Multiple sequence alignment - TraesCS6A01G064000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G064000 chr6A 100.000 4542 0 0 1 4542 34177188 34181729 0.000000e+00 8388
1 TraesCS6A01G064000 chr6A 79.110 1101 186 25 1008 2089 33224456 33223381 0.000000e+00 719
2 TraesCS6A01G064000 chr6A 75.775 1354 244 60 993 2304 33255152 33256463 1.400000e-169 606
3 TraesCS6A01G064000 chr6A 79.916 717 127 13 1655 2363 46295836 46295129 1.130000e-140 510
4 TraesCS6A01G064000 chr6A 77.099 524 84 21 1008 1516 40543289 40542787 2.080000e-68 270
5 TraesCS6A01G064000 chr6A 73.021 619 138 19 1703 2299 34029873 34030484 1.670000e-44 191
6 TraesCS6A01G064000 chr6A 96.429 84 2 1 677 760 34175825 34175743 2.200000e-28 137
7 TraesCS6A01G064000 chr6B 96.416 3795 95 19 765 4542 62405133 62401363 0.000000e+00 6216
8 TraesCS6A01G064000 chr6B 78.940 1358 237 30 1024 2363 79555806 79554480 0.000000e+00 878
9 TraesCS6A01G064000 chr6B 78.645 1358 240 31 1024 2363 79438313 79436988 0.000000e+00 856
10 TraesCS6A01G064000 chr6B 75.841 1308 246 50 1024 2304 60593846 60595110 6.500000e-168 601
11 TraesCS6A01G064000 chr6B 75.669 1159 206 46 1021 2159 60583799 60584901 4.050000e-140 508
12 TraesCS6A01G064000 chr6B 74.167 1351 242 63 993 2294 82165930 82167222 3.200000e-126 462
13 TraesCS6A01G064000 chr6B 75.991 908 136 36 3218 4085 79849190 79850055 1.180000e-105 394
14 TraesCS6A01G064000 chr6B 77.035 688 140 13 1686 2359 79847698 79848381 3.320000e-101 379
15 TraesCS6A01G064000 chr6B 81.366 483 65 19 3268 3734 82008265 82008738 2.000000e-98 370
16 TraesCS6A01G064000 chr6B 79.954 439 61 14 994 1427 76153370 76152954 9.550000e-77 298
17 TraesCS6A01G064000 chr6B 78.960 423 68 10 1009 1428 45551874 45552278 7.490000e-68 268
18 TraesCS6A01G064000 chr6B 74.704 423 91 15 1908 2321 77392346 77392761 1.680000e-39 174
19 TraesCS6A01G064000 chr6B 89.796 98 9 1 2361 2457 530560463 530560366 1.720000e-24 124
20 TraesCS6A01G064000 chrUn 96.022 3796 90 23 765 4542 101885831 101889583 0.000000e+00 6117
21 TraesCS6A01G064000 chrUn 79.363 1318 231 27 1024 2327 112304486 112303196 0.000000e+00 889
22 TraesCS6A01G064000 chrUn 74.720 1337 248 59 993 2296 26705231 26703952 8.710000e-142 514
23 TraesCS6A01G064000 chrUn 74.353 1353 240 62 991 2294 26970977 26969683 1.140000e-130 477
24 TraesCS6A01G064000 chrUn 81.281 609 94 11 1761 2363 112892052 112892646 4.110000e-130 475
25 TraesCS6A01G064000 chrUn 74.387 1101 174 55 3059 4080 27370175 27371246 5.550000e-99 372
26 TraesCS6A01G064000 chrUn 80.368 489 67 22 3268 3734 27076576 27077057 1.210000e-90 344
27 TraesCS6A01G064000 chrUn 76.170 684 137 17 1682 2347 27448394 27449069 2.020000e-88 337
28 TraesCS6A01G064000 chrUn 73.223 1083 213 49 1083 2140 27082708 27083738 5.670000e-84 322
29 TraesCS6A01G064000 chrUn 78.446 399 72 13 1040 1430 76751763 76751371 9.760000e-62 248
30 TraesCS6A01G064000 chrUn 75.884 481 93 17 1830 2294 27073888 27074361 1.640000e-54 224
31 TraesCS6A01G064000 chr2A 83.348 1153 170 19 1021 2166 762930826 762929689 0.000000e+00 1046
32 TraesCS6A01G064000 chr2A 81.738 564 67 21 2483 3032 762929435 762928894 5.390000e-119 438
33 TraesCS6A01G064000 chr1B 89.744 468 37 6 202 669 654101747 654102203 5.060000e-164 588
34 TraesCS6A01G064000 chr1B 94.737 95 5 0 655 749 654102223 654102317 1.020000e-31 148
35 TraesCS6A01G064000 chr1A 87.571 354 33 5 202 555 34734228 34734570 2.550000e-107 399
36 TraesCS6A01G064000 chr1A 91.753 97 7 1 2362 2457 64714429 64714333 2.850000e-27 134
37 TraesCS6A01G064000 chr1A 92.045 88 6 1 677 764 34734013 34733927 6.170000e-24 122
38 TraesCS6A01G064000 chr6D 79.888 537 82 20 993 1515 29094619 29094095 2.000000e-98 370
39 TraesCS6A01G064000 chr6D 77.526 574 99 22 1024 1588 29152838 29152286 7.330000e-83 318
40 TraesCS6A01G064000 chr6D 78.082 438 77 18 991 1420 27329098 27328672 4.510000e-65 259
41 TraesCS6A01G064000 chr6D 74.398 664 131 28 1687 2322 28657662 28657010 9.760000e-62 248
42 TraesCS6A01G064000 chr6D 78.068 383 66 15 1043 1419 27209618 27209248 4.570000e-55 226
43 TraesCS6A01G064000 chr7B 78.287 327 48 17 183 491 20573285 20572964 6.000000e-44 189
44 TraesCS6A01G064000 chr7B 90.722 97 8 1 2362 2457 245070347 245070443 1.330000e-25 128
45 TraesCS6A01G064000 chr7B 90.526 95 8 1 2364 2457 296356906 296356812 1.720000e-24 124
46 TraesCS6A01G064000 chr7A 81.532 222 34 4 281 495 79231220 79230999 4.670000e-40 176
47 TraesCS6A01G064000 chr3D 91.753 97 7 1 2362 2457 336537981 336537885 2.850000e-27 134
48 TraesCS6A01G064000 chr3D 89.524 105 7 4 2357 2459 336537881 336537983 3.690000e-26 130
49 TraesCS6A01G064000 chr3A 88.785 107 10 2 2358 2463 130843935 130843830 3.690000e-26 130
50 TraesCS6A01G064000 chr2B 81.250 160 29 1 275 434 793960834 793960992 1.330000e-25 128
51 TraesCS6A01G064000 chr5B 79.429 175 29 7 2122 2294 697029572 697029403 2.870000e-22 117


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G064000 chr6A 34177188 34181729 4541 False 8388.0 8388 100.0000 1 4542 1 chr6A.!!$F3 4541
1 TraesCS6A01G064000 chr6A 33223381 33224456 1075 True 719.0 719 79.1100 1008 2089 1 chr6A.!!$R1 1081
2 TraesCS6A01G064000 chr6A 33255152 33256463 1311 False 606.0 606 75.7750 993 2304 1 chr6A.!!$F1 1311
3 TraesCS6A01G064000 chr6A 46295129 46295836 707 True 510.0 510 79.9160 1655 2363 1 chr6A.!!$R4 708
4 TraesCS6A01G064000 chr6A 40542787 40543289 502 True 270.0 270 77.0990 1008 1516 1 chr6A.!!$R3 508
5 TraesCS6A01G064000 chr6B 62401363 62405133 3770 True 6216.0 6216 96.4160 765 4542 1 chr6B.!!$R1 3777
6 TraesCS6A01G064000 chr6B 79554480 79555806 1326 True 878.0 878 78.9400 1024 2363 1 chr6B.!!$R4 1339
7 TraesCS6A01G064000 chr6B 79436988 79438313 1325 True 856.0 856 78.6450 1024 2363 1 chr6B.!!$R3 1339
8 TraesCS6A01G064000 chr6B 60593846 60595110 1264 False 601.0 601 75.8410 1024 2304 1 chr6B.!!$F3 1280
9 TraesCS6A01G064000 chr6B 60583799 60584901 1102 False 508.0 508 75.6690 1021 2159 1 chr6B.!!$F2 1138
10 TraesCS6A01G064000 chr6B 82165930 82167222 1292 False 462.0 462 74.1670 993 2294 1 chr6B.!!$F6 1301
11 TraesCS6A01G064000 chr6B 79847698 79850055 2357 False 386.5 394 76.5130 1686 4085 2 chr6B.!!$F7 2399
12 TraesCS6A01G064000 chrUn 101885831 101889583 3752 False 6117.0 6117 96.0220 765 4542 1 chrUn.!!$F4 3777
13 TraesCS6A01G064000 chrUn 112303196 112304486 1290 True 889.0 889 79.3630 1024 2327 1 chrUn.!!$R4 1303
14 TraesCS6A01G064000 chrUn 26703952 26705231 1279 True 514.0 514 74.7200 993 2296 1 chrUn.!!$R1 1303
15 TraesCS6A01G064000 chrUn 26969683 26970977 1294 True 477.0 477 74.3530 991 2294 1 chrUn.!!$R2 1303
16 TraesCS6A01G064000 chrUn 112892052 112892646 594 False 475.0 475 81.2810 1761 2363 1 chrUn.!!$F5 602
17 TraesCS6A01G064000 chrUn 27370175 27371246 1071 False 372.0 372 74.3870 3059 4080 1 chrUn.!!$F2 1021
18 TraesCS6A01G064000 chrUn 27448394 27449069 675 False 337.0 337 76.1700 1682 2347 1 chrUn.!!$F3 665
19 TraesCS6A01G064000 chrUn 27082708 27083738 1030 False 322.0 322 73.2230 1083 2140 1 chrUn.!!$F1 1057
20 TraesCS6A01G064000 chrUn 27073888 27077057 3169 False 284.0 344 78.1260 1830 3734 2 chrUn.!!$F6 1904
21 TraesCS6A01G064000 chr2A 762928894 762930826 1932 True 742.0 1046 82.5430 1021 3032 2 chr2A.!!$R1 2011
22 TraesCS6A01G064000 chr1B 654101747 654102317 570 False 368.0 588 92.2405 202 749 2 chr1B.!!$F1 547
23 TraesCS6A01G064000 chr6D 29094095 29094619 524 True 370.0 370 79.8880 993 1515 1 chr6D.!!$R4 522
24 TraesCS6A01G064000 chr6D 29152286 29152838 552 True 318.0 318 77.5260 1024 1588 1 chr6D.!!$R5 564
25 TraesCS6A01G064000 chr6D 28657010 28657662 652 True 248.0 248 74.3980 1687 2322 1 chr6D.!!$R3 635

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
588 589 0.029035 CGACGACGGGGAGTAATCAG 59.971 60.000 0.00 0.00 35.72 2.90 F
718 719 0.036388 GAACGGTGATGCCAGAAGGA 60.036 55.000 0.00 0.00 36.89 3.36 F
1478 1667 0.040058 ATCAATGGGGCAGTGCTTCA 59.960 50.000 16.11 13.66 29.02 3.02 F
1708 1915 3.069586 CGCTGTGATGGTTAGGGATTCTA 59.930 47.826 0.00 0.00 0.00 2.10 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1478 1667 1.913951 TTGGATGTCTCCGGCAGCAT 61.914 55.000 0.0 0.0 45.37 3.79 R
1708 1915 4.591321 TCCCAGCAAGAATCCAGTAAAT 57.409 40.909 0.0 0.0 0.00 1.40 R
2796 4455 4.812091 TCAAGCTACTTTTTCACGCAGTTA 59.188 37.500 0.0 0.0 41.61 2.24 R
3597 5393 6.227298 ACAGTTCAGATACCTCAACATAGG 57.773 41.667 0.0 0.0 42.82 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.572209 TACAAGTTTGGTACAGGGCC 57.428 50.000 0.00 0.00 42.39 5.80
21 22 0.553819 ACAAGTTTGGTACAGGGCCA 59.446 50.000 6.18 0.00 42.39 5.36
22 23 1.063567 ACAAGTTTGGTACAGGGCCAA 60.064 47.619 6.18 0.00 43.51 4.52
23 24 1.339929 CAAGTTTGGTACAGGGCCAAC 59.660 52.381 6.18 0.00 44.70 3.77
24 25 0.178973 AGTTTGGTACAGGGCCAACC 60.179 55.000 6.18 11.15 44.70 3.77
33 34 2.272471 GGGCCAACCTCTAGCACC 59.728 66.667 4.39 0.00 35.85 5.01
34 35 2.301738 GGGCCAACCTCTAGCACCT 61.302 63.158 4.39 0.00 35.85 4.00
35 36 1.685820 GGCCAACCTCTAGCACCTT 59.314 57.895 0.00 0.00 0.00 3.50
36 37 0.678048 GGCCAACCTCTAGCACCTTG 60.678 60.000 0.00 0.00 0.00 3.61
37 38 0.678048 GCCAACCTCTAGCACCTTGG 60.678 60.000 0.00 0.00 35.44 3.61
38 39 0.693049 CCAACCTCTAGCACCTTGGT 59.307 55.000 0.00 0.00 0.00 3.67
39 40 1.906574 CCAACCTCTAGCACCTTGGTA 59.093 52.381 0.00 0.00 0.00 3.25
40 41 2.354805 CCAACCTCTAGCACCTTGGTAC 60.355 54.545 0.00 0.00 0.00 3.34
41 42 2.301870 CAACCTCTAGCACCTTGGTACA 59.698 50.000 0.00 0.00 0.00 2.90
42 43 1.900486 ACCTCTAGCACCTTGGTACAC 59.100 52.381 0.00 0.00 39.29 2.90
43 44 1.899814 CCTCTAGCACCTTGGTACACA 59.100 52.381 0.00 0.00 39.29 3.72
44 45 2.093973 CCTCTAGCACCTTGGTACACAG 60.094 54.545 0.00 0.00 39.29 3.66
45 46 1.275291 TCTAGCACCTTGGTACACAGC 59.725 52.381 0.00 0.00 39.29 4.40
46 47 1.276421 CTAGCACCTTGGTACACAGCT 59.724 52.381 6.76 6.76 39.29 4.24
47 48 0.250467 AGCACCTTGGTACACAGCTG 60.250 55.000 13.48 13.48 39.29 4.24
48 49 0.250295 GCACCTTGGTACACAGCTGA 60.250 55.000 23.35 0.00 39.29 4.26
49 50 1.813862 GCACCTTGGTACACAGCTGAA 60.814 52.381 23.35 1.38 39.29 3.02
50 51 2.571212 CACCTTGGTACACAGCTGAAA 58.429 47.619 23.35 1.55 39.29 2.69
51 52 2.948979 CACCTTGGTACACAGCTGAAAA 59.051 45.455 23.35 1.14 39.29 2.29
52 53 3.380004 CACCTTGGTACACAGCTGAAAAA 59.620 43.478 23.35 4.92 39.29 1.94
53 54 3.380320 ACCTTGGTACACAGCTGAAAAAC 59.620 43.478 23.35 12.21 39.29 2.43
54 55 3.380004 CCTTGGTACACAGCTGAAAAACA 59.620 43.478 23.35 10.62 39.29 2.83
55 56 4.037923 CCTTGGTACACAGCTGAAAAACAT 59.962 41.667 23.35 0.00 39.29 2.71
56 57 4.829064 TGGTACACAGCTGAAAAACATC 57.171 40.909 23.35 2.65 0.00 3.06
57 58 4.203226 TGGTACACAGCTGAAAAACATCA 58.797 39.130 23.35 5.27 0.00 3.07
58 59 5.221028 TTGGTACACAGCTGAAAAACATCAG 60.221 40.000 23.35 0.02 44.20 2.90
68 69 6.757897 CTGAAAAACATCAGCTATAACCCA 57.242 37.500 0.00 0.00 40.31 4.51
69 70 7.156876 CTGAAAAACATCAGCTATAACCCAA 57.843 36.000 0.00 0.00 40.31 4.12
70 71 7.531857 TGAAAAACATCAGCTATAACCCAAA 57.468 32.000 0.00 0.00 0.00 3.28
71 72 8.133024 TGAAAAACATCAGCTATAACCCAAAT 57.867 30.769 0.00 0.00 0.00 2.32
72 73 8.250332 TGAAAAACATCAGCTATAACCCAAATC 58.750 33.333 0.00 0.00 0.00 2.17
73 74 7.716799 AAAACATCAGCTATAACCCAAATCA 57.283 32.000 0.00 0.00 0.00 2.57
74 75 7.902920 AAACATCAGCTATAACCCAAATCAT 57.097 32.000 0.00 0.00 0.00 2.45
75 76 7.516198 AACATCAGCTATAACCCAAATCATC 57.484 36.000 0.00 0.00 0.00 2.92
76 77 6.604171 ACATCAGCTATAACCCAAATCATCA 58.396 36.000 0.00 0.00 0.00 3.07
77 78 7.062322 ACATCAGCTATAACCCAAATCATCAA 58.938 34.615 0.00 0.00 0.00 2.57
78 79 7.727186 ACATCAGCTATAACCCAAATCATCAAT 59.273 33.333 0.00 0.00 0.00 2.57
79 80 7.514784 TCAGCTATAACCCAAATCATCAATG 57.485 36.000 0.00 0.00 0.00 2.82
80 81 7.289310 TCAGCTATAACCCAAATCATCAATGA 58.711 34.615 0.00 0.00 41.70 2.57
81 82 7.779326 TCAGCTATAACCCAAATCATCAATGAA 59.221 33.333 0.00 0.00 40.69 2.57
82 83 8.582437 CAGCTATAACCCAAATCATCAATGAAT 58.418 33.333 0.00 0.00 40.69 2.57
83 84 9.812347 AGCTATAACCCAAATCATCAATGAATA 57.188 29.630 0.00 0.00 40.69 1.75
89 90 9.715121 AACCCAAATCATCAATGAATATTATGC 57.285 29.630 0.00 0.00 40.69 3.14
90 91 9.096823 ACCCAAATCATCAATGAATATTATGCT 57.903 29.630 0.00 0.00 40.69 3.79
91 92 9.582431 CCCAAATCATCAATGAATATTATGCTC 57.418 33.333 0.00 0.00 40.69 4.26
104 105 9.791820 TGAATATTATGCTCACAAATTGACAAG 57.208 29.630 0.00 0.00 0.00 3.16
105 106 8.638685 AATATTATGCTCACAAATTGACAAGC 57.361 30.769 0.00 6.07 0.00 4.01
106 107 5.450592 TTATGCTCACAAATTGACAAGCA 57.549 34.783 18.08 18.08 37.34 3.91
107 108 4.530710 ATGCTCACAAATTGACAAGCAT 57.469 36.364 20.03 20.03 38.30 3.79
108 109 3.904571 TGCTCACAAATTGACAAGCATC 58.095 40.909 14.11 0.00 30.15 3.91
109 110 3.318557 TGCTCACAAATTGACAAGCATCA 59.681 39.130 14.11 0.00 30.15 3.07
110 111 4.202131 TGCTCACAAATTGACAAGCATCAA 60.202 37.500 14.11 1.17 42.62 2.57
112 113 5.163992 GCTCACAAATTGACAAGCATCAATG 60.164 40.000 10.53 5.07 46.35 2.82
129 130 6.792326 CATCAATGCTCTGCTCTTAAATTGA 58.208 36.000 0.00 0.00 37.08 2.57
130 131 6.432607 TCAATGCTCTGCTCTTAAATTGAG 57.567 37.500 0.00 0.00 31.07 3.02
131 132 6.175471 TCAATGCTCTGCTCTTAAATTGAGA 58.825 36.000 0.00 0.00 33.68 3.27
132 133 6.656270 TCAATGCTCTGCTCTTAAATTGAGAA 59.344 34.615 0.00 0.00 33.68 2.87
133 134 5.869753 TGCTCTGCTCTTAAATTGAGAAC 57.130 39.130 0.00 0.00 33.68 3.01
134 135 5.308014 TGCTCTGCTCTTAAATTGAGAACA 58.692 37.500 0.00 0.00 33.68 3.18
135 136 5.942236 TGCTCTGCTCTTAAATTGAGAACAT 59.058 36.000 0.00 0.00 33.68 2.71
136 137 6.432162 TGCTCTGCTCTTAAATTGAGAACATT 59.568 34.615 0.00 0.00 33.68 2.71
137 138 7.607607 TGCTCTGCTCTTAAATTGAGAACATTA 59.392 33.333 0.00 0.00 33.68 1.90
138 139 8.454106 GCTCTGCTCTTAAATTGAGAACATTAA 58.546 33.333 0.00 0.00 33.68 1.40
173 174 8.001881 TCAGTACAATCTGAGTTCTAGATTCC 57.998 38.462 0.00 0.00 41.60 3.01
174 175 7.836685 TCAGTACAATCTGAGTTCTAGATTCCT 59.163 37.037 0.00 0.00 41.60 3.36
175 176 9.126151 CAGTACAATCTGAGTTCTAGATTCCTA 57.874 37.037 0.00 0.00 41.60 2.94
176 177 9.702253 AGTACAATCTGAGTTCTAGATTCCTAA 57.298 33.333 0.00 0.00 41.60 2.69
177 178 9.738832 GTACAATCTGAGTTCTAGATTCCTAAC 57.261 37.037 0.00 0.00 41.60 2.34
178 179 8.367660 ACAATCTGAGTTCTAGATTCCTAACA 57.632 34.615 0.00 0.00 41.60 2.41
179 180 8.816894 ACAATCTGAGTTCTAGATTCCTAACAA 58.183 33.333 0.00 0.00 41.60 2.83
180 181 9.658799 CAATCTGAGTTCTAGATTCCTAACAAA 57.341 33.333 0.00 0.00 41.60 2.83
229 230 7.992754 AAAATTCATTTCAGACTCTAGCTGT 57.007 32.000 0.00 0.00 34.98 4.40
257 258 1.032657 TGTCTGCCTCCTCTAGCGTC 61.033 60.000 0.00 0.00 0.00 5.19
266 267 0.100325 CCTCTAGCGTCAGACTGCAG 59.900 60.000 13.48 13.48 0.00 4.41
338 339 3.422303 GCTCATCAACGCGGCACA 61.422 61.111 12.47 0.00 0.00 4.57
339 340 2.753966 GCTCATCAACGCGGCACAT 61.754 57.895 12.47 0.00 0.00 3.21
346 347 2.686816 AACGCGGCACATACTTGGC 61.687 57.895 12.47 0.00 38.68 4.52
350 351 2.438434 GGCACATACTTGGCGCCT 60.438 61.111 29.70 10.43 40.54 5.52
351 352 2.472909 GGCACATACTTGGCGCCTC 61.473 63.158 29.70 1.40 40.54 4.70
352 353 2.472909 GCACATACTTGGCGCCTCC 61.473 63.158 29.70 0.50 0.00 4.30
353 354 1.819632 CACATACTTGGCGCCTCCC 60.820 63.158 29.70 0.05 0.00 4.30
354 355 2.588877 CATACTTGGCGCCTCCCG 60.589 66.667 29.70 15.10 40.75 5.14
413 414 4.517815 GTGGCGGCCATGGCATTG 62.518 66.667 36.56 25.63 46.76 2.82
425 426 3.096791 GCATTGCCAGCGACTCTC 58.903 61.111 0.00 0.00 0.00 3.20
426 427 2.467826 GCATTGCCAGCGACTCTCC 61.468 63.158 0.00 0.00 0.00 3.71
427 428 1.817099 CATTGCCAGCGACTCTCCC 60.817 63.158 0.00 0.00 0.00 4.30
428 429 1.992277 ATTGCCAGCGACTCTCCCT 60.992 57.895 0.00 0.00 0.00 4.20
429 430 1.965754 ATTGCCAGCGACTCTCCCTC 61.966 60.000 0.00 0.00 0.00 4.30
430 431 2.757917 GCCAGCGACTCTCCCTCT 60.758 66.667 0.00 0.00 0.00 3.69
431 432 2.355193 GCCAGCGACTCTCCCTCTT 61.355 63.158 0.00 0.00 0.00 2.85
432 433 1.515020 CCAGCGACTCTCCCTCTTG 59.485 63.158 0.00 0.00 0.00 3.02
433 434 1.153667 CAGCGACTCTCCCTCTTGC 60.154 63.158 0.00 0.00 0.00 4.01
434 435 2.202676 GCGACTCTCCCTCTTGCG 60.203 66.667 0.00 0.00 0.00 4.85
435 436 2.202676 CGACTCTCCCTCTTGCGC 60.203 66.667 0.00 0.00 0.00 6.09
436 437 2.705821 CGACTCTCCCTCTTGCGCT 61.706 63.158 9.73 0.00 0.00 5.92
437 438 1.153667 GACTCTCCCTCTTGCGCTG 60.154 63.158 9.73 1.08 0.00 5.18
438 439 1.599606 GACTCTCCCTCTTGCGCTGA 61.600 60.000 9.73 6.21 0.00 4.26
439 440 1.153667 CTCTCCCTCTTGCGCTGAC 60.154 63.158 9.73 0.00 0.00 3.51
440 441 2.125350 CTCCCTCTTGCGCTGACC 60.125 66.667 9.73 0.00 0.00 4.02
441 442 3.672295 CTCCCTCTTGCGCTGACCC 62.672 68.421 9.73 0.00 0.00 4.46
442 443 4.020617 CCCTCTTGCGCTGACCCA 62.021 66.667 9.73 0.00 0.00 4.51
443 444 2.435586 CCTCTTGCGCTGACCCAG 60.436 66.667 9.73 0.00 34.12 4.45
444 445 2.435586 CTCTTGCGCTGACCCAGG 60.436 66.667 9.73 0.00 31.21 4.45
445 446 4.704833 TCTTGCGCTGACCCAGGC 62.705 66.667 9.73 0.00 31.21 4.85
468 469 4.803426 CAGCGGTCGCACTCCCTC 62.803 72.222 17.71 0.00 44.88 4.30
472 473 4.803426 GGTCGCACTCCCTCGCAG 62.803 72.222 0.00 0.00 0.00 5.18
473 474 4.803426 GTCGCACTCCCTCGCAGG 62.803 72.222 0.00 0.00 34.30 4.85
476 477 4.008933 GCACTCCCTCGCAGGTGT 62.009 66.667 0.00 0.00 31.93 4.16
477 478 2.047844 CACTCCCTCGCAGGTGTG 60.048 66.667 10.14 10.14 42.96 3.82
478 479 3.314331 ACTCCCTCGCAGGTGTGG 61.314 66.667 2.18 0.00 32.49 4.17
479 480 4.767255 CTCCCTCGCAGGTGTGGC 62.767 72.222 2.18 0.00 31.93 5.01
481 482 4.641645 CCCTCGCAGGTGTGGCAA 62.642 66.667 0.00 0.00 31.93 4.52
482 483 2.360350 CCTCGCAGGTGTGGCAAT 60.360 61.111 0.00 0.00 0.00 3.56
483 484 2.693762 CCTCGCAGGTGTGGCAATG 61.694 63.158 0.00 0.00 0.00 2.82
484 485 2.672651 TCGCAGGTGTGGCAATGG 60.673 61.111 0.00 0.00 0.00 3.16
485 486 4.424566 CGCAGGTGTGGCAATGGC 62.425 66.667 0.00 0.00 40.13 4.40
486 487 3.304721 GCAGGTGTGGCAATGGCA 61.305 61.111 5.05 5.05 43.71 4.92
487 488 2.967397 CAGGTGTGGCAATGGCAG 59.033 61.111 10.55 0.00 43.71 4.85
488 489 2.993264 AGGTGTGGCAATGGCAGC 60.993 61.111 10.55 6.24 43.71 5.25
489 490 4.424566 GGTGTGGCAATGGCAGCG 62.425 66.667 10.55 0.00 43.71 5.18
490 491 4.424566 GTGTGGCAATGGCAGCGG 62.425 66.667 10.55 0.00 43.71 5.52
497 498 4.197498 AATGGCAGCGGCGATTGC 62.197 61.111 23.00 23.00 45.22 3.56
501 502 3.934684 GCAGCGGCGATTGCTCTC 61.935 66.667 23.53 0.00 41.72 3.20
502 503 2.202851 CAGCGGCGATTGCTCTCT 60.203 61.111 12.98 0.00 41.72 3.10
503 504 2.105930 AGCGGCGATTGCTCTCTC 59.894 61.111 12.98 0.00 38.62 3.20
504 505 2.202797 GCGGCGATTGCTCTCTCA 60.203 61.111 12.98 0.00 42.25 3.27
505 506 2.520904 GCGGCGATTGCTCTCTCAC 61.521 63.158 12.98 0.00 42.25 3.51
506 507 1.880340 CGGCGATTGCTCTCTCACC 60.880 63.158 0.00 0.00 42.25 4.02
507 508 1.519719 GGCGATTGCTCTCTCACCT 59.480 57.895 4.59 0.00 42.25 4.00
508 509 0.809241 GGCGATTGCTCTCTCACCTG 60.809 60.000 4.59 0.00 42.25 4.00
509 510 1.427592 GCGATTGCTCTCTCACCTGC 61.428 60.000 0.00 0.00 38.39 4.85
510 511 1.144565 CGATTGCTCTCTCACCTGCG 61.145 60.000 0.00 0.00 0.00 5.18
511 512 0.809241 GATTGCTCTCTCACCTGCGG 60.809 60.000 0.00 0.00 0.00 5.69
512 513 2.866085 ATTGCTCTCTCACCTGCGGC 62.866 60.000 0.00 0.00 0.00 6.53
514 515 4.504916 CTCTCTCACCTGCGGCGG 62.505 72.222 9.78 0.65 0.00 6.13
516 517 4.504916 CTCTCACCTGCGGCGGAG 62.505 72.222 22.23 22.23 0.00 4.63
530 531 3.290776 CGGAGCTAGGGTTATGCAC 57.709 57.895 0.00 0.00 0.00 4.57
531 532 0.249911 CGGAGCTAGGGTTATGCACC 60.250 60.000 0.00 0.00 46.46 5.01
539 540 1.727467 GGTTATGCACCGTCATGGC 59.273 57.895 0.00 0.00 43.94 4.40
540 541 1.029408 GGTTATGCACCGTCATGGCA 61.029 55.000 0.00 0.00 43.94 4.92
541 542 0.808125 GTTATGCACCGTCATGGCAA 59.192 50.000 0.00 0.00 43.94 4.52
542 543 1.405105 GTTATGCACCGTCATGGCAAT 59.595 47.619 0.00 0.00 43.94 3.56
543 544 1.023502 TATGCACCGTCATGGCAATG 58.976 50.000 0.00 0.00 43.94 2.82
544 545 1.669049 ATGCACCGTCATGGCAATGG 61.669 55.000 0.00 0.00 43.94 3.16
545 546 2.491152 CACCGTCATGGCAATGGC 59.509 61.111 0.00 0.00 43.94 4.40
564 565 4.862092 AGCGCAGGCGATGTCGAG 62.862 66.667 18.96 0.00 46.35 4.04
567 568 4.854784 GCAGGCGATGTCGAGCGA 62.855 66.667 6.60 0.00 43.02 4.93
568 569 2.202610 CAGGCGATGTCGAGCGAA 60.203 61.111 6.60 0.00 43.02 4.70
569 570 2.202623 AGGCGATGTCGAGCGAAC 60.203 61.111 6.60 0.00 43.02 3.95
570 571 3.607987 GGCGATGTCGAGCGAACG 61.608 66.667 6.60 2.93 43.02 3.95
571 572 2.576053 GCGATGTCGAGCGAACGA 60.576 61.111 6.60 0.61 43.02 3.85
577 578 4.434938 TCGAGCGAACGACGACGG 62.435 66.667 12.58 0.00 45.77 4.79
582 583 3.730761 CGAACGACGACGGGGAGT 61.731 66.667 12.58 0.00 45.77 3.85
583 584 2.390599 CGAACGACGACGGGGAGTA 61.391 63.158 12.58 0.00 45.77 2.59
584 585 1.875963 GAACGACGACGGGGAGTAA 59.124 57.895 12.58 0.00 44.46 2.24
585 586 0.453390 GAACGACGACGGGGAGTAAT 59.547 55.000 12.58 0.00 44.46 1.89
586 587 0.453390 AACGACGACGGGGAGTAATC 59.547 55.000 12.58 0.00 44.46 1.75
587 588 0.677731 ACGACGACGGGGAGTAATCA 60.678 55.000 12.58 0.00 44.46 2.57
588 589 0.029035 CGACGACGGGGAGTAATCAG 59.971 60.000 0.00 0.00 35.72 2.90
589 590 1.386533 GACGACGGGGAGTAATCAGA 58.613 55.000 0.00 0.00 0.00 3.27
590 591 1.955080 GACGACGGGGAGTAATCAGAT 59.045 52.381 0.00 0.00 0.00 2.90
591 592 1.681793 ACGACGGGGAGTAATCAGATG 59.318 52.381 0.00 0.00 0.00 2.90
592 593 1.000163 CGACGGGGAGTAATCAGATGG 60.000 57.143 0.00 0.00 0.00 3.51
593 594 2.317040 GACGGGGAGTAATCAGATGGA 58.683 52.381 0.00 0.00 0.00 3.41
594 595 2.900546 GACGGGGAGTAATCAGATGGAT 59.099 50.000 0.00 0.00 38.05 3.41
595 596 2.634940 ACGGGGAGTAATCAGATGGATG 59.365 50.000 0.00 0.00 36.02 3.51
596 597 2.634940 CGGGGAGTAATCAGATGGATGT 59.365 50.000 0.00 0.00 36.02 3.06
597 598 3.832490 CGGGGAGTAATCAGATGGATGTA 59.168 47.826 0.00 0.00 36.02 2.29
598 599 4.467795 CGGGGAGTAATCAGATGGATGTAT 59.532 45.833 0.00 0.00 36.02 2.29
599 600 5.046304 CGGGGAGTAATCAGATGGATGTATT 60.046 44.000 0.00 0.00 36.02 1.89
600 601 6.520742 CGGGGAGTAATCAGATGGATGTATTT 60.521 42.308 0.00 0.00 36.02 1.40
601 602 7.234355 GGGGAGTAATCAGATGGATGTATTTT 58.766 38.462 0.00 0.00 36.02 1.82
602 603 7.725844 GGGGAGTAATCAGATGGATGTATTTTT 59.274 37.037 0.00 0.00 36.02 1.94
603 604 8.787852 GGGAGTAATCAGATGGATGTATTTTTC 58.212 37.037 0.00 0.00 36.02 2.29
604 605 9.566432 GGAGTAATCAGATGGATGTATTTTTCT 57.434 33.333 0.00 0.00 36.02 2.52
611 612 8.742777 TCAGATGGATGTATTTTTCTTTTCTGG 58.257 33.333 0.00 0.00 0.00 3.86
612 613 8.742777 CAGATGGATGTATTTTTCTTTTCTGGA 58.257 33.333 0.00 0.00 0.00 3.86
613 614 8.743714 AGATGGATGTATTTTTCTTTTCTGGAC 58.256 33.333 0.00 0.00 0.00 4.02
614 615 8.655935 ATGGATGTATTTTTCTTTTCTGGACT 57.344 30.769 0.00 0.00 0.00 3.85
615 616 7.885297 TGGATGTATTTTTCTTTTCTGGACTG 58.115 34.615 0.00 0.00 0.00 3.51
616 617 7.039784 TGGATGTATTTTTCTTTTCTGGACTGG 60.040 37.037 0.00 0.00 0.00 4.00
617 618 6.648879 TGTATTTTTCTTTTCTGGACTGGG 57.351 37.500 0.00 0.00 0.00 4.45
618 619 4.607293 ATTTTTCTTTTCTGGACTGGGC 57.393 40.909 0.00 0.00 0.00 5.36
619 620 1.995376 TTTCTTTTCTGGACTGGGCC 58.005 50.000 0.00 0.00 0.00 5.80
620 621 0.250727 TTCTTTTCTGGACTGGGCCG 60.251 55.000 0.00 0.00 0.00 6.13
621 622 1.073199 CTTTTCTGGACTGGGCCGT 59.927 57.895 0.00 0.00 0.00 5.68
622 623 0.323629 CTTTTCTGGACTGGGCCGTA 59.676 55.000 0.00 0.00 0.00 4.02
623 624 0.988832 TTTTCTGGACTGGGCCGTAT 59.011 50.000 0.00 0.00 0.00 3.06
624 625 0.539986 TTTCTGGACTGGGCCGTATC 59.460 55.000 0.00 0.00 0.00 2.24
625 626 0.325296 TTCTGGACTGGGCCGTATCT 60.325 55.000 0.00 0.00 0.00 1.98
626 627 0.755698 TCTGGACTGGGCCGTATCTC 60.756 60.000 0.00 0.00 0.00 2.75
627 628 0.757188 CTGGACTGGGCCGTATCTCT 60.757 60.000 0.00 0.00 0.00 3.10
628 629 0.325296 TGGACTGGGCCGTATCTCTT 60.325 55.000 0.00 0.00 0.00 2.85
629 630 0.389757 GGACTGGGCCGTATCTCTTC 59.610 60.000 0.00 0.00 0.00 2.87
630 631 1.404843 GACTGGGCCGTATCTCTTCT 58.595 55.000 0.00 0.00 0.00 2.85
631 632 1.067821 GACTGGGCCGTATCTCTTCTG 59.932 57.143 0.00 0.00 0.00 3.02
632 633 0.390860 CTGGGCCGTATCTCTTCTGG 59.609 60.000 0.00 0.00 0.00 3.86
633 634 1.048724 TGGGCCGTATCTCTTCTGGG 61.049 60.000 0.00 0.00 0.00 4.45
634 635 1.069935 GGCCGTATCTCTTCTGGGC 59.930 63.158 0.00 0.00 39.79 5.36
635 636 1.403687 GGCCGTATCTCTTCTGGGCT 61.404 60.000 0.00 0.00 41.65 5.19
636 637 0.249657 GCCGTATCTCTTCTGGGCTG 60.250 60.000 0.00 0.00 37.57 4.85
637 638 0.390860 CCGTATCTCTTCTGGGCTGG 59.609 60.000 0.00 0.00 0.00 4.85
638 639 0.249657 CGTATCTCTTCTGGGCTGGC 60.250 60.000 0.00 0.00 0.00 4.85
639 640 0.833287 GTATCTCTTCTGGGCTGGCA 59.167 55.000 2.88 0.00 0.00 4.92
640 641 1.419387 GTATCTCTTCTGGGCTGGCAT 59.581 52.381 2.88 0.00 0.00 4.40
641 642 0.924823 ATCTCTTCTGGGCTGGCATT 59.075 50.000 2.88 0.00 0.00 3.56
642 643 0.254178 TCTCTTCTGGGCTGGCATTC 59.746 55.000 2.88 0.00 0.00 2.67
643 644 0.750911 CTCTTCTGGGCTGGCATTCC 60.751 60.000 2.88 0.00 0.00 3.01
644 645 1.210204 TCTTCTGGGCTGGCATTCCT 61.210 55.000 2.88 0.00 0.00 3.36
645 646 0.750911 CTTCTGGGCTGGCATTCCTC 60.751 60.000 2.88 0.00 0.00 3.71
646 647 1.210204 TTCTGGGCTGGCATTCCTCT 61.210 55.000 2.88 0.00 0.00 3.69
647 648 1.453379 CTGGGCTGGCATTCCTCTG 60.453 63.158 2.88 0.00 0.00 3.35
648 649 2.832201 GGGCTGGCATTCCTCTGC 60.832 66.667 2.88 0.00 41.53 4.26
649 650 2.274760 GGCTGGCATTCCTCTGCT 59.725 61.111 0.00 0.00 41.95 4.24
650 651 1.379576 GGCTGGCATTCCTCTGCTT 60.380 57.895 0.00 0.00 41.95 3.91
651 652 0.969409 GGCTGGCATTCCTCTGCTTT 60.969 55.000 0.00 0.00 41.95 3.51
652 653 0.455005 GCTGGCATTCCTCTGCTTTC 59.545 55.000 0.00 0.00 41.95 2.62
653 654 1.954258 GCTGGCATTCCTCTGCTTTCT 60.954 52.381 0.00 0.00 41.95 2.52
654 655 2.681976 GCTGGCATTCCTCTGCTTTCTA 60.682 50.000 0.00 0.00 41.95 2.10
655 656 3.614092 CTGGCATTCCTCTGCTTTCTAA 58.386 45.455 0.00 0.00 41.95 2.10
656 657 3.347216 TGGCATTCCTCTGCTTTCTAAC 58.653 45.455 0.00 0.00 41.95 2.34
657 658 3.009473 TGGCATTCCTCTGCTTTCTAACT 59.991 43.478 0.00 0.00 41.95 2.24
658 659 3.625313 GGCATTCCTCTGCTTTCTAACTC 59.375 47.826 0.00 0.00 41.95 3.01
659 660 4.512484 GCATTCCTCTGCTTTCTAACTCT 58.488 43.478 0.00 0.00 39.12 3.24
660 661 4.332268 GCATTCCTCTGCTTTCTAACTCTG 59.668 45.833 0.00 0.00 39.12 3.35
661 662 5.486526 CATTCCTCTGCTTTCTAACTCTGT 58.513 41.667 0.00 0.00 0.00 3.41
662 663 5.552870 TTCCTCTGCTTTCTAACTCTGTT 57.447 39.130 0.00 0.00 0.00 3.16
663 664 5.552870 TCCTCTGCTTTCTAACTCTGTTT 57.447 39.130 0.00 0.00 0.00 2.83
664 665 5.542779 TCCTCTGCTTTCTAACTCTGTTTC 58.457 41.667 0.00 0.00 0.00 2.78
665 666 4.693095 CCTCTGCTTTCTAACTCTGTTTCC 59.307 45.833 0.00 0.00 0.00 3.13
666 667 4.642429 TCTGCTTTCTAACTCTGTTTCCC 58.358 43.478 0.00 0.00 0.00 3.97
667 668 4.348168 TCTGCTTTCTAACTCTGTTTCCCT 59.652 41.667 0.00 0.00 0.00 4.20
668 669 4.389374 TGCTTTCTAACTCTGTTTCCCTG 58.611 43.478 0.00 0.00 0.00 4.45
669 670 3.753797 GCTTTCTAACTCTGTTTCCCTGG 59.246 47.826 0.00 0.00 0.00 4.45
670 671 4.747009 GCTTTCTAACTCTGTTTCCCTGGT 60.747 45.833 0.00 0.00 0.00 4.00
671 672 5.377478 CTTTCTAACTCTGTTTCCCTGGTT 58.623 41.667 0.00 0.00 0.00 3.67
672 673 4.618920 TCTAACTCTGTTTCCCTGGTTC 57.381 45.455 0.00 0.00 0.00 3.62
673 674 2.658807 AACTCTGTTTCCCTGGTTCC 57.341 50.000 0.00 0.00 0.00 3.62
674 675 0.771755 ACTCTGTTTCCCTGGTTCCC 59.228 55.000 0.00 0.00 0.00 3.97
675 676 0.771127 CTCTGTTTCCCTGGTTCCCA 59.229 55.000 0.00 0.00 0.00 4.37
676 677 0.476771 TCTGTTTCCCTGGTTCCCAC 59.523 55.000 0.00 0.00 0.00 4.61
677 678 0.478507 CTGTTTCCCTGGTTCCCACT 59.521 55.000 0.00 0.00 0.00 4.00
678 679 0.930726 TGTTTCCCTGGTTCCCACTT 59.069 50.000 0.00 0.00 0.00 3.16
679 680 1.328279 GTTTCCCTGGTTCCCACTTG 58.672 55.000 0.00 0.00 0.00 3.16
680 681 0.469144 TTTCCCTGGTTCCCACTTGC 60.469 55.000 0.00 0.00 0.00 4.01
681 682 1.360393 TTCCCTGGTTCCCACTTGCT 61.360 55.000 0.00 0.00 0.00 3.91
682 683 1.604593 CCCTGGTTCCCACTTGCTG 60.605 63.158 0.00 0.00 0.00 4.41
683 684 2.270986 CCTGGTTCCCACTTGCTGC 61.271 63.158 0.00 0.00 0.00 5.25
684 685 2.203480 TGGTTCCCACTTGCTGCC 60.203 61.111 0.00 0.00 0.00 4.85
685 686 3.365265 GGTTCCCACTTGCTGCCG 61.365 66.667 0.00 0.00 0.00 5.69
686 687 2.594592 GTTCCCACTTGCTGCCGT 60.595 61.111 0.00 0.00 0.00 5.68
687 688 2.281484 TTCCCACTTGCTGCCGTC 60.281 61.111 0.00 0.00 0.00 4.79
688 689 4.680237 TCCCACTTGCTGCCGTCG 62.680 66.667 0.00 0.00 0.00 5.12
690 691 4.680237 CCACTTGCTGCCGTCGGA 62.680 66.667 17.49 0.00 0.00 4.55
691 692 2.434884 CACTTGCTGCCGTCGGAT 60.435 61.111 17.49 0.00 0.00 4.18
692 693 2.434884 ACTTGCTGCCGTCGGATG 60.435 61.111 17.49 7.55 0.00 3.51
693 694 3.197790 CTTGCTGCCGTCGGATGG 61.198 66.667 17.49 12.04 0.00 3.51
700 701 4.147449 CCGTCGGATGGCTGCTGA 62.147 66.667 4.91 0.00 0.00 4.26
701 702 2.125552 CGTCGGATGGCTGCTGAA 60.126 61.111 0.00 0.00 0.00 3.02
702 703 2.456119 CGTCGGATGGCTGCTGAAC 61.456 63.158 0.00 0.00 0.00 3.18
703 704 2.125552 TCGGATGGCTGCTGAACG 60.126 61.111 0.00 0.28 0.00 3.95
704 705 3.197790 CGGATGGCTGCTGAACGG 61.198 66.667 0.00 0.00 0.00 4.44
705 706 2.045926 GGATGGCTGCTGAACGGT 60.046 61.111 0.00 0.00 0.00 4.83
706 707 2.401766 GGATGGCTGCTGAACGGTG 61.402 63.158 0.00 0.00 0.00 4.94
707 708 1.375908 GATGGCTGCTGAACGGTGA 60.376 57.895 0.00 0.00 0.00 4.02
708 709 0.745845 GATGGCTGCTGAACGGTGAT 60.746 55.000 0.00 0.00 0.00 3.06
709 710 1.028330 ATGGCTGCTGAACGGTGATG 61.028 55.000 0.00 0.00 0.00 3.07
710 711 2.482374 GCTGCTGAACGGTGATGC 59.518 61.111 0.00 0.00 0.00 3.91
711 712 3.044059 GCTGCTGAACGGTGATGCC 62.044 63.158 0.00 0.00 0.00 4.40
712 713 1.672030 CTGCTGAACGGTGATGCCA 60.672 57.895 0.00 0.00 36.97 4.92
713 714 1.642037 CTGCTGAACGGTGATGCCAG 61.642 60.000 0.00 0.00 36.97 4.85
714 715 1.375908 GCTGAACGGTGATGCCAGA 60.376 57.895 0.00 0.00 36.97 3.86
715 716 0.955428 GCTGAACGGTGATGCCAGAA 60.955 55.000 0.00 0.00 36.97 3.02
716 717 1.081892 CTGAACGGTGATGCCAGAAG 58.918 55.000 0.00 0.00 36.97 2.85
717 718 0.321564 TGAACGGTGATGCCAGAAGG 60.322 55.000 0.00 0.00 36.97 3.46
718 719 0.036388 GAACGGTGATGCCAGAAGGA 60.036 55.000 0.00 0.00 36.89 3.36
719 720 0.321653 AACGGTGATGCCAGAAGGAC 60.322 55.000 0.00 0.00 36.89 3.85
720 721 1.811266 CGGTGATGCCAGAAGGACG 60.811 63.158 0.00 0.00 36.89 4.79
721 722 1.296715 GGTGATGCCAGAAGGACGT 59.703 57.895 0.00 0.00 36.89 4.34
722 723 0.741221 GGTGATGCCAGAAGGACGTC 60.741 60.000 7.13 7.13 36.89 4.34
723 724 0.741221 GTGATGCCAGAAGGACGTCC 60.741 60.000 27.67 27.67 36.89 4.79
724 725 1.153349 GATGCCAGAAGGACGTCCC 60.153 63.158 30.82 16.68 36.89 4.46
735 736 2.035312 ACGTCCCTCGGCAGTAGT 59.965 61.111 0.00 0.00 44.69 2.73
736 737 1.605738 ACGTCCCTCGGCAGTAGTT 60.606 57.895 0.00 0.00 44.69 2.24
737 738 1.183676 ACGTCCCTCGGCAGTAGTTT 61.184 55.000 0.00 0.00 44.69 2.66
738 739 0.458025 CGTCCCTCGGCAGTAGTTTC 60.458 60.000 0.00 0.00 35.71 2.78
739 740 0.606604 GTCCCTCGGCAGTAGTTTCA 59.393 55.000 0.00 0.00 0.00 2.69
740 741 1.001633 GTCCCTCGGCAGTAGTTTCAA 59.998 52.381 0.00 0.00 0.00 2.69
741 742 1.001633 TCCCTCGGCAGTAGTTTCAAC 59.998 52.381 0.00 0.00 0.00 3.18
742 743 1.439679 CCTCGGCAGTAGTTTCAACC 58.560 55.000 0.00 0.00 0.00 3.77
743 744 1.002087 CCTCGGCAGTAGTTTCAACCT 59.998 52.381 0.00 0.00 0.00 3.50
744 745 2.232941 CCTCGGCAGTAGTTTCAACCTA 59.767 50.000 0.00 0.00 0.00 3.08
745 746 3.251571 CTCGGCAGTAGTTTCAACCTAC 58.748 50.000 0.00 0.00 0.00 3.18
746 747 1.990563 CGGCAGTAGTTTCAACCTACG 59.009 52.381 0.00 0.00 0.00 3.51
747 748 2.608752 CGGCAGTAGTTTCAACCTACGT 60.609 50.000 0.00 0.00 0.00 3.57
748 749 3.396560 GGCAGTAGTTTCAACCTACGTT 58.603 45.455 0.00 0.00 0.00 3.99
749 750 4.559153 GGCAGTAGTTTCAACCTACGTTA 58.441 43.478 0.00 0.00 0.00 3.18
750 751 4.624452 GGCAGTAGTTTCAACCTACGTTAG 59.376 45.833 0.00 0.00 0.00 2.34
751 752 5.464168 GCAGTAGTTTCAACCTACGTTAGA 58.536 41.667 0.00 0.00 0.00 2.10
752 753 5.572126 GCAGTAGTTTCAACCTACGTTAGAG 59.428 44.000 0.00 0.00 0.00 2.43
753 754 6.091437 CAGTAGTTTCAACCTACGTTAGAGG 58.909 44.000 0.00 0.00 40.22 3.69
754 755 6.006449 AGTAGTTTCAACCTACGTTAGAGGA 58.994 40.000 9.86 0.00 37.53 3.71
755 756 5.997384 AGTTTCAACCTACGTTAGAGGAT 57.003 39.130 9.86 0.00 37.53 3.24
756 757 5.963594 AGTTTCAACCTACGTTAGAGGATC 58.036 41.667 9.86 0.00 37.53 3.36
1478 1667 0.040058 ATCAATGGGGCAGTGCTTCA 59.960 50.000 16.11 13.66 29.02 3.02
1708 1915 3.069586 CGCTGTGATGGTTAGGGATTCTA 59.930 47.826 0.00 0.00 0.00 2.10
2313 2618 6.056428 ACCTCTTCAACGTACAACAATTTC 57.944 37.500 0.00 0.00 0.00 2.17
2965 4628 5.136711 GTCAAATTTGTTTGTAATTGGCGC 58.863 37.500 17.47 0.00 33.82 6.53
2988 4651 8.261908 GCGCATAATTGTTCATTTTATCACTTC 58.738 33.333 0.30 0.00 0.00 3.01
3597 5393 3.045601 TGAGCAGGTAAGCTTCTGAAC 57.954 47.619 17.04 10.62 46.75 3.18
3735 5536 3.112263 TGCTTAGCTATTACCCACCTGT 58.888 45.455 5.60 0.00 0.00 4.00
3948 5767 4.593956 CCTTGCTTTCATTTACCTCCTCT 58.406 43.478 0.00 0.00 0.00 3.69
3960 5787 1.437547 ACCTCCTCTTTGGTACTCCCT 59.562 52.381 0.00 0.00 34.36 4.20
3989 5816 5.637810 TCCTACTGTTAGTGCAATTTCTTCG 59.362 40.000 0.00 0.00 0.00 3.79
4008 5836 2.158593 TCGCCTCTAGCTCCTTAGATGT 60.159 50.000 0.00 0.00 40.39 3.06
4055 5884 6.648725 TCCTTTTTGTGCATATTTTAAGTGGC 59.351 34.615 0.00 0.00 0.00 5.01
4085 5914 5.125100 TGAAATGCATCCTCTTTTGTGTC 57.875 39.130 0.00 0.00 0.00 3.67
4089 5918 1.464997 GCATCCTCTTTTGTGTCCGTC 59.535 52.381 0.00 0.00 0.00 4.79
4096 5925 4.216257 CCTCTTTTGTGTCCGTCATTCATT 59.784 41.667 0.00 0.00 0.00 2.57
4159 5988 9.821240 AGATCTATCAAGTCCTAGTGTGATTAT 57.179 33.333 0.00 0.00 32.99 1.28
4164 5993 8.727100 ATCAAGTCCTAGTGTGATTATATGGA 57.273 34.615 0.00 0.00 0.00 3.41
4221 6050 5.437289 TCATGCTTTCTTTGTTACACAGG 57.563 39.130 0.00 0.00 0.00 4.00
4222 6051 4.278170 TCATGCTTTCTTTGTTACACAGGG 59.722 41.667 0.00 0.00 0.00 4.45
4270 6099 5.414144 TCACATCGCTGTTTATTTTGGATCA 59.586 36.000 0.00 0.00 31.62 2.92
4486 6315 0.042708 GCATCTATGCGTTGTGAGCG 60.043 55.000 0.00 0.00 44.67 5.03
4511 6340 1.967319 TGTTCTTCACTCTTGGCCAC 58.033 50.000 3.88 0.00 0.00 5.01
4514 6343 0.033504 TCTTCACTCTTGGCCACGTC 59.966 55.000 3.88 0.00 0.00 4.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.377193 TGGCCCTGTACCAAACTTGTAT 59.623 45.455 0.00 0.00 33.12 2.29
1 2 1.775459 TGGCCCTGTACCAAACTTGTA 59.225 47.619 0.00 0.00 33.12 2.41
2 3 0.553819 TGGCCCTGTACCAAACTTGT 59.446 50.000 0.00 0.00 33.12 3.16
3 4 1.698506 TTGGCCCTGTACCAAACTTG 58.301 50.000 0.00 0.00 44.11 3.16
8 9 0.770557 AGAGGTTGGCCCTGTACCAA 60.771 55.000 0.00 0.00 46.51 3.67
9 10 0.117541 TAGAGGTTGGCCCTGTACCA 59.882 55.000 0.00 0.00 46.51 3.25
10 11 0.831307 CTAGAGGTTGGCCCTGTACC 59.169 60.000 0.00 2.46 46.51 3.34
11 12 0.178301 GCTAGAGGTTGGCCCTGTAC 59.822 60.000 0.00 0.00 46.51 2.90
12 13 0.252513 TGCTAGAGGTTGGCCCTGTA 60.253 55.000 0.00 0.00 46.51 2.74
13 14 1.538876 TGCTAGAGGTTGGCCCTGT 60.539 57.895 0.00 0.00 46.51 4.00
14 15 1.078143 GTGCTAGAGGTTGGCCCTG 60.078 63.158 0.00 0.00 46.51 4.45
16 17 1.853250 AAGGTGCTAGAGGTTGGCCC 61.853 60.000 0.00 0.00 34.57 5.80
17 18 0.678048 CAAGGTGCTAGAGGTTGGCC 60.678 60.000 0.00 0.00 31.13 5.36
18 19 0.678048 CCAAGGTGCTAGAGGTTGGC 60.678 60.000 0.00 0.00 31.76 4.52
19 20 0.693049 ACCAAGGTGCTAGAGGTTGG 59.307 55.000 10.45 10.45 42.89 3.77
20 21 2.301870 TGTACCAAGGTGCTAGAGGTTG 59.698 50.000 8.76 0.00 33.91 3.77
21 22 2.302157 GTGTACCAAGGTGCTAGAGGTT 59.698 50.000 8.76 0.00 33.91 3.50
22 23 1.900486 GTGTACCAAGGTGCTAGAGGT 59.100 52.381 8.76 0.00 36.40 3.85
23 24 1.899814 TGTGTACCAAGGTGCTAGAGG 59.100 52.381 8.76 0.00 0.00 3.69
24 25 2.675317 GCTGTGTACCAAGGTGCTAGAG 60.675 54.545 8.76 4.73 0.00 2.43
25 26 1.275291 GCTGTGTACCAAGGTGCTAGA 59.725 52.381 8.76 0.00 0.00 2.43
26 27 1.276421 AGCTGTGTACCAAGGTGCTAG 59.724 52.381 8.76 8.00 0.00 3.42
27 28 1.001974 CAGCTGTGTACCAAGGTGCTA 59.998 52.381 5.25 0.00 0.00 3.49
28 29 0.250467 CAGCTGTGTACCAAGGTGCT 60.250 55.000 5.25 2.31 0.00 4.40
29 30 0.250295 TCAGCTGTGTACCAAGGTGC 60.250 55.000 14.67 0.47 0.00 5.01
30 31 2.254546 TTCAGCTGTGTACCAAGGTG 57.745 50.000 14.67 14.68 0.00 4.00
31 32 3.290948 TTTTCAGCTGTGTACCAAGGT 57.709 42.857 14.67 0.00 0.00 3.50
32 33 3.380004 TGTTTTTCAGCTGTGTACCAAGG 59.620 43.478 14.67 0.00 0.00 3.61
33 34 4.630894 TGTTTTTCAGCTGTGTACCAAG 57.369 40.909 14.67 0.00 0.00 3.61
34 35 4.642437 TGATGTTTTTCAGCTGTGTACCAA 59.358 37.500 14.67 0.00 33.14 3.67
35 36 4.203226 TGATGTTTTTCAGCTGTGTACCA 58.797 39.130 14.67 7.08 33.14 3.25
36 37 4.787598 CTGATGTTTTTCAGCTGTGTACC 58.212 43.478 14.67 1.15 36.96 3.34
45 46 6.757897 TGGGTTATAGCTGATGTTTTTCAG 57.242 37.500 0.00 0.00 44.87 3.02
46 47 7.531857 TTTGGGTTATAGCTGATGTTTTTCA 57.468 32.000 0.00 0.00 0.00 2.69
47 48 8.250332 TGATTTGGGTTATAGCTGATGTTTTTC 58.750 33.333 0.00 0.00 0.00 2.29
48 49 8.133024 TGATTTGGGTTATAGCTGATGTTTTT 57.867 30.769 0.00 0.00 0.00 1.94
49 50 7.716799 TGATTTGGGTTATAGCTGATGTTTT 57.283 32.000 0.00 0.00 0.00 2.43
50 51 7.560991 TGATGATTTGGGTTATAGCTGATGTTT 59.439 33.333 0.00 0.00 0.00 2.83
51 52 7.062322 TGATGATTTGGGTTATAGCTGATGTT 58.938 34.615 0.00 0.00 0.00 2.71
52 53 6.604171 TGATGATTTGGGTTATAGCTGATGT 58.396 36.000 0.00 0.00 0.00 3.06
53 54 7.514784 TTGATGATTTGGGTTATAGCTGATG 57.485 36.000 0.00 0.00 0.00 3.07
54 55 7.946219 TCATTGATGATTTGGGTTATAGCTGAT 59.054 33.333 0.00 0.00 0.00 2.90
55 56 7.289310 TCATTGATGATTTGGGTTATAGCTGA 58.711 34.615 0.00 0.00 0.00 4.26
56 57 7.514784 TCATTGATGATTTGGGTTATAGCTG 57.485 36.000 0.00 0.00 0.00 4.24
57 58 8.716674 ATTCATTGATGATTTGGGTTATAGCT 57.283 30.769 0.00 0.00 36.56 3.32
63 64 9.715121 GCATAATATTCATTGATGATTTGGGTT 57.285 29.630 0.00 0.00 36.56 4.11
64 65 9.096823 AGCATAATATTCATTGATGATTTGGGT 57.903 29.630 0.00 0.00 36.56 4.51
65 66 9.582431 GAGCATAATATTCATTGATGATTTGGG 57.418 33.333 0.00 0.00 36.56 4.12
78 79 9.791820 CTTGTCAATTTGTGAGCATAATATTCA 57.208 29.630 0.00 0.00 36.74 2.57
79 80 8.749499 GCTTGTCAATTTGTGAGCATAATATTC 58.251 33.333 12.87 0.00 36.74 1.75
80 81 8.252417 TGCTTGTCAATTTGTGAGCATAATATT 58.748 29.630 15.06 0.00 36.74 1.28
81 82 7.774134 TGCTTGTCAATTTGTGAGCATAATAT 58.226 30.769 15.06 0.00 36.74 1.28
82 83 7.155655 TGCTTGTCAATTTGTGAGCATAATA 57.844 32.000 15.06 0.32 36.74 0.98
83 84 6.028146 TGCTTGTCAATTTGTGAGCATAAT 57.972 33.333 15.06 0.00 36.74 1.28
84 85 5.450592 TGCTTGTCAATTTGTGAGCATAA 57.549 34.783 15.06 0.00 36.74 1.90
85 86 5.183522 TGATGCTTGTCAATTTGTGAGCATA 59.816 36.000 23.40 15.19 42.58 3.14
86 87 4.021807 TGATGCTTGTCAATTTGTGAGCAT 60.022 37.500 23.49 23.49 44.22 3.79
87 88 3.318557 TGATGCTTGTCAATTTGTGAGCA 59.681 39.130 18.71 18.71 38.76 4.26
88 89 3.904571 TGATGCTTGTCAATTTGTGAGC 58.095 40.909 11.64 11.64 36.74 4.26
89 90 6.389622 CATTGATGCTTGTCAATTTGTGAG 57.610 37.500 9.00 0.00 44.23 3.51
105 106 6.792326 TCAATTTAAGAGCAGAGCATTGATG 58.208 36.000 0.00 0.00 0.00 3.07
106 107 6.827251 TCTCAATTTAAGAGCAGAGCATTGAT 59.173 34.615 0.00 0.00 30.78 2.57
107 108 6.175471 TCTCAATTTAAGAGCAGAGCATTGA 58.825 36.000 0.00 0.00 33.15 2.57
108 109 6.432607 TCTCAATTTAAGAGCAGAGCATTG 57.567 37.500 0.00 0.00 33.15 2.82
109 110 6.432162 TGTTCTCAATTTAAGAGCAGAGCATT 59.568 34.615 1.36 0.00 31.43 3.56
110 111 5.942236 TGTTCTCAATTTAAGAGCAGAGCAT 59.058 36.000 1.36 0.00 31.43 3.79
111 112 5.308014 TGTTCTCAATTTAAGAGCAGAGCA 58.692 37.500 1.36 0.00 31.43 4.26
112 113 5.869753 TGTTCTCAATTTAAGAGCAGAGC 57.130 39.130 1.36 0.00 31.43 4.09
148 149 7.836685 AGGAATCTAGAACTCAGATTGTACTGA 59.163 37.037 0.00 0.00 41.66 3.41
149 150 8.006298 AGGAATCTAGAACTCAGATTGTACTG 57.994 38.462 0.00 0.00 41.66 2.74
150 151 9.702253 TTAGGAATCTAGAACTCAGATTGTACT 57.298 33.333 0.00 1.99 41.66 2.73
151 152 9.738832 GTTAGGAATCTAGAACTCAGATTGTAC 57.261 37.037 0.00 0.00 41.66 2.90
152 153 9.475620 TGTTAGGAATCTAGAACTCAGATTGTA 57.524 33.333 0.00 0.00 41.66 2.41
153 154 8.367660 TGTTAGGAATCTAGAACTCAGATTGT 57.632 34.615 0.00 0.00 41.66 2.71
154 155 9.658799 TTTGTTAGGAATCTAGAACTCAGATTG 57.341 33.333 0.00 0.00 41.66 2.67
229 230 0.898320 GGAGGCAGACAGTAGCTCAA 59.102 55.000 0.00 0.00 0.00 3.02
240 241 1.303282 TGACGCTAGAGGAGGCAGA 59.697 57.895 0.00 0.00 0.00 4.26
270 271 3.432051 ATAGCCTGGAGTGCGTCGC 62.432 63.158 11.10 11.10 0.00 5.19
271 272 1.589993 CATAGCCTGGAGTGCGTCG 60.590 63.158 0.00 0.00 0.00 5.12
326 327 1.295357 CCAAGTATGTGCCGCGTTGA 61.295 55.000 4.92 0.00 0.00 3.18
338 339 4.547367 GCGGGAGGCGCCAAGTAT 62.547 66.667 31.54 7.13 38.95 2.12
369 370 4.758251 TCTGCACCATGCCGTCGG 62.758 66.667 6.99 6.99 44.23 4.79
370 371 3.490759 GTCTGCACCATGCCGTCG 61.491 66.667 0.00 0.00 44.23 5.12
371 372 2.358615 TGTCTGCACCATGCCGTC 60.359 61.111 0.00 0.00 44.23 4.79
372 373 2.669569 GTGTCTGCACCATGCCGT 60.670 61.111 0.00 0.00 44.23 5.68
373 374 3.792047 CGTGTCTGCACCATGCCG 61.792 66.667 0.00 0.00 44.23 5.69
374 375 4.107051 GCGTGTCTGCACCATGCC 62.107 66.667 12.71 0.00 44.23 4.40
375 376 4.450122 CGCGTGTCTGCACCATGC 62.450 66.667 13.43 13.43 45.29 4.06
376 377 3.792047 CCGCGTGTCTGCACCATG 61.792 66.667 4.92 0.00 42.39 3.66
377 378 4.314440 ACCGCGTGTCTGCACCAT 62.314 61.111 4.92 0.00 42.39 3.55
396 397 4.517815 CAATGCCATGGCCGCCAC 62.518 66.667 33.44 6.02 41.09 5.01
408 409 2.467826 GGAGAGTCGCTGGCAATGC 61.468 63.158 0.00 0.00 0.00 3.56
409 410 1.817099 GGGAGAGTCGCTGGCAATG 60.817 63.158 0.00 0.00 0.00 2.82
410 411 1.965754 GAGGGAGAGTCGCTGGCAAT 61.966 60.000 0.00 0.00 39.94 3.56
411 412 2.604686 AGGGAGAGTCGCTGGCAA 60.605 61.111 0.00 0.00 38.31 4.52
412 413 3.071206 GAGGGAGAGTCGCTGGCA 61.071 66.667 0.00 0.00 39.94 4.92
413 414 2.355193 AAGAGGGAGAGTCGCTGGC 61.355 63.158 0.00 0.00 39.94 4.85
414 415 1.515020 CAAGAGGGAGAGTCGCTGG 59.485 63.158 0.00 0.00 39.94 4.85
415 416 1.153667 GCAAGAGGGAGAGTCGCTG 60.154 63.158 0.00 0.00 39.94 5.18
416 417 2.705821 CGCAAGAGGGAGAGTCGCT 61.706 63.158 0.00 0.00 42.73 4.93
417 418 2.202676 CGCAAGAGGGAGAGTCGC 60.203 66.667 0.00 0.00 43.02 5.19
418 419 2.202676 GCGCAAGAGGGAGAGTCG 60.203 66.667 0.30 0.00 43.02 4.18
419 420 1.153667 CAGCGCAAGAGGGAGAGTC 60.154 63.158 11.47 0.00 43.02 3.36
420 421 1.607756 TCAGCGCAAGAGGGAGAGT 60.608 57.895 11.47 0.00 43.02 3.24
421 422 1.153667 GTCAGCGCAAGAGGGAGAG 60.154 63.158 11.47 0.00 43.02 3.20
422 423 2.650116 GGTCAGCGCAAGAGGGAGA 61.650 63.158 11.47 0.00 43.02 3.71
423 424 2.125350 GGTCAGCGCAAGAGGGAG 60.125 66.667 11.47 0.00 43.02 4.30
424 425 3.706373 GGGTCAGCGCAAGAGGGA 61.706 66.667 11.47 0.00 43.02 4.20
425 426 3.965539 CTGGGTCAGCGCAAGAGGG 62.966 68.421 11.47 0.00 43.02 4.30
426 427 2.435586 CTGGGTCAGCGCAAGAGG 60.436 66.667 11.47 0.00 43.02 3.69
427 428 2.435586 CCTGGGTCAGCGCAAGAG 60.436 66.667 11.47 0.00 43.02 2.85
428 429 4.704833 GCCTGGGTCAGCGCAAGA 62.705 66.667 11.47 3.85 43.02 3.02
451 452 4.803426 GAGGGAGTGCGACCGCTG 62.803 72.222 15.61 0.00 42.51 5.18
455 456 4.803426 CTGCGAGGGAGTGCGACC 62.803 72.222 0.00 0.00 0.00 4.79
456 457 4.803426 CCTGCGAGGGAGTGCGAC 62.803 72.222 0.00 0.00 0.00 5.19
459 460 4.008933 ACACCTGCGAGGGAGTGC 62.009 66.667 7.06 0.00 40.58 4.40
460 461 2.047844 CACACCTGCGAGGGAGTG 60.048 66.667 9.34 9.34 40.58 3.51
461 462 3.314331 CCACACCTGCGAGGGAGT 61.314 66.667 7.06 0.00 40.58 3.85
462 463 4.767255 GCCACACCTGCGAGGGAG 62.767 72.222 7.06 0.00 40.58 4.30
464 465 3.925630 ATTGCCACACCTGCGAGGG 62.926 63.158 7.06 0.00 40.58 4.30
465 466 2.360350 ATTGCCACACCTGCGAGG 60.360 61.111 0.00 1.16 42.49 4.63
466 467 2.693762 CCATTGCCACACCTGCGAG 61.694 63.158 0.00 0.00 0.00 5.03
467 468 2.672651 CCATTGCCACACCTGCGA 60.673 61.111 0.00 0.00 0.00 5.10
468 469 4.424566 GCCATTGCCACACCTGCG 62.425 66.667 0.00 0.00 0.00 5.18
469 470 3.291101 CTGCCATTGCCACACCTGC 62.291 63.158 0.00 0.00 36.33 4.85
470 471 2.967397 CTGCCATTGCCACACCTG 59.033 61.111 0.00 0.00 36.33 4.00
471 472 2.993264 GCTGCCATTGCCACACCT 60.993 61.111 0.00 0.00 36.33 4.00
472 473 4.424566 CGCTGCCATTGCCACACC 62.425 66.667 0.00 0.00 36.33 4.16
473 474 4.424566 CCGCTGCCATTGCCACAC 62.425 66.667 0.00 0.00 36.33 3.82
478 479 4.197498 AATCGCCGCTGCCATTGC 62.197 61.111 0.00 0.00 38.26 3.56
479 480 2.278336 CAATCGCCGCTGCCATTG 60.278 61.111 6.10 6.10 39.22 2.82
480 481 4.197498 GCAATCGCCGCTGCCATT 62.197 61.111 0.00 0.00 32.18 3.16
484 485 3.934684 GAGAGCAATCGCCGCTGC 61.935 66.667 3.19 3.19 40.63 5.25
485 486 2.202851 AGAGAGCAATCGCCGCTG 60.203 61.111 0.00 0.00 40.63 5.18
486 487 2.105930 GAGAGAGCAATCGCCGCT 59.894 61.111 0.00 0.00 44.10 5.52
487 488 2.202797 TGAGAGAGCAATCGCCGC 60.203 61.111 0.00 0.00 39.83 6.53
488 489 1.880340 GGTGAGAGAGCAATCGCCG 60.880 63.158 0.00 0.00 39.83 6.46
489 490 0.809241 CAGGTGAGAGAGCAATCGCC 60.809 60.000 0.00 0.00 44.78 5.54
490 491 1.427592 GCAGGTGAGAGAGCAATCGC 61.428 60.000 0.00 0.00 38.99 4.58
491 492 1.144565 CGCAGGTGAGAGAGCAATCG 61.145 60.000 0.00 0.00 0.00 3.34
492 493 2.675519 CGCAGGTGAGAGAGCAATC 58.324 57.895 0.00 0.00 0.00 2.67
493 494 4.928398 CGCAGGTGAGAGAGCAAT 57.072 55.556 0.00 0.00 0.00 3.56
508 509 2.868986 ATAACCCTAGCTCCGCCGC 61.869 63.158 0.00 0.00 0.00 6.53
509 510 1.006102 CATAACCCTAGCTCCGCCG 60.006 63.158 0.00 0.00 0.00 6.46
510 511 1.301795 GCATAACCCTAGCTCCGCC 60.302 63.158 0.00 0.00 0.00 6.13
511 512 0.880718 GTGCATAACCCTAGCTCCGC 60.881 60.000 0.00 0.00 0.00 5.54
512 513 0.249911 GGTGCATAACCCTAGCTCCG 60.250 60.000 0.00 0.00 44.02 4.63
513 514 3.708013 GGTGCATAACCCTAGCTCC 57.292 57.895 0.00 0.00 44.02 4.70
521 522 1.029408 TGCCATGACGGTGCATAACC 61.029 55.000 0.00 0.00 46.60 2.85
522 523 0.808125 TTGCCATGACGGTGCATAAC 59.192 50.000 0.00 0.00 36.97 1.89
523 524 1.404748 CATTGCCATGACGGTGCATAA 59.595 47.619 0.00 0.00 36.97 1.90
524 525 1.023502 CATTGCCATGACGGTGCATA 58.976 50.000 0.00 0.00 36.97 3.14
525 526 1.669049 CCATTGCCATGACGGTGCAT 61.669 55.000 0.00 0.00 36.97 3.96
526 527 2.341875 CCATTGCCATGACGGTGCA 61.342 57.895 0.00 0.00 36.97 4.57
527 528 2.491152 CCATTGCCATGACGGTGC 59.509 61.111 0.00 0.00 36.97 5.01
528 529 2.491152 GCCATTGCCATGACGGTG 59.509 61.111 0.00 0.00 36.97 4.94
547 548 4.862092 CTCGACATCGCCTGCGCT 62.862 66.667 9.73 0.00 39.60 5.92
550 551 4.854784 TCGCTCGACATCGCCTGC 62.855 66.667 0.00 0.61 39.60 4.85
551 552 2.202610 TTCGCTCGACATCGCCTG 60.203 61.111 0.00 0.00 39.60 4.85
552 553 2.202623 GTTCGCTCGACATCGCCT 60.203 61.111 0.00 0.00 39.60 5.52
553 554 3.607987 CGTTCGCTCGACATCGCC 61.608 66.667 0.00 0.00 39.60 5.54
554 555 2.576053 TCGTTCGCTCGACATCGC 60.576 61.111 0.00 0.00 39.60 4.58
560 561 4.434938 CCGTCGTCGTTCGCTCGA 62.435 66.667 0.71 7.76 38.19 4.04
565 566 1.911293 TTACTCCCCGTCGTCGTTCG 61.911 60.000 0.71 0.00 41.41 3.95
566 567 0.453390 ATTACTCCCCGTCGTCGTTC 59.547 55.000 0.71 0.00 35.01 3.95
567 568 0.453390 GATTACTCCCCGTCGTCGTT 59.547 55.000 0.71 0.00 35.01 3.85
568 569 0.677731 TGATTACTCCCCGTCGTCGT 60.678 55.000 0.71 0.00 35.01 4.34
569 570 0.029035 CTGATTACTCCCCGTCGTCG 59.971 60.000 0.00 0.00 0.00 5.12
570 571 1.386533 TCTGATTACTCCCCGTCGTC 58.613 55.000 0.00 0.00 0.00 4.20
571 572 1.681793 CATCTGATTACTCCCCGTCGT 59.318 52.381 0.00 0.00 0.00 4.34
572 573 1.000163 CCATCTGATTACTCCCCGTCG 60.000 57.143 0.00 0.00 0.00 5.12
573 574 2.317040 TCCATCTGATTACTCCCCGTC 58.683 52.381 0.00 0.00 0.00 4.79
574 575 2.471815 TCCATCTGATTACTCCCCGT 57.528 50.000 0.00 0.00 0.00 5.28
575 576 2.634940 ACATCCATCTGATTACTCCCCG 59.365 50.000 0.00 0.00 0.00 5.73
576 577 6.380079 AATACATCCATCTGATTACTCCCC 57.620 41.667 0.00 0.00 0.00 4.81
577 578 8.697507 AAAAATACATCCATCTGATTACTCCC 57.302 34.615 0.00 0.00 0.00 4.30
578 579 9.566432 AGAAAAATACATCCATCTGATTACTCC 57.434 33.333 0.00 0.00 0.00 3.85
585 586 8.742777 CCAGAAAAGAAAAATACATCCATCTGA 58.257 33.333 0.00 0.00 0.00 3.27
586 587 8.742777 TCCAGAAAAGAAAAATACATCCATCTG 58.257 33.333 0.00 0.00 0.00 2.90
587 588 8.743714 GTCCAGAAAAGAAAAATACATCCATCT 58.256 33.333 0.00 0.00 0.00 2.90
588 589 8.743714 AGTCCAGAAAAGAAAAATACATCCATC 58.256 33.333 0.00 0.00 0.00 3.51
589 590 8.526147 CAGTCCAGAAAAGAAAAATACATCCAT 58.474 33.333 0.00 0.00 0.00 3.41
590 591 7.039784 CCAGTCCAGAAAAGAAAAATACATCCA 60.040 37.037 0.00 0.00 0.00 3.41
591 592 7.315890 CCAGTCCAGAAAAGAAAAATACATCC 58.684 38.462 0.00 0.00 0.00 3.51
592 593 7.315890 CCCAGTCCAGAAAAGAAAAATACATC 58.684 38.462 0.00 0.00 0.00 3.06
593 594 6.295292 GCCCAGTCCAGAAAAGAAAAATACAT 60.295 38.462 0.00 0.00 0.00 2.29
594 595 5.010617 GCCCAGTCCAGAAAAGAAAAATACA 59.989 40.000 0.00 0.00 0.00 2.29
595 596 5.470368 GCCCAGTCCAGAAAAGAAAAATAC 58.530 41.667 0.00 0.00 0.00 1.89
596 597 4.526650 GGCCCAGTCCAGAAAAGAAAAATA 59.473 41.667 0.00 0.00 0.00 1.40
597 598 3.324846 GGCCCAGTCCAGAAAAGAAAAAT 59.675 43.478 0.00 0.00 0.00 1.82
598 599 2.698274 GGCCCAGTCCAGAAAAGAAAAA 59.302 45.455 0.00 0.00 0.00 1.94
599 600 2.316108 GGCCCAGTCCAGAAAAGAAAA 58.684 47.619 0.00 0.00 0.00 2.29
600 601 1.817740 CGGCCCAGTCCAGAAAAGAAA 60.818 52.381 0.00 0.00 0.00 2.52
601 602 0.250727 CGGCCCAGTCCAGAAAAGAA 60.251 55.000 0.00 0.00 0.00 2.52
602 603 1.374947 CGGCCCAGTCCAGAAAAGA 59.625 57.895 0.00 0.00 0.00 2.52
603 604 0.323629 TACGGCCCAGTCCAGAAAAG 59.676 55.000 0.00 0.00 0.00 2.27
604 605 0.988832 ATACGGCCCAGTCCAGAAAA 59.011 50.000 0.00 0.00 0.00 2.29
605 606 0.539986 GATACGGCCCAGTCCAGAAA 59.460 55.000 0.00 0.00 0.00 2.52
606 607 0.325296 AGATACGGCCCAGTCCAGAA 60.325 55.000 0.00 0.00 0.00 3.02
607 608 0.755698 GAGATACGGCCCAGTCCAGA 60.756 60.000 0.00 0.00 0.00 3.86
608 609 0.757188 AGAGATACGGCCCAGTCCAG 60.757 60.000 0.00 0.00 0.00 3.86
609 610 0.325296 AAGAGATACGGCCCAGTCCA 60.325 55.000 0.00 0.00 0.00 4.02
610 611 0.389757 GAAGAGATACGGCCCAGTCC 59.610 60.000 0.00 0.00 0.00 3.85
611 612 1.067821 CAGAAGAGATACGGCCCAGTC 59.932 57.143 0.00 0.00 0.00 3.51
612 613 1.115467 CAGAAGAGATACGGCCCAGT 58.885 55.000 0.00 0.00 0.00 4.00
613 614 0.390860 CCAGAAGAGATACGGCCCAG 59.609 60.000 0.00 0.00 0.00 4.45
614 615 1.048724 CCCAGAAGAGATACGGCCCA 61.049 60.000 0.00 0.00 0.00 5.36
615 616 1.749033 CCCAGAAGAGATACGGCCC 59.251 63.158 0.00 0.00 0.00 5.80
616 617 1.069935 GCCCAGAAGAGATACGGCC 59.930 63.158 0.00 0.00 0.00 6.13
617 618 0.249657 CAGCCCAGAAGAGATACGGC 60.250 60.000 0.00 0.00 36.62 5.68
618 619 0.390860 CCAGCCCAGAAGAGATACGG 59.609 60.000 0.00 0.00 0.00 4.02
619 620 0.249657 GCCAGCCCAGAAGAGATACG 60.250 60.000 0.00 0.00 0.00 3.06
620 621 0.833287 TGCCAGCCCAGAAGAGATAC 59.167 55.000 0.00 0.00 0.00 2.24
621 622 1.811778 ATGCCAGCCCAGAAGAGATA 58.188 50.000 0.00 0.00 0.00 1.98
622 623 0.924823 AATGCCAGCCCAGAAGAGAT 59.075 50.000 0.00 0.00 0.00 2.75
623 624 0.254178 GAATGCCAGCCCAGAAGAGA 59.746 55.000 0.00 0.00 0.00 3.10
624 625 0.750911 GGAATGCCAGCCCAGAAGAG 60.751 60.000 0.00 0.00 0.00 2.85
625 626 1.210204 AGGAATGCCAGCCCAGAAGA 61.210 55.000 0.00 0.00 36.29 2.87
626 627 0.750911 GAGGAATGCCAGCCCAGAAG 60.751 60.000 0.00 0.00 36.29 2.85
627 628 1.210204 AGAGGAATGCCAGCCCAGAA 61.210 55.000 0.00 0.00 36.29 3.02
628 629 1.617536 AGAGGAATGCCAGCCCAGA 60.618 57.895 0.00 0.00 36.29 3.86
629 630 1.453379 CAGAGGAATGCCAGCCCAG 60.453 63.158 0.00 0.00 36.29 4.45
630 631 2.679092 CAGAGGAATGCCAGCCCA 59.321 61.111 0.00 0.00 36.29 5.36
631 632 2.832201 GCAGAGGAATGCCAGCCC 60.832 66.667 0.00 0.00 40.43 5.19
637 638 4.332268 CAGAGTTAGAAAGCAGAGGAATGC 59.668 45.833 0.00 0.00 46.88 3.56
638 639 5.486526 ACAGAGTTAGAAAGCAGAGGAATG 58.513 41.667 0.00 0.00 0.00 2.67
639 640 5.753721 ACAGAGTTAGAAAGCAGAGGAAT 57.246 39.130 0.00 0.00 0.00 3.01
640 641 5.552870 AACAGAGTTAGAAAGCAGAGGAA 57.447 39.130 0.00 0.00 0.00 3.36
641 642 5.511545 GGAAACAGAGTTAGAAAGCAGAGGA 60.512 44.000 0.00 0.00 0.00 3.71
642 643 4.693095 GGAAACAGAGTTAGAAAGCAGAGG 59.307 45.833 0.00 0.00 0.00 3.69
643 644 4.693095 GGGAAACAGAGTTAGAAAGCAGAG 59.307 45.833 0.00 0.00 0.00 3.35
644 645 4.348168 AGGGAAACAGAGTTAGAAAGCAGA 59.652 41.667 0.00 0.00 0.00 4.26
645 646 4.453819 CAGGGAAACAGAGTTAGAAAGCAG 59.546 45.833 0.00 0.00 0.00 4.24
646 647 4.389374 CAGGGAAACAGAGTTAGAAAGCA 58.611 43.478 0.00 0.00 0.00 3.91
647 648 3.753797 CCAGGGAAACAGAGTTAGAAAGC 59.246 47.826 0.00 0.00 0.00 3.51
648 649 4.974399 ACCAGGGAAACAGAGTTAGAAAG 58.026 43.478 0.00 0.00 0.00 2.62
649 650 5.374071 GAACCAGGGAAACAGAGTTAGAAA 58.626 41.667 0.00 0.00 0.00 2.52
650 651 4.202430 GGAACCAGGGAAACAGAGTTAGAA 60.202 45.833 0.00 0.00 0.00 2.10
651 652 3.326880 GGAACCAGGGAAACAGAGTTAGA 59.673 47.826 0.00 0.00 0.00 2.10
652 653 3.676093 GGAACCAGGGAAACAGAGTTAG 58.324 50.000 0.00 0.00 0.00 2.34
653 654 3.782656 GGAACCAGGGAAACAGAGTTA 57.217 47.619 0.00 0.00 0.00 2.24
654 655 2.658807 GGAACCAGGGAAACAGAGTT 57.341 50.000 0.00 0.00 0.00 3.01
669 670 2.594592 ACGGCAGCAAGTGGGAAC 60.595 61.111 0.00 0.00 0.00 3.62
670 671 2.281484 GACGGCAGCAAGTGGGAA 60.281 61.111 0.00 0.00 0.00 3.97
671 672 4.680237 CGACGGCAGCAAGTGGGA 62.680 66.667 0.00 0.00 0.00 4.37
673 674 3.958147 ATCCGACGGCAGCAAGTGG 62.958 63.158 9.66 0.00 0.00 4.00
674 675 2.434884 ATCCGACGGCAGCAAGTG 60.435 61.111 9.66 0.00 0.00 3.16
675 676 2.434884 CATCCGACGGCAGCAAGT 60.435 61.111 9.66 0.00 0.00 3.16
676 677 3.197790 CCATCCGACGGCAGCAAG 61.198 66.667 9.66 0.00 0.00 4.01
683 684 3.664025 TTCAGCAGCCATCCGACGG 62.664 63.158 7.84 7.84 0.00 4.79
684 685 2.125552 TTCAGCAGCCATCCGACG 60.126 61.111 0.00 0.00 0.00 5.12
685 686 2.456119 CGTTCAGCAGCCATCCGAC 61.456 63.158 0.00 0.00 0.00 4.79
686 687 2.125552 CGTTCAGCAGCCATCCGA 60.126 61.111 0.00 0.00 0.00 4.55
687 688 3.197790 CCGTTCAGCAGCCATCCG 61.198 66.667 0.00 0.00 0.00 4.18
688 689 2.045926 ACCGTTCAGCAGCCATCC 60.046 61.111 0.00 0.00 0.00 3.51
689 690 0.745845 ATCACCGTTCAGCAGCCATC 60.746 55.000 0.00 0.00 0.00 3.51
690 691 1.028330 CATCACCGTTCAGCAGCCAT 61.028 55.000 0.00 0.00 0.00 4.40
691 692 1.672030 CATCACCGTTCAGCAGCCA 60.672 57.895 0.00 0.00 0.00 4.75
692 693 3.044059 GCATCACCGTTCAGCAGCC 62.044 63.158 0.00 0.00 0.00 4.85
693 694 2.482374 GCATCACCGTTCAGCAGC 59.518 61.111 0.00 0.00 0.00 5.25
694 695 1.642037 CTGGCATCACCGTTCAGCAG 61.642 60.000 0.00 0.00 43.94 4.24
695 696 1.672030 CTGGCATCACCGTTCAGCA 60.672 57.895 0.00 0.00 43.94 4.41
696 697 0.955428 TTCTGGCATCACCGTTCAGC 60.955 55.000 0.00 0.00 43.94 4.26
697 698 1.081892 CTTCTGGCATCACCGTTCAG 58.918 55.000 0.00 0.00 43.94 3.02
698 699 0.321564 CCTTCTGGCATCACCGTTCA 60.322 55.000 0.00 0.00 43.94 3.18
699 700 0.036388 TCCTTCTGGCATCACCGTTC 60.036 55.000 0.00 0.00 43.94 3.95
700 701 0.321653 GTCCTTCTGGCATCACCGTT 60.322 55.000 0.00 0.00 43.94 4.44
701 702 1.296715 GTCCTTCTGGCATCACCGT 59.703 57.895 0.00 0.00 43.94 4.83
702 703 1.811266 CGTCCTTCTGGCATCACCG 60.811 63.158 0.00 0.00 43.94 4.94
703 704 0.741221 GACGTCCTTCTGGCATCACC 60.741 60.000 3.51 0.00 39.84 4.02
704 705 0.741221 GGACGTCCTTCTGGCATCAC 60.741 60.000 27.64 0.00 0.00 3.06
705 706 1.596934 GGACGTCCTTCTGGCATCA 59.403 57.895 27.64 0.00 0.00 3.07
706 707 1.153349 GGGACGTCCTTCTGGCATC 60.153 63.158 32.52 10.15 35.95 3.91
707 708 1.613630 AGGGACGTCCTTCTGGCAT 60.614 57.895 32.52 7.32 45.47 4.40
708 709 2.203788 AGGGACGTCCTTCTGGCA 60.204 61.111 32.52 0.00 45.47 4.92
716 717 2.753043 TACTGCCGAGGGACGTCC 60.753 66.667 27.04 27.04 40.78 4.79
717 718 1.593296 AACTACTGCCGAGGGACGTC 61.593 60.000 7.13 7.13 40.78 4.34
718 719 1.183676 AAACTACTGCCGAGGGACGT 61.184 55.000 0.00 0.00 40.78 4.34
719 720 0.458025 GAAACTACTGCCGAGGGACG 60.458 60.000 0.00 0.00 42.18 4.79
720 721 0.606604 TGAAACTACTGCCGAGGGAC 59.393 55.000 0.00 0.00 0.00 4.46
721 722 1.001633 GTTGAAACTACTGCCGAGGGA 59.998 52.381 0.00 0.00 0.00 4.20
722 723 1.439679 GTTGAAACTACTGCCGAGGG 58.560 55.000 0.00 0.00 0.00 4.30
723 724 1.002087 AGGTTGAAACTACTGCCGAGG 59.998 52.381 0.00 0.00 0.00 4.63
724 725 2.457366 AGGTTGAAACTACTGCCGAG 57.543 50.000 0.00 0.00 0.00 4.63
725 726 2.352030 CGTAGGTTGAAACTACTGCCGA 60.352 50.000 17.38 0.00 38.87 5.54
726 727 1.990563 CGTAGGTTGAAACTACTGCCG 59.009 52.381 17.38 1.51 38.87 5.69
727 728 3.036075 ACGTAGGTTGAAACTACTGCC 57.964 47.619 17.38 0.00 38.87 4.85
728 729 5.464168 TCTAACGTAGGTTGAAACTACTGC 58.536 41.667 17.38 0.00 38.87 4.40
729 730 6.072286 TCCTCTAACGTAGGTTGAAACTACTG 60.072 42.308 17.38 13.05 38.87 2.74
730 731 6.006449 TCCTCTAACGTAGGTTGAAACTACT 58.994 40.000 17.38 3.40 38.87 2.57
731 732 6.259550 TCCTCTAACGTAGGTTGAAACTAC 57.740 41.667 10.30 10.30 36.90 2.73
732 733 6.888632 AGATCCTCTAACGTAGGTTGAAACTA 59.111 38.462 10.99 0.00 36.90 2.24
733 734 5.715753 AGATCCTCTAACGTAGGTTGAAACT 59.284 40.000 10.99 0.00 36.90 2.66
734 735 5.963594 AGATCCTCTAACGTAGGTTGAAAC 58.036 41.667 10.99 0.23 36.90 2.78
735 736 5.163683 CGAGATCCTCTAACGTAGGTTGAAA 60.164 44.000 10.99 0.00 36.90 2.69
736 737 4.334759 CGAGATCCTCTAACGTAGGTTGAA 59.665 45.833 10.99 0.00 36.90 2.69
737 738 3.875727 CGAGATCCTCTAACGTAGGTTGA 59.124 47.826 10.99 5.84 36.90 3.18
738 739 3.626670 ACGAGATCCTCTAACGTAGGTTG 59.373 47.826 10.99 1.92 36.90 3.77
739 740 3.883669 ACGAGATCCTCTAACGTAGGTT 58.116 45.455 6.03 6.03 40.20 3.50
740 741 3.557228 ACGAGATCCTCTAACGTAGGT 57.443 47.619 2.85 0.00 35.49 3.08
741 742 3.250521 GGAACGAGATCCTCTAACGTAGG 59.749 52.174 0.00 0.00 36.50 3.18
742 743 3.875727 TGGAACGAGATCCTCTAACGTAG 59.124 47.826 0.00 0.00 40.35 3.51
743 744 3.624861 GTGGAACGAGATCCTCTAACGTA 59.375 47.826 0.00 0.00 40.35 3.57
744 745 2.422832 GTGGAACGAGATCCTCTAACGT 59.577 50.000 0.00 0.00 40.35 3.99
745 746 2.683867 AGTGGAACGAGATCCTCTAACG 59.316 50.000 8.67 0.00 45.86 3.18
746 747 3.067040 GGAGTGGAACGAGATCCTCTAAC 59.933 52.174 9.87 5.04 45.86 2.34
747 748 3.288964 GGAGTGGAACGAGATCCTCTAA 58.711 50.000 9.87 0.00 45.86 2.10
748 749 2.745482 CGGAGTGGAACGAGATCCTCTA 60.745 54.545 9.87 0.00 45.86 2.43
749 750 1.770294 GGAGTGGAACGAGATCCTCT 58.230 55.000 9.73 9.73 45.86 3.69
750 751 0.382515 CGGAGTGGAACGAGATCCTC 59.617 60.000 0.00 0.00 45.86 3.71
751 752 0.034380 TCGGAGTGGAACGAGATCCT 60.034 55.000 0.00 0.00 45.86 3.24
752 753 0.100861 GTCGGAGTGGAACGAGATCC 59.899 60.000 0.00 0.00 45.86 3.36
753 754 0.248134 CGTCGGAGTGGAACGAGATC 60.248 60.000 0.00 0.00 45.86 2.75
754 755 1.801332 CGTCGGAGTGGAACGAGAT 59.199 57.895 0.00 0.00 45.86 2.75
755 756 2.974489 GCGTCGGAGTGGAACGAGA 61.974 63.158 0.00 0.00 45.86 4.04
756 757 2.504244 GCGTCGGAGTGGAACGAG 60.504 66.667 0.00 0.00 45.86 4.18
757 758 4.394078 CGCGTCGGAGTGGAACGA 62.394 66.667 0.00 0.00 45.86 3.85
1478 1667 1.913951 TTGGATGTCTCCGGCAGCAT 61.914 55.000 0.00 0.00 45.37 3.79
1708 1915 4.591321 TCCCAGCAAGAATCCAGTAAAT 57.409 40.909 0.00 0.00 0.00 1.40
2313 2618 7.869016 TCAGAACAGAAATACTACAGAAACG 57.131 36.000 0.00 0.00 0.00 3.60
2671 3078 6.009589 TGCAAGAGGGAAATTTACTTCATCA 58.990 36.000 14.43 6.35 0.00 3.07
2672 3079 6.515272 TGCAAGAGGGAAATTTACTTCATC 57.485 37.500 14.43 4.08 0.00 2.92
2673 3080 6.628844 GCATGCAAGAGGGAAATTTACTTCAT 60.629 38.462 14.21 0.00 0.00 2.57
2796 4455 4.812091 TCAAGCTACTTTTTCACGCAGTTA 59.188 37.500 0.00 0.00 41.61 2.24
2988 4651 7.548097 TGCTACTCACAATAAAAGACTCCTAG 58.452 38.462 0.00 0.00 0.00 3.02
3149 4852 9.255304 GAAATGACCAAGACTATTCAGATCTAC 57.745 37.037 0.00 0.00 0.00 2.59
3152 4855 7.768120 ACAGAAATGACCAAGACTATTCAGATC 59.232 37.037 0.00 0.00 0.00 2.75
3597 5393 6.227298 ACAGTTCAGATACCTCAACATAGG 57.773 41.667 0.00 0.00 42.82 2.57
3726 5527 2.119495 GATATGAGTGGACAGGTGGGT 58.881 52.381 0.00 0.00 0.00 4.51
3735 5536 3.197766 AGGAAAGCGTTGATATGAGTGGA 59.802 43.478 0.00 0.00 0.00 4.02
3948 5767 2.424793 AGGAACCAAGGGAGTACCAAA 58.575 47.619 0.00 0.00 43.89 3.28
3960 5787 4.425180 TTGCACTAACAGTAGGAACCAA 57.575 40.909 0.00 0.00 0.00 3.67
3989 5816 3.895041 AGAACATCTAAGGAGCTAGAGGC 59.105 47.826 0.00 0.00 33.89 4.70
4008 5836 4.099633 AGAATGGTCCTCAGTCATCAGAA 58.900 43.478 0.00 0.00 42.39 3.02
4055 5884 8.600625 CAAAAGAGGATGCATTTCATTATGTTG 58.399 33.333 0.00 0.00 35.05 3.33
4105 5934 4.864247 CCATGAAAAACTAATCAAAGGCGG 59.136 41.667 0.00 0.00 0.00 6.13
4158 5987 7.490657 TTGTCAGTTACCAACTACTCCATAT 57.509 36.000 0.00 0.00 40.46 1.78
4159 5988 6.921486 TTGTCAGTTACCAACTACTCCATA 57.079 37.500 0.00 0.00 40.46 2.74
4160 5989 5.818678 TTGTCAGTTACCAACTACTCCAT 57.181 39.130 0.00 0.00 40.46 3.41
4161 5990 5.818678 ATTGTCAGTTACCAACTACTCCA 57.181 39.130 0.00 0.00 40.46 3.86
4162 5991 6.070938 AGGTATTGTCAGTTACCAACTACTCC 60.071 42.308 13.61 0.00 40.46 3.85
4163 5992 6.812160 CAGGTATTGTCAGTTACCAACTACTC 59.188 42.308 13.61 0.00 40.46 2.59
4164 5993 6.495872 TCAGGTATTGTCAGTTACCAACTACT 59.504 38.462 13.61 0.00 40.46 2.57
4221 6050 9.463443 GAAATGTCAAATGGCATAGTTATAACC 57.537 33.333 12.05 0.00 39.84 2.85
4282 6111 8.140112 AGTCTCCTGACAATAAATAGTTCACT 57.860 34.615 0.00 0.00 45.20 3.41
4477 6306 2.960819 AGAACATAGACCGCTCACAAC 58.039 47.619 0.00 0.00 0.00 3.32
4486 6315 3.935828 GCCAAGAGTGAAGAACATAGACC 59.064 47.826 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.