Multiple sequence alignment - TraesCS6A01G060900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G060900 chr6A 100.000 6426 0 0 1 6426 32738466 32744891 0.000000e+00 11867.0
1 TraesCS6A01G060900 chr6A 86.316 2682 273 43 2830 5473 46699289 46696664 0.000000e+00 2833.0
2 TraesCS6A01G060900 chr6A 85.134 2906 269 86 3213 6033 45354260 45357087 0.000000e+00 2822.0
3 TraesCS6A01G060900 chr6A 84.113 2203 261 50 3302 5473 32812163 32810019 0.000000e+00 2047.0
4 TraesCS6A01G060900 chr6A 82.760 2268 291 63 3239 5473 32885589 32883389 0.000000e+00 1930.0
5 TraesCS6A01G060900 chr6A 89.487 1227 99 17 4255 5473 31751846 31750642 0.000000e+00 1524.0
6 TraesCS6A01G060900 chr6A 85.445 742 45 27 1615 2335 31754436 31753737 0.000000e+00 713.0
7 TraesCS6A01G060900 chr6A 81.818 891 66 44 1616 2447 46700632 46699779 0.000000e+00 660.0
8 TraesCS6A01G060900 chr6A 83.664 453 38 13 823 1240 32887962 32887511 1.680000e-105 394.0
9 TraesCS6A01G060900 chr6A 84.731 334 27 11 2830 3147 45353938 45354263 4.840000e-81 313.0
10 TraesCS6A01G060900 chr6A 88.636 220 19 4 2465 2683 46699714 46699500 4.940000e-66 263.0
11 TraesCS6A01G060900 chr6A 75.209 597 94 30 2274 2835 32886536 32885959 3.870000e-57 233.0
12 TraesCS6A01G060900 chr6A 85.350 157 22 1 2679 2835 31753444 31753289 1.850000e-35 161.0
13 TraesCS6A01G060900 chr6A 80.693 202 14 14 5469 5647 31750580 31750381 4.040000e-27 134.0
14 TraesCS6A01G060900 chr6A 83.108 148 8 5 5702 5849 46696116 46695986 1.130000e-22 119.0
15 TraesCS6A01G060900 chr6A 89.655 87 9 0 1572 1658 32739998 32740084 1.890000e-20 111.0
16 TraesCS6A01G060900 chr6A 89.655 87 9 0 1533 1619 32740037 32740123 1.890000e-20 111.0
17 TraesCS6A01G060900 chr6A 85.333 75 2 4 5814 5888 45356924 45356989 1.160000e-07 69.4
18 TraesCS6A01G060900 chr6D 94.285 5459 155 52 823 6193 30099817 30094428 0.000000e+00 8207.0
19 TraesCS6A01G060900 chr6D 88.972 2675 208 40 2838 5473 31269822 31267196 0.000000e+00 3225.0
20 TraesCS6A01G060900 chr6D 83.055 2213 275 54 3290 5473 29925581 29927722 0.000000e+00 1917.0
21 TraesCS6A01G060900 chr6D 85.999 1457 119 40 4255 5647 31473235 31474670 0.000000e+00 1482.0
22 TraesCS6A01G060900 chr6D 89.328 937 57 19 1672 2582 31270888 31269969 0.000000e+00 1136.0
23 TraesCS6A01G060900 chr6D 83.932 1002 88 31 1615 2582 31470571 31471533 0.000000e+00 891.0
24 TraesCS6A01G060900 chr6D 85.880 432 40 6 823 1252 31271641 31271229 2.130000e-119 440.0
25 TraesCS6A01G060900 chr6D 86.650 397 44 6 823 1212 29848978 29849372 1.280000e-116 431.0
26 TraesCS6A01G060900 chr6D 85.922 412 32 14 823 1214 29922329 29922734 3.580000e-112 416.0
27 TraesCS6A01G060900 chr6D 86.216 399 37 11 823 1205 31469705 31470101 3.580000e-112 416.0
28 TraesCS6A01G060900 chr6D 76.268 552 84 30 2312 2835 29850446 29850978 3.850000e-62 250.0
29 TraesCS6A01G060900 chr6D 91.124 169 12 2 6261 6426 30094424 30094256 6.480000e-55 226.0
30 TraesCS6A01G060900 chr6D 86.624 157 20 1 2679 2835 31471640 31471795 8.570000e-39 172.0
31 TraesCS6A01G060900 chr6D 93.023 86 6 0 5469 5554 31267134 31267049 6.760000e-25 126.0
32 TraesCS6A01G060900 chr6D 91.667 84 7 0 1575 1658 30099102 30099019 4.070000e-22 117.0
33 TraesCS6A01G060900 chr6D 92.771 83 2 1 5767 5849 31266846 31266768 4.070000e-22 117.0
34 TraesCS6A01G060900 chr6D 89.286 84 9 0 1536 1619 30099063 30098980 8.810000e-19 106.0
35 TraesCS6A01G060900 chr6D 89.535 86 4 1 6056 6141 31266561 31266641 3.170000e-18 104.0
36 TraesCS6A01G060900 chr6D 94.000 50 3 0 344 393 228072013 228071964 6.910000e-10 76.8
37 TraesCS6A01G060900 chr6D 94.000 50 3 0 344 393 359964708 359964659 6.910000e-10 76.8
38 TraesCS6A01G060900 chr6B 93.871 5237 223 42 392 5572 57414802 57419996 0.000000e+00 7803.0
39 TraesCS6A01G060900 chr6B 86.284 2683 275 45 2833 5473 79877460 79880091 0.000000e+00 2830.0
40 TraesCS6A01G060900 chr6B 88.030 2406 198 39 3216 5556 50409585 50407205 0.000000e+00 2765.0
41 TraesCS6A01G060900 chr6B 83.341 2215 270 54 3290 5473 57733690 57731544 0.000000e+00 1954.0
42 TraesCS6A01G060900 chr6B 88.897 1297 106 18 4169 5454 56396144 56394875 0.000000e+00 1563.0
43 TraesCS6A01G060900 chr6B 89.551 1225 99 14 4255 5473 56377829 56376628 0.000000e+00 1526.0
44 TraesCS6A01G060900 chr6B 86.629 890 40 29 5562 6424 57420017 57420854 0.000000e+00 911.0
45 TraesCS6A01G060900 chr6B 87.963 648 49 15 2838 3470 56379327 56378694 0.000000e+00 737.0
46 TraesCS6A01G060900 chr6B 83.644 697 56 21 1909 2582 56380282 56379621 2.560000e-168 603.0
47 TraesCS6A01G060900 chr6B 83.680 625 49 14 1852 2447 79876362 79876962 2.040000e-149 540.0
48 TraesCS6A01G060900 chr6B 87.126 435 32 7 823 1252 56399475 56399060 7.540000e-129 472.0
49 TraesCS6A01G060900 chr6B 82.149 577 35 22 2032 2582 56398309 56397775 3.560000e-117 433.0
50 TraesCS6A01G060900 chr6B 85.354 396 38 10 823 1204 56381568 56381179 6.040000e-105 392.0
51 TraesCS6A01G060900 chr6B 82.036 501 49 15 2683 3150 50410072 50409580 7.810000e-104 388.0
52 TraesCS6A01G060900 chr6B 84.450 418 37 13 823 1214 57737008 57736593 2.810000e-103 387.0
53 TraesCS6A01G060900 chr6B 89.103 312 18 10 1614 1916 56398644 56398340 2.190000e-99 374.0
54 TraesCS6A01G060900 chr6B 92.969 256 17 1 1615 1870 56380527 56380273 7.870000e-99 372.0
55 TraesCS6A01G060900 chr6B 84.119 403 32 17 2465 2835 79877027 79877429 1.700000e-95 361.0
56 TraesCS6A01G060900 chr6B 76.471 595 103 25 838 1397 79875482 79876074 8.150000e-74 289.0
57 TraesCS6A01G060900 chr6B 78.630 365 50 12 2273 2626 57735037 57734690 3.900000e-52 217.0
58 TraesCS6A01G060900 chr6B 86.432 199 15 6 1616 1807 79876094 79876287 2.350000e-49 207.0
59 TraesCS6A01G060900 chr6B 87.261 157 19 1 2679 2835 56379514 56379359 1.840000e-40 178.0
60 TraesCS6A01G060900 chr6B 88.591 149 9 5 5702 5849 79880577 79880718 2.380000e-39 174.0
61 TraesCS6A01G060900 chr6B 86.624 157 19 2 2679 2835 56397667 56397513 8.570000e-39 172.0
62 TraesCS6A01G060900 chr6B 90.805 87 5 1 6044 6130 50406765 50406682 5.270000e-21 113.0
63 TraesCS6A01G060900 chr6B 78.607 201 20 12 5469 5647 56376566 56376367 1.890000e-20 111.0
64 TraesCS6A01G060900 chr6B 86.207 87 12 0 1572 1658 57415947 57416033 1.910000e-15 95.3
65 TraesCS6A01G060900 chrUn 86.528 2687 271 46 2830 5473 27473131 27475769 0.000000e+00 2872.0
66 TraesCS6A01G060900 chrUn 87.459 2464 184 49 3216 5598 137913395 137910976 0.000000e+00 2723.0
67 TraesCS6A01G060900 chrUn 82.628 898 72 35 1616 2447 27471762 27472641 0.000000e+00 717.0
68 TraesCS6A01G060900 chrUn 85.660 523 46 11 1611 2115 68355776 68356287 2.050000e-144 523.0
69 TraesCS6A01G060900 chrUn 83.140 344 30 12 2830 3153 137913724 137913389 8.150000e-74 289.0
70 TraesCS6A01G060900 chrUn 76.355 664 79 32 829 1432 268238650 268239295 1.050000e-72 285.0
71 TraesCS6A01G060900 chrUn 88.182 220 20 2 2465 2683 27472706 27472920 2.300000e-64 257.0
72 TraesCS6A01G060900 chrUn 88.591 149 9 3 5702 5849 27476267 27476408 2.380000e-39 174.0
73 TraesCS6A01G060900 chrUn 85.714 154 21 1 2683 2835 137913904 137913751 1.850000e-35 161.0
74 TraesCS6A01G060900 chrUn 95.349 43 2 0 1577 1619 27471762 27471804 1.160000e-07 69.4
75 TraesCS6A01G060900 chr2D 81.786 2284 286 68 3244 5473 48565445 48567652 0.000000e+00 1794.0
76 TraesCS6A01G060900 chr2D 87.348 1067 69 15 1613 2626 48562890 48563943 0.000000e+00 1162.0
77 TraesCS6A01G060900 chr2D 83.225 614 66 16 823 1402 48562249 48562859 4.410000e-146 529.0
78 TraesCS6A01G060900 chr2D 95.745 47 2 0 1536 1582 48562891 48562937 6.910000e-10 76.8
79 TraesCS6A01G060900 chr2B 87.070 727 82 8 4155 4873 96277603 96278325 0.000000e+00 811.0
80 TraesCS6A01G060900 chr2B 95.890 73 3 0 6193 6265 5369102 5369174 1.130000e-22 119.0
81 TraesCS6A01G060900 chr2B 95.890 73 3 0 6193 6265 635081046 635080974 1.130000e-22 119.0
82 TraesCS6A01G060900 chr4B 86.795 727 84 8 4155 4873 614205369 614204647 0.000000e+00 800.0
83 TraesCS6A01G060900 chr4B 87.826 115 10 4 5702 5815 585760993 585760882 1.450000e-26 132.0
84 TraesCS6A01G060900 chr4B 95.833 72 3 0 6193 6264 399102364 399102435 4.070000e-22 117.0
85 TraesCS6A01G060900 chr4B 95.833 72 3 0 6193 6264 450316496 450316567 4.070000e-22 117.0
86 TraesCS6A01G060900 chr4B 92.105 76 6 0 6193 6268 438377431 438377506 2.450000e-19 108.0
87 TraesCS6A01G060900 chr4B 94.000 50 3 0 344 393 508384280 508384329 6.910000e-10 76.8
88 TraesCS6A01G060900 chr3B 86.795 727 84 8 4155 4873 701122829 701122107 0.000000e+00 800.0
89 TraesCS6A01G060900 chr3B 86.712 730 79 7 4155 4873 753065793 753066515 0.000000e+00 795.0
90 TraesCS6A01G060900 chr3B 94.805 77 4 0 6194 6270 801314229 801314305 3.150000e-23 121.0
91 TraesCS6A01G060900 chr3B 89.655 58 4 2 336 391 203309500 203309557 8.940000e-09 73.1
92 TraesCS6A01G060900 chr7B 86.657 727 85 8 4155 4873 680449707 680450429 0.000000e+00 795.0
93 TraesCS6A01G060900 chr7B 86.575 730 79 8 4155 4873 680418542 680419263 0.000000e+00 787.0
94 TraesCS6A01G060900 chr7B 84.314 153 21 3 2287 2439 566839743 566839594 5.190000e-31 147.0
95 TraesCS6A01G060900 chr5A 83.365 523 50 15 1611 2116 655642271 655642773 3.530000e-122 449.0
96 TraesCS6A01G060900 chr5A 90.189 265 22 3 1854 2115 655640962 655641225 6.170000e-90 342.0
97 TraesCS6A01G060900 chr5B 82.143 392 46 14 3860 4240 75534583 75534961 1.340000e-81 315.0
98 TraesCS6A01G060900 chr5B 87.611 113 10 4 5702 5813 346850761 346850870 1.880000e-25 128.0
99 TraesCS6A01G060900 chr3A 89.262 149 16 0 1103 1251 290428716 290428568 3.060000e-43 187.0
100 TraesCS6A01G060900 chr2A 93.671 79 5 0 6193 6271 16151573 16151495 1.130000e-22 119.0
101 TraesCS6A01G060900 chr1B 95.890 73 3 0 6193 6265 611133012 611132940 1.130000e-22 119.0
102 TraesCS6A01G060900 chr4D 100.000 42 0 0 344 385 505950775 505950816 1.920000e-10 78.7
103 TraesCS6A01G060900 chr4D 94.000 50 3 0 344 393 403065772 403065723 6.910000e-10 76.8
104 TraesCS6A01G060900 chr1D 94.000 50 3 0 344 393 99927385 99927336 6.910000e-10 76.8
105 TraesCS6A01G060900 chr1D 94.000 50 3 0 344 393 111792221 111792172 6.910000e-10 76.8
106 TraesCS6A01G060900 chr1D 94.000 50 3 0 344 393 238837192 238837143 6.910000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G060900 chr6A 32738466 32744891 6425 False 11867.000000 11867 100.000000 1 6426 1 chr6A.!!$F1 6425
1 TraesCS6A01G060900 chr6A 32810019 32812163 2144 True 2047.000000 2047 84.113000 3302 5473 1 chr6A.!!$R1 2171
2 TraesCS6A01G060900 chr6A 45353938 45357087 3149 False 1068.133333 2822 85.066000 2830 6033 3 chr6A.!!$F3 3203
3 TraesCS6A01G060900 chr6A 46695986 46700632 4646 True 968.750000 2833 84.969500 1616 5849 4 chr6A.!!$R4 4233
4 TraesCS6A01G060900 chr6A 32883389 32887962 4573 True 852.333333 1930 80.544333 823 5473 3 chr6A.!!$R3 4650
5 TraesCS6A01G060900 chr6A 31750381 31754436 4055 True 633.000000 1524 85.243750 1615 5647 4 chr6A.!!$R2 4032
6 TraesCS6A01G060900 chr6D 30094256 30099817 5561 True 2164.000000 8207 91.590500 823 6426 4 chr6D.!!$R3 5603
7 TraesCS6A01G060900 chr6D 29922329 29927722 5393 False 1166.500000 1917 84.488500 823 5473 2 chr6D.!!$F3 4650
8 TraesCS6A01G060900 chr6D 31266768 31271641 4873 True 1008.800000 3225 89.994800 823 5849 5 chr6D.!!$R4 5026
9 TraesCS6A01G060900 chr6D 31469705 31474670 4965 False 740.250000 1482 85.692750 823 5647 4 chr6D.!!$F4 4824
10 TraesCS6A01G060900 chr6D 29848978 29850978 2000 False 340.500000 431 81.459000 823 2835 2 chr6D.!!$F2 2012
11 TraesCS6A01G060900 chr6B 57414802 57419996 5194 False 7803.000000 7803 93.871000 392 5572 1 chr6B.!!$F1 5180
12 TraesCS6A01G060900 chr6B 50406682 50410072 3390 True 1088.666667 2765 86.957000 2683 6130 3 chr6B.!!$R1 3447
13 TraesCS6A01G060900 chr6B 57731544 57737008 5464 True 852.666667 1954 82.140333 823 5473 3 chr6B.!!$R4 4650
14 TraesCS6A01G060900 chr6B 79875482 79880718 5236 False 733.500000 2830 84.262833 838 5849 6 chr6B.!!$F3 5011
15 TraesCS6A01G060900 chr6B 56394875 56399475 4600 True 602.800000 1563 86.779800 823 5454 5 chr6B.!!$R3 4631
16 TraesCS6A01G060900 chr6B 56376367 56381568 5201 True 559.857143 1526 86.478429 823 5647 7 chr6B.!!$R2 4824
17 TraesCS6A01G060900 chr6B 57415947 57420854 4907 False 503.150000 911 86.418000 1572 6424 2 chr6B.!!$F2 4852
18 TraesCS6A01G060900 chrUn 137910976 137913904 2928 True 1057.666667 2723 85.437667 2683 5598 3 chrUn.!!$R1 2915
19 TraesCS6A01G060900 chrUn 27471762 27476408 4646 False 817.880000 2872 88.255600 1577 5849 5 chrUn.!!$F3 4272
20 TraesCS6A01G060900 chrUn 68355776 68356287 511 False 523.000000 523 85.660000 1611 2115 1 chrUn.!!$F1 504
21 TraesCS6A01G060900 chrUn 268238650 268239295 645 False 285.000000 285 76.355000 829 1432 1 chrUn.!!$F2 603
22 TraesCS6A01G060900 chr2D 48562249 48567652 5403 False 890.450000 1794 87.026000 823 5473 4 chr2D.!!$F1 4650
23 TraesCS6A01G060900 chr2B 96277603 96278325 722 False 811.000000 811 87.070000 4155 4873 1 chr2B.!!$F2 718
24 TraesCS6A01G060900 chr4B 614204647 614205369 722 True 800.000000 800 86.795000 4155 4873 1 chr4B.!!$R2 718
25 TraesCS6A01G060900 chr3B 701122107 701122829 722 True 800.000000 800 86.795000 4155 4873 1 chr3B.!!$R1 718
26 TraesCS6A01G060900 chr3B 753065793 753066515 722 False 795.000000 795 86.712000 4155 4873 1 chr3B.!!$F2 718
27 TraesCS6A01G060900 chr7B 680449707 680450429 722 False 795.000000 795 86.657000 4155 4873 1 chr7B.!!$F2 718
28 TraesCS6A01G060900 chr7B 680418542 680419263 721 False 787.000000 787 86.575000 4155 4873 1 chr7B.!!$F1 718
29 TraesCS6A01G060900 chr5A 655640962 655642773 1811 False 395.500000 449 86.777000 1611 2116 2 chr5A.!!$F1 505

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
973 1007 0.025001 CACGAGTTAGCGGAATTGCG 59.975 55.000 15.68 15.68 40.67 4.85 F
1607 2231 1.006102 ACAAGGAGAACAGGCGACG 60.006 57.895 0.00 0.00 0.00 5.12 F
2712 5621 1.067565 AGTGATACGCGGCATCATAGG 60.068 52.381 23.04 0.00 35.02 2.57 F
3776 7506 5.240623 TCCATGTTCAACTCAGCGTAATTTT 59.759 36.000 0.00 0.00 0.00 1.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2532 4301 0.329596 AGTGGACAAGATTCAGGCCC 59.670 55.000 0.0 0.0 0.00 5.80 R
2740 5649 1.329256 AGGACGTGTGTACTTCTGCT 58.671 50.000 0.0 0.0 34.87 4.24 R
4400 8225 0.102120 TTGCCGTTGTTCCTTTGCAG 59.898 50.000 0.0 0.0 0.00 4.41 R
5608 9884 4.073169 TCACACGACAACACAAGTTTTC 57.927 40.909 0.0 0.0 35.28 2.29 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.502191 TTTGTTTGGCAGACAACAGTC 57.498 42.857 21.62 0.00 39.19 3.51
22 23 3.552132 TGTTTGGCAGACAACAGTCTA 57.448 42.857 8.59 0.00 40.54 2.59
24 25 2.169832 TTGGCAGACAACAGTCTAGC 57.830 50.000 0.00 5.00 40.54 3.42
25 26 1.342074 TGGCAGACAACAGTCTAGCT 58.658 50.000 14.74 0.00 40.54 3.32
26 27 1.273606 TGGCAGACAACAGTCTAGCTC 59.726 52.381 14.74 9.02 40.54 4.09
27 28 1.273606 GGCAGACAACAGTCTAGCTCA 59.726 52.381 14.74 0.00 40.54 4.26
30 31 3.809832 GCAGACAACAGTCTAGCTCAAAA 59.190 43.478 0.00 0.00 40.54 2.44
31 32 4.084118 GCAGACAACAGTCTAGCTCAAAAG 60.084 45.833 0.00 0.00 40.54 2.27
34 35 6.144724 CAGACAACAGTCTAGCTCAAAAGTAC 59.855 42.308 0.00 0.00 40.54 2.73
40 41 8.042944 ACAGTCTAGCTCAAAAGTACTAGTAC 57.957 38.462 23.03 23.03 34.89 2.73
42 43 8.178964 CAGTCTAGCTCAAAAGTACTAGTACTG 58.821 40.741 31.26 21.28 44.96 2.74
43 44 7.337436 AGTCTAGCTCAAAAGTACTAGTACTGG 59.663 40.741 31.26 23.40 44.96 4.00
45 46 4.081586 AGCTCAAAAGTACTAGTACTGGCC 60.082 45.833 31.26 17.79 44.96 5.36
49 50 5.010922 TCAAAAGTACTAGTACTGGCCGAAA 59.989 40.000 31.26 13.70 44.96 3.46
50 51 5.473066 AAAGTACTAGTACTGGCCGAAAA 57.527 39.130 31.26 0.00 44.96 2.29
51 52 4.446994 AGTACTAGTACTGGCCGAAAAC 57.553 45.455 30.33 5.40 44.11 2.43
52 53 3.828451 AGTACTAGTACTGGCCGAAAACA 59.172 43.478 30.33 0.00 44.11 2.83
53 54 3.975168 ACTAGTACTGGCCGAAAACAT 57.025 42.857 5.39 0.00 0.00 2.71
55 56 2.851263 AGTACTGGCCGAAAACATGA 57.149 45.000 0.00 0.00 0.00 3.07
57 58 1.467342 GTACTGGCCGAAAACATGACC 59.533 52.381 0.00 0.00 0.00 4.02
58 59 0.179004 ACTGGCCGAAAACATGACCA 60.179 50.000 0.00 0.00 0.00 4.02
59 60 0.240945 CTGGCCGAAAACATGACCAC 59.759 55.000 0.00 0.00 0.00 4.16
62 63 1.234821 GCCGAAAACATGACCACTGA 58.765 50.000 0.00 0.00 0.00 3.41
63 64 1.606668 GCCGAAAACATGACCACTGAA 59.393 47.619 0.00 0.00 0.00 3.02
65 66 3.138304 CCGAAAACATGACCACTGAAGA 58.862 45.455 0.00 0.00 0.00 2.87
66 67 3.563808 CCGAAAACATGACCACTGAAGAA 59.436 43.478 0.00 0.00 0.00 2.52
67 68 4.216257 CCGAAAACATGACCACTGAAGAAT 59.784 41.667 0.00 0.00 0.00 2.40
68 69 5.278463 CCGAAAACATGACCACTGAAGAATT 60.278 40.000 0.00 0.00 0.00 2.17
69 70 5.626543 CGAAAACATGACCACTGAAGAATTG 59.373 40.000 0.00 0.00 0.00 2.32
70 71 5.458041 AAACATGACCACTGAAGAATTGG 57.542 39.130 0.00 0.00 34.74 3.16
71 72 4.104383 ACATGACCACTGAAGAATTGGT 57.896 40.909 0.00 0.00 44.19 3.67
77 78 4.792068 ACCACTGAAGAATTGGTCAGAAA 58.208 39.130 17.76 0.00 43.32 2.52
78 79 4.580580 ACCACTGAAGAATTGGTCAGAAAC 59.419 41.667 17.76 0.00 43.32 2.78
91 92 4.585879 GGTCAGAAACCTAATTACAGCCA 58.414 43.478 0.00 0.00 45.45 4.75
93 94 5.652452 GGTCAGAAACCTAATTACAGCCATT 59.348 40.000 0.00 0.00 45.45 3.16
95 96 7.201705 GGTCAGAAACCTAATTACAGCCATTAC 60.202 40.741 0.00 0.00 45.45 1.89
96 97 6.537301 TCAGAAACCTAATTACAGCCATTACG 59.463 38.462 0.00 0.00 0.00 3.18
97 98 6.315393 CAGAAACCTAATTACAGCCATTACGT 59.685 38.462 0.00 0.00 0.00 3.57
98 99 6.315393 AGAAACCTAATTACAGCCATTACGTG 59.685 38.462 0.00 0.00 0.00 4.49
100 101 5.493809 ACCTAATTACAGCCATTACGTGTT 58.506 37.500 0.00 0.00 0.00 3.32
101 102 5.353123 ACCTAATTACAGCCATTACGTGTTG 59.647 40.000 0.00 0.00 0.00 3.33
103 104 4.678509 ATTACAGCCATTACGTGTTGTG 57.321 40.909 0.00 0.00 0.00 3.33
104 105 0.591170 ACAGCCATTACGTGTTGTGC 59.409 50.000 0.00 1.97 0.00 4.57
106 107 1.199789 CAGCCATTACGTGTTGTGCAT 59.800 47.619 0.00 0.00 0.00 3.96
107 108 2.418280 CAGCCATTACGTGTTGTGCATA 59.582 45.455 0.00 0.00 0.00 3.14
108 109 2.677836 AGCCATTACGTGTTGTGCATAG 59.322 45.455 0.00 0.00 0.00 2.23
110 111 2.418280 CCATTACGTGTTGTGCATAGCA 59.582 45.455 0.00 0.00 35.60 3.49
111 112 3.120025 CCATTACGTGTTGTGCATAGCAA 60.120 43.478 0.68 0.00 41.47 3.91
112 113 4.471373 CATTACGTGTTGTGCATAGCAAA 58.529 39.130 0.68 0.00 41.47 3.68
114 115 5.864628 TTACGTGTTGTGCATAGCAAATA 57.135 34.783 0.68 0.00 41.47 1.40
115 116 4.757799 ACGTGTTGTGCATAGCAAATAA 57.242 36.364 0.68 0.00 41.47 1.40
116 117 5.309323 ACGTGTTGTGCATAGCAAATAAT 57.691 34.783 0.68 0.00 41.47 1.28
118 119 5.106357 ACGTGTTGTGCATAGCAAATAATGA 60.106 36.000 0.68 0.00 41.47 2.57
120 121 7.131565 CGTGTTGTGCATAGCAAATAATGATA 58.868 34.615 0.68 0.00 41.47 2.15
121 122 7.643371 CGTGTTGTGCATAGCAAATAATGATAA 59.357 33.333 0.68 0.00 41.47 1.75
122 123 9.299963 GTGTTGTGCATAGCAAATAATGATAAA 57.700 29.630 0.68 0.00 41.47 1.40
123 124 9.299963 TGTTGTGCATAGCAAATAATGATAAAC 57.700 29.630 0.00 0.00 41.47 2.01
124 125 9.299963 GTTGTGCATAGCAAATAATGATAAACA 57.700 29.630 0.00 0.00 41.47 2.83
125 126 8.854979 TGTGCATAGCAAATAATGATAAACAC 57.145 30.769 0.00 0.00 41.47 3.32
127 128 8.137437 GTGCATAGCAAATAATGATAAACACCT 58.863 33.333 0.00 0.00 41.47 4.00
129 130 9.612620 GCATAGCAAATAATGATAAACACCTAC 57.387 33.333 0.00 0.00 32.81 3.18
131 132 9.860650 ATAGCAAATAATGATAAACACCTACCA 57.139 29.630 0.00 0.00 32.81 3.25
132 133 8.588290 AGCAAATAATGATAAACACCTACCAA 57.412 30.769 0.00 0.00 0.00 3.67
134 135 9.083080 GCAAATAATGATAAACACCTACCAAAC 57.917 33.333 0.00 0.00 0.00 2.93
138 139 6.677781 ATGATAAACACCTACCAAACATCG 57.322 37.500 0.00 0.00 0.00 3.84
140 141 6.231951 TGATAAACACCTACCAAACATCGAA 58.768 36.000 0.00 0.00 0.00 3.71
141 142 6.882140 TGATAAACACCTACCAAACATCGAAT 59.118 34.615 0.00 0.00 0.00 3.34
142 143 5.371115 AAACACCTACCAAACATCGAATG 57.629 39.130 0.00 0.00 0.00 2.67
143 144 2.747446 ACACCTACCAAACATCGAATGC 59.253 45.455 0.00 0.00 0.00 3.56
145 146 3.378112 CACCTACCAAACATCGAATGCAT 59.622 43.478 0.00 0.00 0.00 3.96
146 147 4.574421 CACCTACCAAACATCGAATGCATA 59.426 41.667 0.00 0.00 0.00 3.14
147 148 4.574828 ACCTACCAAACATCGAATGCATAC 59.425 41.667 0.00 0.00 0.00 2.39
148 149 4.574421 CCTACCAAACATCGAATGCATACA 59.426 41.667 0.00 0.00 0.00 2.29
149 150 4.621068 ACCAAACATCGAATGCATACAG 57.379 40.909 0.00 0.00 0.00 2.74
150 151 4.260985 ACCAAACATCGAATGCATACAGA 58.739 39.130 0.00 0.00 0.00 3.41
152 153 5.357878 ACCAAACATCGAATGCATACAGATT 59.642 36.000 0.00 0.00 0.00 2.40
153 154 5.911280 CCAAACATCGAATGCATACAGATTC 59.089 40.000 0.00 0.00 0.00 2.52
154 155 6.458615 CCAAACATCGAATGCATACAGATTCA 60.459 38.462 0.00 0.00 0.00 2.57
155 156 6.872628 AACATCGAATGCATACAGATTCAT 57.127 33.333 0.00 0.00 0.00 2.57
157 158 7.967890 ACATCGAATGCATACAGATTCATTA 57.032 32.000 0.00 0.00 30.24 1.90
159 160 8.839343 ACATCGAATGCATACAGATTCATTAAA 58.161 29.630 0.00 0.00 30.24 1.52
160 161 9.667989 CATCGAATGCATACAGATTCATTAAAA 57.332 29.630 0.00 0.00 30.24 1.52
161 162 9.888878 ATCGAATGCATACAGATTCATTAAAAG 57.111 29.630 0.00 0.00 30.24 2.27
162 163 9.108284 TCGAATGCATACAGATTCATTAAAAGA 57.892 29.630 0.00 0.00 30.24 2.52
177 178 9.921637 TTCATTAAAAGATAAACATTGACCCAC 57.078 29.630 0.00 0.00 0.00 4.61
178 179 8.240682 TCATTAAAAGATAAACATTGACCCACG 58.759 33.333 0.00 0.00 0.00 4.94
179 180 7.747155 TTAAAAGATAAACATTGACCCACGA 57.253 32.000 0.00 0.00 0.00 4.35
180 181 6.642707 AAAAGATAAACATTGACCCACGAA 57.357 33.333 0.00 0.00 0.00 3.85
181 182 6.642707 AAAGATAAACATTGACCCACGAAA 57.357 33.333 0.00 0.00 0.00 3.46
182 183 6.834168 AAGATAAACATTGACCCACGAAAT 57.166 33.333 0.00 0.00 0.00 2.17
183 184 6.436843 AGATAAACATTGACCCACGAAATC 57.563 37.500 0.00 0.00 0.00 2.17
184 185 3.934457 AAACATTGACCCACGAAATCC 57.066 42.857 0.00 0.00 0.00 3.01
185 186 1.834188 ACATTGACCCACGAAATCCC 58.166 50.000 0.00 0.00 0.00 3.85
195 196 2.510768 ACGAAATCCCGTGAGATAGC 57.489 50.000 0.00 0.00 41.70 2.97
196 197 2.032620 ACGAAATCCCGTGAGATAGCT 58.967 47.619 0.00 0.00 41.70 3.32
197 198 2.223829 ACGAAATCCCGTGAGATAGCTG 60.224 50.000 0.00 0.00 41.70 4.24
198 199 2.034685 CGAAATCCCGTGAGATAGCTGA 59.965 50.000 0.00 0.00 0.00 4.26
205 206 2.921634 GTGAGATAGCTGACGACACA 57.078 50.000 0.00 0.00 0.00 3.72
206 207 3.428746 GTGAGATAGCTGACGACACAT 57.571 47.619 0.00 0.00 0.00 3.21
207 208 3.367607 GTGAGATAGCTGACGACACATC 58.632 50.000 0.00 0.00 0.00 3.06
210 211 2.621055 AGATAGCTGACGACACATCTCC 59.379 50.000 0.00 0.00 0.00 3.71
211 212 1.834188 TAGCTGACGACACATCTCCA 58.166 50.000 0.00 0.00 0.00 3.86
212 213 0.969149 AGCTGACGACACATCTCCAA 59.031 50.000 0.00 0.00 0.00 3.53
213 214 1.344438 AGCTGACGACACATCTCCAAA 59.656 47.619 0.00 0.00 0.00 3.28
214 215 1.461127 GCTGACGACACATCTCCAAAC 59.539 52.381 0.00 0.00 0.00 2.93
215 216 1.721389 CTGACGACACATCTCCAAACG 59.279 52.381 0.00 0.00 0.00 3.60
216 217 0.438830 GACGACACATCTCCAAACGC 59.561 55.000 0.00 0.00 0.00 4.84
217 218 0.949105 ACGACACATCTCCAAACGCC 60.949 55.000 0.00 0.00 0.00 5.68
218 219 1.635663 CGACACATCTCCAAACGCCC 61.636 60.000 0.00 0.00 0.00 6.13
219 220 0.321653 GACACATCTCCAAACGCCCT 60.322 55.000 0.00 0.00 0.00 5.19
220 221 0.321653 ACACATCTCCAAACGCCCTC 60.322 55.000 0.00 0.00 0.00 4.30
221 222 1.026718 CACATCTCCAAACGCCCTCC 61.027 60.000 0.00 0.00 0.00 4.30
222 223 1.299648 CATCTCCAAACGCCCTCCA 59.700 57.895 0.00 0.00 0.00 3.86
223 224 0.322456 CATCTCCAAACGCCCTCCAA 60.322 55.000 0.00 0.00 0.00 3.53
224 225 0.322546 ATCTCCAAACGCCCTCCAAC 60.323 55.000 0.00 0.00 0.00 3.77
225 226 2.281208 TCCAAACGCCCTCCAACG 60.281 61.111 0.00 0.00 0.00 4.10
240 241 3.220507 CCAACGATGGTAGACGTAACA 57.779 47.619 3.02 0.00 42.18 2.41
241 242 2.919229 CCAACGATGGTAGACGTAACAC 59.081 50.000 3.02 0.00 42.18 3.32
242 243 3.366679 CCAACGATGGTAGACGTAACACT 60.367 47.826 3.02 0.00 42.18 3.55
244 245 4.871993 ACGATGGTAGACGTAACACTAG 57.128 45.455 0.00 0.00 40.92 2.57
245 246 3.624861 ACGATGGTAGACGTAACACTAGG 59.375 47.826 0.00 0.00 40.92 3.02
246 247 3.873361 CGATGGTAGACGTAACACTAGGA 59.127 47.826 0.00 0.00 0.00 2.94
248 249 5.698089 CGATGGTAGACGTAACACTAGGATA 59.302 44.000 0.00 0.00 0.00 2.59
249 250 6.203530 CGATGGTAGACGTAACACTAGGATAA 59.796 42.308 0.00 0.00 0.00 1.75
250 251 6.932356 TGGTAGACGTAACACTAGGATAAG 57.068 41.667 0.00 0.00 0.00 1.73
251 252 5.824624 TGGTAGACGTAACACTAGGATAAGG 59.175 44.000 0.00 0.00 0.00 2.69
252 253 4.915158 AGACGTAACACTAGGATAAGGC 57.085 45.455 0.00 0.00 0.00 4.35
253 254 4.534797 AGACGTAACACTAGGATAAGGCT 58.465 43.478 0.00 0.00 0.00 4.58
255 256 5.764192 AGACGTAACACTAGGATAAGGCTAG 59.236 44.000 0.00 0.00 0.00 3.42
263 264 6.127026 ACACTAGGATAAGGCTAGGTGAAAAG 60.127 42.308 0.00 0.00 0.00 2.27
265 266 6.672657 ACTAGGATAAGGCTAGGTGAAAAGAA 59.327 38.462 0.00 0.00 0.00 2.52
266 267 5.746284 AGGATAAGGCTAGGTGAAAAGAAC 58.254 41.667 0.00 0.00 0.00 3.01
270 271 4.612264 AGGCTAGGTGAAAAGAACGTTA 57.388 40.909 0.00 0.00 0.00 3.18
271 272 4.313282 AGGCTAGGTGAAAAGAACGTTAC 58.687 43.478 0.00 0.00 0.00 2.50
273 274 4.388165 GGCTAGGTGAAAAGAACGTTACTC 59.612 45.833 0.00 0.00 0.00 2.59
275 276 4.411256 AGGTGAAAAGAACGTTACTCCA 57.589 40.909 0.00 0.00 0.00 3.86
276 277 4.969484 AGGTGAAAAGAACGTTACTCCAT 58.031 39.130 0.00 0.00 0.00 3.41
277 278 4.995487 AGGTGAAAAGAACGTTACTCCATC 59.005 41.667 0.00 0.00 0.00 3.51
278 279 4.995487 GGTGAAAAGAACGTTACTCCATCT 59.005 41.667 0.00 0.00 0.00 2.90
280 281 6.347483 GGTGAAAAGAACGTTACTCCATCTTC 60.347 42.308 0.00 0.00 30.43 2.87
281 282 6.202188 GTGAAAAGAACGTTACTCCATCTTCA 59.798 38.462 0.00 0.00 30.43 3.02
282 283 6.934645 TGAAAAGAACGTTACTCCATCTTCAT 59.065 34.615 0.00 0.00 30.43 2.57
283 284 8.092068 TGAAAAGAACGTTACTCCATCTTCATA 58.908 33.333 0.00 0.00 30.43 2.15
284 285 8.480643 AAAAGAACGTTACTCCATCTTCATAG 57.519 34.615 0.00 0.00 30.43 2.23
285 286 7.406031 AAGAACGTTACTCCATCTTCATAGA 57.594 36.000 0.00 0.00 34.21 1.98
287 288 5.189659 ACGTTACTCCATCTTCATAGAGC 57.810 43.478 0.00 0.00 32.92 4.09
290 291 3.749665 ACTCCATCTTCATAGAGCTGC 57.250 47.619 0.00 0.00 32.92 5.25
291 292 2.368221 ACTCCATCTTCATAGAGCTGCC 59.632 50.000 0.00 0.00 32.92 4.85
293 294 2.103771 TCCATCTTCATAGAGCTGCCAC 59.896 50.000 0.00 0.00 32.92 5.01
294 295 2.492012 CATCTTCATAGAGCTGCCACC 58.508 52.381 0.00 0.00 32.92 4.61
295 296 0.461548 TCTTCATAGAGCTGCCACCG 59.538 55.000 0.00 0.00 0.00 4.94
296 297 0.531532 CTTCATAGAGCTGCCACCGG 60.532 60.000 0.00 0.00 0.00 5.28
309 310 3.315949 ACCGGCTGGCGTTCCTAA 61.316 61.111 22.22 0.00 39.70 2.69
310 311 2.046700 CCGGCTGGCGTTCCTAAA 60.047 61.111 22.22 0.00 0.00 1.85
311 312 2.396157 CCGGCTGGCGTTCCTAAAC 61.396 63.158 22.22 0.00 0.00 2.01
312 313 1.669760 CGGCTGGCGTTCCTAAACA 60.670 57.895 16.07 0.00 34.93 2.83
313 314 1.024579 CGGCTGGCGTTCCTAAACAT 61.025 55.000 16.07 0.00 34.93 2.71
314 315 0.451783 GGCTGGCGTTCCTAAACATG 59.548 55.000 0.00 0.00 34.93 3.21
315 316 1.448985 GCTGGCGTTCCTAAACATGA 58.551 50.000 0.00 0.00 34.93 3.07
316 317 2.017049 GCTGGCGTTCCTAAACATGAT 58.983 47.619 0.00 0.00 34.93 2.45
317 318 3.202906 GCTGGCGTTCCTAAACATGATA 58.797 45.455 0.00 0.00 34.93 2.15
318 319 3.002348 GCTGGCGTTCCTAAACATGATAC 59.998 47.826 0.00 0.00 34.93 2.24
319 320 4.188462 CTGGCGTTCCTAAACATGATACA 58.812 43.478 0.00 0.00 34.93 2.29
320 321 4.776349 TGGCGTTCCTAAACATGATACAT 58.224 39.130 0.00 0.00 34.93 2.29
322 323 5.295787 TGGCGTTCCTAAACATGATACATTC 59.704 40.000 0.00 0.00 34.93 2.67
323 324 5.277828 GGCGTTCCTAAACATGATACATTCC 60.278 44.000 0.00 0.00 34.93 3.01
324 325 5.277828 GCGTTCCTAAACATGATACATTCCC 60.278 44.000 0.00 0.00 34.93 3.97
325 326 6.055588 CGTTCCTAAACATGATACATTCCCT 58.944 40.000 0.00 0.00 34.93 4.20
326 327 7.214381 CGTTCCTAAACATGATACATTCCCTA 58.786 38.462 0.00 0.00 34.93 3.53
328 329 9.057089 GTTCCTAAACATGATACATTCCCTAAG 57.943 37.037 0.00 0.00 35.36 2.18
329 330 7.224297 TCCTAAACATGATACATTCCCTAAGC 58.776 38.462 0.00 0.00 0.00 3.09
330 331 6.998074 CCTAAACATGATACATTCCCTAAGCA 59.002 38.462 0.00 0.00 0.00 3.91
331 332 7.502226 CCTAAACATGATACATTCCCTAAGCAA 59.498 37.037 0.00 0.00 0.00 3.91
336 337 8.052748 ACATGATACATTCCCTAAGCAAACTAA 58.947 33.333 0.00 0.00 0.00 2.24
337 338 8.902806 CATGATACATTCCCTAAGCAAACTAAA 58.097 33.333 0.00 0.00 0.00 1.85
338 339 8.871629 TGATACATTCCCTAAGCAAACTAAAA 57.128 30.769 0.00 0.00 0.00 1.52
339 340 9.303116 TGATACATTCCCTAAGCAAACTAAAAA 57.697 29.630 0.00 0.00 0.00 1.94
361 362 8.996024 AAAAATACTCCGTCCCAAAATTATTG 57.004 30.769 0.00 0.00 0.00 1.90
363 364 6.937436 ATACTCCGTCCCAAAATTATTGTC 57.063 37.500 0.00 0.00 0.00 3.18
364 365 4.918588 ACTCCGTCCCAAAATTATTGTCT 58.081 39.130 0.00 0.00 0.00 3.41
367 368 6.598064 ACTCCGTCCCAAAATTATTGTCTTAG 59.402 38.462 0.00 0.00 0.00 2.18
368 369 6.713276 TCCGTCCCAAAATTATTGTCTTAGA 58.287 36.000 0.00 0.00 0.00 2.10
369 370 7.343357 TCCGTCCCAAAATTATTGTCTTAGAT 58.657 34.615 0.00 0.00 0.00 1.98
370 371 7.832187 TCCGTCCCAAAATTATTGTCTTAGATT 59.168 33.333 0.00 0.00 0.00 2.40
371 372 8.129211 CCGTCCCAAAATTATTGTCTTAGATTC 58.871 37.037 0.00 0.00 0.00 2.52
372 373 7.850982 CGTCCCAAAATTATTGTCTTAGATTCG 59.149 37.037 0.00 0.00 0.00 3.34
374 375 8.889717 TCCCAAAATTATTGTCTTAGATTCGTC 58.110 33.333 0.00 0.00 0.00 4.20
375 376 8.893727 CCCAAAATTATTGTCTTAGATTCGTCT 58.106 33.333 0.00 0.00 0.00 4.18
383 384 6.782298 TGTCTTAGATTCGTCTAGATACGG 57.218 41.667 0.00 0.00 43.05 4.02
385 386 6.423302 TGTCTTAGATTCGTCTAGATACGGAC 59.577 42.308 0.00 0.00 43.05 4.79
387 388 7.118101 GTCTTAGATTCGTCTAGATACGGACAT 59.882 40.741 0.00 0.00 43.05 3.06
388 389 8.309656 TCTTAGATTCGTCTAGATACGGACATA 58.690 37.037 0.00 0.00 43.05 2.29
389 390 9.100554 CTTAGATTCGTCTAGATACGGACATAT 57.899 37.037 0.00 0.00 43.05 1.78
390 391 7.542534 AGATTCGTCTAGATACGGACATATC 57.457 40.000 0.00 0.00 43.05 1.63
405 406 8.251750 ACGGACATATCAAAAATGTATATCGG 57.748 34.615 0.00 0.00 37.69 4.18
415 416 5.618056 AAATGTATATCGGCTCATGCAAG 57.382 39.130 0.00 0.00 41.91 4.01
434 435 3.508845 AGTACAAGTGCATTGGTCCTT 57.491 42.857 0.00 0.00 43.68 3.36
464 465 3.825812 GCACACAGCTTACACACAC 57.174 52.632 0.00 0.00 41.15 3.82
472 473 5.575606 ACACAGCTTACACACACGTATAATC 59.424 40.000 0.00 0.00 0.00 1.75
486 487 7.428183 CACACGTATAATCAAAATGCAAGTACC 59.572 37.037 0.00 0.00 0.00 3.34
498 499 1.328680 GCAAGTACCAGTGCATCGATG 59.671 52.381 21.27 21.27 40.58 3.84
520 527 8.297426 CGATGTTAGGATCTTAGTACATGCTAA 58.703 37.037 6.85 0.00 32.34 3.09
574 581 7.928167 TGAGATGAATGATGGTTATGTCTGTAC 59.072 37.037 0.00 0.00 0.00 2.90
609 616 1.265095 CACCACATGACACACTGCTTC 59.735 52.381 0.00 0.00 0.00 3.86
625 632 1.739035 GCTTCGACGAATGATGGTGGA 60.739 52.381 11.30 0.00 0.00 4.02
627 634 0.179148 TCGACGAATGATGGTGGACG 60.179 55.000 0.00 0.00 0.00 4.79
628 635 1.752501 CGACGAATGATGGTGGACGC 61.753 60.000 0.00 0.00 0.00 5.19
631 638 1.715585 GAATGATGGTGGACGCGTG 59.284 57.895 20.70 0.00 0.00 5.34
635 642 0.816018 TGATGGTGGACGCGTGTTTT 60.816 50.000 20.70 0.00 0.00 2.43
637 644 2.353030 GGTGGACGCGTGTTTTGC 60.353 61.111 20.70 0.00 0.00 3.68
641 648 0.248296 TGGACGCGTGTTTTGCTTTC 60.248 50.000 20.70 0.00 0.00 2.62
644 651 2.008697 CGCGTGTTTTGCTTTCCCG 61.009 57.895 0.00 0.00 0.00 5.14
669 676 1.335496 ACCGAACAAACCAAACCGATG 59.665 47.619 0.00 0.00 0.00 3.84
670 677 1.404477 CGAACAAACCAAACCGATGC 58.596 50.000 0.00 0.00 0.00 3.91
698 705 4.142790 TGTTAATAAGGTTCGGTGGCAAA 58.857 39.130 0.00 0.00 0.00 3.68
706 713 5.986501 AGGTTCGGTGGCAAATTTTATTA 57.013 34.783 0.00 0.00 0.00 0.98
711 718 7.169140 GGTTCGGTGGCAAATTTTATTATGATC 59.831 37.037 0.00 0.00 0.00 2.92
729 736 5.926214 TGATCATTTCGGTCGTTGTTTTA 57.074 34.783 0.00 0.00 0.00 1.52
759 766 8.861033 AAACAAAACTCTAAAAACCCGAATAC 57.139 30.769 0.00 0.00 0.00 1.89
774 781 3.117507 CCGAATACGACGAAGCGAATTAG 59.882 47.826 0.00 0.00 42.66 1.73
781 788 3.181540 CGACGAAGCGAATTAGCCATATG 60.182 47.826 6.95 0.00 38.01 1.78
793 800 2.006888 AGCCATATGAACCGAACAACG 58.993 47.619 3.65 0.00 42.18 4.10
794 801 1.735571 GCCATATGAACCGAACAACGT 59.264 47.619 3.65 0.00 40.78 3.99
795 802 2.475519 GCCATATGAACCGAACAACGTG 60.476 50.000 3.65 0.00 40.78 4.49
796 803 2.095213 CCATATGAACCGAACAACGTGG 59.905 50.000 3.65 0.00 40.78 4.94
800 807 3.156157 AACCGAACAACGTGGTTCA 57.844 47.368 30.12 0.00 45.82 3.18
801 808 1.451067 AACCGAACAACGTGGTTCAA 58.549 45.000 30.12 0.00 45.82 2.69
802 809 1.670791 ACCGAACAACGTGGTTCAAT 58.329 45.000 30.12 17.42 45.82 2.57
803 810 2.018515 ACCGAACAACGTGGTTCAATT 58.981 42.857 30.12 14.14 45.82 2.32
804 811 3.204526 ACCGAACAACGTGGTTCAATTA 58.795 40.909 30.12 0.00 45.82 1.40
805 812 3.002553 ACCGAACAACGTGGTTCAATTAC 59.997 43.478 30.12 8.06 45.82 1.89
806 813 3.249080 CCGAACAACGTGGTTCAATTACT 59.751 43.478 30.12 0.00 45.82 2.24
807 814 4.451557 CGAACAACGTGGTTCAATTACTC 58.548 43.478 30.12 6.82 45.82 2.59
810 817 5.821516 ACAACGTGGTTCAATTACTCAAA 57.178 34.783 0.00 0.00 0.00 2.69
812 819 6.622549 ACAACGTGGTTCAATTACTCAAAAA 58.377 32.000 0.00 0.00 0.00 1.94
845 855 1.801025 CGTGGAGTTGGTTGCAAAACC 60.801 52.381 0.00 0.00 43.12 3.27
884 909 0.893727 ACCGCCACCAGAATTTCCAC 60.894 55.000 0.00 0.00 0.00 4.02
973 1007 0.025001 CACGAGTTAGCGGAATTGCG 59.975 55.000 15.68 15.68 40.67 4.85
1457 2081 4.876081 GCGGCTGATTGAAGCGCG 62.876 66.667 0.00 0.00 44.52 6.86
1477 2101 4.796231 CGGCCGTCGACAAGGAGG 62.796 72.222 19.50 9.22 42.43 4.30
1576 2200 4.681978 ACAGGCGACGGGAACAGC 62.682 66.667 0.00 0.00 0.00 4.40
1597 2221 3.744719 CGGCCGTCGACAAGGAGA 61.745 66.667 19.50 0.00 42.43 3.71
1598 2222 2.654877 GGCCGTCGACAAGGAGAA 59.345 61.111 17.16 0.00 0.00 2.87
1599 2223 1.737008 GGCCGTCGACAAGGAGAAC 60.737 63.158 17.16 0.00 0.00 3.01
1600 2224 1.006571 GCCGTCGACAAGGAGAACA 60.007 57.895 17.16 0.00 0.00 3.18
1601 2225 1.009389 GCCGTCGACAAGGAGAACAG 61.009 60.000 17.16 0.00 0.00 3.16
1604 2228 1.009389 GTCGACAAGGAGAACAGGCG 61.009 60.000 11.55 0.00 0.00 5.52
1605 2229 1.176619 TCGACAAGGAGAACAGGCGA 61.177 55.000 0.00 0.00 0.00 5.54
1606 2230 1.009389 CGACAAGGAGAACAGGCGAC 61.009 60.000 0.00 0.00 0.00 5.19
1607 2231 1.006102 ACAAGGAGAACAGGCGACG 60.006 57.895 0.00 0.00 0.00 5.12
1611 2235 2.654877 GAGAACAGGCGACGGGAA 59.345 61.111 0.00 0.00 0.00 3.97
1612 2236 1.737008 GAGAACAGGCGACGGGAAC 60.737 63.158 0.00 0.00 0.00 3.62
1613 2237 2.029964 GAACAGGCGACGGGAACA 59.970 61.111 0.00 0.00 0.00 3.18
1615 2239 4.681978 ACAGGCGACGGGAACAGC 62.682 66.667 0.00 0.00 0.00 4.40
1617 2241 4.379243 AGGCGACGGGAACAGCAG 62.379 66.667 0.00 0.00 0.00 4.24
1710 2519 3.576118 TCTTGGAGTTCTTGGAGTCTCTG 59.424 47.826 0.00 0.00 0.00 3.35
1711 2520 2.964209 TGGAGTTCTTGGAGTCTCTGT 58.036 47.619 0.00 0.00 0.00 3.41
1712 2521 2.894126 TGGAGTTCTTGGAGTCTCTGTC 59.106 50.000 0.00 0.00 0.00 3.51
1713 2522 3.161866 GGAGTTCTTGGAGTCTCTGTCT 58.838 50.000 0.00 0.00 0.00 3.41
2093 3022 6.042143 GGTTTGGTATGATAGCATGTTTTGG 58.958 40.000 3.11 0.00 35.91 3.28
2173 3114 5.664294 TGCTGTCATATTTTGGCAAGAAT 57.336 34.783 0.00 6.47 40.05 2.40
2202 3146 3.387374 TGCCAAAATGTGTCAGTTTCCAT 59.613 39.130 0.00 0.00 29.07 3.41
2256 3225 4.584874 TCTGAATGTTTGCTCGGGATTAA 58.415 39.130 0.00 0.00 0.00 1.40
2465 4201 2.951229 AGGTTGTGGTAAAGGTGAGG 57.049 50.000 0.00 0.00 0.00 3.86
2507 4276 3.669557 CGCAAGTAAAGGGGAAATCGTTG 60.670 47.826 0.00 0.00 0.00 4.10
2532 4301 2.299297 AGTCGGGTCAAGAACAAGGTAG 59.701 50.000 0.00 0.00 0.00 3.18
2637 5387 3.691609 GTGCATAGAAAGAAGAACCAGGG 59.308 47.826 0.00 0.00 0.00 4.45
2638 5388 3.282885 GCATAGAAAGAAGAACCAGGGG 58.717 50.000 0.00 0.00 0.00 4.79
2639 5389 3.308473 GCATAGAAAGAAGAACCAGGGGT 60.308 47.826 0.00 0.00 37.65 4.95
2641 5391 3.973472 AGAAAGAAGAACCAGGGGTTT 57.027 42.857 1.65 0.00 46.95 3.27
2642 5392 4.265856 AGAAAGAAGAACCAGGGGTTTT 57.734 40.909 1.65 0.00 46.95 2.43
2643 5393 4.620723 AGAAAGAAGAACCAGGGGTTTTT 58.379 39.130 1.65 2.83 46.95 1.94
2644 5394 4.405680 AGAAAGAAGAACCAGGGGTTTTTG 59.594 41.667 8.45 0.00 46.95 2.44
2645 5395 2.677914 AGAAGAACCAGGGGTTTTTGG 58.322 47.619 8.45 0.00 46.95 3.28
2712 5621 1.067565 AGTGATACGCGGCATCATAGG 60.068 52.381 23.04 0.00 35.02 2.57
2740 5649 5.826643 AGGAGTAATCTTGGGCAAATGTTA 58.173 37.500 0.00 0.00 0.00 2.41
3025 6034 7.559897 TCACTTTAGGATTTGGTGAGAAGTTTT 59.440 33.333 0.00 0.00 33.74 2.43
3027 6036 7.342026 ACTTTAGGATTTGGTGAGAAGTTTTGT 59.658 33.333 0.00 0.00 0.00 2.83
3036 6046 5.888724 TGGTGAGAAGTTTTGTCATTTGGTA 59.111 36.000 0.00 0.00 35.27 3.25
3066 6086 8.986991 AGTTGGTTCAGAAGTCTCAGAATATAT 58.013 33.333 0.00 0.00 30.70 0.86
3540 6673 8.480643 ACTATAAACTGTATGTTGACTCTTGC 57.519 34.615 0.00 0.00 39.13 4.01
3543 6676 5.931441 AACTGTATGTTGACTCTTGCTTC 57.069 39.130 0.00 0.00 37.52 3.86
3776 7506 5.240623 TCCATGTTCAACTCAGCGTAATTTT 59.759 36.000 0.00 0.00 0.00 1.82
4036 7773 7.064134 CGAATGTACAACAGGAGCAAGTTATTA 59.936 37.037 0.00 0.00 0.00 0.98
4346 8167 5.916318 TGTTGGCAGAAACTCAAATTTGAT 58.084 33.333 20.76 6.91 36.46 2.57
5478 9616 4.392940 CAACAGACTTCCCAGAGTTGAAT 58.607 43.478 0.00 0.00 38.80 2.57
5557 9745 6.880942 ATATCCGAGTTTAGTGGTAGAGAC 57.119 41.667 0.00 0.00 0.00 3.36
5607 9883 7.442666 ACTTGTGACTTCTTCTTTGATAGGAAC 59.557 37.037 0.00 0.00 0.00 3.62
5608 9884 5.926542 TGTGACTTCTTCTTTGATAGGAACG 59.073 40.000 0.00 0.00 0.00 3.95
5760 10259 4.964593 ACGTTAATAGTGTTGAGTTGGGT 58.035 39.130 0.00 0.00 0.00 4.51
5805 10304 9.757227 GAATACAGTAATGAAGCAGAGATACTT 57.243 33.333 0.00 0.00 0.00 2.24
5808 10307 7.493367 ACAGTAATGAAGCAGAGATACTTACC 58.507 38.462 0.00 0.00 0.00 2.85
5872 10412 1.734707 GCTGATGCCACTGTTGATTGC 60.735 52.381 0.00 0.00 0.00 3.56
5923 10463 4.627035 GTGCCAAGGATGAAATTAGTTTGC 59.373 41.667 0.00 0.00 0.00 3.68
5962 10502 7.027161 GGCAGTCGTTTGATTAATTTGTATGT 58.973 34.615 0.00 0.00 0.00 2.29
6021 10561 2.177016 TGTATCTCTGCTGGCTACCCTA 59.823 50.000 0.00 0.00 0.00 3.53
6033 10573 1.972660 CTACCCTACCCTGCCTGTGC 61.973 65.000 0.00 0.00 38.26 4.57
6135 10720 2.076863 CTGGCTGGTACTACTTTGCAC 58.923 52.381 0.00 0.00 0.00 4.57
6168 10753 1.145325 ACTACTCCCTCCGTCCCATAG 59.855 57.143 0.00 0.00 0.00 2.23
6169 10754 1.145325 CTACTCCCTCCGTCCCATAGT 59.855 57.143 0.00 0.00 0.00 2.12
6170 10755 0.397254 ACTCCCTCCGTCCCATAGTG 60.397 60.000 0.00 0.00 0.00 2.74
6171 10756 0.397254 CTCCCTCCGTCCCATAGTGT 60.397 60.000 0.00 0.00 0.00 3.55
6172 10757 0.928505 TCCCTCCGTCCCATAGTGTA 59.071 55.000 0.00 0.00 0.00 2.90
6173 10758 1.288633 TCCCTCCGTCCCATAGTGTAA 59.711 52.381 0.00 0.00 0.00 2.41
6174 10759 2.090943 TCCCTCCGTCCCATAGTGTAAT 60.091 50.000 0.00 0.00 0.00 1.89
6175 10760 3.140707 TCCCTCCGTCCCATAGTGTAATA 59.859 47.826 0.00 0.00 0.00 0.98
6176 10761 3.257624 CCCTCCGTCCCATAGTGTAATAC 59.742 52.174 0.00 0.00 0.00 1.89
6177 10762 3.057736 CCTCCGTCCCATAGTGTAATACG 60.058 52.174 0.00 0.00 0.00 3.06
6178 10763 3.554934 TCCGTCCCATAGTGTAATACGT 58.445 45.455 0.00 0.00 0.00 3.57
6179 10764 3.953612 TCCGTCCCATAGTGTAATACGTT 59.046 43.478 0.00 0.00 0.00 3.99
6180 10765 4.402155 TCCGTCCCATAGTGTAATACGTTT 59.598 41.667 0.00 0.00 0.00 3.60
6181 10766 5.105392 TCCGTCCCATAGTGTAATACGTTTT 60.105 40.000 0.00 0.00 0.00 2.43
6182 10767 5.581874 CCGTCCCATAGTGTAATACGTTTTT 59.418 40.000 0.00 0.00 0.00 1.94
6271 10856 3.892588 GGGACAGAGGGAGTATGAGTTAG 59.107 52.174 0.00 0.00 0.00 2.34
6296 10886 7.707893 AGAACAACTTGATTTTTGTTGAGGATG 59.292 33.333 11.30 0.00 44.16 3.51
6309 10899 9.495572 TTTTGTTGAGGATGTTAAAACAACTTT 57.504 25.926 0.00 0.00 43.03 2.66
6310 10900 8.696410 TTGTTGAGGATGTTAAAACAACTTTC 57.304 30.769 0.00 1.61 43.03 2.62
6334 10924 6.487668 TCTGTACCAATTGATTCAGGCATATG 59.512 38.462 7.12 0.00 0.00 1.78
6415 11006 3.379372 CCAGCTCTGGGTAATGTTCAATG 59.621 47.826 8.03 0.00 46.81 2.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 6.217294 AGTACTTTTGAGCTAGACTGTTGTC 58.783 40.000 0.00 0.00 43.22 3.18
12 13 6.163135 AGTACTTTTGAGCTAGACTGTTGT 57.837 37.500 0.00 0.00 0.00 3.32
13 14 7.371936 ACTAGTACTTTTGAGCTAGACTGTTG 58.628 38.462 0.00 0.00 35.96 3.33
14 15 7.527568 ACTAGTACTTTTGAGCTAGACTGTT 57.472 36.000 0.00 0.00 35.96 3.16
15 16 7.884354 AGTACTAGTACTTTTGAGCTAGACTGT 59.116 37.037 26.61 2.16 43.35 3.55
16 17 8.178964 CAGTACTAGTACTTTTGAGCTAGACTG 58.821 40.741 29.08 14.03 43.35 3.51
17 18 7.337436 CCAGTACTAGTACTTTTGAGCTAGACT 59.663 40.741 29.08 6.12 43.35 3.24
18 19 7.474190 CCAGTACTAGTACTTTTGAGCTAGAC 58.526 42.308 29.08 3.84 43.35 2.59
19 20 6.095160 GCCAGTACTAGTACTTTTGAGCTAGA 59.905 42.308 29.08 0.00 43.35 2.43
20 21 6.267070 GCCAGTACTAGTACTTTTGAGCTAG 58.733 44.000 29.08 15.98 43.35 3.42
22 23 4.081586 GGCCAGTACTAGTACTTTTGAGCT 60.082 45.833 29.08 7.04 43.35 4.09
24 25 4.157289 TCGGCCAGTACTAGTACTTTTGAG 59.843 45.833 29.08 18.47 43.35 3.02
25 26 4.081406 TCGGCCAGTACTAGTACTTTTGA 58.919 43.478 29.08 21.03 43.35 2.69
26 27 4.445452 TCGGCCAGTACTAGTACTTTTG 57.555 45.455 29.08 21.15 43.35 2.44
27 28 5.473066 TTTCGGCCAGTACTAGTACTTTT 57.527 39.130 29.08 9.86 43.35 2.27
30 31 3.828451 TGTTTTCGGCCAGTACTAGTACT 59.172 43.478 26.61 26.61 46.52 2.73
31 32 4.178545 TGTTTTCGGCCAGTACTAGTAC 57.821 45.455 23.03 23.03 36.35 2.73
34 35 3.617263 GTCATGTTTTCGGCCAGTACTAG 59.383 47.826 2.24 0.00 0.00 2.57
40 41 0.240945 GTGGTCATGTTTTCGGCCAG 59.759 55.000 2.24 0.00 0.00 4.85
41 42 0.179004 AGTGGTCATGTTTTCGGCCA 60.179 50.000 2.24 0.00 0.00 5.36
42 43 0.240945 CAGTGGTCATGTTTTCGGCC 59.759 55.000 0.00 0.00 0.00 6.13
43 44 1.234821 TCAGTGGTCATGTTTTCGGC 58.765 50.000 0.00 0.00 0.00 5.54
45 46 4.811555 TTCTTCAGTGGTCATGTTTTCG 57.188 40.909 0.00 0.00 0.00 3.46
49 50 4.473444 ACCAATTCTTCAGTGGTCATGTT 58.527 39.130 0.00 0.00 42.00 2.71
50 51 4.104383 ACCAATTCTTCAGTGGTCATGT 57.896 40.909 0.00 0.00 42.00 3.21
70 71 6.759497 AATGGCTGTAATTAGGTTTCTGAC 57.241 37.500 0.00 0.00 0.00 3.51
71 72 6.537301 CGTAATGGCTGTAATTAGGTTTCTGA 59.463 38.462 0.00 0.00 0.00 3.27
72 73 6.315393 ACGTAATGGCTGTAATTAGGTTTCTG 59.685 38.462 0.00 0.00 35.95 3.02
73 74 6.315393 CACGTAATGGCTGTAATTAGGTTTCT 59.685 38.462 0.00 0.00 36.80 2.52
74 75 6.093082 ACACGTAATGGCTGTAATTAGGTTTC 59.907 38.462 0.00 0.00 36.80 2.78
75 76 5.941647 ACACGTAATGGCTGTAATTAGGTTT 59.058 36.000 0.00 0.00 36.80 3.27
77 78 5.093849 ACACGTAATGGCTGTAATTAGGT 57.906 39.130 0.00 0.00 38.48 3.08
78 79 5.353123 ACAACACGTAATGGCTGTAATTAGG 59.647 40.000 4.95 0.00 33.61 2.69
79 80 6.247903 CACAACACGTAATGGCTGTAATTAG 58.752 40.000 4.95 0.00 29.80 1.73
81 82 4.614993 GCACAACACGTAATGGCTGTAATT 60.615 41.667 4.95 0.00 29.80 1.40
83 84 2.224549 GCACAACACGTAATGGCTGTAA 59.775 45.455 4.95 0.00 29.80 2.41
84 85 1.801771 GCACAACACGTAATGGCTGTA 59.198 47.619 4.95 0.00 29.80 2.74
85 86 0.591170 GCACAACACGTAATGGCTGT 59.409 50.000 4.95 0.00 0.00 4.40
86 87 0.590682 TGCACAACACGTAATGGCTG 59.409 50.000 4.95 0.00 0.00 4.85
87 88 1.533625 ATGCACAACACGTAATGGCT 58.466 45.000 0.00 0.00 0.00 4.75
88 89 2.791158 GCTATGCACAACACGTAATGGC 60.791 50.000 0.00 5.77 0.00 4.40
89 90 2.418280 TGCTATGCACAACACGTAATGG 59.582 45.455 0.00 0.00 31.71 3.16
91 92 4.757799 TTTGCTATGCACAACACGTAAT 57.242 36.364 0.00 0.00 38.71 1.89
93 94 5.864628 TTATTTGCTATGCACAACACGTA 57.135 34.783 0.00 0.00 38.71 3.57
95 96 5.331098 TCATTATTTGCTATGCACAACACG 58.669 37.500 0.00 0.00 38.71 4.49
96 97 8.854979 TTATCATTATTTGCTATGCACAACAC 57.145 30.769 0.00 0.00 38.71 3.32
97 98 9.299963 GTTTATCATTATTTGCTATGCACAACA 57.700 29.630 0.00 0.00 38.71 3.33
98 99 9.299963 TGTTTATCATTATTTGCTATGCACAAC 57.700 29.630 0.00 0.00 38.71 3.32
100 101 7.920151 GGTGTTTATCATTATTTGCTATGCACA 59.080 33.333 0.00 0.00 38.71 4.57
101 102 8.137437 AGGTGTTTATCATTATTTGCTATGCAC 58.863 33.333 0.00 0.00 38.71 4.57
103 104 9.612620 GTAGGTGTTTATCATTATTTGCTATGC 57.387 33.333 0.00 0.00 0.00 3.14
106 107 9.688091 TTGGTAGGTGTTTATCATTATTTGCTA 57.312 29.630 0.00 0.00 0.00 3.49
107 108 8.588290 TTGGTAGGTGTTTATCATTATTTGCT 57.412 30.769 0.00 0.00 0.00 3.91
108 109 9.083080 GTTTGGTAGGTGTTTATCATTATTTGC 57.917 33.333 0.00 0.00 0.00 3.68
112 113 8.836413 CGATGTTTGGTAGGTGTTTATCATTAT 58.164 33.333 0.00 0.00 0.00 1.28
114 115 6.882140 TCGATGTTTGGTAGGTGTTTATCATT 59.118 34.615 0.00 0.00 0.00 2.57
115 116 6.411376 TCGATGTTTGGTAGGTGTTTATCAT 58.589 36.000 0.00 0.00 0.00 2.45
116 117 5.795972 TCGATGTTTGGTAGGTGTTTATCA 58.204 37.500 0.00 0.00 0.00 2.15
118 119 6.404293 GCATTCGATGTTTGGTAGGTGTTTAT 60.404 38.462 0.00 0.00 0.00 1.40
120 121 4.320935 GCATTCGATGTTTGGTAGGTGTTT 60.321 41.667 0.00 0.00 0.00 2.83
121 122 3.190535 GCATTCGATGTTTGGTAGGTGTT 59.809 43.478 0.00 0.00 0.00 3.32
122 123 2.747446 GCATTCGATGTTTGGTAGGTGT 59.253 45.455 0.00 0.00 0.00 4.16
123 124 2.746904 TGCATTCGATGTTTGGTAGGTG 59.253 45.455 0.00 0.00 0.00 4.00
124 125 3.066291 TGCATTCGATGTTTGGTAGGT 57.934 42.857 0.00 0.00 0.00 3.08
125 126 4.574421 TGTATGCATTCGATGTTTGGTAGG 59.426 41.667 3.54 0.00 0.00 3.18
127 128 5.423886 TCTGTATGCATTCGATGTTTGGTA 58.576 37.500 3.54 0.00 0.00 3.25
129 130 4.880886 TCTGTATGCATTCGATGTTTGG 57.119 40.909 3.54 0.00 0.00 3.28
130 131 6.488817 TGAATCTGTATGCATTCGATGTTTG 58.511 36.000 3.54 0.00 32.49 2.93
131 132 6.682423 TGAATCTGTATGCATTCGATGTTT 57.318 33.333 3.54 0.00 32.49 2.83
132 133 6.872628 ATGAATCTGTATGCATTCGATGTT 57.127 33.333 3.54 0.00 32.49 2.71
134 135 9.667989 TTTTAATGAATCTGTATGCATTCGATG 57.332 29.630 3.54 0.00 40.08 3.84
136 137 9.108284 TCTTTTAATGAATCTGTATGCATTCGA 57.892 29.630 3.54 2.37 40.08 3.71
137 138 9.888878 ATCTTTTAATGAATCTGTATGCATTCG 57.111 29.630 3.54 0.00 40.08 3.34
152 153 8.240682 CGTGGGTCAATGTTTATCTTTTAATGA 58.759 33.333 0.00 0.00 0.00 2.57
153 154 8.240682 TCGTGGGTCAATGTTTATCTTTTAATG 58.759 33.333 0.00 0.00 0.00 1.90
154 155 8.343168 TCGTGGGTCAATGTTTATCTTTTAAT 57.657 30.769 0.00 0.00 0.00 1.40
155 156 7.747155 TCGTGGGTCAATGTTTATCTTTTAA 57.253 32.000 0.00 0.00 0.00 1.52
157 158 6.642707 TTCGTGGGTCAATGTTTATCTTTT 57.357 33.333 0.00 0.00 0.00 2.27
159 160 6.127730 GGATTTCGTGGGTCAATGTTTATCTT 60.128 38.462 0.00 0.00 0.00 2.40
160 161 5.357032 GGATTTCGTGGGTCAATGTTTATCT 59.643 40.000 0.00 0.00 0.00 1.98
161 162 5.449999 GGGATTTCGTGGGTCAATGTTTATC 60.450 44.000 0.00 0.00 0.00 1.75
162 163 4.401202 GGGATTTCGTGGGTCAATGTTTAT 59.599 41.667 0.00 0.00 0.00 1.40
164 165 2.560981 GGGATTTCGTGGGTCAATGTTT 59.439 45.455 0.00 0.00 0.00 2.83
165 166 2.167662 GGGATTTCGTGGGTCAATGTT 58.832 47.619 0.00 0.00 0.00 2.71
167 168 0.732571 CGGGATTTCGTGGGTCAATG 59.267 55.000 0.00 0.00 0.00 2.82
177 178 2.034685 TCAGCTATCTCACGGGATTTCG 59.965 50.000 0.00 0.00 0.00 3.46
178 179 3.385577 GTCAGCTATCTCACGGGATTTC 58.614 50.000 0.00 0.00 0.00 2.17
179 180 2.223829 CGTCAGCTATCTCACGGGATTT 60.224 50.000 0.00 0.00 0.00 2.17
180 181 1.338337 CGTCAGCTATCTCACGGGATT 59.662 52.381 0.00 0.00 0.00 3.01
181 182 0.955178 CGTCAGCTATCTCACGGGAT 59.045 55.000 0.00 0.00 0.00 3.85
182 183 0.107361 TCGTCAGCTATCTCACGGGA 60.107 55.000 0.00 0.00 33.02 5.14
183 184 0.029567 GTCGTCAGCTATCTCACGGG 59.970 60.000 0.00 0.00 33.02 5.28
184 185 0.733150 TGTCGTCAGCTATCTCACGG 59.267 55.000 0.00 0.00 33.02 4.94
185 186 1.130561 TGTGTCGTCAGCTATCTCACG 59.869 52.381 0.00 0.00 0.00 4.35
188 189 3.304391 GGAGATGTGTCGTCAGCTATCTC 60.304 52.174 16.16 16.16 36.76 2.75
189 190 2.621055 GGAGATGTGTCGTCAGCTATCT 59.379 50.000 0.00 4.50 34.10 1.98
190 191 2.359214 TGGAGATGTGTCGTCAGCTATC 59.641 50.000 0.00 0.00 34.10 2.08
191 192 2.379005 TGGAGATGTGTCGTCAGCTAT 58.621 47.619 0.00 0.00 34.10 2.97
192 193 1.834188 TGGAGATGTGTCGTCAGCTA 58.166 50.000 0.00 0.00 34.10 3.32
193 194 0.969149 TTGGAGATGTGTCGTCAGCT 59.031 50.000 0.00 0.00 36.75 4.24
194 195 1.461127 GTTTGGAGATGTGTCGTCAGC 59.539 52.381 0.00 0.00 0.00 4.26
195 196 1.721389 CGTTTGGAGATGTGTCGTCAG 59.279 52.381 0.00 0.00 0.00 3.51
196 197 1.778334 CGTTTGGAGATGTGTCGTCA 58.222 50.000 0.00 0.00 0.00 4.35
197 198 0.438830 GCGTTTGGAGATGTGTCGTC 59.561 55.000 0.00 0.00 0.00 4.20
198 199 0.949105 GGCGTTTGGAGATGTGTCGT 60.949 55.000 0.00 0.00 0.00 4.34
200 201 0.321653 AGGGCGTTTGGAGATGTGTC 60.322 55.000 0.00 0.00 0.00 3.67
202 203 1.026718 GGAGGGCGTTTGGAGATGTG 61.027 60.000 0.00 0.00 0.00 3.21
203 204 1.299976 GGAGGGCGTTTGGAGATGT 59.700 57.895 0.00 0.00 0.00 3.06
204 205 0.322456 TTGGAGGGCGTTTGGAGATG 60.322 55.000 0.00 0.00 0.00 2.90
205 206 0.322546 GTTGGAGGGCGTTTGGAGAT 60.323 55.000 0.00 0.00 0.00 2.75
206 207 1.072505 GTTGGAGGGCGTTTGGAGA 59.927 57.895 0.00 0.00 0.00 3.71
207 208 2.325082 CGTTGGAGGGCGTTTGGAG 61.325 63.158 0.00 0.00 0.00 3.86
210 211 1.501741 CATCGTTGGAGGGCGTTTG 59.498 57.895 0.00 0.00 0.00 2.93
211 212 1.674322 CCATCGTTGGAGGGCGTTT 60.674 57.895 6.68 0.00 46.92 3.60
212 213 2.046314 CCATCGTTGGAGGGCGTT 60.046 61.111 6.68 0.00 46.92 4.84
217 218 0.815734 ACGTCTACCATCGTTGGAGG 59.184 55.000 19.34 10.56 46.92 4.30
218 219 3.119743 TGTTACGTCTACCATCGTTGGAG 60.120 47.826 19.34 11.52 46.92 3.86
219 220 2.819019 TGTTACGTCTACCATCGTTGGA 59.181 45.455 19.34 2.43 46.92 3.53
221 222 3.829948 AGTGTTACGTCTACCATCGTTG 58.170 45.455 0.00 0.00 40.70 4.10
222 223 4.095483 CCTAGTGTTACGTCTACCATCGTT 59.905 45.833 0.00 0.00 40.70 3.85
223 224 3.624861 CCTAGTGTTACGTCTACCATCGT 59.375 47.826 0.00 0.00 42.82 3.73
224 225 3.873361 TCCTAGTGTTACGTCTACCATCG 59.127 47.826 0.00 0.00 0.00 3.84
225 226 7.308469 CCTTATCCTAGTGTTACGTCTACCATC 60.308 44.444 0.00 0.00 0.00 3.51
229 230 5.530543 AGCCTTATCCTAGTGTTACGTCTAC 59.469 44.000 0.00 0.00 0.00 2.59
233 234 4.826183 CCTAGCCTTATCCTAGTGTTACGT 59.174 45.833 0.00 0.00 32.29 3.57
234 235 4.826183 ACCTAGCCTTATCCTAGTGTTACG 59.174 45.833 0.00 0.00 32.29 3.18
235 236 5.832060 TCACCTAGCCTTATCCTAGTGTTAC 59.168 44.000 0.00 0.00 32.29 2.50
236 237 6.022107 TCACCTAGCCTTATCCTAGTGTTA 57.978 41.667 0.00 0.00 32.29 2.41
237 238 4.880164 TCACCTAGCCTTATCCTAGTGTT 58.120 43.478 0.00 0.00 32.29 3.32
238 239 4.537945 TCACCTAGCCTTATCCTAGTGT 57.462 45.455 0.00 0.00 32.29 3.55
239 240 5.871396 TTTCACCTAGCCTTATCCTAGTG 57.129 43.478 0.00 0.00 32.29 2.74
240 241 6.203072 TCTTTTCACCTAGCCTTATCCTAGT 58.797 40.000 0.00 0.00 32.29 2.57
241 242 6.732896 TCTTTTCACCTAGCCTTATCCTAG 57.267 41.667 0.00 0.00 33.64 3.02
242 243 6.406624 CGTTCTTTTCACCTAGCCTTATCCTA 60.407 42.308 0.00 0.00 0.00 2.94
244 245 4.571176 CGTTCTTTTCACCTAGCCTTATCC 59.429 45.833 0.00 0.00 0.00 2.59
245 246 5.176592 ACGTTCTTTTCACCTAGCCTTATC 58.823 41.667 0.00 0.00 0.00 1.75
246 247 5.161943 ACGTTCTTTTCACCTAGCCTTAT 57.838 39.130 0.00 0.00 0.00 1.73
248 249 3.487120 ACGTTCTTTTCACCTAGCCTT 57.513 42.857 0.00 0.00 0.00 4.35
249 250 3.487120 AACGTTCTTTTCACCTAGCCT 57.513 42.857 0.00 0.00 0.00 4.58
250 251 4.313282 AGTAACGTTCTTTTCACCTAGCC 58.687 43.478 2.82 0.00 0.00 3.93
251 252 4.388165 GGAGTAACGTTCTTTTCACCTAGC 59.612 45.833 2.82 0.00 0.00 3.42
252 253 5.535333 TGGAGTAACGTTCTTTTCACCTAG 58.465 41.667 2.82 0.00 0.00 3.02
253 254 5.534207 TGGAGTAACGTTCTTTTCACCTA 57.466 39.130 2.82 0.00 0.00 3.08
255 256 4.995487 AGATGGAGTAACGTTCTTTTCACC 59.005 41.667 2.82 1.02 0.00 4.02
263 264 5.688176 GCTCTATGAAGATGGAGTAACGTTC 59.312 44.000 2.82 0.00 38.99 3.95
265 266 4.890581 AGCTCTATGAAGATGGAGTAACGT 59.109 41.667 0.00 0.00 38.99 3.99
266 267 5.218885 CAGCTCTATGAAGATGGAGTAACG 58.781 45.833 0.00 0.00 38.99 3.18
270 271 2.368221 GGCAGCTCTATGAAGATGGAGT 59.632 50.000 0.00 0.00 38.99 3.85
271 272 2.367894 TGGCAGCTCTATGAAGATGGAG 59.632 50.000 0.00 0.00 39.60 3.86
273 274 2.492012 GTGGCAGCTCTATGAAGATGG 58.508 52.381 0.00 0.00 33.29 3.51
275 276 1.069823 CGGTGGCAGCTCTATGAAGAT 59.930 52.381 15.48 0.00 0.00 2.40
276 277 0.461548 CGGTGGCAGCTCTATGAAGA 59.538 55.000 15.48 0.00 0.00 2.87
277 278 0.531532 CCGGTGGCAGCTCTATGAAG 60.532 60.000 15.48 0.00 0.00 3.02
278 279 1.522092 CCGGTGGCAGCTCTATGAA 59.478 57.895 15.48 0.00 0.00 2.57
293 294 2.046700 TTTAGGAACGCCAGCCGG 60.047 61.111 0.00 0.00 42.52 6.13
294 295 1.024579 ATGTTTAGGAACGCCAGCCG 61.025 55.000 0.00 0.00 44.21 5.52
295 296 0.451783 CATGTTTAGGAACGCCAGCC 59.548 55.000 0.00 0.00 38.65 4.85
296 297 1.448985 TCATGTTTAGGAACGCCAGC 58.551 50.000 0.00 0.00 38.65 4.85
297 298 4.188462 TGTATCATGTTTAGGAACGCCAG 58.812 43.478 0.00 0.00 38.65 4.85
298 299 4.209307 TGTATCATGTTTAGGAACGCCA 57.791 40.909 0.00 0.00 38.65 5.69
299 300 5.277828 GGAATGTATCATGTTTAGGAACGCC 60.278 44.000 0.00 0.00 38.65 5.68
300 301 5.277828 GGGAATGTATCATGTTTAGGAACGC 60.278 44.000 0.00 0.00 38.65 4.84
301 302 6.055588 AGGGAATGTATCATGTTTAGGAACG 58.944 40.000 0.00 0.00 38.65 3.95
302 303 8.974060 TTAGGGAATGTATCATGTTTAGGAAC 57.026 34.615 0.00 0.00 36.29 3.62
303 304 7.719633 GCTTAGGGAATGTATCATGTTTAGGAA 59.280 37.037 0.00 0.00 0.00 3.36
304 305 7.147391 TGCTTAGGGAATGTATCATGTTTAGGA 60.147 37.037 0.00 0.00 0.00 2.94
305 306 6.998074 TGCTTAGGGAATGTATCATGTTTAGG 59.002 38.462 0.00 0.00 0.00 2.69
307 308 8.682710 GTTTGCTTAGGGAATGTATCATGTTTA 58.317 33.333 0.00 0.00 0.00 2.01
309 310 6.891908 AGTTTGCTTAGGGAATGTATCATGTT 59.108 34.615 0.00 0.00 0.00 2.71
310 311 6.426587 AGTTTGCTTAGGGAATGTATCATGT 58.573 36.000 0.00 0.00 0.00 3.21
311 312 6.949352 AGTTTGCTTAGGGAATGTATCATG 57.051 37.500 0.00 0.00 0.00 3.07
312 313 9.474313 TTTTAGTTTGCTTAGGGAATGTATCAT 57.526 29.630 0.00 0.00 0.00 2.45
313 314 8.871629 TTTTAGTTTGCTTAGGGAATGTATCA 57.128 30.769 0.00 0.00 0.00 2.15
343 344 5.897377 AAGACAATAATTTTGGGACGGAG 57.103 39.130 0.00 0.00 0.00 4.63
346 347 7.850982 CGAATCTAAGACAATAATTTTGGGACG 59.149 37.037 0.00 0.00 0.00 4.79
347 348 8.674607 ACGAATCTAAGACAATAATTTTGGGAC 58.325 33.333 0.00 0.00 0.00 4.46
348 349 8.801882 ACGAATCTAAGACAATAATTTTGGGA 57.198 30.769 0.00 0.00 0.00 4.37
349 350 8.893727 AGACGAATCTAAGACAATAATTTTGGG 58.106 33.333 0.00 0.00 31.46 4.12
357 358 8.933807 CCGTATCTAGACGAATCTAAGACAATA 58.066 37.037 5.60 0.00 45.82 1.90
359 360 6.988580 TCCGTATCTAGACGAATCTAAGACAA 59.011 38.462 5.60 0.00 45.82 3.18
361 362 6.423302 TGTCCGTATCTAGACGAATCTAAGAC 59.577 42.308 5.60 3.76 45.82 3.01
363 364 6.782298 TGTCCGTATCTAGACGAATCTAAG 57.218 41.667 5.60 0.00 45.82 2.18
364 365 9.096160 GATATGTCCGTATCTAGACGAATCTAA 57.904 37.037 5.60 0.00 45.82 2.10
367 368 7.304919 TGATATGTCCGTATCTAGACGAATC 57.695 40.000 5.60 0.00 45.82 2.52
368 369 7.683437 TTGATATGTCCGTATCTAGACGAAT 57.317 36.000 5.60 0.44 45.82 3.34
369 370 7.500720 TTTGATATGTCCGTATCTAGACGAA 57.499 36.000 5.60 0.00 45.82 3.85
370 371 7.500720 TTTTGATATGTCCGTATCTAGACGA 57.499 36.000 5.60 0.00 45.82 4.20
371 372 8.639428 CATTTTTGATATGTCCGTATCTAGACG 58.361 37.037 0.00 0.00 42.55 4.18
372 373 9.477484 ACATTTTTGATATGTCCGTATCTAGAC 57.523 33.333 0.00 0.00 30.65 2.59
379 380 9.361315 CCGATATACATTTTTGATATGTCCGTA 57.639 33.333 0.00 0.00 37.42 4.02
380 381 7.148474 GCCGATATACATTTTTGATATGTCCGT 60.148 37.037 0.00 0.00 37.42 4.69
381 382 7.064609 AGCCGATATACATTTTTGATATGTCCG 59.935 37.037 0.00 0.00 37.42 4.79
382 383 8.268850 AGCCGATATACATTTTTGATATGTCC 57.731 34.615 0.00 0.00 37.42 4.02
383 384 8.935844 TGAGCCGATATACATTTTTGATATGTC 58.064 33.333 0.00 0.00 37.42 3.06
385 386 9.712359 CATGAGCCGATATACATTTTTGATATG 57.288 33.333 0.00 0.00 0.00 1.78
387 388 7.390162 TGCATGAGCCGATATACATTTTTGATA 59.610 33.333 0.00 0.00 41.13 2.15
388 389 6.207221 TGCATGAGCCGATATACATTTTTGAT 59.793 34.615 0.00 0.00 41.13 2.57
389 390 5.530543 TGCATGAGCCGATATACATTTTTGA 59.469 36.000 0.00 0.00 41.13 2.69
390 391 5.761003 TGCATGAGCCGATATACATTTTTG 58.239 37.500 0.00 0.00 41.13 2.44
403 404 1.129251 CACTTGTACTTGCATGAGCCG 59.871 52.381 6.60 0.00 41.13 5.52
405 406 1.536766 TGCACTTGTACTTGCATGAGC 59.463 47.619 6.60 0.00 43.79 4.26
415 416 6.995511 TTATAAGGACCAATGCACTTGTAC 57.004 37.500 0.00 0.00 32.61 2.90
451 452 6.641176 TTGATTATACGTGTGTGTAAGCTG 57.359 37.500 0.00 0.00 38.44 4.24
464 465 7.639850 CACTGGTACTTGCATTTTGATTATACG 59.360 37.037 0.00 0.00 0.00 3.06
472 473 3.367992 TGCACTGGTACTTGCATTTTG 57.632 42.857 11.68 0.00 41.69 2.44
486 487 3.987547 AGATCCTAACATCGATGCACTG 58.012 45.455 25.11 11.69 0.00 3.66
547 554 7.341030 ACAGACATAACCATCATTCATCTCAA 58.659 34.615 0.00 0.00 0.00 3.02
574 581 8.296000 TGTCATGTGGTGATTTGTTATACTTTG 58.704 33.333 0.00 0.00 39.48 2.77
590 597 1.597742 GAAGCAGTGTGTCATGTGGT 58.402 50.000 0.00 0.00 0.00 4.16
609 616 1.752501 GCGTCCACCATCATTCGTCG 61.753 60.000 0.00 0.00 0.00 5.12
625 632 1.065109 GGGAAAGCAAAACACGCGT 59.935 52.632 5.58 5.58 0.00 6.01
627 634 1.660264 CCGGGAAAGCAAAACACGC 60.660 57.895 0.00 0.00 0.00 5.34
628 635 0.101579 AACCGGGAAAGCAAAACACG 59.898 50.000 6.32 0.00 0.00 4.49
631 638 2.746269 GGTTAACCGGGAAAGCAAAAC 58.254 47.619 9.34 0.00 0.00 2.43
644 651 3.446799 GGTTTGGTTTGTTCGGTTAACC 58.553 45.455 15.13 15.13 41.32 2.85
669 676 6.090223 CCACCGAACCTTATTAACAAAAATGC 59.910 38.462 0.00 0.00 0.00 3.56
670 677 6.090223 GCCACCGAACCTTATTAACAAAAATG 59.910 38.462 0.00 0.00 0.00 2.32
698 705 9.663904 CAACGACCGAAATGATCATAATAAAAT 57.336 29.630 9.04 0.00 0.00 1.82
706 713 5.371115 AAAACAACGACCGAAATGATCAT 57.629 34.783 1.18 1.18 0.00 2.45
711 718 4.024725 TCCTGTAAAACAACGACCGAAATG 60.025 41.667 0.00 0.00 0.00 2.32
717 724 4.619437 TGTTTCCTGTAAAACAACGACC 57.381 40.909 0.01 0.00 44.02 4.79
729 736 6.626402 CGGGTTTTTAGAGTTTTGTTTCCTGT 60.626 38.462 0.00 0.00 0.00 4.00
759 766 1.209128 ATGGCTAATTCGCTTCGTCG 58.791 50.000 1.63 0.00 0.00 5.12
774 781 1.735571 ACGTTGTTCGGTTCATATGGC 59.264 47.619 2.13 0.00 44.69 4.40
781 788 1.008329 TGAACCACGTTGTTCGGTTC 58.992 50.000 22.88 22.28 46.04 3.62
845 855 1.774894 TTGGTCCCTTGGGAGTTCCG 61.775 60.000 8.93 0.00 38.76 4.30
884 909 5.007724 GGAGAAGGTTTGACGGCTATTTATG 59.992 44.000 0.00 0.00 0.00 1.90
1192 1335 2.679342 CGATCCCCTTGCCCTTCCA 61.679 63.158 0.00 0.00 0.00 3.53
1258 1608 3.453679 GCCGAAGTCGAGGGAGCT 61.454 66.667 1.43 0.00 43.02 4.09
1259 1609 4.856607 CGCCGAAGTCGAGGGAGC 62.857 72.222 1.43 0.00 43.02 4.70
1260 1610 4.856607 GCGCCGAAGTCGAGGGAG 62.857 72.222 0.00 0.00 43.02 4.30
1432 2056 2.595124 TCAATCAGCCGCTCGATAAA 57.405 45.000 0.00 0.00 0.00 1.40
1477 2101 2.741211 GTTGGGGTCGAACGGCTC 60.741 66.667 0.00 0.00 0.00 4.70
1583 2207 0.388649 CCTGTTCTCCTTGTCGACGG 60.389 60.000 11.62 7.13 0.00 4.79
1584 2208 1.009389 GCCTGTTCTCCTTGTCGACG 61.009 60.000 11.62 0.00 0.00 5.12
1585 2209 1.009389 CGCCTGTTCTCCTTGTCGAC 61.009 60.000 9.11 9.11 0.00 4.20
1586 2210 1.176619 TCGCCTGTTCTCCTTGTCGA 61.177 55.000 0.00 0.00 0.00 4.20
1591 2215 2.657237 CCGTCGCCTGTTCTCCTT 59.343 61.111 0.00 0.00 0.00 3.36
1595 2219 2.342648 GTTCCCGTCGCCTGTTCT 59.657 61.111 0.00 0.00 0.00 3.01
1597 2221 2.030562 CTGTTCCCGTCGCCTGTT 59.969 61.111 0.00 0.00 0.00 3.16
1598 2222 4.681978 GCTGTTCCCGTCGCCTGT 62.682 66.667 0.00 0.00 0.00 4.00
1599 2223 4.680237 TGCTGTTCCCGTCGCCTG 62.680 66.667 0.00 0.00 0.00 4.85
1600 2224 4.379243 CTGCTGTTCCCGTCGCCT 62.379 66.667 0.00 0.00 0.00 5.52
1629 2373 4.227134 CATCGCCTGGTCCCCTCG 62.227 72.222 0.00 0.00 0.00 4.63
1710 2519 1.000163 TCAAGAACGCACTCCAGAGAC 60.000 52.381 0.70 0.00 0.00 3.36
1711 2520 1.270826 CTCAAGAACGCACTCCAGAGA 59.729 52.381 0.70 0.00 0.00 3.10
1712 2521 1.707632 CTCAAGAACGCACTCCAGAG 58.292 55.000 0.00 0.00 0.00 3.35
1713 2522 0.319900 GCTCAAGAACGCACTCCAGA 60.320 55.000 0.00 0.00 0.00 3.86
1907 2812 1.000843 GCCAAACTGTCCCCAACATTC 59.999 52.381 0.00 0.00 37.23 2.67
2093 3022 5.063817 ACATTTTTCACTTGCAGCAAAAGTC 59.936 36.000 9.65 0.00 35.70 3.01
2173 3114 4.341806 ACTGACACATTTTGGCATCAAGAA 59.658 37.500 0.00 0.00 44.75 2.52
2202 3146 6.617784 TCCCCTATAACACCATTCATCTACAA 59.382 38.462 0.00 0.00 0.00 2.41
2256 3225 2.435805 AGATGATGTACGTCTGGCCAAT 59.564 45.455 15.91 0.00 42.52 3.16
2465 4201 0.881796 GTAGTTTGTCCTGCTTGGGC 59.118 55.000 0.00 0.00 41.87 5.36
2507 4276 0.391597 TGTTCTTGACCCGACTCCAC 59.608 55.000 0.00 0.00 0.00 4.02
2532 4301 0.329596 AGTGGACAAGATTCAGGCCC 59.670 55.000 0.00 0.00 0.00 5.80
2637 5387 5.844004 ACCAAAAACCAAAAACCAAAAACC 58.156 33.333 0.00 0.00 0.00 3.27
2638 5388 7.707035 AGAAACCAAAAACCAAAAACCAAAAAC 59.293 29.630 0.00 0.00 0.00 2.43
2639 5389 7.706607 CAGAAACCAAAAACCAAAAACCAAAAA 59.293 29.630 0.00 0.00 0.00 1.94
2640 5390 7.147897 ACAGAAACCAAAAACCAAAAACCAAAA 60.148 29.630 0.00 0.00 0.00 2.44
2641 5391 6.321435 ACAGAAACCAAAAACCAAAAACCAAA 59.679 30.769 0.00 0.00 0.00 3.28
2642 5392 5.828328 ACAGAAACCAAAAACCAAAAACCAA 59.172 32.000 0.00 0.00 0.00 3.67
2643 5393 5.377478 ACAGAAACCAAAAACCAAAAACCA 58.623 33.333 0.00 0.00 0.00 3.67
2644 5394 5.950758 ACAGAAACCAAAAACCAAAAACC 57.049 34.783 0.00 0.00 0.00 3.27
2645 5395 7.197017 ACAAACAGAAACCAAAAACCAAAAAC 58.803 30.769 0.00 0.00 0.00 2.43
2712 5621 7.885399 ACATTTGCCCAAGATTACTCCTATATC 59.115 37.037 0.00 0.00 0.00 1.63
2740 5649 1.329256 AGGACGTGTGTACTTCTGCT 58.671 50.000 0.00 0.00 34.87 4.24
3025 6034 7.721842 TCTGAACCAACTATTTACCAAATGACA 59.278 33.333 0.00 0.00 32.38 3.58
3027 6036 8.698973 TTCTGAACCAACTATTTACCAAATGA 57.301 30.769 0.00 0.00 32.38 2.57
3036 6046 7.067496 TCTGAGACTTCTGAACCAACTATTT 57.933 36.000 0.00 0.00 0.00 1.40
3464 6515 5.295787 TGAACAGTTGATTGTACAGGAACAC 59.704 40.000 13.21 2.66 0.00 3.32
3465 6516 5.432645 TGAACAGTTGATTGTACAGGAACA 58.567 37.500 13.21 3.85 0.00 3.18
3519 6652 7.171508 CAGAAGCAAGAGTCAACATACAGTTTA 59.828 37.037 0.00 0.00 38.74 2.01
3521 6654 5.468072 CAGAAGCAAGAGTCAACATACAGTT 59.532 40.000 0.00 0.00 42.42 3.16
3522 6655 4.993584 CAGAAGCAAGAGTCAACATACAGT 59.006 41.667 0.00 0.00 0.00 3.55
3523 6656 5.233225 TCAGAAGCAAGAGTCAACATACAG 58.767 41.667 0.00 0.00 0.00 2.74
3540 6673 3.920231 TCAGGTCCCATCAATCAGAAG 57.080 47.619 0.00 0.00 0.00 2.85
3543 6676 3.136763 CGATTCAGGTCCCATCAATCAG 58.863 50.000 0.00 0.00 0.00 2.90
3604 7329 9.832445 TGTTCAGTAAGAAAACAAGAAGATACT 57.168 29.630 0.00 0.00 38.13 2.12
3776 7506 8.243426 GCAAGGAACACACAAATATGAGAATTA 58.757 33.333 0.00 0.00 0.00 1.40
4036 7773 2.092753 CCTCATGTGTGTCCTGCCTATT 60.093 50.000 0.00 0.00 0.00 1.73
4253 8074 5.336150 TCTCCTGCAAATGACAAACAAAA 57.664 34.783 0.00 0.00 0.00 2.44
4282 8103 3.670627 GCATGCCACTACTGTTAAGCAAC 60.671 47.826 6.36 0.00 33.35 4.17
4346 8167 7.769220 TCGGGTTGTTAACTTTTCAATAAACA 58.231 30.769 7.22 0.00 0.00 2.83
4400 8225 0.102120 TTGCCGTTGTTCCTTTGCAG 59.898 50.000 0.00 0.00 0.00 4.41
4444 8269 6.935741 TGTTGTAGTACTCAAACAAGCATT 57.064 33.333 16.81 0.00 34.01 3.56
4458 8283 4.571919 GGTAGGTGTGCATTGTTGTAGTA 58.428 43.478 0.00 0.00 0.00 1.82
5271 9186 4.180946 CTCGGACTCGCTCCACCG 62.181 72.222 0.00 0.00 45.61 4.94
5478 9616 9.753674 AACTTTAATCCAGTGGAATCTATTCAA 57.246 29.630 17.71 2.59 38.53 2.69
5557 9745 5.661312 TGTATATGCTATGCCTACCCCTAAG 59.339 44.000 0.00 0.00 0.00 2.18
5608 9884 4.073169 TCACACGACAACACAAGTTTTC 57.927 40.909 0.00 0.00 35.28 2.29
5704 10201 7.964559 TCTGTTGAATTTTTGCATAAGAGATCG 59.035 33.333 0.00 0.00 0.00 3.69
5739 10238 5.685841 CAACCCAACTCAACACTATTAACG 58.314 41.667 0.00 0.00 0.00 3.18
5773 10272 6.813649 TCTGCTTCATTACTGTATTCACTCAC 59.186 38.462 0.00 0.00 0.00 3.51
5805 10304 4.460263 ACACAAGAAAGAATGCACAGGTA 58.540 39.130 0.00 0.00 0.00 3.08
5806 10305 3.290710 ACACAAGAAAGAATGCACAGGT 58.709 40.909 0.00 0.00 0.00 4.00
5807 10306 3.996150 ACACAAGAAAGAATGCACAGG 57.004 42.857 0.00 0.00 0.00 4.00
5808 10307 4.046462 CCAACACAAGAAAGAATGCACAG 58.954 43.478 0.00 0.00 0.00 3.66
5872 10412 4.991056 AGTGCGTATATATGCCAAACTGAG 59.009 41.667 21.47 0.00 37.41 3.35
5904 10444 7.546358 TGTATGGCAAACTAATTTCATCCTTG 58.454 34.615 0.00 0.00 0.00 3.61
5923 10463 4.000988 ACGACTGCCTTTTTACTGTATGG 58.999 43.478 0.00 0.00 0.00 2.74
5934 10474 6.512297 ACAAATTAATCAAACGACTGCCTTT 58.488 32.000 0.00 0.00 0.00 3.11
5962 10502 3.164268 AGCTTGGCACATATGAACCAAA 58.836 40.909 24.44 14.33 41.44 3.28
6033 10573 8.885494 TTCTTGGAATACAAAACAAATTCTGG 57.115 30.769 0.00 0.00 38.91 3.86
6180 10765 8.714179 CGTCTTACATTATGGTAGTGTCAAAAA 58.286 33.333 0.00 0.00 30.84 1.94
6181 10766 7.874016 ACGTCTTACATTATGGTAGTGTCAAAA 59.126 33.333 0.00 0.00 30.84 2.44
6182 10767 7.380536 ACGTCTTACATTATGGTAGTGTCAAA 58.619 34.615 0.00 0.00 30.84 2.69
6183 10768 6.927416 ACGTCTTACATTATGGTAGTGTCAA 58.073 36.000 0.00 0.00 30.84 3.18
6184 10769 6.519679 ACGTCTTACATTATGGTAGTGTCA 57.480 37.500 0.00 0.00 30.84 3.58
6185 10770 7.823149 AAACGTCTTACATTATGGTAGTGTC 57.177 36.000 0.00 0.00 30.84 3.67
6186 10771 8.611654 AAAAACGTCTTACATTATGGTAGTGT 57.388 30.769 0.00 0.00 33.05 3.55
6236 10821 4.408921 CCCTCTGTCCCATAATGTAAGACA 59.591 45.833 0.00 0.00 36.16 3.41
6243 10828 4.840680 TCATACTCCCTCTGTCCCATAATG 59.159 45.833 0.00 0.00 0.00 1.90
6245 10830 4.078571 ACTCATACTCCCTCTGTCCCATAA 60.079 45.833 0.00 0.00 0.00 1.90
6252 10837 5.580998 TGTTCTAACTCATACTCCCTCTGT 58.419 41.667 0.00 0.00 0.00 3.41
6271 10856 7.492344 ACATCCTCAACAAAAATCAAGTTGTTC 59.508 33.333 2.11 0.00 44.14 3.18
6287 10877 7.973944 ACAGAAAGTTGTTTTAACATCCTCAAC 59.026 33.333 0.00 0.00 38.95 3.18
6296 10886 9.575783 TCAATTGGTACAGAAAGTTGTTTTAAC 57.424 29.630 5.42 0.00 42.39 2.01
6309 10899 4.299586 TGCCTGAATCAATTGGTACAGA 57.700 40.909 19.88 6.29 42.39 3.41
6310 10900 6.263842 ACATATGCCTGAATCAATTGGTACAG 59.736 38.462 5.42 11.56 42.39 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.