Multiple sequence alignment - TraesCS6A01G068400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G068400 chr6A 100.000 8545 0 0 1 8545 36915644 36924188 0.000000e+00 15780
1 TraesCS6A01G068400 chr6A 93.145 671 39 2 7881 8544 550735763 550735093 0.000000e+00 977
2 TraesCS6A01G068400 chr6B 91.993 2835 169 26 3211 6014 68243104 68245911 0.000000e+00 3925
3 TraesCS6A01G068400 chr6B 91.747 1660 77 28 6031 7666 68245896 68247519 0.000000e+00 2252
4 TraesCS6A01G068400 chr6B 80.931 2407 171 116 177 2409 68239716 68242008 0.000000e+00 1637
5 TraesCS6A01G068400 chr6B 83.051 295 21 11 2810 3103 68242694 68242960 3.080000e-59 241
6 TraesCS6A01G068400 chr6D 93.483 2455 116 17 3588 6014 32444796 32447234 0.000000e+00 3607
7 TraesCS6A01G068400 chr6D 82.371 3273 226 153 1 3109 32441260 32444345 0.000000e+00 2523
8 TraesCS6A01G068400 chr6D 88.883 1781 117 36 6031 7779 32447219 32448950 0.000000e+00 2117
9 TraesCS6A01G068400 chr6D 86.012 336 24 7 3160 3473 32444432 32444766 1.060000e-88 339
10 TraesCS6A01G068400 chr3A 95.796 666 28 0 7880 8545 61304539 61303874 0.000000e+00 1075
11 TraesCS6A01G068400 chr3A 93.985 665 39 1 7881 8545 411247528 411248191 0.000000e+00 1005
12 TraesCS6A01G068400 chr3A 90.476 84 7 1 7778 7860 61304679 61304596 9.070000e-20 110
13 TraesCS6A01G068400 chr7A 95.789 665 28 0 7881 8545 723282925 723282261 0.000000e+00 1074
14 TraesCS6A01G068400 chr7A 80.000 630 93 18 4130 4749 200616291 200615685 1.320000e-117 435
15 TraesCS6A01G068400 chr7A 86.087 115 15 1 27 140 735133064 735133178 1.160000e-23 122
16 TraesCS6A01G068400 chr3D 94.337 671 31 2 7881 8544 2397756 2397086 0.000000e+00 1022
17 TraesCS6A01G068400 chr3D 93.601 672 35 3 7881 8544 489643339 489644010 0.000000e+00 996
18 TraesCS6A01G068400 chr5D 93.443 671 36 6 7881 8544 515633577 515634246 0.000000e+00 989
19 TraesCS6A01G068400 chrUn 93.145 671 37 5 7881 8544 395978736 395978068 0.000000e+00 976
20 TraesCS6A01G068400 chr2A 93.145 671 37 4 7881 8543 681248507 681249176 0.000000e+00 976
21 TraesCS6A01G068400 chr4A 80.253 633 86 22 4130 4749 690222381 690222987 2.830000e-119 440
22 TraesCS6A01G068400 chr1A 79.392 296 35 13 4690 4978 477054232 477054508 1.460000e-42 185
23 TraesCS6A01G068400 chr2B 79.443 287 35 10 4697 4978 309474675 309474408 1.890000e-41 182
24 TraesCS6A01G068400 chr2B 81.905 210 30 7 4142 4350 309474981 309474779 4.100000e-38 171
25 TraesCS6A01G068400 chr4D 84.892 139 21 0 4 142 455430243 455430105 3.220000e-29 141
26 TraesCS6A01G068400 chr3B 85.938 128 16 2 12 139 76432201 76432326 1.500000e-27 135
27 TraesCS6A01G068400 chr2D 89.286 84 9 0 7777 7860 305756802 305756719 1.170000e-18 106


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G068400 chr6A 36915644 36924188 8544 False 15780.00 15780 100.00000 1 8545 1 chr6A.!!$F1 8544
1 TraesCS6A01G068400 chr6A 550735093 550735763 670 True 977.00 977 93.14500 7881 8544 1 chr6A.!!$R1 663
2 TraesCS6A01G068400 chr6B 68239716 68247519 7803 False 2013.75 3925 86.93050 177 7666 4 chr6B.!!$F1 7489
3 TraesCS6A01G068400 chr6D 32441260 32448950 7690 False 2146.50 3607 87.68725 1 7779 4 chr6D.!!$F1 7778
4 TraesCS6A01G068400 chr3A 411247528 411248191 663 False 1005.00 1005 93.98500 7881 8545 1 chr3A.!!$F1 664
5 TraesCS6A01G068400 chr3A 61303874 61304679 805 True 592.50 1075 93.13600 7778 8545 2 chr3A.!!$R1 767
6 TraesCS6A01G068400 chr7A 723282261 723282925 664 True 1074.00 1074 95.78900 7881 8545 1 chr7A.!!$R2 664
7 TraesCS6A01G068400 chr7A 200615685 200616291 606 True 435.00 435 80.00000 4130 4749 1 chr7A.!!$R1 619
8 TraesCS6A01G068400 chr3D 2397086 2397756 670 True 1022.00 1022 94.33700 7881 8544 1 chr3D.!!$R1 663
9 TraesCS6A01G068400 chr3D 489643339 489644010 671 False 996.00 996 93.60100 7881 8544 1 chr3D.!!$F1 663
10 TraesCS6A01G068400 chr5D 515633577 515634246 669 False 989.00 989 93.44300 7881 8544 1 chr5D.!!$F1 663
11 TraesCS6A01G068400 chrUn 395978068 395978736 668 True 976.00 976 93.14500 7881 8544 1 chrUn.!!$R1 663
12 TraesCS6A01G068400 chr2A 681248507 681249176 669 False 976.00 976 93.14500 7881 8543 1 chr2A.!!$F1 662
13 TraesCS6A01G068400 chr4A 690222381 690222987 606 False 440.00 440 80.25300 4130 4749 1 chr4A.!!$F1 619

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
542 593 0.041238 TGGAGTAGACTGGACAGGGG 59.959 60.0 4.14 0.0 0.00 4.79 F
1162 1311 0.040067 CTCCGTGTTTTCCAGCTTGC 60.040 55.0 0.00 0.0 0.00 4.01 F
1632 1829 0.037734 TCCTTTTCTCCGCCTTTCCC 59.962 55.0 0.00 0.0 0.00 3.97 F
2318 2599 0.101040 CTCTGCTGCTTCCTCTCTCG 59.899 60.0 0.00 0.0 0.00 4.04 F
2772 3323 0.111061 AATGGAACTCAGCCTGCACA 59.889 50.0 0.00 0.0 0.00 4.57 F
2773 3324 0.111061 ATGGAACTCAGCCTGCACAA 59.889 50.0 0.00 0.0 0.00 3.33 F
3105 3682 0.313672 GCAACAGAAATTGGCCGTCA 59.686 50.0 0.00 0.0 0.00 4.35 F
4121 4799 0.322816 TCCACTCATTTGCCTCCTGC 60.323 55.0 0.00 0.0 41.77 4.85 F
5140 5857 0.250727 TGGAACCAACTGCTACTGCC 60.251 55.0 0.00 0.0 38.71 4.85 F
5306 6023 0.176449 GGGAATTGCCTCATGGTTGC 59.824 55.0 9.06 0.0 36.66 4.17 F
6330 7055 0.179073 ATCGCCCAGGAAAGATCACG 60.179 55.0 0.00 0.0 0.00 4.35 F
6702 7430 0.901827 TTCGCATCTCCCTTGTAGCA 59.098 50.0 0.00 0.0 0.00 3.49 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1418 1582 0.031111 TCCATCCATCGACCCCTTCT 60.031 55.000 0.00 0.0 0.00 2.85 R
2753 3034 0.111061 TGTGCAGGCTGAGTTCCATT 59.889 50.000 20.86 0.0 0.00 3.16 R
2969 3542 0.461135 AGCCACAAACAAAGCCACAG 59.539 50.000 0.00 0.0 0.00 3.66 R
3153 3730 0.472471 AACTCTCAAAGGACGGCCAA 59.528 50.000 11.69 0.0 36.29 4.52 R
3934 4611 0.530288 GTCAGTGAGGAGAGGACTGC 59.470 60.000 0.00 0.0 37.59 4.40 R
3936 4613 0.780637 TGGTCAGTGAGGAGAGGACT 59.219 55.000 0.00 0.0 0.00 3.85 R
4769 5486 1.069296 TGAAAGAATTTGACGGCTGCG 60.069 47.619 0.00 0.0 39.27 5.18 R
5303 6020 0.611714 GGTAAGAGAACCGAGGGCAA 59.388 55.000 0.00 0.0 0.00 4.52 R
6970 7727 0.392060 TACTGCCACATCTGCTGCTG 60.392 55.000 0.00 0.0 0.00 4.41 R
7221 7981 0.178950 TCACTCTCTCACTGGCCAGT 60.179 55.000 33.20 33.2 43.61 4.00 R
7225 7985 0.246086 CACCTCACTCTCTCACTGGC 59.754 60.000 0.00 0.0 0.00 4.85 R
8412 9225 0.606401 ATGTGCACTTGCGGTAGCTT 60.606 50.000 19.41 0.0 45.83 3.74 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 0.548510 AACATGCTCCCTCTTAGCCC 59.451 55.000 0.00 0.00 39.30 5.19
28 29 1.419381 CTCCCTCTTAGCCCCTCTTC 58.581 60.000 0.00 0.00 0.00 2.87
39 40 2.503356 AGCCCCTCTTCTCACATTGTAG 59.497 50.000 0.00 0.00 0.00 2.74
85 86 9.513906 TCTGACCATTACTTAATCAAATCAACA 57.486 29.630 0.00 0.00 0.00 3.33
89 90 8.462016 ACCATTACTTAATCAAATCAACAGCTC 58.538 33.333 0.00 0.00 0.00 4.09
91 92 9.499585 CATTACTTAATCAAATCAACAGCTCAG 57.500 33.333 0.00 0.00 0.00 3.35
99 100 7.549615 TCAAATCAACAGCTCAGATCTATTG 57.450 36.000 0.00 0.00 0.00 1.90
100 101 7.108194 TCAAATCAACAGCTCAGATCTATTGT 58.892 34.615 0.00 0.00 0.00 2.71
101 102 8.260114 TCAAATCAACAGCTCAGATCTATTGTA 58.740 33.333 0.00 0.00 0.00 2.41
105 106 7.615403 TCAACAGCTCAGATCTATTGTAAACT 58.385 34.615 0.00 0.00 0.00 2.66
106 107 8.097038 TCAACAGCTCAGATCTATTGTAAACTT 58.903 33.333 0.00 0.00 0.00 2.66
127 128 6.522054 ACTTTTATCTCTCGTGTGAAAAGGA 58.478 36.000 13.75 0.00 32.17 3.36
128 129 6.990349 ACTTTTATCTCTCGTGTGAAAAGGAA 59.010 34.615 13.75 0.09 32.17 3.36
134 135 5.026038 TCTCGTGTGAAAAGGAAAGGTAA 57.974 39.130 0.00 0.00 0.00 2.85
139 140 5.374071 GTGTGAAAAGGAAAGGTAAGAGGA 58.626 41.667 0.00 0.00 0.00 3.71
144 145 2.563406 AGGAAAGGTAAGAGGAAGGGG 58.437 52.381 0.00 0.00 0.00 4.79
145 146 2.115605 AGGAAAGGTAAGAGGAAGGGGA 59.884 50.000 0.00 0.00 0.00 4.81
147 148 2.272074 AAGGTAAGAGGAAGGGGAGG 57.728 55.000 0.00 0.00 0.00 4.30
148 149 0.326713 AGGTAAGAGGAAGGGGAGGC 60.327 60.000 0.00 0.00 0.00 4.70
151 152 0.326618 TAAGAGGAAGGGGAGGCAGG 60.327 60.000 0.00 0.00 0.00 4.85
152 153 2.041265 GAGGAAGGGGAGGCAGGA 59.959 66.667 0.00 0.00 0.00 3.86
155 156 3.093172 GAAGGGGAGGCAGGAGGG 61.093 72.222 0.00 0.00 0.00 4.30
156 157 3.626596 AAGGGGAGGCAGGAGGGA 61.627 66.667 0.00 0.00 0.00 4.20
157 158 3.649652 AAGGGGAGGCAGGAGGGAG 62.650 68.421 0.00 0.00 0.00 4.30
209 210 3.303938 TGACAGGAATTTTGCTTCCCAA 58.696 40.909 0.00 0.00 44.93 4.12
220 221 2.733956 TGCTTCCCAACAGTTTTGTCT 58.266 42.857 0.00 0.00 36.23 3.41
233 234 5.694458 ACAGTTTTGTCTTGTTTGTTTCACC 59.306 36.000 0.00 0.00 29.46 4.02
237 238 6.827586 TTTGTCTTGTTTGTTTCACCTAGT 57.172 33.333 0.00 0.00 0.00 2.57
245 247 3.552132 TGTTTCACCTAGTGTGCTTCA 57.448 42.857 6.51 3.66 45.03 3.02
281 285 4.992951 ACGAACTTGTTACTACAATGTCCC 59.007 41.667 0.00 0.00 43.02 4.46
306 312 4.545610 GTCTGAGTTTCTGACTGACTGAG 58.454 47.826 8.33 0.00 40.69 3.35
352 370 1.950954 GCGGAGGAAAGGAAAGGAAGG 60.951 57.143 0.00 0.00 0.00 3.46
361 379 1.133976 AGGAAAGGAAGGCCATCATCG 60.134 52.381 10.67 0.00 36.29 3.84
363 381 1.672881 GAAAGGAAGGCCATCATCGTG 59.327 52.381 10.67 0.00 36.29 4.35
369 387 0.250209 AGGCCATCATCGTGATCTGC 60.250 55.000 5.01 8.94 34.28 4.26
370 388 0.533531 GGCCATCATCGTGATCTGCA 60.534 55.000 0.00 0.00 34.28 4.41
376 394 1.066645 TCATCGTGATCTGCACTGCTT 60.067 47.619 1.98 0.00 45.49 3.91
390 408 3.047877 GCTTGCCCGTACGCAGTT 61.048 61.111 10.49 0.00 37.78 3.16
392 413 1.693083 GCTTGCCCGTACGCAGTTAG 61.693 60.000 10.49 4.16 37.78 2.34
396 417 0.525029 GCCCGTACGCAGTTAGACTC 60.525 60.000 10.49 0.00 37.78 3.36
397 418 1.093159 CCCGTACGCAGTTAGACTCT 58.907 55.000 10.49 0.00 37.78 3.24
398 419 1.202154 CCCGTACGCAGTTAGACTCTG 60.202 57.143 10.49 0.00 37.78 3.35
418 462 2.543848 TGACTTGAATTGCCGATATCGC 59.456 45.455 19.78 14.85 38.18 4.58
468 515 4.328440 CGAGCAATAGAAAGTCTTCACCAG 59.672 45.833 0.00 0.00 33.64 4.00
490 537 1.970114 CACCCACAAGAGGCTGCAG 60.970 63.158 10.11 10.11 0.00 4.41
506 557 1.330655 GCAGCCTGTAGCCAGTAGGA 61.331 60.000 0.00 0.00 45.47 2.94
524 575 2.308866 AGGAGTGTTTAAGTGGGGGATG 59.691 50.000 0.00 0.00 0.00 3.51
527 578 2.308866 AGTGTTTAAGTGGGGGATGGAG 59.691 50.000 0.00 0.00 0.00 3.86
529 580 3.264964 GTGTTTAAGTGGGGGATGGAGTA 59.735 47.826 0.00 0.00 0.00 2.59
541 592 2.035632 GATGGAGTAGACTGGACAGGG 58.964 57.143 4.14 0.00 0.00 4.45
542 593 0.041238 TGGAGTAGACTGGACAGGGG 59.959 60.000 4.14 0.00 0.00 4.79
547 598 1.886730 TAGACTGGACAGGGGAGGGG 61.887 65.000 4.14 0.00 0.00 4.79
625 711 1.006998 ACATGTGAGGAGAGAGAGCCT 59.993 52.381 0.00 0.00 37.18 4.58
645 731 5.708230 AGCCTACGAGAGAGGATTTATAGTG 59.292 44.000 0.00 0.00 35.99 2.74
646 732 5.706369 GCCTACGAGAGAGGATTTATAGTGA 59.294 44.000 0.00 0.00 35.99 3.41
647 733 6.128117 GCCTACGAGAGAGGATTTATAGTGAG 60.128 46.154 0.00 0.00 35.99 3.51
648 734 6.373216 CCTACGAGAGAGGATTTATAGTGAGG 59.627 46.154 0.00 0.00 35.99 3.86
649 735 5.074115 ACGAGAGAGGATTTATAGTGAGGG 58.926 45.833 0.00 0.00 0.00 4.30
650 736 4.461081 CGAGAGAGGATTTATAGTGAGGGG 59.539 50.000 0.00 0.00 0.00 4.79
651 737 4.757692 AGAGAGGATTTATAGTGAGGGGG 58.242 47.826 0.00 0.00 0.00 5.40
652 738 4.423960 AGAGAGGATTTATAGTGAGGGGGA 59.576 45.833 0.00 0.00 0.00 4.81
653 739 4.757692 AGAGGATTTATAGTGAGGGGGAG 58.242 47.826 0.00 0.00 0.00 4.30
654 740 3.841255 GAGGATTTATAGTGAGGGGGAGG 59.159 52.174 0.00 0.00 0.00 4.30
655 741 2.913617 GGATTTATAGTGAGGGGGAGGG 59.086 54.545 0.00 0.00 0.00 4.30
656 742 2.507478 TTTATAGTGAGGGGGAGGGG 57.493 55.000 0.00 0.00 0.00 4.79
691 777 4.767255 CGCAGGCCAGTCCAGTCC 62.767 72.222 5.01 0.00 37.29 3.85
692 778 3.640407 GCAGGCCAGTCCAGTCCA 61.640 66.667 5.01 0.00 37.29 4.02
693 779 2.667418 CAGGCCAGTCCAGTCCAG 59.333 66.667 5.01 0.00 37.29 3.86
694 780 2.205462 AGGCCAGTCCAGTCCAGT 59.795 61.111 5.01 0.00 37.29 4.00
695 781 1.915769 AGGCCAGTCCAGTCCAGTC 60.916 63.158 5.01 0.00 37.29 3.51
696 782 2.665603 GCCAGTCCAGTCCAGTCC 59.334 66.667 0.00 0.00 0.00 3.85
697 783 2.217038 GCCAGTCCAGTCCAGTCCA 61.217 63.158 0.00 0.00 0.00 4.02
698 784 1.978473 CCAGTCCAGTCCAGTCCAG 59.022 63.158 0.00 0.00 0.00 3.86
699 785 0.833834 CCAGTCCAGTCCAGTCCAGT 60.834 60.000 0.00 0.00 0.00 4.00
700 786 0.605589 CAGTCCAGTCCAGTCCAGTC 59.394 60.000 0.00 0.00 0.00 3.51
701 787 0.543174 AGTCCAGTCCAGTCCAGTCC 60.543 60.000 0.00 0.00 0.00 3.85
702 788 0.832135 GTCCAGTCCAGTCCAGTCCA 60.832 60.000 0.00 0.00 0.00 4.02
703 789 0.542938 TCCAGTCCAGTCCAGTCCAG 60.543 60.000 0.00 0.00 0.00 3.86
770 857 2.745100 GAAAAGGGGCCGACGTCC 60.745 66.667 10.58 0.00 0.00 4.79
828 931 1.153745 CCACCGCTCTTCTTCCTCG 60.154 63.158 0.00 0.00 0.00 4.63
847 950 1.150536 TCCAGACAAGCAACCACCC 59.849 57.895 0.00 0.00 0.00 4.61
848 951 1.152777 CCAGACAAGCAACCACCCA 60.153 57.895 0.00 0.00 0.00 4.51
849 952 1.174712 CCAGACAAGCAACCACCCAG 61.175 60.000 0.00 0.00 0.00 4.45
853 969 0.109342 ACAAGCAACCACCCAGAGAG 59.891 55.000 0.00 0.00 0.00 3.20
863 979 2.334653 CCAGAGAGATCGCTCGCC 59.665 66.667 19.11 0.00 45.98 5.54
866 982 1.896660 AGAGAGATCGCTCGCCCTC 60.897 63.158 19.11 0.00 45.98 4.30
937 1059 4.988598 CGTTGCTGCCTCCACCGT 62.989 66.667 0.00 0.00 0.00 4.83
938 1060 3.050275 GTTGCTGCCTCCACCGTC 61.050 66.667 0.00 0.00 0.00 4.79
939 1061 4.680237 TTGCTGCCTCCACCGTCG 62.680 66.667 0.00 0.00 0.00 5.12
1058 1201 9.528018 TTGATTACTTTCTTGATTTGGTTGAAC 57.472 29.630 0.00 0.00 0.00 3.18
1080 1225 1.440938 TTGGTTCGTGTTTCCTGCGG 61.441 55.000 0.00 0.00 0.00 5.69
1096 1241 1.203313 CGGTGCGTTCCGTTTCTTC 59.797 57.895 11.17 0.00 44.77 2.87
1102 1247 1.012486 CGTTCCGTTTCTTCCCTCCG 61.012 60.000 0.00 0.00 0.00 4.63
1119 1264 0.377203 CCGCTTAATCCGTGCCTTTC 59.623 55.000 0.00 0.00 0.00 2.62
1139 1284 1.198608 CCGTCGATTCTCGCCGTTAC 61.199 60.000 0.00 0.00 39.77 2.50
1162 1311 0.040067 CTCCGTGTTTTCCAGCTTGC 60.040 55.000 0.00 0.00 0.00 4.01
1165 1314 0.594796 CGTGTTTTCCAGCTTGCCAC 60.595 55.000 0.00 0.00 0.00 5.01
1178 1327 2.159057 GCTTGCCACCATTAATTCAGGG 60.159 50.000 0.00 0.00 0.00 4.45
1194 1343 3.574780 GGTAAACCCTGCGTGCTC 58.425 61.111 0.00 0.00 0.00 4.26
1197 1346 0.602905 GTAAACCCTGCGTGCTCTGT 60.603 55.000 0.00 0.00 0.00 3.41
1200 1349 2.281070 CCCTGCGTGCTCTGTGTT 60.281 61.111 0.00 0.00 0.00 3.32
1201 1350 1.893808 CCCTGCGTGCTCTGTGTTT 60.894 57.895 0.00 0.00 0.00 2.83
1202 1351 1.447317 CCCTGCGTGCTCTGTGTTTT 61.447 55.000 0.00 0.00 0.00 2.43
1203 1352 0.040958 CCTGCGTGCTCTGTGTTTTC 60.041 55.000 0.00 0.00 0.00 2.29
1204 1353 0.040958 CTGCGTGCTCTGTGTTTTCC 60.041 55.000 0.00 0.00 0.00 3.13
1208 1362 1.872952 CGTGCTCTGTGTTTTCCATCA 59.127 47.619 0.00 0.00 0.00 3.07
1215 1369 3.507233 TCTGTGTTTTCCATCAAGCATCC 59.493 43.478 0.00 0.00 0.00 3.51
1217 1371 3.833650 TGTGTTTTCCATCAAGCATCCAT 59.166 39.130 0.00 0.00 0.00 3.41
1220 1374 3.385314 TTTCCATCAAGCATCCATCCA 57.615 42.857 0.00 0.00 0.00 3.41
1226 1380 3.150458 TCAAGCATCCATCCATCCATC 57.850 47.619 0.00 0.00 0.00 3.51
1227 1381 2.168496 CAAGCATCCATCCATCCATCC 58.832 52.381 0.00 0.00 0.00 3.51
1228 1382 1.452540 AGCATCCATCCATCCATCCA 58.547 50.000 0.00 0.00 0.00 3.41
1229 1383 2.000803 AGCATCCATCCATCCATCCAT 58.999 47.619 0.00 0.00 0.00 3.41
1231 1385 2.949054 GCATCCATCCATCCATCCATCC 60.949 54.545 0.00 0.00 0.00 3.51
1233 1387 1.706866 TCCATCCATCCATCCATCCAC 59.293 52.381 0.00 0.00 0.00 4.02
1234 1388 1.612462 CCATCCATCCATCCATCCACG 60.612 57.143 0.00 0.00 0.00 4.94
1235 1389 0.694771 ATCCATCCATCCATCCACGG 59.305 55.000 0.00 0.00 0.00 4.94
1236 1390 1.601759 CCATCCATCCATCCACGGC 60.602 63.158 0.00 0.00 0.00 5.68
1237 1391 1.601759 CATCCATCCATCCACGGCC 60.602 63.158 0.00 0.00 0.00 6.13
1238 1392 2.078044 ATCCATCCATCCACGGCCA 61.078 57.895 2.24 0.00 0.00 5.36
1242 1396 2.982643 ATCCATCCACGGCCAAGCA 61.983 57.895 2.24 0.00 0.00 3.91
1266 1420 2.022902 CCCGTCGACGTCTCATCG 59.977 66.667 33.49 17.67 41.00 3.84
1267 1421 2.648102 CCGTCGACGTCTCATCGC 60.648 66.667 33.49 0.00 39.46 4.58
1268 1422 2.648102 CGTCGACGTCTCATCGCC 60.648 66.667 29.08 0.00 39.46 5.54
1269 1423 2.648102 GTCGACGTCTCATCGCCG 60.648 66.667 14.70 0.00 39.46 6.46
1270 1424 4.531912 TCGACGTCTCATCGCCGC 62.532 66.667 14.70 0.00 39.46 6.53
1291 1445 0.463833 CCGCATTTCCCCCACTACTC 60.464 60.000 0.00 0.00 0.00 2.59
1303 1457 2.489971 CCACTACTCGCTTCCAAAACA 58.510 47.619 0.00 0.00 0.00 2.83
1312 1466 2.498167 GCTTCCAAAACAGAGCAGAGA 58.502 47.619 0.00 0.00 35.29 3.10
1318 1478 3.192212 CCAAAACAGAGCAGAGATTTCCC 59.808 47.826 0.00 0.00 0.00 3.97
1319 1479 2.393271 AACAGAGCAGAGATTTCCCG 57.607 50.000 0.00 0.00 0.00 5.14
1397 1561 3.873361 TGAGCAGAGATTTCCGCATTAAG 59.127 43.478 0.00 0.00 0.00 1.85
1418 1582 2.621998 GTCGGATCTGGACGGATAAAGA 59.378 50.000 0.62 0.00 0.00 2.52
1425 1589 2.103263 CTGGACGGATAAAGAGAAGGGG 59.897 54.545 0.00 0.00 0.00 4.79
1426 1590 2.117051 GGACGGATAAAGAGAAGGGGT 58.883 52.381 0.00 0.00 0.00 4.95
1427 1591 2.102757 GGACGGATAAAGAGAAGGGGTC 59.897 54.545 0.00 0.00 0.00 4.46
1428 1592 1.755380 ACGGATAAAGAGAAGGGGTCG 59.245 52.381 0.00 0.00 0.00 4.79
1431 1595 3.553096 CGGATAAAGAGAAGGGGTCGATG 60.553 52.174 0.00 0.00 0.00 3.84
1491 1659 4.133078 GCCACCATATTCCTCTCTCTTTG 58.867 47.826 0.00 0.00 0.00 2.77
1492 1660 4.133078 CCACCATATTCCTCTCTCTTTGC 58.867 47.826 0.00 0.00 0.00 3.68
1495 1663 5.884792 CACCATATTCCTCTCTCTTTGCTTT 59.115 40.000 0.00 0.00 0.00 3.51
1496 1664 6.038050 CACCATATTCCTCTCTCTTTGCTTTC 59.962 42.308 0.00 0.00 0.00 2.62
1497 1665 6.069731 ACCATATTCCTCTCTCTTTGCTTTCT 60.070 38.462 0.00 0.00 0.00 2.52
1498 1666 6.827762 CCATATTCCTCTCTCTTTGCTTTCTT 59.172 38.462 0.00 0.00 0.00 2.52
1499 1667 7.338957 CCATATTCCTCTCTCTTTGCTTTCTTT 59.661 37.037 0.00 0.00 0.00 2.52
1500 1668 6.816134 ATTCCTCTCTCTTTGCTTTCTTTC 57.184 37.500 0.00 0.00 0.00 2.62
1501 1669 5.559148 TCCTCTCTCTTTGCTTTCTTTCT 57.441 39.130 0.00 0.00 0.00 2.52
1502 1670 5.303971 TCCTCTCTCTTTGCTTTCTTTCTG 58.696 41.667 0.00 0.00 0.00 3.02
1503 1671 4.455190 CCTCTCTCTTTGCTTTCTTTCTGG 59.545 45.833 0.00 0.00 0.00 3.86
1504 1672 4.392940 TCTCTCTTTGCTTTCTTTCTGGG 58.607 43.478 0.00 0.00 0.00 4.45
1505 1673 4.103153 TCTCTCTTTGCTTTCTTTCTGGGA 59.897 41.667 0.00 0.00 0.00 4.37
1545 1713 7.015001 GCTAAAGAAAAGATCCATCCAATCCAT 59.985 37.037 0.00 0.00 0.00 3.41
1546 1714 6.973460 AAGAAAAGATCCATCCAATCCATC 57.027 37.500 0.00 0.00 0.00 3.51
1547 1715 5.392125 AGAAAAGATCCATCCAATCCATCC 58.608 41.667 0.00 0.00 0.00 3.51
1548 1716 4.819702 AAAGATCCATCCAATCCATCCA 57.180 40.909 0.00 0.00 0.00 3.41
1549 1717 4.819702 AAGATCCATCCAATCCATCCAA 57.180 40.909 0.00 0.00 0.00 3.53
1550 1718 5.349738 AAGATCCATCCAATCCATCCAAT 57.650 39.130 0.00 0.00 0.00 3.16
1551 1719 4.931914 AGATCCATCCAATCCATCCAATC 58.068 43.478 0.00 0.00 0.00 2.67
1552 1720 3.530928 TCCATCCAATCCATCCAATCC 57.469 47.619 0.00 0.00 0.00 3.01
1553 1721 2.790585 TCCATCCAATCCATCCAATCCA 59.209 45.455 0.00 0.00 0.00 3.41
1554 1722 3.207093 TCCATCCAATCCATCCAATCCAA 59.793 43.478 0.00 0.00 0.00 3.53
1555 1723 4.140639 TCCATCCAATCCATCCAATCCAAT 60.141 41.667 0.00 0.00 0.00 3.16
1556 1724 4.222145 CCATCCAATCCATCCAATCCAATC 59.778 45.833 0.00 0.00 0.00 2.67
1557 1725 3.848303 TCCAATCCATCCAATCCAATCC 58.152 45.455 0.00 0.00 0.00 3.01
1558 1726 3.207093 TCCAATCCATCCAATCCAATCCA 59.793 43.478 0.00 0.00 0.00 3.41
1596 1764 2.774439 TCGTTTTCAGGCAAGAAAGC 57.226 45.000 8.50 8.50 38.60 3.51
1607 1775 2.095053 GGCAAGAAAGCGAGTGAGAATC 59.905 50.000 0.00 0.00 34.64 2.52
1632 1829 0.037734 TCCTTTTCTCCGCCTTTCCC 59.962 55.000 0.00 0.00 0.00 3.97
1654 1863 2.792947 ATCCGATCCCCCGTTCGTG 61.793 63.158 0.00 0.00 33.60 4.35
1673 1882 2.633860 CTCACAGGAGCAACCAACC 58.366 57.895 2.96 0.00 42.04 3.77
1674 1883 0.179020 CTCACAGGAGCAACCAACCA 60.179 55.000 2.96 0.00 42.04 3.67
1675 1884 0.179020 TCACAGGAGCAACCAACCAG 60.179 55.000 2.96 0.00 42.04 4.00
1676 1885 1.529244 ACAGGAGCAACCAACCAGC 60.529 57.895 2.96 0.00 42.04 4.85
1677 1886 2.281761 AGGAGCAACCAACCAGCG 60.282 61.111 2.96 0.00 42.04 5.18
1678 1887 2.281484 GGAGCAACCAACCAGCGA 60.281 61.111 0.00 0.00 38.79 4.93
1679 1888 2.328099 GGAGCAACCAACCAGCGAG 61.328 63.158 0.00 0.00 38.79 5.03
1683 1892 2.192861 CAACCAACCAGCGAGGCAA 61.193 57.895 0.00 0.00 43.14 4.52
1685 1894 2.032528 CCAACCAGCGAGGCAAGA 59.967 61.111 0.00 0.00 43.14 3.02
1694 1903 2.451167 CGAGGCAAGAAGCTCGCTG 61.451 63.158 0.00 0.00 44.79 5.18
1711 1920 1.948144 GCTGGCTCACTCCTTTTCTCC 60.948 57.143 0.00 0.00 0.00 3.71
1716 1925 3.333804 GCTCACTCCTTTTCTCCTCTTG 58.666 50.000 0.00 0.00 0.00 3.02
1751 1964 2.425143 TCCCTGATGTTGCTTCCATC 57.575 50.000 0.00 0.00 39.32 3.51
1764 1977 3.264897 CCATCGTACCGCTGCTGC 61.265 66.667 5.34 5.34 0.00 5.25
1765 1978 2.202797 CATCGTACCGCTGCTGCT 60.203 61.111 14.03 0.00 36.97 4.24
1766 1979 2.202797 ATCGTACCGCTGCTGCTG 60.203 61.111 14.03 9.72 36.97 4.41
1767 1980 2.710902 ATCGTACCGCTGCTGCTGA 61.711 57.895 13.70 4.29 36.97 4.26
1769 1982 2.815647 GTACCGCTGCTGCTGACC 60.816 66.667 13.70 0.30 36.97 4.02
1770 1983 2.997315 TACCGCTGCTGCTGACCT 60.997 61.111 13.70 0.00 36.97 3.85
1776 1989 1.673665 CTGCTGCTGACCTTGGGAC 60.674 63.158 0.00 0.00 0.00 4.46
1799 2012 0.836400 TGTCTCCTTGTCCCAGTCCC 60.836 60.000 0.00 0.00 0.00 4.46
1803 2036 2.046892 CTTGTCCCAGTCCCGCAG 60.047 66.667 0.00 0.00 0.00 5.18
1821 2054 1.399440 CAGCACTACTACGGCGACTAA 59.601 52.381 16.62 0.00 0.00 2.24
1869 2106 2.666317 GCCCATGCCCACTTTATTACT 58.334 47.619 0.00 0.00 0.00 2.24
1870 2107 3.827722 GCCCATGCCCACTTTATTACTA 58.172 45.455 0.00 0.00 0.00 1.82
1874 2111 5.940470 CCCATGCCCACTTTATTACTATCTC 59.060 44.000 0.00 0.00 0.00 2.75
1877 2114 7.445121 CATGCCCACTTTATTACTATCTCTCA 58.555 38.462 0.00 0.00 0.00 3.27
1879 2116 6.611642 TGCCCACTTTATTACTATCTCTCACT 59.388 38.462 0.00 0.00 0.00 3.41
1881 2118 7.201920 GCCCACTTTATTACTATCTCTCACTCA 60.202 40.741 0.00 0.00 0.00 3.41
1895 2132 6.467677 TCTCTCACTCACCCATAAAGAAAAG 58.532 40.000 0.00 0.00 0.00 2.27
1949 2190 2.108425 CCCTCCTTATTAAAGAGCCCCC 59.892 54.545 0.00 0.00 34.37 5.40
1983 2227 1.934463 CATGCTAATGGACGGACGC 59.066 57.895 0.00 0.00 0.00 5.19
1984 2228 0.809636 CATGCTAATGGACGGACGCA 60.810 55.000 0.00 0.00 0.00 5.24
1985 2229 0.106708 ATGCTAATGGACGGACGCAT 59.893 50.000 0.00 0.00 33.67 4.73
1986 2230 0.107897 TGCTAATGGACGGACGCATT 60.108 50.000 0.00 0.00 0.00 3.56
1988 2232 0.937304 CTAATGGACGGACGCATTGG 59.063 55.000 7.50 2.34 0.00 3.16
1995 2247 4.101790 GGACGCATTGGCCGTGTG 62.102 66.667 17.14 17.14 36.38 3.82
2028 2280 5.130350 AGAGAGAAAGAGGATTCGTAGGAG 58.870 45.833 0.00 0.00 34.46 3.69
2064 2316 1.000843 GCTTTTTGGATGGTGGTGGAC 59.999 52.381 0.00 0.00 0.00 4.02
2156 2408 3.894947 GAGCGGCTCCTCGTCCTC 61.895 72.222 19.20 0.00 0.00 3.71
2221 2484 1.000163 CTGGTACGTGTTCTGCTCTGT 60.000 52.381 0.00 0.00 0.00 3.41
2224 2487 2.545113 GGTACGTGTTCTGCTCTGTTCA 60.545 50.000 0.00 0.00 0.00 3.18
2242 2505 2.106566 TCACAGCTTCCTCTCTCATCC 58.893 52.381 0.00 0.00 0.00 3.51
2245 2508 1.836166 CAGCTTCCTCTCTCATCCCAA 59.164 52.381 0.00 0.00 0.00 4.12
2246 2509 2.438763 CAGCTTCCTCTCTCATCCCAAT 59.561 50.000 0.00 0.00 0.00 3.16
2247 2510 2.438763 AGCTTCCTCTCTCATCCCAATG 59.561 50.000 0.00 0.00 0.00 2.82
2248 2511 2.486907 GCTTCCTCTCTCATCCCAATGG 60.487 54.545 0.00 0.00 33.42 3.16
2249 2512 1.135094 TCCTCTCTCATCCCAATGGC 58.865 55.000 0.00 0.00 33.42 4.40
2252 2515 2.333069 CTCTCTCATCCCAATGGCCTA 58.667 52.381 3.32 0.00 33.42 3.93
2286 2567 6.689663 ATCAGATCAGATCAGATGATGGTT 57.310 37.500 15.67 0.00 37.52 3.67
2310 2591 2.615912 AGTGAACAAACTCTGCTGCTTC 59.384 45.455 0.00 0.00 0.00 3.86
2318 2599 0.101040 CTCTGCTGCTTCCTCTCTCG 59.899 60.000 0.00 0.00 0.00 4.04
2371 2652 5.306678 CCCCTATAAACAGCAATCTCTCTCT 59.693 44.000 0.00 0.00 0.00 3.10
2372 2653 6.454795 CCCTATAAACAGCAATCTCTCTCTC 58.545 44.000 0.00 0.00 0.00 3.20
2373 2654 6.267471 CCCTATAAACAGCAATCTCTCTCTCT 59.733 42.308 0.00 0.00 0.00 3.10
2374 2655 7.370383 CCTATAAACAGCAATCTCTCTCTCTC 58.630 42.308 0.00 0.00 0.00 3.20
2375 2656 7.231317 CCTATAAACAGCAATCTCTCTCTCTCT 59.769 40.741 0.00 0.00 0.00 3.10
2376 2657 9.283768 CTATAAACAGCAATCTCTCTCTCTCTA 57.716 37.037 0.00 0.00 0.00 2.43
2387 2668 7.295322 TCTCTCTCTCTCTATCTCTCTCTTG 57.705 44.000 0.00 0.00 0.00 3.02
2414 2695 1.722034 TTCTTGTGCTCTCTGGAGGT 58.278 50.000 0.00 0.00 39.80 3.85
2458 2739 0.887836 CTGCTGCTGCCAGAACAGAA 60.888 55.000 13.47 0.00 41.77 3.02
2459 2740 1.168407 TGCTGCTGCCAGAACAGAAC 61.168 55.000 13.47 0.00 41.77 3.01
2462 2743 0.819259 TGCTGCCAGAACAGAACCAC 60.819 55.000 0.00 0.00 40.25 4.16
2530 2811 5.838521 TGGGAAATTAGCCTCTTTTCTTGTT 59.161 36.000 0.00 0.00 31.57 2.83
2531 2812 7.007723 TGGGAAATTAGCCTCTTTTCTTGTTA 58.992 34.615 0.00 0.00 31.57 2.41
2532 2813 7.039993 TGGGAAATTAGCCTCTTTTCTTGTTAC 60.040 37.037 0.00 0.00 31.57 2.50
2535 2816 8.691661 AAATTAGCCTCTTTTCTTGTTACAGA 57.308 30.769 0.00 0.00 0.00 3.41
2536 2817 7.913674 ATTAGCCTCTTTTCTTGTTACAGAG 57.086 36.000 0.00 0.00 0.00 3.35
2538 2819 5.546526 AGCCTCTTTTCTTGTTACAGAGAG 58.453 41.667 0.00 0.00 34.06 3.20
2539 2820 5.305644 AGCCTCTTTTCTTGTTACAGAGAGA 59.694 40.000 10.82 0.00 34.06 3.10
2541 2822 6.517529 GCCTCTTTTCTTGTTACAGAGAGAGA 60.518 42.308 17.56 13.68 37.23 3.10
2542 2823 7.610865 CCTCTTTTCTTGTTACAGAGAGAGAT 58.389 38.462 17.56 0.00 37.23 2.75
2543 2824 8.744652 CCTCTTTTCTTGTTACAGAGAGAGATA 58.255 37.037 17.56 1.88 37.23 1.98
2544 2825 9.567848 CTCTTTTCTTGTTACAGAGAGAGATAC 57.432 37.037 14.32 0.00 37.23 2.24
2545 2826 9.078990 TCTTTTCTTGTTACAGAGAGAGATACA 57.921 33.333 0.00 0.00 0.00 2.29
2546 2827 9.352784 CTTTTCTTGTTACAGAGAGAGATACAG 57.647 37.037 0.00 0.00 0.00 2.74
2547 2828 8.637196 TTTCTTGTTACAGAGAGAGATACAGA 57.363 34.615 0.00 0.00 0.00 3.41
2548 2829 7.857734 TCTTGTTACAGAGAGAGATACAGAG 57.142 40.000 0.00 0.00 0.00 3.35
2549 2830 7.625469 TCTTGTTACAGAGAGAGATACAGAGA 58.375 38.462 0.00 0.00 0.00 3.10
2550 2831 7.768582 TCTTGTTACAGAGAGAGATACAGAGAG 59.231 40.741 0.00 0.00 0.00 3.20
2551 2832 6.353323 TGTTACAGAGAGAGATACAGAGAGG 58.647 44.000 0.00 0.00 0.00 3.69
2552 2833 3.820557 ACAGAGAGAGATACAGAGAGGC 58.179 50.000 0.00 0.00 0.00 4.70
2553 2834 3.149196 CAGAGAGAGATACAGAGAGGCC 58.851 54.545 0.00 0.00 0.00 5.19
2554 2835 2.782925 AGAGAGAGATACAGAGAGGCCA 59.217 50.000 5.01 0.00 0.00 5.36
2593 2874 5.636965 CGGAATCATTGCCTAGAACTAGATG 59.363 44.000 10.04 6.57 35.21 2.90
2637 2918 3.827898 CGGCCGGAGAGTGGAGAC 61.828 72.222 20.10 0.00 0.00 3.36
2638 2919 3.462678 GGCCGGAGAGTGGAGACC 61.463 72.222 5.05 0.00 0.00 3.85
2639 2920 2.680352 GCCGGAGAGTGGAGACCA 60.680 66.667 5.05 0.00 0.00 4.02
2665 2946 4.729918 CCACCACCAGCTCCCAGC 62.730 72.222 0.00 0.00 42.84 4.85
2668 2949 4.729918 CCACCAGCTCCCAGCACC 62.730 72.222 0.00 0.00 45.56 5.01
2669 2950 3.957586 CACCAGCTCCCAGCACCA 61.958 66.667 0.00 0.00 45.56 4.17
2670 2951 3.177884 ACCAGCTCCCAGCACCAA 61.178 61.111 0.00 0.00 45.56 3.67
2671 2952 2.360852 CCAGCTCCCAGCACCAAG 60.361 66.667 0.00 0.00 45.56 3.61
2685 2966 2.051345 CAAGCACCGAACGGCAAC 60.051 61.111 13.32 3.14 39.32 4.17
2697 2978 1.698506 ACGGCAACCAAAATTCTCCA 58.301 45.000 0.00 0.00 0.00 3.86
2702 2983 2.867647 GCAACCAAAATTCTCCACAGCC 60.868 50.000 0.00 0.00 0.00 4.85
2752 3033 1.556911 TGAGCTCCATTCTGGTTCTCC 59.443 52.381 12.15 0.00 39.03 3.71
2753 3034 1.556911 GAGCTCCATTCTGGTTCTCCA 59.443 52.381 0.87 0.00 39.03 3.86
2762 3313 3.703001 TCTGGTTCTCCAATGGAACTC 57.297 47.619 2.61 0.00 43.81 3.01
2771 3322 0.524862 CAATGGAACTCAGCCTGCAC 59.475 55.000 0.00 0.00 0.00 4.57
2772 3323 0.111061 AATGGAACTCAGCCTGCACA 59.889 50.000 0.00 0.00 0.00 4.57
2773 3324 0.111061 ATGGAACTCAGCCTGCACAA 59.889 50.000 0.00 0.00 0.00 3.33
2774 3325 0.111061 TGGAACTCAGCCTGCACAAT 59.889 50.000 0.00 0.00 0.00 2.71
2775 3326 1.251251 GGAACTCAGCCTGCACAATT 58.749 50.000 0.00 0.00 0.00 2.32
2776 3327 1.615392 GGAACTCAGCCTGCACAATTT 59.385 47.619 0.00 0.00 0.00 1.82
2789 3340 5.298777 CCTGCACAATTTCAATTTTGGGAAA 59.701 36.000 0.00 0.00 37.41 3.13
2791 3342 6.793349 TGCACAATTTCAATTTTGGGAAAAG 58.207 32.000 0.00 0.00 36.67 2.27
2841 3414 2.863740 CCAAAACTTCCGTGCCTTTTTC 59.136 45.455 0.00 0.00 0.00 2.29
2891 3464 1.860641 TTCCGATTAGGTGGAGCTCA 58.139 50.000 17.19 0.00 41.99 4.26
2892 3465 1.860641 TCCGATTAGGTGGAGCTCAA 58.139 50.000 17.19 0.00 41.99 3.02
2893 3466 1.480954 TCCGATTAGGTGGAGCTCAAC 59.519 52.381 17.19 15.22 41.99 3.18
2894 3467 1.482593 CCGATTAGGTGGAGCTCAACT 59.517 52.381 20.66 13.98 46.77 3.16
2921 3494 2.673368 CCTCCTCCGTGAAGAAATTTCG 59.327 50.000 12.42 1.05 0.00 3.46
2922 3495 3.326747 CTCCTCCGTGAAGAAATTTCGT 58.673 45.455 12.42 9.49 0.00 3.85
2926 3499 3.064207 TCCGTGAAGAAATTTCGTGGAG 58.936 45.455 11.50 5.39 0.00 3.86
2927 3500 3.064207 CCGTGAAGAAATTTCGTGGAGA 58.936 45.455 11.50 0.00 0.00 3.71
2928 3501 3.684788 CCGTGAAGAAATTTCGTGGAGAT 59.315 43.478 11.50 0.00 0.00 2.75
2929 3502 4.868171 CCGTGAAGAAATTTCGTGGAGATA 59.132 41.667 11.50 0.00 0.00 1.98
2930 3503 5.523916 CCGTGAAGAAATTTCGTGGAGATAT 59.476 40.000 11.50 0.00 0.00 1.63
2931 3504 6.292381 CCGTGAAGAAATTTCGTGGAGATATC 60.292 42.308 11.50 0.00 0.00 1.63
2932 3505 6.560433 CGTGAAGAAATTTCGTGGAGATATCG 60.560 42.308 11.50 4.38 0.00 2.92
2933 3506 6.475727 GTGAAGAAATTTCGTGGAGATATCGA 59.524 38.462 11.50 0.00 0.00 3.59
2934 3507 7.169982 GTGAAGAAATTTCGTGGAGATATCGAT 59.830 37.037 11.50 2.16 33.72 3.59
2935 3508 7.169813 TGAAGAAATTTCGTGGAGATATCGATG 59.830 37.037 11.50 0.00 33.72 3.84
2936 3509 6.516718 AGAAATTTCGTGGAGATATCGATGT 58.483 36.000 8.54 0.00 33.72 3.06
2937 3510 6.642950 AGAAATTTCGTGGAGATATCGATGTC 59.357 38.462 13.79 13.79 33.72 3.06
2988 3561 0.461135 CTGTGGCTTTGTTTGTGGCT 59.539 50.000 0.00 0.00 0.00 4.75
2992 3565 1.552337 TGGCTTTGTTTGTGGCTTTGA 59.448 42.857 0.00 0.00 0.00 2.69
3034 3607 1.518572 CATGCCGACGTGTAGGGAC 60.519 63.158 0.00 0.00 0.00 4.46
3063 3640 2.890371 CGTACCACGCTAGCCCTT 59.110 61.111 9.66 0.00 33.65 3.95
3085 3662 1.154197 CTTTCCGGTCGTCCTTTTCC 58.846 55.000 0.00 0.00 0.00 3.13
3105 3682 0.313672 GCAACAGAAATTGGCCGTCA 59.686 50.000 0.00 0.00 0.00 4.35
3163 3795 2.586648 AGAAAGAAATTGGCCGTCCT 57.413 45.000 0.00 0.00 0.00 3.85
3185 3818 5.517770 CCTTTGAGAGTTTGTTTTTCTGCTG 59.482 40.000 0.00 0.00 0.00 4.41
3268 3903 8.601845 AAAAATAGTTTGTTTTATGGGTGCTC 57.398 30.769 0.00 0.00 0.00 4.26
3384 4024 5.196788 AGTTAGGGAAACTTTCCTCCACCT 61.197 45.833 18.27 10.05 46.61 4.00
3385 4025 6.652500 AGTTAGGGAAACTTTCCTCCACCTT 61.652 44.000 18.27 0.00 46.61 3.50
3435 4093 1.419387 AGTCTTGCTGCTCTGGTCTTT 59.581 47.619 0.00 0.00 0.00 2.52
3458 4116 4.424626 TCTTCTCGATCATTTGGACTTCG 58.575 43.478 0.00 0.00 0.00 3.79
3473 4131 2.405892 CTTCGTGCCAAAGGAAGTTG 57.594 50.000 0.00 0.00 43.02 3.16
3482 4140 4.343526 TGCCAAAGGAAGTTGCAGATTTTA 59.656 37.500 0.00 0.00 0.00 1.52
3491 4149 7.277760 AGGAAGTTGCAGATTTTAACACAAAAC 59.722 33.333 0.00 0.00 0.00 2.43
3492 4150 7.277760 GGAAGTTGCAGATTTTAACACAAAACT 59.722 33.333 0.00 0.00 0.00 2.66
3493 4151 9.296400 GAAGTTGCAGATTTTAACACAAAACTA 57.704 29.630 0.00 0.00 0.00 2.24
3494 4152 9.816354 AAGTTGCAGATTTTAACACAAAACTAT 57.184 25.926 0.00 0.00 0.00 2.12
3497 4158 8.795786 TGCAGATTTTAACACAAAACTATCAC 57.204 30.769 0.00 0.00 0.00 3.06
3504 4165 9.997482 TTTTAACACAAAACTATCACAGTCTTC 57.003 29.630 0.00 0.00 36.04 2.87
3522 4183 6.765512 CAGTCTTCTGTTTCTCCTCTCTTTTT 59.234 38.462 0.00 0.00 36.97 1.94
3550 4212 2.645730 TTTGTCCTTGCAACACACAC 57.354 45.000 6.05 0.00 0.00 3.82
3561 4223 5.416862 TGCAACACACACTATACAGTTTG 57.583 39.130 0.00 0.00 38.25 2.93
3564 4226 6.018588 TGCAACACACACTATACAGTTTGTAC 60.019 38.462 0.00 0.00 42.45 2.90
3565 4227 6.018588 GCAACACACACTATACAGTTTGTACA 60.019 38.462 0.00 0.00 42.45 2.90
3566 4228 7.564128 CAACACACACTATACAGTTTGTACAG 58.436 38.462 0.00 0.00 42.45 2.74
3575 4237 7.931948 ACTATACAGTTTGTACAGCAGTTTCTT 59.068 33.333 0.00 0.00 35.42 2.52
3578 4240 6.092748 ACAGTTTGTACAGCAGTTTCTTTTG 58.907 36.000 0.00 0.00 0.00 2.44
3582 4244 7.655732 AGTTTGTACAGCAGTTTCTTTTGTTTT 59.344 29.630 0.00 0.00 0.00 2.43
3586 4262 6.272822 ACAGCAGTTTCTTTTGTTTTCTCT 57.727 33.333 0.00 0.00 0.00 3.10
3763 4440 4.651778 TGTTCCCCTCTCAACACTATTTG 58.348 43.478 0.00 0.00 0.00 2.32
3807 4484 4.241555 GGCGGGGATCACATCGCT 62.242 66.667 16.48 0.00 46.31 4.93
3887 4564 1.332290 CGACATGAACAATCATCGCGG 60.332 52.381 6.13 0.00 44.53 6.46
3958 4635 1.005332 TCCTCTCCTCACTGACCAGAG 59.995 57.143 3.76 0.00 0.00 3.35
4014 4691 1.990614 GAAGAGGCCGAGGACCCTT 60.991 63.158 0.00 0.00 0.00 3.95
4121 4799 0.322816 TCCACTCATTTGCCTCCTGC 60.323 55.000 0.00 0.00 41.77 4.85
4308 4988 7.766738 CCTTTCTCTTTCCATCTTTACCTACTC 59.233 40.741 0.00 0.00 0.00 2.59
4342 5022 4.941461 CTAGCATAGGACCATCTCTGGCC 61.941 56.522 0.00 0.00 39.72 5.36
4375 5056 6.264744 CTCAGATTTGATGATGGCTAACCAAT 59.735 38.462 0.00 0.00 40.39 3.16
4376 5057 7.734686 CTCAGATTTGATGATGGCTAACCAATG 60.735 40.741 0.00 0.00 40.39 2.82
4389 5071 1.999648 ACCAATGACAATGCTGGTGT 58.000 45.000 0.00 0.00 40.69 4.16
4527 5210 1.219646 AAGCAACAATTGGCAAAGCG 58.780 45.000 10.83 0.00 0.00 4.68
4683 5397 1.463444 GGATCGTGAAACAAGAACCGG 59.537 52.381 0.00 0.00 35.74 5.28
4715 5429 7.440556 CCATGGTATGTATCTTCTGTCTGAAAG 59.559 40.741 2.57 0.00 33.79 2.62
4769 5486 4.072131 TGCAAGTGAACTATGGGTTTCTC 58.928 43.478 0.00 0.00 38.41 2.87
4776 5493 1.153449 TATGGGTTTCTCGCAGCCG 60.153 57.895 0.00 0.00 42.07 5.52
4779 5496 2.357034 GGTTTCTCGCAGCCGTCA 60.357 61.111 0.00 0.00 35.54 4.35
4791 5508 2.574322 CAGCCGTCAAATTCTTTCACG 58.426 47.619 0.00 0.00 0.00 4.35
4806 5523 1.257743 TCACGAAGGAGGAGGAAGTG 58.742 55.000 0.00 0.00 0.00 3.16
4858 5575 2.673523 CCCCACCTTCTGAGCCAG 59.326 66.667 0.00 0.00 0.00 4.85
4868 5585 3.677284 CTGAGCCAGCAGCCGACAT 62.677 63.158 0.00 0.00 45.47 3.06
4885 5602 1.468520 ACATGGCGACGGAAAAAGATG 59.531 47.619 0.00 0.00 0.00 2.90
4886 5603 0.451783 ATGGCGACGGAAAAAGATGC 59.548 50.000 0.00 0.00 0.00 3.91
5000 5717 6.588204 AGGTTGTACAGTTTGAGTAACATGA 58.412 36.000 0.00 0.00 39.30 3.07
5052 5769 2.971330 CAGGAGCTATCAAGGAGGATGT 59.029 50.000 0.00 0.00 0.00 3.06
5077 5794 6.096141 TCAGAATAACTTTGTTGCCAACTGAA 59.904 34.615 9.30 3.29 0.00 3.02
5140 5857 0.250727 TGGAACCAACTGCTACTGCC 60.251 55.000 0.00 0.00 38.71 4.85
5165 5882 4.278419 GTGTTCCACAACTAAATCCTGCTT 59.722 41.667 0.00 0.00 34.08 3.91
5269 5986 1.695242 TCGCCAAGTCCACCTAAAGAA 59.305 47.619 0.00 0.00 0.00 2.52
5296 6013 3.517500 TGAATAAAAGGTGGGGAATTGCC 59.482 43.478 7.61 7.61 0.00 4.52
5303 6020 2.095270 TGGGGAATTGCCTCATGGT 58.905 52.632 16.31 0.00 44.19 3.55
5306 6023 0.176449 GGGAATTGCCTCATGGTTGC 59.824 55.000 9.06 0.00 36.66 4.17
5331 6048 5.069251 CCTCGGTTCTCTTACCTTGTCATAT 59.931 44.000 0.00 0.00 35.97 1.78
5333 6050 7.201884 CCTCGGTTCTCTTACCTTGTCATATTA 60.202 40.741 0.00 0.00 35.97 0.98
5337 6054 8.560374 GGTTCTCTTACCTTGTCATATTATTGC 58.440 37.037 0.00 0.00 35.23 3.56
5456 6173 0.911769 TCCTCACTGGCTGGTATTGG 59.088 55.000 0.00 0.00 35.26 3.16
5466 6183 3.055094 TGGCTGGTATTGGTTCTTCTCTC 60.055 47.826 0.00 0.00 0.00 3.20
5580 6297 6.849085 ATAAATCTGGTTTTGTGGCACATA 57.151 33.333 22.73 14.47 44.52 2.29
5638 6355 7.068716 AGGTAAATCCTATTTTCAGAATGCCAC 59.931 37.037 0.00 0.00 46.10 5.01
5643 6360 3.837213 ATTTTCAGAATGCCACGACAG 57.163 42.857 0.00 0.00 34.76 3.51
5644 6361 2.254546 TTTCAGAATGCCACGACAGT 57.745 45.000 0.00 0.00 34.76 3.55
5675 6393 5.165676 TGACACGCGATTCTACTAAAATGT 58.834 37.500 15.93 0.35 0.00 2.71
5696 6414 2.212652 TGGCGATGCTGCTATTACTTG 58.787 47.619 0.00 0.00 34.52 3.16
5736 6454 9.159254 TGTTACATCATCCCTATCAGAAGTTAT 57.841 33.333 0.00 0.00 0.00 1.89
5743 6461 3.181451 CCCTATCAGAAGTTATGCCTGCA 60.181 47.826 0.00 0.00 0.00 4.41
5835 6553 6.260271 ACACTGTTTCCTACACTCTTTTTAGC 59.740 38.462 0.00 0.00 32.10 3.09
5867 6585 4.994852 AGAGCGCTAATGTCTGTTGTTTTA 59.005 37.500 11.50 0.00 0.00 1.52
5925 6643 9.686683 ACAATATCTGGCAAAGAAATTACTACT 57.313 29.630 0.00 0.00 38.79 2.57
6014 6732 3.459598 TGGCCCTGCTACTCAATTATCTT 59.540 43.478 0.00 0.00 0.00 2.40
6016 6734 4.889995 GGCCCTGCTACTCAATTATCTTTT 59.110 41.667 0.00 0.00 0.00 2.27
6017 6735 5.360999 GGCCCTGCTACTCAATTATCTTTTT 59.639 40.000 0.00 0.00 0.00 1.94
6041 6759 6.494893 TTTTTGCGACATTGCTACTCTATT 57.505 33.333 0.00 0.00 35.36 1.73
6042 6760 7.603963 TTTTTGCGACATTGCTACTCTATTA 57.396 32.000 0.00 0.00 35.36 0.98
6043 6761 7.786178 TTTTGCGACATTGCTACTCTATTAT 57.214 32.000 0.00 0.00 35.36 1.28
6044 6762 7.408132 TTTGCGACATTGCTACTCTATTATC 57.592 36.000 0.00 0.00 35.36 1.75
6045 6763 6.332735 TGCGACATTGCTACTCTATTATCT 57.667 37.500 0.00 0.00 35.36 1.98
6046 6764 7.448748 TGCGACATTGCTACTCTATTATCTA 57.551 36.000 0.00 0.00 35.36 1.98
6047 6765 8.056407 TGCGACATTGCTACTCTATTATCTAT 57.944 34.615 0.00 0.00 35.36 1.98
6048 6766 7.970614 TGCGACATTGCTACTCTATTATCTATG 59.029 37.037 0.00 0.00 35.36 2.23
6049 6767 7.433719 GCGACATTGCTACTCTATTATCTATGG 59.566 40.741 0.00 0.00 0.00 2.74
6050 6768 7.918033 CGACATTGCTACTCTATTATCTATGGG 59.082 40.741 0.00 0.00 0.00 4.00
6051 6769 8.901472 ACATTGCTACTCTATTATCTATGGGA 57.099 34.615 0.00 0.00 0.00 4.37
6052 6770 8.754080 ACATTGCTACTCTATTATCTATGGGAC 58.246 37.037 0.00 0.00 0.00 4.46
6137 6855 9.338622 AGATTTACCTGTACATAACTAAATGCC 57.661 33.333 0.00 0.00 0.00 4.40
6138 6856 9.116067 GATTTACCTGTACATAACTAAATGCCA 57.884 33.333 0.00 0.00 0.00 4.92
6148 6866 4.935352 AACTAAATGCCAAGCTTGAACA 57.065 36.364 28.05 23.45 0.00 3.18
6151 6869 3.825143 AAATGCCAAGCTTGAACACTT 57.175 38.095 28.05 17.47 0.00 3.16
6152 6870 3.825143 AATGCCAAGCTTGAACACTTT 57.175 38.095 28.05 13.70 0.00 2.66
6153 6871 2.582728 TGCCAAGCTTGAACACTTTG 57.417 45.000 28.05 9.25 0.00 2.77
6154 6872 1.136695 TGCCAAGCTTGAACACTTTGG 59.863 47.619 28.05 9.54 0.00 3.28
6155 6873 1.856802 CCAAGCTTGAACACTTTGGC 58.143 50.000 28.05 0.00 0.00 4.52
6156 6874 1.410153 CCAAGCTTGAACACTTTGGCT 59.590 47.619 28.05 0.00 0.00 4.75
6157 6875 2.466846 CAAGCTTGAACACTTTGGCTG 58.533 47.619 22.31 0.00 0.00 4.85
6170 6888 1.761449 TTGGCTGTTGAGCTGACAAA 58.239 45.000 0.00 0.00 45.44 2.83
6172 6890 3.138884 TGGCTGTTGAGCTGACAAATA 57.861 42.857 0.00 0.00 45.44 1.40
6207 6932 2.294512 CACAGCTTTCCCTTCCTGAAAC 59.705 50.000 0.00 0.00 0.00 2.78
6265 6990 3.181447 CCCATGCCTATGTGAGTCATCTT 60.181 47.826 0.00 0.00 37.91 2.40
6298 7023 2.620251 TGGACAAGGATAAGGCATCG 57.380 50.000 0.00 0.00 34.12 3.84
6304 7029 3.119495 ACAAGGATAAGGCATCGCAAAAC 60.119 43.478 0.00 0.00 34.12 2.43
6314 7039 2.845967 GCATCGCAAAACCAAGTAATCG 59.154 45.455 0.00 0.00 0.00 3.34
6322 7047 0.988832 ACCAAGTAATCGCCCAGGAA 59.011 50.000 0.00 0.00 0.00 3.36
6330 7055 0.179073 ATCGCCCAGGAAAGATCACG 60.179 55.000 0.00 0.00 0.00 4.35
6393 7121 2.287915 AGAATGGTATGCATTTCGACGC 59.712 45.455 3.54 0.00 0.00 5.19
6394 7122 1.662517 ATGGTATGCATTTCGACGCA 58.337 45.000 3.54 5.88 43.45 5.24
6405 7133 2.852495 TTCGACGCAAGGATCCCAGC 62.852 60.000 8.55 12.11 46.39 4.85
6481 7209 3.184581 GTGATCATAACCGCCTTTCGATC 59.815 47.826 0.00 0.00 41.67 3.69
6520 7248 4.310769 CAGTAGTCCAGTTTCTTCTGTGG 58.689 47.826 0.00 0.00 34.02 4.17
6657 7385 1.485838 GATGATCAGCACTCACCGCG 61.486 60.000 5.98 0.00 0.00 6.46
6658 7386 2.887568 GATCAGCACTCACCGCGG 60.888 66.667 26.86 26.86 0.00 6.46
6659 7387 3.649277 GATCAGCACTCACCGCGGT 62.649 63.158 28.70 28.70 0.00 5.68
6700 7428 3.004419 TCGTATTCGCATCTCCCTTGTAG 59.996 47.826 0.00 0.00 36.96 2.74
6701 7429 2.246719 ATTCGCATCTCCCTTGTAGC 57.753 50.000 0.00 0.00 0.00 3.58
6702 7430 0.901827 TTCGCATCTCCCTTGTAGCA 59.098 50.000 0.00 0.00 0.00 3.49
6731 7459 2.031919 GTGGCACCCGTGATGTCA 59.968 61.111 6.29 0.00 0.00 3.58
6759 7487 2.629617 CAGGTTCTCCCTTTGCACATTT 59.370 45.455 0.00 0.00 42.73 2.32
6761 7489 4.280677 CAGGTTCTCCCTTTGCACATTTTA 59.719 41.667 0.00 0.00 42.73 1.52
6762 7490 5.047092 CAGGTTCTCCCTTTGCACATTTTAT 60.047 40.000 0.00 0.00 42.73 1.40
6763 7491 5.047092 AGGTTCTCCCTTTGCACATTTTATG 60.047 40.000 0.00 0.00 42.73 1.90
6776 7504 6.917477 TGCACATTTTATGTCTGAACTTGTTC 59.083 34.615 6.56 6.56 42.70 3.18
6818 7546 3.959449 TGCAGTCATCTTAGCTCTGATCT 59.041 43.478 0.00 0.00 0.00 2.75
6951 7705 1.669115 GAAGCTCCAGCAGTTCGCA 60.669 57.895 0.48 0.00 46.13 5.10
7020 7777 4.451150 TACCAGCCGAGGCAAGCG 62.451 66.667 17.18 2.81 44.88 4.68
7221 7981 1.133761 AGGCTGATCTAGTAGTGGCGA 60.134 52.381 0.00 0.00 0.00 5.54
7222 7982 1.001158 GGCTGATCTAGTAGTGGCGAC 60.001 57.143 0.00 0.00 0.00 5.19
7223 7983 1.950909 GCTGATCTAGTAGTGGCGACT 59.049 52.381 6.61 6.61 36.07 4.18
7224 7984 2.287308 GCTGATCTAGTAGTGGCGACTG 60.287 54.545 12.14 0.00 33.21 3.51
7225 7985 2.292016 CTGATCTAGTAGTGGCGACTGG 59.708 54.545 12.14 0.00 33.21 4.00
7226 7986 1.001158 GATCTAGTAGTGGCGACTGGC 60.001 57.143 12.14 4.49 42.51 4.85
7241 8001 0.531657 CTGGCCAGTGAGAGAGTGAG 59.468 60.000 25.53 0.00 0.00 3.51
7308 8069 2.223377 GGCGTTTACTTTGACCTGACAG 59.777 50.000 0.00 0.00 0.00 3.51
7323 8084 1.552337 TGACAGCAGAGGATGGTTCTC 59.448 52.381 0.00 0.00 37.60 2.87
7328 8089 2.909006 AGCAGAGGATGGTTCTCAGAAA 59.091 45.455 0.00 0.00 35.67 2.52
7338 8099 7.227512 AGGATGGTTCTCAGAAAAATTATAGCG 59.772 37.037 0.00 0.00 0.00 4.26
7356 8117 1.497991 CGGTCGTGTGATGTGACTTT 58.502 50.000 0.00 0.00 33.21 2.66
7357 8118 1.192312 CGGTCGTGTGATGTGACTTTG 59.808 52.381 0.00 0.00 33.21 2.77
7379 8140 1.071987 CTTGTGAGTGGCTGAGGCA 59.928 57.895 3.93 3.93 40.87 4.75
7431 8192 9.013229 ACTGTGATTAGCATAATTTTCTGTTCA 57.987 29.630 0.00 0.00 0.00 3.18
7438 8199 4.963953 GCATAATTTTCTGTTCATCGACCG 59.036 41.667 0.00 0.00 0.00 4.79
7484 8245 5.593095 GGAAATGGGATACTGTAGTTTTCCC 59.407 44.000 18.68 18.68 43.79 3.97
7519 8280 6.870971 TGTGGAATTTAAGGCCGATATAAC 57.129 37.500 0.00 0.00 0.00 1.89
7520 8281 6.358178 TGTGGAATTTAAGGCCGATATAACA 58.642 36.000 0.00 0.00 0.00 2.41
7521 8282 7.001674 TGTGGAATTTAAGGCCGATATAACAT 58.998 34.615 0.00 0.00 0.00 2.71
7522 8283 7.040755 TGTGGAATTTAAGGCCGATATAACATG 60.041 37.037 0.00 0.00 0.00 3.21
7527 8288 9.744468 AATTTAAGGCCGATATAACATGTTTTC 57.256 29.630 17.78 10.56 0.00 2.29
7591 8352 2.042686 TGCCTAAAATCATCGCAGCT 57.957 45.000 0.00 0.00 0.00 4.24
7692 8453 7.826690 TGGAACCACTAAAATCTTGATTAAGC 58.173 34.615 0.00 0.00 33.82 3.09
7695 8456 6.842163 ACCACTAAAATCTTGATTAAGCGTG 58.158 36.000 0.00 3.25 33.82 5.34
7696 8457 5.739161 CCACTAAAATCTTGATTAAGCGTGC 59.261 40.000 0.00 0.00 33.82 5.34
7700 8461 6.695292 AAAATCTTGATTAAGCGTGCTTTG 57.305 33.333 12.93 0.00 37.47 2.77
7702 8463 4.404507 TCTTGATTAAGCGTGCTTTGAC 57.595 40.909 12.93 5.25 37.47 3.18
7704 8465 4.274705 TCTTGATTAAGCGTGCTTTGACAA 59.725 37.500 12.93 13.80 37.47 3.18
7714 8475 4.702392 CGTGCTTTGACAAGATAACTGAC 58.298 43.478 0.00 0.00 30.57 3.51
7716 8477 5.277297 CGTGCTTTGACAAGATAACTGACAA 60.277 40.000 0.00 0.00 30.57 3.18
7725 8486 6.169094 ACAAGATAACTGACAATGAGACCAG 58.831 40.000 0.00 0.00 0.00 4.00
7728 8489 3.864789 AACTGACAATGAGACCAGGTT 57.135 42.857 0.00 0.00 0.00 3.50
7730 8491 1.808945 CTGACAATGAGACCAGGTTGC 59.191 52.381 0.00 0.00 0.00 4.17
7733 8494 0.883833 CAATGAGACCAGGTTGCCAC 59.116 55.000 0.00 0.00 0.00 5.01
7756 8517 0.516877 CACGTGGTACGAGGTAACGA 59.483 55.000 7.95 0.00 46.05 3.85
7780 8541 5.904941 TCGTTAGACGATATGCCCTTTAAA 58.095 37.500 0.00 0.00 46.73 1.52
7781 8542 5.981315 TCGTTAGACGATATGCCCTTTAAAG 59.019 40.000 8.32 8.32 46.73 1.85
7793 8554 3.119814 GCCCTTTAAAGCAACTCTAGCAC 60.120 47.826 9.86 0.00 0.00 4.40
7801 8562 3.296709 AACTCTAGCACACCCCGCG 62.297 63.158 0.00 0.00 0.00 6.46
7861 8632 4.073200 GCTTTTGCGGGCTGGCAT 62.073 61.111 2.88 0.00 43.52 4.40
7867 8638 2.111878 GCGGGCTGGCATAGATGT 59.888 61.111 2.88 0.00 0.00 3.06
7874 8645 1.694150 GCTGGCATAGATGTAGACCCA 59.306 52.381 0.00 0.00 0.00 4.51
7940 8738 3.137459 CGCAGCTCCTCTCGACCT 61.137 66.667 0.00 0.00 0.00 3.85
7982 8780 9.956720 GCAACTTAAATTGATCTAGCATAATGT 57.043 29.630 0.00 0.00 0.00 2.71
8087 8886 6.435277 AGAACCACAAGTATGCATTTCAGAAT 59.565 34.615 3.54 0.00 0.00 2.40
8336 9135 0.833949 TGGCCTTCCCAAAACCAAAC 59.166 50.000 3.32 0.00 41.82 2.93
8362 9161 3.500680 GCATCCTTCGTCCTACACAAAAA 59.499 43.478 0.00 0.00 0.00 1.94
8412 9225 9.483916 TCGAACTAAAGAATGAGTTATGAAACA 57.516 29.630 0.00 0.00 36.04 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 1.673168 GGCTAAGAGGGAGCATGTTG 58.327 55.000 0.00 0.00 41.98 3.33
19 20 2.420687 CCTACAATGTGAGAAGAGGGGC 60.421 54.545 0.00 0.00 0.00 5.80
22 23 6.531503 TCTTACCTACAATGTGAGAAGAGG 57.468 41.667 0.00 0.00 0.00 3.69
61 62 8.243426 GCTGTTGATTTGATTAAGTAATGGTCA 58.757 33.333 0.00 0.00 0.00 4.02
80 81 7.615403 AGTTTACAATAGATCTGAGCTGTTGA 58.385 34.615 30.29 16.00 37.73 3.18
99 100 9.582223 CTTTTCACACGAGAGATAAAAGTTTAC 57.418 33.333 0.00 0.00 32.14 2.01
100 101 8.770828 CCTTTTCACACGAGAGATAAAAGTTTA 58.229 33.333 0.00 0.00 33.95 2.01
101 102 7.497909 TCCTTTTCACACGAGAGATAAAAGTTT 59.502 33.333 0.00 0.00 33.95 2.66
105 106 7.041372 CCTTTCCTTTTCACACGAGAGATAAAA 60.041 37.037 0.00 0.00 0.00 1.52
106 107 6.426937 CCTTTCCTTTTCACACGAGAGATAAA 59.573 38.462 0.00 0.00 0.00 1.40
110 111 3.134081 ACCTTTCCTTTTCACACGAGAGA 59.866 43.478 0.00 0.00 0.00 3.10
127 128 2.563406 CCTCCCCTTCCTCTTACCTTT 58.437 52.381 0.00 0.00 0.00 3.11
128 129 1.906692 GCCTCCCCTTCCTCTTACCTT 60.907 57.143 0.00 0.00 0.00 3.50
134 135 2.041928 CCTGCCTCCCCTTCCTCT 59.958 66.667 0.00 0.00 0.00 3.69
139 140 3.626596 TCCCTCCTGCCTCCCCTT 61.627 66.667 0.00 0.00 0.00 3.95
144 145 2.509916 CATGCTCCCTCCTGCCTC 59.490 66.667 0.00 0.00 0.00 4.70
145 146 2.903871 TAGCATGCTCCCTCCTGCCT 62.904 60.000 26.57 0.00 35.21 4.75
147 148 0.107017 TTTAGCATGCTCCCTCCTGC 60.107 55.000 26.57 0.00 34.85 4.85
148 149 2.425143 TTTTAGCATGCTCCCTCCTG 57.575 50.000 26.57 0.00 0.00 3.86
151 152 2.287248 GCGAATTTTAGCATGCTCCCTC 60.287 50.000 26.57 13.47 0.00 4.30
152 153 1.678101 GCGAATTTTAGCATGCTCCCT 59.322 47.619 26.57 2.21 0.00 4.20
155 156 3.427161 AAGGCGAATTTTAGCATGCTC 57.573 42.857 26.57 7.99 34.54 4.26
156 157 3.874392 AAAGGCGAATTTTAGCATGCT 57.126 38.095 25.99 25.99 34.54 3.79
157 158 5.748152 TCAATAAAGGCGAATTTTAGCATGC 59.252 36.000 10.51 10.51 34.54 4.06
158 159 6.974622 AGTCAATAAAGGCGAATTTTAGCATG 59.025 34.615 0.00 0.00 34.54 4.06
159 160 7.100458 AGTCAATAAAGGCGAATTTTAGCAT 57.900 32.000 0.00 0.00 34.54 3.79
209 210 5.694458 GGTGAAACAAACAAGACAAAACTGT 59.306 36.000 0.00 0.00 39.98 3.55
233 234 4.521130 TTACTGGACTGAAGCACACTAG 57.479 45.455 0.00 0.00 0.00 2.57
281 285 3.252215 AGTCAGTCAGAAACTCAGACTCG 59.748 47.826 0.00 0.00 40.59 4.18
334 352 1.617263 GGCCTTCCTTTCCTTTCCTCC 60.617 57.143 0.00 0.00 0.00 4.30
352 370 0.585357 GTGCAGATCACGATGATGGC 59.415 55.000 5.41 8.81 37.20 4.40
369 387 3.788766 GCGTACGGGCAAGCAGTG 61.789 66.667 18.39 0.00 0.00 3.66
370 388 4.308458 TGCGTACGGGCAAGCAGT 62.308 61.111 18.39 0.00 40.59 4.40
376 394 1.213537 GTCTAACTGCGTACGGGCA 59.786 57.895 18.39 6.32 41.45 5.36
390 408 3.509967 TCGGCAATTCAAGTCAGAGTCTA 59.490 43.478 0.00 0.00 0.00 2.59
392 413 2.688507 TCGGCAATTCAAGTCAGAGTC 58.311 47.619 0.00 0.00 0.00 3.36
396 417 3.363378 GCGATATCGGCAATTCAAGTCAG 60.363 47.826 25.51 0.00 40.23 3.51
397 418 2.543848 GCGATATCGGCAATTCAAGTCA 59.456 45.455 25.51 0.00 40.23 3.41
398 419 3.174799 GCGATATCGGCAATTCAAGTC 57.825 47.619 25.51 1.48 40.23 3.01
418 462 1.528586 CGGCTGCGAGAAAAGATATGG 59.471 52.381 0.00 0.00 0.00 2.74
446 490 5.482908 TCTGGTGAAGACTTTCTATTGCTC 58.517 41.667 0.00 0.00 34.31 4.26
468 515 0.954452 CAGCCTCTTGTGGGTGTTTC 59.046 55.000 11.39 0.00 46.92 2.78
506 557 2.308866 CTCCATCCCCCACTTAAACACT 59.691 50.000 0.00 0.00 0.00 3.55
524 575 0.335361 TCCCCTGTCCAGTCTACTCC 59.665 60.000 0.00 0.00 0.00 3.85
527 578 0.688087 CCCTCCCCTGTCCAGTCTAC 60.688 65.000 0.00 0.00 0.00 2.59
529 580 2.452114 CCCTCCCCTGTCCAGTCT 59.548 66.667 0.00 0.00 0.00 3.24
541 592 3.007973 GCGATATCTCCGCCCCTCC 62.008 68.421 0.34 0.00 46.22 4.30
542 593 2.574399 GCGATATCTCCGCCCCTC 59.426 66.667 0.34 0.00 46.22 4.30
625 711 6.239396 CCCTCACTATAAATCCTCTCTCGTA 58.761 44.000 0.00 0.00 0.00 3.43
650 736 4.179599 CTCTCCCCCTCCCCCTCC 62.180 77.778 0.00 0.00 0.00 4.30
651 737 4.179599 CCTCTCCCCCTCCCCCTC 62.180 77.778 0.00 0.00 0.00 4.30
652 738 4.761304 TCCTCTCCCCCTCCCCCT 62.761 72.222 0.00 0.00 0.00 4.79
653 739 4.500826 GTCCTCTCCCCCTCCCCC 62.501 77.778 0.00 0.00 0.00 5.40
654 740 3.268647 TTGTCCTCTCCCCCTCCCC 62.269 68.421 0.00 0.00 0.00 4.81
655 741 1.690985 CTTGTCCTCTCCCCCTCCC 60.691 68.421 0.00 0.00 0.00 4.30
656 742 2.371259 GCTTGTCCTCTCCCCCTCC 61.371 68.421 0.00 0.00 0.00 4.30
689 775 2.997315 CGCCTGGACTGGACTGGA 60.997 66.667 0.00 0.00 0.00 3.86
690 776 4.087892 CCGCCTGGACTGGACTGG 62.088 72.222 0.00 0.00 37.49 4.00
691 777 4.087892 CCCGCCTGGACTGGACTG 62.088 72.222 0.00 0.00 37.49 3.51
779 866 3.695825 GGTCTGGAGGGAGGGGGA 61.696 72.222 0.00 0.00 0.00 4.81
780 867 1.973346 TATGGTCTGGAGGGAGGGGG 61.973 65.000 0.00 0.00 0.00 5.40
783 884 1.981495 GGATTATGGTCTGGAGGGAGG 59.019 57.143 0.00 0.00 0.00 4.30
785 886 1.296832 TGGGATTATGGTCTGGAGGGA 59.703 52.381 0.00 0.00 0.00 4.20
828 931 1.172812 GGGTGGTTGCTTGTCTGGAC 61.173 60.000 0.00 0.00 0.00 4.02
847 950 2.128853 GAGGGCGAGCGATCTCTCTG 62.129 65.000 0.00 5.82 37.19 3.35
848 951 1.896660 GAGGGCGAGCGATCTCTCT 60.897 63.158 10.82 0.00 37.19 3.10
849 952 1.452145 AAGAGGGCGAGCGATCTCTC 61.452 60.000 2.43 2.43 35.76 3.20
853 969 0.596341 GAAGAAGAGGGCGAGCGATC 60.596 60.000 0.00 0.00 0.00 3.69
863 979 1.756538 GAGCAGAGGAGGAAGAAGAGG 59.243 57.143 0.00 0.00 0.00 3.69
866 982 0.179113 GCGAGCAGAGGAGGAAGAAG 60.179 60.000 0.00 0.00 0.00 2.85
888 1004 1.380515 TGCCGGAGAGGAGGAAGAG 60.381 63.158 5.05 0.00 45.00 2.85
920 1036 4.988598 ACGGTGGAGGCAGCAACG 62.989 66.667 0.00 0.00 0.00 4.10
947 1069 3.483869 AGAATCCTCCCGGCAGCC 61.484 66.667 0.00 0.00 0.00 4.85
1017 1160 2.010145 ATCAACGCTTGTGCTCGTAT 57.990 45.000 0.00 0.00 38.03 3.06
1058 1201 1.268539 GCAGGAAACACGAACCAACTG 60.269 52.381 0.00 0.00 0.00 3.16
1096 1241 1.887707 GCACGGATTAAGCGGAGGG 60.888 63.158 5.20 0.00 0.00 4.30
1102 1247 0.738975 GGGAAAGGCACGGATTAAGC 59.261 55.000 0.00 0.00 0.00 3.09
1139 1284 1.002087 AGCTGGAAAACACGGAGGTAG 59.998 52.381 0.00 0.00 0.00 3.18
1162 1311 5.592104 GGTTTACCCTGAATTAATGGTGG 57.408 43.478 0.06 0.90 32.27 4.61
1178 1327 0.602905 ACAGAGCACGCAGGGTTTAC 60.603 55.000 0.00 0.00 0.00 2.01
1186 1335 0.746204 TGGAAAACACAGAGCACGCA 60.746 50.000 0.00 0.00 0.00 5.24
1191 1340 2.294233 TGCTTGATGGAAAACACAGAGC 59.706 45.455 0.00 0.00 0.00 4.09
1194 1343 3.256383 TGGATGCTTGATGGAAAACACAG 59.744 43.478 0.00 0.00 0.00 3.66
1197 1346 3.448301 GGATGGATGCTTGATGGAAAACA 59.552 43.478 0.00 0.00 0.00 2.83
1200 1349 3.385314 TGGATGGATGCTTGATGGAAA 57.615 42.857 0.00 0.00 0.00 3.13
1201 1350 3.493334 GATGGATGGATGCTTGATGGAA 58.507 45.455 0.00 0.00 0.00 3.53
1202 1351 2.224942 GGATGGATGGATGCTTGATGGA 60.225 50.000 0.00 0.00 0.00 3.41
1203 1352 2.168496 GGATGGATGGATGCTTGATGG 58.832 52.381 0.00 0.00 0.00 3.51
1204 1353 2.871453 TGGATGGATGGATGCTTGATG 58.129 47.619 0.00 0.00 0.00 3.07
1208 1362 1.784593 TGGATGGATGGATGGATGCTT 59.215 47.619 0.00 0.00 0.00 3.91
1215 1369 1.612462 CCGTGGATGGATGGATGGATG 60.612 57.143 0.00 0.00 0.00 3.51
1217 1371 2.055689 GCCGTGGATGGATGGATGGA 62.056 60.000 0.00 0.00 0.00 3.41
1220 1374 1.644437 TTGGCCGTGGATGGATGGAT 61.644 55.000 0.00 0.00 0.00 3.41
1226 1380 3.136123 CTGCTTGGCCGTGGATGG 61.136 66.667 0.00 0.00 0.00 3.51
1227 1381 3.818787 GCTGCTTGGCCGTGGATG 61.819 66.667 0.00 0.00 0.00 3.51
1269 1423 2.830186 TAGTGGGGGAAATGCGGTGC 62.830 60.000 0.00 0.00 0.00 5.01
1270 1424 1.029947 GTAGTGGGGGAAATGCGGTG 61.030 60.000 0.00 0.00 0.00 4.94
1281 1435 0.323629 TTTGGAAGCGAGTAGTGGGG 59.676 55.000 0.00 0.00 0.00 4.96
1291 1445 1.196354 CTCTGCTCTGTTTTGGAAGCG 59.804 52.381 0.00 0.00 0.00 4.68
1303 1457 0.827368 GGACGGGAAATCTCTGCTCT 59.173 55.000 0.00 0.00 0.00 4.09
1312 1466 3.636764 GCCATTAATGAAGGACGGGAAAT 59.363 43.478 17.23 0.00 0.00 2.17
1318 1478 4.509970 TGTAATCGCCATTAATGAAGGACG 59.490 41.667 17.23 11.54 0.00 4.79
1319 1479 6.560253 ATGTAATCGCCATTAATGAAGGAC 57.440 37.500 17.23 7.44 0.00 3.85
1397 1561 2.621998 TCTTTATCCGTCCAGATCCGAC 59.378 50.000 1.25 1.25 0.00 4.79
1418 1582 0.031111 TCCATCCATCGACCCCTTCT 60.031 55.000 0.00 0.00 0.00 2.85
1425 1589 1.546029 TCGATCCATCCATCCATCGAC 59.454 52.381 0.00 0.00 41.60 4.20
1426 1590 1.923356 TCGATCCATCCATCCATCGA 58.077 50.000 0.00 0.00 43.63 3.59
1427 1591 2.797439 CGATCGATCCATCCATCCATCG 60.797 54.545 19.51 0.70 37.49 3.84
1428 1592 2.819115 CGATCGATCCATCCATCCATC 58.181 52.381 19.51 0.00 0.00 3.51
1431 1595 0.460987 GGCGATCGATCCATCCATCC 60.461 60.000 21.57 1.94 0.00 3.51
1491 1659 2.514458 TCCCATCCCAGAAAGAAAGC 57.486 50.000 0.00 0.00 0.00 3.51
1492 1660 3.956848 GGAATCCCATCCCAGAAAGAAAG 59.043 47.826 0.00 0.00 33.05 2.62
1495 1663 2.511218 CAGGAATCCCATCCCAGAAAGA 59.489 50.000 0.00 0.00 40.59 2.52
1496 1664 2.423947 CCAGGAATCCCATCCCAGAAAG 60.424 54.545 0.00 0.00 40.59 2.62
1497 1665 1.570501 CCAGGAATCCCATCCCAGAAA 59.429 52.381 0.00 0.00 40.59 2.52
1498 1666 1.225373 CCAGGAATCCCATCCCAGAA 58.775 55.000 0.00 0.00 40.59 3.02
1499 1667 0.698886 CCCAGGAATCCCATCCCAGA 60.699 60.000 0.00 0.00 40.59 3.86
1500 1668 1.723128 CCCCAGGAATCCCATCCCAG 61.723 65.000 0.00 0.00 40.59 4.45
1501 1669 1.701024 CCCCAGGAATCCCATCCCA 60.701 63.158 0.00 0.00 40.59 4.37
1502 1670 3.152265 GCCCCAGGAATCCCATCCC 62.152 68.421 0.00 0.00 40.59 3.85
1503 1671 0.772124 TAGCCCCAGGAATCCCATCC 60.772 60.000 0.00 0.00 39.96 3.51
1504 1672 1.149101 TTAGCCCCAGGAATCCCATC 58.851 55.000 0.00 0.00 33.88 3.51
1505 1673 1.500736 CTTTAGCCCCAGGAATCCCAT 59.499 52.381 0.00 0.00 33.88 4.00
1545 1713 4.248174 TGTAGCATTGGATTGGATTGGA 57.752 40.909 0.00 0.00 0.00 3.53
1546 1714 4.262292 CCATGTAGCATTGGATTGGATTGG 60.262 45.833 0.00 0.00 34.81 3.16
1547 1715 4.798263 GCCATGTAGCATTGGATTGGATTG 60.798 45.833 0.00 0.00 34.81 2.67
1548 1716 3.322828 GCCATGTAGCATTGGATTGGATT 59.677 43.478 0.00 0.00 34.81 3.01
1549 1717 2.895404 GCCATGTAGCATTGGATTGGAT 59.105 45.455 0.00 0.00 34.81 3.41
1550 1718 2.309613 GCCATGTAGCATTGGATTGGA 58.690 47.619 0.00 0.00 34.81 3.53
1551 1719 1.342174 GGCCATGTAGCATTGGATTGG 59.658 52.381 0.00 0.00 34.81 3.16
1552 1720 1.001048 CGGCCATGTAGCATTGGATTG 60.001 52.381 2.24 0.00 34.81 2.67
1553 1721 1.321474 CGGCCATGTAGCATTGGATT 58.679 50.000 2.24 0.00 34.81 3.01
1554 1722 0.538057 CCGGCCATGTAGCATTGGAT 60.538 55.000 2.24 0.00 34.81 3.41
1555 1723 1.152984 CCGGCCATGTAGCATTGGA 60.153 57.895 2.24 0.00 34.81 3.53
1556 1724 2.195567 CCCGGCCATGTAGCATTGG 61.196 63.158 2.24 0.00 36.03 3.16
1557 1725 1.037030 AACCCGGCCATGTAGCATTG 61.037 55.000 2.24 0.00 0.00 2.82
1558 1726 0.324275 AAACCCGGCCATGTAGCATT 60.324 50.000 2.24 0.00 0.00 3.56
1607 1775 1.222113 GCGGAGAAAAGGAGGAGGG 59.778 63.158 0.00 0.00 0.00 4.30
1668 1877 1.580845 CTTCTTGCCTCGCTGGTTGG 61.581 60.000 0.00 0.00 38.35 3.77
1673 1882 2.451167 CGAGCTTCTTGCCTCGCTG 61.451 63.158 0.00 0.00 44.23 5.18
1674 1883 2.125753 CGAGCTTCTTGCCTCGCT 60.126 61.111 0.00 0.00 44.23 4.93
1676 1885 2.125753 AGCGAGCTTCTTGCCTCG 60.126 61.111 5.75 5.75 41.50 4.63
1677 1886 2.105466 CCAGCGAGCTTCTTGCCTC 61.105 63.158 0.00 0.00 41.50 4.70
1678 1887 2.046507 CCAGCGAGCTTCTTGCCT 60.047 61.111 0.00 0.00 41.50 4.75
1679 1888 3.808656 GCCAGCGAGCTTCTTGCC 61.809 66.667 0.00 0.00 41.50 4.52
1683 1892 2.224495 GAGTGAGCCAGCGAGCTTCT 62.224 60.000 4.96 7.07 45.15 2.85
1685 1894 2.264166 GAGTGAGCCAGCGAGCTT 59.736 61.111 4.96 0.00 45.15 3.74
1694 1903 1.905894 AGAGGAGAAAAGGAGTGAGCC 59.094 52.381 0.00 0.00 0.00 4.70
1711 1920 2.918712 AGATTGGGCGGATACAAGAG 57.081 50.000 0.00 0.00 0.00 2.85
1716 1925 1.143073 AGGGAAAGATTGGGCGGATAC 59.857 52.381 0.00 0.00 0.00 2.24
1764 1977 2.046892 CAGGCGTCCCAAGGTCAG 60.047 66.667 0.00 0.00 0.00 3.51
1765 1978 2.847234 ACAGGCGTCCCAAGGTCA 60.847 61.111 0.00 0.00 0.00 4.02
1766 1979 2.047179 GACAGGCGTCCCAAGGTC 60.047 66.667 0.00 0.00 36.02 3.85
1767 1980 2.526873 AGACAGGCGTCCCAAGGT 60.527 61.111 5.98 0.00 43.73 3.50
1769 1982 1.831652 AAGGAGACAGGCGTCCCAAG 61.832 60.000 14.21 0.00 43.73 3.61
1770 1983 1.841556 AAGGAGACAGGCGTCCCAA 60.842 57.895 14.21 0.00 43.73 4.12
1776 1989 2.266055 GGGACAAGGAGACAGGCG 59.734 66.667 0.00 0.00 0.00 5.52
1803 2036 2.770699 ATTAGTCGCCGTAGTAGTGC 57.229 50.000 0.00 0.00 0.00 4.40
1821 2054 4.037684 CCTAGCAGCGGTTGTACTACTTAT 59.962 45.833 7.38 0.00 0.00 1.73
1868 2105 6.968263 TCTTTATGGGTGAGTGAGAGATAG 57.032 41.667 0.00 0.00 0.00 2.08
1869 2106 7.733773 TTTCTTTATGGGTGAGTGAGAGATA 57.266 36.000 0.00 0.00 0.00 1.98
1870 2107 6.627087 TTTCTTTATGGGTGAGTGAGAGAT 57.373 37.500 0.00 0.00 0.00 2.75
1874 2111 5.560724 TCCTTTTCTTTATGGGTGAGTGAG 58.439 41.667 0.00 0.00 0.00 3.51
1877 2114 6.133356 TGTTTCCTTTTCTTTATGGGTGAGT 58.867 36.000 0.00 0.00 0.00 3.41
1879 2116 7.125053 ACTTTGTTTCCTTTTCTTTATGGGTGA 59.875 33.333 0.00 0.00 0.00 4.02
1881 2118 7.432148 ACTTTGTTTCCTTTTCTTTATGGGT 57.568 32.000 0.00 0.00 0.00 4.51
1949 2190 1.422531 CATGGAAGAGGAGAGGGAGG 58.577 60.000 0.00 0.00 0.00 4.30
1979 2223 4.101790 CCACACGGCCAATGCGTC 62.102 66.667 2.24 0.00 38.85 5.19
1982 2226 4.054825 CACCCACACGGCCAATGC 62.055 66.667 2.24 0.00 33.26 3.56
1983 2227 2.597217 ACACCCACACGGCCAATG 60.597 61.111 2.24 2.32 33.26 2.82
1984 2228 2.597217 CACACCCACACGGCCAAT 60.597 61.111 2.24 0.00 33.26 3.16
1985 2229 3.765894 CTCACACCCACACGGCCAA 62.766 63.158 2.24 0.00 33.26 4.52
1986 2230 4.248842 CTCACACCCACACGGCCA 62.249 66.667 2.24 0.00 33.26 5.36
1988 2232 3.883744 CTCCTCACACCCACACGGC 62.884 68.421 0.00 0.00 33.26 5.68
1995 2247 2.495669 CTCTTTCTCTCTCCTCACACCC 59.504 54.545 0.00 0.00 0.00 4.61
2028 2280 3.042481 AGCTCACCCCAAAAGCTTC 57.958 52.632 0.00 0.00 43.67 3.86
2064 2316 4.227134 CGGCCCTCGTCCTCCATG 62.227 72.222 0.00 0.00 0.00 3.66
2152 2404 0.996762 GAGGAGGAGGAGGAGGAGGA 60.997 65.000 0.00 0.00 0.00 3.71
2153 2405 1.541672 GAGGAGGAGGAGGAGGAGG 59.458 68.421 0.00 0.00 0.00 4.30
2154 2406 1.150536 CGAGGAGGAGGAGGAGGAG 59.849 68.421 0.00 0.00 0.00 3.69
2155 2407 3.063197 GCGAGGAGGAGGAGGAGGA 62.063 68.421 0.00 0.00 0.00 3.71
2156 2408 2.520741 GCGAGGAGGAGGAGGAGG 60.521 72.222 0.00 0.00 0.00 4.30
2157 2409 2.520741 GGCGAGGAGGAGGAGGAG 60.521 72.222 0.00 0.00 0.00 3.69
2199 2451 1.344942 GAGCAGAACACGTACCAGCG 61.345 60.000 0.00 0.00 37.94 5.18
2221 2484 2.499289 GGATGAGAGAGGAAGCTGTGAA 59.501 50.000 0.00 0.00 0.00 3.18
2224 2487 1.273495 TGGGATGAGAGAGGAAGCTGT 60.273 52.381 0.00 0.00 0.00 4.40
2246 2509 1.204146 GATGGAGAAGTGGTAGGCCA 58.796 55.000 5.01 0.00 43.73 5.36
2247 2510 1.139853 CTGATGGAGAAGTGGTAGGCC 59.860 57.143 0.00 0.00 0.00 5.19
2248 2511 2.111384 TCTGATGGAGAAGTGGTAGGC 58.889 52.381 0.00 0.00 0.00 3.93
2249 2512 3.963374 TGATCTGATGGAGAAGTGGTAGG 59.037 47.826 0.00 0.00 33.12 3.18
2252 2515 3.717576 TCTGATCTGATGGAGAAGTGGT 58.282 45.455 0.00 0.00 33.12 4.16
2286 2567 2.872245 GCAGCAGAGTTTGTTCACTGTA 59.128 45.455 0.00 0.00 33.57 2.74
2310 2591 0.614979 TTTGGGGAGGACGAGAGAGG 60.615 60.000 0.00 0.00 0.00 3.69
2318 2599 1.685765 GGGGCATTTTGGGGAGGAC 60.686 63.158 0.00 0.00 0.00 3.85
2414 2695 2.435663 CCAGCACACCATCCACCA 59.564 61.111 0.00 0.00 0.00 4.17
2444 2725 0.536006 AGTGGTTCTGTTCTGGCAGC 60.536 55.000 10.34 0.00 36.49 5.25
2481 2762 6.745116 AGAAAAGAACCTTAAAACCAATCGG 58.255 36.000 0.00 0.00 38.77 4.18
2482 2763 7.169140 CCAAGAAAAGAACCTTAAAACCAATCG 59.831 37.037 0.00 0.00 0.00 3.34
2530 2811 4.202419 GGCCTCTCTGTATCTCTCTCTGTA 60.202 50.000 0.00 0.00 0.00 2.74
2531 2812 3.435026 GGCCTCTCTGTATCTCTCTCTGT 60.435 52.174 0.00 0.00 0.00 3.41
2532 2813 3.149196 GGCCTCTCTGTATCTCTCTCTG 58.851 54.545 0.00 0.00 0.00 3.35
2535 2816 2.752829 GCTGGCCTCTCTGTATCTCTCT 60.753 54.545 3.32 0.00 0.00 3.10
2536 2817 1.613437 GCTGGCCTCTCTGTATCTCTC 59.387 57.143 3.32 0.00 0.00 3.20
2538 2819 0.678950 GGCTGGCCTCTCTGTATCTC 59.321 60.000 3.32 0.00 0.00 2.75
2539 2820 1.112315 CGGCTGGCCTCTCTGTATCT 61.112 60.000 3.32 0.00 0.00 1.98
2541 2822 2.136878 CCGGCTGGCCTCTCTGTAT 61.137 63.158 3.32 0.00 0.00 2.29
2542 2823 2.759973 CCGGCTGGCCTCTCTGTA 60.760 66.667 3.32 0.00 0.00 2.74
2593 2874 0.953960 CCCCAAAGTACACGGTGCTC 60.954 60.000 8.30 1.50 0.00 4.26
2647 2928 4.729918 CTGGGAGCTGGTGGTGGC 62.730 72.222 0.00 0.00 0.00 5.01
2660 2941 4.641645 TCGGTGCTTGGTGCTGGG 62.642 66.667 0.00 0.00 43.37 4.45
2665 2946 4.025401 GCCGTTCGGTGCTTGGTG 62.025 66.667 12.81 0.00 0.00 4.17
2668 2949 2.051345 GTTGCCGTTCGGTGCTTG 60.051 61.111 12.81 0.00 0.00 4.01
2669 2950 3.284449 GGTTGCCGTTCGGTGCTT 61.284 61.111 12.81 0.00 0.00 3.91
2670 2951 4.555709 TGGTTGCCGTTCGGTGCT 62.556 61.111 12.81 0.00 0.00 4.40
2671 2952 2.615262 TTTTGGTTGCCGTTCGGTGC 62.615 55.000 12.81 0.16 0.00 5.01
2676 2957 2.035321 TGGAGAATTTTGGTTGCCGTTC 59.965 45.455 0.00 0.00 0.00 3.95
2685 2966 1.547372 CAGGGCTGTGGAGAATTTTGG 59.453 52.381 0.00 0.00 0.00 3.28
2697 2978 0.962356 CGATTTGGAAGCAGGGCTGT 60.962 55.000 0.00 0.00 39.62 4.40
2702 2983 3.019564 AGGAAATCGATTTGGAAGCAGG 58.980 45.455 27.27 0.00 0.00 4.85
2752 3033 0.524862 GTGCAGGCTGAGTTCCATTG 59.475 55.000 20.86 0.00 0.00 2.82
2753 3034 0.111061 TGTGCAGGCTGAGTTCCATT 59.889 50.000 20.86 0.00 0.00 3.16
2762 3313 4.319911 CCAAAATTGAAATTGTGCAGGCTG 60.320 41.667 10.94 10.94 33.23 4.85
2789 3340 4.202567 TGGCAGTGGGAAAAAGATAGTCTT 60.203 41.667 0.00 0.00 38.59 3.01
2791 3342 3.440522 GTGGCAGTGGGAAAAAGATAGTC 59.559 47.826 0.00 0.00 0.00 2.59
2798 3349 1.118838 CCTTGTGGCAGTGGGAAAAA 58.881 50.000 0.00 0.00 0.00 1.94
2806 3358 1.480545 GTTTTGGTTCCTTGTGGCAGT 59.519 47.619 0.00 0.00 0.00 4.40
2891 3464 1.006043 TCACGGAGGAGGAGATCAGTT 59.994 52.381 0.00 0.00 0.00 3.16
2892 3465 0.626382 TCACGGAGGAGGAGATCAGT 59.374 55.000 0.00 0.00 0.00 3.41
2893 3466 1.680735 CTTCACGGAGGAGGAGATCAG 59.319 57.143 0.00 0.00 0.00 2.90
2894 3467 1.285078 TCTTCACGGAGGAGGAGATCA 59.715 52.381 0.00 0.00 0.00 2.92
2932 3505 3.181536 GCAAGCATCACGATATCGACATC 60.182 47.826 30.75 14.67 43.02 3.06
2933 3506 2.733552 GCAAGCATCACGATATCGACAT 59.266 45.455 30.75 17.89 43.02 3.06
2934 3507 2.127251 GCAAGCATCACGATATCGACA 58.873 47.619 30.75 16.46 43.02 4.35
2935 3508 1.457303 GGCAAGCATCACGATATCGAC 59.543 52.381 30.75 13.87 43.02 4.20
2936 3509 1.341209 AGGCAAGCATCACGATATCGA 59.659 47.619 30.75 10.61 43.02 3.59
2937 3510 1.723542 GAGGCAAGCATCACGATATCG 59.276 52.381 23.18 23.18 46.33 2.92
2969 3542 0.461135 AGCCACAAACAAAGCCACAG 59.539 50.000 0.00 0.00 0.00 3.66
2970 3543 0.901124 AAGCCACAAACAAAGCCACA 59.099 45.000 0.00 0.00 0.00 4.17
2971 3544 1.665169 CAAAGCCACAAACAAAGCCAC 59.335 47.619 0.00 0.00 0.00 5.01
2972 3545 1.552337 TCAAAGCCACAAACAAAGCCA 59.448 42.857 0.00 0.00 0.00 4.75
2973 3546 2.204237 CTCAAAGCCACAAACAAAGCC 58.796 47.619 0.00 0.00 0.00 4.35
2974 3547 1.594397 GCTCAAAGCCACAAACAAAGC 59.406 47.619 0.00 0.00 34.48 3.51
2988 3561 2.331098 CAAGCGTTGCGGCTCAAA 59.669 55.556 0.00 0.00 43.93 2.69
3063 3640 2.047213 AAAGGACGACCGGAAAGCCA 62.047 55.000 9.46 0.00 41.83 4.75
3072 3649 1.161563 TGTTGCGGAAAAGGACGACC 61.162 55.000 0.00 0.00 0.00 4.79
3085 3662 0.729140 GACGGCCAATTTCTGTTGCG 60.729 55.000 2.24 0.00 0.00 4.85
3136 3713 8.626526 GGACGGCCAATTTCTTTCTTATAATAA 58.373 33.333 0.00 0.00 0.00 1.40
3139 3716 6.184789 AGGACGGCCAATTTCTTTCTTATAA 58.815 36.000 11.69 0.00 36.29 0.98
3140 3717 5.751586 AGGACGGCCAATTTCTTTCTTATA 58.248 37.500 11.69 0.00 36.29 0.98
3141 3718 4.600062 AGGACGGCCAATTTCTTTCTTAT 58.400 39.130 11.69 0.00 36.29 1.73
3142 3719 4.028993 AGGACGGCCAATTTCTTTCTTA 57.971 40.909 11.69 0.00 36.29 2.10
3143 3720 2.876581 AGGACGGCCAATTTCTTTCTT 58.123 42.857 11.69 0.00 36.29 2.52
3144 3721 2.586648 AGGACGGCCAATTTCTTTCT 57.413 45.000 11.69 0.00 36.29 2.52
3145 3722 3.005367 TCAAAGGACGGCCAATTTCTTTC 59.995 43.478 11.69 0.00 36.29 2.62
3148 3725 2.162681 CTCAAAGGACGGCCAATTTCT 58.837 47.619 11.69 0.00 36.29 2.52
3150 3727 2.162681 CTCTCAAAGGACGGCCAATTT 58.837 47.619 11.69 0.00 36.29 1.82
3151 3728 1.073923 ACTCTCAAAGGACGGCCAATT 59.926 47.619 11.69 0.00 36.29 2.32
3153 3730 0.472471 AACTCTCAAAGGACGGCCAA 59.528 50.000 11.69 0.00 36.29 4.52
3154 3731 0.472471 AAACTCTCAAAGGACGGCCA 59.528 50.000 11.69 0.00 36.29 5.36
3157 3734 4.632538 AAAACAAACTCTCAAAGGACGG 57.367 40.909 0.00 0.00 0.00 4.79
3158 3735 5.739161 CAGAAAAACAAACTCTCAAAGGACG 59.261 40.000 0.00 0.00 0.00 4.79
3163 3795 6.024552 ACAGCAGAAAAACAAACTCTCAAA 57.975 33.333 0.00 0.00 0.00 2.69
3208 3841 4.778534 CAGGAGAACTGCATGTCAAAAT 57.221 40.909 0.00 0.00 40.97 1.82
3248 3882 5.876357 AGAGAGCACCCATAAAACAAACTA 58.124 37.500 0.00 0.00 0.00 2.24
3259 3894 1.202330 CAGGAGAAGAGAGCACCCAT 58.798 55.000 0.00 0.00 0.00 4.00
3303 3938 1.487976 CAGCAAAGGCAGATAGGAGGA 59.512 52.381 0.00 0.00 44.61 3.71
3314 3949 1.133790 CAGGATAACAGCAGCAAAGGC 59.866 52.381 0.00 0.00 41.61 4.35
3421 4079 2.741517 GAGAAGAAAAGACCAGAGCAGC 59.258 50.000 0.00 0.00 0.00 5.25
3435 4093 4.864806 CGAAGTCCAAATGATCGAGAAGAA 59.135 41.667 0.00 0.00 35.65 2.52
3458 4116 1.032014 TCTGCAACTTCCTTTGGCAC 58.968 50.000 0.00 0.00 0.00 5.01
3473 4131 8.795786 TGTGATAGTTTTGTGTTAAAATCTGC 57.204 30.769 0.00 0.00 0.00 4.26
3482 4140 7.251704 CAGAAGACTGTGATAGTTTTGTGTT 57.748 36.000 2.50 0.00 38.91 3.32
3530 4192 2.760092 AGTGTGTGTTGCAAGGACAAAT 59.240 40.909 11.81 0.79 0.00 2.32
3538 4200 5.815850 CAAACTGTATAGTGTGTGTTGCAA 58.184 37.500 0.00 0.00 37.38 4.08
3550 4212 7.891183 AGAAACTGCTGTACAAACTGTATAG 57.109 36.000 0.00 6.29 42.61 1.31
3561 4223 7.218963 CAGAGAAAACAAAAGAAACTGCTGTAC 59.781 37.037 0.00 0.00 0.00 2.90
3564 4226 6.324819 TCAGAGAAAACAAAAGAAACTGCTG 58.675 36.000 0.00 0.00 0.00 4.41
3565 4227 6.515272 TCAGAGAAAACAAAAGAAACTGCT 57.485 33.333 0.00 0.00 0.00 4.24
3566 4228 7.761651 AATCAGAGAAAACAAAAGAAACTGC 57.238 32.000 0.00 0.00 0.00 4.40
3582 4244 8.511604 ACAGAGAAAACAAAAGAAATCAGAGA 57.488 30.769 0.00 0.00 0.00 3.10
3651 4328 6.404074 GCCGTACTTCTAGTACTTGCTTAAGA 60.404 42.308 6.67 0.00 46.68 2.10
3763 4440 2.736721 TCTCGTTTATGTTGCTGTCTGC 59.263 45.455 0.00 0.00 43.25 4.26
3807 4484 3.070446 TCCCTTTCTTACGCTTGAGTTCA 59.930 43.478 0.00 0.00 0.00 3.18
3933 4610 0.962855 TCAGTGAGGAGAGGACTGCG 60.963 60.000 0.00 0.00 39.46 5.18
3934 4611 0.530288 GTCAGTGAGGAGAGGACTGC 59.470 60.000 0.00 0.00 37.59 4.40
3936 4613 0.780637 TGGTCAGTGAGGAGAGGACT 59.219 55.000 0.00 0.00 0.00 3.85
3958 4635 2.124942 GCTGCTAGGAGTGGTGGC 60.125 66.667 13.28 0.00 0.00 5.01
4034 4711 2.892852 CACTTCATTTCAGGGAAGGCAA 59.107 45.455 0.00 0.00 43.70 4.52
4072 4749 8.655651 TTTCTGTTGTTTGGGAATAAAATGAC 57.344 30.769 0.00 0.00 0.00 3.06
4121 4799 8.928733 ACAAATTAAGCTGTGCATAAAGAAATG 58.071 29.630 0.00 0.00 0.00 2.32
4126 4804 9.584839 GAAAAACAAATTAAGCTGTGCATAAAG 57.415 29.630 0.00 0.00 0.00 1.85
4308 4988 7.105588 TGGTCCTATGCTAGTATATGCAAATG 58.894 38.462 0.62 0.00 42.74 2.32
4342 5022 6.504398 CCATCATCAAATCTGAGAACCATTG 58.496 40.000 0.00 0.00 34.23 2.82
4375 5056 4.991153 TGTAAAAACACCAGCATTGTCA 57.009 36.364 0.00 0.00 0.00 3.58
4376 5057 5.810074 ACTTTGTAAAAACACCAGCATTGTC 59.190 36.000 0.00 0.00 0.00 3.18
4378 5059 7.763172 TTACTTTGTAAAAACACCAGCATTG 57.237 32.000 0.00 0.00 0.00 2.82
4527 5210 4.687483 CCAGAATTGAAATGTGAACTTGGC 59.313 41.667 0.00 0.00 0.00 4.52
4683 5397 3.944055 AGATACATACCATGGTCTCGC 57.056 47.619 23.76 7.45 33.60 5.03
4715 5429 5.975939 GGATTATGACAAAATGAAGAGCAGC 59.024 40.000 0.00 0.00 0.00 5.25
4769 5486 1.069296 TGAAAGAATTTGACGGCTGCG 60.069 47.619 0.00 0.00 39.27 5.18
4776 5493 4.755123 TCCTCCTTCGTGAAAGAATTTGAC 59.245 41.667 0.00 0.00 39.27 3.18
4779 5496 4.041691 TCCTCCTCCTTCGTGAAAGAATTT 59.958 41.667 0.00 0.00 43.98 1.82
4791 5508 1.948144 GCAAGCACTTCCTCCTCCTTC 60.948 57.143 0.00 0.00 0.00 3.46
4806 5523 2.679837 TGCTAGCAAAGTATCAGCAAGC 59.320 45.455 16.84 0.00 39.18 4.01
4868 5585 1.582610 GGCATCTTTTTCCGTCGCCA 61.583 55.000 0.00 0.00 37.98 5.69
4885 5602 1.866601 GGCAACATTTGTGTTTGAGGC 59.133 47.619 0.00 0.00 0.00 4.70
4886 5603 3.181477 TGAGGCAACATTTGTGTTTGAGG 60.181 43.478 0.00 0.00 41.41 3.86
4962 5679 8.647256 ACTGTACAACCTCAGTTACTAGTATT 57.353 34.615 2.79 0.00 41.33 1.89
5000 5717 6.534475 AATCACACCTGAATTACAATGCAT 57.466 33.333 0.00 0.00 0.00 3.96
5077 5794 2.806244 CTGCGTAACCACTTTGTTAGCT 59.194 45.455 0.00 0.00 31.66 3.32
5269 5986 4.965283 TCCCCACCTTTTATTCAAGGAT 57.035 40.909 6.48 0.00 45.79 3.24
5303 6020 0.611714 GGTAAGAGAACCGAGGGCAA 59.388 55.000 0.00 0.00 0.00 4.52
5306 6023 1.900486 ACAAGGTAAGAGAACCGAGGG 59.100 52.381 0.00 0.00 44.77 4.30
5331 6048 6.714810 AGTAAACATGAGAACACCAGCAATAA 59.285 34.615 0.00 0.00 0.00 1.40
5333 6050 5.072741 AGTAAACATGAGAACACCAGCAAT 58.927 37.500 0.00 0.00 0.00 3.56
5337 6054 5.760253 ACAGAAGTAAACATGAGAACACCAG 59.240 40.000 0.00 0.00 0.00 4.00
5456 6173 5.132897 TCAGAGAGCAAAGAGAGAAGAAC 57.867 43.478 0.00 0.00 0.00 3.01
5466 6183 5.525378 ACAACAGTACTTTCAGAGAGCAAAG 59.475 40.000 0.00 0.00 35.97 2.77
5580 6297 9.678260 ACTGCTATTCTCATCTTTTGTTCTATT 57.322 29.630 0.00 0.00 0.00 1.73
5624 6341 2.571212 ACTGTCGTGGCATTCTGAAAA 58.429 42.857 0.00 0.00 0.00 2.29
5638 6355 4.030865 TCGCGTGTCATAAAATAACTGTCG 59.969 41.667 5.77 0.00 0.00 4.35
5643 6360 7.838498 AGTAGAATCGCGTGTCATAAAATAAC 58.162 34.615 5.77 0.00 0.00 1.89
5644 6361 7.997107 AGTAGAATCGCGTGTCATAAAATAA 57.003 32.000 5.77 0.00 0.00 1.40
5675 6393 2.613595 CAAGTAATAGCAGCATCGCCAA 59.386 45.455 0.00 0.00 0.00 4.52
5696 6414 8.552034 GGATGATGTAACAACAGATTAGCTAAC 58.448 37.037 8.70 3.23 0.00 2.34
5835 6553 5.005203 CAGACATTAGCGCTCTTCTTAACAG 59.995 44.000 16.34 0.37 0.00 3.16
5867 6585 1.729586 TGTACTTGAAGAGGGCCTGT 58.270 50.000 12.95 2.79 0.00 4.00
6018 6736 6.494893 AATAGAGTAGCAATGTCGCAAAAA 57.505 33.333 0.00 0.00 0.00 1.94
6019 6737 7.710907 AGATAATAGAGTAGCAATGTCGCAAAA 59.289 33.333 0.00 0.00 0.00 2.44
6020 6738 7.210174 AGATAATAGAGTAGCAATGTCGCAAA 58.790 34.615 0.00 0.00 0.00 3.68
6021 6739 6.749139 AGATAATAGAGTAGCAATGTCGCAA 58.251 36.000 0.00 0.00 0.00 4.85
6022 6740 6.332735 AGATAATAGAGTAGCAATGTCGCA 57.667 37.500 0.00 0.00 0.00 5.10
6023 6741 7.433719 CCATAGATAATAGAGTAGCAATGTCGC 59.566 40.741 0.00 0.00 0.00 5.19
6024 6742 7.918033 CCCATAGATAATAGAGTAGCAATGTCG 59.082 40.741 0.00 0.00 0.00 4.35
6025 6743 8.972127 TCCCATAGATAATAGAGTAGCAATGTC 58.028 37.037 0.00 0.00 0.00 3.06
6026 6744 8.754080 GTCCCATAGATAATAGAGTAGCAATGT 58.246 37.037 0.00 0.00 0.00 2.71
6027 6745 8.753133 TGTCCCATAGATAATAGAGTAGCAATG 58.247 37.037 0.00 0.00 0.00 2.82
6028 6746 8.754080 GTGTCCCATAGATAATAGAGTAGCAAT 58.246 37.037 0.00 0.00 0.00 3.56
6029 6747 7.178628 GGTGTCCCATAGATAATAGAGTAGCAA 59.821 40.741 0.00 0.00 0.00 3.91
6030 6748 6.663953 GGTGTCCCATAGATAATAGAGTAGCA 59.336 42.308 0.00 0.00 0.00 3.49
6031 6749 6.893005 AGGTGTCCCATAGATAATAGAGTAGC 59.107 42.308 0.00 0.00 0.00 3.58
6032 6750 9.976776 TTAGGTGTCCCATAGATAATAGAGTAG 57.023 37.037 0.00 0.00 0.00 2.57
6034 6752 9.670442 TTTTAGGTGTCCCATAGATAATAGAGT 57.330 33.333 0.00 0.00 0.00 3.24
6041 6759 9.046846 CCTATGATTTTAGGTGTCCCATAGATA 57.953 37.037 0.00 0.00 36.02 1.98
6042 6760 7.529560 GCCTATGATTTTAGGTGTCCCATAGAT 60.530 40.741 0.00 0.00 40.83 1.98
6043 6761 6.239887 GCCTATGATTTTAGGTGTCCCATAGA 60.240 42.308 0.00 0.00 40.83 1.98
6044 6762 5.940470 GCCTATGATTTTAGGTGTCCCATAG 59.060 44.000 0.00 0.00 40.83 2.23
6045 6763 5.371176 TGCCTATGATTTTAGGTGTCCCATA 59.629 40.000 0.00 0.00 40.83 2.74
6046 6764 4.167892 TGCCTATGATTTTAGGTGTCCCAT 59.832 41.667 0.00 0.00 40.83 4.00
6047 6765 3.525609 TGCCTATGATTTTAGGTGTCCCA 59.474 43.478 0.00 0.00 40.83 4.37
6048 6766 4.164843 TGCCTATGATTTTAGGTGTCCC 57.835 45.455 0.00 0.00 40.83 4.46
6049 6767 5.193679 ACTTGCCTATGATTTTAGGTGTCC 58.806 41.667 0.00 0.00 40.83 4.02
6050 6768 6.404734 CCAACTTGCCTATGATTTTAGGTGTC 60.405 42.308 0.00 0.00 40.83 3.67
6051 6769 5.418840 CCAACTTGCCTATGATTTTAGGTGT 59.581 40.000 0.00 0.00 40.83 4.16
6052 6770 5.418840 ACCAACTTGCCTATGATTTTAGGTG 59.581 40.000 0.00 0.00 40.83 4.00
6053 6771 5.580022 ACCAACTTGCCTATGATTTTAGGT 58.420 37.500 0.00 0.00 40.83 3.08
6054 6772 6.332630 CAACCAACTTGCCTATGATTTTAGG 58.667 40.000 0.00 0.00 41.54 2.69
6111 6829 9.338622 GGCATTTAGTTATGTACAGGTAAATCT 57.661 33.333 0.33 0.00 0.00 2.40
6117 6835 5.357032 GCTTGGCATTTAGTTATGTACAGGT 59.643 40.000 0.33 0.00 0.00 4.00
6136 6854 1.410153 AGCCAAAGTGTTCAAGCTTGG 59.590 47.619 25.73 8.76 0.00 3.61
6137 6855 2.159198 ACAGCCAAAGTGTTCAAGCTTG 60.159 45.455 20.81 20.81 0.00 4.01
6138 6856 2.102578 ACAGCCAAAGTGTTCAAGCTT 58.897 42.857 0.00 0.00 0.00 3.74
6155 6873 4.940046 AGGATGTATTTGTCAGCTCAACAG 59.060 41.667 0.00 0.00 0.00 3.16
6156 6874 4.910195 AGGATGTATTTGTCAGCTCAACA 58.090 39.130 0.00 0.00 0.00 3.33
6157 6875 5.886960 AAGGATGTATTTGTCAGCTCAAC 57.113 39.130 0.00 0.00 0.00 3.18
6170 6888 8.470002 GGAAAGCTGTGAATAAAAAGGATGTAT 58.530 33.333 0.00 0.00 0.00 2.29
6172 6890 6.295292 GGGAAAGCTGTGAATAAAAAGGATGT 60.295 38.462 0.00 0.00 0.00 3.06
6207 6932 2.115910 TCTTTGCAGGGCCACCAG 59.884 61.111 6.18 0.00 40.13 4.00
6286 7011 1.748493 TGGTTTTGCGATGCCTTATCC 59.252 47.619 0.00 0.00 31.82 2.59
6298 7023 1.271102 TGGGCGATTACTTGGTTTTGC 59.729 47.619 0.00 0.00 0.00 3.68
6304 7029 2.017049 CTTTCCTGGGCGATTACTTGG 58.983 52.381 0.00 0.00 0.00 3.61
6314 7039 1.372087 CTGCGTGATCTTTCCTGGGC 61.372 60.000 0.00 0.00 0.00 5.36
6330 7055 3.446175 GAGCTCGAAATGCGGCTGC 62.446 63.158 11.65 11.65 43.33 5.25
6393 7121 1.153005 GGCTGAGCTGGGATCCTTG 60.153 63.158 12.58 5.94 0.00 3.61
6394 7122 0.918310 AAGGCTGAGCTGGGATCCTT 60.918 55.000 12.58 0.00 0.00 3.36
6405 7133 1.123928 AACCCCGATAGAAGGCTGAG 58.876 55.000 0.00 0.00 39.76 3.35
6520 7248 4.450419 CCATGTCAAGACTGAAGACAGAAC 59.550 45.833 10.29 0.00 44.51 3.01
6596 7324 1.302285 CTGTGGCCCTGAGAATGCT 59.698 57.895 0.00 0.00 0.00 3.79
6700 7428 2.413142 GCCACATTCCCTCTGCTGC 61.413 63.158 0.00 0.00 0.00 5.25
6701 7429 1.001764 TGCCACATTCCCTCTGCTG 60.002 57.895 0.00 0.00 0.00 4.41
6702 7430 1.001641 GTGCCACATTCCCTCTGCT 60.002 57.895 0.00 0.00 0.00 4.24
6776 7504 5.463286 TGCATTTGCTGACACTTCTATTTG 58.537 37.500 3.94 0.00 42.66 2.32
6818 7546 5.080337 ACAAGATCTGGTGAGACTCTGTTA 58.920 41.667 0.59 0.00 0.00 2.41
6927 7681 1.378119 CTGCTGGAGCTTCATGGCA 60.378 57.895 8.53 8.53 42.66 4.92
6968 7725 2.750637 GCCACATCTGCTGCTGCT 60.751 61.111 17.00 0.00 40.48 4.24
6969 7726 3.052620 CTGCCACATCTGCTGCTGC 62.053 63.158 8.89 8.89 40.20 5.25
6970 7727 0.392060 TACTGCCACATCTGCTGCTG 60.392 55.000 0.00 0.00 0.00 4.41
7221 7981 0.178950 TCACTCTCTCACTGGCCAGT 60.179 55.000 33.20 33.20 43.61 4.00
7222 7982 0.531657 CTCACTCTCTCACTGGCCAG 59.468 60.000 31.60 31.60 0.00 4.85
7223 7983 0.902048 CCTCACTCTCTCACTGGCCA 60.902 60.000 4.71 4.71 0.00 5.36
7224 7984 0.902516 ACCTCACTCTCTCACTGGCC 60.903 60.000 0.00 0.00 0.00 5.36
7225 7985 0.246086 CACCTCACTCTCTCACTGGC 59.754 60.000 0.00 0.00 0.00 4.85
7226 7986 1.626686 ACACCTCACTCTCTCACTGG 58.373 55.000 0.00 0.00 0.00 4.00
7227 7987 3.680490 TCTACACCTCACTCTCTCACTG 58.320 50.000 0.00 0.00 0.00 3.66
7241 8001 9.157104 CTCCTTTCTTTCTTTAAGATCTACACC 57.843 37.037 0.00 0.00 42.32 4.16
7287 8048 2.215196 TGTCAGGTCAAAGTAAACGCC 58.785 47.619 0.00 0.00 0.00 5.68
7308 8069 3.340814 TTTCTGAGAACCATCCTCTGC 57.659 47.619 0.00 0.00 32.03 4.26
7323 8084 5.062934 TCACACGACCGCTATAATTTTTCTG 59.937 40.000 0.00 0.00 0.00 3.02
7328 8089 4.270084 CACATCACACGACCGCTATAATTT 59.730 41.667 0.00 0.00 0.00 1.82
7338 8099 2.032894 CACAAAGTCACATCACACGACC 60.033 50.000 0.00 0.00 0.00 4.79
7356 8117 0.829990 TCAGCCACTCACAAGTCACA 59.170 50.000 0.00 0.00 31.71 3.58
7357 8118 1.506493 CTCAGCCACTCACAAGTCAC 58.494 55.000 0.00 0.00 31.71 3.67
7519 8280 7.066284 ACTCCCTTCAATTCTATCGAAAACATG 59.934 37.037 0.00 0.00 31.91 3.21
7520 8281 7.112779 ACTCCCTTCAATTCTATCGAAAACAT 58.887 34.615 0.00 0.00 31.91 2.71
7521 8282 6.472887 ACTCCCTTCAATTCTATCGAAAACA 58.527 36.000 0.00 0.00 31.91 2.83
7522 8283 6.986904 ACTCCCTTCAATTCTATCGAAAAC 57.013 37.500 0.00 0.00 31.91 2.43
7527 8288 4.635765 TGCAAACTCCCTTCAATTCTATCG 59.364 41.667 0.00 0.00 0.00 2.92
7632 8393 2.812358 ACGAAAAATGGTGGGCTTTC 57.188 45.000 0.00 0.00 0.00 2.62
7692 8453 4.211164 TGTCAGTTATCTTGTCAAAGCACG 59.789 41.667 0.00 0.00 33.06 5.34
7695 8456 6.902341 TCATTGTCAGTTATCTTGTCAAAGC 58.098 36.000 0.00 0.00 33.06 3.51
7696 8457 8.226448 GTCTCATTGTCAGTTATCTTGTCAAAG 58.774 37.037 0.00 0.00 34.45 2.77
7700 8461 6.166279 TGGTCTCATTGTCAGTTATCTTGTC 58.834 40.000 0.00 0.00 0.00 3.18
7702 8463 5.583854 CCTGGTCTCATTGTCAGTTATCTTG 59.416 44.000 0.00 0.00 0.00 3.02
7704 8465 4.780021 ACCTGGTCTCATTGTCAGTTATCT 59.220 41.667 0.00 0.00 0.00 1.98
7714 8475 0.883833 GTGGCAACCTGGTCTCATTG 59.116 55.000 0.00 0.00 0.00 2.82
7716 8477 1.003355 CGTGGCAACCTGGTCTCAT 60.003 57.895 0.00 0.00 0.00 2.90
7741 8502 1.737838 ACGATCGTTACCTCGTACCA 58.262 50.000 16.60 0.00 45.55 3.25
7742 8503 2.832672 AACGATCGTTACCTCGTACC 57.167 50.000 30.88 0.00 46.59 3.34
7743 8504 4.509891 GTCTAACGATCGTTACCTCGTAC 58.490 47.826 31.34 19.15 46.59 3.67
7744 8505 3.242944 CGTCTAACGATCGTTACCTCGTA 59.757 47.826 31.34 15.40 46.59 3.43
7745 8506 4.223743 TCGTCTAACGATCGTTACCTCGT 61.224 47.826 31.34 13.40 46.73 4.18
7746 8507 2.282555 TCGTCTAACGATCGTTACCTCG 59.717 50.000 31.34 29.61 46.73 4.63
7747 8508 3.933155 TCGTCTAACGATCGTTACCTC 57.067 47.619 31.34 22.39 46.73 3.85
7768 8529 4.881850 GCTAGAGTTGCTTTAAAGGGCATA 59.118 41.667 16.78 0.02 38.30 3.14
7771 8532 3.081804 TGCTAGAGTTGCTTTAAAGGGC 58.918 45.455 16.78 4.97 0.00 5.19
7772 8533 4.072131 TGTGCTAGAGTTGCTTTAAAGGG 58.928 43.478 16.78 0.00 0.00 3.95
7775 8536 3.818773 GGGTGTGCTAGAGTTGCTTTAAA 59.181 43.478 0.00 0.00 0.00 1.52
7778 8539 1.545651 GGGGTGTGCTAGAGTTGCTTT 60.546 52.381 0.00 0.00 0.00 3.51
7780 8541 1.679898 GGGGTGTGCTAGAGTTGCT 59.320 57.895 0.00 0.00 0.00 3.91
7781 8542 1.741770 CGGGGTGTGCTAGAGTTGC 60.742 63.158 0.00 0.00 0.00 4.17
7836 8597 0.943835 GCCCGCAAAAGCGATTTTGT 60.944 50.000 32.12 2.56 42.30 2.83
7861 8632 9.769677 AGCATATTTATACTGGGTCTACATCTA 57.230 33.333 0.00 0.00 0.00 1.98
7987 8785 6.974932 TCTAATGTTGTTGCAAAAGCAAAA 57.025 29.167 10.43 1.97 0.00 2.44
8044 8842 6.203915 GTGGTTCTTGTTTTCTTTGGTTTTGT 59.796 34.615 0.00 0.00 0.00 2.83
8087 8886 6.377146 GGGAGCAGTTATGAAAGTTGGAAATA 59.623 38.462 0.00 0.00 0.00 1.40
8336 9135 1.751351 TGTAGGACGAAGGATGCTCAG 59.249 52.381 0.00 0.00 0.00 3.35
8412 9225 0.606401 ATGTGCACTTGCGGTAGCTT 60.606 50.000 19.41 0.00 45.83 3.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.