCT 60.093 50.000 0.00 0.00 0.00 3.85
2996 3448 3.536570 GCCTCCTCATTTACTTGACCTC 58.463 50.000 0.00 0.00 0.00 3.85
2997 3449 3.055094 GCCTCCTCATTTACTTGACCTCA 60.055 47.826 0.00 0.00 0.00 3.86
2998 3450 4.384647 GCCTCCTCATTTACTTGACCTCAT 60.385 45.833 0.00 0.00 0.00 2.90
2999 3451 5.363939 CCTCCTCATTTACTTGACCTCATC 58.636 45.833 0.00 0.00 0.00 2.92
3000 3452 5.011090 TCCTCATTTACTTGACCTCATCG 57.989 43.478 0.00 0.00 0.00 3.84
3001 3453 4.466370 TCCTCATTTACTTGACCTCATCGT 59.534 41.667 0.00 0.00 0.00 3.73
3002 3454 4.568359 CCTCATTTACTTGACCTCATCGTG 59.432 45.833 0.00 0.00 0.00 4.35
3003 3455 5.400066 TCATTTACTTGACCTCATCGTGA 57.600 39.130 0.00 0.00 0.00 4.35
3004 3456 5.789521 TCATTTACTTGACCTCATCGTGAA 58.210 37.500 0.00 0.00 0.00 3.18
3005 3457 6.227522 TCATTTACTTGACCTCATCGTGAAA 58.772 36.000 0.00 0.00 0.00 2.69
3006 3458 6.708502 TCATTTACTTGACCTCATCGTGAAAA 59.291 34.615 0.00 0.00 0.00 2.29
3007 3459 6.928979 TTTACTTGACCTCATCGTGAAAAA 57.071 33.333 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.929808 GTCTATGTTTGTGTGTCTTCGGAT 59.070 41.667 0.00 0.00 0.00 4.18
1 2 4.202172 TGTCTATGTTTGTGTGTCTTCGGA 60.202 41.667 0.00 0.00 0.00 4.55
2 3 4.055360 TGTCTATGTTTGTGTGTCTTCGG 58.945 43.478 0.00 0.00 0.00 4.30
3 4 5.651172 TTGTCTATGTTTGTGTGTCTTCG 57.349 39.130 0.00 0.00 0.00 3.79
4 5 7.587757 GTCATTTGTCTATGTTTGTGTGTCTTC 59.412 37.037 0.00 0.00 0.00 2.87
5 6 7.417612 GTCATTTGTCTATGTTTGTGTGTCTT 58.582 34.615 0.00 0.00 0.00 3.01
6 7 6.292865 CGTCATTTGTCTATGTTTGTGTGTCT 60.293 38.462 0.00 0.00 0.00 3.41
7 8 5.845953 CGTCATTTGTCTATGTTTGTGTGTC 59.154 40.000 0.00 0.00 0.00 3.67
8 9 5.525745 TCGTCATTTGTCTATGTTTGTGTGT 59.474 36.000 0.00 0.00 0.00 3.72
9 10 5.845953 GTCGTCATTTGTCTATGTTTGTGTG 59.154 40.000 0.00 0.00 0.00 3.82
10 11 5.049680 GGTCGTCATTTGTCTATGTTTGTGT 60.050 40.000 0.00 0.00 0.00 3.72
11 12 5.049749 TGGTCGTCATTTGTCTATGTTTGTG 60.050 40.000 0.00 0.00 0.00 3.33
12 13 5.060506 TGGTCGTCATTTGTCTATGTTTGT 58.939 37.500 0.00 0.00 0.00 2.83
13 14 5.605564 TGGTCGTCATTTGTCTATGTTTG 57.394 39.130 0.00 0.00 0.00 2.93
14 15 6.435428 GTTTGGTCGTCATTTGTCTATGTTT 58.565 36.000 0.00 0.00 0.00 2.83
15 16 5.048991 GGTTTGGTCGTCATTTGTCTATGTT 60.049 40.000 0.00 0.00 0.00 2.71
16 17 4.454504 GGTTTGGTCGTCATTTGTCTATGT 59.545 41.667 0.00 0.00 0.00 2.29
17 18 4.142687 GGGTTTGGTCGTCATTTGTCTATG 60.143 45.833 0.00 0.00 0.00 2.23
18 19 4.007659 GGGTTTGGTCGTCATTTGTCTAT 58.992 43.478 0.00 0.00 0.00 1.98
19 20 3.404899 GGGTTTGGTCGTCATTTGTCTA 58.595 45.455 0.00 0.00 0.00 2.59
20 21 2.227194 GGGTTTGGTCGTCATTTGTCT 58.773 47.619 0.00 0.00 0.00 3.41
21 22 1.069500 CGGGTTTGGTCGTCATTTGTC 60.069 52.381 0.00 0.00 0.00 3.18
22 23 0.948678 CGGGTTTGGTCGTCATTTGT 59.051 50.000 0.00 0.00 0.00 2.83
23 24 1.196808 CTCGGGTTTGGTCGTCATTTG 59.803 52.381 0.00 0.00 0.00 2.32
24 25 1.519408 CTCGGGTTTGGTCGTCATTT 58.481 50.000 0.00 0.00 0.00 2.32
25 26 0.953960 GCTCGGGTTTGGTCGTCATT 60.954 55.000 0.00 0.00 0.00 2.57
26 27 1.375523 GCTCGGGTTTGGTCGTCAT 60.376 57.895 0.00 0.00 0.00 3.06
27 28 2.029964 GCTCGGGTTTGGTCGTCA 59.970 61.111 0.00 0.00 0.00 4.35
28 29 2.027625 CTGCTCGGGTTTGGTCGTC 61.028 63.158 0.00 0.00 0.00 4.20
29 30 1.827399 ATCTGCTCGGGTTTGGTCGT 61.827 55.000 0.00 0.00 0.00 4.34
30 31 1.079127 ATCTGCTCGGGTTTGGTCG 60.079 57.895 0.00 0.00 0.00 4.79
31 32 0.744771 GGATCTGCTCGGGTTTGGTC 60.745 60.000 0.00 0.00 0.00 4.02
32 33 1.299976 GGATCTGCTCGGGTTTGGT 59.700 57.895 0.00 0.00 0.00 3.67
33 34 0.107017 ATGGATCTGCTCGGGTTTGG 60.107 55.000 0.00 0.00 0.00 3.28
34 35 1.303309 GATGGATCTGCTCGGGTTTG 58.697 55.000 0.00 0.00 0.00 2.93
35 36 0.179073 CGATGGATCTGCTCGGGTTT 60.179 55.000 0.00 0.00 0.00 3.27
36 37 1.043116 TCGATGGATCTGCTCGGGTT 61.043 55.000 10.62 0.00 33.38 4.11
37 38 1.043116 TTCGATGGATCTGCTCGGGT 61.043 55.000 10.62 0.00 33.38 5.28
38 39 0.319728 ATTCGATGGATCTGCTCGGG 59.680 55.000 10.62 0.00 33.38 5.14
39 40 2.029918 TGTATTCGATGGATCTGCTCGG 60.030 50.000 10.62 0.00 33.38 4.63
40 41 3.288809 TGTATTCGATGGATCTGCTCG 57.711 47.619 0.00 0.00 0.00 5.03
41 42 7.038048 TGAATATGTATTCGATGGATCTGCTC 58.962 38.462 7.92 0.00 43.80 4.26
42 43 6.939622 TGAATATGTATTCGATGGATCTGCT 58.060 36.000 7.92 0.00 43.80 4.24
43 44 7.783090 ATGAATATGTATTCGATGGATCTGC 57.217 36.000 7.92 0.00 43.80 4.26
44 45 8.610035 CCAATGAATATGTATTCGATGGATCTG 58.390 37.037 20.73 7.85 44.87 2.90
45 46 8.542926 TCCAATGAATATGTATTCGATGGATCT 58.457 33.333 22.38 1.28 45.21 2.75
46 47 8.722480 TCCAATGAATATGTATTCGATGGATC 57.278 34.615 22.38 0.00 45.21 3.36
47 48 8.542926 TCTCCAATGAATATGTATTCGATGGAT 58.457 33.333 24.37 7.67 46.78 3.41
48 49 7.819415 GTCTCCAATGAATATGTATTCGATGGA 59.181 37.037 23.52 23.52 46.39 3.41
49 50 7.603784 TGTCTCCAATGAATATGTATTCGATGG 59.396 37.037 19.98 19.98 44.21 3.51
50 51 8.538409 TGTCTCCAATGAATATGTATTCGATG 57.462 34.615 7.92 8.58 43.80 3.84
52 53 9.639601 GTATGTCTCCAATGAATATGTATTCGA 57.360 33.333 7.92 0.00 43.80 3.71
53 54 8.873830 GGTATGTCTCCAATGAATATGTATTCG 58.126 37.037 7.92 0.00 43.80 3.34
54 55 9.950496 AGGTATGTCTCCAATGAATATGTATTC 57.050 33.333 5.93 5.93 41.81 1.75
55 56 9.950496 GAGGTATGTCTCCAATGAATATGTATT 57.050 33.333 0.00 0.00 0.00 1.89
70 71 1.202698 GGGCATGTGGAGGTATGTCTC 60.203 57.143 0.00 0.00 0.00 3.36
71 72 0.839946 GGGCATGTGGAGGTATGTCT 59.160 55.000 0.00 0.00 0.00 3.41
72 73 0.546122 TGGGCATGTGGAGGTATGTC 59.454 55.000 0.00 0.00 0.00 3.06
73 74 0.255890 GTGGGCATGTGGAGGTATGT 59.744 55.000 0.00 0.00 0.00 2.29
74 75 0.466189 GGTGGGCATGTGGAGGTATG 60.466 60.000 0.00 0.00 0.00 2.39
75 76 0.918799 TGGTGGGCATGTGGAGGTAT 60.919 55.000 0.00 0.00 0.00 2.73
76 77 1.136961 TTGGTGGGCATGTGGAGGTA 61.137 55.000 0.00 0.00 0.00 3.08
77 78 1.803453 ATTGGTGGGCATGTGGAGGT 61.803 55.000 0.00 0.00 0.00 3.85
78 79 1.000739 ATTGGTGGGCATGTGGAGG 59.999 57.895 0.00 0.00 0.00 4.30
79 80 0.323633 TCATTGGTGGGCATGTGGAG 60.324 55.000 0.00 0.00 0.00 3.86
80 81 0.335705 ATCATTGGTGGGCATGTGGA 59.664 50.000 0.00 0.00 0.00 4.02
81 82 0.462375 CATCATTGGTGGGCATGTGG 59.538 55.000 0.00 0.00 0.00 4.17
82 83 0.179094 GCATCATTGGTGGGCATGTG 60.179 55.000 0.00 0.00 0.00 3.21
83 84 0.324923 AGCATCATTGGTGGGCATGT 60.325 50.000 0.00 0.00 30.87 3.21
84 85 1.611977 CTAGCATCATTGGTGGGCATG 59.388 52.381 0.00 0.00 34.79 4.06
85 86 1.496001 TCTAGCATCATTGGTGGGCAT 59.504 47.619 0.00 0.00 34.79 4.40
86 87 0.918258 TCTAGCATCATTGGTGGGCA 59.082 50.000 0.00 0.00 34.79 5.36
87 88 1.884579 CATCTAGCATCATTGGTGGGC 59.115 52.381 0.00 0.00 34.79 5.36
88 89 1.884579 GCATCTAGCATCATTGGTGGG 59.115 52.381 0.00 0.00 44.79 4.61
100 101 1.269309 CGTCCTACCAGTGCATCTAGC 60.269 57.143 0.00 0.00 45.96 3.42
101 102 1.338337 CCGTCCTACCAGTGCATCTAG 59.662 57.143 0.00 0.00 0.00 2.43
102 103 1.399714 CCGTCCTACCAGTGCATCTA 58.600 55.000 0.00 0.00 0.00 1.98
103 104 1.330655 CCCGTCCTACCAGTGCATCT 61.331 60.000 0.00 0.00 0.00 2.90
104 105 1.144057 CCCGTCCTACCAGTGCATC 59.856 63.158 0.00 0.00 0.00 3.91
105 106 2.367202 CCCCGTCCTACCAGTGCAT 61.367 63.158 0.00 0.00 0.00 3.96
106 107 3.000819 CCCCGTCCTACCAGTGCA 61.001 66.667 0.00 0.00 0.00 4.57
107 108 3.782443 CCCCCGTCCTACCAGTGC 61.782 72.222 0.00 0.00 0.00 4.40
108 109 2.866523 TAGCCCCCGTCCTACCAGTG 62.867 65.000 0.00 0.00 0.00 3.66
109 110 2.584873 CTAGCCCCCGTCCTACCAGT 62.585 65.000 0.00 0.00 0.00 4.00
110 111 1.833049 CTAGCCCCCGTCCTACCAG 60.833 68.421 0.00 0.00 0.00 4.00
111 112 2.281091 CTAGCCCCCGTCCTACCA 59.719 66.667 0.00 0.00 0.00 3.25
112 113 2.523657 CCTAGCCCCCGTCCTACC 60.524 72.222 0.00 0.00 0.00 3.18
113 114 3.232483 GCCTAGCCCCCGTCCTAC 61.232 72.222 0.00 0.00 0.00 3.18
114 115 3.751049 CTGCCTAGCCCCCGTCCTA 62.751 68.421 0.00 0.00 0.00 2.94
117 118 4.162690 CACTGCCTAGCCCCCGTC 62.163 72.222 0.00 0.00 0.00 4.79
118 119 4.715130 TCACTGCCTAGCCCCCGT 62.715 66.667 0.00 0.00 0.00 5.28
119 120 3.854669 CTCACTGCCTAGCCCCCG 61.855 72.222 0.00 0.00 0.00 5.73
120 121 1.995626 TTCTCACTGCCTAGCCCCC 60.996 63.158 0.00 0.00 0.00 5.40
121 122 1.222113 GTTCTCACTGCCTAGCCCC 59.778 63.158 0.00 0.00 0.00 5.80
122 123 1.153549 CGTTCTCACTGCCTAGCCC 60.154 63.158 0.00 0.00 0.00 5.19
123 124 0.037232 AACGTTCTCACTGCCTAGCC 60.037 55.000 0.00 0.00 0.00 3.93
124 125 2.649331 TAACGTTCTCACTGCCTAGC 57.351 50.000 2.82 0.00 0.00 3.42
125 126 4.113354 GGAATAACGTTCTCACTGCCTAG 58.887 47.826 2.82 0.00 0.00 3.02
126 127 3.512329 TGGAATAACGTTCTCACTGCCTA 59.488 43.478 2.82 0.00 0.00 3.93
127 128 2.301870 TGGAATAACGTTCTCACTGCCT 59.698 45.455 2.82 0.00 0.00 4.75
128 129 2.695359 TGGAATAACGTTCTCACTGCC 58.305 47.619 2.82 0.00 0.00 4.85
129 130 4.184629 AGATGGAATAACGTTCTCACTGC 58.815 43.478 2.82 0.00 0.00 4.40
130 131 7.010552 CCTTAAGATGGAATAACGTTCTCACTG 59.989 40.741 2.82 0.00 0.00 3.66
131 132 7.042335 CCTTAAGATGGAATAACGTTCTCACT 58.958 38.462 2.82 1.70 0.00 3.41
132 133 7.039882 TCCTTAAGATGGAATAACGTTCTCAC 58.960 38.462 2.82 0.00 0.00 3.51
133 134 7.177832 TCCTTAAGATGGAATAACGTTCTCA 57.822 36.000 2.82 0.00 0.00 3.27
134 135 7.764901 ACTTCCTTAAGATGGAATAACGTTCTC 59.235 37.037 2.82 2.57 42.03 2.87
135 136 7.621796 ACTTCCTTAAGATGGAATAACGTTCT 58.378 34.615 2.82 0.00 42.03 3.01
136 137 7.254017 CGACTTCCTTAAGATGGAATAACGTTC 60.254 40.741 2.82 0.00 42.03 3.95
137 138 6.534079 CGACTTCCTTAAGATGGAATAACGTT 59.466 38.462 5.88 5.88 42.03 3.99
138 139 6.040878 CGACTTCCTTAAGATGGAATAACGT 58.959 40.000 3.36 0.00 42.03 3.99
139 140 5.050972 GCGACTTCCTTAAGATGGAATAACG 60.051 44.000 3.36 7.41 42.03 3.18
140 141 5.236695 GGCGACTTCCTTAAGATGGAATAAC 59.763 44.000 3.36 0.00 42.03 1.89
141 142 5.365619 GGCGACTTCCTTAAGATGGAATAA 58.634 41.667 3.36 0.00 42.03 1.40
142 143 4.500887 CGGCGACTTCCTTAAGATGGAATA 60.501 45.833 0.00 0.00 42.03 1.75
143 144 3.741388 CGGCGACTTCCTTAAGATGGAAT 60.741 47.826 0.00 0.00 42.03 3.01
144 145 2.418197 CGGCGACTTCCTTAAGATGGAA 60.418 50.000 0.00 0.00 40.85 3.53
145 146 1.136305 CGGCGACTTCCTTAAGATGGA 59.864 52.381 0.00 0.00 36.50 3.41
146 147 1.571919 CGGCGACTTCCTTAAGATGG 58.428 55.000 0.00 0.00 36.50 3.51
147 148 0.931005 GCGGCGACTTCCTTAAGATG 59.069 55.000 12.98 0.00 36.50 2.90
148 149 0.179081 GGCGGCGACTTCCTTAAGAT 60.179 55.000 12.98 0.00 36.50 2.40
149 150 1.217244 GGCGGCGACTTCCTTAAGA 59.783 57.895 12.98 0.00 36.50 2.10
150 151 0.462047 ATGGCGGCGACTTCCTTAAG 60.462 55.000 16.45 0.00 38.77 1.85
151 152 0.461339 GATGGCGGCGACTTCCTTAA 60.461 55.000 16.45 0.00 0.00 1.85
152 153 1.143183 GATGGCGGCGACTTCCTTA 59.857 57.895 16.45 0.00 0.00 2.69
153 154 2.125106 GATGGCGGCGACTTCCTT 60.125 61.111 16.45 1.26 0.00 3.36
154 155 3.077556 AGATGGCGGCGACTTCCT 61.078 61.111 23.20 10.36 0.00 3.36
155 156 2.586357 GAGATGGCGGCGACTTCC 60.586 66.667 23.20 12.20 0.00 3.46
156 157 2.956964 CGAGATGGCGGCGACTTC 60.957 66.667 19.90 19.90 0.00 3.01
157 158 3.701604 GACGAGATGGCGGCGACTT 62.702 63.158 16.45 7.89 35.12 3.01
158 159 4.194720 GACGAGATGGCGGCGACT 62.195 66.667 16.45 5.91 35.12 4.18
159 160 3.701604 AAGACGAGATGGCGGCGAC 62.702 63.158 12.98 9.31 45.90 5.19
160 161 2.884087 GAAAGACGAGATGGCGGCGA 62.884 60.000 12.98 0.00 45.90 5.54
161 162 2.509336 AAAGACGAGATGGCGGCG 60.509 61.111 0.51 0.51 45.90 6.46
162 163 1.153549 AGAAAGACGAGATGGCGGC 60.154 57.895 0.00 0.00 40.32 6.53
163 164 0.173481 TCAGAAAGACGAGATGGCGG 59.827 55.000 0.00 0.00 35.12 6.13
164 165 1.996292 TTCAGAAAGACGAGATGGCG 58.004 50.000 0.00 0.00 37.29 5.69
165 166 4.054671 CCTATTCAGAAAGACGAGATGGC 58.945 47.826 0.00 0.00 0.00 4.40
166 167 5.163509 TGTCCTATTCAGAAAGACGAGATGG 60.164 44.000 0.00 0.00 0.00 3.51
167 168 5.746245 GTGTCCTATTCAGAAAGACGAGATG 59.254 44.000 0.00 0.00 0.00 2.90
168 169 5.419155 TGTGTCCTATTCAGAAAGACGAGAT 59.581 40.000 0.00 0.00 0.00 2.75
169 170 4.765339 TGTGTCCTATTCAGAAAGACGAGA 59.235 41.667 0.00 0.00 0.00 4.04
170 171 5.060662 TGTGTCCTATTCAGAAAGACGAG 57.939 43.478 0.00 0.00 0.00 4.18
171 172 5.462530 TTGTGTCCTATTCAGAAAGACGA 57.537 39.130 0.00 0.00 0.00 4.20
172 173 5.107065 GGTTTGTGTCCTATTCAGAAAGACG 60.107 44.000 6.78 0.00 30.82 4.18
173 174 5.181433 GGGTTTGTGTCCTATTCAGAAAGAC 59.819 44.000 4.97 4.97 30.82 3.01
174 175 5.073144 AGGGTTTGTGTCCTATTCAGAAAGA 59.927 40.000 0.00 0.00 30.82 2.52
175 176 5.316987 AGGGTTTGTGTCCTATTCAGAAAG 58.683 41.667 0.00 0.00 30.82 2.62
176 177 5.319043 AGGGTTTGTGTCCTATTCAGAAA 57.681 39.130 0.00 0.00 0.00 2.52
177 178 4.993705 AGGGTTTGTGTCCTATTCAGAA 57.006 40.909 0.00 0.00 0.00 3.02
178 179 6.636454 ATTAGGGTTTGTGTCCTATTCAGA 57.364 37.500 0.00 0.00 35.75 3.27
180 181 9.841295 GTTATATTAGGGTTTGTGTCCTATTCA 57.159 33.333 0.00 0.00 35.75 2.57
204 205 9.902196 CCCGTTTTTACATGTTTCTTTATAGTT 57.098 29.630 2.30 0.00 0.00 2.24
205 206 8.024865 GCCCGTTTTTACATGTTTCTTTATAGT 58.975 33.333 2.30 0.00 0.00 2.12
206 207 7.486870 GGCCCGTTTTTACATGTTTCTTTATAG 59.513 37.037 2.30 0.00 0.00 1.31
207 208 7.039923 TGGCCCGTTTTTACATGTTTCTTTATA 60.040 33.333 2.30 0.00 0.00 0.98
208 209 6.160684 GGCCCGTTTTTACATGTTTCTTTAT 58.839 36.000 2.30 0.00 0.00 1.40
209 210 5.068723 TGGCCCGTTTTTACATGTTTCTTTA 59.931 36.000 2.30 0.00 0.00 1.85
210 211 4.141914 TGGCCCGTTTTTACATGTTTCTTT 60.142 37.500 2.30 0.00 0.00 2.52
211 212 3.385111 TGGCCCGTTTTTACATGTTTCTT 59.615 39.130 2.30 0.00 0.00 2.52
212 213 2.959707 TGGCCCGTTTTTACATGTTTCT 59.040 40.909 2.30 0.00 0.00 2.52
213 214 3.372660 TGGCCCGTTTTTACATGTTTC 57.627 42.857 2.30 0.00 0.00 2.78
214 215 3.306433 GGATGGCCCGTTTTTACATGTTT 60.306 43.478 2.30 0.00 0.00 2.83
215 216 2.232696 GGATGGCCCGTTTTTACATGTT 59.767 45.455 2.30 0.00 0.00 2.71
216 217 1.822371 GGATGGCCCGTTTTTACATGT 59.178 47.619 2.69 2.69 0.00 3.21
217 218 1.136110 GGGATGGCCCGTTTTTACATG 59.864 52.381 0.00 0.00 46.48 3.21
218 219 1.480789 GGGATGGCCCGTTTTTACAT 58.519 50.000 0.00 0.00 46.48 2.29
219 220 2.964343 GGGATGGCCCGTTTTTACA 58.036 52.632 0.00 0.00 46.48 2.41
231 232 4.569180 ATGAAGGCGCGGGGATGG 62.569 66.667 8.83 0.00 0.00 3.51
232 233 3.282157 CATGAAGGCGCGGGGATG 61.282 66.667 8.83 0.00 0.00 3.51
233 234 4.569180 CCATGAAGGCGCGGGGAT 62.569 66.667 8.83 0.00 0.00 3.85
237 238 2.587322 TTAGGACCATGAAGGCGCGG 62.587 60.000 8.83 0.00 43.14 6.46
238 239 1.153449 TTAGGACCATGAAGGCGCG 60.153 57.895 0.00 0.00 43.14 6.86
239 240 0.815615 CCTTAGGACCATGAAGGCGC 60.816 60.000 0.00 0.00 43.14 6.53
240 241 3.386543 CCTTAGGACCATGAAGGCG 57.613 57.895 0.00 0.00 43.14 5.52
242 243 0.918983 TGGCCTTAGGACCATGAAGG 59.081 55.000 0.00 13.14 42.32 3.46
243 244 2.954318 CAATGGCCTTAGGACCATGAAG 59.046 50.000 21.73 13.86 46.04 3.02
244 245 2.358090 CCAATGGCCTTAGGACCATGAA 60.358 50.000 21.73 0.00 46.04 2.57
245 246 1.215173 CCAATGGCCTTAGGACCATGA 59.785 52.381 21.73 0.00 46.04 3.07
246 247 1.215173 TCCAATGGCCTTAGGACCATG 59.785 52.381 21.73 12.23 46.04 3.66
248 249 0.918983 CTCCAATGGCCTTAGGACCA 59.081 55.000 14.83 14.83 41.06 4.02
249 250 1.134068 GTCTCCAATGGCCTTAGGACC 60.134 57.143 0.00 3.00 0.00 4.46
250 251 1.473434 CGTCTCCAATGGCCTTAGGAC 60.473 57.143 3.32 0.00 0.00 3.85
251 252 0.830648 CGTCTCCAATGGCCTTAGGA 59.169 55.000 3.32 7.40 0.00 2.94
252 253 0.830648 TCGTCTCCAATGGCCTTAGG 59.169 55.000 3.32 2.51 0.00 2.69
253 254 1.202580 CCTCGTCTCCAATGGCCTTAG 60.203 57.143 3.32 0.00 0.00 2.18
254 255 0.830648 CCTCGTCTCCAATGGCCTTA 59.169 55.000 3.32 0.00 0.00 2.69
255 256 1.604378 CCTCGTCTCCAATGGCCTT 59.396 57.895 3.32 0.00 0.00 4.35
256 257 3.036429 GCCTCGTCTCCAATGGCCT 62.036 63.158 3.32 0.00 37.81 5.19
257 258 2.514824 GCCTCGTCTCCAATGGCC 60.515 66.667 0.00 0.00 37.81 5.36
258 259 2.852495 TTCGCCTCGTCTCCAATGGC 62.852 60.000 0.00 0.00 40.14 4.40
259 260 1.084370 GTTCGCCTCGTCTCCAATGG 61.084 60.000 0.00 0.00 0.00 3.16
260 261 1.084370 GGTTCGCCTCGTCTCCAATG 61.084 60.000 0.00 0.00 0.00 2.82
261 262 1.218316 GGTTCGCCTCGTCTCCAAT 59.782 57.895 0.00 0.00 0.00 3.16
262 263 2.654877 GGTTCGCCTCGTCTCCAA 59.345 61.111 0.00 0.00 0.00 3.53
263 264 3.744719 CGGTTCGCCTCGTCTCCA 61.745 66.667 0.00 0.00 34.30 3.86
264 265 4.493747 CCGGTTCGCCTCGTCTCC 62.494 72.222 0.00 0.00 34.30 3.71
286 287 6.202439 TAGGATTCCTCTATATCGCGTAGCC 61.202 48.000 8.94 0.00 43.25 3.93
287 288 4.815308 TAGGATTCCTCTATATCGCGTAGC 59.185 45.833 8.94 0.00 42.90 3.58
288 289 6.922247 TTAGGATTCCTCTATATCGCGTAG 57.078 41.667 8.94 0.09 34.61 3.51
289 290 7.281098 AGATTAGGATTCCTCTATATCGCGTA 58.719 38.462 8.94 0.00 34.61 4.42
290 291 6.123651 AGATTAGGATTCCTCTATATCGCGT 58.876 40.000 8.94 0.00 34.61 6.01
291 292 6.485313 AGAGATTAGGATTCCTCTATATCGCG 59.515 42.308 8.94 0.00 34.54 5.87
292 293 7.817418 AGAGATTAGGATTCCTCTATATCGC 57.183 40.000 8.94 9.81 34.54 4.58
318 319 2.487265 GCTGTCTCCTCACTCCCAAAAA 60.487 50.000 0.00 0.00 0.00 1.94
319 320 1.072331 GCTGTCTCCTCACTCCCAAAA 59.928 52.381 0.00 0.00 0.00 2.44
320 321 0.687354 GCTGTCTCCTCACTCCCAAA 59.313 55.000 0.00 0.00 0.00 3.28
321 322 0.471780 TGCTGTCTCCTCACTCCCAA 60.472 55.000 0.00 0.00 0.00 4.12
322 323 0.902048 CTGCTGTCTCCTCACTCCCA 60.902 60.000 0.00 0.00 0.00 4.37
323 324 1.896694 CTGCTGTCTCCTCACTCCC 59.103 63.158 0.00 0.00 0.00 4.30
324 325 1.217779 GCTGCTGTCTCCTCACTCC 59.782 63.158 0.00 0.00 0.00 3.85
325 326 1.217779 GGCTGCTGTCTCCTCACTC 59.782 63.158 0.00 0.00 0.00 3.51
326 327 2.644212 CGGCTGCTGTCTCCTCACT 61.644 63.158 0.00 0.00 0.00 3.41
327 328 2.125753 CGGCTGCTGTCTCCTCAC 60.126 66.667 0.00 0.00 0.00 3.51
328 329 2.601666 ACGGCTGCTGTCTCCTCA 60.602 61.111 8.62 0.00 0.00 3.86
329 330 2.125753 CACGGCTGCTGTCTCCTC 60.126 66.667 11.96 0.00 0.00 3.71
330 331 2.919856 ACACGGCTGCTGTCTCCT 60.920 61.111 11.96 0.00 0.00 3.69
331 332 2.740055 CACACGGCTGCTGTCTCC 60.740 66.667 11.96 0.00 0.00 3.71
332 333 0.319555 TAACACACGGCTGCTGTCTC 60.320 55.000 11.96 0.00 0.00 3.36
333 334 0.321671 ATAACACACGGCTGCTGTCT 59.678 50.000 11.96 0.00 0.00 3.41
334 335 0.721718 GATAACACACGGCTGCTGTC 59.278 55.000 11.96 0.00 0.00 3.51
335 336 0.034756 TGATAACACACGGCTGCTGT 59.965 50.000 8.62 8.62 0.00 4.40
336 337 1.155889 TTGATAACACACGGCTGCTG 58.844 50.000 6.98 6.98 0.00 4.41
337 338 2.009774 GATTGATAACACACGGCTGCT 58.990 47.619 0.00 0.00 0.00 4.24
338 339 1.737236 TGATTGATAACACACGGCTGC 59.263 47.619 0.00 0.00 0.00 5.25
339 340 4.142622 ACAATGATTGATAACACACGGCTG 60.143 41.667 12.80 0.00 0.00 4.85
340 341 4.009675 ACAATGATTGATAACACACGGCT 58.990 39.130 12.80 0.00 0.00 5.52
341 342 4.355543 ACAATGATTGATAACACACGGC 57.644 40.909 12.80 0.00 0.00 5.68
342 343 4.558470 GCAACAATGATTGATAACACACGG 59.442 41.667 12.80 0.00 0.00 4.94
343 344 5.152804 TGCAACAATGATTGATAACACACG 58.847 37.500 12.80 0.00 0.00 4.49
344 345 7.585286 ATTGCAACAATGATTGATAACACAC 57.415 32.000 12.80 0.00 0.00 3.82
345 346 8.496751 CAAATTGCAACAATGATTGATAACACA 58.503 29.630 12.80 0.00 0.00 3.72
346 347 7.479291 GCAAATTGCAACAATGATTGATAACAC 59.521 33.333 13.73 0.00 44.26 3.32
347 348 7.519843 GCAAATTGCAACAATGATTGATAACA 58.480 30.769 13.73 0.00 44.26 2.41
348 349 7.942145 GCAAATTGCAACAATGATTGATAAC 57.058 32.000 13.73 0.00 44.26 1.89
364 365 1.070038 CATGGTCCGTTGCAAATTGC 58.930 50.000 11.58 11.58 45.29 3.56
365 366 2.437200 ACATGGTCCGTTGCAAATTG 57.563 45.000 0.00 0.00 0.00 2.32
366 367 2.753296 CAACATGGTCCGTTGCAAATT 58.247 42.857 0.00 0.00 37.53 1.82
367 368 2.437200 CAACATGGTCCGTTGCAAAT 57.563 45.000 0.00 0.00 37.53 2.32
368 369 3.955291 CAACATGGTCCGTTGCAAA 57.045 47.368 0.00 0.00 37.53 3.68
372 373 2.437200 AATTGCAACATGGTCCGTTG 57.563 45.000 0.00 5.51 45.25 4.10
373 374 3.129871 CAAAATTGCAACATGGTCCGTT 58.870 40.909 0.00 0.00 0.00 4.44
374 375 2.547642 CCAAAATTGCAACATGGTCCGT 60.548 45.455 15.46 0.00 0.00 4.69
375 376 2.067766 CCAAAATTGCAACATGGTCCG 58.932 47.619 15.46 0.00 0.00 4.79
376 377 3.399440 TCCAAAATTGCAACATGGTCC 57.601 42.857 20.38 0.00 32.90 4.46
377 378 5.055812 TCTTTCCAAAATTGCAACATGGTC 58.944 37.500 20.38 0.00 32.90 4.02
378 379 5.033589 TCTTTCCAAAATTGCAACATGGT 57.966 34.783 20.38 0.00 32.90 3.55
379 380 5.299148 TCTCTTTCCAAAATTGCAACATGG 58.701 37.500 16.92 16.92 0.00 3.66
380 381 6.218019 TCTCTCTTTCCAAAATTGCAACATG 58.782 36.000 0.00 0.69 0.00 3.21
381 382 6.409524 TCTCTCTTTCCAAAATTGCAACAT 57.590 33.333 0.00 0.00 0.00 2.71
382 383 5.850557 TCTCTCTTTCCAAAATTGCAACA 57.149 34.783 0.00 0.00 0.00 3.33
383 384 6.507023 TCTTCTCTCTTTCCAAAATTGCAAC 58.493 36.000 0.00 0.00 0.00 4.17
384 385 6.713762 TCTTCTCTCTTTCCAAAATTGCAA 57.286 33.333 0.00 0.00 0.00 4.08
385 386 6.713762 TTCTTCTCTCTTTCCAAAATTGCA 57.286 33.333 0.00 0.00 0.00 4.08
386 387 7.428826 TCTTTCTTCTCTCTTTCCAAAATTGC 58.571 34.615 0.00 0.00 0.00 3.56
387 388 9.978044 AATCTTTCTTCTCTCTTTCCAAAATTG 57.022 29.630 0.00 0.00 0.00 2.32
392 393 9.587772 CGTATAATCTTTCTTCTCTCTTTCCAA 57.412 33.333 0.00 0.00 0.00 3.53
393 394 8.967918 TCGTATAATCTTTCTTCTCTCTTTCCA 58.032 33.333 0.00 0.00 0.00 3.53
394 395 9.974980 ATCGTATAATCTTTCTTCTCTCTTTCC 57.025 33.333 0.00 0.00 0.00 3.13
398 399 8.296713 GCTCATCGTATAATCTTTCTTCTCTCT 58.703 37.037 0.00 0.00 0.00 3.10
399 400 7.270365 CGCTCATCGTATAATCTTTCTTCTCTC 59.730 40.741 0.00 0.00 0.00 3.20
400 401 7.081349 CGCTCATCGTATAATCTTTCTTCTCT 58.919 38.462 0.00 0.00 0.00 3.10
401 402 6.306837 CCGCTCATCGTATAATCTTTCTTCTC 59.693 42.308 0.00 0.00 36.19 2.87
402 403 6.153067 CCGCTCATCGTATAATCTTTCTTCT 58.847 40.000 0.00 0.00 36.19 2.85
403 404 5.164041 GCCGCTCATCGTATAATCTTTCTTC 60.164 44.000 0.00 0.00 36.19 2.87
404 405 4.686554 GCCGCTCATCGTATAATCTTTCTT 59.313 41.667 0.00 0.00 36.19 2.52
405 406 4.021894 AGCCGCTCATCGTATAATCTTTCT 60.022 41.667 0.00 0.00 36.19 2.52
406 407 4.238514 AGCCGCTCATCGTATAATCTTTC 58.761 43.478 0.00 0.00 36.19 2.62
407 408 4.258702 AGCCGCTCATCGTATAATCTTT 57.741 40.909 0.00 0.00 36.19 2.52
408 409 3.944055 AGCCGCTCATCGTATAATCTT 57.056 42.857 0.00 0.00 36.19 2.40
409 410 4.202060 CCATAGCCGCTCATCGTATAATCT 60.202 45.833 0.00 0.00 36.19 2.40
410 411 4.045104 CCATAGCCGCTCATCGTATAATC 58.955 47.826 0.00 0.00 36.19 1.75
411 412 3.699538 TCCATAGCCGCTCATCGTATAAT 59.300 43.478 0.00 0.00 36.19 1.28
412 413 3.086282 TCCATAGCCGCTCATCGTATAA 58.914 45.455 0.00 0.00 36.19 0.98
413 414 2.718563 TCCATAGCCGCTCATCGTATA 58.281 47.619 0.00 0.00 36.19 1.47
414 415 1.545841 TCCATAGCCGCTCATCGTAT 58.454 50.000 0.00 0.00 36.19 3.06
415 416 1.000607 GTTCCATAGCCGCTCATCGTA 60.001 52.381 0.00 0.00 36.19 3.43
416 417 0.249489 GTTCCATAGCCGCTCATCGT 60.249 55.000 0.00 0.00 36.19 3.73
417 418 0.946221 GGTTCCATAGCCGCTCATCG 60.946 60.000 0.00 0.00 38.08 3.84
418 419 0.106708 TGGTTCCATAGCCGCTCATC 59.893 55.000 0.00 0.00 0.00 2.92
419 420 0.179045 GTGGTTCCATAGCCGCTCAT 60.179 55.000 0.00 0.00 32.87 2.90
420 421 1.220749 GTGGTTCCATAGCCGCTCA 59.779 57.895 0.00 0.00 32.87 4.26
421 422 0.392461 TTGTGGTTCCATAGCCGCTC 60.392 55.000 0.00 0.00 36.33 5.03
422 423 0.037590 TTTGTGGTTCCATAGCCGCT 59.962 50.000 0.00 0.00 36.33 5.52
423 424 1.102978 ATTTGTGGTTCCATAGCCGC 58.897 50.000 0.00 0.00 35.93 6.53
424 425 2.752354 TCAATTTGTGGTTCCATAGCCG 59.248 45.455 0.00 0.00 0.00 5.52
425 426 4.016444 TCTCAATTTGTGGTTCCATAGCC 58.984 43.478 0.00 0.00 0.00 3.93
566 573 2.011947 GGGTTGTTATAACCGAGCCAC 58.988 52.381 22.48 8.55 41.18 5.01
578 585 3.061322 CTCGACGATTTGTGGGTTGTTA 58.939 45.455 0.00 0.00 0.00 2.41
579 586 1.871039 CTCGACGATTTGTGGGTTGTT 59.129 47.619 0.00 0.00 0.00 2.83
596 603 1.825285 CGCGGGAATCAATGCTCTCG 61.825 60.000 0.00 0.91 38.60 4.04
756 772 4.692475 GGACGTGGTTGGACGGGG 62.692 72.222 0.00 0.00 43.84 5.73
937 962 2.607750 TCTCTTTCCCTGGCGCCT 60.608 61.111 29.70 0.00 0.00 5.52
938 963 2.124942 CTCTCTTTCCCTGGCGCC 60.125 66.667 22.73 22.73 0.00 6.53
939 964 1.153469 CTCTCTCTTTCCCTGGCGC 60.153 63.158 0.00 0.00 0.00 6.53
940 965 0.898320 TTCTCTCTCTTTCCCTGGCG 59.102 55.000 0.00 0.00 0.00 5.69
941 966 3.425162 TTTTCTCTCTCTTTCCCTGGC 57.575 47.619 0.00 0.00 0.00 4.85
966 991 0.389426 CCCTACCGACGAACTGGTTG 60.389 60.000 0.00 0.00 39.70 3.77
967 992 0.829182 ACCCTACCGACGAACTGGTT 60.829 55.000 0.00 0.00 39.70 3.67
968 993 0.829182 AACCCTACCGACGAACTGGT 60.829 55.000 0.00 0.00 42.34 4.00
969 994 0.319405 AAACCCTACCGACGAACTGG 59.681 55.000 0.00 0.00 0.00 4.00
971 996 0.242017 CGAAACCCTACCGACGAACT 59.758 55.000 0.00 0.00 0.00 3.01
972 997 0.733909 CCGAAACCCTACCGACGAAC 60.734 60.000 0.00 0.00 0.00 3.95
973 998 1.586028 CCGAAACCCTACCGACGAA 59.414 57.895 0.00 0.00 0.00 3.85
1014 1039 2.038329 ACCGTCCCCTTCATCCGA 59.962 61.111 0.00 0.00 0.00 4.55
1257 1282 2.537714 ATCCGAAGCCTCCACCTCCT 62.538 60.000 0.00 0.00 0.00 3.69
1260 1285 2.066999 GGATCCGAAGCCTCCACCT 61.067 63.158 0.00 0.00 0.00 4.00
1389 1414 4.292178 CCGCCGGATCTCCTCTGC 62.292 72.222 5.05 0.00 0.00 4.26
1876 2287 2.573869 CAGTCCCTCGCGATGTGT 59.426 61.111 10.36 0.00 0.00 3.72
2119 2530 0.392461 AAATAAGCGAGGCGGCTGAA 60.392 50.000 19.63 0.00 43.93 3.02
2120 2531 0.392461 AAAATAAGCGAGGCGGCTGA 60.392 50.000 19.63 0.00 43.93 4.26
2167 2578 1.897802 TGACTTTTCCCTAGGACGGAC 59.102 52.381 11.48 0.00 0.00 4.79
2180 2591 4.442192 GGACTGACTGACTGACTGACTTTT 60.442 45.833 0.00 0.00 0.00 2.27
2307 2735 5.527951 AGATCTGTTGCAATCTCATCATCAC 59.472 40.000 0.59 0.00 0.00 3.06
2370 2803 5.709966 TCATGGAGGATGATAATAACGACG 58.290 41.667 0.00 0.00 36.06 5.12
2399 2832 9.239551 ACAAGAGAGAATTCATTCATTCATTCA 57.760 29.630 8.44 0.00 39.23 2.57
2400 2833 9.719279 GACAAGAGAGAATTCATTCATTCATTC 57.281 33.333 8.44 0.00 39.23 2.67
2401 2834 9.239551 TGACAAGAGAGAATTCATTCATTCATT 57.760 29.630 8.44 0.00 39.23 2.57
2459 2892 4.182339 CAACAGGATGACAGACAGAGATG 58.818 47.826 0.00 0.00 39.69 2.90
2492 2932 4.634012 ACCTTGCAAACTGTACCTGATA 57.366 40.909 0.00 0.00 0.00 2.15
2495 2937 5.705609 AATTACCTTGCAAACTGTACCTG 57.294 39.130 0.00 0.00 0.00 4.00
2497 2939 7.210718 AGTTAATTACCTTGCAAACTGTACC 57.789 36.000 0.00 0.00 0.00 3.34
2508 2950 7.470289 CTAGCAGCACTAGTTAATTACCTTG 57.530 40.000 0.00 0.00 43.07 3.61
2529 2971 5.590530 ACCTCAGCAGATGAAAGTACTAG 57.409 43.478 0.00 0.00 37.52 2.57
2530 2972 6.360370 AAACCTCAGCAGATGAAAGTACTA 57.640 37.500 0.00 0.00 37.52 1.82
2531 2973 4.899352 AACCTCAGCAGATGAAAGTACT 57.101 40.909 0.00 0.00 37.52 2.73
2555 2997 2.067365 AAACCTCACTTTCCCCACAC 57.933 50.000 0.00 0.00 0.00 3.82
2556 2998 2.291930 ACAAAACCTCACTTTCCCCACA 60.292 45.455 0.00 0.00 0.00 4.17
2579 3022 1.432251 CCTCCACTACGCCTACACG 59.568 63.158 0.00 0.00 39.50 4.49
2581 3024 0.625316 TACCCTCCACTACGCCTACA 59.375 55.000 0.00 0.00 0.00 2.74
2584 3027 1.192428 CTTTACCCTCCACTACGCCT 58.808 55.000 0.00 0.00 0.00 5.52
2585 3028 0.900421 ACTTTACCCTCCACTACGCC 59.100 55.000 0.00 0.00 0.00 5.68
2599 3042 8.106247 AGATCGCAAATCCAGTAAAAACTTTA 57.894 30.769 0.00 0.00 0.00 1.85
2646 3089 0.392461 TGCTTACCCCAGATTGACGC 60.392 55.000 0.00 0.00 0.00 5.19
2757 3202 2.886081 CCAGACACAGTGCTAGCTTAG 58.114 52.381 17.23 7.75 0.00 2.18
2799 3244 0.036732 ATGTATATGGCCCAGCACGG 59.963 55.000 0.00 0.00 0.00 4.94
2808 3260 3.407424 TGTGCTGGAGATGTATATGGC 57.593 47.619 0.00 0.00 0.00 4.40
2840 3292 8.927675 TGGTACATGGAGTTGTTATAAAAAGT 57.072 30.769 0.00 0.00 0.00 2.66
2841 3293 9.226606 TCTGGTACATGGAGTTGTTATAAAAAG 57.773 33.333 0.00 0.00 38.20 2.27
2842 3294 9.226606 CTCTGGTACATGGAGTTGTTATAAAAA 57.773 33.333 0.00 0.00 38.20 1.94
2843 3295 7.335924 GCTCTGGTACATGGAGTTGTTATAAAA 59.664 37.037 0.00 0.00 38.20 1.52
2844 3296 6.821665 GCTCTGGTACATGGAGTTGTTATAAA 59.178 38.462 0.00 0.00 38.20 1.40
2845 3297 6.346096 GCTCTGGTACATGGAGTTGTTATAA 58.654 40.000 0.00 0.00 38.20 0.98
2846 3298 5.163343 GGCTCTGGTACATGGAGTTGTTATA 60.163 44.000 0.00 0.00 38.20 0.98
2847 3299 4.384208 GGCTCTGGTACATGGAGTTGTTAT 60.384 45.833 0.00 0.00 38.20 1.89
2848 3300 3.055385 GGCTCTGGTACATGGAGTTGTTA 60.055 47.826 0.00 0.00 38.20 2.41
2849 3301 2.290323 GGCTCTGGTACATGGAGTTGTT 60.290 50.000 0.00 0.00 38.20 2.83
2850 3302 1.279271 GGCTCTGGTACATGGAGTTGT 59.721 52.381 0.00 0.00 38.20 3.32
2851 3303 1.407437 GGGCTCTGGTACATGGAGTTG 60.407 57.143 0.00 0.00 38.20 3.16
2852 3304 0.912486 GGGCTCTGGTACATGGAGTT 59.088 55.000 0.00 0.00 38.20 3.01
2853 3305 0.252696 TGGGCTCTGGTACATGGAGT 60.253 55.000 0.00 0.00 38.20 3.85
2854 3306 0.467384 CTGGGCTCTGGTACATGGAG 59.533 60.000 0.00 0.00 38.20 3.86
2855 3307 1.626356 GCTGGGCTCTGGTACATGGA 61.626 60.000 0.00 0.00 38.20 3.41
2856 3308 1.153086 GCTGGGCTCTGGTACATGG 60.153 63.158 0.00 0.00 38.20 3.66
2857 3309 1.153086 GGCTGGGCTCTGGTACATG 60.153 63.158 0.00 0.00 38.20 3.21
2858 3310 0.990282 ATGGCTGGGCTCTGGTACAT 60.990 55.000 0.00 0.00 38.20 2.29
2859 3311 1.616327 ATGGCTGGGCTCTGGTACA 60.616 57.895 0.00 0.00 0.00 2.90
2860 3312 1.153086 CATGGCTGGGCTCTGGTAC 60.153 63.158 0.00 0.00 0.00 3.34
2861 3313 1.616327 ACATGGCTGGGCTCTGGTA 60.616 57.895 0.00 0.00 0.00 3.25
2862 3314 2.937689 ACATGGCTGGGCTCTGGT 60.938 61.111 0.00 0.00 0.00 4.00
2863 3315 2.124403 GACATGGCTGGGCTCTGG 60.124 66.667 0.00 0.00 0.00 3.86
2864 3316 2.124403 GGACATGGCTGGGCTCTG 60.124 66.667 0.00 0.00 0.00 3.35
2865 3317 3.415087 GGGACATGGCTGGGCTCT 61.415 66.667 0.00 0.00 0.00 4.09
2866 3318 4.864334 CGGGACATGGCTGGGCTC 62.864 72.222 0.00 0.00 0.00 4.70
2885 3337 4.029809 CTGGGTTGGGGACGGGTC 62.030 72.222 0.00 0.00 0.00 4.46
2969 3421 1.153168 TAAATGAGGAGGCGGCAGC 60.153 57.895 13.08 0.00 44.18 5.25
2970 3422 0.179000 AGTAAATGAGGAGGCGGCAG 59.821 55.000 13.08 0.00 0.00 4.85
2971 3423 0.618458 AAGTAAATGAGGAGGCGGCA 59.382 50.000 13.08 0.00 0.00 5.69
2972 3424 1.017387 CAAGTAAATGAGGAGGCGGC 58.983 55.000 0.00 0.00 0.00 6.53
2973 3425 2.280628 GTCAAGTAAATGAGGAGGCGG 58.719 52.381 0.00 0.00 0.00 6.13
2974 3426 2.093447 AGGTCAAGTAAATGAGGAGGCG 60.093 50.000 0.00 0.00 0.00 5.52
2975 3427 3.055094 TGAGGTCAAGTAAATGAGGAGGC 60.055 47.826 0.00 0.00 0.00 4.70
2976 3428 4.826274 TGAGGTCAAGTAAATGAGGAGG 57.174 45.455 0.00 0.00 0.00 4.30
2977 3429 5.046529 CGATGAGGTCAAGTAAATGAGGAG 58.953 45.833 0.00 0.00 0.00 3.69
2978 3430 4.466370 ACGATGAGGTCAAGTAAATGAGGA 59.534 41.667 0.00 0.00 0.00 3.71
2979 3431 4.568359 CACGATGAGGTCAAGTAAATGAGG 59.432 45.833 0.00 0.00 0.00 3.86
2980 3432 5.410924 TCACGATGAGGTCAAGTAAATGAG 58.589 41.667 0.00 0.00 0.00 2.90
2981 3433 5.400066 TCACGATGAGGTCAAGTAAATGA 57.600 39.130 0.00 0.00 0.00 2.57
2982 3434 6.480524 TTTCACGATGAGGTCAAGTAAATG 57.519 37.500 0.00 0.00 0.00 2.32
2983 3435 7.504924 TTTTTCACGATGAGGTCAAGTAAAT 57.495 32.000 0.00 0.00 0.00 1.40
2984 3436 6.928979 TTTTTCACGATGAGGTCAAGTAAA 57.071 33.333 0.00 0.00 0.00 2.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.