Multiple sequence alignment - TraesCS6A01G064800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G064800 chr6A 100.000 2602 0 0 1 2602 34324978 34322377 0.000000e+00 4806
1 TraesCS6A01G064800 chr6A 87.541 305 24 8 229 526 34268188 34267891 8.920000e-90 340
2 TraesCS6A01G064800 chr6A 98.630 73 1 0 3 75 66678172 66678244 2.100000e-26 130
3 TraesCS6A01G064800 chr6A 92.045 88 6 1 5 92 190470606 190470520 3.520000e-24 122
4 TraesCS6A01G064800 chr4A 94.998 2079 81 6 526 2602 641474765 641476822 0.000000e+00 3241
5 TraesCS6A01G064800 chr4A 93.669 1785 109 4 820 2602 734360321 734362103 0.000000e+00 2667
6 TraesCS6A01G064800 chr4A 92.532 308 18 3 526 829 734359973 734360279 1.110000e-118 436
7 TraesCS6A01G064800 chr4A 95.181 83 4 0 3 85 112402698 112402616 5.840000e-27 132
8 TraesCS6A01G064800 chr4A 98.630 73 1 0 3 75 22778858 22778930 2.100000e-26 130
9 TraesCS6A01G064800 chr5B 90.565 2088 163 26 526 2602 599380796 599378732 0.000000e+00 2734
10 TraesCS6A01G064800 chr5B 88.487 304 32 2 526 829 698441157 698441457 5.290000e-97 364
11 TraesCS6A01G064800 chr1B 93.270 1783 115 5 820 2600 566444227 566446006 0.000000e+00 2623
12 TraesCS6A01G064800 chr1B 90.228 307 28 2 523 829 566443881 566444185 1.450000e-107 399
13 TraesCS6A01G064800 chr3B 92.342 1789 128 6 820 2602 809547784 809545999 0.000000e+00 2536
14 TraesCS6A01G064800 chr3B 91.846 1815 126 16 805 2602 395900330 395902139 0.000000e+00 2512
15 TraesCS6A01G064800 chr3B 89.508 305 31 1 525 829 809548129 809547826 4.060000e-103 385
16 TraesCS6A01G064800 chr3B 89.180 305 29 2 525 829 395900003 395900303 6.800000e-101 377
17 TraesCS6A01G064800 chr3B 88.125 160 15 4 75 232 780135271 780135114 1.230000e-43 187
18 TraesCS6A01G064800 chr3B 83.744 203 26 3 277 479 780292171 780291976 4.420000e-43 185
19 TraesCS6A01G064800 chr3B 85.849 106 12 3 75 178 780084324 780084220 2.740000e-20 110
20 TraesCS6A01G064800 chr6B 91.377 1786 136 6 820 2602 2207493 2205723 0.000000e+00 2429
21 TraesCS6A01G064800 chr6B 91.361 1771 147 6 820 2588 9291673 9289907 0.000000e+00 2418
22 TraesCS6A01G064800 chr6B 88.660 291 22 8 545 829 9292000 9291715 6.890000e-91 344
23 TraesCS6A01G064800 chr6B 87.549 257 17 4 80 336 62673887 62673646 1.520000e-72 283
24 TraesCS6A01G064800 chr6B 88.618 123 12 1 361 483 62676729 62676609 5.800000e-32 148
25 TraesCS6A01G064800 chr6B 88.618 123 12 1 361 483 62681276 62681156 5.800000e-32 148
26 TraesCS6A01G064800 chr6B 88.618 123 12 1 361 483 62685895 62685775 5.800000e-32 148
27 TraesCS6A01G064800 chr5A 93.542 1626 84 9 525 2146 547556458 547558066 0.000000e+00 2401
28 TraesCS6A01G064800 chr5A 97.605 167 4 0 526 692 547587267 547587433 1.180000e-73 287
29 TraesCS6A01G064800 chr1D 90.655 1787 147 8 821 2602 463447077 463448848 0.000000e+00 2357
30 TraesCS6A01G064800 chrUn 87.336 458 34 13 74 528 101981743 101981307 1.070000e-138 503
31 TraesCS6A01G064800 chrUn 90.090 111 9 2 123 232 41701687 41701796 2.700000e-30 143
32 TraesCS6A01G064800 chr7A 100.000 75 0 0 1 75 559597792 559597866 3.490000e-29 139
33 TraesCS6A01G064800 chr7A 97.403 77 1 1 3 78 176915400 176915324 2.100000e-26 130
34 TraesCS6A01G064800 chr3A 98.667 75 1 0 1 75 528041014 528041088 1.620000e-27 134
35 TraesCS6A01G064800 chr3A 98.630 73 1 0 3 75 173135993 173136065 2.100000e-26 130
36 TraesCS6A01G064800 chr1A 95.181 83 4 0 3 85 344646022 344646104 5.840000e-27 132


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G064800 chr6A 34322377 34324978 2601 True 4806.0 4806 100.0000 1 2602 1 chr6A.!!$R2 2601
1 TraesCS6A01G064800 chr4A 641474765 641476822 2057 False 3241.0 3241 94.9980 526 2602 1 chr4A.!!$F2 2076
2 TraesCS6A01G064800 chr4A 734359973 734362103 2130 False 1551.5 2667 93.1005 526 2602 2 chr4A.!!$F3 2076
3 TraesCS6A01G064800 chr5B 599378732 599380796 2064 True 2734.0 2734 90.5650 526 2602 1 chr5B.!!$R1 2076
4 TraesCS6A01G064800 chr1B 566443881 566446006 2125 False 1511.0 2623 91.7490 523 2600 2 chr1B.!!$F1 2077
5 TraesCS6A01G064800 chr3B 809545999 809548129 2130 True 1460.5 2536 90.9250 525 2602 2 chr3B.!!$R4 2077
6 TraesCS6A01G064800 chr3B 395900003 395902139 2136 False 1444.5 2512 90.5130 525 2602 2 chr3B.!!$F1 2077
7 TraesCS6A01G064800 chr6B 2205723 2207493 1770 True 2429.0 2429 91.3770 820 2602 1 chr6B.!!$R1 1782
8 TraesCS6A01G064800 chr6B 9289907 9292000 2093 True 1381.0 2418 90.0105 545 2588 2 chr6B.!!$R4 2043
9 TraesCS6A01G064800 chr6B 62673646 62676729 3083 True 215.5 283 88.0835 80 483 2 chr6B.!!$R5 403
10 TraesCS6A01G064800 chr5A 547556458 547558066 1608 False 2401.0 2401 93.5420 525 2146 1 chr5A.!!$F1 1621
11 TraesCS6A01G064800 chr1D 463447077 463448848 1771 False 2357.0 2357 90.6550 821 2602 1 chr1D.!!$F1 1781

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
199 200 0.036010 AACTGTTGATCCAGGGAGCG 60.036 55.0 0.0 0.0 36.75 5.03 F
624 625 0.037326 CTGCGTGCCTACTTCCTTGA 60.037 55.0 0.0 0.0 0.00 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1349 1779 1.371558 GAGGCCGTGGAGAAACTGT 59.628 57.895 0.0 0.0 0.0 3.55 R
2338 3099 1.263356 CGTGAAAGGGGTAGAGGTCA 58.737 55.000 0.0 0.0 0.0 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 2.583593 GGAGATCTCCGTGCGCAC 60.584 66.667 30.42 30.42 40.36 5.34
29 30 2.583593 GAGATCTCCGTGCGCACC 60.584 66.667 33.23 18.62 0.00 5.01
30 31 4.148825 AGATCTCCGTGCGCACCC 62.149 66.667 33.23 11.71 0.00 4.61
38 39 3.660111 GTGCGCACCCCAGTGTTC 61.660 66.667 30.12 0.00 46.35 3.18
40 41 4.980805 GCGCACCCCAGTGTTCGA 62.981 66.667 0.30 0.00 46.35 3.71
41 42 2.280524 CGCACCCCAGTGTTCGAA 60.281 61.111 0.00 0.00 46.35 3.71
42 43 2.604174 CGCACCCCAGTGTTCGAAC 61.604 63.158 21.42 21.42 46.35 3.95
43 44 2.258726 GCACCCCAGTGTTCGAACC 61.259 63.158 24.78 15.84 46.35 3.62
44 45 1.450211 CACCCCAGTGTTCGAACCT 59.550 57.895 24.78 17.73 39.30 3.50
45 46 0.602905 CACCCCAGTGTTCGAACCTC 60.603 60.000 24.78 17.20 39.30 3.85
46 47 1.052124 ACCCCAGTGTTCGAACCTCA 61.052 55.000 24.78 4.24 0.00 3.86
47 48 0.107831 CCCCAGTGTTCGAACCTCAA 59.892 55.000 24.78 3.77 0.00 3.02
48 49 1.512926 CCCAGTGTTCGAACCTCAAG 58.487 55.000 24.78 13.60 0.00 3.02
49 50 1.512926 CCAGTGTTCGAACCTCAAGG 58.487 55.000 24.78 17.67 42.17 3.61
50 51 1.512926 CAGTGTTCGAACCTCAAGGG 58.487 55.000 24.78 6.32 40.27 3.95
59 60 3.003173 CCTCAAGGGTCTGCCGGA 61.003 66.667 5.05 0.00 34.97 5.14
60 61 2.592993 CCTCAAGGGTCTGCCGGAA 61.593 63.158 5.05 0.00 34.97 4.30
61 62 1.376037 CTCAAGGGTCTGCCGGAAC 60.376 63.158 5.05 0.00 34.97 3.62
74 75 2.426887 GGAACCCGAAACCCGACA 59.573 61.111 0.00 0.00 41.76 4.35
75 76 1.962822 GGAACCCGAAACCCGACAC 60.963 63.158 0.00 0.00 41.76 3.67
76 77 2.280321 AACCCGAAACCCGACACG 60.280 61.111 0.00 0.00 41.76 4.49
86 87 2.654289 CCGACACGGGTCATGTCA 59.346 61.111 19.62 0.00 45.64 3.58
87 88 1.005512 CCGACACGGGTCATGTCAA 60.006 57.895 19.62 0.00 45.64 3.18
88 89 0.601576 CCGACACGGGTCATGTCAAA 60.602 55.000 19.62 0.00 45.64 2.69
89 90 0.790207 CGACACGGGTCATGTCAAAG 59.210 55.000 19.62 0.00 45.64 2.77
90 91 0.517316 GACACGGGTCATGTCAAAGC 59.483 55.000 14.30 0.00 44.87 3.51
91 92 0.179032 ACACGGGTCATGTCAAAGCA 60.179 50.000 0.00 0.00 0.00 3.91
92 93 0.950836 CACGGGTCATGTCAAAGCAA 59.049 50.000 0.00 0.00 0.00 3.91
93 94 0.951558 ACGGGTCATGTCAAAGCAAC 59.048 50.000 0.00 0.00 0.00 4.17
94 95 1.238439 CGGGTCATGTCAAAGCAACT 58.762 50.000 0.00 0.00 0.00 3.16
95 96 1.608590 CGGGTCATGTCAAAGCAACTT 59.391 47.619 0.00 0.00 0.00 2.66
96 97 2.605338 CGGGTCATGTCAAAGCAACTTG 60.605 50.000 0.00 0.00 0.00 3.16
97 98 2.397549 GGTCATGTCAAAGCAACTTGC 58.602 47.619 5.55 5.55 45.46 4.01
106 107 2.721231 GCAACTTGCTGTGCCGAA 59.279 55.556 6.50 0.00 40.96 4.30
107 108 1.658409 GCAACTTGCTGTGCCGAAC 60.658 57.895 6.50 0.00 40.96 3.95
108 109 1.726865 CAACTTGCTGTGCCGAACA 59.273 52.632 0.00 0.00 37.22 3.18
109 110 0.311790 CAACTTGCTGTGCCGAACAT 59.688 50.000 0.00 0.00 38.39 2.71
110 111 1.032014 AACTTGCTGTGCCGAACATT 58.968 45.000 0.00 0.00 38.39 2.71
111 112 0.311790 ACTTGCTGTGCCGAACATTG 59.688 50.000 0.00 0.00 38.39 2.82
112 113 0.387622 CTTGCTGTGCCGAACATTGG 60.388 55.000 0.00 0.00 38.39 3.16
121 122 3.140814 GAACATTGGCGGGCCCTC 61.141 66.667 22.43 13.01 34.56 4.30
130 131 4.214327 CGGGCCCTCGCTTCTCTC 62.214 72.222 22.43 0.00 34.44 3.20
131 132 3.077556 GGGCCCTCGCTTCTCTCA 61.078 66.667 17.04 0.00 34.44 3.27
132 133 2.498726 GGCCCTCGCTTCTCTCAG 59.501 66.667 0.00 0.00 34.44 3.35
133 134 2.202864 GCCCTCGCTTCTCTCAGC 60.203 66.667 0.00 0.00 36.33 4.26
140 141 2.013021 GCTTCTCTCAGCGCATTCC 58.987 57.895 11.47 0.00 0.00 3.01
141 142 0.742281 GCTTCTCTCAGCGCATTCCA 60.742 55.000 11.47 0.00 0.00 3.53
142 143 1.950828 CTTCTCTCAGCGCATTCCAT 58.049 50.000 11.47 0.00 0.00 3.41
143 144 2.804572 GCTTCTCTCAGCGCATTCCATA 60.805 50.000 11.47 0.00 0.00 2.74
144 145 3.461061 CTTCTCTCAGCGCATTCCATAA 58.539 45.455 11.47 0.00 0.00 1.90
145 146 2.826428 TCTCTCAGCGCATTCCATAAC 58.174 47.619 11.47 0.00 0.00 1.89
146 147 2.432146 TCTCTCAGCGCATTCCATAACT 59.568 45.455 11.47 0.00 0.00 2.24
147 148 2.543012 CTCTCAGCGCATTCCATAACTG 59.457 50.000 11.47 0.00 0.00 3.16
148 149 2.168313 TCTCAGCGCATTCCATAACTGA 59.832 45.455 11.47 0.00 33.42 3.41
149 150 2.938451 CTCAGCGCATTCCATAACTGAA 59.062 45.455 11.47 0.00 34.05 3.02
150 151 2.938451 TCAGCGCATTCCATAACTGAAG 59.062 45.455 11.47 0.00 31.60 3.02
151 152 2.938451 CAGCGCATTCCATAACTGAAGA 59.062 45.455 11.47 0.00 0.00 2.87
152 153 3.002042 CAGCGCATTCCATAACTGAAGAG 59.998 47.826 11.47 0.00 0.00 2.85
153 154 2.289002 GCGCATTCCATAACTGAAGAGG 59.711 50.000 0.30 0.00 0.00 3.69
154 155 3.797039 CGCATTCCATAACTGAAGAGGA 58.203 45.455 0.00 0.00 0.00 3.71
155 156 3.806521 CGCATTCCATAACTGAAGAGGAG 59.193 47.826 0.00 0.00 0.00 3.69
156 157 3.563390 GCATTCCATAACTGAAGAGGAGC 59.437 47.826 0.00 0.00 0.00 4.70
157 158 4.774124 CATTCCATAACTGAAGAGGAGCA 58.226 43.478 0.00 0.00 0.00 4.26
158 159 4.908601 TTCCATAACTGAAGAGGAGCAA 57.091 40.909 0.00 0.00 0.00 3.91
159 160 5.441718 TTCCATAACTGAAGAGGAGCAAT 57.558 39.130 0.00 0.00 0.00 3.56
160 161 5.441718 TCCATAACTGAAGAGGAGCAATT 57.558 39.130 0.00 0.00 0.00 2.32
161 162 5.188434 TCCATAACTGAAGAGGAGCAATTG 58.812 41.667 0.00 0.00 0.00 2.32
162 163 4.201990 CCATAACTGAAGAGGAGCAATTGC 60.202 45.833 23.05 23.05 42.49 3.56
163 164 1.831580 ACTGAAGAGGAGCAATTGCC 58.168 50.000 26.45 17.19 43.38 4.52
164 165 0.731417 CTGAAGAGGAGCAATTGCCG 59.269 55.000 26.45 3.04 43.38 5.69
165 166 0.677731 TGAAGAGGAGCAATTGCCGG 60.678 55.000 26.45 0.00 43.38 6.13
166 167 1.997928 GAAGAGGAGCAATTGCCGGC 61.998 60.000 26.45 22.73 43.38 6.13
167 168 2.751436 GAGGAGCAATTGCCGGCA 60.751 61.111 29.03 29.03 43.38 5.69
168 169 2.283101 AGGAGCAATTGCCGGCAA 60.283 55.556 41.54 41.54 43.38 4.52
170 171 1.227060 GGAGCAATTGCCGGCAATC 60.227 57.895 45.33 35.14 44.86 2.67
171 172 1.587088 GAGCAATTGCCGGCAATCG 60.587 57.895 45.33 38.60 44.86 3.34
172 173 1.992233 GAGCAATTGCCGGCAATCGA 61.992 55.000 45.33 26.90 44.86 3.59
173 174 1.587088 GCAATTGCCGGCAATCGAG 60.587 57.895 45.33 36.58 44.86 4.04
174 175 1.802636 CAATTGCCGGCAATCGAGT 59.197 52.632 45.33 31.44 44.86 4.18
175 176 0.171007 CAATTGCCGGCAATCGAGTT 59.829 50.000 45.33 31.62 44.86 3.01
176 177 0.171007 AATTGCCGGCAATCGAGTTG 59.829 50.000 45.33 0.00 44.86 3.16
177 178 1.656818 ATTGCCGGCAATCGAGTTGG 61.657 55.000 41.98 0.00 42.32 3.77
178 179 2.435938 GCCGGCAATCGAGTTGGA 60.436 61.111 24.80 0.00 42.43 3.53
179 180 2.750888 GCCGGCAATCGAGTTGGAC 61.751 63.158 24.80 0.00 42.43 4.02
180 181 1.375396 CCGGCAATCGAGTTGGACA 60.375 57.895 0.00 0.00 42.43 4.02
181 182 0.953471 CCGGCAATCGAGTTGGACAA 60.953 55.000 0.00 0.00 42.43 3.18
182 183 0.165944 CGGCAATCGAGTTGGACAAC 59.834 55.000 7.08 7.08 42.43 3.32
193 194 3.904136 GTTGGACAACTGTTGATCCAG 57.096 47.619 27.57 7.89 39.89 3.86
194 195 2.554032 GTTGGACAACTGTTGATCCAGG 59.446 50.000 27.57 7.33 39.89 4.45
195 196 1.073763 TGGACAACTGTTGATCCAGGG 59.926 52.381 26.53 5.16 36.56 4.45
196 197 1.351017 GGACAACTGTTGATCCAGGGA 59.649 52.381 26.00 0.00 36.75 4.20
197 198 2.616510 GGACAACTGTTGATCCAGGGAG 60.617 54.545 26.00 0.00 36.75 4.30
198 199 1.271597 ACAACTGTTGATCCAGGGAGC 60.272 52.381 26.00 0.00 36.75 4.70
199 200 0.036010 AACTGTTGATCCAGGGAGCG 60.036 55.000 0.00 0.00 36.75 5.03
200 201 1.153289 CTGTTGATCCAGGGAGCGG 60.153 63.158 0.00 0.00 32.52 5.52
201 202 1.612146 TGTTGATCCAGGGAGCGGA 60.612 57.895 0.00 0.00 36.84 5.54
202 203 1.144936 GTTGATCCAGGGAGCGGAG 59.855 63.158 0.00 0.00 35.56 4.63
203 204 1.306141 TTGATCCAGGGAGCGGAGT 60.306 57.895 0.00 0.00 35.56 3.85
204 205 1.330655 TTGATCCAGGGAGCGGAGTC 61.331 60.000 0.00 0.00 35.56 3.36
205 206 2.835431 ATCCAGGGAGCGGAGTCG 60.835 66.667 0.00 0.00 35.56 4.18
206 207 3.360423 ATCCAGGGAGCGGAGTCGA 62.360 63.158 0.00 0.00 39.00 4.20
207 208 2.648613 ATCCAGGGAGCGGAGTCGAT 62.649 60.000 0.00 0.00 39.00 3.59
208 209 2.415010 CAGGGAGCGGAGTCGATG 59.585 66.667 0.00 0.00 39.00 3.84
209 210 2.043852 AGGGAGCGGAGTCGATGT 60.044 61.111 0.00 0.00 39.00 3.06
210 211 1.682684 AGGGAGCGGAGTCGATGTT 60.683 57.895 0.00 0.00 39.00 2.71
211 212 1.227002 GGGAGCGGAGTCGATGTTC 60.227 63.158 0.00 0.00 39.00 3.18
212 213 1.668101 GGGAGCGGAGTCGATGTTCT 61.668 60.000 0.00 0.00 39.00 3.01
213 214 0.526524 GGAGCGGAGTCGATGTTCTG 60.527 60.000 0.00 0.00 39.00 3.02
214 215 0.171455 GAGCGGAGTCGATGTTCTGT 59.829 55.000 0.00 0.00 39.00 3.41
215 216 0.603569 AGCGGAGTCGATGTTCTGTT 59.396 50.000 0.00 0.00 39.00 3.16
216 217 0.992802 GCGGAGTCGATGTTCTGTTC 59.007 55.000 0.00 0.00 39.00 3.18
217 218 1.668919 GCGGAGTCGATGTTCTGTTCA 60.669 52.381 0.00 0.00 39.00 3.18
218 219 2.254459 CGGAGTCGATGTTCTGTTCAG 58.746 52.381 0.00 0.00 39.00 3.02
219 220 2.611518 GGAGTCGATGTTCTGTTCAGG 58.388 52.381 0.00 0.00 0.00 3.86
220 221 2.231478 GGAGTCGATGTTCTGTTCAGGA 59.769 50.000 0.00 0.00 0.00 3.86
221 222 3.246619 GAGTCGATGTTCTGTTCAGGAC 58.753 50.000 4.44 4.44 0.00 3.85
222 223 2.628178 AGTCGATGTTCTGTTCAGGACA 59.372 45.455 15.10 15.10 36.65 4.02
223 224 3.259374 AGTCGATGTTCTGTTCAGGACAT 59.741 43.478 22.10 22.10 37.69 3.06
224 225 3.997021 GTCGATGTTCTGTTCAGGACATT 59.003 43.478 22.60 10.57 37.69 2.71
225 226 3.996363 TCGATGTTCTGTTCAGGACATTG 59.004 43.478 24.81 24.81 37.69 2.82
226 227 3.996363 CGATGTTCTGTTCAGGACATTGA 59.004 43.478 25.85 4.15 37.69 2.57
227 228 4.633126 CGATGTTCTGTTCAGGACATTGAT 59.367 41.667 25.85 9.39 37.69 2.57
228 229 5.220548 CGATGTTCTGTTCAGGACATTGATC 60.221 44.000 25.85 15.12 37.69 2.92
229 230 4.326826 TGTTCTGTTCAGGACATTGATCC 58.673 43.478 9.58 0.00 37.69 3.36
230 231 4.202451 TGTTCTGTTCAGGACATTGATCCA 60.202 41.667 9.58 0.00 41.73 3.41
231 232 4.212143 TCTGTTCAGGACATTGATCCAG 57.788 45.455 0.00 0.00 41.73 3.86
232 233 3.584406 TCTGTTCAGGACATTGATCCAGT 59.416 43.478 0.00 0.00 41.73 4.00
233 234 4.042062 TCTGTTCAGGACATTGATCCAGTT 59.958 41.667 0.00 0.00 41.73 3.16
234 235 4.074259 TGTTCAGGACATTGATCCAGTTG 58.926 43.478 7.66 0.08 41.73 3.16
235 236 2.715046 TCAGGACATTGATCCAGTTGC 58.285 47.619 7.66 0.00 41.73 4.17
236 237 2.040145 TCAGGACATTGATCCAGTTGCA 59.960 45.455 7.66 0.00 41.73 4.08
237 238 2.821378 CAGGACATTGATCCAGTTGCAA 59.179 45.455 0.00 0.00 41.73 4.08
238 239 3.446161 CAGGACATTGATCCAGTTGCAAT 59.554 43.478 0.59 0.00 41.73 3.56
239 240 4.081862 CAGGACATTGATCCAGTTGCAATT 60.082 41.667 0.59 0.00 41.73 2.32
240 241 5.125900 CAGGACATTGATCCAGTTGCAATTA 59.874 40.000 0.59 0.00 41.73 1.40
241 242 5.359009 AGGACATTGATCCAGTTGCAATTAG 59.641 40.000 0.59 0.00 41.73 1.73
242 243 5.002464 ACATTGATCCAGTTGCAATTAGC 57.998 39.130 0.59 0.00 45.96 3.09
243 244 8.290959 GGACATTGATCCAGTTGCAATTAGCA 62.291 42.308 0.59 0.00 44.72 3.49
244 245 9.954763 GGACATTGATCCAGTTGCAATTAGCAG 62.955 44.444 0.59 0.00 45.95 4.24
254 255 3.740044 GCAATTAGCAGTACGAAGCAA 57.260 42.857 9.95 4.04 44.79 3.91
255 256 3.417185 GCAATTAGCAGTACGAAGCAAC 58.583 45.455 9.95 0.00 44.79 4.17
256 257 3.125316 GCAATTAGCAGTACGAAGCAACT 59.875 43.478 9.95 0.00 44.79 3.16
257 258 4.328983 GCAATTAGCAGTACGAAGCAACTA 59.671 41.667 9.95 0.00 44.79 2.24
258 259 5.163893 GCAATTAGCAGTACGAAGCAACTAA 60.164 40.000 9.95 0.00 44.79 2.24
259 260 6.619874 GCAATTAGCAGTACGAAGCAACTAAA 60.620 38.462 9.95 0.00 44.79 1.85
260 261 7.295201 CAATTAGCAGTACGAAGCAACTAAAA 58.705 34.615 9.95 0.00 0.00 1.52
261 262 7.611213 ATTAGCAGTACGAAGCAACTAAAAT 57.389 32.000 9.95 0.00 0.00 1.82
262 263 5.532025 AGCAGTACGAAGCAACTAAAATC 57.468 39.130 9.95 0.00 0.00 2.17
263 264 5.238583 AGCAGTACGAAGCAACTAAAATCT 58.761 37.500 9.95 0.00 0.00 2.40
264 265 5.120830 AGCAGTACGAAGCAACTAAAATCTG 59.879 40.000 9.95 0.00 0.00 2.90
265 266 5.316770 CAGTACGAAGCAACTAAAATCTGC 58.683 41.667 0.00 0.00 36.29 4.26
266 267 4.994852 AGTACGAAGCAACTAAAATCTGCA 59.005 37.500 0.00 0.00 38.58 4.41
267 268 5.643777 AGTACGAAGCAACTAAAATCTGCAT 59.356 36.000 0.00 0.00 38.58 3.96
268 269 6.816640 AGTACGAAGCAACTAAAATCTGCATA 59.183 34.615 0.00 0.00 38.58 3.14
269 270 6.683974 ACGAAGCAACTAAAATCTGCATAT 57.316 33.333 0.00 0.00 38.58 1.78
270 271 6.719365 ACGAAGCAACTAAAATCTGCATATC 58.281 36.000 0.00 0.00 38.58 1.63
271 272 6.316140 ACGAAGCAACTAAAATCTGCATATCA 59.684 34.615 0.00 0.00 38.58 2.15
272 273 7.148255 ACGAAGCAACTAAAATCTGCATATCAA 60.148 33.333 0.00 0.00 38.58 2.57
273 274 7.859377 CGAAGCAACTAAAATCTGCATATCAAT 59.141 33.333 0.00 0.00 38.58 2.57
274 275 9.178427 GAAGCAACTAAAATCTGCATATCAATC 57.822 33.333 0.00 0.00 38.58 2.67
275 276 8.229253 AGCAACTAAAATCTGCATATCAATCA 57.771 30.769 0.00 0.00 38.58 2.57
276 277 8.350722 AGCAACTAAAATCTGCATATCAATCAG 58.649 33.333 0.00 0.00 38.58 2.90
277 278 8.347771 GCAACTAAAATCTGCATATCAATCAGA 58.652 33.333 0.00 0.00 40.62 3.27
280 281 8.512956 ACTAAAATCTGCATATCAATCAGATGC 58.487 33.333 4.93 0.00 44.21 3.91
281 282 7.526142 AAAATCTGCATATCAATCAGATGCT 57.474 32.000 7.52 0.00 44.21 3.79
282 283 6.745159 AATCTGCATATCAATCAGATGCTC 57.255 37.500 7.52 0.00 44.21 4.26
283 284 5.223449 TCTGCATATCAATCAGATGCTCA 57.777 39.130 7.52 0.00 45.04 4.26
284 285 4.995487 TCTGCATATCAATCAGATGCTCAC 59.005 41.667 7.52 0.00 45.04 3.51
285 286 4.070009 TGCATATCAATCAGATGCTCACC 58.930 43.478 7.52 0.00 45.04 4.02
286 287 4.070009 GCATATCAATCAGATGCTCACCA 58.930 43.478 0.00 0.00 42.19 4.17
287 288 4.154375 GCATATCAATCAGATGCTCACCAG 59.846 45.833 0.00 0.00 42.19 4.00
288 289 5.548406 CATATCAATCAGATGCTCACCAGA 58.452 41.667 0.00 0.00 37.57 3.86
289 290 4.708576 ATCAATCAGATGCTCACCAGAT 57.291 40.909 0.00 0.00 35.06 2.90
290 291 5.820404 ATCAATCAGATGCTCACCAGATA 57.180 39.130 0.00 0.00 35.06 1.98
291 292 5.619132 TCAATCAGATGCTCACCAGATAA 57.381 39.130 0.00 0.00 0.00 1.75
292 293 5.608449 TCAATCAGATGCTCACCAGATAAG 58.392 41.667 0.00 0.00 0.00 1.73
293 294 3.465742 TCAGATGCTCACCAGATAAGC 57.534 47.619 0.00 0.00 36.56 3.09
298 299 2.910199 TGCTCACCAGATAAGCATGTC 58.090 47.619 0.00 0.00 40.91 3.06
299 300 2.216898 GCTCACCAGATAAGCATGTCC 58.783 52.381 0.00 0.00 36.06 4.02
300 301 2.477825 CTCACCAGATAAGCATGTCCG 58.522 52.381 0.00 0.00 0.00 4.79
301 302 1.831106 TCACCAGATAAGCATGTCCGT 59.169 47.619 0.00 0.00 0.00 4.69
302 303 1.935873 CACCAGATAAGCATGTCCGTG 59.064 52.381 0.00 0.00 0.00 4.94
303 304 1.134401 ACCAGATAAGCATGTCCGTGG 60.134 52.381 0.00 0.00 0.00 4.94
304 305 1.138859 CCAGATAAGCATGTCCGTGGA 59.861 52.381 0.00 0.00 0.00 4.02
305 306 2.419990 CCAGATAAGCATGTCCGTGGAA 60.420 50.000 0.00 0.00 0.00 3.53
306 307 2.609459 CAGATAAGCATGTCCGTGGAAC 59.391 50.000 0.00 0.00 0.00 3.62
307 308 1.940613 GATAAGCATGTCCGTGGAACC 59.059 52.381 0.00 0.00 0.00 3.62
308 309 0.981183 TAAGCATGTCCGTGGAACCT 59.019 50.000 0.00 0.00 0.00 3.50
309 310 0.321653 AAGCATGTCCGTGGAACCTC 60.322 55.000 0.00 0.00 0.00 3.85
310 311 1.745489 GCATGTCCGTGGAACCTCC 60.745 63.158 0.00 0.00 36.96 4.30
311 312 1.676968 CATGTCCGTGGAACCTCCA 59.323 57.895 0.00 0.00 45.98 3.86
318 319 3.565214 TGGAACCTCCAGCGCCAA 61.565 61.111 2.29 0.00 42.67 4.52
319 320 2.747855 GGAACCTCCAGCGCCAAG 60.748 66.667 2.29 0.00 36.28 3.61
320 321 2.032681 GAACCTCCAGCGCCAAGT 59.967 61.111 2.29 0.00 0.00 3.16
321 322 2.032681 AACCTCCAGCGCCAAGTC 59.967 61.111 2.29 0.00 0.00 3.01
322 323 2.731691 GAACCTCCAGCGCCAAGTCA 62.732 60.000 2.29 0.00 0.00 3.41
323 324 2.032528 CCTCCAGCGCCAAGTCAA 59.967 61.111 2.29 0.00 0.00 3.18
324 325 2.328099 CCTCCAGCGCCAAGTCAAC 61.328 63.158 2.29 0.00 0.00 3.18
325 326 1.302033 CTCCAGCGCCAAGTCAACT 60.302 57.895 2.29 0.00 0.00 3.16
326 327 1.572085 CTCCAGCGCCAAGTCAACTG 61.572 60.000 2.29 0.00 0.00 3.16
327 328 1.893808 CCAGCGCCAAGTCAACTGT 60.894 57.895 2.29 0.00 0.00 3.55
328 329 1.447317 CCAGCGCCAAGTCAACTGTT 61.447 55.000 2.29 0.00 0.00 3.16
329 330 0.040958 CAGCGCCAAGTCAACTGTTC 60.041 55.000 2.29 0.00 0.00 3.18
330 331 1.166531 AGCGCCAAGTCAACTGTTCC 61.167 55.000 2.29 0.00 0.00 3.62
331 332 1.166531 GCGCCAAGTCAACTGTTCCT 61.167 55.000 0.00 0.00 0.00 3.36
332 333 1.308998 CGCCAAGTCAACTGTTCCTT 58.691 50.000 0.00 0.00 0.00 3.36
333 334 1.264288 CGCCAAGTCAACTGTTCCTTC 59.736 52.381 0.00 0.00 0.00 3.46
334 335 1.609072 GCCAAGTCAACTGTTCCTTCC 59.391 52.381 0.00 0.00 0.00 3.46
335 336 2.930950 CCAAGTCAACTGTTCCTTCCA 58.069 47.619 0.00 0.00 0.00 3.53
336 337 3.490348 CCAAGTCAACTGTTCCTTCCAT 58.510 45.455 0.00 0.00 0.00 3.41
337 338 3.503748 CCAAGTCAACTGTTCCTTCCATC 59.496 47.826 0.00 0.00 0.00 3.51
338 339 4.136796 CAAGTCAACTGTTCCTTCCATCA 58.863 43.478 0.00 0.00 0.00 3.07
339 340 4.013267 AGTCAACTGTTCCTTCCATCAG 57.987 45.455 0.00 0.00 0.00 2.90
340 341 2.485814 GTCAACTGTTCCTTCCATCAGC 59.514 50.000 0.00 0.00 0.00 4.26
341 342 2.106338 TCAACTGTTCCTTCCATCAGCA 59.894 45.455 0.00 0.00 0.00 4.41
342 343 2.886523 CAACTGTTCCTTCCATCAGCAA 59.113 45.455 0.00 0.00 0.00 3.91
343 344 3.446442 ACTGTTCCTTCCATCAGCAAT 57.554 42.857 0.00 0.00 0.00 3.56
344 345 3.350833 ACTGTTCCTTCCATCAGCAATC 58.649 45.455 0.00 0.00 0.00 2.67
345 346 3.245016 ACTGTTCCTTCCATCAGCAATCA 60.245 43.478 0.00 0.00 0.00 2.57
346 347 3.760151 CTGTTCCTTCCATCAGCAATCAA 59.240 43.478 0.00 0.00 0.00 2.57
347 348 3.507233 TGTTCCTTCCATCAGCAATCAAC 59.493 43.478 0.00 0.00 0.00 3.18
348 349 3.438216 TCCTTCCATCAGCAATCAACA 57.562 42.857 0.00 0.00 0.00 3.33
349 350 3.349927 TCCTTCCATCAGCAATCAACAG 58.650 45.455 0.00 0.00 0.00 3.16
350 351 3.087031 CCTTCCATCAGCAATCAACAGT 58.913 45.455 0.00 0.00 0.00 3.55
351 352 3.119602 CCTTCCATCAGCAATCAACAGTG 60.120 47.826 0.00 0.00 0.00 3.66
352 353 3.421919 TCCATCAGCAATCAACAGTGA 57.578 42.857 0.00 0.00 38.41 3.41
353 354 3.340928 TCCATCAGCAATCAACAGTGAG 58.659 45.455 0.00 0.00 37.14 3.51
354 355 2.159421 CCATCAGCAATCAACAGTGAGC 60.159 50.000 0.00 0.00 37.14 4.26
355 356 2.259266 TCAGCAATCAACAGTGAGCA 57.741 45.000 0.00 0.00 37.14 4.26
356 357 2.574450 TCAGCAATCAACAGTGAGCAA 58.426 42.857 0.00 0.00 37.14 3.91
357 358 2.291465 TCAGCAATCAACAGTGAGCAAC 59.709 45.455 0.00 0.00 37.14 4.17
358 359 1.610522 AGCAATCAACAGTGAGCAACC 59.389 47.619 0.00 0.00 37.14 3.77
359 360 1.337703 GCAATCAACAGTGAGCAACCA 59.662 47.619 0.00 0.00 37.14 3.67
360 361 2.606308 GCAATCAACAGTGAGCAACCAG 60.606 50.000 0.00 0.00 37.14 4.00
361 362 1.242076 ATCAACAGTGAGCAACCAGC 58.758 50.000 0.00 0.00 46.19 4.85
370 371 4.065110 GCAACCAGCTCCTCGTTT 57.935 55.556 0.00 0.00 41.15 3.60
371 372 1.869690 GCAACCAGCTCCTCGTTTC 59.130 57.895 0.00 0.00 41.15 2.78
372 373 0.603975 GCAACCAGCTCCTCGTTTCT 60.604 55.000 0.00 0.00 41.15 2.52
373 374 1.433534 CAACCAGCTCCTCGTTTCTC 58.566 55.000 0.00 0.00 0.00 2.87
374 375 0.038159 AACCAGCTCCTCGTTTCTCG 60.038 55.000 0.00 0.00 41.41 4.04
375 376 1.179814 ACCAGCTCCTCGTTTCTCGT 61.180 55.000 0.00 0.00 40.80 4.18
376 377 0.456995 CCAGCTCCTCGTTTCTCGTC 60.457 60.000 0.00 0.00 40.80 4.20
377 378 0.794981 CAGCTCCTCGTTTCTCGTCG 60.795 60.000 0.00 0.00 40.80 5.12
378 379 1.209640 GCTCCTCGTTTCTCGTCGT 59.790 57.895 0.00 0.00 40.80 4.34
379 380 0.386985 GCTCCTCGTTTCTCGTCGTT 60.387 55.000 0.00 0.00 40.80 3.85
380 381 1.929482 GCTCCTCGTTTCTCGTCGTTT 60.929 52.381 0.00 0.00 40.80 3.60
381 382 1.977412 CTCCTCGTTTCTCGTCGTTTC 59.023 52.381 0.00 0.00 40.80 2.78
382 383 1.334556 TCCTCGTTTCTCGTCGTTTCA 59.665 47.619 0.00 0.00 40.80 2.69
383 384 1.450905 CCTCGTTTCTCGTCGTTTCAC 59.549 52.381 0.00 0.00 40.80 3.18
384 385 1.450905 CTCGTTTCTCGTCGTTTCACC 59.549 52.381 0.00 0.00 40.80 4.02
385 386 0.158096 CGTTTCTCGTCGTTTCACCG 59.842 55.000 0.00 0.00 34.52 4.94
386 387 0.111398 GTTTCTCGTCGTTTCACCGC 60.111 55.000 0.00 0.00 0.00 5.68
387 388 0.528033 TTTCTCGTCGTTTCACCGCA 60.528 50.000 0.00 0.00 0.00 5.69
388 389 1.210545 TTCTCGTCGTTTCACCGCAC 61.211 55.000 0.00 0.00 0.00 5.34
389 390 1.660575 CTCGTCGTTTCACCGCACT 60.661 57.895 0.00 0.00 0.00 4.40
390 391 1.606350 CTCGTCGTTTCACCGCACTC 61.606 60.000 0.00 0.00 0.00 3.51
391 392 1.947146 CGTCGTTTCACCGCACTCA 60.947 57.895 0.00 0.00 0.00 3.41
392 393 1.282248 CGTCGTTTCACCGCACTCAT 61.282 55.000 0.00 0.00 0.00 2.90
393 394 0.438830 GTCGTTTCACCGCACTCATC 59.561 55.000 0.00 0.00 0.00 2.92
394 395 1.006825 TCGTTTCACCGCACTCATCG 61.007 55.000 0.00 0.00 0.00 3.84
395 396 1.006825 CGTTTCACCGCACTCATCGA 61.007 55.000 0.00 0.00 0.00 3.59
396 397 1.359848 GTTTCACCGCACTCATCGAT 58.640 50.000 0.00 0.00 0.00 3.59
397 398 1.324736 GTTTCACCGCACTCATCGATC 59.675 52.381 0.00 0.00 0.00 3.69
398 399 0.817654 TTCACCGCACTCATCGATCT 59.182 50.000 0.00 0.00 0.00 2.75
399 400 0.382158 TCACCGCACTCATCGATCTC 59.618 55.000 0.00 0.00 0.00 2.75
400 401 0.101219 CACCGCACTCATCGATCTCA 59.899 55.000 0.00 0.00 0.00 3.27
401 402 1.035923 ACCGCACTCATCGATCTCAT 58.964 50.000 0.00 0.00 0.00 2.90
402 403 1.269465 ACCGCACTCATCGATCTCATG 60.269 52.381 0.00 0.00 0.00 3.07
403 404 1.000938 CCGCACTCATCGATCTCATGA 60.001 52.381 0.00 0.00 0.00 3.07
404 405 2.352519 CCGCACTCATCGATCTCATGAT 60.353 50.000 0.00 0.00 35.26 2.45
405 406 2.916089 CGCACTCATCGATCTCATGATC 59.084 50.000 0.00 0.00 44.14 2.92
406 407 3.366171 CGCACTCATCGATCTCATGATCT 60.366 47.826 0.00 0.00 45.10 2.75
407 408 4.558178 GCACTCATCGATCTCATGATCTT 58.442 43.478 0.00 0.00 45.10 2.40
408 409 4.386350 GCACTCATCGATCTCATGATCTTG 59.614 45.833 0.00 2.18 45.10 3.02
409 410 5.770417 CACTCATCGATCTCATGATCTTGA 58.230 41.667 10.59 10.59 45.10 3.02
410 411 6.391537 CACTCATCGATCTCATGATCTTGAT 58.608 40.000 11.38 0.00 45.10 2.57
411 412 6.528774 CACTCATCGATCTCATGATCTTGATC 59.471 42.308 11.38 11.02 45.10 2.92
412 413 6.434965 ACTCATCGATCTCATGATCTTGATCT 59.565 38.462 16.36 2.87 45.10 2.75
413 414 6.622549 TCATCGATCTCATGATCTTGATCTG 58.377 40.000 16.36 11.01 45.10 2.90
414 415 6.433404 TCATCGATCTCATGATCTTGATCTGA 59.567 38.462 16.36 14.99 45.10 3.27
415 416 6.645790 TCGATCTCATGATCTTGATCTGAA 57.354 37.500 16.36 4.26 45.10 3.02
416 417 7.047460 TCGATCTCATGATCTTGATCTGAAA 57.953 36.000 16.36 1.82 45.10 2.69
417 418 7.668492 TCGATCTCATGATCTTGATCTGAAAT 58.332 34.615 16.36 5.71 45.10 2.17
418 419 7.813627 TCGATCTCATGATCTTGATCTGAAATC 59.186 37.037 16.36 11.58 45.10 2.17
419 420 7.599245 CGATCTCATGATCTTGATCTGAAATCA 59.401 37.037 16.36 0.00 45.10 2.57
420 421 9.274206 GATCTCATGATCTTGATCTGAAATCAA 57.726 33.333 11.38 0.97 44.19 2.57
421 422 9.628500 ATCTCATGATCTTGATCTGAAATCAAA 57.372 29.630 11.38 0.00 37.55 2.69
422 423 8.890718 TCTCATGATCTTGATCTGAAATCAAAC 58.109 33.333 11.38 0.00 37.55 2.93
423 424 8.803397 TCATGATCTTGATCTGAAATCAAACT 57.197 30.769 7.19 0.00 37.55 2.66
424 425 8.674607 TCATGATCTTGATCTGAAATCAAACTG 58.325 33.333 7.19 0.00 37.55 3.16
425 426 6.849502 TGATCTTGATCTGAAATCAAACTGC 58.150 36.000 11.31 0.00 37.55 4.40
426 427 6.431852 TGATCTTGATCTGAAATCAAACTGCA 59.568 34.615 11.31 0.00 37.55 4.41
427 428 6.005583 TCTTGATCTGAAATCAAACTGCAC 57.994 37.500 0.00 0.00 37.55 4.57
428 429 4.408993 TGATCTGAAATCAAACTGCACG 57.591 40.909 0.00 0.00 0.00 5.34
429 430 2.686558 TCTGAAATCAAACTGCACGC 57.313 45.000 0.00 0.00 0.00 5.34
430 431 1.266718 TCTGAAATCAAACTGCACGCC 59.733 47.619 0.00 0.00 0.00 5.68
431 432 0.313672 TGAAATCAAACTGCACGCCC 59.686 50.000 0.00 0.00 0.00 6.13
432 433 0.729140 GAAATCAAACTGCACGCCCG 60.729 55.000 0.00 0.00 0.00 6.13
433 434 1.452145 AAATCAAACTGCACGCCCGT 61.452 50.000 0.00 0.00 0.00 5.28
435 436 3.582120 CAAACTGCACGCCCGTGT 61.582 61.111 20.25 0.00 46.90 4.49
436 437 3.582120 AAACTGCACGCCCGTGTG 61.582 61.111 20.25 15.61 46.90 3.82
442 443 3.792047 CACGCCCGTGTGCAGATG 61.792 66.667 12.31 0.00 40.91 2.90
443 444 4.002506 ACGCCCGTGTGCAGATGA 62.003 61.111 4.29 0.00 0.00 2.92
444 445 3.190849 CGCCCGTGTGCAGATGAG 61.191 66.667 4.29 0.00 0.00 2.90
445 446 2.046892 GCCCGTGTGCAGATGAGT 60.047 61.111 4.29 0.00 0.00 3.41
446 447 1.672356 GCCCGTGTGCAGATGAGTT 60.672 57.895 4.29 0.00 0.00 3.01
447 448 1.237285 GCCCGTGTGCAGATGAGTTT 61.237 55.000 4.29 0.00 0.00 2.66
448 449 0.518636 CCCGTGTGCAGATGAGTTTG 59.481 55.000 4.29 0.00 0.00 2.93
449 450 0.110056 CCGTGTGCAGATGAGTTTGC 60.110 55.000 4.29 0.00 40.67 3.68
450 451 0.870393 CGTGTGCAGATGAGTTTGCT 59.130 50.000 0.00 0.00 40.87 3.91
451 452 1.399343 CGTGTGCAGATGAGTTTGCTG 60.399 52.381 0.00 0.00 40.87 4.41
454 455 2.260247 GCAGATGAGTTTGCTGCCA 58.740 52.632 0.00 0.00 46.94 4.92
455 456 0.599558 GCAGATGAGTTTGCTGCCAA 59.400 50.000 0.00 0.00 46.94 4.52
456 457 1.203994 GCAGATGAGTTTGCTGCCAAT 59.796 47.619 0.00 0.00 46.94 3.16
457 458 2.424601 GCAGATGAGTTTGCTGCCAATA 59.575 45.455 0.00 0.00 46.94 1.90
458 459 3.119388 GCAGATGAGTTTGCTGCCAATAA 60.119 43.478 0.00 0.00 46.94 1.40
459 460 4.441079 GCAGATGAGTTTGCTGCCAATAAT 60.441 41.667 0.00 0.00 46.94 1.28
460 461 5.657474 CAGATGAGTTTGCTGCCAATAATT 58.343 37.500 0.00 0.00 0.00 1.40
461 462 5.747197 CAGATGAGTTTGCTGCCAATAATTC 59.253 40.000 0.00 0.00 0.00 2.17
462 463 5.419788 AGATGAGTTTGCTGCCAATAATTCA 59.580 36.000 0.00 0.00 0.00 2.57
463 464 5.063180 TGAGTTTGCTGCCAATAATTCAG 57.937 39.130 0.00 0.00 0.00 3.02
464 465 4.766373 TGAGTTTGCTGCCAATAATTCAGA 59.234 37.500 0.00 0.00 0.00 3.27
465 466 5.064441 AGTTTGCTGCCAATAATTCAGAC 57.936 39.130 0.00 0.00 0.00 3.51
466 467 4.523943 AGTTTGCTGCCAATAATTCAGACA 59.476 37.500 0.00 0.00 0.00 3.41
467 468 5.186409 AGTTTGCTGCCAATAATTCAGACAT 59.814 36.000 0.00 0.00 0.00 3.06
468 469 4.642445 TGCTGCCAATAATTCAGACATG 57.358 40.909 0.00 0.00 0.00 3.21
469 470 4.018490 TGCTGCCAATAATTCAGACATGT 58.982 39.130 0.00 0.00 0.00 3.21
470 471 4.096833 TGCTGCCAATAATTCAGACATGTC 59.903 41.667 18.47 18.47 0.00 3.06
471 472 4.096833 GCTGCCAATAATTCAGACATGTCA 59.903 41.667 27.02 7.74 0.00 3.58
472 473 5.732528 GCTGCCAATAATTCAGACATGTCAG 60.733 44.000 27.02 19.61 0.00 3.51
473 474 4.096833 TGCCAATAATTCAGACATGTCAGC 59.903 41.667 27.02 13.06 0.00 4.26
474 475 4.498682 GCCAATAATTCAGACATGTCAGCC 60.499 45.833 27.02 0.99 0.00 4.85
475 476 4.885907 CCAATAATTCAGACATGTCAGCCT 59.114 41.667 27.02 10.11 0.00 4.58
476 477 5.008415 CCAATAATTCAGACATGTCAGCCTC 59.992 44.000 27.02 0.00 0.00 4.70
477 478 3.708403 AATTCAGACATGTCAGCCTCA 57.292 42.857 27.02 5.72 0.00 3.86
478 479 3.928005 ATTCAGACATGTCAGCCTCAT 57.072 42.857 27.02 7.71 0.00 2.90
479 480 3.708403 TTCAGACATGTCAGCCTCATT 57.292 42.857 27.02 1.19 0.00 2.57
480 481 4.824479 TTCAGACATGTCAGCCTCATTA 57.176 40.909 27.02 0.00 0.00 1.90
481 482 5.363562 TTCAGACATGTCAGCCTCATTAT 57.636 39.130 27.02 0.00 0.00 1.28
482 483 6.484364 TTCAGACATGTCAGCCTCATTATA 57.516 37.500 27.02 0.00 0.00 0.98
483 484 6.676990 TCAGACATGTCAGCCTCATTATAT 57.323 37.500 27.02 0.00 0.00 0.86
484 485 6.461640 TCAGACATGTCAGCCTCATTATATG 58.538 40.000 27.02 11.82 0.00 1.78
485 486 5.121925 CAGACATGTCAGCCTCATTATATGC 59.878 44.000 27.02 0.00 0.00 3.14
486 487 4.330250 ACATGTCAGCCTCATTATATGCC 58.670 43.478 0.00 0.00 0.00 4.40
487 488 3.423539 TGTCAGCCTCATTATATGCCC 57.576 47.619 0.00 0.00 0.00 5.36
488 489 2.040278 TGTCAGCCTCATTATATGCCCC 59.960 50.000 0.00 0.00 0.00 5.80
489 490 2.307098 GTCAGCCTCATTATATGCCCCT 59.693 50.000 0.00 0.00 0.00 4.79
490 491 2.988859 TCAGCCTCATTATATGCCCCTT 59.011 45.455 0.00 0.00 0.00 3.95
491 492 4.019321 GTCAGCCTCATTATATGCCCCTTA 60.019 45.833 0.00 0.00 0.00 2.69
492 493 4.019321 TCAGCCTCATTATATGCCCCTTAC 60.019 45.833 0.00 0.00 0.00 2.34
493 494 3.916349 AGCCTCATTATATGCCCCTTACA 59.084 43.478 0.00 0.00 0.00 2.41
494 495 4.010349 GCCTCATTATATGCCCCTTACAC 58.990 47.826 0.00 0.00 0.00 2.90
495 496 4.263506 GCCTCATTATATGCCCCTTACACT 60.264 45.833 0.00 0.00 0.00 3.55
496 497 5.248640 CCTCATTATATGCCCCTTACACTG 58.751 45.833 0.00 0.00 0.00 3.66
497 498 5.013079 CCTCATTATATGCCCCTTACACTGA 59.987 44.000 0.00 0.00 0.00 3.41
498 499 6.296662 CCTCATTATATGCCCCTTACACTGAT 60.297 42.308 0.00 0.00 0.00 2.90
499 500 6.711277 TCATTATATGCCCCTTACACTGATC 58.289 40.000 0.00 0.00 0.00 2.92
500 501 3.685139 ATATGCCCCTTACACTGATCG 57.315 47.619 0.00 0.00 0.00 3.69
501 502 0.469917 ATGCCCCTTACACTGATCGG 59.530 55.000 0.00 0.00 0.00 4.18
502 503 0.907704 TGCCCCTTACACTGATCGGT 60.908 55.000 0.00 0.00 0.00 4.69
503 504 0.179081 GCCCCTTACACTGATCGGTC 60.179 60.000 3.54 0.00 0.00 4.79
504 505 1.191535 CCCCTTACACTGATCGGTCA 58.808 55.000 3.54 0.00 0.00 4.02
505 506 1.134788 CCCCTTACACTGATCGGTCAC 60.135 57.143 3.54 0.00 0.00 3.67
506 507 1.548719 CCCTTACACTGATCGGTCACA 59.451 52.381 3.54 0.00 0.00 3.58
507 508 2.417379 CCCTTACACTGATCGGTCACAG 60.417 54.545 3.54 0.52 39.65 3.66
508 509 2.492088 CCTTACACTGATCGGTCACAGA 59.508 50.000 3.54 0.00 37.54 3.41
509 510 3.056821 CCTTACACTGATCGGTCACAGAA 60.057 47.826 3.54 0.00 37.54 3.02
510 511 4.556233 CTTACACTGATCGGTCACAGAAA 58.444 43.478 3.54 0.00 37.54 2.52
511 512 3.469008 ACACTGATCGGTCACAGAAAA 57.531 42.857 3.54 0.00 37.54 2.29
512 513 3.804036 ACACTGATCGGTCACAGAAAAA 58.196 40.909 3.54 0.00 37.54 1.94
624 625 0.037326 CTGCGTGCCTACTTCCTTGA 60.037 55.000 0.00 0.00 0.00 3.02
631 632 2.290323 TGCCTACTTCCTTGAGCTTTCC 60.290 50.000 0.00 0.00 0.00 3.13
742 873 1.096386 CCGACCACTCCTACTCCTCG 61.096 65.000 0.00 0.00 0.00 4.63
788 922 1.682684 GCCTCCCTCTCCTCGACAA 60.683 63.158 0.00 0.00 0.00 3.18
874 1078 1.830477 CCTCTCTTCTCCTCCACCAAG 59.170 57.143 0.00 0.00 0.00 3.61
952 1361 4.264253 TCACTAGCCACATCAAATTCCTG 58.736 43.478 0.00 0.00 0.00 3.86
969 1379 3.757270 TCCTGTTGAATCCCGCTAAAAA 58.243 40.909 0.00 0.00 0.00 1.94
1202 1630 3.350219 GGACTACTTCCTTGCCAATCA 57.650 47.619 0.00 0.00 41.95 2.57
1230 1659 3.517602 CCGTTACATGATCCTGAACGAA 58.482 45.455 23.44 6.40 44.19 3.85
1257 1686 0.550914 AAACCTCAAGCAGGGTGACA 59.449 50.000 0.00 0.00 44.26 3.58
1470 1900 2.035155 TCGCCGAGGAGAACCAGA 59.965 61.111 0.00 0.00 38.94 3.86
1550 1980 1.749638 CGACACCGGTAGCTCCTCT 60.750 63.158 6.87 0.00 0.00 3.69
1903 2413 2.294791 GCCTATCTGATGCAGTACTCGT 59.705 50.000 0.00 0.00 32.61 4.18
2162 2679 3.302347 CTGGCTCCACACGTCTCCC 62.302 68.421 0.00 0.00 0.00 4.30
2328 3089 2.224161 GGAAAGTCATCCTGATCTCCGG 60.224 54.545 0.00 0.00 36.50 5.14
2361 3122 0.391263 CTCTACCCCTTTCACGGCAC 60.391 60.000 0.00 0.00 0.00 5.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 3.917760 CGCACGGAGATCTCCCCC 61.918 72.222 31.77 19.91 46.96 5.40
9 10 4.593864 GCGCACGGAGATCTCCCC 62.594 72.222 31.77 20.23 46.96 4.81
10 11 3.838271 TGCGCACGGAGATCTCCC 61.838 66.667 31.77 19.52 46.96 4.30
11 12 2.583593 GTGCGCACGGAGATCTCC 60.584 66.667 29.15 29.15 46.18 3.71
12 13 2.583593 GGTGCGCACGGAGATCTC 60.584 66.667 32.35 14.75 0.00 2.75
13 14 4.148825 GGGTGCGCACGGAGATCT 62.149 66.667 32.35 0.00 0.00 2.75
21 22 3.660111 GAACACTGGGGTGCGCAC 61.660 66.667 32.15 32.15 46.57 5.34
23 24 4.980805 TCGAACACTGGGGTGCGC 62.981 66.667 0.00 0.00 46.57 6.09
24 25 2.280524 TTCGAACACTGGGGTGCG 60.281 61.111 0.00 0.00 46.57 5.34
25 26 2.258726 GGTTCGAACACTGGGGTGC 61.259 63.158 28.24 5.21 46.57 5.01
27 28 1.052124 TGAGGTTCGAACACTGGGGT 61.052 55.000 28.24 4.73 0.00 4.95
28 29 0.107831 TTGAGGTTCGAACACTGGGG 59.892 55.000 28.24 0.00 0.00 4.96
29 30 1.512926 CTTGAGGTTCGAACACTGGG 58.487 55.000 28.24 12.03 0.00 4.45
30 31 1.512926 CCTTGAGGTTCGAACACTGG 58.487 55.000 28.24 20.41 0.00 4.00
31 32 1.512926 CCCTTGAGGTTCGAACACTG 58.487 55.000 28.24 16.67 0.00 3.66
42 43 2.592993 TTCCGGCAGACCCTTGAGG 61.593 63.158 0.00 0.00 43.78 3.86
43 44 1.376037 GTTCCGGCAGACCCTTGAG 60.376 63.158 0.00 0.00 0.00 3.02
44 45 2.747686 GTTCCGGCAGACCCTTGA 59.252 61.111 0.00 0.00 0.00 3.02
45 46 2.359975 GGTTCCGGCAGACCCTTG 60.360 66.667 0.00 0.00 0.00 3.61
57 58 1.962822 GTGTCGGGTTTCGGGTTCC 60.963 63.158 0.00 0.00 39.77 3.62
58 59 2.312436 CGTGTCGGGTTTCGGGTTC 61.312 63.158 0.00 0.00 39.77 3.62
59 60 2.280321 CGTGTCGGGTTTCGGGTT 60.280 61.111 0.00 0.00 39.77 4.11
60 61 4.303993 CCGTGTCGGGTTTCGGGT 62.304 66.667 0.00 0.00 44.15 5.28
71 72 0.517316 GCTTTGACATGACCCGTGTC 59.483 55.000 0.00 11.26 46.84 3.67
72 73 0.179032 TGCTTTGACATGACCCGTGT 60.179 50.000 0.00 0.00 36.19 4.49
73 74 0.950836 TTGCTTTGACATGACCCGTG 59.049 50.000 0.00 0.00 0.00 4.94
74 75 0.951558 GTTGCTTTGACATGACCCGT 59.048 50.000 0.00 0.00 0.00 5.28
75 76 1.238439 AGTTGCTTTGACATGACCCG 58.762 50.000 0.00 0.00 0.00 5.28
76 77 2.863704 GCAAGTTGCTTTGACATGACCC 60.864 50.000 20.71 0.00 40.96 4.46
77 78 2.397549 GCAAGTTGCTTTGACATGACC 58.602 47.619 20.71 0.00 40.96 4.02
89 90 1.658409 GTTCGGCACAGCAAGTTGC 60.658 57.895 20.44 20.44 45.46 4.17
90 91 0.311790 ATGTTCGGCACAGCAAGTTG 59.688 50.000 0.00 0.00 39.40 3.16
91 92 1.032014 AATGTTCGGCACAGCAAGTT 58.968 45.000 0.00 0.00 39.40 2.66
92 93 0.311790 CAATGTTCGGCACAGCAAGT 59.688 50.000 0.00 0.00 39.40 3.16
93 94 0.387622 CCAATGTTCGGCACAGCAAG 60.388 55.000 0.00 0.00 39.40 4.01
94 95 1.659233 CCAATGTTCGGCACAGCAA 59.341 52.632 0.00 0.00 39.40 3.91
95 96 3.353600 CCAATGTTCGGCACAGCA 58.646 55.556 0.00 0.00 39.40 4.41
104 105 3.140814 GAGGGCCCGCCAATGTTC 61.141 66.667 18.44 1.01 37.98 3.18
113 114 4.214327 GAGAGAAGCGAGGGCCCG 62.214 72.222 18.44 6.58 41.24 6.13
114 115 3.077556 TGAGAGAAGCGAGGGCCC 61.078 66.667 16.46 16.46 41.24 5.80
115 116 2.498726 CTGAGAGAAGCGAGGGCC 59.501 66.667 0.00 0.00 41.24 5.80
116 117 2.202864 GCTGAGAGAAGCGAGGGC 60.203 66.667 0.00 0.00 40.37 5.19
122 123 0.742281 TGGAATGCGCTGAGAGAAGC 60.742 55.000 9.73 0.00 39.94 3.86
123 124 1.950828 ATGGAATGCGCTGAGAGAAG 58.049 50.000 9.73 0.00 0.00 2.85
124 125 3.118629 AGTTATGGAATGCGCTGAGAGAA 60.119 43.478 9.73 0.00 0.00 2.87
125 126 2.432146 AGTTATGGAATGCGCTGAGAGA 59.568 45.455 9.73 0.00 0.00 3.10
126 127 2.543012 CAGTTATGGAATGCGCTGAGAG 59.457 50.000 9.73 0.00 0.00 3.20
127 128 2.168313 TCAGTTATGGAATGCGCTGAGA 59.832 45.455 9.73 0.00 30.41 3.27
128 129 2.554142 TCAGTTATGGAATGCGCTGAG 58.446 47.619 9.73 0.00 30.41 3.35
129 130 2.689553 TCAGTTATGGAATGCGCTGA 57.310 45.000 9.73 0.00 31.03 4.26
130 131 2.938451 TCTTCAGTTATGGAATGCGCTG 59.062 45.455 9.73 0.00 0.00 5.18
131 132 3.201290 CTCTTCAGTTATGGAATGCGCT 58.799 45.455 9.73 0.00 0.00 5.92
132 133 2.289002 CCTCTTCAGTTATGGAATGCGC 59.711 50.000 0.00 0.00 0.00 6.09
133 134 3.797039 TCCTCTTCAGTTATGGAATGCG 58.203 45.455 0.00 0.00 0.00 4.73
134 135 3.563390 GCTCCTCTTCAGTTATGGAATGC 59.437 47.826 0.00 0.00 0.00 3.56
135 136 4.774124 TGCTCCTCTTCAGTTATGGAATG 58.226 43.478 0.00 0.00 0.00 2.67
136 137 5.441718 TTGCTCCTCTTCAGTTATGGAAT 57.558 39.130 0.00 0.00 0.00 3.01
137 138 4.908601 TTGCTCCTCTTCAGTTATGGAA 57.091 40.909 0.00 0.00 0.00 3.53
138 139 5.188434 CAATTGCTCCTCTTCAGTTATGGA 58.812 41.667 0.00 0.00 0.00 3.41
139 140 4.201990 GCAATTGCTCCTCTTCAGTTATGG 60.202 45.833 23.21 0.00 38.21 2.74
140 141 4.201990 GGCAATTGCTCCTCTTCAGTTATG 60.202 45.833 28.42 0.00 41.70 1.90
141 142 3.950395 GGCAATTGCTCCTCTTCAGTTAT 59.050 43.478 28.42 0.00 41.70 1.89
142 143 3.347216 GGCAATTGCTCCTCTTCAGTTA 58.653 45.455 28.42 0.00 41.70 2.24
143 144 2.165998 GGCAATTGCTCCTCTTCAGTT 58.834 47.619 28.42 0.00 41.70 3.16
144 145 1.831580 GGCAATTGCTCCTCTTCAGT 58.168 50.000 28.42 0.00 41.70 3.41
145 146 0.731417 CGGCAATTGCTCCTCTTCAG 59.269 55.000 28.42 6.68 41.70 3.02
146 147 0.677731 CCGGCAATTGCTCCTCTTCA 60.678 55.000 28.42 0.00 41.70 3.02
147 148 1.997928 GCCGGCAATTGCTCCTCTTC 61.998 60.000 28.42 10.16 41.70 2.87
148 149 2.048603 GCCGGCAATTGCTCCTCTT 61.049 57.895 28.42 0.00 41.70 2.85
149 150 2.439156 GCCGGCAATTGCTCCTCT 60.439 61.111 28.42 0.00 41.70 3.69
150 151 1.669999 ATTGCCGGCAATTGCTCCTC 61.670 55.000 41.98 15.74 43.32 3.71
151 152 1.669999 GATTGCCGGCAATTGCTCCT 61.670 55.000 45.38 29.17 45.50 3.69
152 153 1.227060 GATTGCCGGCAATTGCTCC 60.227 57.895 45.38 31.91 45.50 4.70
153 154 1.587088 CGATTGCCGGCAATTGCTC 60.587 57.895 45.38 34.58 45.50 4.26
154 155 1.996786 CTCGATTGCCGGCAATTGCT 61.997 55.000 44.80 32.00 45.50 3.91
155 156 1.587088 CTCGATTGCCGGCAATTGC 60.587 57.895 44.80 34.96 45.50 3.56
156 157 0.171007 AACTCGATTGCCGGCAATTG 59.829 50.000 44.39 44.39 45.50 2.32
157 158 0.171007 CAACTCGATTGCCGGCAATT 59.829 50.000 45.38 31.78 45.50 2.32
159 160 2.331893 CCAACTCGATTGCCGGCAA 61.332 57.895 41.54 41.54 40.47 4.52
160 161 2.745884 CCAACTCGATTGCCGGCA 60.746 61.111 29.03 29.03 36.93 5.69
161 162 2.435938 TCCAACTCGATTGCCGGC 60.436 61.111 22.73 22.73 36.93 6.13
162 163 0.953471 TTGTCCAACTCGATTGCCGG 60.953 55.000 0.00 0.00 36.93 6.13
163 164 0.165944 GTTGTCCAACTCGATTGCCG 59.834 55.000 2.95 0.00 38.25 5.69
173 174 2.554032 CCTGGATCAACAGTTGTCCAAC 59.446 50.000 25.32 1.90 39.01 3.77
174 175 2.488891 CCCTGGATCAACAGTTGTCCAA 60.489 50.000 25.32 15.77 39.01 3.53
175 176 1.073763 CCCTGGATCAACAGTTGTCCA 59.926 52.381 24.47 24.47 38.01 4.02
176 177 1.351017 TCCCTGGATCAACAGTTGTCC 59.649 52.381 20.02 20.02 36.75 4.02
177 178 2.704572 CTCCCTGGATCAACAGTTGTC 58.295 52.381 13.14 9.65 36.75 3.18
178 179 1.271597 GCTCCCTGGATCAACAGTTGT 60.272 52.381 13.14 0.83 36.75 3.32
179 180 1.457346 GCTCCCTGGATCAACAGTTG 58.543 55.000 6.99 6.99 36.75 3.16
180 181 0.036010 CGCTCCCTGGATCAACAGTT 60.036 55.000 0.00 0.00 36.75 3.16
181 182 1.599047 CGCTCCCTGGATCAACAGT 59.401 57.895 0.00 0.00 36.75 3.55
182 183 1.153289 CCGCTCCCTGGATCAACAG 60.153 63.158 0.00 0.00 38.21 3.16
183 184 1.612146 TCCGCTCCCTGGATCAACA 60.612 57.895 0.00 0.00 0.00 3.33
184 185 1.144936 CTCCGCTCCCTGGATCAAC 59.855 63.158 0.00 0.00 34.32 3.18
185 186 1.306141 ACTCCGCTCCCTGGATCAA 60.306 57.895 0.00 0.00 34.32 2.57
186 187 1.758514 GACTCCGCTCCCTGGATCA 60.759 63.158 0.00 0.00 34.32 2.92
187 188 2.851071 CGACTCCGCTCCCTGGATC 61.851 68.421 0.00 0.00 34.32 3.36
188 189 2.648613 ATCGACTCCGCTCCCTGGAT 62.649 60.000 0.00 0.00 34.32 3.41
189 190 3.360423 ATCGACTCCGCTCCCTGGA 62.360 63.158 0.00 0.00 35.37 3.86
190 191 2.835431 ATCGACTCCGCTCCCTGG 60.835 66.667 0.00 0.00 35.37 4.45
191 192 1.949847 AACATCGACTCCGCTCCCTG 61.950 60.000 0.00 0.00 35.37 4.45
192 193 1.668101 GAACATCGACTCCGCTCCCT 61.668 60.000 0.00 0.00 35.37 4.20
193 194 1.227002 GAACATCGACTCCGCTCCC 60.227 63.158 0.00 0.00 35.37 4.30
194 195 0.526524 CAGAACATCGACTCCGCTCC 60.527 60.000 0.00 0.00 35.37 4.70
195 196 0.171455 ACAGAACATCGACTCCGCTC 59.829 55.000 0.00 0.00 35.37 5.03
196 197 0.603569 AACAGAACATCGACTCCGCT 59.396 50.000 0.00 0.00 35.37 5.52
197 198 0.992802 GAACAGAACATCGACTCCGC 59.007 55.000 0.00 0.00 35.37 5.54
198 199 2.254459 CTGAACAGAACATCGACTCCG 58.746 52.381 0.00 0.00 37.07 4.63
199 200 2.231478 TCCTGAACAGAACATCGACTCC 59.769 50.000 3.19 0.00 0.00 3.85
200 201 3.246619 GTCCTGAACAGAACATCGACTC 58.753 50.000 3.19 0.00 0.00 3.36
201 202 2.628178 TGTCCTGAACAGAACATCGACT 59.372 45.455 3.19 0.00 32.81 4.18
202 203 3.026630 TGTCCTGAACAGAACATCGAC 57.973 47.619 3.19 2.30 32.81 4.20
203 204 3.961480 ATGTCCTGAACAGAACATCGA 57.039 42.857 1.02 0.00 42.37 3.59
204 205 3.996363 TCAATGTCCTGAACAGAACATCG 59.004 43.478 7.10 0.00 42.37 3.84
205 206 5.065731 GGATCAATGTCCTGAACAGAACATC 59.934 44.000 7.10 0.00 42.37 3.06
206 207 4.946157 GGATCAATGTCCTGAACAGAACAT 59.054 41.667 1.02 1.02 42.37 2.71
207 208 4.202451 TGGATCAATGTCCTGAACAGAACA 60.202 41.667 3.19 0.00 42.37 3.18
208 209 4.326826 TGGATCAATGTCCTGAACAGAAC 58.673 43.478 3.19 0.00 42.37 3.01
209 210 4.042062 ACTGGATCAATGTCCTGAACAGAA 59.958 41.667 12.76 0.00 42.37 3.02
210 211 3.584406 ACTGGATCAATGTCCTGAACAGA 59.416 43.478 12.76 0.00 42.37 3.41
211 212 3.947868 ACTGGATCAATGTCCTGAACAG 58.052 45.455 12.76 0.00 42.37 3.16
212 213 4.074259 CAACTGGATCAATGTCCTGAACA 58.926 43.478 12.76 0.00 43.51 3.18
213 214 3.119708 GCAACTGGATCAATGTCCTGAAC 60.120 47.826 12.76 2.57 38.96 3.18
214 215 3.084039 GCAACTGGATCAATGTCCTGAA 58.916 45.455 12.76 0.00 38.96 3.02
215 216 2.040145 TGCAACTGGATCAATGTCCTGA 59.960 45.455 12.76 0.00 38.96 3.86
216 217 2.439409 TGCAACTGGATCAATGTCCTG 58.561 47.619 0.00 7.02 41.48 3.86
217 218 2.885135 TGCAACTGGATCAATGTCCT 57.115 45.000 0.00 0.00 39.12 3.85
218 219 4.460948 AATTGCAACTGGATCAATGTCC 57.539 40.909 0.00 0.00 38.81 4.02
219 220 5.039333 GCTAATTGCAACTGGATCAATGTC 58.961 41.667 0.00 0.00 42.31 3.06
220 221 5.002464 GCTAATTGCAACTGGATCAATGT 57.998 39.130 0.00 0.00 42.31 2.71
234 235 3.125316 AGTTGCTTCGTACTGCTAATTGC 59.875 43.478 0.00 0.00 43.25 3.56
235 236 4.928661 AGTTGCTTCGTACTGCTAATTG 57.071 40.909 0.00 0.00 0.00 2.32
236 237 7.429636 TTTTAGTTGCTTCGTACTGCTAATT 57.570 32.000 0.00 0.00 0.00 1.40
237 238 7.549488 AGATTTTAGTTGCTTCGTACTGCTAAT 59.451 33.333 0.00 0.00 0.00 1.73
238 239 6.872020 AGATTTTAGTTGCTTCGTACTGCTAA 59.128 34.615 0.00 0.00 0.00 3.09
239 240 6.310467 CAGATTTTAGTTGCTTCGTACTGCTA 59.690 38.462 0.00 0.00 0.00 3.49
240 241 5.120830 CAGATTTTAGTTGCTTCGTACTGCT 59.879 40.000 0.00 0.00 0.00 4.24
241 242 5.316770 CAGATTTTAGTTGCTTCGTACTGC 58.683 41.667 0.00 0.00 0.00 4.40
242 243 5.107104 TGCAGATTTTAGTTGCTTCGTACTG 60.107 40.000 0.00 0.00 38.60 2.74
243 244 4.994852 TGCAGATTTTAGTTGCTTCGTACT 59.005 37.500 0.00 0.00 38.60 2.73
244 245 5.277601 TGCAGATTTTAGTTGCTTCGTAC 57.722 39.130 0.00 0.00 38.60 3.67
245 246 7.494298 TGATATGCAGATTTTAGTTGCTTCGTA 59.506 33.333 0.00 0.00 38.60 3.43
246 247 6.316140 TGATATGCAGATTTTAGTTGCTTCGT 59.684 34.615 0.00 0.00 38.60 3.85
247 248 6.718388 TGATATGCAGATTTTAGTTGCTTCG 58.282 36.000 0.00 0.00 38.60 3.79
248 249 9.178427 GATTGATATGCAGATTTTAGTTGCTTC 57.822 33.333 0.00 0.00 38.60 3.86
249 250 8.689061 TGATTGATATGCAGATTTTAGTTGCTT 58.311 29.630 0.00 0.00 38.60 3.91
250 251 8.229253 TGATTGATATGCAGATTTTAGTTGCT 57.771 30.769 0.00 0.00 38.60 3.91
251 252 8.347771 TCTGATTGATATGCAGATTTTAGTTGC 58.652 33.333 0.00 0.00 34.02 4.17
254 255 8.512956 GCATCTGATTGATATGCAGATTTTAGT 58.487 33.333 0.00 0.00 44.55 2.24
255 256 8.731605 AGCATCTGATTGATATGCAGATTTTAG 58.268 33.333 8.99 0.00 44.55 1.85
256 257 8.631480 AGCATCTGATTGATATGCAGATTTTA 57.369 30.769 8.99 0.00 44.55 1.52
257 258 7.230712 TGAGCATCTGATTGATATGCAGATTTT 59.769 33.333 8.99 0.00 44.55 1.82
258 259 6.715264 TGAGCATCTGATTGATATGCAGATTT 59.285 34.615 8.99 0.00 44.55 2.17
259 260 6.149640 GTGAGCATCTGATTGATATGCAGATT 59.850 38.462 8.99 0.00 44.55 2.40
261 262 4.995487 GTGAGCATCTGATTGATATGCAGA 59.005 41.667 8.99 0.00 46.66 4.26
262 263 4.154375 GGTGAGCATCTGATTGATATGCAG 59.846 45.833 8.99 0.00 46.66 4.41
263 264 4.070009 GGTGAGCATCTGATTGATATGCA 58.930 43.478 8.99 0.00 46.66 3.96
264 265 4.070009 TGGTGAGCATCTGATTGATATGC 58.930 43.478 0.00 0.00 45.02 3.14
265 266 5.548406 TCTGGTGAGCATCTGATTGATATG 58.452 41.667 0.00 0.00 34.92 1.78
266 267 5.820404 TCTGGTGAGCATCTGATTGATAT 57.180 39.130 0.00 0.00 34.92 1.63
267 268 5.820404 ATCTGGTGAGCATCTGATTGATA 57.180 39.130 0.00 0.00 34.92 2.15
268 269 4.708576 ATCTGGTGAGCATCTGATTGAT 57.291 40.909 0.00 0.00 34.92 2.57
269 270 5.608449 CTTATCTGGTGAGCATCTGATTGA 58.392 41.667 8.16 0.00 33.16 2.57
270 271 4.213694 GCTTATCTGGTGAGCATCTGATTG 59.786 45.833 8.16 4.50 39.15 2.67
271 272 4.141551 TGCTTATCTGGTGAGCATCTGATT 60.142 41.667 2.93 0.00 43.67 2.57
272 273 3.390311 TGCTTATCTGGTGAGCATCTGAT 59.610 43.478 2.93 7.99 43.67 2.90
273 274 2.767960 TGCTTATCTGGTGAGCATCTGA 59.232 45.455 2.93 0.00 43.67 3.27
274 275 3.189618 TGCTTATCTGGTGAGCATCTG 57.810 47.619 2.93 0.00 43.67 2.90
279 280 2.216898 GGACATGCTTATCTGGTGAGC 58.783 52.381 0.00 0.00 39.74 4.26
280 281 2.159043 ACGGACATGCTTATCTGGTGAG 60.159 50.000 0.00 0.00 0.00 3.51
281 282 1.831106 ACGGACATGCTTATCTGGTGA 59.169 47.619 0.00 0.00 0.00 4.02
282 283 1.935873 CACGGACATGCTTATCTGGTG 59.064 52.381 0.00 0.00 0.00 4.17
283 284 1.134401 CCACGGACATGCTTATCTGGT 60.134 52.381 0.00 0.00 0.00 4.00
284 285 1.138859 TCCACGGACATGCTTATCTGG 59.861 52.381 0.00 0.00 0.00 3.86
285 286 2.602257 TCCACGGACATGCTTATCTG 57.398 50.000 0.00 0.00 0.00 2.90
286 287 2.420129 GGTTCCACGGACATGCTTATCT 60.420 50.000 0.00 0.00 0.00 1.98
287 288 1.940613 GGTTCCACGGACATGCTTATC 59.059 52.381 0.00 0.00 0.00 1.75
288 289 1.559682 AGGTTCCACGGACATGCTTAT 59.440 47.619 0.00 0.00 0.00 1.73
289 290 0.981183 AGGTTCCACGGACATGCTTA 59.019 50.000 0.00 0.00 0.00 3.09
290 291 0.321653 GAGGTTCCACGGACATGCTT 60.322 55.000 0.00 0.00 0.00 3.91
291 292 1.296715 GAGGTTCCACGGACATGCT 59.703 57.895 0.00 0.00 0.00 3.79
292 293 1.745489 GGAGGTTCCACGGACATGC 60.745 63.158 0.00 0.00 36.28 4.06
293 294 0.391661 CTGGAGGTTCCACGGACATG 60.392 60.000 0.00 0.00 42.67 3.21
294 295 1.983224 CTGGAGGTTCCACGGACAT 59.017 57.895 0.00 0.00 42.67 3.06
295 296 2.879233 GCTGGAGGTTCCACGGACA 61.879 63.158 0.00 0.00 42.67 4.02
296 297 2.047179 GCTGGAGGTTCCACGGAC 60.047 66.667 0.00 0.00 42.67 4.79
297 298 3.691342 CGCTGGAGGTTCCACGGA 61.691 66.667 10.29 0.00 42.67 4.69
300 301 3.842925 TTGGCGCTGGAGGTTCCAC 62.843 63.158 7.64 0.00 42.67 4.02
301 302 3.551496 CTTGGCGCTGGAGGTTCCA 62.551 63.158 7.64 0.00 45.98 3.53
302 303 2.747855 CTTGGCGCTGGAGGTTCC 60.748 66.667 7.64 0.00 36.96 3.62
303 304 2.032681 ACTTGGCGCTGGAGGTTC 59.967 61.111 7.64 0.00 0.00 3.62
304 305 2.032681 GACTTGGCGCTGGAGGTT 59.967 61.111 7.64 0.00 0.00 3.50
305 306 2.818169 TTGACTTGGCGCTGGAGGT 61.818 57.895 7.64 0.00 0.00 3.85
306 307 2.032528 TTGACTTGGCGCTGGAGG 59.967 61.111 7.64 0.00 0.00 4.30
307 308 1.302033 AGTTGACTTGGCGCTGGAG 60.302 57.895 7.64 5.47 0.00 3.86
308 309 1.597854 CAGTTGACTTGGCGCTGGA 60.598 57.895 7.64 0.00 0.00 3.86
309 310 1.447317 AACAGTTGACTTGGCGCTGG 61.447 55.000 7.64 0.00 0.00 4.85
310 311 0.040958 GAACAGTTGACTTGGCGCTG 60.041 55.000 7.64 0.06 0.00 5.18
311 312 1.166531 GGAACAGTTGACTTGGCGCT 61.167 55.000 7.64 0.00 0.00 5.92
312 313 1.166531 AGGAACAGTTGACTTGGCGC 61.167 55.000 0.00 0.00 0.00 6.53
313 314 1.264288 GAAGGAACAGTTGACTTGGCG 59.736 52.381 4.89 0.00 0.00 5.69
314 315 1.609072 GGAAGGAACAGTTGACTTGGC 59.391 52.381 4.89 0.00 0.00 4.52
315 316 2.930950 TGGAAGGAACAGTTGACTTGG 58.069 47.619 4.89 0.00 0.00 3.61
316 317 4.136796 TGATGGAAGGAACAGTTGACTTG 58.863 43.478 4.89 0.00 0.00 3.16
317 318 4.392940 CTGATGGAAGGAACAGTTGACTT 58.607 43.478 0.00 0.00 0.00 3.01
318 319 3.808618 GCTGATGGAAGGAACAGTTGACT 60.809 47.826 0.00 0.00 33.57 3.41
319 320 2.485814 GCTGATGGAAGGAACAGTTGAC 59.514 50.000 0.00 0.00 33.57 3.18
320 321 2.106338 TGCTGATGGAAGGAACAGTTGA 59.894 45.455 0.00 0.00 33.57 3.18
321 322 2.507484 TGCTGATGGAAGGAACAGTTG 58.493 47.619 0.00 0.00 33.57 3.16
322 323 2.957402 TGCTGATGGAAGGAACAGTT 57.043 45.000 0.00 0.00 33.57 3.16
323 324 2.957402 TTGCTGATGGAAGGAACAGT 57.043 45.000 0.00 0.00 33.57 3.55
324 325 3.349927 TGATTGCTGATGGAAGGAACAG 58.650 45.455 0.00 0.00 29.64 3.16
325 326 3.438216 TGATTGCTGATGGAAGGAACA 57.562 42.857 0.00 0.00 29.64 3.18
326 327 3.507233 TGTTGATTGCTGATGGAAGGAAC 59.493 43.478 0.00 0.00 29.64 3.62
327 328 3.760151 CTGTTGATTGCTGATGGAAGGAA 59.240 43.478 0.00 0.00 31.63 3.36
328 329 3.245016 ACTGTTGATTGCTGATGGAAGGA 60.245 43.478 0.00 0.00 0.00 3.36
329 330 3.087031 ACTGTTGATTGCTGATGGAAGG 58.913 45.455 0.00 0.00 0.00 3.46
330 331 3.754850 TCACTGTTGATTGCTGATGGAAG 59.245 43.478 0.00 0.00 0.00 3.46
331 332 3.753815 TCACTGTTGATTGCTGATGGAA 58.246 40.909 0.00 0.00 0.00 3.53
332 333 3.340928 CTCACTGTTGATTGCTGATGGA 58.659 45.455 0.00 0.00 0.00 3.41
333 334 2.159421 GCTCACTGTTGATTGCTGATGG 60.159 50.000 0.00 0.00 0.00 3.51
334 335 2.486592 TGCTCACTGTTGATTGCTGATG 59.513 45.455 0.00 0.00 0.00 3.07
335 336 2.786777 TGCTCACTGTTGATTGCTGAT 58.213 42.857 0.00 0.00 0.00 2.90
336 337 2.259266 TGCTCACTGTTGATTGCTGA 57.741 45.000 0.00 0.00 0.00 4.26
337 338 2.606308 GGTTGCTCACTGTTGATTGCTG 60.606 50.000 0.00 0.00 0.00 4.41
338 339 1.610522 GGTTGCTCACTGTTGATTGCT 59.389 47.619 0.00 0.00 0.00 3.91
339 340 1.337703 TGGTTGCTCACTGTTGATTGC 59.662 47.619 0.00 0.00 0.00 3.56
340 341 2.606308 GCTGGTTGCTCACTGTTGATTG 60.606 50.000 0.00 0.00 38.95 2.67
341 342 1.610522 GCTGGTTGCTCACTGTTGATT 59.389 47.619 0.00 0.00 38.95 2.57
342 343 1.242076 GCTGGTTGCTCACTGTTGAT 58.758 50.000 0.00 0.00 38.95 2.57
343 344 2.706636 GCTGGTTGCTCACTGTTGA 58.293 52.632 0.00 0.00 38.95 3.18
353 354 0.603975 AGAAACGAGGAGCTGGTTGC 60.604 55.000 0.00 0.00 43.29 4.17
354 355 1.433534 GAGAAACGAGGAGCTGGTTG 58.566 55.000 0.00 0.00 33.03 3.77
355 356 0.038159 CGAGAAACGAGGAGCTGGTT 60.038 55.000 0.00 0.00 45.77 3.67
356 357 1.179814 ACGAGAAACGAGGAGCTGGT 61.180 55.000 0.00 0.00 45.77 4.00
357 358 0.456995 GACGAGAAACGAGGAGCTGG 60.457 60.000 0.00 0.00 45.77 4.85
358 359 0.794981 CGACGAGAAACGAGGAGCTG 60.795 60.000 0.00 0.00 45.77 4.24
359 360 1.235948 ACGACGAGAAACGAGGAGCT 61.236 55.000 0.00 0.00 45.77 4.09
360 361 0.386985 AACGACGAGAAACGAGGAGC 60.387 55.000 0.00 0.00 45.77 4.70
361 362 1.977412 GAAACGACGAGAAACGAGGAG 59.023 52.381 0.00 0.00 45.77 3.69
362 363 1.334556 TGAAACGACGAGAAACGAGGA 59.665 47.619 0.00 0.00 45.77 3.71
363 364 1.450905 GTGAAACGACGAGAAACGAGG 59.549 52.381 0.00 0.00 45.77 4.63
364 365 1.450905 GGTGAAACGACGAGAAACGAG 59.549 52.381 0.00 0.00 40.94 4.18
365 366 1.480205 GGTGAAACGACGAGAAACGA 58.520 50.000 0.00 0.00 40.94 3.85
366 367 0.158096 CGGTGAAACGACGAGAAACG 59.842 55.000 0.00 0.00 43.23 3.60
367 368 0.111398 GCGGTGAAACGACGAGAAAC 60.111 55.000 0.00 0.00 38.12 2.78
368 369 0.528033 TGCGGTGAAACGACGAGAAA 60.528 50.000 0.00 0.00 38.12 2.52
369 370 1.066093 TGCGGTGAAACGACGAGAA 59.934 52.632 0.00 0.00 38.12 2.87
370 371 1.659335 GTGCGGTGAAACGACGAGA 60.659 57.895 0.00 0.00 38.12 4.04
371 372 1.606350 GAGTGCGGTGAAACGACGAG 61.606 60.000 0.00 0.00 38.12 4.18
372 373 1.659335 GAGTGCGGTGAAACGACGA 60.659 57.895 0.00 0.00 38.12 4.20
373 374 1.282248 ATGAGTGCGGTGAAACGACG 61.282 55.000 0.00 0.00 38.12 5.12
374 375 0.438830 GATGAGTGCGGTGAAACGAC 59.561 55.000 0.00 0.00 38.12 4.34
375 376 1.006825 CGATGAGTGCGGTGAAACGA 61.007 55.000 0.00 0.00 38.12 3.85
376 377 1.006825 TCGATGAGTGCGGTGAAACG 61.007 55.000 0.00 0.00 38.12 3.60
377 378 1.324736 GATCGATGAGTGCGGTGAAAC 59.675 52.381 0.54 0.00 0.00 2.78
378 379 1.204704 AGATCGATGAGTGCGGTGAAA 59.795 47.619 0.54 0.00 0.00 2.69
379 380 0.817654 AGATCGATGAGTGCGGTGAA 59.182 50.000 0.54 0.00 0.00 3.18
380 381 0.382158 GAGATCGATGAGTGCGGTGA 59.618 55.000 0.54 0.00 0.00 4.02
381 382 0.101219 TGAGATCGATGAGTGCGGTG 59.899 55.000 0.54 0.00 0.00 4.94
382 383 1.035923 ATGAGATCGATGAGTGCGGT 58.964 50.000 0.54 0.00 0.00 5.68
383 384 1.000938 TCATGAGATCGATGAGTGCGG 60.001 52.381 0.54 0.00 0.00 5.69
384 385 2.412421 TCATGAGATCGATGAGTGCG 57.588 50.000 0.54 0.00 0.00 5.34
395 396 9.628500 TTTGATTTCAGATCAAGATCATGAGAT 57.372 29.630 12.21 11.81 38.98 2.75
396 397 8.890718 GTTTGATTTCAGATCAAGATCATGAGA 58.109 33.333 12.21 8.37 38.98 3.27
397 398 8.894731 AGTTTGATTTCAGATCAAGATCATGAG 58.105 33.333 12.21 0.00 38.98 2.90
398 399 8.674607 CAGTTTGATTTCAGATCAAGATCATGA 58.325 33.333 12.21 2.64 38.98 3.07
399 400 7.432545 GCAGTTTGATTTCAGATCAAGATCATG 59.567 37.037 12.21 7.69 38.98 3.07
400 401 7.122204 TGCAGTTTGATTTCAGATCAAGATCAT 59.878 33.333 12.21 0.00 38.98 2.45
401 402 6.431852 TGCAGTTTGATTTCAGATCAAGATCA 59.568 34.615 12.21 0.00 38.98 2.92
402 403 6.746364 GTGCAGTTTGATTTCAGATCAAGATC 59.254 38.462 1.81 1.81 38.98 2.75
403 404 6.618811 GTGCAGTTTGATTTCAGATCAAGAT 58.381 36.000 0.00 0.00 38.98 2.40
404 405 5.334337 CGTGCAGTTTGATTTCAGATCAAGA 60.334 40.000 0.00 0.00 38.98 3.02
405 406 4.849926 CGTGCAGTTTGATTTCAGATCAAG 59.150 41.667 0.00 0.00 38.98 3.02
406 407 4.786507 CGTGCAGTTTGATTTCAGATCAA 58.213 39.130 0.00 0.00 36.37 2.57
407 408 3.365264 GCGTGCAGTTTGATTTCAGATCA 60.365 43.478 0.00 0.00 0.00 2.92
408 409 3.166657 GCGTGCAGTTTGATTTCAGATC 58.833 45.455 0.00 0.00 0.00 2.75
409 410 2.095059 GGCGTGCAGTTTGATTTCAGAT 60.095 45.455 0.00 0.00 0.00 2.90
410 411 1.266718 GGCGTGCAGTTTGATTTCAGA 59.733 47.619 0.00 0.00 0.00 3.27
411 412 1.666888 GGGCGTGCAGTTTGATTTCAG 60.667 52.381 0.00 0.00 0.00 3.02
412 413 0.313672 GGGCGTGCAGTTTGATTTCA 59.686 50.000 0.00 0.00 0.00 2.69
413 414 0.729140 CGGGCGTGCAGTTTGATTTC 60.729 55.000 0.00 0.00 0.00 2.17
414 415 1.285641 CGGGCGTGCAGTTTGATTT 59.714 52.632 0.00 0.00 0.00 2.17
415 416 1.896660 ACGGGCGTGCAGTTTGATT 60.897 52.632 0.00 0.00 0.00 2.57
416 417 2.281484 ACGGGCGTGCAGTTTGAT 60.281 55.556 0.00 0.00 0.00 2.57
417 418 3.276091 CACGGGCGTGCAGTTTGA 61.276 61.111 0.00 0.00 39.39 2.69
426 427 3.939837 CTCATCTGCACACGGGCGT 62.940 63.158 0.00 0.00 36.28 5.68
427 428 3.190849 CTCATCTGCACACGGGCG 61.191 66.667 0.00 0.00 36.28 6.13
428 429 1.237285 AAACTCATCTGCACACGGGC 61.237 55.000 0.00 0.00 0.00 6.13
429 430 0.518636 CAAACTCATCTGCACACGGG 59.481 55.000 0.00 0.00 0.00 5.28
430 431 0.110056 GCAAACTCATCTGCACACGG 60.110 55.000 0.00 0.00 38.48 4.94
431 432 0.870393 AGCAAACTCATCTGCACACG 59.130 50.000 0.00 0.00 41.17 4.49
432 433 2.327081 CAGCAAACTCATCTGCACAC 57.673 50.000 0.00 0.00 41.17 3.82
437 438 4.707030 TTATTGGCAGCAAACTCATCTG 57.293 40.909 0.00 0.00 0.00 2.90
438 439 5.419788 TGAATTATTGGCAGCAAACTCATCT 59.580 36.000 0.00 0.00 0.00 2.90
439 440 5.653507 TGAATTATTGGCAGCAAACTCATC 58.346 37.500 0.00 0.00 0.00 2.92
440 441 5.419788 TCTGAATTATTGGCAGCAAACTCAT 59.580 36.000 0.00 0.00 0.00 2.90
441 442 4.766373 TCTGAATTATTGGCAGCAAACTCA 59.234 37.500 0.00 0.00 0.00 3.41
442 443 5.098211 GTCTGAATTATTGGCAGCAAACTC 58.902 41.667 0.00 0.00 0.00 3.01
443 444 4.523943 TGTCTGAATTATTGGCAGCAAACT 59.476 37.500 0.00 0.00 0.00 2.66
444 445 4.808558 TGTCTGAATTATTGGCAGCAAAC 58.191 39.130 0.00 0.00 0.00 2.93
445 446 5.047164 ACATGTCTGAATTATTGGCAGCAAA 60.047 36.000 0.00 0.00 0.00 3.68
446 447 4.463539 ACATGTCTGAATTATTGGCAGCAA 59.536 37.500 0.00 0.00 0.00 3.91
447 448 4.018490 ACATGTCTGAATTATTGGCAGCA 58.982 39.130 0.00 0.00 0.00 4.41
448 449 4.096833 TGACATGTCTGAATTATTGGCAGC 59.903 41.667 25.55 0.00 0.00 5.25
449 450 5.732528 GCTGACATGTCTGAATTATTGGCAG 60.733 44.000 30.31 15.25 0.00 4.85
450 451 4.096833 GCTGACATGTCTGAATTATTGGCA 59.903 41.667 30.31 5.97 0.00 4.92
451 452 4.498682 GGCTGACATGTCTGAATTATTGGC 60.499 45.833 30.31 15.77 0.00 4.52
452 453 4.885907 AGGCTGACATGTCTGAATTATTGG 59.114 41.667 30.31 8.88 0.00 3.16
453 454 5.587443 TGAGGCTGACATGTCTGAATTATTG 59.413 40.000 30.31 10.15 0.00 1.90
454 455 5.748402 TGAGGCTGACATGTCTGAATTATT 58.252 37.500 30.31 11.97 0.00 1.40
455 456 5.363562 TGAGGCTGACATGTCTGAATTAT 57.636 39.130 30.31 13.75 0.00 1.28
456 457 4.824479 TGAGGCTGACATGTCTGAATTA 57.176 40.909 30.31 14.76 0.00 1.40
457 458 3.708403 TGAGGCTGACATGTCTGAATT 57.292 42.857 30.31 16.97 0.00 2.17
458 459 3.928005 ATGAGGCTGACATGTCTGAAT 57.072 42.857 30.31 19.46 0.00 2.57
459 460 3.708403 AATGAGGCTGACATGTCTGAA 57.292 42.857 30.31 15.52 0.00 3.02
460 461 6.461640 CATATAATGAGGCTGACATGTCTGA 58.538 40.000 30.31 13.97 0.00 3.27
461 462 5.121925 GCATATAATGAGGCTGACATGTCTG 59.878 44.000 25.55 24.77 0.00 3.51
462 463 5.243981 GCATATAATGAGGCTGACATGTCT 58.756 41.667 25.55 6.21 0.00 3.41
463 464 4.394300 GGCATATAATGAGGCTGACATGTC 59.606 45.833 19.27 19.27 0.00 3.06
464 465 4.330250 GGCATATAATGAGGCTGACATGT 58.670 43.478 0.00 0.00 0.00 3.21
465 466 3.693085 GGGCATATAATGAGGCTGACATG 59.307 47.826 0.00 0.00 0.00 3.21
466 467 3.308688 GGGGCATATAATGAGGCTGACAT 60.309 47.826 0.00 0.00 0.00 3.06
467 468 2.040278 GGGGCATATAATGAGGCTGACA 59.960 50.000 0.00 0.00 0.00 3.58
468 469 2.307098 AGGGGCATATAATGAGGCTGAC 59.693 50.000 0.00 0.00 0.00 3.51
469 470 2.636005 AGGGGCATATAATGAGGCTGA 58.364 47.619 0.00 0.00 0.00 4.26
470 471 3.446442 AAGGGGCATATAATGAGGCTG 57.554 47.619 0.00 0.00 0.00 4.85
471 472 3.916349 TGTAAGGGGCATATAATGAGGCT 59.084 43.478 0.00 0.00 0.00 4.58
472 473 4.010349 GTGTAAGGGGCATATAATGAGGC 58.990 47.826 0.00 0.00 0.00 4.70
473 474 5.013079 TCAGTGTAAGGGGCATATAATGAGG 59.987 44.000 0.00 0.00 0.00 3.86
474 475 6.114187 TCAGTGTAAGGGGCATATAATGAG 57.886 41.667 0.00 0.00 0.00 2.90
475 476 6.574269 CGATCAGTGTAAGGGGCATATAATGA 60.574 42.308 0.00 0.00 0.00 2.57
476 477 5.582269 CGATCAGTGTAAGGGGCATATAATG 59.418 44.000 0.00 0.00 0.00 1.90
477 478 5.338381 CCGATCAGTGTAAGGGGCATATAAT 60.338 44.000 0.00 0.00 0.00 1.28
478 479 4.020573 CCGATCAGTGTAAGGGGCATATAA 60.021 45.833 0.00 0.00 0.00 0.98
479 480 3.513912 CCGATCAGTGTAAGGGGCATATA 59.486 47.826 0.00 0.00 0.00 0.86
480 481 2.303022 CCGATCAGTGTAAGGGGCATAT 59.697 50.000 0.00 0.00 0.00 1.78
481 482 1.691976 CCGATCAGTGTAAGGGGCATA 59.308 52.381 0.00 0.00 0.00 3.14
482 483 0.469917 CCGATCAGTGTAAGGGGCAT 59.530 55.000 0.00 0.00 0.00 4.40
483 484 0.907704 ACCGATCAGTGTAAGGGGCA 60.908 55.000 0.00 0.00 0.00 5.36
484 485 0.179081 GACCGATCAGTGTAAGGGGC 60.179 60.000 0.00 0.00 0.00 5.80
485 486 1.134788 GTGACCGATCAGTGTAAGGGG 60.135 57.143 0.00 0.00 34.75 4.79
486 487 1.548719 TGTGACCGATCAGTGTAAGGG 59.451 52.381 0.00 0.00 34.75 3.95
487 488 2.492088 TCTGTGACCGATCAGTGTAAGG 59.508 50.000 0.00 0.00 34.75 2.69
488 489 3.850122 TCTGTGACCGATCAGTGTAAG 57.150 47.619 0.00 0.00 34.75 2.34
489 490 4.594123 TTTCTGTGACCGATCAGTGTAA 57.406 40.909 0.00 0.00 34.75 2.41
490 491 4.594123 TTTTCTGTGACCGATCAGTGTA 57.406 40.909 0.00 0.00 34.75 2.90
491 492 3.469008 TTTTCTGTGACCGATCAGTGT 57.531 42.857 0.00 0.00 34.75 3.55
509 510 3.306294 GCTAACAAGCTGATGCCCTTTTT 60.306 43.478 0.00 0.00 40.80 1.94
510 511 2.232208 GCTAACAAGCTGATGCCCTTTT 59.768 45.455 0.00 0.00 40.80 2.27
511 512 1.821136 GCTAACAAGCTGATGCCCTTT 59.179 47.619 0.00 0.00 40.80 3.11
512 513 1.272092 TGCTAACAAGCTGATGCCCTT 60.272 47.619 0.00 0.00 40.80 3.95
513 514 0.329261 TGCTAACAAGCTGATGCCCT 59.671 50.000 0.00 0.00 40.80 5.19
514 515 1.066605 CATGCTAACAAGCTGATGCCC 59.933 52.381 0.00 0.00 40.80 5.36
515 516 1.747355 ACATGCTAACAAGCTGATGCC 59.253 47.619 0.00 0.00 40.80 4.40
516 517 3.374988 TGTACATGCTAACAAGCTGATGC 59.625 43.478 0.00 0.00 40.05 3.91
517 518 4.392754 TGTGTACATGCTAACAAGCTGATG 59.607 41.667 0.00 0.00 35.49 3.07
518 519 4.578871 TGTGTACATGCTAACAAGCTGAT 58.421 39.130 0.00 0.00 35.49 2.90
519 520 4.001618 TGTGTACATGCTAACAAGCTGA 57.998 40.909 0.00 0.00 35.49 4.26
520 521 4.952262 ATGTGTACATGCTAACAAGCTG 57.048 40.909 0.00 0.00 34.83 4.24
521 522 6.092670 CAGTAATGTGTACATGCTAACAAGCT 59.907 38.462 0.00 0.00 36.56 3.74
624 625 6.886459 ACAACAGTCATTACATATGGAAAGCT 59.114 34.615 4.01 0.60 0.00 3.74
653 656 6.196918 TGATTGCCCTTGATCTCAGATTAT 57.803 37.500 0.00 0.00 0.00 1.28
902 1106 3.083997 GAGGATGGGGTGGCGAGT 61.084 66.667 0.00 0.00 0.00 4.18
1202 1630 1.476833 GGATCATGTAACGGGCCACAT 60.477 52.381 4.39 2.17 35.79 3.21
1230 1659 2.550208 CCTGCTTGAGGTTTCGGTACTT 60.550 50.000 0.00 0.00 37.02 2.24
1349 1779 1.371558 GAGGCCGTGGAGAAACTGT 59.628 57.895 0.00 0.00 0.00 3.55
1541 1971 4.499116 GGGGGCCCAGAGGAGCTA 62.499 72.222 26.86 0.00 35.81 3.32
1560 2004 2.672996 CCGGTGTTGGGGAAGCTG 60.673 66.667 0.00 0.00 0.00 4.24
1903 2413 3.776781 CGGGGGTGCATGGTACGA 61.777 66.667 0.00 0.00 0.00 3.43
1934 2444 1.402896 GGCGAGATGATCCCAGGACA 61.403 60.000 0.00 0.00 0.00 4.02
2338 3099 1.263356 CGTGAAAGGGGTAGAGGTCA 58.737 55.000 0.00 0.00 0.00 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.