Multiple sequence alignment - TraesCS6A01G061600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G061600 chr6A 100.000 2599 0 0 1 2599 33009717 33007119 0.000000e+00 4800
1 TraesCS6A01G061600 chr6A 86.851 867 65 25 882 1737 33949039 33949867 0.000000e+00 924
2 TraesCS6A01G061600 chr6A 90.000 460 22 8 1122 1557 33548105 33548564 8.070000e-160 573
3 TraesCS6A01G061600 chr6D 86.571 2100 133 75 508 2530 29384195 29386222 0.000000e+00 2178
4 TraesCS6A01G061600 chr6D 90.962 863 55 16 892 1737 28708305 28707449 0.000000e+00 1140
5 TraesCS6A01G061600 chr6D 90.393 458 18 15 1122 1557 28992664 28992211 1.730000e-161 579
6 TraesCS6A01G061600 chr6B 83.205 1691 177 62 508 2119 59588936 59587274 0.000000e+00 1450
7 TraesCS6A01G061600 chr6B 87.347 901 60 33 881 1737 61490260 61491150 0.000000e+00 983
8 TraesCS6A01G061600 chr6B 89.482 618 40 10 1509 2119 58319378 58318779 0.000000e+00 758
9 TraesCS6A01G061600 chr6B 90.295 577 47 8 877 1448 58319982 58319410 0.000000e+00 747
10 TraesCS6A01G061600 chr6B 83.089 751 79 28 892 1610 78151519 78150785 7.840000e-180 640
11 TraesCS6A01G061600 chr6B 90.810 457 21 13 1122 1557 60928425 60928881 2.230000e-165 592
12 TraesCS6A01G061600 chr6B 94.334 353 19 1 2247 2599 58318660 58318309 8.180000e-150 540
13 TraesCS6A01G061600 chr6B 93.785 354 17 3 2247 2599 59587155 59586806 6.370000e-146 527
14 TraesCS6A01G061600 chr6B 80.268 745 100 33 892 1610 77958117 77957394 3.830000e-143 518
15 TraesCS6A01G061600 chr6B 87.500 96 11 1 2 97 59797174 59797080 2.730000e-20 110
16 TraesCS6A01G061600 chrUn 84.018 657 72 24 914 1564 27335134 27335763 3.700000e-168 601
17 TraesCS6A01G061600 chr2D 86.213 544 53 18 877 1411 574436359 574435829 1.040000e-158 569


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G061600 chr6A 33007119 33009717 2598 True 4800.000000 4800 100.000000 1 2599 1 chr6A.!!$R1 2598
1 TraesCS6A01G061600 chr6A 33949039 33949867 828 False 924.000000 924 86.851000 882 1737 1 chr6A.!!$F2 855
2 TraesCS6A01G061600 chr6D 29384195 29386222 2027 False 2178.000000 2178 86.571000 508 2530 1 chr6D.!!$F1 2022
3 TraesCS6A01G061600 chr6D 28707449 28708305 856 True 1140.000000 1140 90.962000 892 1737 1 chr6D.!!$R1 845
4 TraesCS6A01G061600 chr6B 59586806 59588936 2130 True 988.500000 1450 88.495000 508 2599 2 chr6B.!!$R5 2091
5 TraesCS6A01G061600 chr6B 61490260 61491150 890 False 983.000000 983 87.347000 881 1737 1 chr6B.!!$F2 856
6 TraesCS6A01G061600 chr6B 58318309 58319982 1673 True 681.666667 758 91.370333 877 2599 3 chr6B.!!$R4 1722
7 TraesCS6A01G061600 chr6B 78150785 78151519 734 True 640.000000 640 83.089000 892 1610 1 chr6B.!!$R3 718
8 TraesCS6A01G061600 chr6B 77957394 77958117 723 True 518.000000 518 80.268000 892 1610 1 chr6B.!!$R2 718
9 TraesCS6A01G061600 chrUn 27335134 27335763 629 False 601.000000 601 84.018000 914 1564 1 chrUn.!!$F1 650
10 TraesCS6A01G061600 chr2D 574435829 574436359 530 True 569.000000 569 86.213000 877 1411 1 chr2D.!!$R1 534

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
149 150 0.036306 GGCCAGAGAAAAAGGGACGA 59.964 55.0 0.0 0.0 0.0 4.2 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1755 1919 0.322546 AATGACTTTGGACCTCCGGC 60.323 55.0 0.0 0.0 39.43 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 7.878477 AACTGCACACAAAAATATCAGAATG 57.122 32.000 0.00 0.00 37.54 2.67
37 38 2.957402 TCAGAATGACTTGGGCAGTT 57.043 45.000 0.00 0.00 42.56 3.16
38 39 3.228188 TCAGAATGACTTGGGCAGTTT 57.772 42.857 0.00 0.00 42.56 2.66
39 40 3.565307 TCAGAATGACTTGGGCAGTTTT 58.435 40.909 0.00 0.00 42.56 2.43
40 41 3.960102 TCAGAATGACTTGGGCAGTTTTT 59.040 39.130 0.00 0.00 42.56 1.94
58 59 3.569194 TTTTACAGCCACAGTCAAGGA 57.431 42.857 0.00 0.00 0.00 3.36
59 60 3.569194 TTTACAGCCACAGTCAAGGAA 57.431 42.857 0.00 0.00 0.00 3.36
60 61 3.788227 TTACAGCCACAGTCAAGGAAT 57.212 42.857 0.00 0.00 0.00 3.01
61 62 2.664402 ACAGCCACAGTCAAGGAATT 57.336 45.000 0.00 0.00 0.00 2.17
62 63 2.949447 ACAGCCACAGTCAAGGAATTT 58.051 42.857 0.00 0.00 0.00 1.82
63 64 2.887152 ACAGCCACAGTCAAGGAATTTC 59.113 45.455 0.00 0.00 0.00 2.17
64 65 2.886523 CAGCCACAGTCAAGGAATTTCA 59.113 45.455 0.00 0.00 0.00 2.69
65 66 2.887152 AGCCACAGTCAAGGAATTTCAC 59.113 45.455 0.00 0.00 0.00 3.18
66 67 2.887152 GCCACAGTCAAGGAATTTCACT 59.113 45.455 0.00 0.00 0.00 3.41
67 68 3.319122 GCCACAGTCAAGGAATTTCACTT 59.681 43.478 0.00 0.00 0.00 3.16
68 69 4.518970 GCCACAGTCAAGGAATTTCACTTA 59.481 41.667 0.00 0.00 0.00 2.24
69 70 5.183904 GCCACAGTCAAGGAATTTCACTTAT 59.816 40.000 0.00 0.00 0.00 1.73
70 71 6.374333 GCCACAGTCAAGGAATTTCACTTATA 59.626 38.462 0.00 0.00 0.00 0.98
71 72 7.414540 GCCACAGTCAAGGAATTTCACTTATAG 60.415 40.741 0.00 0.00 0.00 1.31
72 73 7.824289 CCACAGTCAAGGAATTTCACTTATAGA 59.176 37.037 0.00 0.00 0.00 1.98
73 74 9.388506 CACAGTCAAGGAATTTCACTTATAGAT 57.611 33.333 0.00 0.00 0.00 1.98
74 75 9.965902 ACAGTCAAGGAATTTCACTTATAGATT 57.034 29.630 0.00 0.00 0.00 2.40
110 111 9.855021 TTCCTTTAAACACTTTTTCTCTTCAAG 57.145 29.630 0.00 0.00 0.00 3.02
111 112 7.973944 TCCTTTAAACACTTTTTCTCTTCAAGC 59.026 33.333 0.00 0.00 0.00 4.01
112 113 7.759433 CCTTTAAACACTTTTTCTCTTCAAGCA 59.241 33.333 0.00 0.00 0.00 3.91
113 114 9.139174 CTTTAAACACTTTTTCTCTTCAAGCAA 57.861 29.630 0.00 0.00 0.00 3.91
114 115 6.951256 AAACACTTTTTCTCTTCAAGCAAC 57.049 33.333 0.00 0.00 0.00 4.17
115 116 4.662145 ACACTTTTTCTCTTCAAGCAACG 58.338 39.130 0.00 0.00 0.00 4.10
116 117 4.394920 ACACTTTTTCTCTTCAAGCAACGA 59.605 37.500 0.00 0.00 0.00 3.85
117 118 5.106317 ACACTTTTTCTCTTCAAGCAACGAA 60.106 36.000 0.00 0.00 0.00 3.85
118 119 5.453587 CACTTTTTCTCTTCAAGCAACGAAG 59.546 40.000 0.00 4.00 41.05 3.79
119 120 3.609103 TTTCTCTTCAAGCAACGAAGC 57.391 42.857 0.00 0.00 39.80 3.86
120 121 2.238942 TCTCTTCAAGCAACGAAGCA 57.761 45.000 6.62 0.00 39.80 3.91
121 122 2.560504 TCTCTTCAAGCAACGAAGCAA 58.439 42.857 6.62 0.00 39.80 3.91
122 123 2.942376 TCTCTTCAAGCAACGAAGCAAA 59.058 40.909 6.62 0.00 39.80 3.68
123 124 3.038710 CTCTTCAAGCAACGAAGCAAAC 58.961 45.455 6.62 0.00 39.80 2.93
124 125 2.119457 CTTCAAGCAACGAAGCAAACC 58.881 47.619 6.62 0.00 33.97 3.27
125 126 0.383949 TCAAGCAACGAAGCAAACCC 59.616 50.000 6.62 0.00 36.85 4.11
126 127 0.102120 CAAGCAACGAAGCAAACCCA 59.898 50.000 6.62 0.00 36.85 4.51
127 128 0.820871 AAGCAACGAAGCAAACCCAA 59.179 45.000 6.62 0.00 36.85 4.12
128 129 0.102300 AGCAACGAAGCAAACCCAAC 59.898 50.000 6.62 0.00 36.85 3.77
129 130 0.874175 GCAACGAAGCAAACCCAACC 60.874 55.000 0.00 0.00 0.00 3.77
130 131 0.593773 CAACGAAGCAAACCCAACCG 60.594 55.000 0.00 0.00 0.00 4.44
131 132 1.730451 AACGAAGCAAACCCAACCGG 61.730 55.000 0.00 0.00 37.81 5.28
132 133 2.338620 GAAGCAAACCCAACCGGC 59.661 61.111 0.00 0.00 33.26 6.13
133 134 3.220999 GAAGCAAACCCAACCGGCC 62.221 63.158 0.00 0.00 33.26 6.13
134 135 4.531426 AGCAAACCCAACCGGCCA 62.531 61.111 0.00 0.00 33.26 5.36
135 136 3.989787 GCAAACCCAACCGGCCAG 61.990 66.667 0.00 0.00 33.26 4.85
136 137 2.203422 CAAACCCAACCGGCCAGA 60.203 61.111 0.00 0.00 33.26 3.86
137 138 2.115266 AAACCCAACCGGCCAGAG 59.885 61.111 0.00 0.00 33.26 3.35
138 139 2.457323 AAACCCAACCGGCCAGAGA 61.457 57.895 0.00 0.00 33.26 3.10
139 140 2.002018 AAACCCAACCGGCCAGAGAA 62.002 55.000 0.00 0.00 33.26 2.87
140 141 2.002018 AACCCAACCGGCCAGAGAAA 62.002 55.000 0.00 0.00 33.26 2.52
141 142 1.228429 CCCAACCGGCCAGAGAAAA 60.228 57.895 0.00 0.00 0.00 2.29
142 143 0.825840 CCCAACCGGCCAGAGAAAAA 60.826 55.000 0.00 0.00 0.00 1.94
143 144 0.598065 CCAACCGGCCAGAGAAAAAG 59.402 55.000 0.00 0.00 0.00 2.27
144 145 0.598065 CAACCGGCCAGAGAAAAAGG 59.402 55.000 0.00 0.00 0.00 3.11
145 146 0.539669 AACCGGCCAGAGAAAAAGGG 60.540 55.000 0.00 0.00 0.00 3.95
146 147 1.378762 CCGGCCAGAGAAAAAGGGA 59.621 57.895 2.24 0.00 0.00 4.20
147 148 0.960861 CCGGCCAGAGAAAAAGGGAC 60.961 60.000 2.24 0.00 0.00 4.46
148 149 1.298859 CGGCCAGAGAAAAAGGGACG 61.299 60.000 2.24 0.00 46.69 4.79
149 150 0.036306 GGCCAGAGAAAAAGGGACGA 59.964 55.000 0.00 0.00 0.00 4.20
150 151 1.544759 GGCCAGAGAAAAAGGGACGAA 60.545 52.381 0.00 0.00 0.00 3.85
151 152 1.535896 GCCAGAGAAAAAGGGACGAAC 59.464 52.381 0.00 0.00 0.00 3.95
152 153 2.846193 CCAGAGAAAAAGGGACGAACA 58.154 47.619 0.00 0.00 0.00 3.18
153 154 2.548480 CCAGAGAAAAAGGGACGAACAC 59.452 50.000 0.00 0.00 0.00 3.32
154 155 3.202906 CAGAGAAAAAGGGACGAACACA 58.797 45.455 0.00 0.00 0.00 3.72
155 156 3.625764 CAGAGAAAAAGGGACGAACACAA 59.374 43.478 0.00 0.00 0.00 3.33
156 157 3.626217 AGAGAAAAAGGGACGAACACAAC 59.374 43.478 0.00 0.00 0.00 3.32
157 158 2.686405 AGAAAAAGGGACGAACACAACC 59.314 45.455 0.00 0.00 0.00 3.77
158 159 2.430248 AAAAGGGACGAACACAACCT 57.570 45.000 0.00 0.00 0.00 3.50
159 160 2.430248 AAAGGGACGAACACAACCTT 57.570 45.000 0.00 0.00 43.01 3.50
160 161 3.564053 AAAGGGACGAACACAACCTTA 57.436 42.857 0.00 0.00 40.46 2.69
161 162 3.782656 AAGGGACGAACACAACCTTAT 57.217 42.857 0.00 0.00 39.62 1.73
162 163 3.053831 AGGGACGAACACAACCTTATG 57.946 47.619 0.00 0.00 0.00 1.90
163 164 1.467342 GGGACGAACACAACCTTATGC 59.533 52.381 0.00 0.00 0.00 3.14
164 165 2.147958 GGACGAACACAACCTTATGCA 58.852 47.619 0.00 0.00 0.00 3.96
165 166 2.095919 GGACGAACACAACCTTATGCAC 60.096 50.000 0.00 0.00 0.00 4.57
166 167 2.546368 GACGAACACAACCTTATGCACA 59.454 45.455 0.00 0.00 0.00 4.57
167 168 2.946329 ACGAACACAACCTTATGCACAA 59.054 40.909 0.00 0.00 0.00 3.33
168 169 3.378742 ACGAACACAACCTTATGCACAAA 59.621 39.130 0.00 0.00 0.00 2.83
169 170 4.142359 ACGAACACAACCTTATGCACAAAA 60.142 37.500 0.00 0.00 0.00 2.44
170 171 4.206200 CGAACACAACCTTATGCACAAAAC 59.794 41.667 0.00 0.00 0.00 2.43
171 172 5.337578 AACACAACCTTATGCACAAAACT 57.662 34.783 0.00 0.00 0.00 2.66
172 173 4.932146 ACACAACCTTATGCACAAAACTC 58.068 39.130 0.00 0.00 0.00 3.01
173 174 4.400884 ACACAACCTTATGCACAAAACTCA 59.599 37.500 0.00 0.00 0.00 3.41
174 175 4.739716 CACAACCTTATGCACAAAACTCAC 59.260 41.667 0.00 0.00 0.00 3.51
175 176 4.202111 ACAACCTTATGCACAAAACTCACC 60.202 41.667 0.00 0.00 0.00 4.02
176 177 3.832527 ACCTTATGCACAAAACTCACCT 58.167 40.909 0.00 0.00 0.00 4.00
177 178 3.821033 ACCTTATGCACAAAACTCACCTC 59.179 43.478 0.00 0.00 0.00 3.85
178 179 3.191371 CCTTATGCACAAAACTCACCTCC 59.809 47.826 0.00 0.00 0.00 4.30
179 180 2.363306 ATGCACAAAACTCACCTCCA 57.637 45.000 0.00 0.00 0.00 3.86
180 181 2.136298 TGCACAAAACTCACCTCCAA 57.864 45.000 0.00 0.00 0.00 3.53
181 182 1.748493 TGCACAAAACTCACCTCCAAC 59.252 47.619 0.00 0.00 0.00 3.77
182 183 1.748493 GCACAAAACTCACCTCCAACA 59.252 47.619 0.00 0.00 0.00 3.33
183 184 2.223572 GCACAAAACTCACCTCCAACAG 60.224 50.000 0.00 0.00 0.00 3.16
184 185 3.278574 CACAAAACTCACCTCCAACAGA 58.721 45.455 0.00 0.00 0.00 3.41
185 186 3.065371 CACAAAACTCACCTCCAACAGAC 59.935 47.826 0.00 0.00 0.00 3.51
186 187 3.278574 CAAAACTCACCTCCAACAGACA 58.721 45.455 0.00 0.00 0.00 3.41
187 188 3.644966 AAACTCACCTCCAACAGACAA 57.355 42.857 0.00 0.00 0.00 3.18
188 189 2.918712 ACTCACCTCCAACAGACAAG 57.081 50.000 0.00 0.00 0.00 3.16
189 190 1.202698 ACTCACCTCCAACAGACAAGC 60.203 52.381 0.00 0.00 0.00 4.01
190 191 0.836606 TCACCTCCAACAGACAAGCA 59.163 50.000 0.00 0.00 0.00 3.91
191 192 1.211703 TCACCTCCAACAGACAAGCAA 59.788 47.619 0.00 0.00 0.00 3.91
192 193 2.158623 TCACCTCCAACAGACAAGCAAT 60.159 45.455 0.00 0.00 0.00 3.56
193 194 3.072330 TCACCTCCAACAGACAAGCAATA 59.928 43.478 0.00 0.00 0.00 1.90
194 195 3.820467 CACCTCCAACAGACAAGCAATAA 59.180 43.478 0.00 0.00 0.00 1.40
195 196 3.821033 ACCTCCAACAGACAAGCAATAAC 59.179 43.478 0.00 0.00 0.00 1.89
196 197 3.820467 CCTCCAACAGACAAGCAATAACA 59.180 43.478 0.00 0.00 0.00 2.41
197 198 4.320494 CCTCCAACAGACAAGCAATAACAC 60.320 45.833 0.00 0.00 0.00 3.32
198 199 4.203226 TCCAACAGACAAGCAATAACACA 58.797 39.130 0.00 0.00 0.00 3.72
199 200 4.642437 TCCAACAGACAAGCAATAACACAA 59.358 37.500 0.00 0.00 0.00 3.33
200 201 5.126222 TCCAACAGACAAGCAATAACACAAA 59.874 36.000 0.00 0.00 0.00 2.83
201 202 5.809562 CCAACAGACAAGCAATAACACAAAA 59.190 36.000 0.00 0.00 0.00 2.44
202 203 6.312426 CCAACAGACAAGCAATAACACAAAAA 59.688 34.615 0.00 0.00 0.00 1.94
203 204 7.011295 CCAACAGACAAGCAATAACACAAAAAT 59.989 33.333 0.00 0.00 0.00 1.82
204 205 7.467557 ACAGACAAGCAATAACACAAAAATG 57.532 32.000 0.00 0.00 0.00 2.32
205 206 7.264221 ACAGACAAGCAATAACACAAAAATGA 58.736 30.769 0.00 0.00 0.00 2.57
206 207 7.436080 ACAGACAAGCAATAACACAAAAATGAG 59.564 33.333 0.00 0.00 0.00 2.90
207 208 7.436080 CAGACAAGCAATAACACAAAAATGAGT 59.564 33.333 0.00 0.00 0.00 3.41
208 209 7.649306 AGACAAGCAATAACACAAAAATGAGTC 59.351 33.333 0.00 0.00 0.00 3.36
209 210 6.417635 ACAAGCAATAACACAAAAATGAGTCG 59.582 34.615 0.00 0.00 0.00 4.18
210 211 6.312399 AGCAATAACACAAAAATGAGTCGA 57.688 33.333 0.00 0.00 0.00 4.20
211 212 6.373779 AGCAATAACACAAAAATGAGTCGAG 58.626 36.000 0.00 0.00 0.00 4.04
212 213 6.017109 AGCAATAACACAAAAATGAGTCGAGT 60.017 34.615 0.00 0.00 0.00 4.18
213 214 6.303259 GCAATAACACAAAAATGAGTCGAGTC 59.697 38.462 13.54 13.54 0.00 3.36
214 215 7.351981 CAATAACACAAAAATGAGTCGAGTCA 58.648 34.615 24.45 24.45 0.00 3.41
215 216 4.795970 ACACAAAAATGAGTCGAGTCAC 57.204 40.909 24.71 0.00 0.00 3.67
216 217 4.188462 ACACAAAAATGAGTCGAGTCACA 58.812 39.130 24.71 4.50 0.00 3.58
217 218 4.634004 ACACAAAAATGAGTCGAGTCACAA 59.366 37.500 24.71 3.00 0.00 3.33
218 219 4.963953 CACAAAAATGAGTCGAGTCACAAC 59.036 41.667 24.71 0.00 0.00 3.32
219 220 4.203828 CAAAAATGAGTCGAGTCACAACG 58.796 43.478 24.71 9.22 0.00 4.10
220 221 1.419374 AATGAGTCGAGTCACAACGC 58.581 50.000 24.71 0.00 0.00 4.84
221 222 0.388649 ATGAGTCGAGTCACAACGCC 60.389 55.000 24.71 0.00 0.00 5.68
222 223 1.733399 GAGTCGAGTCACAACGCCC 60.733 63.158 15.47 0.00 0.00 6.13
223 224 2.737376 GTCGAGTCACAACGCCCC 60.737 66.667 0.00 0.00 0.00 5.80
224 225 4.351938 TCGAGTCACAACGCCCCG 62.352 66.667 0.00 0.00 0.00 5.73
225 226 4.351938 CGAGTCACAACGCCCCGA 62.352 66.667 0.00 0.00 0.00 5.14
226 227 2.029964 GAGTCACAACGCCCCGAA 59.970 61.111 0.00 0.00 0.00 4.30
227 228 2.027625 GAGTCACAACGCCCCGAAG 61.028 63.158 0.00 0.00 0.00 3.79
228 229 2.280592 GTCACAACGCCCCGAAGT 60.281 61.111 0.00 0.00 0.00 3.01
229 230 1.005867 GTCACAACGCCCCGAAGTA 60.006 57.895 0.00 0.00 0.00 2.24
230 231 0.600782 GTCACAACGCCCCGAAGTAA 60.601 55.000 0.00 0.00 0.00 2.24
231 232 0.106335 TCACAACGCCCCGAAGTAAA 59.894 50.000 0.00 0.00 0.00 2.01
232 233 0.236449 CACAACGCCCCGAAGTAAAC 59.764 55.000 0.00 0.00 0.00 2.01
233 234 0.886043 ACAACGCCCCGAAGTAAACC 60.886 55.000 0.00 0.00 0.00 3.27
234 235 0.885596 CAACGCCCCGAAGTAAACCA 60.886 55.000 0.00 0.00 0.00 3.67
235 236 0.886043 AACGCCCCGAAGTAAACCAC 60.886 55.000 0.00 0.00 0.00 4.16
236 237 1.301874 CGCCCCGAAGTAAACCACA 60.302 57.895 0.00 0.00 0.00 4.17
237 238 0.885596 CGCCCCGAAGTAAACCACAA 60.886 55.000 0.00 0.00 0.00 3.33
238 239 1.320507 GCCCCGAAGTAAACCACAAA 58.679 50.000 0.00 0.00 0.00 2.83
239 240 1.001048 GCCCCGAAGTAAACCACAAAC 60.001 52.381 0.00 0.00 0.00 2.93
240 241 2.578786 CCCCGAAGTAAACCACAAACT 58.421 47.619 0.00 0.00 0.00 2.66
241 242 2.292292 CCCCGAAGTAAACCACAAACTG 59.708 50.000 0.00 0.00 0.00 3.16
242 243 3.207778 CCCGAAGTAAACCACAAACTGA 58.792 45.455 0.00 0.00 0.00 3.41
243 244 3.250040 CCCGAAGTAAACCACAAACTGAG 59.750 47.826 0.00 0.00 0.00 3.35
244 245 3.875134 CCGAAGTAAACCACAAACTGAGT 59.125 43.478 0.00 0.00 0.00 3.41
245 246 4.260620 CCGAAGTAAACCACAAACTGAGTG 60.261 45.833 0.00 0.00 36.76 3.51
246 247 4.569162 CGAAGTAAACCACAAACTGAGTGA 59.431 41.667 0.00 0.00 39.30 3.41
247 248 5.276868 CGAAGTAAACCACAAACTGAGTGAG 60.277 44.000 0.00 0.00 39.30 3.51
248 249 4.451900 AGTAAACCACAAACTGAGTGAGG 58.548 43.478 0.00 0.00 39.30 3.86
249 250 3.366052 AAACCACAAACTGAGTGAGGT 57.634 42.857 0.00 0.00 41.10 3.85
250 251 3.366052 AACCACAAACTGAGTGAGGTT 57.634 42.857 9.84 9.84 42.77 3.50
251 252 3.366052 ACCACAAACTGAGTGAGGTTT 57.634 42.857 0.00 0.00 36.68 3.27
252 253 3.443681 AACCACAAACTGAGTGAGGTTTG 59.556 43.478 14.37 14.37 44.44 2.93
255 256 1.956477 CAAACTGAGTGAGGTTTGGGG 59.044 52.381 9.75 0.00 44.68 4.96
256 257 1.222567 AACTGAGTGAGGTTTGGGGT 58.777 50.000 0.00 0.00 0.00 4.95
257 258 0.474184 ACTGAGTGAGGTTTGGGGTG 59.526 55.000 0.00 0.00 0.00 4.61
258 259 0.890996 CTGAGTGAGGTTTGGGGTGC 60.891 60.000 0.00 0.00 0.00 5.01
259 260 1.150536 GAGTGAGGTTTGGGGTGCA 59.849 57.895 0.00 0.00 0.00 4.57
260 261 1.152756 AGTGAGGTTTGGGGTGCAC 60.153 57.895 8.80 8.80 0.00 4.57
261 262 1.454847 GTGAGGTTTGGGGTGCACA 60.455 57.895 20.43 0.00 0.00 4.57
262 263 1.152777 TGAGGTTTGGGGTGCACAG 60.153 57.895 20.43 0.00 0.00 3.66
263 264 1.903404 GAGGTTTGGGGTGCACAGG 60.903 63.158 20.43 0.00 0.00 4.00
264 265 3.615709 GGTTTGGGGTGCACAGGC 61.616 66.667 20.43 0.39 41.68 4.85
265 266 3.977244 GTTTGGGGTGCACAGGCG 61.977 66.667 20.43 0.00 45.35 5.52
266 267 4.196778 TTTGGGGTGCACAGGCGA 62.197 61.111 20.43 0.00 45.35 5.54
267 268 3.723097 TTTGGGGTGCACAGGCGAA 62.723 57.895 20.43 3.54 45.35 4.70
268 269 4.641645 TGGGGTGCACAGGCGAAG 62.642 66.667 20.43 0.00 45.35 3.79
282 283 3.767287 CGAAGCACACGTCTAGACA 57.233 52.632 22.37 0.00 0.00 3.41
283 284 2.046283 CGAAGCACACGTCTAGACAA 57.954 50.000 22.37 0.00 0.00 3.18
284 285 2.390938 CGAAGCACACGTCTAGACAAA 58.609 47.619 22.37 0.00 0.00 2.83
285 286 2.792674 CGAAGCACACGTCTAGACAAAA 59.207 45.455 22.37 0.00 0.00 2.44
286 287 3.244345 CGAAGCACACGTCTAGACAAAAA 59.756 43.478 22.37 0.00 0.00 1.94
287 288 4.084537 CGAAGCACACGTCTAGACAAAAAT 60.085 41.667 22.37 2.34 0.00 1.82
288 289 5.558273 CGAAGCACACGTCTAGACAAAAATT 60.558 40.000 22.37 9.36 0.00 1.82
289 290 6.346279 CGAAGCACACGTCTAGACAAAAATTA 60.346 38.462 22.37 0.00 0.00 1.40
290 291 6.224420 AGCACACGTCTAGACAAAAATTAC 57.776 37.500 22.37 4.20 0.00 1.89
291 292 5.756347 AGCACACGTCTAGACAAAAATTACA 59.244 36.000 22.37 0.00 0.00 2.41
292 293 5.844396 GCACACGTCTAGACAAAAATTACAC 59.156 40.000 22.37 0.00 0.00 2.90
293 294 6.062646 CACACGTCTAGACAAAAATTACACG 58.937 40.000 22.37 7.12 0.00 4.49
294 295 5.750067 ACACGTCTAGACAAAAATTACACGT 59.250 36.000 22.37 7.75 38.42 4.49
295 296 6.256321 ACACGTCTAGACAAAAATTACACGTT 59.744 34.615 22.37 0.42 35.89 3.99
296 297 6.568601 CACGTCTAGACAAAAATTACACGTTG 59.431 38.462 22.37 3.07 35.89 4.10
297 298 5.558888 CGTCTAGACAAAAATTACACGTTGC 59.441 40.000 22.37 0.00 0.00 4.17
298 299 5.558888 GTCTAGACAAAAATTACACGTTGCG 59.441 40.000 18.20 0.00 0.00 4.85
299 300 3.040099 AGACAAAAATTACACGTTGCGC 58.960 40.909 0.00 0.00 0.00 6.09
300 301 3.040099 GACAAAAATTACACGTTGCGCT 58.960 40.909 9.73 0.00 0.00 5.92
301 302 2.786578 ACAAAAATTACACGTTGCGCTG 59.213 40.909 9.73 0.00 0.00 5.18
302 303 2.044888 AAAATTACACGTTGCGCTGG 57.955 45.000 9.73 0.00 0.00 4.85
303 304 0.386731 AAATTACACGTTGCGCTGGC 60.387 50.000 9.73 0.00 40.52 4.85
304 305 1.234615 AATTACACGTTGCGCTGGCT 61.235 50.000 9.73 0.00 40.82 4.75
305 306 1.635663 ATTACACGTTGCGCTGGCTC 61.636 55.000 9.73 0.00 40.82 4.70
306 307 2.980213 TTACACGTTGCGCTGGCTCA 62.980 55.000 9.73 0.00 40.82 4.26
307 308 4.374702 CACGTTGCGCTGGCTCAC 62.375 66.667 9.73 0.00 40.82 3.51
308 309 4.908687 ACGTTGCGCTGGCTCACA 62.909 61.111 9.73 0.00 40.82 3.58
309 310 3.648982 CGTTGCGCTGGCTCACAA 61.649 61.111 9.73 0.00 40.82 3.33
310 311 2.050985 GTTGCGCTGGCTCACAAC 60.051 61.111 9.73 0.00 40.82 3.32
311 312 3.648982 TTGCGCTGGCTCACAACG 61.649 61.111 9.73 0.00 41.41 4.10
312 313 4.908687 TGCGCTGGCTCACAACGT 62.909 61.111 9.73 0.00 40.62 3.99
313 314 4.077188 GCGCTGGCTCACAACGTC 62.077 66.667 0.00 0.00 40.62 4.34
314 315 3.414700 CGCTGGCTCACAACGTCC 61.415 66.667 0.00 0.00 34.14 4.79
315 316 3.050275 GCTGGCTCACAACGTCCC 61.050 66.667 0.00 0.00 0.00 4.46
316 317 2.738521 CTGGCTCACAACGTCCCG 60.739 66.667 0.00 0.00 0.00 5.14
317 318 4.308458 TGGCTCACAACGTCCCGG 62.308 66.667 0.00 0.00 0.00 5.73
318 319 3.998672 GGCTCACAACGTCCCGGA 61.999 66.667 0.73 0.00 0.00 5.14
319 320 2.432628 GCTCACAACGTCCCGGAG 60.433 66.667 0.73 0.00 0.00 4.63
320 321 3.048602 CTCACAACGTCCCGGAGT 58.951 61.111 0.73 0.00 0.00 3.85
321 322 1.080705 CTCACAACGTCCCGGAGTC 60.081 63.158 0.73 0.00 0.00 3.36
322 323 1.802337 CTCACAACGTCCCGGAGTCA 61.802 60.000 0.73 0.00 0.00 3.41
323 324 1.068417 CACAACGTCCCGGAGTCAA 59.932 57.895 0.73 0.00 0.00 3.18
324 325 0.531090 CACAACGTCCCGGAGTCAAA 60.531 55.000 0.73 0.00 0.00 2.69
325 326 0.395312 ACAACGTCCCGGAGTCAAAT 59.605 50.000 0.73 0.00 0.00 2.32
326 327 1.619827 ACAACGTCCCGGAGTCAAATA 59.380 47.619 0.73 0.00 0.00 1.40
327 328 1.997606 CAACGTCCCGGAGTCAAATAC 59.002 52.381 0.73 0.00 0.00 1.89
328 329 0.171903 ACGTCCCGGAGTCAAATACG 59.828 55.000 0.73 0.48 35.17 3.06
329 330 0.452987 CGTCCCGGAGTCAAATACGA 59.547 55.000 0.73 0.00 0.00 3.43
330 331 1.533338 CGTCCCGGAGTCAAATACGAG 60.533 57.143 0.73 0.00 0.00 4.18
331 332 0.458669 TCCCGGAGTCAAATACGAGC 59.541 55.000 0.73 0.00 0.00 5.03
332 333 0.870307 CCCGGAGTCAAATACGAGCG 60.870 60.000 0.73 0.00 0.00 5.03
333 334 0.870307 CCGGAGTCAAATACGAGCGG 60.870 60.000 0.00 0.00 0.00 5.52
334 335 0.099968 CGGAGTCAAATACGAGCGGA 59.900 55.000 0.00 0.00 0.00 5.54
335 336 1.841450 GGAGTCAAATACGAGCGGAG 58.159 55.000 0.00 0.00 0.00 4.63
336 337 1.134560 GGAGTCAAATACGAGCGGAGT 59.865 52.381 0.00 0.00 0.00 3.85
337 338 2.186076 GAGTCAAATACGAGCGGAGTG 58.814 52.381 0.00 0.00 0.00 3.51
338 339 1.816835 AGTCAAATACGAGCGGAGTGA 59.183 47.619 0.00 0.00 0.00 3.41
339 340 1.918609 GTCAAATACGAGCGGAGTGAC 59.081 52.381 6.11 6.11 0.00 3.67
340 341 0.914551 CAAATACGAGCGGAGTGACG 59.085 55.000 0.00 0.00 0.00 4.35
341 342 0.179145 AAATACGAGCGGAGTGACGG 60.179 55.000 0.00 0.00 0.00 4.79
342 343 2.001361 AATACGAGCGGAGTGACGGG 62.001 60.000 0.00 0.00 0.00 5.28
343 344 3.907260 TACGAGCGGAGTGACGGGT 62.907 63.158 0.00 0.00 0.00 5.28
344 345 4.477975 CGAGCGGAGTGACGGGTC 62.478 72.222 0.00 0.00 40.98 4.46
345 346 3.063084 GAGCGGAGTGACGGGTCT 61.063 66.667 0.00 0.00 41.11 3.85
346 347 3.343788 GAGCGGAGTGACGGGTCTG 62.344 68.421 0.00 0.00 41.11 3.51
347 348 3.371063 GCGGAGTGACGGGTCTGA 61.371 66.667 0.00 0.00 0.00 3.27
348 349 2.711922 GCGGAGTGACGGGTCTGAT 61.712 63.158 0.00 0.00 0.00 2.90
349 350 1.139734 CGGAGTGACGGGTCTGATG 59.860 63.158 0.00 0.00 0.00 3.07
350 351 1.153549 GGAGTGACGGGTCTGATGC 60.154 63.158 0.00 0.00 0.00 3.91
351 352 1.591703 GAGTGACGGGTCTGATGCA 59.408 57.895 0.00 0.00 0.00 3.96
352 353 0.737715 GAGTGACGGGTCTGATGCAC 60.738 60.000 0.00 0.00 0.00 4.57
353 354 1.005037 GTGACGGGTCTGATGCACA 60.005 57.895 0.00 0.00 0.00 4.57
354 355 0.602638 GTGACGGGTCTGATGCACAA 60.603 55.000 0.00 0.00 0.00 3.33
355 356 0.107643 TGACGGGTCTGATGCACAAA 59.892 50.000 0.00 0.00 0.00 2.83
356 357 1.234821 GACGGGTCTGATGCACAAAA 58.765 50.000 0.00 0.00 0.00 2.44
357 358 1.197721 GACGGGTCTGATGCACAAAAG 59.802 52.381 0.00 0.00 0.00 2.27
358 359 1.202758 ACGGGTCTGATGCACAAAAGA 60.203 47.619 0.00 0.00 0.00 2.52
359 360 1.879380 CGGGTCTGATGCACAAAAGAA 59.121 47.619 0.00 0.00 0.00 2.52
360 361 2.095567 CGGGTCTGATGCACAAAAGAAG 60.096 50.000 0.00 0.00 0.00 2.85
361 362 2.352127 GGGTCTGATGCACAAAAGAAGC 60.352 50.000 0.00 0.00 0.00 3.86
362 363 2.294233 GGTCTGATGCACAAAAGAAGCA 59.706 45.455 0.00 0.00 43.14 3.91
363 364 3.303406 GTCTGATGCACAAAAGAAGCAC 58.697 45.455 0.00 0.00 41.60 4.40
364 365 3.004106 GTCTGATGCACAAAAGAAGCACT 59.996 43.478 0.00 0.00 41.60 4.40
365 366 4.214119 GTCTGATGCACAAAAGAAGCACTA 59.786 41.667 0.00 0.00 41.60 2.74
366 367 4.214119 TCTGATGCACAAAAGAAGCACTAC 59.786 41.667 0.00 0.00 41.60 2.73
367 368 3.253188 TGATGCACAAAAGAAGCACTACC 59.747 43.478 0.00 0.00 41.60 3.18
368 369 2.649190 TGCACAAAAGAAGCACTACCA 58.351 42.857 0.00 0.00 32.55 3.25
369 370 2.618241 TGCACAAAAGAAGCACTACCAG 59.382 45.455 0.00 0.00 32.55 4.00
370 371 2.605580 GCACAAAAGAAGCACTACCAGC 60.606 50.000 0.00 0.00 0.00 4.85
371 372 2.030805 CACAAAAGAAGCACTACCAGCC 60.031 50.000 0.00 0.00 0.00 4.85
372 373 1.197721 CAAAAGAAGCACTACCAGCCG 59.802 52.381 0.00 0.00 0.00 5.52
373 374 0.321653 AAAGAAGCACTACCAGCCGG 60.322 55.000 0.00 0.00 38.77 6.13
374 375 2.125106 GAAGCACTACCAGCCGGG 60.125 66.667 2.18 0.00 44.81 5.73
394 395 2.166270 GCAGGTGCACTAGTGAAGC 58.834 57.895 27.08 25.05 41.59 3.86
395 396 0.603707 GCAGGTGCACTAGTGAAGCA 60.604 55.000 30.10 17.54 39.06 3.91
396 397 1.882912 CAGGTGCACTAGTGAAGCAA 58.117 50.000 30.10 7.10 39.06 3.91
397 398 2.221169 CAGGTGCACTAGTGAAGCAAA 58.779 47.619 30.10 5.46 39.06 3.68
398 399 2.618241 CAGGTGCACTAGTGAAGCAAAA 59.382 45.455 30.10 3.86 39.06 2.44
399 400 2.618709 AGGTGCACTAGTGAAGCAAAAC 59.381 45.455 30.10 13.63 39.06 2.43
400 401 2.357637 GGTGCACTAGTGAAGCAAAACA 59.642 45.455 27.08 9.13 40.35 2.83
401 402 3.363178 GTGCACTAGTGAAGCAAAACAC 58.637 45.455 27.08 16.85 40.35 3.32
402 403 2.031560 TGCACTAGTGAAGCAAAACACG 59.968 45.455 27.08 0.00 41.22 4.49
403 404 2.286833 GCACTAGTGAAGCAAAACACGA 59.713 45.455 27.08 0.00 41.22 4.35
404 405 3.604772 GCACTAGTGAAGCAAAACACGAG 60.605 47.826 27.08 0.00 42.39 4.18
405 406 3.793559 ACTAGTGAAGCAAAACACGAGT 58.206 40.909 0.00 0.00 43.85 4.18
406 407 4.034048 CACTAGTGAAGCAAAACACGAGTT 59.966 41.667 18.45 0.00 45.36 3.01
407 408 3.405170 AGTGAAGCAAAACACGAGTTG 57.595 42.857 0.00 0.00 41.22 3.16
408 409 3.006940 AGTGAAGCAAAACACGAGTTGA 58.993 40.909 0.00 0.00 41.22 3.18
409 410 3.063997 AGTGAAGCAAAACACGAGTTGAG 59.936 43.478 0.00 0.00 41.22 3.02
410 411 3.006940 TGAAGCAAAACACGAGTTGAGT 58.993 40.909 0.00 0.00 38.17 3.41
411 412 3.181511 TGAAGCAAAACACGAGTTGAGTG 60.182 43.478 0.00 0.00 44.57 3.51
412 413 2.627945 AGCAAAACACGAGTTGAGTGA 58.372 42.857 0.00 0.00 41.83 3.41
413 414 2.609459 AGCAAAACACGAGTTGAGTGAG 59.391 45.455 0.00 0.00 41.83 3.51
414 415 2.607635 GCAAAACACGAGTTGAGTGAGA 59.392 45.455 0.00 0.00 41.83 3.27
415 416 3.248602 GCAAAACACGAGTTGAGTGAGAT 59.751 43.478 0.00 0.00 41.83 2.75
416 417 4.766007 CAAAACACGAGTTGAGTGAGATG 58.234 43.478 0.00 0.00 41.83 2.90
417 418 2.732412 ACACGAGTTGAGTGAGATGG 57.268 50.000 3.20 0.00 41.83 3.51
418 419 1.964223 ACACGAGTTGAGTGAGATGGT 59.036 47.619 3.20 0.00 41.83 3.55
419 420 2.288457 ACACGAGTTGAGTGAGATGGTG 60.288 50.000 3.20 0.00 41.83 4.17
420 421 1.273606 ACGAGTTGAGTGAGATGGTGG 59.726 52.381 0.00 0.00 0.00 4.61
421 422 1.404717 CGAGTTGAGTGAGATGGTGGG 60.405 57.143 0.00 0.00 0.00 4.61
422 423 1.902508 GAGTTGAGTGAGATGGTGGGA 59.097 52.381 0.00 0.00 0.00 4.37
423 424 2.503356 GAGTTGAGTGAGATGGTGGGAT 59.497 50.000 0.00 0.00 0.00 3.85
424 425 2.238144 AGTTGAGTGAGATGGTGGGATG 59.762 50.000 0.00 0.00 0.00 3.51
425 426 1.956869 TGAGTGAGATGGTGGGATGT 58.043 50.000 0.00 0.00 0.00 3.06
426 427 3.114643 TGAGTGAGATGGTGGGATGTA 57.885 47.619 0.00 0.00 0.00 2.29
427 428 2.766263 TGAGTGAGATGGTGGGATGTAC 59.234 50.000 0.00 0.00 0.00 2.90
428 429 2.766263 GAGTGAGATGGTGGGATGTACA 59.234 50.000 0.00 0.00 0.00 2.90
429 430 3.181329 AGTGAGATGGTGGGATGTACAA 58.819 45.455 0.00 0.00 0.00 2.41
430 431 3.198635 AGTGAGATGGTGGGATGTACAAG 59.801 47.826 0.00 0.00 0.00 3.16
431 432 3.055094 GTGAGATGGTGGGATGTACAAGT 60.055 47.826 0.00 0.00 0.00 3.16
432 433 3.055167 TGAGATGGTGGGATGTACAAGTG 60.055 47.826 0.00 0.00 0.00 3.16
433 434 3.181329 AGATGGTGGGATGTACAAGTGA 58.819 45.455 0.00 0.00 0.00 3.41
434 435 2.851263 TGGTGGGATGTACAAGTGAC 57.149 50.000 0.00 0.00 0.00 3.67
435 436 2.050918 TGGTGGGATGTACAAGTGACA 58.949 47.619 0.00 0.00 0.00 3.58
436 437 2.642311 TGGTGGGATGTACAAGTGACAT 59.358 45.455 0.00 0.00 40.25 3.06
442 443 3.448686 GATGTACAAGTGACATCCGAGG 58.551 50.000 0.00 0.00 44.95 4.63
443 444 1.067142 TGTACAAGTGACATCCGAGGC 60.067 52.381 0.00 0.00 0.00 4.70
444 445 1.067142 GTACAAGTGACATCCGAGGCA 60.067 52.381 0.00 0.00 0.00 4.75
445 446 0.320771 ACAAGTGACATCCGAGGCAC 60.321 55.000 0.86 0.86 0.00 5.01
446 447 0.320683 CAAGTGACATCCGAGGCACA 60.321 55.000 10.37 0.00 33.85 4.57
447 448 0.320771 AAGTGACATCCGAGGCACAC 60.321 55.000 10.37 6.62 33.85 3.82
448 449 1.005037 GTGACATCCGAGGCACACA 60.005 57.895 3.97 0.00 0.00 3.72
449 450 0.602638 GTGACATCCGAGGCACACAA 60.603 55.000 3.97 0.00 0.00 3.33
450 451 0.320683 TGACATCCGAGGCACACAAG 60.321 55.000 0.00 0.00 0.00 3.16
451 452 0.320771 GACATCCGAGGCACACAAGT 60.321 55.000 0.00 0.00 0.00 3.16
453 454 1.003355 ATCCGAGGCACACAAGTGG 60.003 57.895 5.08 0.00 45.98 4.00
454 455 1.480212 ATCCGAGGCACACAAGTGGA 61.480 55.000 5.08 0.00 45.98 4.02
455 456 1.227823 CCGAGGCACACAAGTGGAA 60.228 57.895 5.08 0.00 45.98 3.53
456 457 1.230635 CCGAGGCACACAAGTGGAAG 61.231 60.000 5.08 0.00 45.98 3.46
457 458 1.845809 CGAGGCACACAAGTGGAAGC 61.846 60.000 5.08 5.71 45.98 3.86
458 459 0.819259 GAGGCACACAAGTGGAAGCA 60.819 55.000 5.08 0.00 45.98 3.91
459 460 0.820891 AGGCACACAAGTGGAAGCAG 60.821 55.000 5.08 0.00 45.98 4.24
460 461 0.819259 GGCACACAAGTGGAAGCAGA 60.819 55.000 5.08 0.00 45.98 4.26
461 462 0.308993 GCACACAAGTGGAAGCAGAC 59.691 55.000 5.08 0.00 45.98 3.51
462 463 1.667236 CACACAAGTGGAAGCAGACA 58.333 50.000 5.08 0.00 42.13 3.41
463 464 1.331756 CACACAAGTGGAAGCAGACAC 59.668 52.381 5.08 0.00 42.13 3.67
464 465 0.583438 CACAAGTGGAAGCAGACACG 59.417 55.000 0.00 0.00 42.25 4.49
465 466 0.464036 ACAAGTGGAAGCAGACACGA 59.536 50.000 0.00 0.00 42.25 4.35
466 467 1.143305 CAAGTGGAAGCAGACACGAG 58.857 55.000 0.00 0.00 42.25 4.18
467 468 1.040646 AAGTGGAAGCAGACACGAGA 58.959 50.000 0.00 0.00 42.25 4.04
468 469 1.261480 AGTGGAAGCAGACACGAGAT 58.739 50.000 0.00 0.00 42.25 2.75
469 470 1.067283 AGTGGAAGCAGACACGAGATG 60.067 52.381 0.00 0.00 42.25 2.90
482 483 3.509388 GAGATGTCGAACACCCGTT 57.491 52.632 0.00 0.00 38.33 4.44
483 484 1.347320 GAGATGTCGAACACCCGTTC 58.653 55.000 0.00 0.00 46.77 3.95
490 491 3.390003 GAACACCCGTTCTGAACCA 57.610 52.632 14.48 0.00 46.72 3.67
491 492 1.670791 GAACACCCGTTCTGAACCAA 58.329 50.000 14.48 0.00 46.72 3.67
492 493 1.332686 GAACACCCGTTCTGAACCAAC 59.667 52.381 14.48 0.00 46.72 3.77
493 494 0.812412 ACACCCGTTCTGAACCAACG 60.812 55.000 14.48 3.91 45.03 4.10
494 495 1.890510 ACCCGTTCTGAACCAACGC 60.891 57.895 14.48 0.00 44.27 4.84
495 496 1.890041 CCCGTTCTGAACCAACGCA 60.890 57.895 14.48 0.00 44.27 5.24
496 497 1.569493 CCGTTCTGAACCAACGCAG 59.431 57.895 14.48 0.00 44.27 5.18
497 498 1.569493 CGTTCTGAACCAACGCAGG 59.431 57.895 14.48 0.00 40.14 4.85
498 499 0.878523 CGTTCTGAACCAACGCAGGA 60.879 55.000 14.48 0.00 40.14 3.86
499 500 0.586802 GTTCTGAACCAACGCAGGAC 59.413 55.000 9.38 0.00 33.82 3.85
500 501 0.179234 TTCTGAACCAACGCAGGACA 59.821 50.000 0.10 0.56 33.05 4.02
501 502 0.531974 TCTGAACCAACGCAGGACAC 60.532 55.000 0.10 0.00 33.05 3.67
502 503 1.831389 CTGAACCAACGCAGGACACG 61.831 60.000 0.10 0.00 0.00 4.49
503 504 3.236618 GAACCAACGCAGGACACGC 62.237 63.158 0.10 0.00 0.00 5.34
504 505 4.539083 ACCAACGCAGGACACGCA 62.539 61.111 0.10 0.00 0.00 5.24
505 506 4.012895 CCAACGCAGGACACGCAC 62.013 66.667 0.00 0.00 0.00 5.34
506 507 4.354212 CAACGCAGGACACGCACG 62.354 66.667 0.00 0.00 0.00 5.34
525 526 2.514824 GATGCCCCAAGGAGACGC 60.515 66.667 0.00 0.00 33.47 5.19
526 527 3.011517 ATGCCCCAAGGAGACGCT 61.012 61.111 0.00 0.00 33.47 5.07
584 585 8.087750 TCAATTGTGTCAGTTTCAAAAGAAGTT 58.912 29.630 5.13 0.00 0.00 2.66
592 593 9.010366 GTCAGTTTCAAAAGAAGTTGATGTTAC 57.990 33.333 0.00 0.00 37.36 2.50
593 594 8.188139 TCAGTTTCAAAAGAAGTTGATGTTACC 58.812 33.333 0.00 0.00 37.36 2.85
640 641 2.910688 TCCTCACGAATGAATAGCCC 57.089 50.000 0.00 0.00 33.30 5.19
648 649 5.469760 TCACGAATGAATAGCCCAATATGTG 59.530 40.000 0.00 0.00 0.00 3.21
704 705 5.619220 AGATGATCCAAATAGAAGTGGAGC 58.381 41.667 1.06 1.06 46.87 4.70
721 722 0.952984 AGCGCAAAAGCTCACTCCTC 60.953 55.000 11.47 0.00 45.67 3.71
755 756 5.750352 AAAATGACAAGGCAAGATCCAAT 57.250 34.783 0.00 0.00 0.00 3.16
762 766 8.359875 TGACAAGGCAAGATCCAATAAATAAA 57.640 30.769 0.00 0.00 0.00 1.40
768 772 5.907391 GCAAGATCCAATAAATAAACGGACG 59.093 40.000 0.00 0.00 0.00 4.79
780 784 0.517316 AACGGACGCAATTTCAGAGC 59.483 50.000 0.00 0.00 0.00 4.09
800 804 5.126707 AGAGCCATGTCAAAATCCATCTTTC 59.873 40.000 0.00 0.00 0.00 2.62
803 807 5.579511 GCCATGTCAAAATCCATCTTTCTTG 59.420 40.000 0.00 0.00 0.00 3.02
819 824 6.908825 TCTTTCTTGAATGGGTAATTTGTCG 58.091 36.000 0.00 0.00 0.00 4.35
836 841 4.746535 TGTCGGGTAGCTGAATAAATGA 57.253 40.909 4.71 0.00 0.00 2.57
840 845 3.247648 CGGGTAGCTGAATAAATGAACGG 59.752 47.826 0.00 0.00 0.00 4.44
857 862 2.726633 ACGGATTTGTTGCAAGAAACG 58.273 42.857 22.45 22.35 32.47 3.60
867 872 1.314730 GCAAGAAACGGAGGACCAAA 58.685 50.000 0.00 0.00 35.59 3.28
868 873 1.886542 GCAAGAAACGGAGGACCAAAT 59.113 47.619 0.00 0.00 35.59 2.32
869 874 2.351738 GCAAGAAACGGAGGACCAAATG 60.352 50.000 0.00 0.00 35.59 2.32
870 875 2.200373 AGAAACGGAGGACCAAATGG 57.800 50.000 0.00 0.00 42.17 3.16
1408 1470 4.069232 CTCAAGCGACAGGGGCGA 62.069 66.667 0.00 0.00 35.00 5.54
1461 1524 1.595466 GCTGCTCCAATCTCCATCTG 58.405 55.000 0.00 0.00 0.00 2.90
1462 1525 1.595466 CTGCTCCAATCTCCATCTGC 58.405 55.000 0.00 0.00 0.00 4.26
1464 1527 2.367894 CTGCTCCAATCTCCATCTGCTA 59.632 50.000 0.00 0.00 0.00 3.49
1465 1528 2.977580 TGCTCCAATCTCCATCTGCTAT 59.022 45.455 0.00 0.00 0.00 2.97
1466 1529 3.244457 TGCTCCAATCTCCATCTGCTATG 60.244 47.826 0.00 0.00 0.00 2.23
1502 1593 0.027455 TTTGTTTCTGAGTGCGTGCG 59.973 50.000 0.00 0.00 0.00 5.34
1503 1594 1.087202 TTGTTTCTGAGTGCGTGCGT 61.087 50.000 0.00 0.00 0.00 5.24
1504 1595 1.083401 GTTTCTGAGTGCGTGCGTG 60.083 57.895 0.00 0.00 0.00 5.34
1505 1596 2.881266 TTTCTGAGTGCGTGCGTGC 61.881 57.895 0.00 0.00 0.00 5.34
1522 1613 2.480555 CGTTGCTGTTCCATCGGC 59.519 61.111 0.00 0.00 39.84 5.54
1539 1638 1.480954 CGGCCTGTGTAGTTAGTGGAT 59.519 52.381 0.00 0.00 0.00 3.41
1564 1680 4.153117 GCGATGGATCTGAATGTAATGGAC 59.847 45.833 0.00 0.00 0.00 4.02
1658 1815 3.411446 TGGCTTGTTCCTGTACATTCTG 58.589 45.455 0.00 0.00 0.00 3.02
1664 1821 6.803807 GCTTGTTCCTGTACATTCTGAAATTC 59.196 38.462 0.00 0.00 0.00 2.17
1706 1863 6.427150 TGTTGACTCTTTCAGTAATTTTCGC 58.573 36.000 0.00 0.00 34.41 4.70
1755 1919 1.101049 AAATTCATACCAGGCGGCGG 61.101 55.000 9.78 16.10 34.57 6.13
1756 1920 4.849310 TTCATACCAGGCGGCGGC 62.849 66.667 27.24 27.24 34.57 6.53
1889 2067 0.617413 CAGGAGAAGGTCTGTGCCAT 59.383 55.000 0.00 0.00 0.00 4.40
1930 2108 2.982470 GTTGCAATCTGCTGCTGTTTAC 59.018 45.455 0.59 0.00 45.31 2.01
1937 2115 1.470098 CTGCTGCTGTTTACATCCCAC 59.530 52.381 0.00 0.00 0.00 4.61
2016 2226 4.522114 TCATAATGAAAATGGAGCCGTGA 58.478 39.130 0.00 0.00 0.00 4.35
2087 2297 9.784531 TCTCTGAATTTAAGTGTCTTTTCATCT 57.215 29.630 0.00 0.00 0.00 2.90
2159 2370 8.462016 GTTCAGTCAAATGGTTATAGAATTGCT 58.538 33.333 0.00 0.00 0.00 3.91
2179 2390 3.492313 CTCGTTGCTCAACATAAAAGCC 58.508 45.455 12.54 0.00 41.20 4.35
2190 2401 1.065551 CATAAAAGCCGGCTAACCTGC 59.934 52.381 33.07 0.00 45.96 4.85
2195 2406 2.574929 CCGGCTAACCTGCACGTA 59.425 61.111 0.00 0.00 34.04 3.57
2196 2407 1.808390 CCGGCTAACCTGCACGTAC 60.808 63.158 0.00 0.00 34.04 3.67
2197 2408 1.214589 CGGCTAACCTGCACGTACT 59.785 57.895 0.00 0.00 34.04 2.73
2202 2413 3.554731 GGCTAACCTGCACGTACTAAATC 59.445 47.826 0.00 0.00 34.04 2.17
2211 2422 3.858238 GCACGTACTAAATCTGTCACCTC 59.142 47.826 0.00 0.00 0.00 3.85
2240 2451 2.161609 GCTACCGGGACATGTTTTTCTG 59.838 50.000 6.32 0.00 0.00 3.02
2243 2484 1.269448 CCGGGACATGTTTTTCTGTGG 59.731 52.381 0.00 0.00 0.00 4.17
2245 2486 1.618343 GGGACATGTTTTTCTGTGGGG 59.382 52.381 0.00 0.00 0.00 4.96
2253 2494 2.897326 GTTTTTCTGTGGGGTGGCTAAT 59.103 45.455 0.00 0.00 0.00 1.73
2318 2559 5.713861 CACTTTCTCATGGATTTTCCTCCTT 59.286 40.000 0.00 0.00 37.46 3.36
2376 2617 4.084900 GCTTTTCACACTGCTATTTTGTGC 60.085 41.667 0.00 0.00 40.43 4.57
2482 2726 7.383300 GCTGCTAAATATCCCATGTCAAAAATC 59.617 37.037 0.00 0.00 0.00 2.17
2500 2745 7.497249 TCAAAAATCAAAACATCGGGAACATTT 59.503 29.630 0.00 0.00 0.00 2.32
2555 2800 6.751157 TGATTCATCAAGAACACAAGCAATT 58.249 32.000 0.00 0.00 39.49 2.32
2556 2801 7.211573 TGATTCATCAAGAACACAAGCAATTT 58.788 30.769 0.00 0.00 39.49 1.82
2572 2817 3.612479 GCAATTTGACCGTCTGAATGCTT 60.612 43.478 0.00 0.00 0.00 3.91
2577 2822 1.461127 GACCGTCTGAATGCTTGTGTC 59.539 52.381 0.00 0.00 0.00 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.809331 TCATTCTGATATTTTTGTGTGCAGTTC 59.191 33.333 0.00 0.00 0.00 3.01
3 4 7.310664 AGTCATTCTGATATTTTTGTGTGCAG 58.689 34.615 0.00 0.00 0.00 4.41
5 6 7.062605 CCAAGTCATTCTGATATTTTTGTGTGC 59.937 37.037 0.00 0.00 0.00 4.57
6 7 7.543172 CCCAAGTCATTCTGATATTTTTGTGTG 59.457 37.037 0.00 0.00 0.00 3.82
7 8 7.605449 CCCAAGTCATTCTGATATTTTTGTGT 58.395 34.615 0.00 0.00 0.00 3.72
8 9 6.532657 GCCCAAGTCATTCTGATATTTTTGTG 59.467 38.462 0.00 0.00 0.00 3.33
9 10 6.211184 TGCCCAAGTCATTCTGATATTTTTGT 59.789 34.615 0.00 0.00 0.00 2.83
10 11 6.632909 TGCCCAAGTCATTCTGATATTTTTG 58.367 36.000 0.00 0.00 0.00 2.44
11 12 6.438425 ACTGCCCAAGTCATTCTGATATTTTT 59.562 34.615 0.00 0.00 31.64 1.94
12 13 5.954150 ACTGCCCAAGTCATTCTGATATTTT 59.046 36.000 0.00 0.00 31.64 1.82
13 14 5.513233 ACTGCCCAAGTCATTCTGATATTT 58.487 37.500 0.00 0.00 31.64 1.40
14 15 5.121380 ACTGCCCAAGTCATTCTGATATT 57.879 39.130 0.00 0.00 31.64 1.28
15 16 4.785346 ACTGCCCAAGTCATTCTGATAT 57.215 40.909 0.00 0.00 31.64 1.63
16 17 4.574674 AACTGCCCAAGTCATTCTGATA 57.425 40.909 0.00 0.00 38.56 2.15
17 18 3.446442 AACTGCCCAAGTCATTCTGAT 57.554 42.857 0.00 0.00 38.56 2.90
18 19 2.957402 AACTGCCCAAGTCATTCTGA 57.043 45.000 0.00 0.00 38.56 3.27
19 20 4.326504 AAAAACTGCCCAAGTCATTCTG 57.673 40.909 0.00 0.00 38.56 3.02
37 38 3.892284 TCCTTGACTGTGGCTGTAAAAA 58.108 40.909 0.00 0.00 0.00 1.94
38 39 3.569194 TCCTTGACTGTGGCTGTAAAA 57.431 42.857 0.00 0.00 0.00 1.52
39 40 3.569194 TTCCTTGACTGTGGCTGTAAA 57.431 42.857 0.00 0.00 0.00 2.01
40 41 3.788227 ATTCCTTGACTGTGGCTGTAA 57.212 42.857 0.00 0.00 0.00 2.41
41 42 3.788227 AATTCCTTGACTGTGGCTGTA 57.212 42.857 0.00 0.00 0.00 2.74
42 43 2.664402 AATTCCTTGACTGTGGCTGT 57.336 45.000 0.00 0.00 0.00 4.40
43 44 2.886523 TGAAATTCCTTGACTGTGGCTG 59.113 45.455 0.00 0.00 0.00 4.85
44 45 2.887152 GTGAAATTCCTTGACTGTGGCT 59.113 45.455 0.00 0.00 0.00 4.75
45 46 2.887152 AGTGAAATTCCTTGACTGTGGC 59.113 45.455 0.00 0.00 0.00 5.01
46 47 6.824305 ATAAGTGAAATTCCTTGACTGTGG 57.176 37.500 6.88 0.00 0.00 4.17
47 48 8.777865 TCTATAAGTGAAATTCCTTGACTGTG 57.222 34.615 6.88 0.00 0.00 3.66
48 49 9.965902 AATCTATAAGTGAAATTCCTTGACTGT 57.034 29.630 6.88 0.00 0.00 3.55
84 85 9.855021 CTTGAAGAGAAAAAGTGTTTAAAGGAA 57.145 29.630 0.00 0.00 0.00 3.36
85 86 7.973944 GCTTGAAGAGAAAAAGTGTTTAAAGGA 59.026 33.333 0.00 0.00 0.00 3.36
86 87 7.759433 TGCTTGAAGAGAAAAAGTGTTTAAAGG 59.241 33.333 0.00 0.00 0.00 3.11
87 88 8.687824 TGCTTGAAGAGAAAAAGTGTTTAAAG 57.312 30.769 0.00 0.00 0.00 1.85
88 89 8.921670 GTTGCTTGAAGAGAAAAAGTGTTTAAA 58.078 29.630 0.00 0.00 0.00 1.52
89 90 7.272515 CGTTGCTTGAAGAGAAAAAGTGTTTAA 59.727 33.333 0.00 0.00 0.00 1.52
90 91 6.745450 CGTTGCTTGAAGAGAAAAAGTGTTTA 59.255 34.615 0.00 0.00 0.00 2.01
91 92 5.572896 CGTTGCTTGAAGAGAAAAAGTGTTT 59.427 36.000 0.00 0.00 0.00 2.83
92 93 5.095490 CGTTGCTTGAAGAGAAAAAGTGTT 58.905 37.500 0.00 0.00 0.00 3.32
93 94 4.394920 TCGTTGCTTGAAGAGAAAAAGTGT 59.605 37.500 0.00 0.00 0.00 3.55
94 95 4.908736 TCGTTGCTTGAAGAGAAAAAGTG 58.091 39.130 0.00 0.00 0.00 3.16
95 96 5.560966 TTCGTTGCTTGAAGAGAAAAAGT 57.439 34.783 0.00 0.00 0.00 2.66
96 97 4.439123 GCTTCGTTGCTTGAAGAGAAAAAG 59.561 41.667 14.57 0.00 44.42 2.27
97 98 4.142491 TGCTTCGTTGCTTGAAGAGAAAAA 60.142 37.500 14.57 0.00 44.42 1.94
98 99 3.376859 TGCTTCGTTGCTTGAAGAGAAAA 59.623 39.130 14.57 0.00 44.42 2.29
99 100 2.942376 TGCTTCGTTGCTTGAAGAGAAA 59.058 40.909 14.57 0.00 44.42 2.52
100 101 2.560504 TGCTTCGTTGCTTGAAGAGAA 58.439 42.857 14.57 0.00 44.42 2.87
101 102 2.238942 TGCTTCGTTGCTTGAAGAGA 57.761 45.000 14.57 1.19 44.42 3.10
102 103 3.038710 GTTTGCTTCGTTGCTTGAAGAG 58.961 45.455 14.57 0.00 44.42 2.85
103 104 2.223479 GGTTTGCTTCGTTGCTTGAAGA 60.223 45.455 14.57 1.35 44.42 2.87
104 105 2.119457 GGTTTGCTTCGTTGCTTGAAG 58.881 47.619 8.27 8.27 44.46 3.02
105 106 1.202359 GGGTTTGCTTCGTTGCTTGAA 60.202 47.619 4.36 0.00 0.00 2.69
106 107 0.383949 GGGTTTGCTTCGTTGCTTGA 59.616 50.000 4.36 0.00 0.00 3.02
107 108 0.102120 TGGGTTTGCTTCGTTGCTTG 59.898 50.000 4.36 0.00 0.00 4.01
108 109 0.820871 TTGGGTTTGCTTCGTTGCTT 59.179 45.000 4.36 0.00 0.00 3.91
109 110 0.102300 GTTGGGTTTGCTTCGTTGCT 59.898 50.000 4.36 0.00 0.00 3.91
110 111 0.874175 GGTTGGGTTTGCTTCGTTGC 60.874 55.000 0.00 0.00 0.00 4.17
111 112 0.593773 CGGTTGGGTTTGCTTCGTTG 60.594 55.000 0.00 0.00 0.00 4.10
112 113 1.730451 CCGGTTGGGTTTGCTTCGTT 61.730 55.000 0.00 0.00 0.00 3.85
113 114 2.190841 CCGGTTGGGTTTGCTTCGT 61.191 57.895 0.00 0.00 0.00 3.85
114 115 2.642700 CCGGTTGGGTTTGCTTCG 59.357 61.111 0.00 0.00 0.00 3.79
115 116 2.338620 GCCGGTTGGGTTTGCTTC 59.661 61.111 1.90 0.00 38.44 3.86
116 117 3.230990 GGCCGGTTGGGTTTGCTT 61.231 61.111 1.90 0.00 38.44 3.91
117 118 4.531426 TGGCCGGTTGGGTTTGCT 62.531 61.111 1.90 0.00 38.44 3.91
118 119 3.989787 CTGGCCGGTTGGGTTTGC 61.990 66.667 2.29 0.00 38.44 3.68
119 120 2.203422 TCTGGCCGGTTGGGTTTG 60.203 61.111 12.43 0.00 38.44 2.93
120 121 2.002018 TTCTCTGGCCGGTTGGGTTT 62.002 55.000 12.43 0.00 38.44 3.27
121 122 2.002018 TTTCTCTGGCCGGTTGGGTT 62.002 55.000 12.43 0.00 38.44 4.11
122 123 2.002018 TTTTCTCTGGCCGGTTGGGT 62.002 55.000 12.43 0.00 38.44 4.51
123 124 0.825840 TTTTTCTCTGGCCGGTTGGG 60.826 55.000 12.43 0.96 39.58 4.12
124 125 0.598065 CTTTTTCTCTGGCCGGTTGG 59.402 55.000 12.43 3.56 38.77 3.77
125 126 0.598065 CCTTTTTCTCTGGCCGGTTG 59.402 55.000 12.43 6.23 0.00 3.77
126 127 0.539669 CCCTTTTTCTCTGGCCGGTT 60.540 55.000 12.43 0.00 0.00 4.44
127 128 1.074951 CCCTTTTTCTCTGGCCGGT 59.925 57.895 12.43 0.00 0.00 5.28
128 129 0.960861 GTCCCTTTTTCTCTGGCCGG 60.961 60.000 4.71 4.71 0.00 6.13
129 130 1.298859 CGTCCCTTTTTCTCTGGCCG 61.299 60.000 0.00 0.00 0.00 6.13
130 131 0.036306 TCGTCCCTTTTTCTCTGGCC 59.964 55.000 0.00 0.00 0.00 5.36
131 132 1.535896 GTTCGTCCCTTTTTCTCTGGC 59.464 52.381 0.00 0.00 0.00 4.85
132 133 2.548480 GTGTTCGTCCCTTTTTCTCTGG 59.452 50.000 0.00 0.00 0.00 3.86
133 134 3.202906 TGTGTTCGTCCCTTTTTCTCTG 58.797 45.455 0.00 0.00 0.00 3.35
134 135 3.553828 TGTGTTCGTCCCTTTTTCTCT 57.446 42.857 0.00 0.00 0.00 3.10
135 136 3.242969 GGTTGTGTTCGTCCCTTTTTCTC 60.243 47.826 0.00 0.00 0.00 2.87
136 137 2.686405 GGTTGTGTTCGTCCCTTTTTCT 59.314 45.455 0.00 0.00 0.00 2.52
137 138 2.686405 AGGTTGTGTTCGTCCCTTTTTC 59.314 45.455 0.00 0.00 0.00 2.29
138 139 2.730382 AGGTTGTGTTCGTCCCTTTTT 58.270 42.857 0.00 0.00 0.00 1.94
139 140 2.430248 AGGTTGTGTTCGTCCCTTTT 57.570 45.000 0.00 0.00 0.00 2.27
140 141 2.430248 AAGGTTGTGTTCGTCCCTTT 57.570 45.000 0.00 0.00 31.56 3.11
141 142 3.408634 CATAAGGTTGTGTTCGTCCCTT 58.591 45.455 0.00 0.00 38.91 3.95
142 143 2.874457 GCATAAGGTTGTGTTCGTCCCT 60.874 50.000 0.00 0.00 0.00 4.20
143 144 1.467342 GCATAAGGTTGTGTTCGTCCC 59.533 52.381 0.00 0.00 0.00 4.46
144 145 2.095919 GTGCATAAGGTTGTGTTCGTCC 60.096 50.000 0.00 0.00 0.00 4.79
145 146 2.546368 TGTGCATAAGGTTGTGTTCGTC 59.454 45.455 0.00 0.00 0.00 4.20
146 147 2.566913 TGTGCATAAGGTTGTGTTCGT 58.433 42.857 0.00 0.00 0.00 3.85
147 148 3.617540 TTGTGCATAAGGTTGTGTTCG 57.382 42.857 0.00 0.00 0.00 3.95
148 149 5.348164 AGTTTTGTGCATAAGGTTGTGTTC 58.652 37.500 0.00 0.00 0.00 3.18
149 150 5.105554 TGAGTTTTGTGCATAAGGTTGTGTT 60.106 36.000 0.00 0.00 0.00 3.32
150 151 4.400884 TGAGTTTTGTGCATAAGGTTGTGT 59.599 37.500 0.00 0.00 0.00 3.72
151 152 4.739716 GTGAGTTTTGTGCATAAGGTTGTG 59.260 41.667 0.00 0.00 0.00 3.33
152 153 4.202111 GGTGAGTTTTGTGCATAAGGTTGT 60.202 41.667 0.00 0.00 0.00 3.32
153 154 4.037923 AGGTGAGTTTTGTGCATAAGGTTG 59.962 41.667 0.00 0.00 0.00 3.77
154 155 4.215109 AGGTGAGTTTTGTGCATAAGGTT 58.785 39.130 0.00 0.00 0.00 3.50
155 156 3.821033 GAGGTGAGTTTTGTGCATAAGGT 59.179 43.478 0.00 0.00 0.00 3.50
156 157 3.191371 GGAGGTGAGTTTTGTGCATAAGG 59.809 47.826 0.00 0.00 0.00 2.69
157 158 3.820467 TGGAGGTGAGTTTTGTGCATAAG 59.180 43.478 0.00 0.00 0.00 1.73
158 159 3.826524 TGGAGGTGAGTTTTGTGCATAA 58.173 40.909 0.00 0.00 0.00 1.90
159 160 3.500448 TGGAGGTGAGTTTTGTGCATA 57.500 42.857 0.00 0.00 0.00 3.14
160 161 2.362077 GTTGGAGGTGAGTTTTGTGCAT 59.638 45.455 0.00 0.00 0.00 3.96
161 162 1.748493 GTTGGAGGTGAGTTTTGTGCA 59.252 47.619 0.00 0.00 0.00 4.57
162 163 1.748493 TGTTGGAGGTGAGTTTTGTGC 59.252 47.619 0.00 0.00 0.00 4.57
163 164 3.065371 GTCTGTTGGAGGTGAGTTTTGTG 59.935 47.826 0.00 0.00 0.00 3.33
164 165 3.279434 GTCTGTTGGAGGTGAGTTTTGT 58.721 45.455 0.00 0.00 0.00 2.83
165 166 3.278574 TGTCTGTTGGAGGTGAGTTTTG 58.721 45.455 0.00 0.00 0.00 2.44
166 167 3.644966 TGTCTGTTGGAGGTGAGTTTT 57.355 42.857 0.00 0.00 0.00 2.43
167 168 3.545703 CTTGTCTGTTGGAGGTGAGTTT 58.454 45.455 0.00 0.00 0.00 2.66
168 169 2.746472 GCTTGTCTGTTGGAGGTGAGTT 60.746 50.000 0.00 0.00 0.00 3.01
169 170 1.202698 GCTTGTCTGTTGGAGGTGAGT 60.203 52.381 0.00 0.00 0.00 3.41
170 171 1.202687 TGCTTGTCTGTTGGAGGTGAG 60.203 52.381 0.00 0.00 0.00 3.51
171 172 0.836606 TGCTTGTCTGTTGGAGGTGA 59.163 50.000 0.00 0.00 0.00 4.02
172 173 1.679139 TTGCTTGTCTGTTGGAGGTG 58.321 50.000 0.00 0.00 0.00 4.00
173 174 2.664402 ATTGCTTGTCTGTTGGAGGT 57.336 45.000 0.00 0.00 0.00 3.85
174 175 3.820467 TGTTATTGCTTGTCTGTTGGAGG 59.180 43.478 0.00 0.00 0.00 4.30
175 176 4.275689 TGTGTTATTGCTTGTCTGTTGGAG 59.724 41.667 0.00 0.00 0.00 3.86
176 177 4.203226 TGTGTTATTGCTTGTCTGTTGGA 58.797 39.130 0.00 0.00 0.00 3.53
177 178 4.566545 TGTGTTATTGCTTGTCTGTTGG 57.433 40.909 0.00 0.00 0.00 3.77
178 179 6.884096 TTTTGTGTTATTGCTTGTCTGTTG 57.116 33.333 0.00 0.00 0.00 3.33
179 180 7.763528 TCATTTTTGTGTTATTGCTTGTCTGTT 59.236 29.630 0.00 0.00 0.00 3.16
180 181 7.264221 TCATTTTTGTGTTATTGCTTGTCTGT 58.736 30.769 0.00 0.00 0.00 3.41
181 182 7.436080 ACTCATTTTTGTGTTATTGCTTGTCTG 59.564 33.333 0.00 0.00 0.00 3.51
182 183 7.491682 ACTCATTTTTGTGTTATTGCTTGTCT 58.508 30.769 0.00 0.00 0.00 3.41
183 184 7.357532 CGACTCATTTTTGTGTTATTGCTTGTC 60.358 37.037 0.00 0.00 0.00 3.18
184 185 6.417635 CGACTCATTTTTGTGTTATTGCTTGT 59.582 34.615 0.00 0.00 0.00 3.16
185 186 6.636447 TCGACTCATTTTTGTGTTATTGCTTG 59.364 34.615 0.00 0.00 0.00 4.01
186 187 6.734137 TCGACTCATTTTTGTGTTATTGCTT 58.266 32.000 0.00 0.00 0.00 3.91
187 188 6.017109 ACTCGACTCATTTTTGTGTTATTGCT 60.017 34.615 0.00 0.00 0.00 3.91
188 189 6.142817 ACTCGACTCATTTTTGTGTTATTGC 58.857 36.000 0.00 0.00 0.00 3.56
189 190 7.321271 GTGACTCGACTCATTTTTGTGTTATTG 59.679 37.037 0.00 0.00 0.00 1.90
190 191 7.011950 TGTGACTCGACTCATTTTTGTGTTATT 59.988 33.333 0.00 0.00 0.00 1.40
191 192 6.481976 TGTGACTCGACTCATTTTTGTGTTAT 59.518 34.615 0.00 0.00 0.00 1.89
192 193 5.813157 TGTGACTCGACTCATTTTTGTGTTA 59.187 36.000 0.00 0.00 0.00 2.41
193 194 4.634004 TGTGACTCGACTCATTTTTGTGTT 59.366 37.500 0.00 0.00 0.00 3.32
194 195 4.188462 TGTGACTCGACTCATTTTTGTGT 58.812 39.130 0.00 0.00 0.00 3.72
195 196 4.794248 TGTGACTCGACTCATTTTTGTG 57.206 40.909 0.00 0.00 0.00 3.33
196 197 4.260212 CGTTGTGACTCGACTCATTTTTGT 60.260 41.667 0.00 0.00 0.00 2.83
197 198 4.203828 CGTTGTGACTCGACTCATTTTTG 58.796 43.478 0.00 0.00 0.00 2.44
198 199 3.303132 GCGTTGTGACTCGACTCATTTTT 60.303 43.478 0.00 0.00 0.00 1.94
199 200 2.221055 GCGTTGTGACTCGACTCATTTT 59.779 45.455 0.00 0.00 0.00 1.82
200 201 1.792949 GCGTTGTGACTCGACTCATTT 59.207 47.619 0.00 0.00 0.00 2.32
201 202 1.419374 GCGTTGTGACTCGACTCATT 58.581 50.000 0.00 0.00 0.00 2.57
202 203 0.388649 GGCGTTGTGACTCGACTCAT 60.389 55.000 0.00 0.00 31.86 2.90
203 204 1.007734 GGCGTTGTGACTCGACTCA 60.008 57.895 5.16 0.00 31.86 3.41
204 205 1.733399 GGGCGTTGTGACTCGACTC 60.733 63.158 6.56 0.00 35.25 3.36
205 206 2.338984 GGGCGTTGTGACTCGACT 59.661 61.111 6.56 0.00 35.25 4.18
206 207 2.737376 GGGGCGTTGTGACTCGAC 60.737 66.667 5.16 2.04 0.00 4.20
207 208 4.351938 CGGGGCGTTGTGACTCGA 62.352 66.667 5.16 0.00 0.00 4.04
208 209 3.851845 TTCGGGGCGTTGTGACTCG 62.852 63.158 0.00 0.00 0.00 4.18
209 210 2.027625 CTTCGGGGCGTTGTGACTC 61.028 63.158 0.00 0.00 0.00 3.36
210 211 1.466025 TACTTCGGGGCGTTGTGACT 61.466 55.000 0.00 0.00 0.00 3.41
211 212 0.600782 TTACTTCGGGGCGTTGTGAC 60.601 55.000 0.00 0.00 0.00 3.67
212 213 0.106335 TTTACTTCGGGGCGTTGTGA 59.894 50.000 0.00 0.00 0.00 3.58
213 214 0.236449 GTTTACTTCGGGGCGTTGTG 59.764 55.000 0.00 0.00 0.00 3.33
214 215 0.886043 GGTTTACTTCGGGGCGTTGT 60.886 55.000 0.00 0.00 0.00 3.32
215 216 0.885596 TGGTTTACTTCGGGGCGTTG 60.886 55.000 0.00 0.00 0.00 4.10
216 217 0.886043 GTGGTTTACTTCGGGGCGTT 60.886 55.000 0.00 0.00 0.00 4.84
217 218 1.301953 GTGGTTTACTTCGGGGCGT 60.302 57.895 0.00 0.00 0.00 5.68
218 219 0.885596 TTGTGGTTTACTTCGGGGCG 60.886 55.000 0.00 0.00 0.00 6.13
219 220 1.001048 GTTTGTGGTTTACTTCGGGGC 60.001 52.381 0.00 0.00 0.00 5.80
220 221 2.292292 CAGTTTGTGGTTTACTTCGGGG 59.708 50.000 0.00 0.00 0.00 5.73
221 222 3.207778 TCAGTTTGTGGTTTACTTCGGG 58.792 45.455 0.00 0.00 0.00 5.14
222 223 3.875134 ACTCAGTTTGTGGTTTACTTCGG 59.125 43.478 0.00 0.00 0.00 4.30
223 224 4.569162 TCACTCAGTTTGTGGTTTACTTCG 59.431 41.667 0.00 0.00 36.21 3.79
224 225 5.007724 CCTCACTCAGTTTGTGGTTTACTTC 59.992 44.000 0.00 0.00 36.21 3.01
225 226 4.881850 CCTCACTCAGTTTGTGGTTTACTT 59.118 41.667 0.00 0.00 36.21 2.24
226 227 4.080526 ACCTCACTCAGTTTGTGGTTTACT 60.081 41.667 0.00 0.00 37.53 2.24
227 228 4.196971 ACCTCACTCAGTTTGTGGTTTAC 58.803 43.478 0.00 0.00 37.53 2.01
228 229 4.497291 ACCTCACTCAGTTTGTGGTTTA 57.503 40.909 0.00 0.00 37.53 2.01
229 230 3.366052 ACCTCACTCAGTTTGTGGTTT 57.634 42.857 0.00 0.00 37.53 3.27
230 231 3.366052 AACCTCACTCAGTTTGTGGTT 57.634 42.857 3.56 3.56 43.02 3.67
231 232 3.016736 CAAACCTCACTCAGTTTGTGGT 58.983 45.455 7.31 0.00 44.94 4.16
232 233 3.698029 CAAACCTCACTCAGTTTGTGG 57.302 47.619 7.31 0.00 44.94 4.17
236 237 1.569072 ACCCCAAACCTCACTCAGTTT 59.431 47.619 0.00 0.00 36.65 2.66
237 238 1.133792 CACCCCAAACCTCACTCAGTT 60.134 52.381 0.00 0.00 0.00 3.16
238 239 0.474184 CACCCCAAACCTCACTCAGT 59.526 55.000 0.00 0.00 0.00 3.41
239 240 0.890996 GCACCCCAAACCTCACTCAG 60.891 60.000 0.00 0.00 0.00 3.35
240 241 1.150536 GCACCCCAAACCTCACTCA 59.849 57.895 0.00 0.00 0.00 3.41
241 242 1.150536 TGCACCCCAAACCTCACTC 59.849 57.895 0.00 0.00 0.00 3.51
242 243 1.152756 GTGCACCCCAAACCTCACT 60.153 57.895 5.22 0.00 0.00 3.41
243 244 1.454847 TGTGCACCCCAAACCTCAC 60.455 57.895 15.69 0.00 0.00 3.51
244 245 1.152777 CTGTGCACCCCAAACCTCA 60.153 57.895 15.69 0.00 0.00 3.86
245 246 1.903404 CCTGTGCACCCCAAACCTC 60.903 63.158 15.69 0.00 0.00 3.85
246 247 2.198426 CCTGTGCACCCCAAACCT 59.802 61.111 15.69 0.00 0.00 3.50
247 248 3.615709 GCCTGTGCACCCCAAACC 61.616 66.667 15.69 0.00 37.47 3.27
248 249 3.977244 CGCCTGTGCACCCCAAAC 61.977 66.667 15.69 0.00 37.32 2.93
249 250 3.723097 TTCGCCTGTGCACCCCAAA 62.723 57.895 15.69 0.00 37.32 3.28
250 251 4.196778 TTCGCCTGTGCACCCCAA 62.197 61.111 15.69 0.00 37.32 4.12
251 252 4.641645 CTTCGCCTGTGCACCCCA 62.642 66.667 15.69 0.00 37.32 4.96
256 257 3.279116 GTGTGCTTCGCCTGTGCA 61.279 61.111 0.00 0.00 37.32 4.57
257 258 4.374702 CGTGTGCTTCGCCTGTGC 62.375 66.667 0.00 0.00 0.00 4.57
258 259 2.943345 GACGTGTGCTTCGCCTGTG 61.943 63.158 0.00 0.00 0.00 3.66
259 260 1.802337 TAGACGTGTGCTTCGCCTGT 61.802 55.000 0.00 0.00 0.00 4.00
260 261 1.073216 CTAGACGTGTGCTTCGCCTG 61.073 60.000 0.00 0.00 0.00 4.85
261 262 1.213013 CTAGACGTGTGCTTCGCCT 59.787 57.895 0.00 0.00 0.00 5.52
262 263 1.071567 GTCTAGACGTGTGCTTCGCC 61.072 60.000 7.22 0.00 0.00 5.54
263 264 0.386858 TGTCTAGACGTGTGCTTCGC 60.387 55.000 17.85 0.00 0.00 4.70
264 265 2.046283 TTGTCTAGACGTGTGCTTCG 57.954 50.000 17.85 0.00 0.00 3.79
265 266 4.789095 TTTTTGTCTAGACGTGTGCTTC 57.211 40.909 17.85 0.00 0.00 3.86
266 267 5.751243 AATTTTTGTCTAGACGTGTGCTT 57.249 34.783 17.85 4.77 0.00 3.91
267 268 5.756347 TGTAATTTTTGTCTAGACGTGTGCT 59.244 36.000 17.85 4.27 0.00 4.40
268 269 5.844396 GTGTAATTTTTGTCTAGACGTGTGC 59.156 40.000 17.85 4.58 0.00 4.57
269 270 6.062646 CGTGTAATTTTTGTCTAGACGTGTG 58.937 40.000 17.85 0.00 30.28 3.82
270 271 5.750067 ACGTGTAATTTTTGTCTAGACGTGT 59.250 36.000 17.85 0.00 41.98 4.49
271 272 6.206600 ACGTGTAATTTTTGTCTAGACGTG 57.793 37.500 17.85 0.00 41.98 4.49
272 273 6.642917 CAACGTGTAATTTTTGTCTAGACGT 58.357 36.000 17.85 5.30 44.40 4.34
273 274 5.558888 GCAACGTGTAATTTTTGTCTAGACG 59.441 40.000 17.85 4.66 38.05 4.18
274 275 5.558888 CGCAACGTGTAATTTTTGTCTAGAC 59.441 40.000 16.32 16.32 0.00 2.59
275 276 5.672051 CGCAACGTGTAATTTTTGTCTAGA 58.328 37.500 0.00 0.00 0.00 2.43
276 277 4.317291 GCGCAACGTGTAATTTTTGTCTAG 59.683 41.667 0.30 0.00 0.00 2.43
277 278 4.024725 AGCGCAACGTGTAATTTTTGTCTA 60.025 37.500 11.47 0.00 0.00 2.59
278 279 3.040099 GCGCAACGTGTAATTTTTGTCT 58.960 40.909 0.30 0.00 0.00 3.41
279 280 3.040099 AGCGCAACGTGTAATTTTTGTC 58.960 40.909 11.47 0.00 0.00 3.18
280 281 2.786578 CAGCGCAACGTGTAATTTTTGT 59.213 40.909 11.47 0.00 0.00 2.83
281 282 2.152868 CCAGCGCAACGTGTAATTTTTG 59.847 45.455 11.47 0.00 0.00 2.44
282 283 2.389998 CCAGCGCAACGTGTAATTTTT 58.610 42.857 11.47 0.00 0.00 1.94
283 284 1.928595 GCCAGCGCAACGTGTAATTTT 60.929 47.619 11.47 0.00 34.03 1.82
284 285 0.386731 GCCAGCGCAACGTGTAATTT 60.387 50.000 11.47 0.00 34.03 1.82
285 286 1.209127 GCCAGCGCAACGTGTAATT 59.791 52.632 11.47 0.00 34.03 1.40
286 287 1.635663 GAGCCAGCGCAACGTGTAAT 61.636 55.000 11.47 0.00 37.52 1.89
287 288 2.280524 AGCCAGCGCAACGTGTAA 60.281 55.556 11.47 0.00 37.52 2.41
288 289 2.736995 GAGCCAGCGCAACGTGTA 60.737 61.111 11.47 0.00 37.52 2.90
289 290 4.908687 TGAGCCAGCGCAACGTGT 62.909 61.111 11.47 0.00 37.52 4.49
290 291 4.374702 GTGAGCCAGCGCAACGTG 62.375 66.667 11.47 0.00 37.52 4.49
291 292 4.908687 TGTGAGCCAGCGCAACGT 62.909 61.111 11.47 0.00 37.52 3.99
292 293 3.648982 TTGTGAGCCAGCGCAACG 61.649 61.111 11.47 0.00 37.52 4.10
294 295 3.648982 CGTTGTGAGCCAGCGCAA 61.649 61.111 11.47 0.00 40.89 4.85
298 299 3.050275 GGGACGTTGTGAGCCAGC 61.050 66.667 0.00 0.00 0.00 4.85
311 312 1.801765 GCTCGTATTTGACTCCGGGAC 60.802 57.143 0.00 0.00 0.00 4.46
312 313 0.458669 GCTCGTATTTGACTCCGGGA 59.541 55.000 0.00 0.00 0.00 5.14
313 314 0.870307 CGCTCGTATTTGACTCCGGG 60.870 60.000 0.00 0.00 0.00 5.73
314 315 0.870307 CCGCTCGTATTTGACTCCGG 60.870 60.000 0.00 0.00 0.00 5.14
315 316 0.099968 TCCGCTCGTATTTGACTCCG 59.900 55.000 0.00 0.00 0.00 4.63
316 317 1.134560 ACTCCGCTCGTATTTGACTCC 59.865 52.381 0.00 0.00 0.00 3.85
317 318 2.159421 TCACTCCGCTCGTATTTGACTC 60.159 50.000 0.00 0.00 0.00 3.36
318 319 1.816835 TCACTCCGCTCGTATTTGACT 59.183 47.619 0.00 0.00 0.00 3.41
319 320 1.918609 GTCACTCCGCTCGTATTTGAC 59.081 52.381 0.00 0.00 0.00 3.18
320 321 1.466866 CGTCACTCCGCTCGTATTTGA 60.467 52.381 0.00 0.00 0.00 2.69
321 322 0.914551 CGTCACTCCGCTCGTATTTG 59.085 55.000 0.00 0.00 0.00 2.32
322 323 0.179145 CCGTCACTCCGCTCGTATTT 60.179 55.000 0.00 0.00 0.00 1.40
323 324 1.432251 CCGTCACTCCGCTCGTATT 59.568 57.895 0.00 0.00 0.00 1.89
324 325 2.478890 CCCGTCACTCCGCTCGTAT 61.479 63.158 0.00 0.00 0.00 3.06
325 326 3.129502 CCCGTCACTCCGCTCGTA 61.130 66.667 0.00 0.00 0.00 3.43
327 328 4.477975 GACCCGTCACTCCGCTCG 62.478 72.222 0.00 0.00 0.00 5.03
328 329 3.063084 AGACCCGTCACTCCGCTC 61.063 66.667 0.00 0.00 0.00 5.03
329 330 3.374402 CAGACCCGTCACTCCGCT 61.374 66.667 0.00 0.00 0.00 5.52
330 331 2.711922 ATCAGACCCGTCACTCCGC 61.712 63.158 0.00 0.00 0.00 5.54
331 332 1.139734 CATCAGACCCGTCACTCCG 59.860 63.158 0.00 0.00 0.00 4.63
332 333 1.153549 GCATCAGACCCGTCACTCC 60.154 63.158 0.00 0.00 0.00 3.85
333 334 0.737715 GTGCATCAGACCCGTCACTC 60.738 60.000 0.00 0.00 0.00 3.51
334 335 1.293498 GTGCATCAGACCCGTCACT 59.707 57.895 0.00 0.00 0.00 3.41
335 336 0.602638 TTGTGCATCAGACCCGTCAC 60.603 55.000 0.00 0.00 0.00 3.67
336 337 0.107643 TTTGTGCATCAGACCCGTCA 59.892 50.000 0.00 0.00 0.00 4.35
337 338 1.197721 CTTTTGTGCATCAGACCCGTC 59.802 52.381 0.00 0.00 0.00 4.79
338 339 1.202758 TCTTTTGTGCATCAGACCCGT 60.203 47.619 0.00 0.00 0.00 5.28
339 340 1.522668 TCTTTTGTGCATCAGACCCG 58.477 50.000 0.00 0.00 0.00 5.28
340 341 2.352127 GCTTCTTTTGTGCATCAGACCC 60.352 50.000 0.00 0.00 0.00 4.46
341 342 2.294233 TGCTTCTTTTGTGCATCAGACC 59.706 45.455 0.00 0.00 0.00 3.85
342 343 3.004106 AGTGCTTCTTTTGTGCATCAGAC 59.996 43.478 0.00 0.00 39.00 3.51
343 344 3.216800 AGTGCTTCTTTTGTGCATCAGA 58.783 40.909 0.00 0.00 39.00 3.27
344 345 3.637998 AGTGCTTCTTTTGTGCATCAG 57.362 42.857 0.00 0.00 39.00 2.90
345 346 3.253188 GGTAGTGCTTCTTTTGTGCATCA 59.747 43.478 0.00 0.00 39.00 3.07
346 347 3.253188 TGGTAGTGCTTCTTTTGTGCATC 59.747 43.478 0.00 0.00 39.00 3.91
347 348 3.221771 TGGTAGTGCTTCTTTTGTGCAT 58.778 40.909 0.00 0.00 39.00 3.96
348 349 2.618241 CTGGTAGTGCTTCTTTTGTGCA 59.382 45.455 0.00 0.00 0.00 4.57
349 350 2.605580 GCTGGTAGTGCTTCTTTTGTGC 60.606 50.000 0.00 0.00 0.00 4.57
350 351 2.030805 GGCTGGTAGTGCTTCTTTTGTG 60.031 50.000 0.00 0.00 0.00 3.33
351 352 2.230660 GGCTGGTAGTGCTTCTTTTGT 58.769 47.619 0.00 0.00 0.00 2.83
352 353 1.197721 CGGCTGGTAGTGCTTCTTTTG 59.802 52.381 0.00 0.00 0.00 2.44
353 354 1.523758 CGGCTGGTAGTGCTTCTTTT 58.476 50.000 0.00 0.00 0.00 2.27
354 355 0.321653 CCGGCTGGTAGTGCTTCTTT 60.322 55.000 2.29 0.00 0.00 2.52
355 356 1.296715 CCGGCTGGTAGTGCTTCTT 59.703 57.895 2.29 0.00 0.00 2.52
356 357 2.660064 CCCGGCTGGTAGTGCTTCT 61.660 63.158 11.58 0.00 0.00 2.85
357 358 2.125106 CCCGGCTGGTAGTGCTTC 60.125 66.667 11.58 0.00 0.00 3.86
376 377 0.603707 TGCTTCACTAGTGCACCTGC 60.604 55.000 18.45 15.71 42.50 4.85
377 378 1.882912 TTGCTTCACTAGTGCACCTG 58.117 50.000 18.45 9.26 36.37 4.00
378 379 2.618709 GTTTTGCTTCACTAGTGCACCT 59.381 45.455 18.45 3.48 36.37 4.00
379 380 2.357637 TGTTTTGCTTCACTAGTGCACC 59.642 45.455 18.45 8.52 36.37 5.01
380 381 3.363178 GTGTTTTGCTTCACTAGTGCAC 58.637 45.455 18.45 9.40 36.37 4.57
381 382 2.031560 CGTGTTTTGCTTCACTAGTGCA 59.968 45.455 18.45 10.15 33.07 4.57
382 383 2.286833 TCGTGTTTTGCTTCACTAGTGC 59.713 45.455 18.45 7.38 33.07 4.40
383 384 3.555956 ACTCGTGTTTTGCTTCACTAGTG 59.444 43.478 17.17 17.17 38.51 2.74
384 385 3.793559 ACTCGTGTTTTGCTTCACTAGT 58.206 40.909 0.00 0.00 36.34 2.57
385 386 4.270084 TCAACTCGTGTTTTGCTTCACTAG 59.730 41.667 0.00 0.00 33.52 2.57
386 387 4.185394 TCAACTCGTGTTTTGCTTCACTA 58.815 39.130 0.00 0.00 33.52 2.74
387 388 3.006940 TCAACTCGTGTTTTGCTTCACT 58.993 40.909 0.00 0.00 33.52 3.41
388 389 3.181510 ACTCAACTCGTGTTTTGCTTCAC 60.182 43.478 0.00 0.00 33.52 3.18
389 390 3.006940 ACTCAACTCGTGTTTTGCTTCA 58.993 40.909 0.00 0.00 33.52 3.02
390 391 3.063452 TCACTCAACTCGTGTTTTGCTTC 59.937 43.478 0.00 0.00 33.52 3.86
391 392 3.006940 TCACTCAACTCGTGTTTTGCTT 58.993 40.909 0.00 0.00 33.52 3.91
392 393 2.609459 CTCACTCAACTCGTGTTTTGCT 59.391 45.455 0.00 0.00 33.52 3.91
393 394 2.607635 TCTCACTCAACTCGTGTTTTGC 59.392 45.455 0.00 0.00 33.52 3.68
394 395 4.319046 CCATCTCACTCAACTCGTGTTTTG 60.319 45.833 0.00 0.00 33.52 2.44
395 396 3.809832 CCATCTCACTCAACTCGTGTTTT 59.190 43.478 0.00 0.00 33.52 2.43
396 397 3.181465 ACCATCTCACTCAACTCGTGTTT 60.181 43.478 0.00 0.00 33.52 2.83
397 398 2.365617 ACCATCTCACTCAACTCGTGTT 59.634 45.455 0.00 0.00 36.75 3.32
398 399 1.964223 ACCATCTCACTCAACTCGTGT 59.036 47.619 0.00 0.00 34.14 4.49
399 400 2.332104 CACCATCTCACTCAACTCGTG 58.668 52.381 0.00 0.00 0.00 4.35
400 401 1.273606 CCACCATCTCACTCAACTCGT 59.726 52.381 0.00 0.00 0.00 4.18
401 402 1.404717 CCCACCATCTCACTCAACTCG 60.405 57.143 0.00 0.00 0.00 4.18
402 403 1.902508 TCCCACCATCTCACTCAACTC 59.097 52.381 0.00 0.00 0.00 3.01
403 404 2.030027 TCCCACCATCTCACTCAACT 57.970 50.000 0.00 0.00 0.00 3.16
404 405 2.026822 ACATCCCACCATCTCACTCAAC 60.027 50.000 0.00 0.00 0.00 3.18
405 406 2.269023 ACATCCCACCATCTCACTCAA 58.731 47.619 0.00 0.00 0.00 3.02
406 407 1.956869 ACATCCCACCATCTCACTCA 58.043 50.000 0.00 0.00 0.00 3.41
407 408 2.766263 TGTACATCCCACCATCTCACTC 59.234 50.000 0.00 0.00 0.00 3.51
408 409 2.832838 TGTACATCCCACCATCTCACT 58.167 47.619 0.00 0.00 0.00 3.41
409 410 3.055094 ACTTGTACATCCCACCATCTCAC 60.055 47.826 0.00 0.00 0.00 3.51
410 411 3.055167 CACTTGTACATCCCACCATCTCA 60.055 47.826 0.00 0.00 0.00 3.27
411 412 3.197766 TCACTTGTACATCCCACCATCTC 59.802 47.826 0.00 0.00 0.00 2.75
412 413 3.055094 GTCACTTGTACATCCCACCATCT 60.055 47.826 0.00 0.00 0.00 2.90
413 414 3.270877 GTCACTTGTACATCCCACCATC 58.729 50.000 0.00 0.00 0.00 3.51
414 415 2.642311 TGTCACTTGTACATCCCACCAT 59.358 45.455 0.00 0.00 0.00 3.55
415 416 2.050918 TGTCACTTGTACATCCCACCA 58.949 47.619 0.00 0.00 0.00 4.17
416 417 2.851263 TGTCACTTGTACATCCCACC 57.149 50.000 0.00 0.00 0.00 4.61
422 423 2.418746 GCCTCGGATGTCACTTGTACAT 60.419 50.000 0.00 0.00 40.23 2.29
423 424 1.067142 GCCTCGGATGTCACTTGTACA 60.067 52.381 0.00 0.00 0.00 2.90
424 425 1.067142 TGCCTCGGATGTCACTTGTAC 60.067 52.381 0.00 0.00 0.00 2.90
425 426 1.067142 GTGCCTCGGATGTCACTTGTA 60.067 52.381 0.00 0.00 0.00 2.41
426 427 0.320771 GTGCCTCGGATGTCACTTGT 60.321 55.000 0.00 0.00 0.00 3.16
427 428 0.320683 TGTGCCTCGGATGTCACTTG 60.321 55.000 8.40 0.00 0.00 3.16
428 429 0.320771 GTGTGCCTCGGATGTCACTT 60.321 55.000 8.40 0.00 0.00 3.16
429 430 1.293498 GTGTGCCTCGGATGTCACT 59.707 57.895 8.40 0.00 0.00 3.41
430 431 0.602638 TTGTGTGCCTCGGATGTCAC 60.603 55.000 0.00 0.00 0.00 3.67
431 432 0.320683 CTTGTGTGCCTCGGATGTCA 60.321 55.000 0.00 0.00 0.00 3.58
432 433 0.320771 ACTTGTGTGCCTCGGATGTC 60.321 55.000 0.00 0.00 0.00 3.06
433 434 0.603707 CACTTGTGTGCCTCGGATGT 60.604 55.000 0.00 0.00 37.38 3.06
434 435 1.300971 CCACTTGTGTGCCTCGGATG 61.301 60.000 0.00 0.00 42.54 3.51
435 436 1.003355 CCACTTGTGTGCCTCGGAT 60.003 57.895 0.00 0.00 42.54 4.18
436 437 1.691195 TTCCACTTGTGTGCCTCGGA 61.691 55.000 0.00 0.00 42.54 4.55
437 438 1.227823 TTCCACTTGTGTGCCTCGG 60.228 57.895 0.00 0.00 42.54 4.63
438 439 1.845809 GCTTCCACTTGTGTGCCTCG 61.846 60.000 0.00 0.00 42.54 4.63
439 440 0.819259 TGCTTCCACTTGTGTGCCTC 60.819 55.000 0.00 0.00 42.54 4.70
440 441 0.820891 CTGCTTCCACTTGTGTGCCT 60.821 55.000 0.00 0.00 42.54 4.75
441 442 0.819259 TCTGCTTCCACTTGTGTGCC 60.819 55.000 0.00 0.00 42.54 5.01
442 443 0.308993 GTCTGCTTCCACTTGTGTGC 59.691 55.000 0.00 2.66 42.54 4.57
443 444 1.331756 GTGTCTGCTTCCACTTGTGTG 59.668 52.381 0.00 0.00 43.45 3.82
444 445 1.668419 GTGTCTGCTTCCACTTGTGT 58.332 50.000 0.00 0.00 0.00 3.72
445 446 0.583438 CGTGTCTGCTTCCACTTGTG 59.417 55.000 0.00 0.00 0.00 3.33
446 447 0.464036 TCGTGTCTGCTTCCACTTGT 59.536 50.000 0.00 0.00 0.00 3.16
447 448 1.143305 CTCGTGTCTGCTTCCACTTG 58.857 55.000 0.00 0.00 0.00 3.16
448 449 1.040646 TCTCGTGTCTGCTTCCACTT 58.959 50.000 0.00 0.00 0.00 3.16
449 450 1.067283 CATCTCGTGTCTGCTTCCACT 60.067 52.381 0.00 0.00 0.00 4.00
450 451 1.337260 ACATCTCGTGTCTGCTTCCAC 60.337 52.381 0.00 0.00 35.77 4.02
451 452 0.969149 ACATCTCGTGTCTGCTTCCA 59.031 50.000 0.00 0.00 35.77 3.53
452 453 3.822607 ACATCTCGTGTCTGCTTCC 57.177 52.632 0.00 0.00 35.77 3.46
460 461 0.038526 GGGTGTTCGACATCTCGTGT 60.039 55.000 0.00 0.00 45.83 4.49
461 462 1.071019 CGGGTGTTCGACATCTCGTG 61.071 60.000 0.00 0.00 41.02 4.35
462 463 1.211969 CGGGTGTTCGACATCTCGT 59.788 57.895 0.00 0.00 41.02 4.18
463 464 0.388134 AACGGGTGTTCGACATCTCG 60.388 55.000 0.00 0.00 41.65 4.04
464 465 1.347320 GAACGGGTGTTCGACATCTC 58.653 55.000 0.00 0.00 44.55 2.75
465 466 3.509388 GAACGGGTGTTCGACATCT 57.491 52.632 0.00 0.00 44.55 2.90
473 474 1.385528 GTTGGTTCAGAACGGGTGTT 58.614 50.000 7.22 0.00 42.23 3.32
474 475 0.812412 CGTTGGTTCAGAACGGGTGT 60.812 55.000 7.22 0.00 41.95 4.16
475 476 1.938861 CGTTGGTTCAGAACGGGTG 59.061 57.895 7.22 0.00 41.95 4.61
476 477 1.890510 GCGTTGGTTCAGAACGGGT 60.891 57.895 7.22 0.00 45.01 5.28
477 478 1.841663 CTGCGTTGGTTCAGAACGGG 61.842 60.000 7.22 0.00 45.01 5.28
478 479 1.569493 CTGCGTTGGTTCAGAACGG 59.431 57.895 7.22 0.00 45.01 4.44
480 481 0.586802 GTCCTGCGTTGGTTCAGAAC 59.413 55.000 4.52 4.52 32.26 3.01
481 482 0.179234 TGTCCTGCGTTGGTTCAGAA 59.821 50.000 0.00 0.00 32.26 3.02
482 483 0.531974 GTGTCCTGCGTTGGTTCAGA 60.532 55.000 0.00 0.00 32.26 3.27
483 484 1.831389 CGTGTCCTGCGTTGGTTCAG 61.831 60.000 0.00 0.00 0.00 3.02
484 485 1.885388 CGTGTCCTGCGTTGGTTCA 60.885 57.895 0.00 0.00 0.00 3.18
485 486 2.935955 CGTGTCCTGCGTTGGTTC 59.064 61.111 0.00 0.00 0.00 3.62
486 487 3.276846 GCGTGTCCTGCGTTGGTT 61.277 61.111 0.00 0.00 0.00 3.67
487 488 4.539083 TGCGTGTCCTGCGTTGGT 62.539 61.111 0.00 0.00 34.24 3.67
488 489 4.012895 GTGCGTGTCCTGCGTTGG 62.013 66.667 0.00 0.00 34.24 3.77
489 490 4.354212 CGTGCGTGTCCTGCGTTG 62.354 66.667 0.00 0.00 34.24 4.10
493 494 4.760047 ATCCCGTGCGTGTCCTGC 62.760 66.667 0.00 0.00 0.00 4.85
494 495 2.815211 CATCCCGTGCGTGTCCTG 60.815 66.667 0.00 0.00 0.00 3.86
495 496 4.760047 GCATCCCGTGCGTGTCCT 62.760 66.667 0.00 0.00 45.23 3.85
551 552 7.800155 TGAAACTGACACAATTGATTAGACA 57.200 32.000 13.59 4.97 0.00 3.41
570 571 8.926715 AAGGTAACATCAACTTCTTTTGAAAC 57.073 30.769 0.00 0.00 38.95 2.78
640 641 3.912496 TCACTGGTCCTCCACATATTG 57.088 47.619 0.00 0.00 39.03 1.90
648 649 1.839994 TCCATTCATCACTGGTCCTCC 59.160 52.381 0.00 0.00 34.03 4.30
688 689 1.737838 TGCGCTCCACTTCTATTTGG 58.262 50.000 9.73 0.00 0.00 3.28
748 749 5.412526 TGCGTCCGTTTATTTATTGGATC 57.587 39.130 0.00 0.00 0.00 3.36
755 756 6.483385 TCTGAAATTGCGTCCGTTTATTTA 57.517 33.333 0.00 0.00 0.00 1.40
762 766 1.298859 GGCTCTGAAATTGCGTCCGT 61.299 55.000 0.00 0.00 0.00 4.69
768 772 3.581024 TTGACATGGCTCTGAAATTGC 57.419 42.857 0.00 0.00 0.00 3.56
780 784 6.927416 TCAAGAAAGATGGATTTTGACATGG 58.073 36.000 0.00 0.00 0.00 3.66
800 804 3.761752 ACCCGACAAATTACCCATTCAAG 59.238 43.478 0.00 0.00 0.00 3.02
803 807 3.314357 GCTACCCGACAAATTACCCATTC 59.686 47.826 0.00 0.00 0.00 2.67
819 824 4.448210 TCCGTTCATTTATTCAGCTACCC 58.552 43.478 0.00 0.00 0.00 3.69
836 841 3.112580 CGTTTCTTGCAACAAATCCGTT 58.887 40.909 3.11 0.00 0.00 4.44
840 845 3.004315 TCCTCCGTTTCTTGCAACAAATC 59.996 43.478 3.11 0.00 0.00 2.17
868 873 8.181573 GCTCGAAAATATTTGAATTAGACACCA 58.818 33.333 0.39 0.00 0.00 4.17
869 874 8.398665 AGCTCGAAAATATTTGAATTAGACACC 58.601 33.333 0.39 0.00 0.00 4.16
870 875 9.214953 CAGCTCGAAAATATTTGAATTAGACAC 57.785 33.333 0.39 0.00 0.00 3.67
871 876 7.910162 GCAGCTCGAAAATATTTGAATTAGACA 59.090 33.333 0.39 0.00 0.00 3.41
872 877 7.377131 GGCAGCTCGAAAATATTTGAATTAGAC 59.623 37.037 0.39 0.00 0.00 2.59
874 879 6.358030 CGGCAGCTCGAAAATATTTGAATTAG 59.642 38.462 0.39 0.00 0.00 1.73
1021 1054 4.780554 GGAATGGAAGGGGGATTTAACAAA 59.219 41.667 0.00 0.00 0.00 2.83
1448 1511 3.784511 ACCATAGCAGATGGAGATTGG 57.215 47.619 21.12 0.00 41.64 3.16
1450 1513 5.369110 AGAGAAACCATAGCAGATGGAGATT 59.631 40.000 21.12 13.40 41.64 2.40
1451 1514 4.906664 AGAGAAACCATAGCAGATGGAGAT 59.093 41.667 21.12 8.78 41.64 2.75
1461 1524 4.078639 ACCATAGCAGAGAAACCATAGC 57.921 45.455 0.00 0.00 0.00 2.97
1462 1525 6.375455 ACAAAACCATAGCAGAGAAACCATAG 59.625 38.462 0.00 0.00 0.00 2.23
1464 1527 5.079643 ACAAAACCATAGCAGAGAAACCAT 58.920 37.500 0.00 0.00 0.00 3.55
1465 1528 4.469657 ACAAAACCATAGCAGAGAAACCA 58.530 39.130 0.00 0.00 0.00 3.67
1466 1529 5.453567 AACAAAACCATAGCAGAGAAACC 57.546 39.130 0.00 0.00 0.00 3.27
1522 1613 2.738643 CGCCATCCACTAACTACACAGG 60.739 54.545 0.00 0.00 0.00 4.00
1539 1638 3.836365 TTACATTCAGATCCATCGCCA 57.164 42.857 0.00 0.00 0.00 5.69
1564 1680 5.350633 TCATTTCTTGCAAGAACCAACAAG 58.649 37.500 35.54 20.31 44.18 3.16
1658 1815 4.084507 CGACGTTCTTGCTGATGAATTTC 58.915 43.478 0.00 0.00 0.00 2.17
1664 1821 1.995484 ACATCGACGTTCTTGCTGATG 59.005 47.619 0.00 0.00 39.20 3.07
1706 1863 4.418392 CCCATTCAGCAAGAAAATCGAAG 58.582 43.478 0.00 0.00 40.22 3.79
1755 1919 0.322546 AATGACTTTGGACCTCCGGC 60.323 55.000 0.00 0.00 39.43 6.13
1756 1920 1.679032 GGAATGACTTTGGACCTCCGG 60.679 57.143 0.00 0.00 39.43 5.14
1889 2067 3.357203 ACGCCTCTTCAGATAGAGACAA 58.643 45.455 9.85 0.00 43.54 3.18
1930 2108 1.133884 AGGCATCAGACATGTGGGATG 60.134 52.381 22.89 22.89 40.00 3.51
1937 2115 5.061179 TGATACATCAAGGCATCAGACATG 58.939 41.667 0.00 0.00 33.08 3.21
2016 2226 2.906389 TGTGAATAACAGGAGGCTCACT 59.094 45.455 17.69 8.24 35.36 3.41
2087 2297 7.872993 AGTTTTCGAAGACAGATGAGTATGAAA 59.127 33.333 19.69 0.00 34.32 2.69
2092 2302 6.382608 CAGAGTTTTCGAAGACAGATGAGTA 58.617 40.000 19.69 0.00 34.32 2.59
2135 2346 7.011389 CGAGCAATTCTATAACCATTTGACTGA 59.989 37.037 0.00 0.00 0.00 3.41
2159 2370 2.095969 CGGCTTTTATGTTGAGCAACGA 60.096 45.455 8.63 0.00 43.94 3.85
2179 2390 0.452987 TAGTACGTGCAGGTTAGCCG 59.547 55.000 18.35 2.90 40.50 5.52
2190 2401 4.158025 AGGAGGTGACAGATTTAGTACGTG 59.842 45.833 0.00 0.00 0.00 4.49
2195 2406 6.702329 CAAAGTAGGAGGTGACAGATTTAGT 58.298 40.000 0.00 0.00 0.00 2.24
2196 2407 5.582665 GCAAAGTAGGAGGTGACAGATTTAG 59.417 44.000 0.00 0.00 0.00 1.85
2197 2408 5.248477 AGCAAAGTAGGAGGTGACAGATTTA 59.752 40.000 0.00 0.00 0.00 1.40
2202 2413 3.368531 GGTAGCAAAGTAGGAGGTGACAG 60.369 52.174 0.00 0.00 0.00 3.51
2211 2422 0.899720 TGTCCCGGTAGCAAAGTAGG 59.100 55.000 0.00 0.00 0.00 3.18
2240 2451 3.857157 TTCAGATATTAGCCACCCCAC 57.143 47.619 0.00 0.00 0.00 4.61
2243 2484 7.665559 TGATTACAATTCAGATATTAGCCACCC 59.334 37.037 0.00 0.00 0.00 4.61
2294 2535 5.259632 AGGAGGAAAATCCATGAGAAAGTG 58.740 41.667 0.00 0.00 42.26 3.16
2318 2559 6.882610 AAAGTAAAGTCAGTGATCAATGCA 57.117 33.333 18.10 4.88 0.00 3.96
2482 2726 4.626604 CCATCAAATGTTCCCGATGTTTTG 59.373 41.667 0.00 0.00 34.70 2.44
2487 2731 2.620115 CTCCCATCAAATGTTCCCGATG 59.380 50.000 0.00 0.00 35.97 3.84
2500 2745 4.199310 GTCGATTGATTTTCCTCCCATCA 58.801 43.478 0.00 0.00 0.00 3.07
2555 2800 1.872952 CACAAGCATTCAGACGGTCAA 59.127 47.619 11.27 0.00 0.00 3.18
2556 2801 1.202639 ACACAAGCATTCAGACGGTCA 60.203 47.619 11.27 0.00 0.00 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.