Multiple sequence alignment - TraesCS6A01G060400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G060400 chr6A 100.000 3200 0 0 1 3200 32227351 32230550 0.000000e+00 5910.0
1 TraesCS6A01G060400 chr6A 92.597 797 57 2 2405 3200 74907895 74908690 0.000000e+00 1144.0
2 TraesCS6A01G060400 chr6A 85.168 1099 134 25 909 1991 32251570 32250485 0.000000e+00 1099.0
3 TraesCS6A01G060400 chr6A 81.489 1021 155 20 991 1988 32412796 32411787 0.000000e+00 808.0
4 TraesCS6A01G060400 chr6A 81.391 1021 155 21 991 1988 32520408 32519400 0.000000e+00 800.0
5 TraesCS6A01G060400 chr6B 92.926 1456 73 16 878 2324 56993149 56991715 0.000000e+00 2091.0
6 TraesCS6A01G060400 chr6B 83.891 1136 139 22 876 1991 56915055 56916166 0.000000e+00 1044.0
7 TraesCS6A01G060400 chr6B 83.692 1116 142 21 848 1936 57002309 57001207 0.000000e+00 1016.0
8 TraesCS6A01G060400 chr6B 97.324 299 7 1 531 828 551770213 551769915 1.020000e-139 507.0
9 TraesCS6A01G060400 chr4A 92.597 797 57 2 2405 3200 161172087 161171292 0.000000e+00 1144.0
10 TraesCS6A01G060400 chr4A 96.721 305 10 0 525 829 166994205 166993901 2.850000e-140 508.0
11 TraesCS6A01G060400 chr4A 96.405 306 11 0 525 830 615081598 615081293 3.680000e-139 505.0
12 TraesCS6A01G060400 chr4A 84.494 316 26 7 150 450 168113769 168114076 1.120000e-74 291.0
13 TraesCS6A01G060400 chr6D 84.970 1151 139 25 859 1991 30483991 30482857 0.000000e+00 1136.0
14 TraesCS6A01G060400 chr6D 85.005 1107 140 15 909 1994 30536350 30535249 0.000000e+00 1101.0
15 TraesCS6A01G060400 chr6D 82.084 1027 150 23 991 1988 31261540 31262561 0.000000e+00 846.0
16 TraesCS6A01G060400 chr5B 83.718 780 124 3 2421 3199 391902812 391902035 0.000000e+00 734.0
17 TraesCS6A01G060400 chr7A 95.565 451 17 3 1 450 457607664 457608112 0.000000e+00 719.0
18 TraesCS6A01G060400 chr7A 96.440 309 11 0 520 828 732945690 732945998 7.920000e-141 510.0
19 TraesCS6A01G060400 chr7A 94.737 228 12 0 1 228 620395002 620394775 3.930000e-94 355.0
20 TraesCS6A01G060400 chr7A 94.860 214 10 1 236 449 620394442 620394230 1.840000e-87 333.0
21 TraesCS6A01G060400 chr5A 94.209 449 21 4 1 448 208807910 208807466 0.000000e+00 680.0
22 TraesCS6A01G060400 chr1A 90.022 451 34 8 1 449 22852736 22853177 9.960000e-160 573.0
23 TraesCS6A01G060400 chr1A 94.328 335 19 0 2839 3173 462728291 462728625 6.120000e-142 514.0
24 TraesCS6A01G060400 chr1A 97.030 303 8 1 527 828 520860758 520861060 2.850000e-140 508.0
25 TraesCS6A01G060400 chr1A 74.138 812 162 35 2406 3198 155767006 155767788 3.120000e-75 292.0
26 TraesCS6A01G060400 chr3D 88.767 454 37 10 1 449 120125790 120126234 7.810000e-151 544.0
27 TraesCS6A01G060400 chr3D 88.274 452 40 9 1 448 614235609 614235167 2.190000e-146 529.0
28 TraesCS6A01G060400 chr3B 97.377 305 7 1 525 828 606376050 606376354 4.730000e-143 518.0
29 TraesCS6A01G060400 chr3B 96.711 304 10 0 525 828 4554887 4554584 1.020000e-139 507.0
30 TraesCS6A01G060400 chrUn 96.721 305 10 0 525 829 200950209 200950513 2.850000e-140 508.0
31 TraesCS6A01G060400 chrUn 88.770 187 18 3 273 459 19851686 19851869 3.210000e-55 226.0
32 TraesCS6A01G060400 chr4D 96.117 309 11 1 521 828 459568965 459568657 1.330000e-138 503.0
33 TraesCS6A01G060400 chr4D 76.224 143 29 5 2824 2962 72587051 72587192 1.590000e-08 71.3
34 TraesCS6A01G060400 chr5D 91.781 219 17 1 1 219 545982996 545983213 1.440000e-78 303.0
35 TraesCS6A01G060400 chr5D 91.163 215 18 1 235 449 545983425 545983638 1.120000e-74 291.0
36 TraesCS6A01G060400 chr4B 77.188 377 71 10 2827 3198 96664039 96663673 4.180000e-49 206.0
37 TraesCS6A01G060400 chr7D 84.694 98 13 2 3027 3123 329097489 329097393 2.630000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G060400 chr6A 32227351 32230550 3199 False 5910 5910 100.0000 1 3200 1 chr6A.!!$F1 3199
1 TraesCS6A01G060400 chr6A 74907895 74908690 795 False 1144 1144 92.5970 2405 3200 1 chr6A.!!$F2 795
2 TraesCS6A01G060400 chr6A 32250485 32251570 1085 True 1099 1099 85.1680 909 1991 1 chr6A.!!$R1 1082
3 TraesCS6A01G060400 chr6A 32411787 32412796 1009 True 808 808 81.4890 991 1988 1 chr6A.!!$R2 997
4 TraesCS6A01G060400 chr6A 32519400 32520408 1008 True 800 800 81.3910 991 1988 1 chr6A.!!$R3 997
5 TraesCS6A01G060400 chr6B 56991715 56993149 1434 True 2091 2091 92.9260 878 2324 1 chr6B.!!$R1 1446
6 TraesCS6A01G060400 chr6B 56915055 56916166 1111 False 1044 1044 83.8910 876 1991 1 chr6B.!!$F1 1115
7 TraesCS6A01G060400 chr6B 57001207 57002309 1102 True 1016 1016 83.6920 848 1936 1 chr6B.!!$R2 1088
8 TraesCS6A01G060400 chr4A 161171292 161172087 795 True 1144 1144 92.5970 2405 3200 1 chr4A.!!$R1 795
9 TraesCS6A01G060400 chr6D 30482857 30483991 1134 True 1136 1136 84.9700 859 1991 1 chr6D.!!$R1 1132
10 TraesCS6A01G060400 chr6D 30535249 30536350 1101 True 1101 1101 85.0050 909 1994 1 chr6D.!!$R2 1085
11 TraesCS6A01G060400 chr6D 31261540 31262561 1021 False 846 846 82.0840 991 1988 1 chr6D.!!$F1 997
12 TraesCS6A01G060400 chr5B 391902035 391902812 777 True 734 734 83.7180 2421 3199 1 chr5B.!!$R1 778
13 TraesCS6A01G060400 chr7A 620394230 620395002 772 True 344 355 94.7985 1 449 2 chr7A.!!$R1 448
14 TraesCS6A01G060400 chr1A 155767006 155767788 782 False 292 292 74.1380 2406 3198 1 chr1A.!!$F2 792
15 TraesCS6A01G060400 chr5D 545982996 545983638 642 False 297 303 91.4720 1 449 2 chr5D.!!$F1 448

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
603 929 0.035152 TCAAATCCTGGTGCTCGCAT 60.035 50.0 0.0 0.0 0.0 4.73 F
776 1102 0.036765 GTGTGCGTTCATAGGGGTGA 60.037 55.0 0.0 0.0 0.0 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2090 2486 0.028242 CTCGACGCTGTAGCAGTAGG 59.972 60.0 4.59 0.47 42.21 3.18 R
2593 3000 0.179000 CGGTAGGAGCTGAATTGGCT 59.821 55.0 0.00 2.60 43.26 4.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
85 86 4.966787 GTTGCAGCGGTGGGGGAA 62.967 66.667 17.54 0.00 0.00 3.97
101 102 3.612371 GAAGAGGTCGCGCACTCGT 62.612 63.158 19.34 17.41 38.72 4.18
128 129 1.066430 GTGGTTGAAGCATCTCCGGTA 60.066 52.381 0.00 0.00 0.00 4.02
144 145 1.614241 GGTAGACGGGTCCAGCACAT 61.614 60.000 0.00 0.00 0.00 3.21
157 158 1.878522 GCACATGGGAGTACGAGCG 60.879 63.158 0.00 0.00 0.00 5.03
186 187 1.005037 GATGGCATATCCGTGGCGA 60.005 57.895 0.00 0.00 46.68 5.54
228 229 1.810030 CGCGGAAGGAACCTGTAGC 60.810 63.158 0.00 0.00 0.00 3.58
229 230 1.449778 GCGGAAGGAACCTGTAGCC 60.450 63.158 0.00 0.00 0.00 3.93
230 231 1.153628 CGGAAGGAACCTGTAGCCG 60.154 63.158 9.13 9.13 0.00 5.52
231 232 1.221021 GGAAGGAACCTGTAGCCGG 59.779 63.158 0.00 0.00 0.00 6.13
232 233 1.221021 GAAGGAACCTGTAGCCGGG 59.779 63.158 2.18 0.00 43.41 5.73
233 234 2.253403 GAAGGAACCTGTAGCCGGGG 62.253 65.000 2.18 0.00 41.93 5.73
282 608 1.112113 GTCCGCACTAAGGATGGAGA 58.888 55.000 0.00 0.00 40.30 3.71
327 653 4.918201 GGCGGCGGGATCTGAAGG 62.918 72.222 9.78 0.00 0.00 3.46
328 654 3.849951 GCGGCGGGATCTGAAGGA 61.850 66.667 9.78 0.00 0.00 3.36
329 655 2.419198 CGGCGGGATCTGAAGGAG 59.581 66.667 0.00 0.00 0.00 3.69
330 656 2.825264 GGCGGGATCTGAAGGAGG 59.175 66.667 0.00 0.00 0.00 4.30
331 657 1.762460 GGCGGGATCTGAAGGAGGA 60.762 63.158 0.00 0.00 0.00 3.71
332 658 1.338136 GGCGGGATCTGAAGGAGGAA 61.338 60.000 0.00 0.00 0.00 3.36
333 659 0.105778 GCGGGATCTGAAGGAGGAAG 59.894 60.000 0.00 0.00 0.00 3.46
334 660 1.781786 CGGGATCTGAAGGAGGAAGA 58.218 55.000 0.00 0.00 0.00 2.87
335 661 2.111384 CGGGATCTGAAGGAGGAAGAA 58.889 52.381 0.00 0.00 0.00 2.52
336 662 2.501723 CGGGATCTGAAGGAGGAAGAAA 59.498 50.000 0.00 0.00 0.00 2.52
337 663 3.431486 CGGGATCTGAAGGAGGAAGAAAG 60.431 52.174 0.00 0.00 0.00 2.62
338 664 3.118075 GGGATCTGAAGGAGGAAGAAAGG 60.118 52.174 0.00 0.00 0.00 3.11
339 665 3.118075 GGATCTGAAGGAGGAAGAAAGGG 60.118 52.174 0.00 0.00 0.00 3.95
340 666 3.275848 TCTGAAGGAGGAAGAAAGGGA 57.724 47.619 0.00 0.00 0.00 4.20
341 667 3.808189 TCTGAAGGAGGAAGAAAGGGAT 58.192 45.455 0.00 0.00 0.00 3.85
342 668 3.777522 TCTGAAGGAGGAAGAAAGGGATC 59.222 47.826 0.00 0.00 0.00 3.36
343 669 3.521126 CTGAAGGAGGAAGAAAGGGATCA 59.479 47.826 0.00 0.00 0.00 2.92
344 670 3.521126 TGAAGGAGGAAGAAAGGGATCAG 59.479 47.826 0.00 0.00 0.00 2.90
345 671 2.486716 AGGAGGAAGAAAGGGATCAGG 58.513 52.381 0.00 0.00 0.00 3.86
346 672 2.046447 AGGAGGAAGAAAGGGATCAGGA 59.954 50.000 0.00 0.00 0.00 3.86
347 673 2.437651 GGAGGAAGAAAGGGATCAGGAG 59.562 54.545 0.00 0.00 0.00 3.69
348 674 2.437651 GAGGAAGAAAGGGATCAGGAGG 59.562 54.545 0.00 0.00 0.00 4.30
349 675 2.046447 AGGAAGAAAGGGATCAGGAGGA 59.954 50.000 0.00 0.00 0.00 3.71
350 676 2.437651 GGAAGAAAGGGATCAGGAGGAG 59.562 54.545 0.00 0.00 0.00 3.69
351 677 1.506025 AGAAAGGGATCAGGAGGAGC 58.494 55.000 0.00 0.00 0.00 4.70
352 678 0.105778 GAAAGGGATCAGGAGGAGCG 59.894 60.000 0.00 0.00 30.89 5.03
353 679 1.977293 AAAGGGATCAGGAGGAGCGC 61.977 60.000 0.00 0.00 44.41 5.92
354 680 4.292178 GGGATCAGGAGGAGCGCG 62.292 72.222 0.00 0.00 35.08 6.86
355 681 3.219928 GGATCAGGAGGAGCGCGA 61.220 66.667 12.10 0.00 30.89 5.87
356 682 2.334653 GATCAGGAGGAGCGCGAG 59.665 66.667 12.10 0.00 0.00 5.03
357 683 3.206211 GATCAGGAGGAGCGCGAGG 62.206 68.421 12.10 0.00 0.00 4.63
385 711 2.659897 GCTTCGCCTCGCATCGAT 60.660 61.111 0.00 0.00 34.61 3.59
386 712 2.653022 GCTTCGCCTCGCATCGATC 61.653 63.158 0.00 0.00 34.61 3.69
387 713 2.353492 TTCGCCTCGCATCGATCG 60.353 61.111 9.36 9.36 34.61 3.69
388 714 2.717428 CTTCGCCTCGCATCGATCGA 62.717 60.000 21.86 21.86 38.30 3.59
392 718 4.218597 CTCGCATCGATCGAGTGG 57.781 61.111 23.84 15.69 45.86 4.00
393 719 2.013483 CTCGCATCGATCGAGTGGC 61.013 63.158 23.84 22.80 45.86 5.01
394 720 3.032609 CGCATCGATCGAGTGGCC 61.033 66.667 23.84 0.00 0.00 5.36
395 721 2.663188 GCATCGATCGAGTGGCCC 60.663 66.667 23.84 4.09 0.00 5.80
396 722 2.355126 CATCGATCGAGTGGCCCG 60.355 66.667 23.84 0.00 0.00 6.13
397 723 4.286320 ATCGATCGAGTGGCCCGC 62.286 66.667 23.84 0.00 0.00 6.13
427 753 4.974989 GAACGGTTCCACGGGCGT 62.975 66.667 9.75 0.00 38.39 5.68
437 763 3.993584 ACGGGCGTGCCGTTTCTA 61.994 61.111 4.53 0.00 41.27 2.10
438 764 2.739287 CGGGCGTGCCGTTTCTAA 60.739 61.111 4.53 0.00 36.85 2.10
439 765 2.319096 CGGGCGTGCCGTTTCTAAA 61.319 57.895 4.53 0.00 36.85 1.85
440 766 1.208358 GGGCGTGCCGTTTCTAAAC 59.792 57.895 4.53 0.00 36.85 2.01
441 767 1.508808 GGGCGTGCCGTTTCTAAACA 61.509 55.000 4.53 0.00 38.81 2.83
442 768 0.385098 GGCGTGCCGTTTCTAAACAC 60.385 55.000 6.41 0.00 38.81 3.32
443 769 0.584876 GCGTGCCGTTTCTAAACACT 59.415 50.000 6.41 0.00 38.81 3.55
444 770 1.003223 GCGTGCCGTTTCTAAACACTT 60.003 47.619 6.41 0.00 38.81 3.16
445 771 2.899977 CGTGCCGTTTCTAAACACTTC 58.100 47.619 6.41 0.00 38.81 3.01
446 772 2.349155 CGTGCCGTTTCTAAACACTTCC 60.349 50.000 6.41 0.00 38.81 3.46
447 773 2.031420 GTGCCGTTTCTAAACACTTCCC 60.031 50.000 6.41 0.00 38.81 3.97
448 774 2.158726 TGCCGTTTCTAAACACTTCCCT 60.159 45.455 6.41 0.00 38.81 4.20
449 775 3.071312 TGCCGTTTCTAAACACTTCCCTA 59.929 43.478 6.41 0.00 38.81 3.53
450 776 3.434641 GCCGTTTCTAAACACTTCCCTAC 59.565 47.826 6.41 0.00 38.81 3.18
451 777 4.801914 GCCGTTTCTAAACACTTCCCTACT 60.802 45.833 6.41 0.00 38.81 2.57
452 778 5.303165 CCGTTTCTAAACACTTCCCTACTT 58.697 41.667 6.41 0.00 38.81 2.24
453 779 6.458210 CCGTTTCTAAACACTTCCCTACTTA 58.542 40.000 6.41 0.00 38.81 2.24
454 780 7.101700 CCGTTTCTAAACACTTCCCTACTTAT 58.898 38.462 6.41 0.00 38.81 1.73
455 781 7.605309 CCGTTTCTAAACACTTCCCTACTTATT 59.395 37.037 6.41 0.00 38.81 1.40
456 782 9.643693 CGTTTCTAAACACTTCCCTACTTATTA 57.356 33.333 6.41 0.00 38.81 0.98
458 784 9.643693 TTTCTAAACACTTCCCTACTTATTACG 57.356 33.333 0.00 0.00 0.00 3.18
459 785 8.579850 TCTAAACACTTCCCTACTTATTACGA 57.420 34.615 0.00 0.00 0.00 3.43
460 786 9.193806 TCTAAACACTTCCCTACTTATTACGAT 57.806 33.333 0.00 0.00 0.00 3.73
461 787 9.245962 CTAAACACTTCCCTACTTATTACGATG 57.754 37.037 0.00 0.00 0.00 3.84
462 788 7.414222 AACACTTCCCTACTTATTACGATGA 57.586 36.000 0.00 0.00 0.00 2.92
463 789 7.414222 ACACTTCCCTACTTATTACGATGAA 57.586 36.000 0.00 0.00 0.00 2.57
464 790 7.490000 ACACTTCCCTACTTATTACGATGAAG 58.510 38.462 0.00 0.00 34.40 3.02
465 791 6.421202 CACTTCCCTACTTATTACGATGAAGC 59.579 42.308 0.00 0.00 32.09 3.86
466 792 6.097839 ACTTCCCTACTTATTACGATGAAGCA 59.902 38.462 0.00 0.00 32.09 3.91
467 793 6.665992 TCCCTACTTATTACGATGAAGCAT 57.334 37.500 0.00 0.00 0.00 3.79
468 794 7.062749 TCCCTACTTATTACGATGAAGCATT 57.937 36.000 0.00 0.00 0.00 3.56
469 795 8.185506 TCCCTACTTATTACGATGAAGCATTA 57.814 34.615 0.00 0.00 0.00 1.90
470 796 8.812972 TCCCTACTTATTACGATGAAGCATTAT 58.187 33.333 0.00 0.00 0.00 1.28
471 797 9.436957 CCCTACTTATTACGATGAAGCATTATT 57.563 33.333 0.00 0.00 0.00 1.40
475 801 8.076178 ACTTATTACGATGAAGCATTATTTGGC 58.924 33.333 0.00 0.00 0.00 4.52
476 802 3.715628 ACGATGAAGCATTATTTGGCC 57.284 42.857 0.00 0.00 0.00 5.36
477 803 3.023119 ACGATGAAGCATTATTTGGCCA 58.977 40.909 0.00 0.00 0.00 5.36
478 804 3.067180 ACGATGAAGCATTATTTGGCCAG 59.933 43.478 5.11 0.00 0.00 4.85
479 805 3.067180 CGATGAAGCATTATTTGGCCAGT 59.933 43.478 5.11 1.00 0.00 4.00
480 806 4.614946 GATGAAGCATTATTTGGCCAGTC 58.385 43.478 5.11 0.00 0.00 3.51
481 807 3.700538 TGAAGCATTATTTGGCCAGTCT 58.299 40.909 5.11 0.00 0.00 3.24
482 808 4.088634 TGAAGCATTATTTGGCCAGTCTT 58.911 39.130 5.11 2.84 0.00 3.01
483 809 4.158394 TGAAGCATTATTTGGCCAGTCTTC 59.842 41.667 5.11 11.99 0.00 2.87
484 810 3.026694 AGCATTATTTGGCCAGTCTTCC 58.973 45.455 5.11 0.00 0.00 3.46
485 811 2.760092 GCATTATTTGGCCAGTCTTCCA 59.240 45.455 5.11 0.00 0.00 3.53
486 812 3.429410 GCATTATTTGGCCAGTCTTCCAC 60.429 47.826 5.11 0.00 30.97 4.02
487 813 3.806949 TTATTTGGCCAGTCTTCCACT 57.193 42.857 5.11 0.00 34.67 4.00
488 814 2.206576 ATTTGGCCAGTCTTCCACTC 57.793 50.000 5.11 0.00 30.26 3.51
489 815 0.110486 TTTGGCCAGTCTTCCACTCC 59.890 55.000 5.11 0.00 30.26 3.85
490 816 1.059584 TTGGCCAGTCTTCCACTCCA 61.060 55.000 5.11 0.00 30.26 3.86
491 817 1.003233 GGCCAGTCTTCCACTCCAC 60.003 63.158 0.00 0.00 30.26 4.02
492 818 1.003233 GCCAGTCTTCCACTCCACC 60.003 63.158 0.00 0.00 30.26 4.61
493 819 1.679898 CCAGTCTTCCACTCCACCC 59.320 63.158 0.00 0.00 30.26 4.61
494 820 1.127567 CCAGTCTTCCACTCCACCCA 61.128 60.000 0.00 0.00 30.26 4.51
495 821 0.764890 CAGTCTTCCACTCCACCCAA 59.235 55.000 0.00 0.00 30.26 4.12
496 822 1.059913 AGTCTTCCACTCCACCCAAG 58.940 55.000 0.00 0.00 0.00 3.61
497 823 0.765510 GTCTTCCACTCCACCCAAGT 59.234 55.000 0.00 0.00 0.00 3.16
498 824 1.056660 TCTTCCACTCCACCCAAGTC 58.943 55.000 0.00 0.00 0.00 3.01
499 825 1.059913 CTTCCACTCCACCCAAGTCT 58.940 55.000 0.00 0.00 0.00 3.24
500 826 0.764890 TTCCACTCCACCCAAGTCTG 59.235 55.000 0.00 0.00 0.00 3.51
501 827 0.399949 TCCACTCCACCCAAGTCTGT 60.400 55.000 0.00 0.00 0.00 3.41
502 828 0.474184 CCACTCCACCCAAGTCTGTT 59.526 55.000 0.00 0.00 0.00 3.16
503 829 1.133792 CCACTCCACCCAAGTCTGTTT 60.134 52.381 0.00 0.00 0.00 2.83
504 830 2.654863 CACTCCACCCAAGTCTGTTTT 58.345 47.619 0.00 0.00 0.00 2.43
505 831 2.358898 CACTCCACCCAAGTCTGTTTTG 59.641 50.000 0.00 0.00 0.00 2.44
506 832 2.025321 ACTCCACCCAAGTCTGTTTTGT 60.025 45.455 0.00 0.00 0.00 2.83
507 833 3.023832 CTCCACCCAAGTCTGTTTTGTT 58.976 45.455 0.00 0.00 0.00 2.83
508 834 3.436243 TCCACCCAAGTCTGTTTTGTTT 58.564 40.909 0.00 0.00 0.00 2.83
509 835 4.601084 TCCACCCAAGTCTGTTTTGTTTA 58.399 39.130 0.00 0.00 0.00 2.01
510 836 5.017490 TCCACCCAAGTCTGTTTTGTTTAA 58.983 37.500 0.00 0.00 0.00 1.52
511 837 5.480772 TCCACCCAAGTCTGTTTTGTTTAAA 59.519 36.000 0.00 0.00 0.00 1.52
512 838 6.014499 TCCACCCAAGTCTGTTTTGTTTAAAA 60.014 34.615 0.00 0.00 33.57 1.52
513 839 6.821160 CCACCCAAGTCTGTTTTGTTTAAAAT 59.179 34.615 0.00 0.00 38.01 1.82
514 840 7.201600 CCACCCAAGTCTGTTTTGTTTAAAATG 60.202 37.037 0.00 0.00 38.01 2.32
515 841 6.821160 ACCCAAGTCTGTTTTGTTTAAAATGG 59.179 34.615 0.00 0.00 38.01 3.16
516 842 7.044798 CCCAAGTCTGTTTTGTTTAAAATGGA 58.955 34.615 0.00 0.00 38.01 3.41
517 843 7.714813 CCCAAGTCTGTTTTGTTTAAAATGGAT 59.285 33.333 0.00 0.00 38.01 3.41
518 844 8.764287 CCAAGTCTGTTTTGTTTAAAATGGATC 58.236 33.333 0.00 0.00 38.01 3.36
519 845 9.533253 CAAGTCTGTTTTGTTTAAAATGGATCT 57.467 29.630 0.00 0.00 38.01 2.75
522 848 9.959749 GTCTGTTTTGTTTAAAATGGATCTACA 57.040 29.630 0.00 0.00 38.01 2.74
524 850 9.410556 CTGTTTTGTTTAAAATGGATCTACAGG 57.589 33.333 0.00 0.00 38.01 4.00
525 851 7.870445 TGTTTTGTTTAAAATGGATCTACAGGC 59.130 33.333 0.00 0.00 38.01 4.85
526 852 5.811399 TGTTTAAAATGGATCTACAGGCG 57.189 39.130 0.00 0.00 0.00 5.52
527 853 5.492895 TGTTTAAAATGGATCTACAGGCGA 58.507 37.500 0.00 0.00 0.00 5.54
528 854 5.353123 TGTTTAAAATGGATCTACAGGCGAC 59.647 40.000 0.00 0.00 0.00 5.19
529 855 2.622064 AAATGGATCTACAGGCGACC 57.378 50.000 0.00 0.00 0.00 4.79
530 856 0.759346 AATGGATCTACAGGCGACCC 59.241 55.000 0.00 0.00 0.00 4.46
531 857 0.398522 ATGGATCTACAGGCGACCCA 60.399 55.000 0.00 0.00 0.00 4.51
532 858 0.616395 TGGATCTACAGGCGACCCAA 60.616 55.000 0.00 0.00 0.00 4.12
533 859 0.179081 GGATCTACAGGCGACCCAAC 60.179 60.000 0.00 0.00 0.00 3.77
534 860 0.179081 GATCTACAGGCGACCCAACC 60.179 60.000 0.00 0.00 0.00 3.77
535 861 0.617820 ATCTACAGGCGACCCAACCT 60.618 55.000 0.00 0.00 36.45 3.50
538 864 2.669569 CAGGCGACCCAACCTGTG 60.670 66.667 0.79 0.00 46.95 3.66
552 878 3.703001 ACCTGTGGTTGAGATGGTTAG 57.297 47.619 0.00 0.00 27.29 2.34
553 879 2.305927 ACCTGTGGTTGAGATGGTTAGG 59.694 50.000 0.00 0.00 27.29 2.69
554 880 2.305927 CCTGTGGTTGAGATGGTTAGGT 59.694 50.000 0.00 0.00 0.00 3.08
555 881 3.338249 CTGTGGTTGAGATGGTTAGGTG 58.662 50.000 0.00 0.00 0.00 4.00
556 882 2.039746 TGTGGTTGAGATGGTTAGGTGG 59.960 50.000 0.00 0.00 0.00 4.61
557 883 2.304761 GTGGTTGAGATGGTTAGGTGGA 59.695 50.000 0.00 0.00 0.00 4.02
558 884 2.304761 TGGTTGAGATGGTTAGGTGGAC 59.695 50.000 0.00 0.00 0.00 4.02
559 885 2.304761 GGTTGAGATGGTTAGGTGGACA 59.695 50.000 0.00 0.00 0.00 4.02
560 886 3.600388 GTTGAGATGGTTAGGTGGACAG 58.400 50.000 0.00 0.00 0.00 3.51
561 887 2.902608 TGAGATGGTTAGGTGGACAGT 58.097 47.619 0.00 0.00 0.00 3.55
562 888 2.567169 TGAGATGGTTAGGTGGACAGTG 59.433 50.000 0.00 0.00 0.00 3.66
563 889 1.909302 AGATGGTTAGGTGGACAGTGG 59.091 52.381 0.00 0.00 0.00 4.00
564 890 1.628846 GATGGTTAGGTGGACAGTGGT 59.371 52.381 0.00 0.00 0.00 4.16
565 891 2.402182 TGGTTAGGTGGACAGTGGTA 57.598 50.000 0.00 0.00 0.00 3.25
566 892 2.910544 TGGTTAGGTGGACAGTGGTAT 58.089 47.619 0.00 0.00 0.00 2.73
567 893 2.835764 TGGTTAGGTGGACAGTGGTATC 59.164 50.000 0.00 0.00 0.00 2.24
568 894 2.169978 GGTTAGGTGGACAGTGGTATCC 59.830 54.545 0.00 0.00 35.37 2.59
569 895 2.169978 GTTAGGTGGACAGTGGTATCCC 59.830 54.545 0.00 0.00 33.69 3.85
570 896 0.620700 AGGTGGACAGTGGTATCCCC 60.621 60.000 0.00 0.00 33.69 4.81
571 897 0.912487 GGTGGACAGTGGTATCCCCA 60.912 60.000 0.00 0.00 42.51 4.96
578 904 3.844063 TGGTATCCCCAACCCACC 58.156 61.111 0.00 0.00 41.50 4.61
579 905 1.151565 TGGTATCCCCAACCCACCA 60.152 57.895 0.00 0.00 41.50 4.17
580 906 1.211567 TGGTATCCCCAACCCACCAG 61.212 60.000 0.00 0.00 41.50 4.00
581 907 1.613061 GTATCCCCAACCCACCAGG 59.387 63.158 0.00 0.00 43.78 4.45
597 923 3.363787 AGGGTTCAAATCCTGGTGC 57.636 52.632 0.00 0.00 38.36 5.01
598 924 0.779997 AGGGTTCAAATCCTGGTGCT 59.220 50.000 0.00 0.00 38.36 4.40
599 925 1.177401 GGGTTCAAATCCTGGTGCTC 58.823 55.000 0.00 0.00 0.00 4.26
600 926 0.804989 GGTTCAAATCCTGGTGCTCG 59.195 55.000 0.00 0.00 0.00 5.03
601 927 0.169009 GTTCAAATCCTGGTGCTCGC 59.831 55.000 0.00 0.00 0.00 5.03
602 928 0.250684 TTCAAATCCTGGTGCTCGCA 60.251 50.000 0.00 0.00 0.00 5.10
603 929 0.035152 TCAAATCCTGGTGCTCGCAT 60.035 50.000 0.00 0.00 0.00 4.73
604 930 0.813184 CAAATCCTGGTGCTCGCATT 59.187 50.000 0.00 0.00 0.00 3.56
605 931 2.016318 CAAATCCTGGTGCTCGCATTA 58.984 47.619 0.00 0.00 0.00 1.90
606 932 2.620115 CAAATCCTGGTGCTCGCATTAT 59.380 45.455 0.00 0.00 0.00 1.28
607 933 2.645838 ATCCTGGTGCTCGCATTATT 57.354 45.000 0.00 0.00 0.00 1.40
608 934 1.953559 TCCTGGTGCTCGCATTATTC 58.046 50.000 0.00 0.00 0.00 1.75
609 935 0.947244 CCTGGTGCTCGCATTATTCC 59.053 55.000 0.00 0.00 0.00 3.01
610 936 1.475751 CCTGGTGCTCGCATTATTCCT 60.476 52.381 0.00 0.00 0.00 3.36
611 937 1.600957 CTGGTGCTCGCATTATTCCTG 59.399 52.381 0.00 0.00 0.00 3.86
612 938 0.947244 GGTGCTCGCATTATTCCTGG 59.053 55.000 0.00 0.00 0.00 4.45
613 939 1.475034 GGTGCTCGCATTATTCCTGGA 60.475 52.381 0.00 0.00 0.00 3.86
614 940 2.498167 GTGCTCGCATTATTCCTGGAT 58.502 47.619 0.00 0.00 0.00 3.41
615 941 2.880890 GTGCTCGCATTATTCCTGGATT 59.119 45.455 0.00 0.00 0.00 3.01
616 942 3.316308 GTGCTCGCATTATTCCTGGATTT 59.684 43.478 0.00 0.00 0.00 2.17
617 943 4.515191 GTGCTCGCATTATTCCTGGATTTA 59.485 41.667 0.00 0.00 0.00 1.40
618 944 5.182001 GTGCTCGCATTATTCCTGGATTTAT 59.818 40.000 0.00 0.00 0.00 1.40
619 945 5.769662 TGCTCGCATTATTCCTGGATTTATT 59.230 36.000 0.00 0.00 0.00 1.40
620 946 6.265196 TGCTCGCATTATTCCTGGATTTATTT 59.735 34.615 0.00 0.00 0.00 1.40
621 947 6.803807 GCTCGCATTATTCCTGGATTTATTTC 59.196 38.462 0.00 0.00 0.00 2.17
622 948 7.522073 GCTCGCATTATTCCTGGATTTATTTCA 60.522 37.037 0.00 0.00 0.00 2.69
623 949 7.874940 TCGCATTATTCCTGGATTTATTTCAG 58.125 34.615 0.00 0.00 0.00 3.02
624 950 7.040478 TCGCATTATTCCTGGATTTATTTCAGG 60.040 37.037 0.00 0.00 46.91 3.86
632 958 6.076981 CTGGATTTATTTCAGGATTTCCGG 57.923 41.667 0.00 0.00 42.08 5.14
633 959 4.340950 TGGATTTATTTCAGGATTTCCGGC 59.659 41.667 0.00 0.00 42.08 6.13
634 960 4.537015 GATTTATTTCAGGATTTCCGGCG 58.463 43.478 0.00 0.00 42.08 6.46
635 961 2.992124 TATTTCAGGATTTCCGGCGA 57.008 45.000 9.30 0.00 42.08 5.54
636 962 2.348411 ATTTCAGGATTTCCGGCGAT 57.652 45.000 9.30 0.00 42.08 4.58
637 963 1.378531 TTTCAGGATTTCCGGCGATG 58.621 50.000 9.30 0.00 42.08 3.84
638 964 1.095228 TTCAGGATTTCCGGCGATGC 61.095 55.000 9.30 0.00 42.08 3.91
639 965 2.588877 AGGATTTCCGGCGATGCG 60.589 61.111 9.30 0.00 42.08 4.73
650 976 2.787249 CGATGCGCTTTCAGTGGG 59.213 61.111 9.73 0.00 0.00 4.61
651 977 1.741401 CGATGCGCTTTCAGTGGGA 60.741 57.895 9.73 0.00 0.00 4.37
652 978 1.699656 CGATGCGCTTTCAGTGGGAG 61.700 60.000 9.73 0.00 0.00 4.30
653 979 1.372087 GATGCGCTTTCAGTGGGAGG 61.372 60.000 9.73 0.00 0.00 4.30
654 980 1.841302 ATGCGCTTTCAGTGGGAGGA 61.841 55.000 9.73 0.00 0.00 3.71
655 981 1.743252 GCGCTTTCAGTGGGAGGAG 60.743 63.158 0.00 0.00 0.00 3.69
656 982 1.975327 CGCTTTCAGTGGGAGGAGA 59.025 57.895 0.00 0.00 0.00 3.71
657 983 0.390472 CGCTTTCAGTGGGAGGAGAC 60.390 60.000 0.00 0.00 0.00 3.36
658 984 0.390472 GCTTTCAGTGGGAGGAGACG 60.390 60.000 0.00 0.00 0.00 4.18
659 985 0.969894 CTTTCAGTGGGAGGAGACGT 59.030 55.000 0.00 0.00 0.00 4.34
660 986 1.344763 CTTTCAGTGGGAGGAGACGTT 59.655 52.381 0.00 0.00 0.00 3.99
661 987 0.966920 TTCAGTGGGAGGAGACGTTC 59.033 55.000 0.00 0.00 0.00 3.95
684 1010 4.883300 GACGACGAGGCGCCTACG 62.883 72.222 32.91 32.91 44.07 3.51
687 1013 4.849329 GACGAGGCGCCTACGGTG 62.849 72.222 34.97 23.88 40.57 4.94
689 1015 4.849329 CGAGGCGCCTACGGTGAC 62.849 72.222 32.97 14.51 42.50 3.67
692 1018 2.508663 GGCGCCTACGGTGACTTC 60.509 66.667 22.15 0.00 38.38 3.01
693 1019 2.879462 GCGCCTACGGTGACTTCG 60.879 66.667 0.00 0.00 40.57 3.79
694 1020 2.564975 CGCCTACGGTGACTTCGT 59.435 61.111 0.00 0.00 43.64 3.85
695 1021 1.796151 CGCCTACGGTGACTTCGTA 59.204 57.895 0.00 0.00 41.38 3.43
696 1022 0.168788 CGCCTACGGTGACTTCGTAA 59.831 55.000 0.00 0.00 41.62 3.18
697 1023 1.401409 CGCCTACGGTGACTTCGTAAA 60.401 52.381 0.00 0.00 41.62 2.01
698 1024 2.733227 CGCCTACGGTGACTTCGTAAAT 60.733 50.000 0.00 0.00 41.62 1.40
699 1025 2.856557 GCCTACGGTGACTTCGTAAATC 59.143 50.000 0.00 0.00 41.62 2.17
700 1026 3.428589 GCCTACGGTGACTTCGTAAATCT 60.429 47.826 0.00 0.00 41.62 2.40
701 1027 4.741342 CCTACGGTGACTTCGTAAATCTT 58.259 43.478 0.00 0.00 41.62 2.40
702 1028 5.677091 GCCTACGGTGACTTCGTAAATCTTA 60.677 44.000 0.00 0.00 41.62 2.10
703 1029 6.324819 CCTACGGTGACTTCGTAAATCTTAA 58.675 40.000 0.00 0.00 41.62 1.85
704 1030 6.471519 CCTACGGTGACTTCGTAAATCTTAAG 59.528 42.308 0.00 0.00 41.62 1.85
705 1031 6.017400 ACGGTGACTTCGTAAATCTTAAGA 57.983 37.500 7.82 7.82 39.22 2.10
706 1032 6.628185 ACGGTGACTTCGTAAATCTTAAGAT 58.372 36.000 12.37 12.37 39.22 2.40
707 1033 6.530534 ACGGTGACTTCGTAAATCTTAAGATG 59.469 38.462 18.61 6.47 39.22 2.90
708 1034 6.750501 CGGTGACTTCGTAAATCTTAAGATGA 59.249 38.462 18.61 8.72 34.49 2.92
709 1035 7.435488 CGGTGACTTCGTAAATCTTAAGATGAT 59.565 37.037 18.61 12.88 34.49 2.45
710 1036 9.745880 GGTGACTTCGTAAATCTTAAGATGATA 57.254 33.333 18.61 11.94 34.49 2.15
716 1042 8.965986 TCGTAAATCTTAAGATGATATGTCGG 57.034 34.615 18.61 2.76 34.49 4.79
717 1043 7.541091 TCGTAAATCTTAAGATGATATGTCGGC 59.459 37.037 18.61 2.74 34.49 5.54
718 1044 7.542477 CGTAAATCTTAAGATGATATGTCGGCT 59.458 37.037 18.61 0.00 34.49 5.52
719 1045 7.897575 AAATCTTAAGATGATATGTCGGCTC 57.102 36.000 18.61 0.00 34.49 4.70
720 1046 6.596309 ATCTTAAGATGATATGTCGGCTCA 57.404 37.500 17.26 0.00 32.68 4.26
721 1047 6.018589 TCTTAAGATGATATGTCGGCTCAG 57.981 41.667 0.00 0.00 0.00 3.35
722 1048 5.536538 TCTTAAGATGATATGTCGGCTCAGT 59.463 40.000 0.00 0.00 0.00 3.41
723 1049 3.932545 AGATGATATGTCGGCTCAGTC 57.067 47.619 0.00 0.00 0.00 3.51
724 1050 3.495331 AGATGATATGTCGGCTCAGTCT 58.505 45.455 0.00 0.00 0.00 3.24
725 1051 3.894427 AGATGATATGTCGGCTCAGTCTT 59.106 43.478 0.00 0.00 0.00 3.01
726 1052 4.343526 AGATGATATGTCGGCTCAGTCTTT 59.656 41.667 0.00 0.00 0.00 2.52
727 1053 4.046938 TGATATGTCGGCTCAGTCTTTC 57.953 45.455 0.00 0.00 0.00 2.62
728 1054 2.561733 TATGTCGGCTCAGTCTTTCG 57.438 50.000 0.00 0.00 0.00 3.46
729 1055 0.108615 ATGTCGGCTCAGTCTTTCGG 60.109 55.000 0.00 0.00 0.00 4.30
730 1056 1.176619 TGTCGGCTCAGTCTTTCGGA 61.177 55.000 0.00 0.00 0.00 4.55
731 1057 0.456995 GTCGGCTCAGTCTTTCGGAG 60.457 60.000 0.00 0.00 40.44 4.63
732 1058 1.153745 CGGCTCAGTCTTTCGGAGG 60.154 63.158 0.00 0.00 38.48 4.30
733 1059 1.878656 CGGCTCAGTCTTTCGGAGGT 61.879 60.000 0.00 0.00 38.48 3.85
734 1060 0.390472 GGCTCAGTCTTTCGGAGGTG 60.390 60.000 0.00 0.00 38.48 4.00
735 1061 1.016653 GCTCAGTCTTTCGGAGGTGC 61.017 60.000 0.00 0.00 38.48 5.01
736 1062 0.605589 CTCAGTCTTTCGGAGGTGCT 59.394 55.000 0.00 0.00 35.32 4.40
737 1063 0.603569 TCAGTCTTTCGGAGGTGCTC 59.396 55.000 0.00 0.00 0.00 4.26
738 1064 0.318441 CAGTCTTTCGGAGGTGCTCA 59.682 55.000 0.00 0.00 31.08 4.26
739 1065 1.066573 CAGTCTTTCGGAGGTGCTCAT 60.067 52.381 0.00 0.00 31.08 2.90
740 1066 2.166459 CAGTCTTTCGGAGGTGCTCATA 59.834 50.000 0.00 0.00 31.08 2.15
741 1067 2.428890 AGTCTTTCGGAGGTGCTCATAG 59.571 50.000 0.00 0.00 31.08 2.23
742 1068 1.757118 TCTTTCGGAGGTGCTCATAGG 59.243 52.381 0.00 0.00 31.08 2.57
743 1069 0.830648 TTTCGGAGGTGCTCATAGGG 59.169 55.000 0.00 0.00 31.08 3.53
744 1070 1.048724 TTCGGAGGTGCTCATAGGGG 61.049 60.000 0.00 0.00 31.08 4.79
745 1071 1.762460 CGGAGGTGCTCATAGGGGT 60.762 63.158 0.00 0.00 31.08 4.95
746 1072 0.469331 CGGAGGTGCTCATAGGGGTA 60.469 60.000 0.00 0.00 31.08 3.69
747 1073 1.343069 GGAGGTGCTCATAGGGGTAG 58.657 60.000 0.00 0.00 31.08 3.18
748 1074 1.343069 GAGGTGCTCATAGGGGTAGG 58.657 60.000 0.00 0.00 0.00 3.18
749 1075 0.104934 AGGTGCTCATAGGGGTAGGG 60.105 60.000 0.00 0.00 0.00 3.53
750 1076 0.400093 GGTGCTCATAGGGGTAGGGT 60.400 60.000 0.00 0.00 0.00 4.34
751 1077 0.759346 GTGCTCATAGGGGTAGGGTG 59.241 60.000 0.00 0.00 0.00 4.61
752 1078 0.341961 TGCTCATAGGGGTAGGGTGT 59.658 55.000 0.00 0.00 0.00 4.16
753 1079 0.759346 GCTCATAGGGGTAGGGTGTG 59.241 60.000 0.00 0.00 0.00 3.82
754 1080 0.759346 CTCATAGGGGTAGGGTGTGC 59.241 60.000 0.00 0.00 0.00 4.57
755 1081 1.046472 TCATAGGGGTAGGGTGTGCG 61.046 60.000 0.00 0.00 0.00 5.34
756 1082 1.002533 ATAGGGGTAGGGTGTGCGT 59.997 57.895 0.00 0.00 0.00 5.24
757 1083 1.335132 ATAGGGGTAGGGTGTGCGTG 61.335 60.000 0.00 0.00 0.00 5.34
758 1084 2.735151 TAGGGGTAGGGTGTGCGTGT 62.735 60.000 0.00 0.00 0.00 4.49
759 1085 2.358247 GGGTAGGGTGTGCGTGTG 60.358 66.667 0.00 0.00 0.00 3.82
760 1086 2.424302 GGTAGGGTGTGCGTGTGT 59.576 61.111 0.00 0.00 0.00 3.72
761 1087 1.959226 GGTAGGGTGTGCGTGTGTG 60.959 63.158 0.00 0.00 0.00 3.82
762 1088 2.280524 TAGGGTGTGCGTGTGTGC 60.281 61.111 0.00 0.00 0.00 4.57
765 1091 3.871574 GGTGTGCGTGTGTGCGTT 61.872 61.111 0.00 0.00 37.81 4.84
766 1092 2.350760 GTGTGCGTGTGTGCGTTC 60.351 61.111 0.00 0.00 37.81 3.95
767 1093 2.815647 TGTGCGTGTGTGCGTTCA 60.816 55.556 0.00 0.00 37.81 3.18
768 1094 2.176926 TGTGCGTGTGTGCGTTCAT 61.177 52.632 0.00 0.00 37.81 2.57
769 1095 0.876342 TGTGCGTGTGTGCGTTCATA 60.876 50.000 0.00 0.00 37.81 2.15
770 1096 0.179250 GTGCGTGTGTGCGTTCATAG 60.179 55.000 0.00 0.00 37.81 2.23
771 1097 1.288419 TGCGTGTGTGCGTTCATAGG 61.288 55.000 0.00 0.00 37.81 2.57
772 1098 1.966493 GCGTGTGTGCGTTCATAGGG 61.966 60.000 0.00 0.00 0.00 3.53
773 1099 1.358725 CGTGTGTGCGTTCATAGGGG 61.359 60.000 0.00 0.00 0.00 4.79
774 1100 0.321298 GTGTGTGCGTTCATAGGGGT 60.321 55.000 0.00 0.00 0.00 4.95
775 1101 0.321210 TGTGTGCGTTCATAGGGGTG 60.321 55.000 0.00 0.00 0.00 4.61
776 1102 0.036765 GTGTGCGTTCATAGGGGTGA 60.037 55.000 0.00 0.00 0.00 4.02
777 1103 0.249120 TGTGCGTTCATAGGGGTGAG 59.751 55.000 0.00 0.00 0.00 3.51
778 1104 0.249398 GTGCGTTCATAGGGGTGAGT 59.751 55.000 0.00 0.00 0.00 3.41
779 1105 0.249120 TGCGTTCATAGGGGTGAGTG 59.751 55.000 0.00 0.00 0.00 3.51
780 1106 0.249398 GCGTTCATAGGGGTGAGTGT 59.751 55.000 0.00 0.00 0.00 3.55
781 1107 1.479323 GCGTTCATAGGGGTGAGTGTA 59.521 52.381 0.00 0.00 0.00 2.90
782 1108 2.102588 GCGTTCATAGGGGTGAGTGTAT 59.897 50.000 0.00 0.00 0.00 2.29
783 1109 3.717707 CGTTCATAGGGGTGAGTGTATG 58.282 50.000 0.00 0.00 0.00 2.39
784 1110 3.467803 GTTCATAGGGGTGAGTGTATGC 58.532 50.000 0.00 0.00 0.00 3.14
785 1111 1.686587 TCATAGGGGTGAGTGTATGCG 59.313 52.381 0.00 0.00 0.00 4.73
786 1112 0.393077 ATAGGGGTGAGTGTATGCGC 59.607 55.000 0.00 0.00 0.00 6.09
787 1113 2.011741 TAGGGGTGAGTGTATGCGCG 62.012 60.000 0.00 0.00 0.00 6.86
788 1114 2.125673 GGGTGAGTGTATGCGCGT 60.126 61.111 8.43 7.55 0.00 6.01
789 1115 2.452813 GGGTGAGTGTATGCGCGTG 61.453 63.158 13.61 0.00 0.00 5.34
790 1116 1.736645 GGTGAGTGTATGCGCGTGT 60.737 57.895 13.61 0.00 0.00 4.49
791 1117 0.457166 GGTGAGTGTATGCGCGTGTA 60.457 55.000 13.61 0.00 0.00 2.90
792 1118 1.556564 GTGAGTGTATGCGCGTGTAT 58.443 50.000 13.61 4.63 0.00 2.29
793 1119 2.542205 GGTGAGTGTATGCGCGTGTATA 60.542 50.000 13.61 2.40 0.00 1.47
794 1120 3.305964 GTGAGTGTATGCGCGTGTATAT 58.694 45.455 13.61 0.00 0.00 0.86
795 1121 4.469552 GTGAGTGTATGCGCGTGTATATA 58.530 43.478 13.61 4.77 0.00 0.86
796 1122 4.913345 GTGAGTGTATGCGCGTGTATATAA 59.087 41.667 13.61 0.00 0.00 0.98
797 1123 5.059343 GTGAGTGTATGCGCGTGTATATAAG 59.941 44.000 13.61 0.00 0.00 1.73
798 1124 3.918591 AGTGTATGCGCGTGTATATAAGC 59.081 43.478 13.61 0.00 0.00 3.09
803 1129 2.471072 CGCGTGTATATAAGCGCTTG 57.529 50.000 32.23 13.89 46.56 4.01
804 1130 1.784856 CGCGTGTATATAAGCGCTTGT 59.215 47.619 32.23 27.59 46.56 3.16
805 1131 2.408487 CGCGTGTATATAAGCGCTTGTG 60.408 50.000 32.23 15.21 46.56 3.33
806 1132 2.538449 GCGTGTATATAAGCGCTTGTGT 59.462 45.455 32.23 25.25 45.48 3.72
807 1133 3.361724 GCGTGTATATAAGCGCTTGTGTC 60.362 47.826 32.23 18.77 45.48 3.67
808 1134 4.042398 CGTGTATATAAGCGCTTGTGTCT 58.958 43.478 32.23 16.45 0.00 3.41
809 1135 4.085568 CGTGTATATAAGCGCTTGTGTCTG 60.086 45.833 32.23 11.34 0.00 3.51
810 1136 4.804139 GTGTATATAAGCGCTTGTGTCTGT 59.196 41.667 32.23 12.93 0.00 3.41
811 1137 5.975344 GTGTATATAAGCGCTTGTGTCTGTA 59.025 40.000 32.23 10.34 0.00 2.74
812 1138 5.975344 TGTATATAAGCGCTTGTGTCTGTAC 59.025 40.000 32.23 21.30 0.00 2.90
813 1139 3.594603 ATAAGCGCTTGTGTCTGTACT 57.405 42.857 32.23 3.76 0.00 2.73
814 1140 4.713824 ATAAGCGCTTGTGTCTGTACTA 57.286 40.909 32.23 8.16 0.00 1.82
815 1141 3.380479 AAGCGCTTGTGTCTGTACTAA 57.620 42.857 24.40 0.00 0.00 2.24
816 1142 3.594603 AGCGCTTGTGTCTGTACTAAT 57.405 42.857 2.64 0.00 0.00 1.73
817 1143 3.254060 AGCGCTTGTGTCTGTACTAATG 58.746 45.455 2.64 0.00 0.00 1.90
818 1144 2.222819 GCGCTTGTGTCTGTACTAATGC 60.223 50.000 0.00 0.00 0.00 3.56
819 1145 3.254060 CGCTTGTGTCTGTACTAATGCT 58.746 45.455 0.00 0.00 0.00 3.79
820 1146 4.421058 CGCTTGTGTCTGTACTAATGCTA 58.579 43.478 0.00 0.00 0.00 3.49
821 1147 4.862574 CGCTTGTGTCTGTACTAATGCTAA 59.137 41.667 0.00 0.00 0.00 3.09
822 1148 5.347635 CGCTTGTGTCTGTACTAATGCTAAA 59.652 40.000 0.00 0.00 0.00 1.85
823 1149 6.128661 CGCTTGTGTCTGTACTAATGCTAAAA 60.129 38.462 0.00 0.00 0.00 1.52
824 1150 7.570507 CGCTTGTGTCTGTACTAATGCTAAAAA 60.571 37.037 0.00 0.00 0.00 1.94
844 1170 4.946784 AAAAATGGATCTGCAGTCGTAC 57.053 40.909 14.67 2.70 0.00 3.67
845 1171 2.604046 AATGGATCTGCAGTCGTACC 57.396 50.000 14.67 11.22 0.00 3.34
846 1172 0.385751 ATGGATCTGCAGTCGTACCG 59.614 55.000 14.67 0.00 0.00 4.02
861 1187 3.798878 TCGTACCGTATCTGAAGTCGTAG 59.201 47.826 0.00 0.00 0.00 3.51
914 1250 2.987149 CTGGCTACGCAGATATTAACCG 59.013 50.000 0.00 0.00 0.00 4.44
929 1265 2.562912 CCGACTTGGTGCATGTGC 59.437 61.111 0.00 0.00 42.50 4.57
948 1284 0.848942 CATCGCTCGATCTTGTTCCG 59.151 55.000 1.30 0.00 31.62 4.30
1041 1382 1.764571 CGGACTGGTTGAACCTCCCA 61.765 60.000 16.33 0.00 39.58 4.37
1050 1391 1.123077 TGAACCTCCCATCCGATCTG 58.877 55.000 0.00 0.00 0.00 2.90
1107 1448 2.499685 GGGCTCATAGCGTTCCGT 59.500 61.111 0.00 0.00 43.62 4.69
1234 1586 0.038618 CGTCTTCCATGTCCACGACA 60.039 55.000 0.00 0.00 46.90 4.35
1239 1591 0.830023 TCCATGTCCACGACACCTCA 60.830 55.000 0.00 0.00 45.65 3.86
1414 1769 1.444553 CTCGACTTCACGGACTGCC 60.445 63.158 0.00 0.00 0.00 4.85
1415 1770 2.432628 CGACTTCACGGACTGCCC 60.433 66.667 0.00 0.00 0.00 5.36
1602 1983 2.357760 GCCTACCACGACGGCAAA 60.358 61.111 0.00 0.00 43.25 3.68
1788 2172 0.756442 TGCCAAGCAAGCTGGTTCTT 60.756 50.000 0.00 0.00 35.69 2.52
1847 2237 2.632996 TCACCATCTTCGAGTTGGTCTT 59.367 45.455 11.70 0.00 42.96 3.01
2036 2432 1.852895 CTGCTACGATAACAAGTCGGC 59.147 52.381 0.00 0.00 43.06 5.54
2074 2470 1.001815 GCTGCTACAAAAACAAGCCGA 60.002 47.619 0.00 0.00 35.33 5.54
2106 2502 1.227002 GGCCTACTGCTACAGCGTC 60.227 63.158 0.00 0.00 45.83 5.19
2107 2503 1.586564 GCCTACTGCTACAGCGTCG 60.587 63.158 0.00 0.00 45.83 5.12
2109 2505 0.028242 CCTACTGCTACAGCGTCGAG 59.972 60.000 0.00 0.00 45.83 4.04
2199 2595 6.397217 AAGCCTAGTTGGTTTATTCCCTAA 57.603 37.500 0.00 0.00 37.49 2.69
2200 2596 6.592207 AGCCTAGTTGGTTTATTCCCTAAT 57.408 37.500 0.00 0.00 38.35 1.73
2201 2597 7.701257 AGCCTAGTTGGTTTATTCCCTAATA 57.299 36.000 0.00 0.00 38.35 0.98
2202 2598 8.109560 AGCCTAGTTGGTTTATTCCCTAATAA 57.890 34.615 0.00 0.00 35.44 1.40
2203 2599 8.218488 AGCCTAGTTGGTTTATTCCCTAATAAG 58.782 37.037 0.00 0.00 36.36 1.73
2204 2600 7.997223 GCCTAGTTGGTTTATTCCCTAATAAGT 59.003 37.037 0.00 0.00 36.36 2.24
2268 2664 9.411801 CGAATAGCTAGCTAGTTTCATTAATCA 57.588 33.333 27.42 3.60 31.45 2.57
2276 2672 6.816640 AGCTAGTTTCATTAATCACGTTAGCA 59.183 34.615 14.95 0.00 33.95 3.49
2277 2673 7.010552 AGCTAGTTTCATTAATCACGTTAGCAG 59.989 37.037 14.95 0.00 33.95 4.24
2294 2690 6.690957 CGTTAGCAGTTTTTGAGACAAATGAA 59.309 34.615 0.00 0.00 0.00 2.57
2299 2695 9.034544 AGCAGTTTTTGAGACAAATGAAATTAC 57.965 29.630 0.00 0.00 33.67 1.89
2317 2713 9.974980 TGAAATTACTTTTCTATTTGGTGGAAC 57.025 29.630 0.42 0.00 43.50 3.62
2329 2725 3.055144 GTGGAACCCGTAATCGTCC 57.945 57.895 0.00 0.00 35.01 4.79
2330 2726 0.247185 GTGGAACCCGTAATCGTCCA 59.753 55.000 0.00 0.00 37.39 4.02
2331 2727 1.134610 GTGGAACCCGTAATCGTCCAT 60.135 52.381 0.00 0.00 40.20 3.41
2332 2728 1.555992 TGGAACCCGTAATCGTCCATT 59.444 47.619 0.00 0.00 35.73 3.16
2333 2729 2.207590 GGAACCCGTAATCGTCCATTC 58.792 52.381 0.00 0.00 32.41 2.67
2334 2730 2.159000 GGAACCCGTAATCGTCCATTCT 60.159 50.000 0.00 0.00 32.41 2.40
2335 2731 2.596904 ACCCGTAATCGTCCATTCTG 57.403 50.000 0.00 0.00 35.01 3.02
2336 2732 1.829222 ACCCGTAATCGTCCATTCTGT 59.171 47.619 0.00 0.00 35.01 3.41
2337 2733 2.159142 ACCCGTAATCGTCCATTCTGTC 60.159 50.000 0.00 0.00 35.01 3.51
2338 2734 2.100916 CCCGTAATCGTCCATTCTGTCT 59.899 50.000 0.00 0.00 35.01 3.41
2339 2735 3.430374 CCCGTAATCGTCCATTCTGTCTT 60.430 47.826 0.00 0.00 35.01 3.01
2340 2736 4.181578 CCGTAATCGTCCATTCTGTCTTT 58.818 43.478 0.00 0.00 35.01 2.52
2341 2737 4.630069 CCGTAATCGTCCATTCTGTCTTTT 59.370 41.667 0.00 0.00 35.01 2.27
2342 2738 5.121768 CCGTAATCGTCCATTCTGTCTTTTT 59.878 40.000 0.00 0.00 35.01 1.94
2391 2787 9.533253 ACTCAAAATGTTTTTAGTTGGATCTTG 57.467 29.630 0.00 0.00 32.38 3.02
2392 2788 8.885494 TCAAAATGTTTTTAGTTGGATCTTGG 57.115 30.769 0.00 0.00 0.00 3.61
2393 2789 8.700051 TCAAAATGTTTTTAGTTGGATCTTGGA 58.300 29.630 0.00 0.00 0.00 3.53
2394 2790 9.492973 CAAAATGTTTTTAGTTGGATCTTGGAT 57.507 29.630 0.00 0.00 0.00 3.41
2395 2791 9.710900 AAAATGTTTTTAGTTGGATCTTGGATC 57.289 29.630 0.00 0.00 0.00 3.36
2396 2792 8.655935 AATGTTTTTAGTTGGATCTTGGATCT 57.344 30.769 7.35 0.00 0.00 2.75
2397 2793 8.655935 ATGTTTTTAGTTGGATCTTGGATCTT 57.344 30.769 7.35 0.00 0.00 2.40
2398 2794 7.885297 TGTTTTTAGTTGGATCTTGGATCTTG 58.115 34.615 7.35 0.00 0.00 3.02
2399 2795 7.039784 TGTTTTTAGTTGGATCTTGGATCTTGG 60.040 37.037 7.35 0.00 0.00 3.61
2400 2796 6.387192 TTTAGTTGGATCTTGGATCTTGGA 57.613 37.500 7.35 0.00 0.00 3.53
2401 2797 6.581388 TTAGTTGGATCTTGGATCTTGGAT 57.419 37.500 7.35 0.00 0.00 3.41
2402 2798 4.789807 AGTTGGATCTTGGATCTTGGATG 58.210 43.478 7.35 0.00 0.00 3.51
2403 2799 4.229123 AGTTGGATCTTGGATCTTGGATGT 59.771 41.667 7.35 0.00 0.00 3.06
2584 2991 1.395045 CCTGTCGCCTGCCAGATCTA 61.395 60.000 0.00 0.00 0.00 1.98
2593 3000 2.134287 GCCAGATCTAGACGCCCCA 61.134 63.158 0.00 0.00 0.00 4.96
2598 3005 1.686325 GATCTAGACGCCCCAGCCAA 61.686 60.000 0.00 0.00 34.57 4.52
2699 3106 2.044352 TCGGTCCGAGATCTGCCA 60.044 61.111 10.71 0.00 0.00 4.92
3033 3442 4.415150 CACCCCAGTGCGGCATCT 62.415 66.667 5.72 2.37 37.14 2.90
3046 3455 2.485795 GCATCTCCCGCTCTCTCGT 61.486 63.158 0.00 0.00 0.00 4.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
85 86 4.406173 CACGAGTGCGCGACCTCT 62.406 66.667 12.10 0.00 42.48 3.69
101 102 3.286751 GCTTCAACCACGGCAGCA 61.287 61.111 0.00 0.00 0.00 4.41
128 129 2.665000 CATGTGCTGGACCCGTCT 59.335 61.111 0.00 0.00 0.00 4.18
144 145 2.992689 TTGCCGCTCGTACTCCCA 60.993 61.111 0.00 0.00 0.00 4.37
186 187 2.657237 CGAGCCGGAGTTGGAAGT 59.343 61.111 5.05 0.00 0.00 3.01
244 570 1.298667 GCCCACTTCTTTCCCGCTA 59.701 57.895 0.00 0.00 0.00 4.26
310 636 4.918201 CCTTCAGATCCCGCCGCC 62.918 72.222 0.00 0.00 0.00 6.13
311 637 3.798954 CTCCTTCAGATCCCGCCGC 62.799 68.421 0.00 0.00 0.00 6.53
312 638 2.419198 CTCCTTCAGATCCCGCCG 59.581 66.667 0.00 0.00 0.00 6.46
313 639 1.338136 TTCCTCCTTCAGATCCCGCC 61.338 60.000 0.00 0.00 0.00 6.13
314 640 0.105778 CTTCCTCCTTCAGATCCCGC 59.894 60.000 0.00 0.00 0.00 6.13
315 641 1.781786 TCTTCCTCCTTCAGATCCCG 58.218 55.000 0.00 0.00 0.00 5.14
316 642 3.118075 CCTTTCTTCCTCCTTCAGATCCC 60.118 52.174 0.00 0.00 0.00 3.85
317 643 3.118075 CCCTTTCTTCCTCCTTCAGATCC 60.118 52.174 0.00 0.00 0.00 3.36
318 644 3.777522 TCCCTTTCTTCCTCCTTCAGATC 59.222 47.826 0.00 0.00 0.00 2.75
319 645 3.808189 TCCCTTTCTTCCTCCTTCAGAT 58.192 45.455 0.00 0.00 0.00 2.90
320 646 3.275848 TCCCTTTCTTCCTCCTTCAGA 57.724 47.619 0.00 0.00 0.00 3.27
321 647 3.521126 TGATCCCTTTCTTCCTCCTTCAG 59.479 47.826 0.00 0.00 0.00 3.02
322 648 3.521126 CTGATCCCTTTCTTCCTCCTTCA 59.479 47.826 0.00 0.00 0.00 3.02
323 649 3.118075 CCTGATCCCTTTCTTCCTCCTTC 60.118 52.174 0.00 0.00 0.00 3.46
324 650 2.849318 CCTGATCCCTTTCTTCCTCCTT 59.151 50.000 0.00 0.00 0.00 3.36
325 651 2.046447 TCCTGATCCCTTTCTTCCTCCT 59.954 50.000 0.00 0.00 0.00 3.69
326 652 2.437651 CTCCTGATCCCTTTCTTCCTCC 59.562 54.545 0.00 0.00 0.00 4.30
327 653 2.437651 CCTCCTGATCCCTTTCTTCCTC 59.562 54.545 0.00 0.00 0.00 3.71
328 654 2.046447 TCCTCCTGATCCCTTTCTTCCT 59.954 50.000 0.00 0.00 0.00 3.36
329 655 2.437651 CTCCTCCTGATCCCTTTCTTCC 59.562 54.545 0.00 0.00 0.00 3.46
330 656 2.158827 GCTCCTCCTGATCCCTTTCTTC 60.159 54.545 0.00 0.00 0.00 2.87
331 657 1.843206 GCTCCTCCTGATCCCTTTCTT 59.157 52.381 0.00 0.00 0.00 2.52
332 658 1.506025 GCTCCTCCTGATCCCTTTCT 58.494 55.000 0.00 0.00 0.00 2.52
333 659 0.105778 CGCTCCTCCTGATCCCTTTC 59.894 60.000 0.00 0.00 0.00 2.62
334 660 1.977293 GCGCTCCTCCTGATCCCTTT 61.977 60.000 0.00 0.00 0.00 3.11
335 661 2.439104 GCGCTCCTCCTGATCCCTT 61.439 63.158 0.00 0.00 0.00 3.95
336 662 2.841988 GCGCTCCTCCTGATCCCT 60.842 66.667 0.00 0.00 0.00 4.20
337 663 4.292178 CGCGCTCCTCCTGATCCC 62.292 72.222 5.56 0.00 0.00 3.85
338 664 3.206211 CTCGCGCTCCTCCTGATCC 62.206 68.421 5.56 0.00 0.00 3.36
339 665 2.334653 CTCGCGCTCCTCCTGATC 59.665 66.667 5.56 0.00 0.00 2.92
340 666 3.222855 CCTCGCGCTCCTCCTGAT 61.223 66.667 5.56 0.00 0.00 2.90
368 694 2.653022 GATCGATGCGAGGCGAAGC 61.653 63.158 0.54 0.00 46.98 3.86
369 695 2.360542 CGATCGATGCGAGGCGAAG 61.361 63.158 10.26 0.00 39.91 3.79
370 696 2.353492 CGATCGATGCGAGGCGAA 60.353 61.111 10.26 0.00 39.91 4.70
371 697 3.276846 TCGATCGATGCGAGGCGA 61.277 61.111 15.15 0.82 41.49 5.54
376 702 2.026157 GCCACTCGATCGATGCGA 59.974 61.111 19.78 10.98 41.13 5.10
377 703 3.032609 GGCCACTCGATCGATGCG 61.033 66.667 19.78 9.86 0.00 4.73
378 704 2.663188 GGGCCACTCGATCGATGC 60.663 66.667 19.78 19.93 0.00 3.91
379 705 2.355126 CGGGCCACTCGATCGATG 60.355 66.667 19.78 17.43 0.00 3.84
380 706 4.286320 GCGGGCCACTCGATCGAT 62.286 66.667 19.78 0.00 0.00 3.59
410 736 4.974989 ACGCCCGTGGAACCGTTC 62.975 66.667 2.37 2.37 0.00 3.95
426 752 2.031420 GGGAAGTGTTTAGAAACGGCAC 60.031 50.000 0.97 0.00 41.74 5.01
427 753 2.158726 AGGGAAGTGTTTAGAAACGGCA 60.159 45.455 0.97 0.00 41.74 5.69
428 754 2.501261 AGGGAAGTGTTTAGAAACGGC 58.499 47.619 0.97 0.00 41.74 5.68
429 755 4.891260 AGTAGGGAAGTGTTTAGAAACGG 58.109 43.478 0.97 0.00 41.74 4.44
430 756 8.543862 AATAAGTAGGGAAGTGTTTAGAAACG 57.456 34.615 0.97 0.00 41.74 3.60
432 758 9.643693 CGTAATAAGTAGGGAAGTGTTTAGAAA 57.356 33.333 0.00 0.00 0.00 2.52
433 759 9.023962 TCGTAATAAGTAGGGAAGTGTTTAGAA 57.976 33.333 0.00 0.00 0.00 2.10
434 760 8.579850 TCGTAATAAGTAGGGAAGTGTTTAGA 57.420 34.615 0.00 0.00 0.00 2.10
435 761 9.245962 CATCGTAATAAGTAGGGAAGTGTTTAG 57.754 37.037 0.00 0.00 0.00 1.85
436 762 8.970020 TCATCGTAATAAGTAGGGAAGTGTTTA 58.030 33.333 0.00 0.00 0.00 2.01
437 763 7.844009 TCATCGTAATAAGTAGGGAAGTGTTT 58.156 34.615 0.00 0.00 0.00 2.83
438 764 7.414222 TCATCGTAATAAGTAGGGAAGTGTT 57.586 36.000 0.00 0.00 0.00 3.32
439 765 7.414222 TTCATCGTAATAAGTAGGGAAGTGT 57.586 36.000 0.00 0.00 0.00 3.55
440 766 6.421202 GCTTCATCGTAATAAGTAGGGAAGTG 59.579 42.308 0.00 0.00 33.58 3.16
441 767 6.097839 TGCTTCATCGTAATAAGTAGGGAAGT 59.902 38.462 0.00 0.00 33.58 3.01
442 768 6.513180 TGCTTCATCGTAATAAGTAGGGAAG 58.487 40.000 0.00 0.00 34.04 3.46
443 769 6.474140 TGCTTCATCGTAATAAGTAGGGAA 57.526 37.500 0.00 0.00 0.00 3.97
444 770 6.665992 ATGCTTCATCGTAATAAGTAGGGA 57.334 37.500 0.00 0.00 0.00 4.20
445 771 9.436957 AATAATGCTTCATCGTAATAAGTAGGG 57.563 33.333 0.00 0.00 0.00 3.53
449 775 8.076178 GCCAAATAATGCTTCATCGTAATAAGT 58.924 33.333 0.00 0.00 0.00 2.24
450 776 7.538678 GGCCAAATAATGCTTCATCGTAATAAG 59.461 37.037 0.00 0.00 0.00 1.73
451 777 7.013750 TGGCCAAATAATGCTTCATCGTAATAA 59.986 33.333 0.61 0.00 0.00 1.40
452 778 6.488344 TGGCCAAATAATGCTTCATCGTAATA 59.512 34.615 0.61 0.00 0.00 0.98
453 779 5.301551 TGGCCAAATAATGCTTCATCGTAAT 59.698 36.000 0.61 0.00 0.00 1.89
454 780 4.642437 TGGCCAAATAATGCTTCATCGTAA 59.358 37.500 0.61 0.00 0.00 3.18
455 781 4.203226 TGGCCAAATAATGCTTCATCGTA 58.797 39.130 0.61 0.00 0.00 3.43
456 782 3.023119 TGGCCAAATAATGCTTCATCGT 58.977 40.909 0.61 0.00 0.00 3.73
457 783 3.067180 ACTGGCCAAATAATGCTTCATCG 59.933 43.478 7.01 0.00 0.00 3.84
458 784 4.340381 AGACTGGCCAAATAATGCTTCATC 59.660 41.667 7.01 0.00 0.00 2.92
459 785 4.284178 AGACTGGCCAAATAATGCTTCAT 58.716 39.130 7.01 0.00 0.00 2.57
460 786 3.700538 AGACTGGCCAAATAATGCTTCA 58.299 40.909 7.01 0.00 0.00 3.02
461 787 4.440663 GGAAGACTGGCCAAATAATGCTTC 60.441 45.833 7.01 11.29 0.00 3.86
462 788 3.448660 GGAAGACTGGCCAAATAATGCTT 59.551 43.478 7.01 2.51 0.00 3.91
463 789 3.026694 GGAAGACTGGCCAAATAATGCT 58.973 45.455 7.01 0.00 0.00 3.79
464 790 2.760092 TGGAAGACTGGCCAAATAATGC 59.240 45.455 7.01 0.00 0.00 3.56
465 791 4.019174 AGTGGAAGACTGGCCAAATAATG 58.981 43.478 7.01 0.00 35.63 1.90
466 792 4.273318 GAGTGGAAGACTGGCCAAATAAT 58.727 43.478 7.01 0.00 35.63 1.28
467 793 3.561313 GGAGTGGAAGACTGGCCAAATAA 60.561 47.826 7.01 0.00 35.63 1.40
468 794 2.026262 GGAGTGGAAGACTGGCCAAATA 60.026 50.000 7.01 0.00 35.63 1.40
469 795 1.272147 GGAGTGGAAGACTGGCCAAAT 60.272 52.381 7.01 0.00 35.63 2.32
470 796 0.110486 GGAGTGGAAGACTGGCCAAA 59.890 55.000 7.01 0.00 35.63 3.28
471 797 1.059584 TGGAGTGGAAGACTGGCCAA 61.060 55.000 7.01 0.00 35.63 4.52
472 798 1.461268 TGGAGTGGAAGACTGGCCA 60.461 57.895 4.71 4.71 33.83 5.36
473 799 1.003233 GTGGAGTGGAAGACTGGCC 60.003 63.158 0.00 0.00 33.83 5.36
474 800 1.003233 GGTGGAGTGGAAGACTGGC 60.003 63.158 0.00 0.00 33.83 4.85
475 801 1.127567 TGGGTGGAGTGGAAGACTGG 61.128 60.000 0.00 0.00 33.83 4.00
476 802 0.764890 TTGGGTGGAGTGGAAGACTG 59.235 55.000 0.00 0.00 33.83 3.51
477 803 1.059913 CTTGGGTGGAGTGGAAGACT 58.940 55.000 0.00 0.00 37.76 3.24
478 804 0.765510 ACTTGGGTGGAGTGGAAGAC 59.234 55.000 0.00 0.00 0.00 3.01
479 805 1.056660 GACTTGGGTGGAGTGGAAGA 58.943 55.000 0.00 0.00 0.00 2.87
480 806 1.059913 AGACTTGGGTGGAGTGGAAG 58.940 55.000 0.00 0.00 0.00 3.46
481 807 0.764890 CAGACTTGGGTGGAGTGGAA 59.235 55.000 0.00 0.00 0.00 3.53
482 808 0.399949 ACAGACTTGGGTGGAGTGGA 60.400 55.000 0.00 0.00 0.00 4.02
483 809 0.474184 AACAGACTTGGGTGGAGTGG 59.526 55.000 0.00 0.00 0.00 4.00
484 810 2.348411 AAACAGACTTGGGTGGAGTG 57.652 50.000 0.00 0.00 0.00 3.51
485 811 2.025321 ACAAAACAGACTTGGGTGGAGT 60.025 45.455 0.00 0.00 0.00 3.85
486 812 2.654863 ACAAAACAGACTTGGGTGGAG 58.345 47.619 0.00 0.00 0.00 3.86
487 813 2.818751 ACAAAACAGACTTGGGTGGA 57.181 45.000 0.00 0.00 0.00 4.02
488 814 3.885724 AAACAAAACAGACTTGGGTGG 57.114 42.857 0.00 0.00 0.00 4.61
489 815 7.201600 CCATTTTAAACAAAACAGACTTGGGTG 60.202 37.037 0.00 0.00 0.00 4.61
490 816 6.821160 CCATTTTAAACAAAACAGACTTGGGT 59.179 34.615 0.00 0.00 0.00 4.51
491 817 7.044798 TCCATTTTAAACAAAACAGACTTGGG 58.955 34.615 0.00 0.00 0.00 4.12
492 818 8.661352 ATCCATTTTAAACAAAACAGACTTGG 57.339 30.769 0.00 0.00 0.00 3.61
493 819 9.533253 AGATCCATTTTAAACAAAACAGACTTG 57.467 29.630 0.00 0.00 0.00 3.16
496 822 9.959749 TGTAGATCCATTTTAAACAAAACAGAC 57.040 29.630 0.00 0.00 0.00 3.51
498 824 9.410556 CCTGTAGATCCATTTTAAACAAAACAG 57.589 33.333 0.00 0.00 0.00 3.16
499 825 7.870445 GCCTGTAGATCCATTTTAAACAAAACA 59.130 33.333 0.00 0.00 0.00 2.83
500 826 7.061789 CGCCTGTAGATCCATTTTAAACAAAAC 59.938 37.037 0.00 0.00 0.00 2.43
501 827 7.040340 TCGCCTGTAGATCCATTTTAAACAAAA 60.040 33.333 0.00 0.00 0.00 2.44
502 828 6.431543 TCGCCTGTAGATCCATTTTAAACAAA 59.568 34.615 0.00 0.00 0.00 2.83
503 829 5.941058 TCGCCTGTAGATCCATTTTAAACAA 59.059 36.000 0.00 0.00 0.00 2.83
504 830 5.353123 GTCGCCTGTAGATCCATTTTAAACA 59.647 40.000 0.00 0.00 0.00 2.83
505 831 5.220796 GGTCGCCTGTAGATCCATTTTAAAC 60.221 44.000 0.00 0.00 0.00 2.01
506 832 4.879545 GGTCGCCTGTAGATCCATTTTAAA 59.120 41.667 0.00 0.00 0.00 1.52
507 833 4.448210 GGTCGCCTGTAGATCCATTTTAA 58.552 43.478 0.00 0.00 0.00 1.52
508 834 3.181458 GGGTCGCCTGTAGATCCATTTTA 60.181 47.826 0.00 0.00 38.72 1.52
509 835 2.421529 GGGTCGCCTGTAGATCCATTTT 60.422 50.000 0.00 0.00 38.72 1.82
510 836 1.141053 GGGTCGCCTGTAGATCCATTT 59.859 52.381 0.00 0.00 38.72 2.32
511 837 0.759346 GGGTCGCCTGTAGATCCATT 59.241 55.000 0.00 0.00 38.72 3.16
512 838 0.398522 TGGGTCGCCTGTAGATCCAT 60.399 55.000 0.00 0.00 43.41 3.41
513 839 0.616395 TTGGGTCGCCTGTAGATCCA 60.616 55.000 0.00 0.00 46.30 3.41
514 840 0.179081 GTTGGGTCGCCTGTAGATCC 60.179 60.000 0.00 0.00 39.31 3.36
515 841 0.179081 GGTTGGGTCGCCTGTAGATC 60.179 60.000 0.00 0.00 0.00 2.75
516 842 0.617820 AGGTTGGGTCGCCTGTAGAT 60.618 55.000 0.00 0.00 33.13 1.98
517 843 1.229082 AGGTTGGGTCGCCTGTAGA 60.229 57.895 0.00 0.00 33.13 2.59
518 844 1.079127 CAGGTTGGGTCGCCTGTAG 60.079 63.158 2.66 0.00 45.28 2.74
519 845 3.065306 CAGGTTGGGTCGCCTGTA 58.935 61.111 2.66 0.00 45.28 2.74
522 848 3.953775 CCACAGGTTGGGTCGCCT 61.954 66.667 0.00 0.00 42.54 5.52
523 849 3.785122 AACCACAGGTTGGGTCGCC 62.785 63.158 0.00 0.00 45.22 5.54
524 850 2.203294 AACCACAGGTTGGGTCGC 60.203 61.111 0.00 0.00 45.22 5.19
525 851 0.884704 CTCAACCACAGGTTGGGTCG 60.885 60.000 24.17 10.23 45.22 4.79
526 852 3.021451 CTCAACCACAGGTTGGGTC 57.979 57.895 24.17 0.00 45.22 4.46
532 858 2.305927 CCTAACCATCTCAACCACAGGT 59.694 50.000 0.00 0.00 37.65 4.00
533 859 2.305927 ACCTAACCATCTCAACCACAGG 59.694 50.000 0.00 0.00 0.00 4.00
534 860 3.338249 CACCTAACCATCTCAACCACAG 58.662 50.000 0.00 0.00 0.00 3.66
535 861 2.039746 CCACCTAACCATCTCAACCACA 59.960 50.000 0.00 0.00 0.00 4.17
536 862 2.304761 TCCACCTAACCATCTCAACCAC 59.695 50.000 0.00 0.00 0.00 4.16
537 863 2.304761 GTCCACCTAACCATCTCAACCA 59.695 50.000 0.00 0.00 0.00 3.67
538 864 2.304761 TGTCCACCTAACCATCTCAACC 59.695 50.000 0.00 0.00 0.00 3.77
539 865 3.008049 ACTGTCCACCTAACCATCTCAAC 59.992 47.826 0.00 0.00 0.00 3.18
540 866 3.007940 CACTGTCCACCTAACCATCTCAA 59.992 47.826 0.00 0.00 0.00 3.02
541 867 2.567169 CACTGTCCACCTAACCATCTCA 59.433 50.000 0.00 0.00 0.00 3.27
542 868 2.093447 CCACTGTCCACCTAACCATCTC 60.093 54.545 0.00 0.00 0.00 2.75
543 869 1.909302 CCACTGTCCACCTAACCATCT 59.091 52.381 0.00 0.00 0.00 2.90
544 870 1.628846 ACCACTGTCCACCTAACCATC 59.371 52.381 0.00 0.00 0.00 3.51
545 871 1.742308 ACCACTGTCCACCTAACCAT 58.258 50.000 0.00 0.00 0.00 3.55
546 872 2.402182 TACCACTGTCCACCTAACCA 57.598 50.000 0.00 0.00 0.00 3.67
547 873 2.169978 GGATACCACTGTCCACCTAACC 59.830 54.545 0.00 0.00 34.57 2.85
548 874 3.538634 GGATACCACTGTCCACCTAAC 57.461 52.381 0.00 0.00 34.57 2.34
563 889 1.613061 CCTGGTGGGTTGGGGATAC 59.387 63.158 0.00 0.00 0.00 2.24
564 890 4.179896 CCTGGTGGGTTGGGGATA 57.820 61.111 0.00 0.00 0.00 2.59
574 900 1.549203 CAGGATTTGAACCCTGGTGG 58.451 55.000 0.00 0.00 44.68 4.61
579 905 0.779997 AGCACCAGGATTTGAACCCT 59.220 50.000 0.00 0.00 0.00 4.34
580 906 1.177401 GAGCACCAGGATTTGAACCC 58.823 55.000 0.00 0.00 0.00 4.11
581 907 0.804989 CGAGCACCAGGATTTGAACC 59.195 55.000 0.00 0.00 0.00 3.62
582 908 0.169009 GCGAGCACCAGGATTTGAAC 59.831 55.000 0.00 0.00 0.00 3.18
583 909 0.250684 TGCGAGCACCAGGATTTGAA 60.251 50.000 0.00 0.00 0.00 2.69
584 910 0.035152 ATGCGAGCACCAGGATTTGA 60.035 50.000 0.00 0.00 0.00 2.69
585 911 0.813184 AATGCGAGCACCAGGATTTG 59.187 50.000 0.00 0.00 0.00 2.32
586 912 2.418368 TAATGCGAGCACCAGGATTT 57.582 45.000 0.00 0.00 31.11 2.17
587 913 2.645838 ATAATGCGAGCACCAGGATT 57.354 45.000 0.00 0.00 33.17 3.01
588 914 2.498167 GAATAATGCGAGCACCAGGAT 58.502 47.619 0.00 0.00 0.00 3.24
589 915 1.475034 GGAATAATGCGAGCACCAGGA 60.475 52.381 0.00 0.00 0.00 3.86
590 916 0.947244 GGAATAATGCGAGCACCAGG 59.053 55.000 0.00 0.00 0.00 4.45
591 917 1.600957 CAGGAATAATGCGAGCACCAG 59.399 52.381 0.00 0.00 0.00 4.00
592 918 1.667236 CAGGAATAATGCGAGCACCA 58.333 50.000 0.00 0.00 0.00 4.17
593 919 0.947244 CCAGGAATAATGCGAGCACC 59.053 55.000 0.00 0.00 0.00 5.01
594 920 1.953559 TCCAGGAATAATGCGAGCAC 58.046 50.000 0.00 0.00 0.00 4.40
595 921 2.936919 ATCCAGGAATAATGCGAGCA 57.063 45.000 0.00 0.00 0.00 4.26
596 922 5.886960 ATAAATCCAGGAATAATGCGAGC 57.113 39.130 0.00 0.00 0.00 5.03
597 923 7.874940 TGAAATAAATCCAGGAATAATGCGAG 58.125 34.615 0.00 0.00 0.00 5.03
598 924 7.815840 TGAAATAAATCCAGGAATAATGCGA 57.184 32.000 0.00 0.00 0.00 5.10
608 934 5.010012 CCGGAAATCCTGAAATAAATCCAGG 59.990 44.000 0.00 0.00 46.64 4.45
609 935 5.507985 GCCGGAAATCCTGAAATAAATCCAG 60.508 44.000 5.05 0.00 0.00 3.86
610 936 4.340950 GCCGGAAATCCTGAAATAAATCCA 59.659 41.667 5.05 0.00 0.00 3.41
611 937 4.556699 CGCCGGAAATCCTGAAATAAATCC 60.557 45.833 5.05 0.00 0.00 3.01
612 938 4.274950 TCGCCGGAAATCCTGAAATAAATC 59.725 41.667 5.05 0.00 0.00 2.17
613 939 4.204012 TCGCCGGAAATCCTGAAATAAAT 58.796 39.130 5.05 0.00 0.00 1.40
614 940 3.611970 TCGCCGGAAATCCTGAAATAAA 58.388 40.909 5.05 0.00 0.00 1.40
615 941 3.269538 TCGCCGGAAATCCTGAAATAA 57.730 42.857 5.05 0.00 0.00 1.40
616 942 2.992124 TCGCCGGAAATCCTGAAATA 57.008 45.000 5.05 0.00 0.00 1.40
617 943 1.949525 CATCGCCGGAAATCCTGAAAT 59.050 47.619 5.05 0.00 0.00 2.17
618 944 1.378531 CATCGCCGGAAATCCTGAAA 58.621 50.000 5.05 0.00 0.00 2.69
619 945 1.095228 GCATCGCCGGAAATCCTGAA 61.095 55.000 5.05 0.00 0.00 3.02
620 946 1.523711 GCATCGCCGGAAATCCTGA 60.524 57.895 5.05 0.00 0.00 3.86
621 947 2.885676 CGCATCGCCGGAAATCCTG 61.886 63.158 5.05 0.00 0.00 3.86
622 948 2.588877 CGCATCGCCGGAAATCCT 60.589 61.111 5.05 0.00 0.00 3.24
633 959 1.699656 CTCCCACTGAAAGCGCATCG 61.700 60.000 11.47 6.82 37.60 3.84
634 960 1.372087 CCTCCCACTGAAAGCGCATC 61.372 60.000 11.47 8.39 37.60 3.91
635 961 1.377725 CCTCCCACTGAAAGCGCAT 60.378 57.895 11.47 0.00 37.60 4.73
636 962 2.032528 CCTCCCACTGAAAGCGCA 59.967 61.111 11.47 0.00 37.60 6.09
637 963 1.743252 CTCCTCCCACTGAAAGCGC 60.743 63.158 0.00 0.00 37.60 5.92
638 964 0.390472 GTCTCCTCCCACTGAAAGCG 60.390 60.000 0.00 0.00 37.60 4.68
639 965 0.390472 CGTCTCCTCCCACTGAAAGC 60.390 60.000 0.00 0.00 37.60 3.51
640 966 0.969894 ACGTCTCCTCCCACTGAAAG 59.030 55.000 0.00 0.00 42.29 2.62
641 967 1.343465 GAACGTCTCCTCCCACTGAAA 59.657 52.381 0.00 0.00 0.00 2.69
642 968 0.966920 GAACGTCTCCTCCCACTGAA 59.033 55.000 0.00 0.00 0.00 3.02
643 969 0.898789 GGAACGTCTCCTCCCACTGA 60.899 60.000 8.87 0.00 41.61 3.41
644 970 1.592223 GGAACGTCTCCTCCCACTG 59.408 63.158 8.87 0.00 41.61 3.66
645 971 4.115270 GGAACGTCTCCTCCCACT 57.885 61.111 8.87 0.00 41.61 4.00
666 992 4.883300 GTAGGCGCCTCGTCGTCG 62.883 72.222 36.73 0.00 39.34 5.12
667 993 4.883300 CGTAGGCGCCTCGTCGTC 62.883 72.222 36.73 15.88 36.23 4.20
680 1006 7.246311 TCTTAAGATTTACGAAGTCACCGTAG 58.754 38.462 0.00 0.00 43.93 3.51
681 1007 7.144722 TCTTAAGATTTACGAAGTCACCGTA 57.855 36.000 0.00 0.00 43.93 4.02
682 1008 6.017400 TCTTAAGATTTACGAAGTCACCGT 57.983 37.500 0.00 0.00 43.93 4.83
683 1009 6.750501 TCATCTTAAGATTTACGAAGTCACCG 59.249 38.462 15.49 0.00 35.39 4.94
684 1010 8.649973 ATCATCTTAAGATTTACGAAGTCACC 57.350 34.615 15.49 0.00 35.39 4.02
690 1016 9.406828 CCGACATATCATCTTAAGATTTACGAA 57.593 33.333 15.49 0.00 31.21 3.85
691 1017 7.541091 GCCGACATATCATCTTAAGATTTACGA 59.459 37.037 15.49 10.07 31.21 3.43
692 1018 7.542477 AGCCGACATATCATCTTAAGATTTACG 59.458 37.037 15.49 12.88 31.21 3.18
693 1019 8.764524 AGCCGACATATCATCTTAAGATTTAC 57.235 34.615 15.49 3.16 31.21 2.01
694 1020 8.585018 TGAGCCGACATATCATCTTAAGATTTA 58.415 33.333 15.49 10.60 31.21 1.40
695 1021 7.445121 TGAGCCGACATATCATCTTAAGATTT 58.555 34.615 15.49 8.78 31.21 2.17
696 1022 6.997655 TGAGCCGACATATCATCTTAAGATT 58.002 36.000 15.49 5.12 31.21 2.40
697 1023 6.210385 ACTGAGCCGACATATCATCTTAAGAT 59.790 38.462 12.37 12.37 34.56 2.40
698 1024 5.536538 ACTGAGCCGACATATCATCTTAAGA 59.463 40.000 7.82 7.82 0.00 2.10
699 1025 5.777802 ACTGAGCCGACATATCATCTTAAG 58.222 41.667 0.00 0.00 0.00 1.85
700 1026 5.536538 AGACTGAGCCGACATATCATCTTAA 59.463 40.000 0.00 0.00 0.00 1.85
701 1027 5.073428 AGACTGAGCCGACATATCATCTTA 58.927 41.667 0.00 0.00 0.00 2.10
702 1028 3.894427 AGACTGAGCCGACATATCATCTT 59.106 43.478 0.00 0.00 0.00 2.40
703 1029 3.495331 AGACTGAGCCGACATATCATCT 58.505 45.455 0.00 0.00 0.00 2.90
704 1030 3.932545 AGACTGAGCCGACATATCATC 57.067 47.619 0.00 0.00 0.00 2.92
705 1031 4.626042 GAAAGACTGAGCCGACATATCAT 58.374 43.478 0.00 0.00 0.00 2.45
706 1032 3.489229 CGAAAGACTGAGCCGACATATCA 60.489 47.826 0.00 0.00 0.00 2.15
707 1033 3.046390 CGAAAGACTGAGCCGACATATC 58.954 50.000 0.00 0.00 0.00 1.63
708 1034 2.223829 CCGAAAGACTGAGCCGACATAT 60.224 50.000 0.00 0.00 0.00 1.78
709 1035 1.134367 CCGAAAGACTGAGCCGACATA 59.866 52.381 0.00 0.00 0.00 2.29
710 1036 0.108615 CCGAAAGACTGAGCCGACAT 60.109 55.000 0.00 0.00 0.00 3.06
711 1037 1.176619 TCCGAAAGACTGAGCCGACA 61.177 55.000 0.00 0.00 0.00 4.35
712 1038 0.456995 CTCCGAAAGACTGAGCCGAC 60.457 60.000 0.00 0.00 0.00 4.79
713 1039 1.595993 CCTCCGAAAGACTGAGCCGA 61.596 60.000 0.00 0.00 0.00 5.54
714 1040 1.153745 CCTCCGAAAGACTGAGCCG 60.154 63.158 0.00 0.00 0.00 5.52
715 1041 0.390472 CACCTCCGAAAGACTGAGCC 60.390 60.000 0.00 0.00 0.00 4.70
716 1042 1.016653 GCACCTCCGAAAGACTGAGC 61.017 60.000 0.00 0.00 0.00 4.26
717 1043 0.605589 AGCACCTCCGAAAGACTGAG 59.394 55.000 0.00 0.00 0.00 3.35
718 1044 0.603569 GAGCACCTCCGAAAGACTGA 59.396 55.000 0.00 0.00 0.00 3.41
719 1045 0.318441 TGAGCACCTCCGAAAGACTG 59.682 55.000 0.00 0.00 0.00 3.51
720 1046 1.270907 ATGAGCACCTCCGAAAGACT 58.729 50.000 0.00 0.00 0.00 3.24
721 1047 2.482142 CCTATGAGCACCTCCGAAAGAC 60.482 54.545 0.00 0.00 0.00 3.01
722 1048 1.757118 CCTATGAGCACCTCCGAAAGA 59.243 52.381 0.00 0.00 0.00 2.52
723 1049 1.202580 CCCTATGAGCACCTCCGAAAG 60.203 57.143 0.00 0.00 0.00 2.62
724 1050 0.830648 CCCTATGAGCACCTCCGAAA 59.169 55.000 0.00 0.00 0.00 3.46
725 1051 1.048724 CCCCTATGAGCACCTCCGAA 61.049 60.000 0.00 0.00 0.00 4.30
726 1052 1.457643 CCCCTATGAGCACCTCCGA 60.458 63.158 0.00 0.00 0.00 4.55
727 1053 0.469331 TACCCCTATGAGCACCTCCG 60.469 60.000 0.00 0.00 0.00 4.63
728 1054 1.343069 CTACCCCTATGAGCACCTCC 58.657 60.000 0.00 0.00 0.00 4.30
729 1055 1.343069 CCTACCCCTATGAGCACCTC 58.657 60.000 0.00 0.00 0.00 3.85
730 1056 0.104934 CCCTACCCCTATGAGCACCT 60.105 60.000 0.00 0.00 0.00 4.00
731 1057 0.400093 ACCCTACCCCTATGAGCACC 60.400 60.000 0.00 0.00 0.00 5.01
732 1058 0.759346 CACCCTACCCCTATGAGCAC 59.241 60.000 0.00 0.00 0.00 4.40
733 1059 0.341961 ACACCCTACCCCTATGAGCA 59.658 55.000 0.00 0.00 0.00 4.26
734 1060 0.759346 CACACCCTACCCCTATGAGC 59.241 60.000 0.00 0.00 0.00 4.26
735 1061 0.759346 GCACACCCTACCCCTATGAG 59.241 60.000 0.00 0.00 0.00 2.90
736 1062 1.046472 CGCACACCCTACCCCTATGA 61.046 60.000 0.00 0.00 0.00 2.15
737 1063 1.335132 ACGCACACCCTACCCCTATG 61.335 60.000 0.00 0.00 0.00 2.23
738 1064 1.002533 ACGCACACCCTACCCCTAT 59.997 57.895 0.00 0.00 0.00 2.57
739 1065 1.985662 CACGCACACCCTACCCCTA 60.986 63.158 0.00 0.00 0.00 3.53
740 1066 3.319198 CACGCACACCCTACCCCT 61.319 66.667 0.00 0.00 0.00 4.79
741 1067 3.633116 ACACGCACACCCTACCCC 61.633 66.667 0.00 0.00 0.00 4.95
742 1068 2.358247 CACACGCACACCCTACCC 60.358 66.667 0.00 0.00 0.00 3.69
743 1069 1.959226 CACACACGCACACCCTACC 60.959 63.158 0.00 0.00 0.00 3.18
744 1070 2.604174 GCACACACGCACACCCTAC 61.604 63.158 0.00 0.00 0.00 3.18
745 1071 2.280524 GCACACACGCACACCCTA 60.281 61.111 0.00 0.00 0.00 3.53
748 1074 3.783588 GAACGCACACACGCACACC 62.784 63.158 0.00 0.00 36.19 4.16
749 1075 2.350760 GAACGCACACACGCACAC 60.351 61.111 0.00 0.00 36.19 3.82
750 1076 0.876342 TATGAACGCACACACGCACA 60.876 50.000 0.00 0.00 36.19 4.57
751 1077 0.179250 CTATGAACGCACACACGCAC 60.179 55.000 0.00 0.00 36.19 5.34
752 1078 1.288419 CCTATGAACGCACACACGCA 61.288 55.000 0.00 0.00 36.19 5.24
753 1079 1.419922 CCTATGAACGCACACACGC 59.580 57.895 0.00 0.00 36.19 5.34
754 1080 1.358725 CCCCTATGAACGCACACACG 61.359 60.000 0.00 0.00 39.50 4.49
755 1081 0.321298 ACCCCTATGAACGCACACAC 60.321 55.000 0.00 0.00 0.00 3.82
756 1082 0.321210 CACCCCTATGAACGCACACA 60.321 55.000 0.00 0.00 0.00 3.72
757 1083 0.036765 TCACCCCTATGAACGCACAC 60.037 55.000 0.00 0.00 0.00 3.82
758 1084 0.249120 CTCACCCCTATGAACGCACA 59.751 55.000 0.00 0.00 0.00 4.57
759 1085 0.249398 ACTCACCCCTATGAACGCAC 59.751 55.000 0.00 0.00 0.00 5.34
760 1086 0.249120 CACTCACCCCTATGAACGCA 59.751 55.000 0.00 0.00 0.00 5.24
761 1087 0.249398 ACACTCACCCCTATGAACGC 59.751 55.000 0.00 0.00 0.00 4.84
762 1088 3.717707 CATACACTCACCCCTATGAACG 58.282 50.000 0.00 0.00 0.00 3.95
763 1089 3.467803 GCATACACTCACCCCTATGAAC 58.532 50.000 0.00 0.00 0.00 3.18
764 1090 2.102420 CGCATACACTCACCCCTATGAA 59.898 50.000 0.00 0.00 0.00 2.57
765 1091 1.686587 CGCATACACTCACCCCTATGA 59.313 52.381 0.00 0.00 0.00 2.15
766 1092 1.873903 GCGCATACACTCACCCCTATG 60.874 57.143 0.30 0.00 0.00 2.23
767 1093 0.393077 GCGCATACACTCACCCCTAT 59.607 55.000 0.30 0.00 0.00 2.57
768 1094 1.820581 GCGCATACACTCACCCCTA 59.179 57.895 0.30 0.00 0.00 3.53
769 1095 2.584608 GCGCATACACTCACCCCT 59.415 61.111 0.30 0.00 0.00 4.79
770 1096 2.890474 CGCGCATACACTCACCCC 60.890 66.667 8.75 0.00 0.00 4.95
771 1097 2.125673 ACGCGCATACACTCACCC 60.126 61.111 5.73 0.00 0.00 4.61
772 1098 0.457166 TACACGCGCATACACTCACC 60.457 55.000 5.73 0.00 0.00 4.02
773 1099 1.556564 ATACACGCGCATACACTCAC 58.443 50.000 5.73 0.00 0.00 3.51
774 1100 3.636282 ATATACACGCGCATACACTCA 57.364 42.857 5.73 0.00 0.00 3.41
775 1101 4.030306 GCTTATATACACGCGCATACACTC 59.970 45.833 5.73 0.00 0.00 3.51
776 1102 3.918591 GCTTATATACACGCGCATACACT 59.081 43.478 5.73 0.00 0.00 3.55
777 1103 3.241239 CGCTTATATACACGCGCATACAC 60.241 47.826 5.73 0.00 39.11 2.90
778 1104 2.912345 CGCTTATATACACGCGCATACA 59.088 45.455 5.73 0.00 39.11 2.29
779 1105 3.532213 CGCTTATATACACGCGCATAC 57.468 47.619 5.73 0.00 39.11 2.39
786 1112 4.042398 AGACACAAGCGCTTATATACACG 58.958 43.478 24.55 10.39 0.00 4.49
787 1113 4.804139 ACAGACACAAGCGCTTATATACAC 59.196 41.667 24.55 10.53 0.00 2.90
788 1114 5.006153 ACAGACACAAGCGCTTATATACA 57.994 39.130 24.55 0.00 0.00 2.29
789 1115 6.207213 AGTACAGACACAAGCGCTTATATAC 58.793 40.000 24.55 16.63 0.00 1.47
790 1116 6.387041 AGTACAGACACAAGCGCTTATATA 57.613 37.500 24.55 5.89 0.00 0.86
791 1117 5.263968 AGTACAGACACAAGCGCTTATAT 57.736 39.130 24.55 10.78 0.00 0.86
792 1118 4.713824 AGTACAGACACAAGCGCTTATA 57.286 40.909 24.55 4.12 0.00 0.98
793 1119 3.594603 AGTACAGACACAAGCGCTTAT 57.405 42.857 24.55 9.39 0.00 1.73
794 1120 4.508461 TTAGTACAGACACAAGCGCTTA 57.492 40.909 24.55 0.72 0.00 3.09
795 1121 3.380479 TTAGTACAGACACAAGCGCTT 57.620 42.857 18.98 18.98 0.00 4.68
796 1122 3.254060 CATTAGTACAGACACAAGCGCT 58.746 45.455 2.64 2.64 0.00 5.92
797 1123 2.222819 GCATTAGTACAGACACAAGCGC 60.223 50.000 0.00 0.00 0.00 5.92
798 1124 3.254060 AGCATTAGTACAGACACAAGCG 58.746 45.455 0.00 0.00 0.00 4.68
799 1125 6.721571 TTTAGCATTAGTACAGACACAAGC 57.278 37.500 0.00 0.00 0.00 4.01
823 1149 3.689649 GGTACGACTGCAGATCCATTTTT 59.310 43.478 23.35 0.00 0.00 1.94
824 1150 3.270877 GGTACGACTGCAGATCCATTTT 58.729 45.455 23.35 0.00 0.00 1.82
825 1151 2.906354 GGTACGACTGCAGATCCATTT 58.094 47.619 23.35 0.00 0.00 2.32
826 1152 2.604046 GGTACGACTGCAGATCCATT 57.396 50.000 23.35 0.00 0.00 3.16
841 1167 5.725110 TTCTACGACTTCAGATACGGTAC 57.275 43.478 0.00 0.00 0.00 3.34
842 1168 6.595326 TCTTTTCTACGACTTCAGATACGGTA 59.405 38.462 0.00 0.00 0.00 4.02
843 1169 5.413833 TCTTTTCTACGACTTCAGATACGGT 59.586 40.000 0.00 0.00 0.00 4.83
844 1170 5.877031 TCTTTTCTACGACTTCAGATACGG 58.123 41.667 0.00 0.00 0.00 4.02
845 1171 6.967767 ACATCTTTTCTACGACTTCAGATACG 59.032 38.462 0.00 0.00 0.00 3.06
846 1172 7.164498 CGACATCTTTTCTACGACTTCAGATAC 59.836 40.741 0.00 0.00 0.00 2.24
861 1187 3.270874 CGACTTACGCGACATCTTTTC 57.729 47.619 15.93 0.00 34.51 2.29
924 1260 1.215244 CAAGATCGAGCGATGCACAT 58.785 50.000 10.42 0.00 34.60 3.21
929 1265 0.848942 CGGAACAAGATCGAGCGATG 59.151 55.000 10.42 7.77 34.60 3.84
964 1301 3.195698 GGCCAAGATCGACACGCC 61.196 66.667 0.00 0.00 0.00 5.68
971 1308 2.609825 CCGATTCAGGCCAAGATCG 58.390 57.895 20.91 20.91 0.00 3.69
1041 1382 1.322442 TGATCGTCAGCAGATCGGAT 58.678 50.000 0.00 0.00 45.44 4.18
1050 1391 4.039601 CGCGCGATGATCGTCAGC 62.040 66.667 28.94 17.03 42.81 4.26
1234 1586 3.023949 GCGAGAGGTGGCATGAGGT 62.024 63.158 0.00 0.00 0.00 3.85
1239 1591 3.005539 AGGTGCGAGAGGTGGCAT 61.006 61.111 0.00 0.00 39.85 4.40
1528 1909 4.722700 CACCTTGGTCCAGGCCGG 62.723 72.222 0.00 0.00 37.47 6.13
1602 1983 1.213537 GTGCTGCATGCCGAACATT 59.786 52.632 16.68 0.00 42.00 2.71
1788 2172 1.046472 ACTTGACGGTGGTCCTGACA 61.046 55.000 0.00 0.00 42.73 3.58
2010 2406 1.191535 TGTTATCGTAGCAGCAGGGT 58.808 50.000 0.00 0.00 0.00 4.34
2011 2407 2.205074 CTTGTTATCGTAGCAGCAGGG 58.795 52.381 0.00 0.00 0.00 4.45
2090 2486 0.028242 CTCGACGCTGTAGCAGTAGG 59.972 60.000 4.59 0.47 42.21 3.18
2106 2502 2.350772 GCATTCCAACTTGTTGTCCTCG 60.351 50.000 11.82 0.00 0.00 4.63
2107 2503 2.350772 CGCATTCCAACTTGTTGTCCTC 60.351 50.000 11.82 0.00 0.00 3.71
2109 2505 1.336755 ACGCATTCCAACTTGTTGTCC 59.663 47.619 11.82 0.00 0.00 4.02
2201 2597 9.454859 AGATAAAATGAAACTAGCAGCTAACTT 57.545 29.630 3.09 0.00 0.00 2.66
2232 2628 9.877178 AACTAGCTAGCTATTCGCAATATAAAT 57.123 29.630 24.36 0.00 42.61 1.40
2233 2629 9.706691 AAACTAGCTAGCTATTCGCAATATAAA 57.293 29.630 24.36 0.00 42.61 1.40
2234 2630 9.355215 GAAACTAGCTAGCTATTCGCAATATAA 57.645 33.333 24.36 0.00 42.61 0.98
2235 2631 8.520351 TGAAACTAGCTAGCTATTCGCAATATA 58.480 33.333 24.36 6.46 42.61 0.86
2237 2633 6.745116 TGAAACTAGCTAGCTATTCGCAATA 58.255 36.000 24.36 7.72 42.61 1.90
2238 2634 5.601662 TGAAACTAGCTAGCTATTCGCAAT 58.398 37.500 24.36 7.36 42.61 3.56
2239 2635 5.006153 TGAAACTAGCTAGCTATTCGCAA 57.994 39.130 24.36 8.37 42.61 4.85
2240 2636 4.649088 TGAAACTAGCTAGCTATTCGCA 57.351 40.909 24.36 16.31 42.61 5.10
2241 2637 7.639162 TTAATGAAACTAGCTAGCTATTCGC 57.361 36.000 24.36 14.18 39.57 4.70
2242 2638 9.411801 TGATTAATGAAACTAGCTAGCTATTCG 57.588 33.333 24.36 15.36 0.00 3.34
2244 2640 9.197694 CGTGATTAATGAAACTAGCTAGCTATT 57.802 33.333 24.36 16.53 0.00 1.73
2245 2641 8.361139 ACGTGATTAATGAAACTAGCTAGCTAT 58.639 33.333 24.36 10.49 0.00 2.97
2246 2642 7.713750 ACGTGATTAATGAAACTAGCTAGCTA 58.286 34.615 22.85 22.85 0.00 3.32
2247 2643 6.574350 ACGTGATTAATGAAACTAGCTAGCT 58.426 36.000 23.12 23.12 0.00 3.32
2248 2644 6.830114 ACGTGATTAATGAAACTAGCTAGC 57.170 37.500 20.91 6.62 0.00 3.42
2249 2645 8.480853 GCTAACGTGATTAATGAAACTAGCTAG 58.519 37.037 19.44 19.44 0.00 3.42
2250 2646 7.977293 TGCTAACGTGATTAATGAAACTAGCTA 59.023 33.333 0.00 0.00 0.00 3.32
2251 2647 6.816640 TGCTAACGTGATTAATGAAACTAGCT 59.183 34.615 0.00 0.00 0.00 3.32
2252 2648 7.000575 TGCTAACGTGATTAATGAAACTAGC 57.999 36.000 0.00 1.06 0.00 3.42
2253 2649 8.186178 ACTGCTAACGTGATTAATGAAACTAG 57.814 34.615 0.00 0.00 0.00 2.57
2254 2650 8.542497 AACTGCTAACGTGATTAATGAAACTA 57.458 30.769 0.00 0.00 0.00 2.24
2258 2654 8.346300 TCAAAAACTGCTAACGTGATTAATGAA 58.654 29.630 0.00 0.00 0.00 2.57
2268 2664 5.554822 TTTGTCTCAAAAACTGCTAACGT 57.445 34.783 0.00 0.00 0.00 3.99
2294 2690 7.309560 CGGGTTCCACCAAATAGAAAAGTAATT 60.310 37.037 0.00 0.00 41.02 1.40
2298 2694 3.824443 CGGGTTCCACCAAATAGAAAAGT 59.176 43.478 0.00 0.00 41.02 2.66
2299 2695 3.824443 ACGGGTTCCACCAAATAGAAAAG 59.176 43.478 0.00 0.00 41.02 2.27
2304 2700 3.558418 CGATTACGGGTTCCACCAAATAG 59.442 47.826 0.00 0.00 41.02 1.73
2312 2708 1.196911 ATGGACGATTACGGGTTCCA 58.803 50.000 0.00 0.00 42.96 3.53
2317 2713 2.100916 AGACAGAATGGACGATTACGGG 59.899 50.000 0.00 0.00 43.62 5.28
2319 2715 5.779806 AAAAGACAGAATGGACGATTACG 57.220 39.130 0.00 0.00 43.62 3.18
2365 2761 9.533253 CAAGATCCAACTAAAAACATTTTGAGT 57.467 29.630 1.77 1.77 42.34 3.41
2366 2762 8.981647 CCAAGATCCAACTAAAAACATTTTGAG 58.018 33.333 0.57 0.57 35.22 3.02
2367 2763 8.700051 TCCAAGATCCAACTAAAAACATTTTGA 58.300 29.630 0.00 0.00 0.00 2.69
2368 2764 8.885494 TCCAAGATCCAACTAAAAACATTTTG 57.115 30.769 0.00 0.00 0.00 2.44
2369 2765 9.710900 GATCCAAGATCCAACTAAAAACATTTT 57.289 29.630 0.00 0.00 0.00 1.82
2370 2766 9.093458 AGATCCAAGATCCAACTAAAAACATTT 57.907 29.630 0.99 0.00 0.00 2.32
2371 2767 8.655935 AGATCCAAGATCCAACTAAAAACATT 57.344 30.769 0.99 0.00 0.00 2.71
2372 2768 8.526147 CAAGATCCAAGATCCAACTAAAAACAT 58.474 33.333 0.99 0.00 0.00 2.71
2373 2769 7.039784 CCAAGATCCAAGATCCAACTAAAAACA 60.040 37.037 0.99 0.00 0.00 2.83
2374 2770 7.176690 TCCAAGATCCAAGATCCAACTAAAAAC 59.823 37.037 0.99 0.00 0.00 2.43
2375 2771 7.237982 TCCAAGATCCAAGATCCAACTAAAAA 58.762 34.615 0.99 0.00 0.00 1.94
2376 2772 6.789268 TCCAAGATCCAAGATCCAACTAAAA 58.211 36.000 0.99 0.00 0.00 1.52
2377 2773 6.387192 TCCAAGATCCAAGATCCAACTAAA 57.613 37.500 0.99 0.00 0.00 1.85
2378 2774 6.069440 ACATCCAAGATCCAAGATCCAACTAA 60.069 38.462 0.99 0.00 0.00 2.24
2379 2775 5.429762 ACATCCAAGATCCAAGATCCAACTA 59.570 40.000 0.99 0.00 0.00 2.24
2380 2776 4.229123 ACATCCAAGATCCAAGATCCAACT 59.771 41.667 0.99 0.00 0.00 3.16
2381 2777 4.530875 ACATCCAAGATCCAAGATCCAAC 58.469 43.478 0.99 0.00 0.00 3.77
2382 2778 4.385643 GGACATCCAAGATCCAAGATCCAA 60.386 45.833 0.99 0.00 35.64 3.53
2383 2779 3.137176 GGACATCCAAGATCCAAGATCCA 59.863 47.826 0.99 0.00 35.64 3.41
2384 2780 3.393941 AGGACATCCAAGATCCAAGATCC 59.606 47.826 0.00 0.00 38.89 3.36
2385 2781 4.640364 GAGGACATCCAAGATCCAAGATC 58.360 47.826 0.00 0.00 38.89 2.75
2386 2782 3.070734 CGAGGACATCCAAGATCCAAGAT 59.929 47.826 0.00 0.00 38.89 2.40
2387 2783 2.432146 CGAGGACATCCAAGATCCAAGA 59.568 50.000 0.00 0.00 38.89 3.02
2388 2784 2.831333 CGAGGACATCCAAGATCCAAG 58.169 52.381 0.00 0.00 38.89 3.61
2389 2785 1.134401 GCGAGGACATCCAAGATCCAA 60.134 52.381 0.00 0.00 38.89 3.53
2390 2786 0.465705 GCGAGGACATCCAAGATCCA 59.534 55.000 0.00 0.00 38.89 3.41
2391 2787 0.755686 AGCGAGGACATCCAAGATCC 59.244 55.000 0.00 0.00 38.89 3.36
2392 2788 1.601663 CGAGCGAGGACATCCAAGATC 60.602 57.143 0.00 1.14 38.89 2.75
2393 2789 0.387202 CGAGCGAGGACATCCAAGAT 59.613 55.000 0.00 0.00 38.89 2.40
2394 2790 1.809869 CGAGCGAGGACATCCAAGA 59.190 57.895 0.00 0.00 38.89 3.02
2395 2791 1.880340 GCGAGCGAGGACATCCAAG 60.880 63.158 0.00 0.00 38.89 3.61
2396 2792 2.184322 GCGAGCGAGGACATCCAA 59.816 61.111 0.00 0.00 38.89 3.53
2397 2793 2.755876 AGCGAGCGAGGACATCCA 60.756 61.111 0.00 0.00 38.89 3.41
2398 2794 2.026879 GAGCGAGCGAGGACATCC 59.973 66.667 0.00 0.00 0.00 3.51
2399 2795 2.026879 GGAGCGAGCGAGGACATC 59.973 66.667 0.00 0.00 0.00 3.06
2400 2796 3.893763 CGGAGCGAGCGAGGACAT 61.894 66.667 0.00 0.00 0.00 3.06
2541 2948 2.659016 CTGGAGTCAAGCCAGCGA 59.341 61.111 0.00 0.00 45.66 4.93
2584 2991 2.044946 GAATTGGCTGGGGCGTCT 60.045 61.111 0.00 0.00 39.81 4.18
2593 3000 0.179000 CGGTAGGAGCTGAATTGGCT 59.821 55.000 0.00 2.60 43.26 4.75
2598 3005 2.107141 GCGCGGTAGGAGCTGAAT 59.893 61.111 8.83 0.00 38.55 2.57
2788 3195 4.382320 GGGGTTCACGCTACGGCA 62.382 66.667 0.00 0.00 38.60 5.69
2794 3201 2.120718 AGAGGAGGGGTTCACGCT 59.879 61.111 0.00 0.00 46.25 5.07
3046 3455 4.129737 GCCGGCTACACTCGAGCA 62.130 66.667 22.15 0.00 41.98 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.