Multiple sequence alignment - TraesCS6A01G059200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G059200 chr6A 100.000 6176 0 0 1 6176 31360519 31354344 0.000000e+00 11406.0
1 TraesCS6A01G059200 chr6A 97.778 90 2 0 3374 3463 31357057 31357146 8.290000e-34 156.0
2 TraesCS6A01G059200 chr6A 100.000 50 0 0 3416 3465 21048329 21048280 6.590000e-15 93.5
3 TraesCS6A01G059200 chrUn 95.640 2500 67 14 3693 6176 103786481 103784008 0.000000e+00 3975.0
4 TraesCS6A01G059200 chrUn 89.551 2871 145 67 606 3375 103789617 103786801 0.000000e+00 3496.0
5 TraesCS6A01G059200 chrUn 95.814 430 16 2 1 428 81992244 81991815 0.000000e+00 693.0
6 TraesCS6A01G059200 chrUn 94.260 453 21 5 1 450 309082976 309082526 0.000000e+00 688.0
7 TraesCS6A01G059200 chrUn 94.915 236 7 2 3464 3695 103786797 103786563 1.270000e-96 364.0
8 TraesCS6A01G059200 chr6B 92.620 2737 130 29 3466 6174 55999191 55996499 0.000000e+00 3869.0
9 TraesCS6A01G059200 chr6B 84.345 1252 127 35 1589 2814 56001058 55999850 0.000000e+00 1162.0
10 TraesCS6A01G059200 chr6B 85.714 581 60 12 2811 3375 55999770 55999197 5.330000e-165 592.0
11 TraesCS6A01G059200 chr6B 83.459 532 37 18 718 1222 56002007 56001500 1.220000e-121 448.0
12 TraesCS6A01G059200 chr6B 79.181 293 40 16 1270 1552 56001487 56001206 3.800000e-42 183.0
13 TraesCS6A01G059200 chr4A 96.047 430 15 2 1 428 503605617 503605188 0.000000e+00 699.0
14 TraesCS6A01G059200 chr4A 86.022 93 8 3 3374 3466 3191423 3191510 1.830000e-15 95.3
15 TraesCS6A01G059200 chr2A 95.804 429 17 1 1 428 174870193 174870621 0.000000e+00 691.0
16 TraesCS6A01G059200 chr2A 95.392 434 18 2 1 433 638787305 638786873 0.000000e+00 689.0
17 TraesCS6A01G059200 chr2A 80.916 131 8 6 3335 3463 125206058 125206173 3.070000e-13 87.9
18 TraesCS6A01G059200 chr2A 97.959 49 1 0 3373 3421 523072536 523072584 1.100000e-12 86.1
19 TraesCS6A01G059200 chr7A 94.260 453 21 5 1 450 171543913 171543463 0.000000e+00 688.0
20 TraesCS6A01G059200 chr5B 95.581 430 17 2 1 428 145843821 145843392 0.000000e+00 688.0
21 TraesCS6A01G059200 chr3A 95.581 430 17 2 1 428 659520934 659521363 0.000000e+00 688.0
22 TraesCS6A01G059200 chr3A 84.016 244 24 8 921 1160 42410797 42410565 2.900000e-53 220.0
23 TraesCS6A01G059200 chr3A 98.214 56 1 0 3416 3471 402126348 402126403 1.420000e-16 99.0
24 TraesCS6A01G059200 chr3A 97.959 49 1 0 3373 3421 402126396 402126348 1.100000e-12 86.1
25 TraesCS6A01G059200 chr1B 95.785 427 16 2 4 428 138026714 138026288 0.000000e+00 688.0
26 TraesCS6A01G059200 chr3B 82.716 243 22 14 921 1152 761771258 761771025 1.360000e-46 198.0
27 TraesCS6A01G059200 chr3B 93.333 60 1 3 3365 3421 558103231 558103290 1.100000e-12 86.1
28 TraesCS6A01G059200 chr1A 92.632 95 1 2 3381 3470 419028883 419028790 1.400000e-26 132.0
29 TraesCS6A01G059200 chr1A 93.258 89 1 1 3374 3457 419028796 419028884 6.500000e-25 126.0
30 TraesCS6A01G059200 chr2D 91.566 83 5 2 3381 3463 585859818 585859898 5.060000e-21 113.0
31 TraesCS6A01G059200 chr7B 86.869 99 9 4 3373 3467 48468548 48468450 2.350000e-19 108.0
32 TraesCS6A01G059200 chr7B 87.234 94 8 4 3374 3463 48468454 48468547 3.050000e-18 104.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G059200 chr6A 31354344 31360519 6175 True 11406.000000 11406 100.000000 1 6176 1 chr6A.!!$R2 6175
1 TraesCS6A01G059200 chrUn 103784008 103789617 5609 True 2611.666667 3975 93.368667 606 6176 3 chrUn.!!$R3 5570
2 TraesCS6A01G059200 chr6B 55996499 56002007 5508 True 1250.800000 3869 85.063800 718 6174 5 chr6B.!!$R1 5456

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
673 690 0.033366 GCATCAAACCCAACCCACAC 59.967 55.0 0.00 0.00 0.00 3.82 F
1681 1873 0.178990 GGGGGTGTTCTGTTCTGCTT 60.179 55.0 0.00 0.00 0.00 3.91 F
2099 2305 0.036388 TAAGCTTCGTTCTGCCCCAG 60.036 55.0 0.00 0.00 0.00 4.45 F
2201 2424 0.323629 GTGTAGTGGGCAGTGGCTTA 59.676 55.0 17.16 3.32 40.87 3.09 F
3385 3739 0.892755 TGCATCTTACTCCGTCCGTT 59.107 50.0 0.00 0.00 0.00 4.44 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1711 1915 0.030101 TAAGCGTGGCAAAAGCACAC 59.970 50.000 12.28 0.00 35.46 3.82 R
3445 3799 0.038744 ACTACTCCCTCCGTTCGGAA 59.961 55.000 14.79 0.04 33.41 4.30 R
3914 4372 0.547471 TGATCTGGGCCTCAGGTTCA 60.547 55.000 17.89 17.03 43.53 3.18 R
3962 4420 2.300433 TGCACATTCACCCAGATATGC 58.700 47.619 0.00 0.00 32.38 3.14 R
5219 5679 1.532604 TTGTCATCTCCTGTCGCCGT 61.533 55.000 0.00 0.00 0.00 5.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.544038 TTACTATCATCATGCATGGAAACG 57.456 37.500 25.97 12.75 32.64 3.60
24 25 4.707105 ACTATCATCATGCATGGAAACGA 58.293 39.130 25.97 15.01 32.64 3.85
25 26 5.125356 ACTATCATCATGCATGGAAACGAA 58.875 37.500 25.97 5.63 32.64 3.85
26 27 5.766670 ACTATCATCATGCATGGAAACGAAT 59.233 36.000 25.97 7.86 32.64 3.34
27 28 4.556942 TCATCATGCATGGAAACGAATC 57.443 40.909 25.97 0.00 32.64 2.52
28 29 3.946558 TCATCATGCATGGAAACGAATCA 59.053 39.130 25.97 3.31 32.64 2.57
29 30 4.581409 TCATCATGCATGGAAACGAATCAT 59.419 37.500 25.97 5.65 32.64 2.45
30 31 5.764192 TCATCATGCATGGAAACGAATCATA 59.236 36.000 25.97 2.55 32.64 2.15
31 32 6.262720 TCATCATGCATGGAAACGAATCATAA 59.737 34.615 25.97 2.09 32.64 1.90
32 33 6.448207 TCATGCATGGAAACGAATCATAAA 57.552 33.333 25.97 0.00 0.00 1.40
33 34 6.497437 TCATGCATGGAAACGAATCATAAAG 58.503 36.000 25.97 0.00 0.00 1.85
34 35 6.318396 TCATGCATGGAAACGAATCATAAAGA 59.682 34.615 25.97 0.00 0.00 2.52
35 36 6.507958 TGCATGGAAACGAATCATAAAGAA 57.492 33.333 0.00 0.00 0.00 2.52
36 37 6.918626 TGCATGGAAACGAATCATAAAGAAA 58.081 32.000 0.00 0.00 0.00 2.52
37 38 7.374272 TGCATGGAAACGAATCATAAAGAAAA 58.626 30.769 0.00 0.00 0.00 2.29
38 39 7.869937 TGCATGGAAACGAATCATAAAGAAAAA 59.130 29.630 0.00 0.00 0.00 1.94
39 40 8.375465 GCATGGAAACGAATCATAAAGAAAAAG 58.625 33.333 0.00 0.00 0.00 2.27
40 41 9.624697 CATGGAAACGAATCATAAAGAAAAAGA 57.375 29.630 0.00 0.00 0.00 2.52
78 79 8.950208 ACTACACTTATAGAAAGCTTCCAATC 57.050 34.615 0.00 0.00 0.00 2.67
79 80 8.763601 ACTACACTTATAGAAAGCTTCCAATCT 58.236 33.333 0.00 0.92 0.00 2.40
80 81 9.255304 CTACACTTATAGAAAGCTTCCAATCTC 57.745 37.037 0.00 0.00 0.00 2.75
81 82 7.856415 ACACTTATAGAAAGCTTCCAATCTCT 58.144 34.615 0.00 0.00 0.00 3.10
82 83 7.768120 ACACTTATAGAAAGCTTCCAATCTCTG 59.232 37.037 0.00 0.00 0.00 3.35
83 84 6.765512 ACTTATAGAAAGCTTCCAATCTCTGC 59.234 38.462 0.00 0.00 0.00 4.26
84 85 3.717452 AGAAAGCTTCCAATCTCTGCT 57.283 42.857 0.00 0.00 35.30 4.24
85 86 4.833478 AGAAAGCTTCCAATCTCTGCTA 57.167 40.909 0.00 0.00 33.28 3.49
86 87 5.370875 AGAAAGCTTCCAATCTCTGCTAT 57.629 39.130 0.00 0.00 33.28 2.97
87 88 5.367302 AGAAAGCTTCCAATCTCTGCTATC 58.633 41.667 0.00 0.00 33.28 2.08
88 89 4.767578 AAGCTTCCAATCTCTGCTATCA 57.232 40.909 0.00 0.00 33.28 2.15
89 90 4.767578 AGCTTCCAATCTCTGCTATCAA 57.232 40.909 0.00 0.00 31.71 2.57
90 91 5.108187 AGCTTCCAATCTCTGCTATCAAA 57.892 39.130 0.00 0.00 31.71 2.69
91 92 4.880696 AGCTTCCAATCTCTGCTATCAAAC 59.119 41.667 0.00 0.00 31.71 2.93
92 93 4.637534 GCTTCCAATCTCTGCTATCAAACA 59.362 41.667 0.00 0.00 0.00 2.83
93 94 5.220815 GCTTCCAATCTCTGCTATCAAACAG 60.221 44.000 0.00 0.00 35.15 3.16
94 95 5.426689 TCCAATCTCTGCTATCAAACAGT 57.573 39.130 0.00 0.00 35.37 3.55
95 96 5.809001 TCCAATCTCTGCTATCAAACAGTT 58.191 37.500 0.00 0.00 35.37 3.16
96 97 6.240894 TCCAATCTCTGCTATCAAACAGTTT 58.759 36.000 0.00 0.00 35.37 2.66
97 98 6.372659 TCCAATCTCTGCTATCAAACAGTTTC 59.627 38.462 0.00 0.00 35.37 2.78
98 99 6.373774 CCAATCTCTGCTATCAAACAGTTTCT 59.626 38.462 0.00 0.00 35.37 2.52
99 100 6.981762 ATCTCTGCTATCAAACAGTTTCTG 57.018 37.500 0.00 0.00 37.52 3.02
100 101 4.692625 TCTCTGCTATCAAACAGTTTCTGC 59.307 41.667 0.00 0.00 34.37 4.26
101 102 3.753272 TCTGCTATCAAACAGTTTCTGCC 59.247 43.478 0.00 0.00 34.37 4.85
102 103 2.819608 TGCTATCAAACAGTTTCTGCCC 59.180 45.455 0.00 0.00 34.37 5.36
103 104 2.819608 GCTATCAAACAGTTTCTGCCCA 59.180 45.455 0.00 0.00 34.37 5.36
104 105 3.255642 GCTATCAAACAGTTTCTGCCCAA 59.744 43.478 0.00 0.00 34.37 4.12
105 106 4.261994 GCTATCAAACAGTTTCTGCCCAAA 60.262 41.667 0.00 0.00 34.37 3.28
106 107 3.518634 TCAAACAGTTTCTGCCCAAAC 57.481 42.857 0.00 0.34 36.64 2.93
107 108 2.828520 TCAAACAGTTTCTGCCCAAACA 59.171 40.909 9.57 0.00 38.53 2.83
108 109 3.259374 TCAAACAGTTTCTGCCCAAACAA 59.741 39.130 9.57 0.00 38.53 2.83
109 110 3.525268 AACAGTTTCTGCCCAAACAAG 57.475 42.857 9.57 5.04 38.53 3.16
110 111 1.756538 ACAGTTTCTGCCCAAACAAGG 59.243 47.619 9.57 2.83 38.53 3.61
111 112 2.031120 CAGTTTCTGCCCAAACAAGGA 58.969 47.619 9.57 0.00 38.53 3.36
112 113 2.430332 CAGTTTCTGCCCAAACAAGGAA 59.570 45.455 9.57 0.00 38.53 3.36
113 114 2.695147 AGTTTCTGCCCAAACAAGGAAG 59.305 45.455 9.57 0.00 38.53 3.46
114 115 1.703411 TTCTGCCCAAACAAGGAAGG 58.297 50.000 0.00 0.00 0.00 3.46
115 116 0.850100 TCTGCCCAAACAAGGAAGGA 59.150 50.000 0.00 0.00 0.00 3.36
116 117 1.216678 TCTGCCCAAACAAGGAAGGAA 59.783 47.619 0.00 0.00 0.00 3.36
117 118 2.038659 CTGCCCAAACAAGGAAGGAAA 58.961 47.619 0.00 0.00 0.00 3.13
118 119 2.036346 CTGCCCAAACAAGGAAGGAAAG 59.964 50.000 0.00 0.00 0.00 2.62
119 120 2.039418 GCCCAAACAAGGAAGGAAAGT 58.961 47.619 0.00 0.00 0.00 2.66
120 121 2.434336 GCCCAAACAAGGAAGGAAAGTT 59.566 45.455 0.00 0.00 0.00 2.66
121 122 3.639561 GCCCAAACAAGGAAGGAAAGTTA 59.360 43.478 0.00 0.00 0.00 2.24
122 123 4.283467 GCCCAAACAAGGAAGGAAAGTTAT 59.717 41.667 0.00 0.00 0.00 1.89
123 124 5.783111 CCCAAACAAGGAAGGAAAGTTATG 58.217 41.667 0.00 0.00 0.00 1.90
124 125 5.279456 CCCAAACAAGGAAGGAAAGTTATGG 60.279 44.000 0.00 0.00 0.00 2.74
125 126 5.538433 CCAAACAAGGAAGGAAAGTTATGGA 59.462 40.000 0.00 0.00 0.00 3.41
126 127 6.447162 CAAACAAGGAAGGAAAGTTATGGAC 58.553 40.000 0.00 0.00 0.00 4.02
127 128 4.324267 ACAAGGAAGGAAAGTTATGGACG 58.676 43.478 0.00 0.00 0.00 4.79
128 129 4.202430 ACAAGGAAGGAAAGTTATGGACGT 60.202 41.667 0.00 0.00 0.00 4.34
129 130 3.939066 AGGAAGGAAAGTTATGGACGTG 58.061 45.455 0.00 0.00 0.00 4.49
130 131 3.581332 AGGAAGGAAAGTTATGGACGTGA 59.419 43.478 0.00 0.00 0.00 4.35
131 132 4.225267 AGGAAGGAAAGTTATGGACGTGAT 59.775 41.667 0.00 0.00 0.00 3.06
132 133 4.941873 GGAAGGAAAGTTATGGACGTGATT 59.058 41.667 0.00 0.00 0.00 2.57
133 134 5.064834 GGAAGGAAAGTTATGGACGTGATTC 59.935 44.000 0.00 0.00 0.00 2.52
134 135 4.181578 AGGAAAGTTATGGACGTGATTCG 58.818 43.478 0.00 0.00 46.00 3.34
135 136 3.308866 GGAAAGTTATGGACGTGATTCGG 59.691 47.826 0.00 0.00 44.69 4.30
136 137 3.880047 AAGTTATGGACGTGATTCGGA 57.120 42.857 0.00 0.00 44.69 4.55
137 138 3.880047 AGTTATGGACGTGATTCGGAA 57.120 42.857 0.00 0.00 44.69 4.30
138 139 3.782046 AGTTATGGACGTGATTCGGAAG 58.218 45.455 0.00 0.00 44.69 3.46
139 140 2.864343 GTTATGGACGTGATTCGGAAGG 59.136 50.000 0.00 0.00 44.69 3.46
140 141 1.191535 ATGGACGTGATTCGGAAGGA 58.808 50.000 0.00 0.00 44.69 3.36
141 142 0.970640 TGGACGTGATTCGGAAGGAA 59.029 50.000 0.00 0.00 44.69 3.36
142 143 1.345089 TGGACGTGATTCGGAAGGAAA 59.655 47.619 0.00 0.00 44.69 3.13
143 144 1.730612 GGACGTGATTCGGAAGGAAAC 59.269 52.381 0.00 0.00 44.69 2.78
144 145 2.409975 GACGTGATTCGGAAGGAAACA 58.590 47.619 0.00 0.00 44.69 2.83
145 146 2.803956 GACGTGATTCGGAAGGAAACAA 59.196 45.455 0.00 0.00 38.88 2.83
146 147 3.207778 ACGTGATTCGGAAGGAAACAAA 58.792 40.909 0.00 0.00 38.88 2.83
147 148 3.002965 ACGTGATTCGGAAGGAAACAAAC 59.997 43.478 0.00 0.00 38.88 2.93
148 149 3.608474 CGTGATTCGGAAGGAAACAAACC 60.608 47.826 0.00 0.00 38.88 3.27
149 150 3.568430 GTGATTCGGAAGGAAACAAACCT 59.432 43.478 0.00 0.00 38.88 3.50
151 152 5.239963 GTGATTCGGAAGGAAACAAACCTTA 59.760 40.000 0.00 0.00 46.14 2.69
152 153 6.007703 TGATTCGGAAGGAAACAAACCTTAT 58.992 36.000 0.00 0.00 46.14 1.73
153 154 5.699097 TTCGGAAGGAAACAAACCTTATG 57.301 39.130 0.00 0.00 46.14 1.90
154 155 4.975631 TCGGAAGGAAACAAACCTTATGA 58.024 39.130 0.00 0.00 46.14 2.15
155 156 5.378332 TCGGAAGGAAACAAACCTTATGAA 58.622 37.500 0.00 0.00 46.14 2.57
156 157 5.472137 TCGGAAGGAAACAAACCTTATGAAG 59.528 40.000 0.00 0.00 46.14 3.02
157 158 5.472137 CGGAAGGAAACAAACCTTATGAAGA 59.528 40.000 0.00 0.00 46.14 2.87
158 159 6.151144 CGGAAGGAAACAAACCTTATGAAGAT 59.849 38.462 0.00 0.00 46.14 2.40
159 160 7.309194 CGGAAGGAAACAAACCTTATGAAGATT 60.309 37.037 0.00 0.00 46.14 2.40
160 161 9.020731 GGAAGGAAACAAACCTTATGAAGATTA 57.979 33.333 0.00 0.00 46.14 1.75
200 201 9.895138 TGATCTTTAGAGATTGATTGTGATTGA 57.105 29.630 0.00 0.00 42.66 2.57
239 240 9.988350 AAGACATTACTAAATAATTTGCGTCAG 57.012 29.630 0.00 0.00 30.54 3.51
240 241 9.162764 AGACATTACTAAATAATTTGCGTCAGT 57.837 29.630 0.00 0.00 30.54 3.41
245 246 9.602568 TTACTAAATAATTTGCGTCAGTATGGA 57.397 29.630 0.00 0.00 36.16 3.41
246 247 8.500753 ACTAAATAATTTGCGTCAGTATGGAA 57.499 30.769 0.00 0.00 36.16 3.53
247 248 8.952278 ACTAAATAATTTGCGTCAGTATGGAAA 58.048 29.630 0.00 0.00 36.52 3.13
248 249 9.438291 CTAAATAATTTGCGTCAGTATGGAAAG 57.562 33.333 0.00 0.00 35.69 2.62
249 250 7.391148 AATAATTTGCGTCAGTATGGAAAGT 57.609 32.000 0.00 0.00 35.69 2.66
250 251 5.705609 AATTTGCGTCAGTATGGAAAGTT 57.294 34.783 0.00 0.00 35.69 2.66
251 252 4.742438 TTTGCGTCAGTATGGAAAGTTC 57.258 40.909 0.00 0.00 36.16 3.01
252 253 3.678056 TGCGTCAGTATGGAAAGTTCT 57.322 42.857 0.00 0.00 36.16 3.01
253 254 3.325870 TGCGTCAGTATGGAAAGTTCTG 58.674 45.455 0.00 0.00 36.16 3.02
254 255 3.006430 TGCGTCAGTATGGAAAGTTCTGA 59.994 43.478 0.00 0.00 36.16 3.27
255 256 4.184629 GCGTCAGTATGGAAAGTTCTGAT 58.815 43.478 0.00 0.00 37.46 2.90
256 257 4.268884 GCGTCAGTATGGAAAGTTCTGATC 59.731 45.833 0.00 0.00 37.46 2.92
257 258 4.806247 CGTCAGTATGGAAAGTTCTGATCC 59.194 45.833 0.00 0.00 37.46 3.36
258 259 4.806247 GTCAGTATGGAAAGTTCTGATCCG 59.194 45.833 0.00 0.00 37.46 4.18
259 260 4.466370 TCAGTATGGAAAGTTCTGATCCGT 59.534 41.667 0.00 0.00 35.96 4.69
260 261 5.046591 TCAGTATGGAAAGTTCTGATCCGTT 60.047 40.000 0.00 0.00 35.96 4.44
261 262 5.643777 CAGTATGGAAAGTTCTGATCCGTTT 59.356 40.000 0.00 0.00 35.96 3.60
262 263 6.816640 CAGTATGGAAAGTTCTGATCCGTTTA 59.183 38.462 0.00 0.00 35.96 2.01
263 264 7.010552 CAGTATGGAAAGTTCTGATCCGTTTAG 59.989 40.741 0.00 0.00 35.96 1.85
264 265 5.223449 TGGAAAGTTCTGATCCGTTTAGT 57.777 39.130 0.00 0.00 35.96 2.24
265 266 5.617252 TGGAAAGTTCTGATCCGTTTAGTT 58.383 37.500 0.00 0.00 35.96 2.24
266 267 6.059484 TGGAAAGTTCTGATCCGTTTAGTTT 58.941 36.000 0.00 0.00 35.96 2.66
267 268 6.544564 TGGAAAGTTCTGATCCGTTTAGTTTT 59.455 34.615 0.00 0.00 35.96 2.43
268 269 7.067737 TGGAAAGTTCTGATCCGTTTAGTTTTT 59.932 33.333 0.00 0.00 35.96 1.94
288 289 4.610605 TTTTCGTTGTATGAGAGGGTGA 57.389 40.909 0.00 0.00 0.00 4.02
289 290 4.610605 TTTCGTTGTATGAGAGGGTGAA 57.389 40.909 0.00 0.00 0.00 3.18
290 291 3.868757 TCGTTGTATGAGAGGGTGAAG 57.131 47.619 0.00 0.00 0.00 3.02
291 292 3.162666 TCGTTGTATGAGAGGGTGAAGT 58.837 45.455 0.00 0.00 0.00 3.01
292 293 3.056821 TCGTTGTATGAGAGGGTGAAGTG 60.057 47.826 0.00 0.00 0.00 3.16
293 294 3.056821 CGTTGTATGAGAGGGTGAAGTGA 60.057 47.826 0.00 0.00 0.00 3.41
294 295 4.560716 CGTTGTATGAGAGGGTGAAGTGAA 60.561 45.833 0.00 0.00 0.00 3.18
295 296 5.305585 GTTGTATGAGAGGGTGAAGTGAAA 58.694 41.667 0.00 0.00 0.00 2.69
296 297 5.560722 TGTATGAGAGGGTGAAGTGAAAA 57.439 39.130 0.00 0.00 0.00 2.29
297 298 6.126863 TGTATGAGAGGGTGAAGTGAAAAT 57.873 37.500 0.00 0.00 0.00 1.82
298 299 7.252612 TGTATGAGAGGGTGAAGTGAAAATA 57.747 36.000 0.00 0.00 0.00 1.40
299 300 7.685481 TGTATGAGAGGGTGAAGTGAAAATAA 58.315 34.615 0.00 0.00 0.00 1.40
300 301 8.160765 TGTATGAGAGGGTGAAGTGAAAATAAA 58.839 33.333 0.00 0.00 0.00 1.40
301 302 6.877611 TGAGAGGGTGAAGTGAAAATAAAC 57.122 37.500 0.00 0.00 0.00 2.01
302 303 5.768164 TGAGAGGGTGAAGTGAAAATAAACC 59.232 40.000 0.00 0.00 0.00 3.27
303 304 4.760204 AGAGGGTGAAGTGAAAATAAACCG 59.240 41.667 0.00 0.00 0.00 4.44
304 305 4.721132 AGGGTGAAGTGAAAATAAACCGA 58.279 39.130 0.00 0.00 0.00 4.69
305 306 5.321927 AGGGTGAAGTGAAAATAAACCGAT 58.678 37.500 0.00 0.00 0.00 4.18
306 307 6.478129 AGGGTGAAGTGAAAATAAACCGATA 58.522 36.000 0.00 0.00 0.00 2.92
307 308 6.943718 AGGGTGAAGTGAAAATAAACCGATAA 59.056 34.615 0.00 0.00 0.00 1.75
308 309 7.449086 AGGGTGAAGTGAAAATAAACCGATAAA 59.551 33.333 0.00 0.00 0.00 1.40
309 310 7.753580 GGGTGAAGTGAAAATAAACCGATAAAG 59.246 37.037 0.00 0.00 0.00 1.85
310 311 8.294577 GGTGAAGTGAAAATAAACCGATAAAGT 58.705 33.333 0.00 0.00 0.00 2.66
311 312 9.113876 GTGAAGTGAAAATAAACCGATAAAGTG 57.886 33.333 0.00 0.00 0.00 3.16
312 313 8.293867 TGAAGTGAAAATAAACCGATAAAGTGG 58.706 33.333 0.00 0.00 0.00 4.00
313 314 7.153217 AGTGAAAATAAACCGATAAAGTGGG 57.847 36.000 0.00 0.00 0.00 4.61
314 315 6.943718 AGTGAAAATAAACCGATAAAGTGGGA 59.056 34.615 0.00 0.00 0.00 4.37
315 316 7.120726 AGTGAAAATAAACCGATAAAGTGGGAG 59.879 37.037 0.00 0.00 0.00 4.30
316 317 7.120138 GTGAAAATAAACCGATAAAGTGGGAGA 59.880 37.037 0.00 0.00 0.00 3.71
317 318 7.335924 TGAAAATAAACCGATAAAGTGGGAGAG 59.664 37.037 0.00 0.00 0.00 3.20
318 319 3.629142 AAACCGATAAAGTGGGAGAGG 57.371 47.619 0.00 0.00 0.00 3.69
319 320 0.831307 ACCGATAAAGTGGGAGAGGC 59.169 55.000 0.00 0.00 0.00 4.70
320 321 0.249489 CCGATAAAGTGGGAGAGGCG 60.249 60.000 0.00 0.00 0.00 5.52
321 322 0.744874 CGATAAAGTGGGAGAGGCGA 59.255 55.000 0.00 0.00 0.00 5.54
322 323 1.536284 CGATAAAGTGGGAGAGGCGAC 60.536 57.143 0.00 0.00 0.00 5.19
323 324 0.460311 ATAAAGTGGGAGAGGCGACG 59.540 55.000 0.00 0.00 0.00 5.12
324 325 0.609957 TAAAGTGGGAGAGGCGACGA 60.610 55.000 0.00 0.00 0.00 4.20
325 326 1.469335 AAAGTGGGAGAGGCGACGAA 61.469 55.000 0.00 0.00 0.00 3.85
326 327 1.469335 AAGTGGGAGAGGCGACGAAA 61.469 55.000 0.00 0.00 0.00 3.46
327 328 1.005394 GTGGGAGAGGCGACGAAAA 60.005 57.895 0.00 0.00 0.00 2.29
328 329 0.601841 GTGGGAGAGGCGACGAAAAA 60.602 55.000 0.00 0.00 0.00 1.94
350 351 6.710692 AAAATCTACAACGGTTAACCTACG 57.289 37.500 22.12 11.65 0.00 3.51
351 352 5.643379 AATCTACAACGGTTAACCTACGA 57.357 39.130 22.12 9.99 0.00 3.43
352 353 5.643379 ATCTACAACGGTTAACCTACGAA 57.357 39.130 22.12 4.61 0.00 3.85
353 354 5.446143 TCTACAACGGTTAACCTACGAAA 57.554 39.130 22.12 3.10 0.00 3.46
354 355 5.837437 TCTACAACGGTTAACCTACGAAAA 58.163 37.500 22.12 0.91 0.00 2.29
355 356 6.276847 TCTACAACGGTTAACCTACGAAAAA 58.723 36.000 22.12 0.00 0.00 1.94
379 380 3.541072 ACGAAAGTGGTGGGACGA 58.459 55.556 0.00 0.00 46.97 4.20
380 381 1.824658 ACGAAAGTGGTGGGACGAA 59.175 52.632 0.00 0.00 46.97 3.85
381 382 0.178533 ACGAAAGTGGTGGGACGAAA 59.821 50.000 0.00 0.00 46.97 3.46
382 383 1.301423 CGAAAGTGGTGGGACGAAAA 58.699 50.000 0.00 0.00 0.00 2.29
383 384 1.671845 CGAAAGTGGTGGGACGAAAAA 59.328 47.619 0.00 0.00 0.00 1.94
401 402 2.640316 AAAAACCTGGAAGCGAGACT 57.360 45.000 0.00 0.00 0.00 3.24
402 403 3.764237 AAAAACCTGGAAGCGAGACTA 57.236 42.857 0.00 0.00 0.00 2.59
403 404 2.745515 AAACCTGGAAGCGAGACTAC 57.254 50.000 0.00 0.00 0.00 2.73
404 405 0.896226 AACCTGGAAGCGAGACTACC 59.104 55.000 0.00 0.00 0.00 3.18
405 406 0.251653 ACCTGGAAGCGAGACTACCA 60.252 55.000 0.00 0.00 0.00 3.25
406 407 0.895530 CCTGGAAGCGAGACTACCAA 59.104 55.000 0.00 0.00 0.00 3.67
407 408 1.404315 CCTGGAAGCGAGACTACCAAC 60.404 57.143 0.00 0.00 0.00 3.77
408 409 1.546476 CTGGAAGCGAGACTACCAACT 59.454 52.381 0.00 0.00 0.00 3.16
409 410 1.272490 TGGAAGCGAGACTACCAACTG 59.728 52.381 0.00 0.00 0.00 3.16
410 411 1.272769 GGAAGCGAGACTACCAACTGT 59.727 52.381 0.00 0.00 0.00 3.55
411 412 2.288886 GGAAGCGAGACTACCAACTGTT 60.289 50.000 0.00 0.00 0.00 3.16
412 413 2.726832 AGCGAGACTACCAACTGTTC 57.273 50.000 0.00 0.00 0.00 3.18
413 414 1.272769 AGCGAGACTACCAACTGTTCC 59.727 52.381 0.00 0.00 0.00 3.62
414 415 1.000506 GCGAGACTACCAACTGTTCCA 59.999 52.381 0.00 0.00 0.00 3.53
415 416 2.353803 GCGAGACTACCAACTGTTCCAT 60.354 50.000 0.00 0.00 0.00 3.41
416 417 3.864921 GCGAGACTACCAACTGTTCCATT 60.865 47.826 0.00 0.00 0.00 3.16
417 418 4.619863 GCGAGACTACCAACTGTTCCATTA 60.620 45.833 0.00 0.00 0.00 1.90
418 419 5.103000 CGAGACTACCAACTGTTCCATTAG 58.897 45.833 0.00 0.00 0.00 1.73
419 420 5.105877 CGAGACTACCAACTGTTCCATTAGA 60.106 44.000 0.00 0.00 0.00 2.10
420 421 6.571731 CGAGACTACCAACTGTTCCATTAGAA 60.572 42.308 0.00 0.00 0.00 2.10
421 422 6.702329 AGACTACCAACTGTTCCATTAGAAG 58.298 40.000 0.00 0.00 34.29 2.85
422 423 6.270231 AGACTACCAACTGTTCCATTAGAAGT 59.730 38.462 0.00 0.00 34.29 3.01
423 424 7.453752 AGACTACCAACTGTTCCATTAGAAGTA 59.546 37.037 0.00 0.00 34.29 2.24
424 425 7.612677 ACTACCAACTGTTCCATTAGAAGTAG 58.387 38.462 0.00 0.00 34.29 2.57
425 426 6.681729 ACCAACTGTTCCATTAGAAGTAGA 57.318 37.500 0.00 0.00 34.29 2.59
426 427 6.702329 ACCAACTGTTCCATTAGAAGTAGAG 58.298 40.000 0.00 0.00 34.29 2.43
427 428 6.497259 ACCAACTGTTCCATTAGAAGTAGAGA 59.503 38.462 0.00 0.00 34.29 3.10
428 429 6.814146 CCAACTGTTCCATTAGAAGTAGAGAC 59.186 42.308 0.00 0.00 34.29 3.36
429 430 7.310113 CCAACTGTTCCATTAGAAGTAGAGACT 60.310 40.741 0.00 0.00 37.59 3.24
430 431 7.399245 ACTGTTCCATTAGAAGTAGAGACTC 57.601 40.000 0.00 0.00 33.58 3.36
431 432 6.378848 ACTGTTCCATTAGAAGTAGAGACTCC 59.621 42.308 0.00 0.00 33.58 3.85
432 433 5.657302 TGTTCCATTAGAAGTAGAGACTCCC 59.343 44.000 0.00 0.00 33.58 4.30
433 434 5.735733 TCCATTAGAAGTAGAGACTCCCT 57.264 43.478 0.00 0.00 33.58 4.20
434 435 5.697067 TCCATTAGAAGTAGAGACTCCCTC 58.303 45.833 0.00 0.00 42.28 4.30
435 436 4.830600 CCATTAGAAGTAGAGACTCCCTCC 59.169 50.000 0.00 0.00 42.97 4.30
436 437 2.721425 AGAAGTAGAGACTCCCTCCG 57.279 55.000 0.00 0.00 42.97 4.63
437 438 1.917568 AGAAGTAGAGACTCCCTCCGT 59.082 52.381 0.00 0.00 42.97 4.69
438 439 2.092807 AGAAGTAGAGACTCCCTCCGTC 60.093 54.545 0.00 0.00 42.97 4.79
439 440 0.547553 AGTAGAGACTCCCTCCGTCC 59.452 60.000 0.00 0.00 42.97 4.79
440 441 0.466007 GTAGAGACTCCCTCCGTCCC 60.466 65.000 0.00 0.00 42.97 4.46
441 442 0.917821 TAGAGACTCCCTCCGTCCCA 60.918 60.000 0.00 0.00 42.97 4.37
442 443 1.075896 GAGACTCCCTCCGTCCCAT 60.076 63.158 0.00 0.00 35.87 4.00
443 444 0.185416 GAGACTCCCTCCGTCCCATA 59.815 60.000 0.00 0.00 35.87 2.74
444 445 0.635009 AGACTCCCTCCGTCCCATAA 59.365 55.000 0.00 0.00 31.83 1.90
445 446 1.220750 AGACTCCCTCCGTCCCATAAT 59.779 52.381 0.00 0.00 31.83 1.28
446 447 1.344763 GACTCCCTCCGTCCCATAATG 59.655 57.143 0.00 0.00 0.00 1.90
447 448 1.344087 ACTCCCTCCGTCCCATAATGT 60.344 52.381 0.00 0.00 0.00 2.71
448 449 2.090943 ACTCCCTCCGTCCCATAATGTA 60.091 50.000 0.00 0.00 0.00 2.29
449 450 2.969950 CTCCCTCCGTCCCATAATGTAA 59.030 50.000 0.00 0.00 0.00 2.41
450 451 3.386063 TCCCTCCGTCCCATAATGTAAA 58.614 45.455 0.00 0.00 0.00 2.01
451 452 3.781407 TCCCTCCGTCCCATAATGTAAAA 59.219 43.478 0.00 0.00 0.00 1.52
452 453 3.881089 CCCTCCGTCCCATAATGTAAAAC 59.119 47.826 0.00 0.00 0.00 2.43
453 454 3.558418 CCTCCGTCCCATAATGTAAAACG 59.442 47.826 0.00 0.00 0.00 3.60
454 455 4.186159 CTCCGTCCCATAATGTAAAACGT 58.814 43.478 0.00 0.00 0.00 3.99
455 456 4.577875 TCCGTCCCATAATGTAAAACGTT 58.422 39.130 0.00 0.00 0.00 3.99
456 457 5.002516 TCCGTCCCATAATGTAAAACGTTT 58.997 37.500 7.96 7.96 0.00 3.60
457 458 5.472820 TCCGTCCCATAATGTAAAACGTTTT 59.527 36.000 27.65 27.65 0.00 2.43
458 459 6.016443 TCCGTCCCATAATGTAAAACGTTTTT 60.016 34.615 29.42 15.16 0.00 1.94
503 504 6.651755 AAAACGTCTTACATTATGGTACGG 57.348 37.500 12.63 0.00 0.00 4.02
504 505 5.581126 AACGTCTTACATTATGGTACGGA 57.419 39.130 12.63 0.00 0.00 4.69
505 506 5.179045 ACGTCTTACATTATGGTACGGAG 57.821 43.478 12.63 0.00 0.00 4.63
506 507 4.037208 ACGTCTTACATTATGGTACGGAGG 59.963 45.833 12.63 5.53 0.00 4.30
507 508 4.558095 CGTCTTACATTATGGTACGGAGGG 60.558 50.000 0.00 0.00 0.00 4.30
508 509 4.586001 GTCTTACATTATGGTACGGAGGGA 59.414 45.833 0.00 0.00 0.00 4.20
509 510 4.831155 TCTTACATTATGGTACGGAGGGAG 59.169 45.833 0.00 0.00 0.00 4.30
510 511 1.692519 ACATTATGGTACGGAGGGAGC 59.307 52.381 0.00 0.00 0.00 4.70
511 512 1.691976 CATTATGGTACGGAGGGAGCA 59.308 52.381 0.00 0.00 0.00 4.26
512 513 1.410004 TTATGGTACGGAGGGAGCAG 58.590 55.000 0.00 0.00 0.00 4.24
513 514 1.113517 TATGGTACGGAGGGAGCAGC 61.114 60.000 0.00 0.00 0.00 5.25
514 515 2.760385 GGTACGGAGGGAGCAGCT 60.760 66.667 0.00 0.00 0.00 4.24
515 516 2.359967 GGTACGGAGGGAGCAGCTT 61.360 63.158 0.00 0.00 0.00 3.74
516 517 1.597461 GTACGGAGGGAGCAGCTTT 59.403 57.895 0.00 0.00 0.00 3.51
517 518 0.822164 GTACGGAGGGAGCAGCTTTA 59.178 55.000 0.00 0.00 0.00 1.85
518 519 1.206371 GTACGGAGGGAGCAGCTTTAA 59.794 52.381 0.00 0.00 0.00 1.52
519 520 0.250513 ACGGAGGGAGCAGCTTTAAG 59.749 55.000 0.00 0.00 0.00 1.85
520 521 0.250513 CGGAGGGAGCAGCTTTAAGT 59.749 55.000 0.00 0.00 0.00 2.24
521 522 1.740718 CGGAGGGAGCAGCTTTAAGTC 60.741 57.143 0.00 0.00 0.00 3.01
522 523 1.557371 GGAGGGAGCAGCTTTAAGTCT 59.443 52.381 0.00 0.00 0.00 3.24
523 524 2.766828 GGAGGGAGCAGCTTTAAGTCTA 59.233 50.000 0.00 0.00 0.00 2.59
524 525 3.197983 GGAGGGAGCAGCTTTAAGTCTAA 59.802 47.826 0.00 0.00 0.00 2.10
525 526 4.323562 GGAGGGAGCAGCTTTAAGTCTAAA 60.324 45.833 0.00 0.00 0.00 1.85
526 527 5.432645 GAGGGAGCAGCTTTAAGTCTAAAT 58.567 41.667 0.00 0.00 0.00 1.40
527 528 5.821097 AGGGAGCAGCTTTAAGTCTAAATT 58.179 37.500 0.00 0.00 0.00 1.82
528 529 6.249192 AGGGAGCAGCTTTAAGTCTAAATTT 58.751 36.000 0.00 0.00 0.00 1.82
529 530 6.721668 AGGGAGCAGCTTTAAGTCTAAATTTT 59.278 34.615 0.00 0.00 0.00 1.82
530 531 7.888546 AGGGAGCAGCTTTAAGTCTAAATTTTA 59.111 33.333 0.00 0.00 0.00 1.52
531 532 8.687242 GGGAGCAGCTTTAAGTCTAAATTTTAT 58.313 33.333 0.00 0.00 0.00 1.40
549 550 9.767228 AAATTTTATTTAACACCGTTAAGGCTT 57.233 25.926 4.58 4.58 46.52 4.35
554 555 9.676195 TTATTTAACACCGTTAAGGCTTAAAAC 57.324 29.630 20.57 11.55 46.52 2.43
555 556 3.883631 ACACCGTTAAGGCTTAAAACG 57.116 42.857 22.21 22.21 46.52 3.60
559 560 3.094339 CGTTAAGGCTTAAAACGGACG 57.906 47.619 20.57 15.39 41.60 4.79
560 561 2.159801 CGTTAAGGCTTAAAACGGACGG 60.160 50.000 20.57 2.54 41.60 4.79
561 562 3.066380 GTTAAGGCTTAAAACGGACGGA 58.934 45.455 20.57 0.00 0.00 4.69
562 563 2.259266 AAGGCTTAAAACGGACGGAA 57.741 45.000 0.00 0.00 0.00 4.30
563 564 1.804601 AGGCTTAAAACGGACGGAAG 58.195 50.000 0.00 0.00 0.00 3.46
594 595 7.467557 AAATGCATAAAATTTAGATGGCGTG 57.532 32.000 0.00 0.00 0.00 5.34
595 596 4.358851 TGCATAAAATTTAGATGGCGTGC 58.641 39.130 12.53 0.00 0.00 5.34
596 597 4.142293 TGCATAAAATTTAGATGGCGTGCA 60.142 37.500 12.53 4.44 36.62 4.57
597 598 4.984161 GCATAAAATTTAGATGGCGTGCAT 59.016 37.500 12.53 0.00 0.00 3.96
598 599 5.463061 GCATAAAATTTAGATGGCGTGCATT 59.537 36.000 12.53 0.00 0.00 3.56
599 600 6.562640 GCATAAAATTTAGATGGCGTGCATTG 60.563 38.462 12.53 0.00 0.00 2.82
600 601 3.441496 AATTTAGATGGCGTGCATTGG 57.559 42.857 0.00 0.00 0.00 3.16
601 602 2.121291 TTTAGATGGCGTGCATTGGA 57.879 45.000 0.00 0.00 0.00 3.53
602 603 1.378531 TTAGATGGCGTGCATTGGAC 58.621 50.000 0.00 0.00 0.00 4.02
603 604 0.463654 TAGATGGCGTGCATTGGACC 60.464 55.000 2.47 0.00 0.00 4.46
604 605 2.035469 ATGGCGTGCATTGGACCA 59.965 55.556 2.47 0.00 34.28 4.02
605 606 2.270297 GATGGCGTGCATTGGACCAC 62.270 60.000 2.47 0.00 32.13 4.16
606 607 3.747976 GGCGTGCATTGGACCACC 61.748 66.667 2.47 1.24 0.00 4.61
607 608 2.983030 GCGTGCATTGGACCACCA 60.983 61.111 2.47 0.00 45.34 4.17
608 609 2.342650 GCGTGCATTGGACCACCAT 61.343 57.895 2.47 0.00 46.34 3.55
609 610 1.876497 GCGTGCATTGGACCACCATT 61.876 55.000 2.47 0.00 46.34 3.16
610 611 1.458398 CGTGCATTGGACCACCATTA 58.542 50.000 2.47 0.00 46.34 1.90
622 623 1.341877 CCACCATTATCACCAAGGCCA 60.342 52.381 5.01 0.00 0.00 5.36
634 635 3.016736 ACCAAGGCCATTATCAAACTCG 58.983 45.455 5.01 0.00 0.00 4.18
673 690 0.033366 GCATCAAACCCAACCCACAC 59.967 55.000 0.00 0.00 0.00 3.82
677 694 0.396417 CAAACCCAACCCACACTGGA 60.396 55.000 0.00 0.00 40.96 3.86
760 777 1.073284 AGCCCAACACGGTAACAGATT 59.927 47.619 0.00 0.00 0.00 2.40
762 779 2.676342 GCCCAACACGGTAACAGATTAG 59.324 50.000 0.00 0.00 0.00 1.73
778 801 8.446599 AACAGATTAGAAAAAGAACCGAAAGA 57.553 30.769 0.00 0.00 0.00 2.52
791 814 3.326747 ACCGAAAGACACTGCTAATGAC 58.673 45.455 0.00 0.00 0.00 3.06
792 815 2.673368 CCGAAAGACACTGCTAATGACC 59.327 50.000 0.00 0.00 0.00 4.02
840 866 3.495670 TTTGACAAATTAATCCCCGCG 57.504 42.857 0.00 0.00 0.00 6.46
841 867 2.404923 TGACAAATTAATCCCCGCGA 57.595 45.000 8.23 0.00 0.00 5.87
852 878 2.702592 TCCCCGCGAGTTAATCAAAT 57.297 45.000 8.23 0.00 0.00 2.32
854 880 4.139859 TCCCCGCGAGTTAATCAAATTA 57.860 40.909 8.23 0.00 0.00 1.40
856 882 5.127491 TCCCCGCGAGTTAATCAAATTAAT 58.873 37.500 8.23 0.00 37.11 1.40
857 883 5.237779 TCCCCGCGAGTTAATCAAATTAATC 59.762 40.000 8.23 0.00 37.11 1.75
886 931 0.796491 CAAGCGAGCGAGACAGAGAC 60.796 60.000 0.00 0.00 0.00 3.36
891 936 1.732941 GAGCGAGACAGAGACAGAGA 58.267 55.000 0.00 0.00 0.00 3.10
892 937 1.665679 GAGCGAGACAGAGACAGAGAG 59.334 57.143 0.00 0.00 0.00 3.20
893 938 1.277842 AGCGAGACAGAGACAGAGAGA 59.722 52.381 0.00 0.00 0.00 3.10
894 939 1.665679 GCGAGACAGAGACAGAGAGAG 59.334 57.143 0.00 0.00 0.00 3.20
895 940 2.279741 CGAGACAGAGACAGAGAGAGG 58.720 57.143 0.00 0.00 0.00 3.69
896 941 2.017049 GAGACAGAGACAGAGAGAGGC 58.983 57.143 0.00 0.00 0.00 4.70
897 942 0.732571 GACAGAGACAGAGAGAGGCG 59.267 60.000 0.00 0.00 0.00 5.52
900 945 2.757917 AGACAGAGAGAGGCGGGC 60.758 66.667 0.00 0.00 0.00 6.13
969 1014 2.982130 GGCGAGGGAGAAAGCTCA 59.018 61.111 0.00 0.00 43.14 4.26
1160 1226 4.217159 CTACCGCCCCAGGTACGC 62.217 72.222 0.00 0.00 43.89 4.42
1180 1246 2.430921 CGCGTCTCGTGGCTTCTT 60.431 61.111 0.00 0.00 33.47 2.52
1184 1250 1.079057 GTCTCGTGGCTTCTTCCCC 60.079 63.158 0.00 0.00 0.00 4.81
1188 1254 4.035102 GTGGCTTCTTCCCCGCCT 62.035 66.667 0.00 0.00 44.09 5.52
1295 1361 0.972983 TCTGTCTCAGCTGGTAGCCC 60.973 60.000 15.13 0.00 43.77 5.19
1303 1369 0.921256 AGCTGGTAGCCCCTGGAATT 60.921 55.000 0.00 0.00 43.77 2.17
1331 1397 5.044428 TCTTCTTGTCGCTGTAGTCTAAC 57.956 43.478 0.00 0.00 0.00 2.34
1334 1400 0.179207 TGTCGCTGTAGTCTAACGCG 60.179 55.000 3.53 3.53 40.85 6.01
1377 1443 1.002011 GGGGTTCTGCTCTCCAACC 60.002 63.158 0.00 0.00 39.18 3.77
1388 1454 1.133407 CTCTCCAACCTCGTCTGCTAC 59.867 57.143 0.00 0.00 0.00 3.58
1407 1473 5.241064 TGCTACTAGTTGATTAGGGATCGAC 59.759 44.000 8.60 0.00 45.80 4.20
1496 1576 0.478072 TGCAACCCCTGTCTGTCATT 59.522 50.000 0.00 0.00 0.00 2.57
1504 1584 4.192317 CCCCTGTCTGTCATTTTAGCTAC 58.808 47.826 0.00 0.00 0.00 3.58
1552 1633 2.427320 TGCACAGCACCAGAGGTC 59.573 61.111 0.00 0.00 31.02 3.85
1554 1635 1.227943 GCACAGCACCAGAGGTCAA 60.228 57.895 0.00 0.00 31.02 3.18
1555 1636 1.233285 GCACAGCACCAGAGGTCAAG 61.233 60.000 0.00 0.00 31.02 3.02
1557 1638 0.839946 ACAGCACCAGAGGTCAAGTT 59.160 50.000 0.00 0.00 31.02 2.66
1561 1642 1.623811 GCACCAGAGGTCAAGTTCCTA 59.376 52.381 0.00 0.00 35.20 2.94
1562 1643 2.613223 GCACCAGAGGTCAAGTTCCTAC 60.613 54.545 0.00 0.00 35.20 3.18
1564 1645 2.900546 ACCAGAGGTCAAGTTCCTACTG 59.099 50.000 0.00 0.00 35.20 2.74
1565 1646 2.900546 CCAGAGGTCAAGTTCCTACTGT 59.099 50.000 0.00 0.00 35.20 3.55
1566 1647 3.306364 CCAGAGGTCAAGTTCCTACTGTG 60.306 52.174 0.00 0.00 35.20 3.66
1581 1678 7.334844 TCCTACTGTGTCTATTGTATCAGTG 57.665 40.000 0.00 0.00 36.89 3.66
1605 1797 5.450550 GCCAAGTTTAGTTCTTGCAGTTCTT 60.451 40.000 0.00 0.00 40.35 2.52
1607 1799 7.132863 CCAAGTTTAGTTCTTGCAGTTCTTAC 58.867 38.462 0.00 0.00 40.35 2.34
1621 1813 8.213518 TGCAGTTCTTACTTCATTAATGGATC 57.786 34.615 15.36 3.50 30.26 3.36
1623 1815 9.547753 GCAGTTCTTACTTCATTAATGGATCTA 57.452 33.333 15.36 0.00 30.26 1.98
1664 1856 3.774144 AAAAAGAGAAGGCCAGGGG 57.226 52.632 5.01 0.00 0.00 4.79
1679 1871 4.081050 GGGGGTGTTCTGTTCTGC 57.919 61.111 0.00 0.00 0.00 4.26
1680 1872 1.456287 GGGGGTGTTCTGTTCTGCT 59.544 57.895 0.00 0.00 0.00 4.24
1681 1873 0.178990 GGGGGTGTTCTGTTCTGCTT 60.179 55.000 0.00 0.00 0.00 3.91
1702 1894 4.861389 TTGTTTGCTGCATTGACTTTTG 57.139 36.364 1.84 0.00 0.00 2.44
1703 1895 2.608546 TGTTTGCTGCATTGACTTTTGC 59.391 40.909 1.84 0.00 39.33 3.68
1705 1897 0.751452 TGCTGCATTGACTTTTGCCA 59.249 45.000 0.00 0.00 38.08 4.92
1706 1898 1.138464 TGCTGCATTGACTTTTGCCAA 59.862 42.857 0.00 0.00 38.08 4.52
1707 1899 2.224329 TGCTGCATTGACTTTTGCCAAT 60.224 40.909 0.00 0.00 38.08 3.16
1711 1915 5.171147 TGCATTGACTTTTGCCAATTTTG 57.829 34.783 0.00 0.00 38.08 2.44
1713 1917 4.971220 GCATTGACTTTTGCCAATTTTGTG 59.029 37.500 0.00 0.00 29.99 3.33
1715 1919 5.542616 TTGACTTTTGCCAATTTTGTGTG 57.457 34.783 0.00 0.00 0.00 3.82
1716 1920 3.373439 TGACTTTTGCCAATTTTGTGTGC 59.627 39.130 0.00 0.00 0.00 4.57
1719 1923 4.458642 ACTTTTGCCAATTTTGTGTGCTTT 59.541 33.333 0.00 0.00 0.00 3.51
1760 1965 5.451381 GGGTTAACTGGGTCTGTTTCTTTTG 60.451 44.000 5.42 0.00 0.00 2.44
1799 2004 1.068921 GAGCGAGATCAAGGCCCTC 59.931 63.158 0.00 0.00 0.00 4.30
1865 2070 3.825585 TCATTGTTCAGCTGTTATTGGCA 59.174 39.130 14.67 1.02 0.00 4.92
2006 2211 3.889196 TGTGAAGAAAACCGTACATGC 57.111 42.857 0.00 0.00 0.00 4.06
2046 2251 3.146847 CCTTCTGGTTAGTTCCCAACAC 58.853 50.000 0.00 0.00 0.00 3.32
2047 2252 2.943036 TCTGGTTAGTTCCCAACACC 57.057 50.000 0.00 0.00 0.00 4.16
2048 2253 2.128535 TCTGGTTAGTTCCCAACACCA 58.871 47.619 0.00 0.00 35.73 4.17
2049 2254 2.510382 TCTGGTTAGTTCCCAACACCAA 59.490 45.455 0.00 0.00 37.12 3.67
2050 2255 2.621526 CTGGTTAGTTCCCAACACCAAC 59.378 50.000 0.00 0.00 37.12 3.77
2051 2256 2.025226 TGGTTAGTTCCCAACACCAACA 60.025 45.455 0.00 0.00 35.32 3.33
2099 2305 0.036388 TAAGCTTCGTTCTGCCCCAG 60.036 55.000 0.00 0.00 0.00 4.45
2151 2357 2.555325 ACCAACGTCACGAGATCAAGTA 59.445 45.455 2.91 0.00 0.00 2.24
2157 2363 3.487544 CGTCACGAGATCAAGTATGCTCA 60.488 47.826 0.00 0.00 0.00 4.26
2162 2385 4.158579 ACGAGATCAAGTATGCTCAGTTCA 59.841 41.667 0.00 0.00 0.00 3.18
2201 2424 0.323629 GTGTAGTGGGCAGTGGCTTA 59.676 55.000 17.16 3.32 40.87 3.09
2217 2440 7.384932 GCAGTGGCTTAACAACATAAAGAAAAT 59.615 33.333 0.00 0.00 36.96 1.82
2218 2441 8.702438 CAGTGGCTTAACAACATAAAGAAAATG 58.298 33.333 0.00 0.00 0.00 2.32
2502 2725 4.823442 TCAGTCCTTGGCATGCATAATTAG 59.177 41.667 21.36 6.51 0.00 1.73
2526 2749 8.457238 AGTAAGAGATTTATGGGAAGCAATTC 57.543 34.615 0.00 0.00 0.00 2.17
2571 2794 7.604927 TCACTGCACCGAATTAGTATAGTTTTT 59.395 33.333 0.00 0.00 0.00 1.94
2587 2818 5.248380 AGTTTTTAGGGTGATCTGCTCTT 57.752 39.130 0.00 0.00 0.00 2.85
2687 2919 6.910972 TCAAACTATACTTTGATCTACTCGCG 59.089 38.462 0.00 0.00 35.63 5.87
2696 2928 3.845178 TGATCTACTCGCGTTGTTCAAT 58.155 40.909 5.77 1.71 0.00 2.57
2705 2938 2.976509 CGCGTTGTTCAATTGTTATGCA 59.023 40.909 5.13 0.00 0.00 3.96
2845 3176 6.150976 CCTCAAGTGCTTTTGTATGGATTACA 59.849 38.462 1.64 0.00 39.07 2.41
3214 3559 8.896320 TTATGCGCCAACTATTTAATCTCTTA 57.104 30.769 4.18 0.00 0.00 2.10
3290 3635 4.442893 GGGGAAAGAAGGAAAAGGTTTGTG 60.443 45.833 0.00 0.00 0.00 3.33
3291 3636 4.161565 GGGAAAGAAGGAAAAGGTTTGTGT 59.838 41.667 0.00 0.00 0.00 3.72
3378 3732 9.060347 TGATTCTATTGAAATGCATCTTACTCC 57.940 33.333 0.00 0.00 35.63 3.85
3379 3733 7.482654 TTCTATTGAAATGCATCTTACTCCG 57.517 36.000 0.00 0.00 0.00 4.63
3380 3734 6.582636 TCTATTGAAATGCATCTTACTCCGT 58.417 36.000 0.00 0.00 0.00 4.69
3381 3735 5.741388 ATTGAAATGCATCTTACTCCGTC 57.259 39.130 0.00 0.00 0.00 4.79
3382 3736 3.531538 TGAAATGCATCTTACTCCGTCC 58.468 45.455 0.00 0.00 0.00 4.79
3383 3737 2.225068 AATGCATCTTACTCCGTCCG 57.775 50.000 0.00 0.00 0.00 4.79
3384 3738 1.112113 ATGCATCTTACTCCGTCCGT 58.888 50.000 0.00 0.00 0.00 4.69
3385 3739 0.892755 TGCATCTTACTCCGTCCGTT 59.107 50.000 0.00 0.00 0.00 4.44
3386 3740 1.135199 TGCATCTTACTCCGTCCGTTC 60.135 52.381 0.00 0.00 0.00 3.95
3387 3741 1.823828 CATCTTACTCCGTCCGTTCG 58.176 55.000 0.00 0.00 0.00 3.95
3398 3752 2.331194 CGTCCGTTCGGAAATACTTGT 58.669 47.619 15.59 0.00 35.89 3.16
3399 3753 2.343544 CGTCCGTTCGGAAATACTTGTC 59.656 50.000 15.59 0.00 35.89 3.18
3400 3754 2.669924 GTCCGTTCGGAAATACTTGTCC 59.330 50.000 15.59 0.00 35.89 4.02
3401 3755 2.564062 TCCGTTCGGAAATACTTGTCCT 59.436 45.455 11.66 0.00 0.00 3.85
3402 3756 3.763360 TCCGTTCGGAAATACTTGTCCTA 59.237 43.478 11.66 0.00 0.00 2.94
3403 3757 4.110482 CCGTTCGGAAATACTTGTCCTAG 58.890 47.826 5.19 0.00 0.00 3.02
3404 3758 4.142315 CCGTTCGGAAATACTTGTCCTAGA 60.142 45.833 5.19 0.00 0.00 2.43
3405 3759 5.404946 CGTTCGGAAATACTTGTCCTAGAA 58.595 41.667 0.00 0.00 0.00 2.10
3406 3760 5.865552 CGTTCGGAAATACTTGTCCTAGAAA 59.134 40.000 0.00 0.00 0.00 2.52
3407 3761 6.534079 CGTTCGGAAATACTTGTCCTAGAAAT 59.466 38.462 0.00 0.00 0.00 2.17
3408 3762 7.464178 CGTTCGGAAATACTTGTCCTAGAAATG 60.464 40.741 0.00 0.00 0.00 2.32
3409 3763 6.346096 TCGGAAATACTTGTCCTAGAAATGG 58.654 40.000 0.00 0.00 0.00 3.16
3410 3764 6.070424 TCGGAAATACTTGTCCTAGAAATGGT 60.070 38.462 0.00 0.00 0.00 3.55
3411 3765 6.598064 CGGAAATACTTGTCCTAGAAATGGTT 59.402 38.462 0.00 0.00 0.00 3.67
3412 3766 7.414098 CGGAAATACTTGTCCTAGAAATGGTTG 60.414 40.741 0.00 0.00 0.00 3.77
3413 3767 7.393515 GGAAATACTTGTCCTAGAAATGGTTGT 59.606 37.037 0.00 0.00 0.00 3.32
3414 3768 9.444600 GAAATACTTGTCCTAGAAATGGTTGTA 57.555 33.333 0.00 0.00 0.00 2.41
3415 3769 9.975218 AAATACTTGTCCTAGAAATGGTTGTAT 57.025 29.630 0.00 0.00 0.00 2.29
3416 3770 9.614792 AATACTTGTCCTAGAAATGGTTGTATC 57.385 33.333 0.00 0.00 0.00 2.24
3417 3771 7.259088 ACTTGTCCTAGAAATGGTTGTATCT 57.741 36.000 0.00 0.00 0.00 1.98
3418 3772 8.375493 ACTTGTCCTAGAAATGGTTGTATCTA 57.625 34.615 0.00 0.00 0.00 1.98
3419 3773 8.478877 ACTTGTCCTAGAAATGGTTGTATCTAG 58.521 37.037 0.00 0.00 40.55 2.43
3420 3774 8.603898 TTGTCCTAGAAATGGTTGTATCTAGA 57.396 34.615 9.60 0.00 42.48 2.43
3421 3775 8.783660 TGTCCTAGAAATGGTTGTATCTAGAT 57.216 34.615 10.73 10.73 42.48 1.98
3422 3776 9.877222 TGTCCTAGAAATGGTTGTATCTAGATA 57.123 33.333 8.44 8.44 42.48 1.98
3439 3793 8.783660 ATCTAGATACAACCATTTCTAGGACA 57.216 34.615 2.53 0.00 38.67 4.02
3440 3794 8.603898 TCTAGATACAACCATTTCTAGGACAA 57.396 34.615 6.10 0.00 38.67 3.18
3441 3795 8.696374 TCTAGATACAACCATTTCTAGGACAAG 58.304 37.037 6.10 0.00 38.67 3.16
3442 3796 7.259088 AGATACAACCATTTCTAGGACAAGT 57.741 36.000 0.00 0.00 0.00 3.16
3443 3797 8.375493 AGATACAACCATTTCTAGGACAAGTA 57.625 34.615 0.00 0.00 0.00 2.24
3444 3798 8.993424 AGATACAACCATTTCTAGGACAAGTAT 58.007 33.333 0.00 0.00 0.00 2.12
3445 3799 9.614792 GATACAACCATTTCTAGGACAAGTATT 57.385 33.333 0.00 0.00 0.00 1.89
3446 3800 9.975218 ATACAACCATTTCTAGGACAAGTATTT 57.025 29.630 0.00 0.00 0.00 1.40
3447 3801 8.336801 ACAACCATTTCTAGGACAAGTATTTC 57.663 34.615 0.00 0.00 0.00 2.17
3448 3802 7.393515 ACAACCATTTCTAGGACAAGTATTTCC 59.606 37.037 0.00 0.00 0.00 3.13
3449 3803 6.113411 ACCATTTCTAGGACAAGTATTTCCG 58.887 40.000 0.00 0.00 36.95 4.30
3450 3804 6.070424 ACCATTTCTAGGACAAGTATTTCCGA 60.070 38.462 0.00 0.00 36.95 4.55
3451 3805 6.821665 CCATTTCTAGGACAAGTATTTCCGAA 59.178 38.462 0.00 0.00 36.95 4.30
3452 3806 7.201617 CCATTTCTAGGACAAGTATTTCCGAAC 60.202 40.741 0.00 0.00 36.95 3.95
3453 3807 4.990257 TCTAGGACAAGTATTTCCGAACG 58.010 43.478 0.00 0.00 36.95 3.95
3454 3808 2.968675 AGGACAAGTATTTCCGAACGG 58.031 47.619 6.94 6.94 36.95 4.44
3455 3809 2.564062 AGGACAAGTATTTCCGAACGGA 59.436 45.455 12.04 12.04 43.52 4.69
3456 3810 2.928116 GGACAAGTATTTCCGAACGGAG 59.072 50.000 15.34 5.60 46.06 4.63
3457 3811 2.928116 GACAAGTATTTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
3458 3812 2.277084 CAAGTATTTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
3459 3813 1.856629 AGTATTTCCGAACGGAGGGA 58.143 50.000 15.34 7.17 46.06 4.20
3460 3814 1.755380 AGTATTTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
3461 3815 1.479730 GTATTTCCGAACGGAGGGAGT 59.520 52.381 15.34 1.96 46.06 3.85
3462 3816 1.856629 ATTTCCGAACGGAGGGAGTA 58.143 50.000 15.34 0.00 46.06 2.59
3609 3967 5.255397 AGGTTGATTAACATCCAGGAACA 57.745 39.130 2.50 0.00 39.94 3.18
3660 4020 2.298729 GCAGATCTGGAGTGGATAGACC 59.701 54.545 23.89 0.00 39.54 3.85
3696 4140 7.873719 TGGTCCTTTATTGTTACCATGTATG 57.126 36.000 0.00 0.00 35.34 2.39
3807 4263 6.064060 TCTTTGTTGGTTGATTGATCAGAGT 58.936 36.000 0.00 0.00 38.19 3.24
3819 4277 8.777865 TGATTGATCAGAGTTTACTTTAGTGG 57.222 34.615 0.00 0.00 32.11 4.00
3914 4372 1.625818 CCTGGTACTGCTCCTTTCAGT 59.374 52.381 1.18 1.18 45.71 3.41
3962 4420 7.611213 AGAACTATCCAAGTCATTTAAACCG 57.389 36.000 0.00 0.00 37.50 4.44
4366 4824 2.551459 ACATCTCACAAGTTGCTCAAGC 59.449 45.455 1.81 0.00 42.50 4.01
4391 4849 7.389053 GCTATGTGAATCCAAGAGGGTTATTAG 59.611 40.741 0.00 0.00 38.73 1.73
4392 4850 6.636454 TGTGAATCCAAGAGGGTTATTAGT 57.364 37.500 0.00 0.00 38.73 2.24
4631 5091 2.437281 AGATGAGAAAGCATCCACCGAT 59.563 45.455 0.00 0.00 44.47 4.18
4701 5161 2.543012 CGCAAATCTAGGATCTGCACAG 59.457 50.000 6.63 0.00 33.19 3.66
4702 5162 3.539604 GCAAATCTAGGATCTGCACAGT 58.460 45.455 1.55 0.00 33.19 3.55
4703 5163 3.311871 GCAAATCTAGGATCTGCACAGTG 59.688 47.826 0.00 0.00 33.19 3.66
4704 5164 2.906691 ATCTAGGATCTGCACAGTGC 57.093 50.000 19.37 19.37 45.29 4.40
4718 5178 2.350804 CACAGTGCACATCTAGTCATGC 59.649 50.000 21.04 7.60 38.59 4.06
4725 5185 4.141869 TGCACATCTAGTCATGCACATAGT 60.142 41.667 11.71 0.00 42.92 2.12
4726 5186 4.813161 GCACATCTAGTCATGCACATAGTT 59.187 41.667 0.00 0.00 38.00 2.24
4985 5445 4.725490 TGCAGGAGCTAAAAACCTACTTT 58.275 39.130 0.00 0.00 42.74 2.66
5042 5502 3.891366 TCATGTTCTGCTCGAGGATATCA 59.109 43.478 15.58 9.90 0.00 2.15
5086 5546 0.894835 AACATTTGAATCCCACGGGC 59.105 50.000 0.00 0.00 34.68 6.13
5092 5552 1.153249 GAATCCCACGGGCGAATCA 60.153 57.895 0.00 0.00 34.68 2.57
5219 5679 2.203625 GGGGCAACTTTGGAGGCA 60.204 61.111 0.00 0.00 0.00 4.75
5272 5732 1.342174 AGAATGGTGTTTTGCAGCCTG 59.658 47.619 0.00 0.00 44.44 4.85
5293 5753 6.462500 CCTGTGCTTAGATGCTAGATGTATT 58.538 40.000 0.00 0.00 0.00 1.89
5344 5810 8.936864 GTCATAAATGTAAGTTGTAGAGCTGTT 58.063 33.333 0.00 0.00 0.00 3.16
5564 6031 3.607422 TCACTGAAATGTTGAACTGCG 57.393 42.857 0.00 0.00 0.00 5.18
5578 6045 6.147164 TGTTGAACTGCGGTCTAATTTCTTAG 59.853 38.462 0.00 0.00 36.46 2.18
5807 6276 6.480524 CTGTAATACAGCACAGCAAAGTAA 57.519 37.500 7.55 0.00 39.62 2.24
5820 6289 6.706270 CACAGCAAAGTAAAGGAGAAGAAGTA 59.294 38.462 0.00 0.00 0.00 2.24
5834 6303 9.875708 AGGAGAAGAAGTATGAACTCATATACT 57.124 33.333 2.85 0.00 40.53 2.12
5838 6307 8.879342 AAGAAGTATGAACTCATATACTGCAC 57.121 34.615 2.85 0.00 40.53 4.57
5848 6317 7.776933 ACTCATATACTGCACACATACAAAG 57.223 36.000 0.00 0.00 0.00 2.77
5849 6318 7.331026 ACTCATATACTGCACACATACAAAGT 58.669 34.615 0.00 0.00 0.00 2.66
5850 6319 7.492669 ACTCATATACTGCACACATACAAAGTC 59.507 37.037 0.00 0.00 0.00 3.01
5851 6320 7.555965 TCATATACTGCACACATACAAAGTCT 58.444 34.615 0.00 0.00 0.00 3.24
5852 6321 7.492344 TCATATACTGCACACATACAAAGTCTG 59.508 37.037 0.00 0.00 0.00 3.51
5853 6322 4.071961 ACTGCACACATACAAAGTCTGA 57.928 40.909 0.00 0.00 0.00 3.27
5855 6324 4.273480 ACTGCACACATACAAAGTCTGAAC 59.727 41.667 0.00 0.00 0.00 3.18
5856 6325 4.450976 TGCACACATACAAAGTCTGAACT 58.549 39.130 0.00 0.00 37.32 3.01
5914 6383 3.315191 ACAATATTTCCCATTTCTCGCCG 59.685 43.478 0.00 0.00 0.00 6.46
5917 6386 1.448985 TTTCCCATTTCTCGCCGAAG 58.551 50.000 0.00 0.00 32.21 3.79
6044 6513 4.568072 AACCACAAGCATCACTATACCA 57.432 40.909 0.00 0.00 0.00 3.25
6139 6608 0.957395 ACACGCTGCATGAGAAAGGG 60.957 55.000 1.44 0.00 0.00 3.95
6143 6612 1.135575 CGCTGCATGAGAAAGGGTTTC 60.136 52.381 0.00 0.00 39.96 2.78
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.287525 TCGTTTCCATGCATGATGATAGTAA 58.712 36.000 28.31 7.24 33.31 2.24
1 2 5.852827 TCGTTTCCATGCATGATGATAGTA 58.147 37.500 28.31 0.89 33.31 1.82
3 4 5.678132 TTCGTTTCCATGCATGATGATAG 57.322 39.130 28.31 13.73 33.31 2.08
5 6 4.581409 TGATTCGTTTCCATGCATGATGAT 59.419 37.500 28.31 11.01 33.31 2.45
6 7 3.946558 TGATTCGTTTCCATGCATGATGA 59.053 39.130 28.31 15.58 33.31 2.92
7 8 4.295857 TGATTCGTTTCCATGCATGATG 57.704 40.909 28.31 13.47 0.00 3.07
8 9 6.638096 TTATGATTCGTTTCCATGCATGAT 57.362 33.333 28.31 11.29 0.00 2.45
9 10 6.318396 TCTTTATGATTCGTTTCCATGCATGA 59.682 34.615 28.31 11.26 0.00 3.07
10 11 6.497437 TCTTTATGATTCGTTTCCATGCATG 58.503 36.000 20.19 20.19 0.00 4.06
11 12 6.698008 TCTTTATGATTCGTTTCCATGCAT 57.302 33.333 0.00 0.00 0.00 3.96
12 13 6.507958 TTCTTTATGATTCGTTTCCATGCA 57.492 33.333 0.00 0.00 0.00 3.96
13 14 7.810766 TTTTCTTTATGATTCGTTTCCATGC 57.189 32.000 0.00 0.00 0.00 4.06
14 15 9.624697 TCTTTTTCTTTATGATTCGTTTCCATG 57.375 29.630 0.00 0.00 0.00 3.66
53 54 8.763601 AGATTGGAAGCTTTCTATAAGTGTAGT 58.236 33.333 6.25 0.00 0.00 2.73
54 55 9.255304 GAGATTGGAAGCTTTCTATAAGTGTAG 57.745 37.037 6.25 0.00 0.00 2.74
55 56 8.982723 AGAGATTGGAAGCTTTCTATAAGTGTA 58.017 33.333 6.25 0.00 0.00 2.90
56 57 7.768120 CAGAGATTGGAAGCTTTCTATAAGTGT 59.232 37.037 6.25 0.00 0.00 3.55
57 58 7.254727 GCAGAGATTGGAAGCTTTCTATAAGTG 60.255 40.741 6.25 3.53 0.00 3.16
58 59 6.765512 GCAGAGATTGGAAGCTTTCTATAAGT 59.234 38.462 6.25 0.00 0.00 2.24
59 60 6.991531 AGCAGAGATTGGAAGCTTTCTATAAG 59.008 38.462 6.25 0.00 29.98 1.73
60 61 6.893583 AGCAGAGATTGGAAGCTTTCTATAA 58.106 36.000 6.25 0.00 29.98 0.98
61 62 6.491714 AGCAGAGATTGGAAGCTTTCTATA 57.508 37.500 6.25 0.00 29.98 1.31
62 63 5.370875 AGCAGAGATTGGAAGCTTTCTAT 57.629 39.130 6.25 3.50 29.98 1.98
63 64 4.833478 AGCAGAGATTGGAAGCTTTCTA 57.167 40.909 6.25 0.00 29.98 2.10
64 65 3.717452 AGCAGAGATTGGAAGCTTTCT 57.283 42.857 6.25 1.80 29.98 2.52
65 66 5.121811 TGATAGCAGAGATTGGAAGCTTTC 58.878 41.667 0.00 0.00 36.80 2.62
66 67 5.108187 TGATAGCAGAGATTGGAAGCTTT 57.892 39.130 0.00 0.00 36.80 3.51
67 68 4.767578 TGATAGCAGAGATTGGAAGCTT 57.232 40.909 0.00 0.00 36.80 3.74
68 69 4.767578 TTGATAGCAGAGATTGGAAGCT 57.232 40.909 0.00 0.00 39.22 3.74
69 70 4.637534 TGTTTGATAGCAGAGATTGGAAGC 59.362 41.667 0.00 0.00 0.00 3.86
70 71 5.879223 ACTGTTTGATAGCAGAGATTGGAAG 59.121 40.000 0.00 0.00 36.62 3.46
71 72 5.809001 ACTGTTTGATAGCAGAGATTGGAA 58.191 37.500 0.00 0.00 36.62 3.53
72 73 5.426689 ACTGTTTGATAGCAGAGATTGGA 57.573 39.130 0.00 0.00 36.62 3.53
73 74 6.373774 AGAAACTGTTTGATAGCAGAGATTGG 59.626 38.462 11.03 0.00 36.62 3.16
74 75 7.242079 CAGAAACTGTTTGATAGCAGAGATTG 58.758 38.462 11.03 0.00 36.62 2.67
75 76 6.128063 GCAGAAACTGTTTGATAGCAGAGATT 60.128 38.462 11.03 0.00 36.62 2.40
76 77 5.353678 GCAGAAACTGTTTGATAGCAGAGAT 59.646 40.000 11.03 0.00 36.62 2.75
77 78 4.692625 GCAGAAACTGTTTGATAGCAGAGA 59.307 41.667 11.03 0.00 36.62 3.10
78 79 4.142730 GGCAGAAACTGTTTGATAGCAGAG 60.143 45.833 11.03 0.00 36.62 3.35
79 80 3.753272 GGCAGAAACTGTTTGATAGCAGA 59.247 43.478 11.03 0.00 36.62 4.26
80 81 3.119708 GGGCAGAAACTGTTTGATAGCAG 60.120 47.826 11.03 0.00 38.58 4.24
81 82 2.819608 GGGCAGAAACTGTTTGATAGCA 59.180 45.455 11.03 0.00 33.43 3.49
82 83 2.819608 TGGGCAGAAACTGTTTGATAGC 59.180 45.455 11.03 8.56 33.43 2.97
83 84 5.221224 TGTTTGGGCAGAAACTGTTTGATAG 60.221 40.000 11.03 0.00 36.86 2.08
84 85 4.646945 TGTTTGGGCAGAAACTGTTTGATA 59.353 37.500 11.03 0.00 36.86 2.15
85 86 3.450457 TGTTTGGGCAGAAACTGTTTGAT 59.550 39.130 11.03 0.00 36.86 2.57
86 87 2.828520 TGTTTGGGCAGAAACTGTTTGA 59.171 40.909 11.03 0.00 36.86 2.69
87 88 3.244033 TGTTTGGGCAGAAACTGTTTG 57.756 42.857 11.03 0.00 36.86 2.93
88 89 3.369366 CCTTGTTTGGGCAGAAACTGTTT 60.369 43.478 5.29 5.29 36.86 2.83
89 90 2.168313 CCTTGTTTGGGCAGAAACTGTT 59.832 45.455 11.30 0.00 36.86 3.16
90 91 1.756538 CCTTGTTTGGGCAGAAACTGT 59.243 47.619 11.30 0.00 36.86 3.55
91 92 2.031120 TCCTTGTTTGGGCAGAAACTG 58.969 47.619 11.30 0.00 36.86 3.16
92 93 2.452600 TCCTTGTTTGGGCAGAAACT 57.547 45.000 11.30 0.00 36.86 2.66
93 94 2.224042 CCTTCCTTGTTTGGGCAGAAAC 60.224 50.000 4.81 4.81 36.53 2.78
94 95 2.038659 CCTTCCTTGTTTGGGCAGAAA 58.961 47.619 0.00 0.00 0.00 2.52
95 96 1.216678 TCCTTCCTTGTTTGGGCAGAA 59.783 47.619 0.00 0.00 0.00 3.02
96 97 0.850100 TCCTTCCTTGTTTGGGCAGA 59.150 50.000 0.00 0.00 0.00 4.26
97 98 1.703411 TTCCTTCCTTGTTTGGGCAG 58.297 50.000 0.00 0.00 0.00 4.85
98 99 2.038659 CTTTCCTTCCTTGTTTGGGCA 58.961 47.619 0.00 0.00 0.00 5.36
99 100 2.039418 ACTTTCCTTCCTTGTTTGGGC 58.961 47.619 0.00 0.00 0.00 5.36
100 101 5.279456 CCATAACTTTCCTTCCTTGTTTGGG 60.279 44.000 0.00 0.00 0.00 4.12
101 102 5.538433 TCCATAACTTTCCTTCCTTGTTTGG 59.462 40.000 0.00 0.00 0.00 3.28
102 103 6.447162 GTCCATAACTTTCCTTCCTTGTTTG 58.553 40.000 0.00 0.00 0.00 2.93
103 104 5.240844 CGTCCATAACTTTCCTTCCTTGTTT 59.759 40.000 0.00 0.00 0.00 2.83
104 105 4.760204 CGTCCATAACTTTCCTTCCTTGTT 59.240 41.667 0.00 0.00 0.00 2.83
105 106 4.202430 ACGTCCATAACTTTCCTTCCTTGT 60.202 41.667 0.00 0.00 0.00 3.16
106 107 4.154195 CACGTCCATAACTTTCCTTCCTTG 59.846 45.833 0.00 0.00 0.00 3.61
107 108 4.041198 TCACGTCCATAACTTTCCTTCCTT 59.959 41.667 0.00 0.00 0.00 3.36
108 109 3.581332 TCACGTCCATAACTTTCCTTCCT 59.419 43.478 0.00 0.00 0.00 3.36
109 110 3.934068 TCACGTCCATAACTTTCCTTCC 58.066 45.455 0.00 0.00 0.00 3.46
110 111 5.220416 CGAATCACGTCCATAACTTTCCTTC 60.220 44.000 0.00 0.00 37.22 3.46
111 112 4.630069 CGAATCACGTCCATAACTTTCCTT 59.370 41.667 0.00 0.00 37.22 3.36
112 113 4.181578 CGAATCACGTCCATAACTTTCCT 58.818 43.478 0.00 0.00 37.22 3.36
113 114 3.308866 CCGAATCACGTCCATAACTTTCC 59.691 47.826 0.00 0.00 40.78 3.13
114 115 4.178540 TCCGAATCACGTCCATAACTTTC 58.821 43.478 0.00 0.00 40.78 2.62
115 116 4.196626 TCCGAATCACGTCCATAACTTT 57.803 40.909 0.00 0.00 40.78 2.66
116 117 3.880047 TCCGAATCACGTCCATAACTT 57.120 42.857 0.00 0.00 40.78 2.66
117 118 3.430374 CCTTCCGAATCACGTCCATAACT 60.430 47.826 0.00 0.00 40.78 2.24
118 119 2.864343 CCTTCCGAATCACGTCCATAAC 59.136 50.000 0.00 0.00 40.78 1.89
119 120 2.761767 TCCTTCCGAATCACGTCCATAA 59.238 45.455 0.00 0.00 40.78 1.90
120 121 2.380941 TCCTTCCGAATCACGTCCATA 58.619 47.619 0.00 0.00 40.78 2.74
121 122 1.191535 TCCTTCCGAATCACGTCCAT 58.808 50.000 0.00 0.00 40.78 3.41
122 123 0.970640 TTCCTTCCGAATCACGTCCA 59.029 50.000 0.00 0.00 40.78 4.02
123 124 1.730612 GTTTCCTTCCGAATCACGTCC 59.269 52.381 0.00 0.00 40.78 4.79
124 125 2.409975 TGTTTCCTTCCGAATCACGTC 58.590 47.619 0.00 0.00 40.78 4.34
125 126 2.536761 TGTTTCCTTCCGAATCACGT 57.463 45.000 0.00 0.00 40.78 4.49
126 127 3.551551 GTTTGTTTCCTTCCGAATCACG 58.448 45.455 0.00 0.00 42.18 4.35
127 128 3.568430 AGGTTTGTTTCCTTCCGAATCAC 59.432 43.478 0.00 0.00 31.36 3.06
128 129 3.827722 AGGTTTGTTTCCTTCCGAATCA 58.172 40.909 0.00 0.00 30.18 2.57
129 130 4.848562 AAGGTTTGTTTCCTTCCGAATC 57.151 40.909 0.00 0.00 40.80 2.52
130 131 6.007703 TCATAAGGTTTGTTTCCTTCCGAAT 58.992 36.000 0.29 0.00 43.26 3.34
131 132 5.378332 TCATAAGGTTTGTTTCCTTCCGAA 58.622 37.500 0.29 0.00 43.26 4.30
132 133 4.975631 TCATAAGGTTTGTTTCCTTCCGA 58.024 39.130 0.29 0.00 43.26 4.55
133 134 5.472137 TCTTCATAAGGTTTGTTTCCTTCCG 59.528 40.000 0.29 0.00 43.26 4.30
134 135 6.894339 TCTTCATAAGGTTTGTTTCCTTCC 57.106 37.500 0.29 0.00 43.26 3.46
174 175 9.895138 TCAATCACAATCAATCTCTAAAGATCA 57.105 29.630 0.00 0.00 41.54 2.92
213 214 9.988350 CTGACGCAAATTATTTAGTAATGTCTT 57.012 29.630 0.00 0.00 33.32 3.01
214 215 9.162764 ACTGACGCAAATTATTTAGTAATGTCT 57.837 29.630 0.00 0.00 33.32 3.41
219 220 9.602568 TCCATACTGACGCAAATTATTTAGTAA 57.397 29.630 2.62 0.00 0.00 2.24
220 221 9.602568 TTCCATACTGACGCAAATTATTTAGTA 57.397 29.630 0.00 0.00 0.00 1.82
221 222 8.500753 TTCCATACTGACGCAAATTATTTAGT 57.499 30.769 0.00 0.00 0.00 2.24
222 223 9.438291 CTTTCCATACTGACGCAAATTATTTAG 57.562 33.333 0.00 0.00 0.00 1.85
223 224 8.952278 ACTTTCCATACTGACGCAAATTATTTA 58.048 29.630 0.00 0.00 0.00 1.40
224 225 7.826690 ACTTTCCATACTGACGCAAATTATTT 58.173 30.769 0.00 0.00 0.00 1.40
225 226 7.391148 ACTTTCCATACTGACGCAAATTATT 57.609 32.000 0.00 0.00 0.00 1.40
226 227 7.336931 AGAACTTTCCATACTGACGCAAATTAT 59.663 33.333 0.00 0.00 0.00 1.28
227 228 6.653320 AGAACTTTCCATACTGACGCAAATTA 59.347 34.615 0.00 0.00 0.00 1.40
228 229 5.473504 AGAACTTTCCATACTGACGCAAATT 59.526 36.000 0.00 0.00 0.00 1.82
229 230 5.003804 AGAACTTTCCATACTGACGCAAAT 58.996 37.500 0.00 0.00 0.00 2.32
230 231 4.213270 CAGAACTTTCCATACTGACGCAAA 59.787 41.667 0.00 0.00 0.00 3.68
231 232 3.745975 CAGAACTTTCCATACTGACGCAA 59.254 43.478 0.00 0.00 0.00 4.85
232 233 3.006430 TCAGAACTTTCCATACTGACGCA 59.994 43.478 0.00 0.00 33.57 5.24
233 234 3.585862 TCAGAACTTTCCATACTGACGC 58.414 45.455 0.00 0.00 33.57 5.19
234 235 4.806247 GGATCAGAACTTTCCATACTGACG 59.194 45.833 0.00 0.00 39.76 4.35
235 236 4.806247 CGGATCAGAACTTTCCATACTGAC 59.194 45.833 0.00 0.00 39.76 3.51
236 237 4.466370 ACGGATCAGAACTTTCCATACTGA 59.534 41.667 0.00 0.00 40.88 3.41
237 238 4.759782 ACGGATCAGAACTTTCCATACTG 58.240 43.478 0.00 0.00 0.00 2.74
238 239 5.422214 AACGGATCAGAACTTTCCATACT 57.578 39.130 0.00 0.00 0.00 2.12
239 240 6.817140 ACTAAACGGATCAGAACTTTCCATAC 59.183 38.462 0.00 0.00 0.00 2.39
240 241 6.942976 ACTAAACGGATCAGAACTTTCCATA 58.057 36.000 0.00 0.00 0.00 2.74
241 242 5.805728 ACTAAACGGATCAGAACTTTCCAT 58.194 37.500 0.00 0.00 0.00 3.41
242 243 5.223449 ACTAAACGGATCAGAACTTTCCA 57.777 39.130 0.00 0.00 0.00 3.53
243 244 6.555812 AAACTAAACGGATCAGAACTTTCC 57.444 37.500 0.00 0.00 0.00 3.13
266 267 4.963373 TCACCCTCTCATACAACGAAAAA 58.037 39.130 0.00 0.00 0.00 1.94
267 268 4.610605 TCACCCTCTCATACAACGAAAA 57.389 40.909 0.00 0.00 0.00 2.29
268 269 4.039973 ACTTCACCCTCTCATACAACGAAA 59.960 41.667 0.00 0.00 0.00 3.46
269 270 3.576982 ACTTCACCCTCTCATACAACGAA 59.423 43.478 0.00 0.00 0.00 3.85
270 271 3.056821 CACTTCACCCTCTCATACAACGA 60.057 47.826 0.00 0.00 0.00 3.85
271 272 3.056821 TCACTTCACCCTCTCATACAACG 60.057 47.826 0.00 0.00 0.00 4.10
272 273 4.537135 TCACTTCACCCTCTCATACAAC 57.463 45.455 0.00 0.00 0.00 3.32
273 274 5.560722 TTTCACTTCACCCTCTCATACAA 57.439 39.130 0.00 0.00 0.00 2.41
274 275 5.560722 TTTTCACTTCACCCTCTCATACA 57.439 39.130 0.00 0.00 0.00 2.29
275 276 8.451748 GTTTATTTTCACTTCACCCTCTCATAC 58.548 37.037 0.00 0.00 0.00 2.39
276 277 7.610305 GGTTTATTTTCACTTCACCCTCTCATA 59.390 37.037 0.00 0.00 0.00 2.15
277 278 6.434340 GGTTTATTTTCACTTCACCCTCTCAT 59.566 38.462 0.00 0.00 0.00 2.90
278 279 5.768164 GGTTTATTTTCACTTCACCCTCTCA 59.232 40.000 0.00 0.00 0.00 3.27
279 280 5.106673 CGGTTTATTTTCACTTCACCCTCTC 60.107 44.000 0.00 0.00 0.00 3.20
280 281 4.760204 CGGTTTATTTTCACTTCACCCTCT 59.240 41.667 0.00 0.00 0.00 3.69
281 282 4.758165 TCGGTTTATTTTCACTTCACCCTC 59.242 41.667 0.00 0.00 0.00 4.30
282 283 4.721132 TCGGTTTATTTTCACTTCACCCT 58.279 39.130 0.00 0.00 0.00 4.34
283 284 5.638596 ATCGGTTTATTTTCACTTCACCC 57.361 39.130 0.00 0.00 0.00 4.61
284 285 8.294577 ACTTTATCGGTTTATTTTCACTTCACC 58.705 33.333 0.00 0.00 0.00 4.02
285 286 9.113876 CACTTTATCGGTTTATTTTCACTTCAC 57.886 33.333 0.00 0.00 0.00 3.18
286 287 8.293867 CCACTTTATCGGTTTATTTTCACTTCA 58.706 33.333 0.00 0.00 0.00 3.02
287 288 7.753580 CCCACTTTATCGGTTTATTTTCACTTC 59.246 37.037 0.00 0.00 0.00 3.01
288 289 7.449086 TCCCACTTTATCGGTTTATTTTCACTT 59.551 33.333 0.00 0.00 0.00 3.16
289 290 6.943718 TCCCACTTTATCGGTTTATTTTCACT 59.056 34.615 0.00 0.00 0.00 3.41
290 291 7.120138 TCTCCCACTTTATCGGTTTATTTTCAC 59.880 37.037 0.00 0.00 0.00 3.18
291 292 7.169591 TCTCCCACTTTATCGGTTTATTTTCA 58.830 34.615 0.00 0.00 0.00 2.69
292 293 7.201705 CCTCTCCCACTTTATCGGTTTATTTTC 60.202 40.741 0.00 0.00 0.00 2.29
293 294 6.602009 CCTCTCCCACTTTATCGGTTTATTTT 59.398 38.462 0.00 0.00 0.00 1.82
294 295 6.120220 CCTCTCCCACTTTATCGGTTTATTT 58.880 40.000 0.00 0.00 0.00 1.40
295 296 5.681639 CCTCTCCCACTTTATCGGTTTATT 58.318 41.667 0.00 0.00 0.00 1.40
296 297 4.444449 GCCTCTCCCACTTTATCGGTTTAT 60.444 45.833 0.00 0.00 0.00 1.40
297 298 3.118519 GCCTCTCCCACTTTATCGGTTTA 60.119 47.826 0.00 0.00 0.00 2.01
298 299 2.355818 GCCTCTCCCACTTTATCGGTTT 60.356 50.000 0.00 0.00 0.00 3.27
299 300 1.209747 GCCTCTCCCACTTTATCGGTT 59.790 52.381 0.00 0.00 0.00 4.44
300 301 0.831307 GCCTCTCCCACTTTATCGGT 59.169 55.000 0.00 0.00 0.00 4.69
301 302 0.249489 CGCCTCTCCCACTTTATCGG 60.249 60.000 0.00 0.00 0.00 4.18
302 303 0.744874 TCGCCTCTCCCACTTTATCG 59.255 55.000 0.00 0.00 0.00 2.92
303 304 1.536284 CGTCGCCTCTCCCACTTTATC 60.536 57.143 0.00 0.00 0.00 1.75
304 305 0.460311 CGTCGCCTCTCCCACTTTAT 59.540 55.000 0.00 0.00 0.00 1.40
305 306 0.609957 TCGTCGCCTCTCCCACTTTA 60.610 55.000 0.00 0.00 0.00 1.85
306 307 1.469335 TTCGTCGCCTCTCCCACTTT 61.469 55.000 0.00 0.00 0.00 2.66
307 308 1.469335 TTTCGTCGCCTCTCCCACTT 61.469 55.000 0.00 0.00 0.00 3.16
308 309 1.469335 TTTTCGTCGCCTCTCCCACT 61.469 55.000 0.00 0.00 0.00 4.00
309 310 0.601841 TTTTTCGTCGCCTCTCCCAC 60.602 55.000 0.00 0.00 0.00 4.61
310 311 1.749665 TTTTTCGTCGCCTCTCCCA 59.250 52.632 0.00 0.00 0.00 4.37
311 312 4.687464 TTTTTCGTCGCCTCTCCC 57.313 55.556 0.00 0.00 0.00 4.30
326 327 6.928492 TCGTAGGTTAACCGTTGTAGATTTTT 59.072 34.615 18.91 0.00 42.08 1.94
327 328 6.454795 TCGTAGGTTAACCGTTGTAGATTTT 58.545 36.000 18.91 0.00 42.08 1.82
328 329 6.024552 TCGTAGGTTAACCGTTGTAGATTT 57.975 37.500 18.91 0.02 42.08 2.17
329 330 5.643379 TCGTAGGTTAACCGTTGTAGATT 57.357 39.130 18.91 0.77 42.08 2.40
330 331 5.643379 TTCGTAGGTTAACCGTTGTAGAT 57.357 39.130 18.91 1.51 42.08 1.98
331 332 5.446143 TTTCGTAGGTTAACCGTTGTAGA 57.554 39.130 18.91 10.76 42.08 2.59
332 333 6.523676 TTTTTCGTAGGTTAACCGTTGTAG 57.476 37.500 18.91 8.74 42.08 2.74
352 353 2.093890 ACCACTTTCGTTCGGGTTTTT 58.906 42.857 0.00 0.00 0.00 1.94
353 354 1.402613 CACCACTTTCGTTCGGGTTTT 59.597 47.619 0.00 0.00 0.00 2.43
354 355 1.018910 CACCACTTTCGTTCGGGTTT 58.981 50.000 0.00 0.00 0.00 3.27
355 356 0.816421 CCACCACTTTCGTTCGGGTT 60.816 55.000 0.00 0.00 0.00 4.11
356 357 1.227734 CCACCACTTTCGTTCGGGT 60.228 57.895 0.00 0.00 0.00 5.28
357 358 1.964373 CCCACCACTTTCGTTCGGG 60.964 63.158 0.00 0.00 0.00 5.14
358 359 1.070105 TCCCACCACTTTCGTTCGG 59.930 57.895 0.00 0.00 0.00 4.30
359 360 1.554042 CGTCCCACCACTTTCGTTCG 61.554 60.000 0.00 0.00 0.00 3.95
360 361 0.249573 TCGTCCCACCACTTTCGTTC 60.250 55.000 0.00 0.00 0.00 3.95
361 362 0.178533 TTCGTCCCACCACTTTCGTT 59.821 50.000 0.00 0.00 0.00 3.85
362 363 0.178533 TTTCGTCCCACCACTTTCGT 59.821 50.000 0.00 0.00 0.00 3.85
363 364 1.301423 TTTTCGTCCCACCACTTTCG 58.699 50.000 0.00 0.00 0.00 3.46
382 383 2.640316 AGTCTCGCTTCCAGGTTTTT 57.360 45.000 0.00 0.00 0.00 1.94
383 384 2.289506 GGTAGTCTCGCTTCCAGGTTTT 60.290 50.000 0.00 0.00 35.06 2.43
384 385 1.275573 GGTAGTCTCGCTTCCAGGTTT 59.724 52.381 0.00 0.00 35.06 3.27
385 386 0.896226 GGTAGTCTCGCTTCCAGGTT 59.104 55.000 0.00 0.00 35.06 3.50
386 387 0.251653 TGGTAGTCTCGCTTCCAGGT 60.252 55.000 0.00 0.00 39.34 4.00
387 388 0.895530 TTGGTAGTCTCGCTTCCAGG 59.104 55.000 0.00 0.00 43.94 4.45
388 389 1.546476 AGTTGGTAGTCTCGCTTCCAG 59.454 52.381 0.00 0.00 43.94 3.86
389 390 1.272490 CAGTTGGTAGTCTCGCTTCCA 59.728 52.381 0.00 0.00 41.97 3.53
390 391 1.272769 ACAGTTGGTAGTCTCGCTTCC 59.727 52.381 0.00 0.00 35.47 3.46
391 392 2.726832 ACAGTTGGTAGTCTCGCTTC 57.273 50.000 0.00 0.00 0.00 3.86
392 393 2.288886 GGAACAGTTGGTAGTCTCGCTT 60.289 50.000 0.00 0.00 0.00 4.68
393 394 1.272769 GGAACAGTTGGTAGTCTCGCT 59.727 52.381 0.00 0.00 0.00 4.93
394 395 1.000506 TGGAACAGTTGGTAGTCTCGC 59.999 52.381 0.00 0.00 0.00 5.03
403 404 7.310113 AGTCTCTACTTCTAATGGAACAGTTGG 60.310 40.741 0.00 0.00 34.45 3.77
404 405 7.607250 AGTCTCTACTTCTAATGGAACAGTTG 58.393 38.462 0.00 0.00 34.45 3.16
405 406 7.093684 GGAGTCTCTACTTCTAATGGAACAGTT 60.094 40.741 0.00 0.00 37.84 3.16
406 407 6.378848 GGAGTCTCTACTTCTAATGGAACAGT 59.621 42.308 0.00 0.00 37.84 3.55
407 408 6.183360 GGGAGTCTCTACTTCTAATGGAACAG 60.183 46.154 0.00 0.00 37.84 3.16
408 409 5.657302 GGGAGTCTCTACTTCTAATGGAACA 59.343 44.000 0.00 0.00 38.68 3.18
409 410 5.894964 AGGGAGTCTCTACTTCTAATGGAAC 59.105 44.000 0.00 0.00 35.56 3.62
410 411 6.093617 AGGGAGTCTCTACTTCTAATGGAA 57.906 41.667 0.00 0.00 35.56 3.53
411 412 5.399267 GGAGGGAGTCTCTACTTCTAATGGA 60.399 48.000 0.00 0.00 42.10 3.41
412 413 4.830600 GGAGGGAGTCTCTACTTCTAATGG 59.169 50.000 0.00 0.00 42.10 3.16
413 414 4.517453 CGGAGGGAGTCTCTACTTCTAATG 59.483 50.000 0.00 0.00 42.10 1.90
414 415 4.166531 ACGGAGGGAGTCTCTACTTCTAAT 59.833 45.833 0.00 0.00 42.10 1.73
415 416 3.522750 ACGGAGGGAGTCTCTACTTCTAA 59.477 47.826 0.00 0.00 42.10 2.10
416 417 3.113824 ACGGAGGGAGTCTCTACTTCTA 58.886 50.000 0.00 0.00 42.10 2.10
417 418 1.917568 ACGGAGGGAGTCTCTACTTCT 59.082 52.381 0.00 0.00 42.10 2.85
418 419 2.291365 GACGGAGGGAGTCTCTACTTC 58.709 57.143 0.00 0.00 42.10 3.01
419 420 1.064537 GGACGGAGGGAGTCTCTACTT 60.065 57.143 0.00 0.00 42.10 2.24
420 421 0.547553 GGACGGAGGGAGTCTCTACT 59.452 60.000 0.00 0.00 42.10 2.57
421 422 0.466007 GGGACGGAGGGAGTCTCTAC 60.466 65.000 0.00 0.00 42.10 2.59
422 423 0.917821 TGGGACGGAGGGAGTCTCTA 60.918 60.000 0.00 0.00 42.10 2.43
423 424 1.585651 ATGGGACGGAGGGAGTCTCT 61.586 60.000 0.00 0.00 42.10 3.10
424 425 0.185416 TATGGGACGGAGGGAGTCTC 59.815 60.000 0.00 0.00 39.45 3.36
425 426 0.635009 TTATGGGACGGAGGGAGTCT 59.365 55.000 0.00 0.00 38.58 3.24
426 427 1.344763 CATTATGGGACGGAGGGAGTC 59.655 57.143 0.00 0.00 37.86 3.36
427 428 1.344087 ACATTATGGGACGGAGGGAGT 60.344 52.381 0.00 0.00 0.00 3.85
428 429 1.424638 ACATTATGGGACGGAGGGAG 58.575 55.000 0.00 0.00 0.00 4.30
429 430 2.779429 TACATTATGGGACGGAGGGA 57.221 50.000 0.00 0.00 0.00 4.20
430 431 3.849563 TTTACATTATGGGACGGAGGG 57.150 47.619 0.00 0.00 0.00 4.30
431 432 3.558418 CGTTTTACATTATGGGACGGAGG 59.442 47.826 0.00 0.00 0.00 4.30
432 433 4.186159 ACGTTTTACATTATGGGACGGAG 58.814 43.478 13.17 0.00 33.74 4.63
433 434 4.205065 ACGTTTTACATTATGGGACGGA 57.795 40.909 13.17 0.00 33.74 4.69
434 435 4.950434 AACGTTTTACATTATGGGACGG 57.050 40.909 0.00 0.00 33.74 4.79
479 480 6.873076 TCCGTACCATAATGTAAGACGTTTTT 59.127 34.615 0.00 0.00 0.00 1.94
480 481 6.397272 TCCGTACCATAATGTAAGACGTTTT 58.603 36.000 0.00 0.00 0.00 2.43
481 482 5.964758 TCCGTACCATAATGTAAGACGTTT 58.035 37.500 0.00 0.00 0.00 3.60
482 483 5.450965 CCTCCGTACCATAATGTAAGACGTT 60.451 44.000 0.00 0.00 0.00 3.99
483 484 4.037208 CCTCCGTACCATAATGTAAGACGT 59.963 45.833 0.00 0.00 0.00 4.34
484 485 4.543692 CCTCCGTACCATAATGTAAGACG 58.456 47.826 0.00 0.00 0.00 4.18
485 486 4.586001 TCCCTCCGTACCATAATGTAAGAC 59.414 45.833 0.00 0.00 0.00 3.01
486 487 4.806892 TCCCTCCGTACCATAATGTAAGA 58.193 43.478 0.00 0.00 0.00 2.10
487 488 4.560919 GCTCCCTCCGTACCATAATGTAAG 60.561 50.000 0.00 0.00 0.00 2.34
488 489 3.322828 GCTCCCTCCGTACCATAATGTAA 59.677 47.826 0.00 0.00 0.00 2.41
489 490 2.895404 GCTCCCTCCGTACCATAATGTA 59.105 50.000 0.00 0.00 0.00 2.29
490 491 1.692519 GCTCCCTCCGTACCATAATGT 59.307 52.381 0.00 0.00 0.00 2.71
491 492 1.691976 TGCTCCCTCCGTACCATAATG 59.308 52.381 0.00 0.00 0.00 1.90
492 493 1.971357 CTGCTCCCTCCGTACCATAAT 59.029 52.381 0.00 0.00 0.00 1.28
493 494 1.410004 CTGCTCCCTCCGTACCATAA 58.590 55.000 0.00 0.00 0.00 1.90
494 495 1.113517 GCTGCTCCCTCCGTACCATA 61.114 60.000 0.00 0.00 0.00 2.74
495 496 2.435693 GCTGCTCCCTCCGTACCAT 61.436 63.158 0.00 0.00 0.00 3.55
496 497 3.075005 GCTGCTCCCTCCGTACCA 61.075 66.667 0.00 0.00 0.00 3.25
497 498 1.900545 AAAGCTGCTCCCTCCGTACC 61.901 60.000 1.00 0.00 0.00 3.34
498 499 0.822164 TAAAGCTGCTCCCTCCGTAC 59.178 55.000 1.00 0.00 0.00 3.67
499 500 1.480954 CTTAAAGCTGCTCCCTCCGTA 59.519 52.381 1.00 0.00 0.00 4.02
500 501 0.250513 CTTAAAGCTGCTCCCTCCGT 59.749 55.000 1.00 0.00 0.00 4.69
501 502 0.250513 ACTTAAAGCTGCTCCCTCCG 59.749 55.000 1.00 0.00 0.00 4.63
502 503 1.557371 AGACTTAAAGCTGCTCCCTCC 59.443 52.381 1.00 0.00 0.00 4.30
503 504 4.473477 TTAGACTTAAAGCTGCTCCCTC 57.527 45.455 1.00 0.00 0.00 4.30
504 505 4.910458 TTTAGACTTAAAGCTGCTCCCT 57.090 40.909 1.00 0.00 0.00 4.20
505 506 6.516739 AAATTTAGACTTAAAGCTGCTCCC 57.483 37.500 1.00 0.00 32.58 4.30
523 524 9.767228 AAGCCTTAACGGTGTTAAATAAAATTT 57.233 25.926 3.98 0.00 34.25 1.82
528 529 9.676195 GTTTTAAGCCTTAACGGTGTTAAATAA 57.324 29.630 0.00 0.50 35.28 1.40
529 530 8.014517 CGTTTTAAGCCTTAACGGTGTTAAATA 58.985 33.333 4.89 0.00 40.51 1.40
530 531 6.857451 CGTTTTAAGCCTTAACGGTGTTAAAT 59.143 34.615 4.89 0.00 40.51 1.40
531 532 6.197981 CGTTTTAAGCCTTAACGGTGTTAAA 58.802 36.000 4.89 0.00 40.51 1.52
532 533 5.746539 CGTTTTAAGCCTTAACGGTGTTAA 58.253 37.500 4.89 2.52 40.51 2.01
533 534 5.341407 CGTTTTAAGCCTTAACGGTGTTA 57.659 39.130 4.89 0.00 40.51 2.41
534 535 4.213596 CGTTTTAAGCCTTAACGGTGTT 57.786 40.909 4.89 0.00 40.51 3.32
535 536 3.883631 CGTTTTAAGCCTTAACGGTGT 57.116 42.857 4.89 0.00 40.51 4.16
539 540 2.159801 CCGTCCGTTTTAAGCCTTAACG 60.160 50.000 5.69 5.69 42.98 3.18
540 541 3.066380 TCCGTCCGTTTTAAGCCTTAAC 58.934 45.455 0.00 0.00 0.00 2.01
541 542 3.399440 TCCGTCCGTTTTAAGCCTTAA 57.601 42.857 0.00 0.00 0.00 1.85
542 543 3.244181 ACTTCCGTCCGTTTTAAGCCTTA 60.244 43.478 0.00 0.00 0.00 2.69
543 544 2.148768 CTTCCGTCCGTTTTAAGCCTT 58.851 47.619 0.00 0.00 0.00 4.35
544 545 1.071228 ACTTCCGTCCGTTTTAAGCCT 59.929 47.619 0.00 0.00 0.00 4.58
545 546 1.196127 CACTTCCGTCCGTTTTAAGCC 59.804 52.381 0.00 0.00 0.00 4.35
546 547 1.869132 ACACTTCCGTCCGTTTTAAGC 59.131 47.619 0.00 0.00 0.00 3.09
547 548 5.851047 ATAACACTTCCGTCCGTTTTAAG 57.149 39.130 0.00 0.00 0.00 1.85
548 549 7.721286 TTTATAACACTTCCGTCCGTTTTAA 57.279 32.000 0.00 0.00 0.00 1.52
549 550 7.623925 GCATTTATAACACTTCCGTCCGTTTTA 60.624 37.037 0.00 0.00 0.00 1.52
550 551 6.604930 CATTTATAACACTTCCGTCCGTTTT 58.395 36.000 0.00 0.00 0.00 2.43
551 552 5.391203 GCATTTATAACACTTCCGTCCGTTT 60.391 40.000 0.00 0.00 0.00 3.60
552 553 4.093850 GCATTTATAACACTTCCGTCCGTT 59.906 41.667 0.00 0.00 0.00 4.44
553 554 3.619929 GCATTTATAACACTTCCGTCCGT 59.380 43.478 0.00 0.00 0.00 4.69
554 555 3.619483 TGCATTTATAACACTTCCGTCCG 59.381 43.478 0.00 0.00 0.00 4.79
555 556 5.751243 ATGCATTTATAACACTTCCGTCC 57.249 39.130 0.00 0.00 0.00 4.79
556 557 9.730420 ATTTTATGCATTTATAACACTTCCGTC 57.270 29.630 3.54 0.00 0.00 4.79
568 569 9.195411 CACGCCATCTAAATTTTATGCATTTAT 57.805 29.630 3.54 0.00 0.00 1.40
569 570 7.168972 GCACGCCATCTAAATTTTATGCATTTA 59.831 33.333 3.54 0.00 0.00 1.40
570 571 6.018832 GCACGCCATCTAAATTTTATGCATTT 60.019 34.615 3.54 0.00 0.00 2.32
571 572 5.463061 GCACGCCATCTAAATTTTATGCATT 59.537 36.000 3.54 0.00 0.00 3.56
572 573 4.984161 GCACGCCATCTAAATTTTATGCAT 59.016 37.500 3.79 3.79 0.00 3.96
573 574 4.142293 TGCACGCCATCTAAATTTTATGCA 60.142 37.500 0.00 7.07 37.03 3.96
574 575 4.358851 TGCACGCCATCTAAATTTTATGC 58.641 39.130 0.00 3.01 0.00 3.14
575 576 6.074195 CCAATGCACGCCATCTAAATTTTATG 60.074 38.462 0.00 1.24 31.43 1.90
576 577 5.984926 CCAATGCACGCCATCTAAATTTTAT 59.015 36.000 0.00 0.00 31.43 1.40
577 578 5.126222 TCCAATGCACGCCATCTAAATTTTA 59.874 36.000 0.00 0.00 31.43 1.52
578 579 4.081752 TCCAATGCACGCCATCTAAATTTT 60.082 37.500 0.00 0.00 31.43 1.82
579 580 3.446873 TCCAATGCACGCCATCTAAATTT 59.553 39.130 0.00 0.00 31.43 1.82
580 581 3.023119 TCCAATGCACGCCATCTAAATT 58.977 40.909 0.00 0.00 31.43 1.82
581 582 2.358898 GTCCAATGCACGCCATCTAAAT 59.641 45.455 0.00 0.00 31.43 1.40
582 583 1.742831 GTCCAATGCACGCCATCTAAA 59.257 47.619 0.00 0.00 31.43 1.85
583 584 1.378531 GTCCAATGCACGCCATCTAA 58.621 50.000 0.00 0.00 31.43 2.10
584 585 0.463654 GGTCCAATGCACGCCATCTA 60.464 55.000 0.00 0.00 31.43 1.98
585 586 1.750399 GGTCCAATGCACGCCATCT 60.750 57.895 0.00 0.00 31.43 2.90
586 587 2.045708 TGGTCCAATGCACGCCATC 61.046 57.895 0.00 0.00 31.43 3.51
587 588 2.035469 TGGTCCAATGCACGCCAT 59.965 55.556 0.00 0.00 35.06 4.40
588 589 2.983030 GTGGTCCAATGCACGCCA 60.983 61.111 0.00 0.00 0.00 5.69
589 590 3.747976 GGTGGTCCAATGCACGCC 61.748 66.667 0.00 0.00 0.00 5.68
590 591 2.983030 TGGTGGTCCAATGCACGC 60.983 61.111 0.00 0.00 41.25 5.34
599 600 2.654863 CCTTGGTGATAATGGTGGTCC 58.345 52.381 0.00 0.00 0.00 4.46
600 601 2.024414 GCCTTGGTGATAATGGTGGTC 58.976 52.381 0.00 0.00 0.00 4.02
601 602 1.341976 GGCCTTGGTGATAATGGTGGT 60.342 52.381 0.00 0.00 0.00 4.16
602 603 1.341877 TGGCCTTGGTGATAATGGTGG 60.342 52.381 3.32 0.00 0.00 4.61
603 604 2.142356 TGGCCTTGGTGATAATGGTG 57.858 50.000 3.32 0.00 0.00 4.17
604 605 3.403228 AATGGCCTTGGTGATAATGGT 57.597 42.857 3.32 0.00 0.00 3.55
605 606 5.078949 TGATAATGGCCTTGGTGATAATGG 58.921 41.667 3.32 0.00 0.00 3.16
606 607 6.653526 TTGATAATGGCCTTGGTGATAATG 57.346 37.500 3.32 0.00 0.00 1.90
607 608 6.840705 AGTTTGATAATGGCCTTGGTGATAAT 59.159 34.615 3.32 0.00 0.00 1.28
608 609 6.194235 AGTTTGATAATGGCCTTGGTGATAA 58.806 36.000 3.32 0.00 0.00 1.75
609 610 5.765510 AGTTTGATAATGGCCTTGGTGATA 58.234 37.500 3.32 0.00 0.00 2.15
610 611 4.613437 AGTTTGATAATGGCCTTGGTGAT 58.387 39.130 3.32 0.00 0.00 3.06
641 642 3.181469 GGTTTGATGCCATCATGCAATCT 60.181 43.478 8.45 0.00 45.84 2.40
650 651 0.536724 GGGTTGGGTTTGATGCCATC 59.463 55.000 0.00 0.00 0.00 3.51
655 656 1.340889 CAGTGTGGGTTGGGTTTGATG 59.659 52.381 0.00 0.00 0.00 3.07
673 690 6.554334 TTTTCGAGGTTAGTTCAAATCCAG 57.446 37.500 0.00 0.00 0.00 3.86
711 728 0.390866 CAGAGCTCACGCACTGGAAT 60.391 55.000 17.77 0.00 46.77 3.01
712 729 1.005748 CAGAGCTCACGCACTGGAA 60.006 57.895 17.77 0.00 46.77 3.53
751 768 9.595357 CTTTCGGTTCTTTTTCTAATCTGTTAC 57.405 33.333 0.00 0.00 0.00 2.50
760 777 5.007332 GCAGTGTCTTTCGGTTCTTTTTCTA 59.993 40.000 0.00 0.00 0.00 2.10
762 779 4.035684 GCAGTGTCTTTCGGTTCTTTTTC 58.964 43.478 0.00 0.00 0.00 2.29
792 815 5.906772 ACTAGTATTTGGATTAGTGGGGG 57.093 43.478 0.00 0.00 0.00 5.40
813 839 8.974408 GCGGGGATTAATTTGTCAAATTTATAC 58.026 33.333 24.67 21.09 41.16 1.47
835 861 5.449304 GGATTAATTTGATTAACTCGCGGG 58.551 41.667 3.27 3.27 37.53 6.13
840 866 5.237779 TCGCGGGGATTAATTTGATTAACTC 59.762 40.000 6.13 0.00 37.53 3.01
841 867 5.008316 GTCGCGGGGATTAATTTGATTAACT 59.992 40.000 6.13 0.00 37.53 2.24
852 878 1.022451 GCTTGTGTCGCGGGGATTAA 61.022 55.000 6.13 0.00 0.00 1.40
854 880 2.746277 GCTTGTGTCGCGGGGATT 60.746 61.111 6.13 0.00 0.00 3.01
874 919 1.665679 CTCTCTCTGTCTCTGTCTCGC 59.334 57.143 0.00 0.00 0.00 5.03
1273 1339 1.550327 CTACCAGCTGAGACAGACCA 58.450 55.000 17.39 0.00 32.44 4.02
1295 1361 4.015084 ACAAGAAGATGCTCAATTCCAGG 58.985 43.478 0.00 0.00 0.00 4.45
1303 1369 1.001293 ACAGCGACAAGAAGATGCTCA 59.999 47.619 0.00 0.00 32.66 4.26
1366 1432 1.967535 CAGACGAGGTTGGAGAGCA 59.032 57.895 0.00 0.00 0.00 4.26
1377 1443 5.278071 CCCTAATCAACTAGTAGCAGACGAG 60.278 48.000 0.00 0.00 36.87 4.18
1388 1454 3.004419 TGCGTCGATCCCTAATCAACTAG 59.996 47.826 0.00 0.00 33.65 2.57
1496 1576 1.669999 GCTCCCGTCGGGTAGCTAAA 61.670 60.000 31.21 14.20 44.74 1.85
1504 1584 3.528370 CCAGTAGCTCCCGTCGGG 61.528 72.222 25.31 25.31 46.11 5.14
1518 1598 1.822613 CACAGCCAGCCATAGCCAG 60.823 63.158 0.00 0.00 41.25 4.85
1552 1633 8.251026 TGATACAATAGACACAGTAGGAACTTG 58.749 37.037 0.00 0.00 41.75 3.16
1554 1635 7.616150 ACTGATACAATAGACACAGTAGGAACT 59.384 37.037 0.00 0.00 46.37 3.01
1555 1636 7.702772 CACTGATACAATAGACACAGTAGGAAC 59.297 40.741 0.00 0.00 36.94 3.62
1557 1638 6.183360 GCACTGATACAATAGACACAGTAGGA 60.183 42.308 0.00 0.00 36.94 2.94
1561 1642 4.222810 TGGCACTGATACAATAGACACAGT 59.777 41.667 0.00 0.00 38.79 3.55
1562 1643 4.758688 TGGCACTGATACAATAGACACAG 58.241 43.478 0.00 0.00 0.00 3.66
1564 1645 5.178797 ACTTGGCACTGATACAATAGACAC 58.821 41.667 0.00 0.00 0.00 3.67
1565 1646 5.420725 ACTTGGCACTGATACAATAGACA 57.579 39.130 0.00 0.00 0.00 3.41
1566 1647 6.743575 AAACTTGGCACTGATACAATAGAC 57.256 37.500 0.00 0.00 0.00 2.59
1581 1678 3.990318 ACTGCAAGAACTAAACTTGGC 57.010 42.857 0.00 0.00 43.12 4.52
1607 1799 8.302438 GCATTTTCCCTAGATCCATTAATGAAG 58.698 37.037 17.23 1.19 0.00 3.02
1664 1856 2.024414 ACAAAGCAGAACAGAACACCC 58.976 47.619 0.00 0.00 0.00 4.61
1671 1863 1.856597 GCAGCAAACAAAGCAGAACAG 59.143 47.619 0.00 0.00 0.00 3.16
1676 1868 2.220133 GTCAATGCAGCAAACAAAGCAG 59.780 45.455 0.00 0.00 40.71 4.24
1677 1869 2.159071 AGTCAATGCAGCAAACAAAGCA 60.159 40.909 0.00 0.00 41.73 3.91
1678 1870 2.476821 AGTCAATGCAGCAAACAAAGC 58.523 42.857 0.00 0.00 0.00 3.51
1679 1871 5.260140 CAAAAGTCAATGCAGCAAACAAAG 58.740 37.500 0.00 0.00 0.00 2.77
1680 1872 4.437121 GCAAAAGTCAATGCAGCAAACAAA 60.437 37.500 0.00 0.00 42.12 2.83
1681 1873 3.063725 GCAAAAGTCAATGCAGCAAACAA 59.936 39.130 0.00 0.00 42.12 2.83
1702 1894 2.541383 GGCAAAAGCACACAAAATTGGC 60.541 45.455 0.00 0.00 36.43 4.52
1703 1895 2.681848 TGGCAAAAGCACACAAAATTGG 59.318 40.909 0.00 0.00 0.00 3.16
1705 1897 2.351111 CGTGGCAAAAGCACACAAAATT 59.649 40.909 0.00 0.00 34.91 1.82
1706 1898 1.932511 CGTGGCAAAAGCACACAAAAT 59.067 42.857 0.00 0.00 34.91 1.82
1707 1899 1.354040 CGTGGCAAAAGCACACAAAA 58.646 45.000 0.00 0.00 34.91 2.44
1711 1915 0.030101 TAAGCGTGGCAAAAGCACAC 59.970 50.000 12.28 0.00 35.46 3.82
1713 1917 1.003769 GCTAAGCGTGGCAAAAGCAC 61.004 55.000 2.55 0.00 35.46 4.40
1715 1919 4.153014 GCTAAGCGTGGCAAAAGC 57.847 55.556 2.55 0.00 0.00 3.51
1760 1965 1.834263 AGAAGGGTATCACTGTGGAGC 59.166 52.381 8.11 6.15 0.00 4.70
1865 2070 4.329392 CCACTTAATACCGAACCAAACCT 58.671 43.478 0.00 0.00 0.00 3.50
1939 2144 3.262405 TCCGCAGAATACCCTTTGTTACT 59.738 43.478 0.00 0.00 0.00 2.24
2006 2211 5.819901 AGAAGGATTTTAATCTTCGAGCCAG 59.180 40.000 2.77 0.00 35.73 4.85
2046 2251 5.469421 GGAAATGCTGAGAGATATCTGTTGG 59.531 44.000 10.74 4.48 0.00 3.77
2047 2252 5.469421 GGGAAATGCTGAGAGATATCTGTTG 59.531 44.000 10.74 4.84 0.00 3.33
2048 2253 5.455899 GGGGAAATGCTGAGAGATATCTGTT 60.456 44.000 10.74 0.00 0.00 3.16
2049 2254 4.041444 GGGGAAATGCTGAGAGATATCTGT 59.959 45.833 10.74 5.90 0.00 3.41
2050 2255 4.565236 GGGGGAAATGCTGAGAGATATCTG 60.565 50.000 10.74 0.00 0.00 2.90
2051 2256 3.586618 GGGGGAAATGCTGAGAGATATCT 59.413 47.826 4.47 4.47 0.00 1.98
2081 2286 1.302832 CTGGGGCAGAACGAAGCTT 60.303 57.895 0.00 0.00 32.44 3.74
2088 2293 2.027100 AGCTAACTAACTGGGGCAGAAC 60.027 50.000 0.00 0.00 35.18 3.01
2099 2305 7.980099 TGATACAAGAGGCTAAAGCTAACTAAC 59.020 37.037 1.39 0.00 41.70 2.34
2151 2357 1.701847 AGGGAGTTGTGAACTGAGCAT 59.298 47.619 0.00 0.00 43.03 3.79
2157 2363 1.807814 AGGTGAGGGAGTTGTGAACT 58.192 50.000 0.00 0.00 46.38 3.01
2162 2385 2.945718 ACCAAGGTGAGGGAGTTGT 58.054 52.632 0.00 0.00 0.00 3.32
2237 2460 3.786635 TGCAAAATAACGTGCCAAAACT 58.213 36.364 0.00 0.00 40.14 2.66
2238 2461 4.522297 TTGCAAAATAACGTGCCAAAAC 57.478 36.364 0.00 0.00 40.14 2.43
2502 2725 8.348507 CAGAATTGCTTCCCATAAATCTCTTAC 58.651 37.037 0.00 0.00 31.27 2.34
2526 2749 3.370366 GTGAATAGCAGAACAGTGAGCAG 59.630 47.826 0.00 0.00 0.00 4.24
2531 2754 3.069289 TGCAGTGAATAGCAGAACAGTG 58.931 45.455 0.00 0.00 35.51 3.66
2532 2755 3.070018 GTGCAGTGAATAGCAGAACAGT 58.930 45.455 0.00 0.00 42.14 3.55
2571 2794 4.908601 TTTCAAAGAGCAGATCACCCTA 57.091 40.909 0.00 0.00 0.00 3.53
2648 2880 8.885494 AGTATAGTTTGATTTCAGAGAGCATC 57.115 34.615 0.00 0.00 0.00 3.91
2687 2919 6.072175 TCCCTAGTGCATAACAATTGAACAAC 60.072 38.462 13.59 2.86 0.00 3.32
2696 2928 6.537301 CGTAAAAGATCCCTAGTGCATAACAA 59.463 38.462 0.00 0.00 0.00 2.83
2705 2938 9.978044 GAATAACATACGTAAAAGATCCCTAGT 57.022 33.333 0.00 0.00 0.00 2.57
2806 3053 4.702131 GCACTTGAGGGAAACATACTTCAT 59.298 41.667 0.00 0.00 0.00 2.57
2874 3205 9.529823 ACAGGATCTGCAATAATCATGATTATT 57.470 29.630 33.57 33.57 42.19 1.40
2893 3232 9.549078 CCTTCTTTAAACTAGGATAACAGGATC 57.451 37.037 5.31 0.00 0.00 3.36
3022 3364 1.340600 CCTCCTGAGTTCGAGAGACCT 60.341 57.143 0.00 0.00 41.84 3.85
3290 3635 3.307242 GCACGATGATAAACCACTGAGAC 59.693 47.826 0.00 0.00 0.00 3.36
3291 3636 3.056179 TGCACGATGATAAACCACTGAGA 60.056 43.478 0.00 0.00 0.00 3.27
3378 3732 2.331194 ACAAGTATTTCCGAACGGACG 58.669 47.619 15.63 1.96 45.11 4.79
3379 3733 2.669924 GGACAAGTATTTCCGAACGGAC 59.330 50.000 15.63 5.16 45.11 4.79
3380 3734 2.564062 AGGACAAGTATTTCCGAACGGA 59.436 45.455 12.04 12.04 43.52 4.69
3381 3735 2.968675 AGGACAAGTATTTCCGAACGG 58.031 47.619 6.94 6.94 36.95 4.44
3382 3736 4.990257 TCTAGGACAAGTATTTCCGAACG 58.010 43.478 0.00 0.00 36.95 3.95
3383 3737 7.201617 CCATTTCTAGGACAAGTATTTCCGAAC 60.202 40.741 0.00 0.00 36.95 3.95
3384 3738 6.821665 CCATTTCTAGGACAAGTATTTCCGAA 59.178 38.462 0.00 0.00 36.95 4.30
3385 3739 6.070424 ACCATTTCTAGGACAAGTATTTCCGA 60.070 38.462 0.00 0.00 36.95 4.55
3386 3740 6.113411 ACCATTTCTAGGACAAGTATTTCCG 58.887 40.000 0.00 0.00 36.95 4.30
3387 3741 7.393515 ACAACCATTTCTAGGACAAGTATTTCC 59.606 37.037 0.00 0.00 0.00 3.13
3388 3742 8.336801 ACAACCATTTCTAGGACAAGTATTTC 57.663 34.615 0.00 0.00 0.00 2.17
3389 3743 9.975218 ATACAACCATTTCTAGGACAAGTATTT 57.025 29.630 0.00 0.00 0.00 1.40
3390 3744 9.614792 GATACAACCATTTCTAGGACAAGTATT 57.385 33.333 0.00 0.00 0.00 1.89
3391 3745 8.993424 AGATACAACCATTTCTAGGACAAGTAT 58.007 33.333 0.00 0.00 0.00 2.12
3392 3746 8.375493 AGATACAACCATTTCTAGGACAAGTA 57.625 34.615 0.00 0.00 0.00 2.24
3393 3747 7.259088 AGATACAACCATTTCTAGGACAAGT 57.741 36.000 0.00 0.00 0.00 3.16
3394 3748 8.696374 TCTAGATACAACCATTTCTAGGACAAG 58.304 37.037 6.10 0.00 38.67 3.16
3395 3749 8.603898 TCTAGATACAACCATTTCTAGGACAA 57.396 34.615 6.10 0.00 38.67 3.18
3396 3750 8.783660 ATCTAGATACAACCATTTCTAGGACA 57.216 34.615 2.53 0.00 38.67 4.02
3413 3767 9.877222 TGTCCTAGAAATGGTTGTATCTAGATA 57.123 33.333 8.44 8.44 42.48 1.98
3414 3768 8.783660 TGTCCTAGAAATGGTTGTATCTAGAT 57.216 34.615 10.73 10.73 42.48 1.98
3415 3769 8.603898 TTGTCCTAGAAATGGTTGTATCTAGA 57.396 34.615 9.60 0.00 42.48 2.43
3416 3770 8.478877 ACTTGTCCTAGAAATGGTTGTATCTAG 58.521 37.037 0.00 0.00 40.55 2.43
3417 3771 8.375493 ACTTGTCCTAGAAATGGTTGTATCTA 57.625 34.615 0.00 0.00 0.00 1.98
3418 3772 7.259088 ACTTGTCCTAGAAATGGTTGTATCT 57.741 36.000 0.00 0.00 0.00 1.98
3419 3773 9.614792 AATACTTGTCCTAGAAATGGTTGTATC 57.385 33.333 0.00 0.00 0.00 2.24
3420 3774 9.975218 AAATACTTGTCCTAGAAATGGTTGTAT 57.025 29.630 0.00 0.00 0.00 2.29
3421 3775 9.444600 GAAATACTTGTCCTAGAAATGGTTGTA 57.555 33.333 0.00 0.00 0.00 2.41
3422 3776 7.393515 GGAAATACTTGTCCTAGAAATGGTTGT 59.606 37.037 0.00 0.00 0.00 3.32
3423 3777 7.414098 CGGAAATACTTGTCCTAGAAATGGTTG 60.414 40.741 0.00 0.00 0.00 3.77
3424 3778 6.598064 CGGAAATACTTGTCCTAGAAATGGTT 59.402 38.462 0.00 0.00 0.00 3.67
3425 3779 6.070424 TCGGAAATACTTGTCCTAGAAATGGT 60.070 38.462 0.00 0.00 0.00 3.55
3426 3780 6.346096 TCGGAAATACTTGTCCTAGAAATGG 58.654 40.000 0.00 0.00 0.00 3.16
3427 3781 7.464178 CGTTCGGAAATACTTGTCCTAGAAATG 60.464 40.741 0.00 0.00 0.00 2.32
3428 3782 6.534079 CGTTCGGAAATACTTGTCCTAGAAAT 59.466 38.462 0.00 0.00 0.00 2.17
3429 3783 5.865552 CGTTCGGAAATACTTGTCCTAGAAA 59.134 40.000 0.00 0.00 0.00 2.52
3430 3784 5.404946 CGTTCGGAAATACTTGTCCTAGAA 58.595 41.667 0.00 0.00 0.00 2.10
3431 3785 4.142315 CCGTTCGGAAATACTTGTCCTAGA 60.142 45.833 5.19 0.00 0.00 2.43
3432 3786 4.110482 CCGTTCGGAAATACTTGTCCTAG 58.890 47.826 5.19 0.00 0.00 3.02
3433 3787 3.763360 TCCGTTCGGAAATACTTGTCCTA 59.237 43.478 11.66 0.00 0.00 2.94
3434 3788 2.564062 TCCGTTCGGAAATACTTGTCCT 59.436 45.455 11.66 0.00 0.00 3.85
3435 3789 2.928116 CTCCGTTCGGAAATACTTGTCC 59.072 50.000 14.79 0.00 33.41 4.02
3436 3790 2.928116 CCTCCGTTCGGAAATACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
3437 3791 2.354403 CCCTCCGTTCGGAAATACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
3438 3792 2.093869 TCCCTCCGTTCGGAAATACTTG 60.094 50.000 14.79 1.97 33.41 3.16
3439 3793 2.167900 CTCCCTCCGTTCGGAAATACTT 59.832 50.000 14.79 0.00 33.41 2.24
3440 3794 1.755380 CTCCCTCCGTTCGGAAATACT 59.245 52.381 14.79 0.00 33.41 2.12
3441 3795 1.479730 ACTCCCTCCGTTCGGAAATAC 59.520 52.381 14.79 0.00 33.41 1.89
3442 3796 1.856629 ACTCCCTCCGTTCGGAAATA 58.143 50.000 14.79 2.82 33.41 1.40
3443 3797 1.755380 CTACTCCCTCCGTTCGGAAAT 59.245 52.381 14.79 2.39 33.41 2.17
3444 3798 1.180029 CTACTCCCTCCGTTCGGAAA 58.820 55.000 14.79 3.49 33.41 3.13
3445 3799 0.038744 ACTACTCCCTCCGTTCGGAA 59.961 55.000 14.79 0.04 33.41 4.30
3446 3800 0.911769 TACTACTCCCTCCGTTCGGA 59.088 55.000 13.34 13.34 0.00 4.55
3447 3801 1.674962 CTTACTACTCCCTCCGTTCGG 59.325 57.143 4.74 4.74 0.00 4.30
3448 3802 1.065251 GCTTACTACTCCCTCCGTTCG 59.935 57.143 0.00 0.00 0.00 3.95
3449 3803 2.377073 AGCTTACTACTCCCTCCGTTC 58.623 52.381 0.00 0.00 0.00 3.95
3450 3804 2.496470 CAAGCTTACTACTCCCTCCGTT 59.504 50.000 0.00 0.00 0.00 4.44
3451 3805 2.100989 CAAGCTTACTACTCCCTCCGT 58.899 52.381 0.00 0.00 0.00 4.69
3452 3806 2.376109 TCAAGCTTACTACTCCCTCCG 58.624 52.381 0.00 0.00 0.00 4.63
3453 3807 3.429135 CGTTCAAGCTTACTACTCCCTCC 60.429 52.174 0.00 0.00 0.00 4.30
3454 3808 3.442977 TCGTTCAAGCTTACTACTCCCTC 59.557 47.826 0.00 0.00 0.00 4.30
3455 3809 3.428532 TCGTTCAAGCTTACTACTCCCT 58.571 45.455 0.00 0.00 0.00 4.20
3456 3810 3.863142 TCGTTCAAGCTTACTACTCCC 57.137 47.619 0.00 0.00 0.00 4.30
3457 3811 5.408356 TCAATCGTTCAAGCTTACTACTCC 58.592 41.667 0.00 0.00 0.00 3.85
3458 3812 6.586844 ACTTCAATCGTTCAAGCTTACTACTC 59.413 38.462 0.00 0.00 0.00 2.59
3459 3813 6.456501 ACTTCAATCGTTCAAGCTTACTACT 58.543 36.000 0.00 0.00 0.00 2.57
3460 3814 6.586844 AGACTTCAATCGTTCAAGCTTACTAC 59.413 38.462 0.00 0.00 0.00 2.73
3461 3815 6.688578 AGACTTCAATCGTTCAAGCTTACTA 58.311 36.000 0.00 0.00 0.00 1.82
3462 3816 5.542779 AGACTTCAATCGTTCAAGCTTACT 58.457 37.500 0.00 0.00 0.00 2.24
3568 3926 4.017126 ACCTAACTCTTTTAGGGCAATGC 58.983 43.478 13.40 0.00 44.47 3.56
3609 3967 8.697507 ATCTGACCTTTAATTCAACTTCAGTT 57.302 30.769 0.00 0.00 39.12 3.16
3660 4020 9.561069 AACAATAAAGGACCATAGCTATACTTG 57.439 33.333 5.77 0.00 0.00 3.16
3696 4140 4.782019 TGCCCAACATGACAATAAGAAC 57.218 40.909 0.00 0.00 0.00 3.01
3728 4176 6.110033 TGCTCAAAGTGTACACAAGTTTAGA 58.890 36.000 27.06 15.78 0.00 2.10
3733 4181 4.882671 CTTGCTCAAAGTGTACACAAGT 57.117 40.909 27.06 9.70 0.00 3.16
3807 4263 7.168219 AGATTGATGCTGTCCACTAAAGTAAA 58.832 34.615 0.00 0.00 0.00 2.01
3914 4372 0.547471 TGATCTGGGCCTCAGGTTCA 60.547 55.000 17.89 17.03 43.53 3.18
3962 4420 2.300433 TGCACATTCACCCAGATATGC 58.700 47.619 0.00 0.00 32.38 3.14
4366 4824 8.432805 ACTAATAACCCTCTTGGATTCACATAG 58.567 37.037 0.00 0.00 38.00 2.23
4631 5091 4.441356 GGGTTGAACATTTTGAAGCAGTCA 60.441 41.667 0.00 0.00 0.00 3.41
4702 5162 2.766345 TGTGCATGACTAGATGTGCA 57.234 45.000 13.74 13.74 44.50 4.57
4703 5163 4.375272 ACTATGTGCATGACTAGATGTGC 58.625 43.478 0.00 3.91 38.05 4.57
4704 5164 6.915544 AAACTATGTGCATGACTAGATGTG 57.084 37.500 0.00 0.00 0.00 3.21
4705 5165 7.928307 AAAAACTATGTGCATGACTAGATGT 57.072 32.000 0.00 0.00 0.00 3.06
4985 5445 8.812972 AGGAATGTCGATAGCATAAATAACCTA 58.187 33.333 0.00 0.00 33.57 3.08
5086 5546 2.843701 AGCCTAGCTCCAATTGATTCG 58.156 47.619 7.12 0.00 30.62 3.34
5092 5552 3.749226 GCTGAATAGCCTAGCTCCAATT 58.251 45.455 0.00 0.00 44.33 2.32
5219 5679 1.532604 TTGTCATCTCCTGTCGCCGT 61.533 55.000 0.00 0.00 0.00 5.68
5272 5732 7.953158 TGAAATACATCTAGCATCTAAGCAC 57.047 36.000 0.00 0.00 36.85 4.40
5293 5753 6.687604 TCGTCATAAACAGATCACTCTTGAA 58.312 36.000 0.00 0.00 34.61 2.69
5344 5810 4.893424 TCATCACGACGAACAGATATCA 57.107 40.909 0.00 0.00 0.00 2.15
5443 5910 5.399596 CAGTCATATCACAATAAGTCGACGG 59.600 44.000 10.46 1.44 0.00 4.79
5532 5999 5.766222 ACATTTCAGTGAAGAAACTCATGC 58.234 37.500 5.56 0.00 40.03 4.06
5533 6000 7.420002 TCAACATTTCAGTGAAGAAACTCATG 58.580 34.615 5.56 7.65 40.03 3.07
5628 6095 7.470289 ACAAAACTATTCTCATACGATCAGC 57.530 36.000 0.00 0.00 0.00 4.26
5799 6268 7.907214 TCATACTTCTTCTCCTTTACTTTGC 57.093 36.000 0.00 0.00 0.00 3.68
5820 6289 7.500141 TGTATGTGTGCAGTATATGAGTTCAT 58.500 34.615 0.00 0.00 40.22 2.57
5834 6303 4.450976 AGTTCAGACTTTGTATGTGTGCA 58.549 39.130 0.00 0.00 29.87 4.57
5848 6317 5.458779 CGGGTTGAAATGAAAAAGTTCAGAC 59.541 40.000 0.00 0.00 46.75 3.51
5849 6318 5.358442 TCGGGTTGAAATGAAAAAGTTCAGA 59.642 36.000 0.00 0.00 46.75 3.27
5850 6319 5.587289 TCGGGTTGAAATGAAAAAGTTCAG 58.413 37.500 0.00 0.00 46.75 3.02
5852 6321 7.328493 CCTTATCGGGTTGAAATGAAAAAGTTC 59.672 37.037 0.00 0.00 33.41 3.01
5853 6322 7.151976 CCTTATCGGGTTGAAATGAAAAAGTT 58.848 34.615 0.00 0.00 0.00 2.66
5895 6364 3.485463 TCGGCGAGAAATGGGAAATAT 57.515 42.857 4.99 0.00 0.00 1.28
5901 6370 0.391130 TCACTTCGGCGAGAAATGGG 60.391 55.000 10.46 0.80 36.78 4.00
5914 6383 1.019278 TTCCGCTTCGCCATCACTTC 61.019 55.000 0.00 0.00 0.00 3.01
5917 6386 0.459585 TACTTCCGCTTCGCCATCAC 60.460 55.000 0.00 0.00 0.00 3.06
5941 6410 6.017605 AGTGTGCAGTTCTTTCAAAGATAGTG 60.018 38.462 0.00 6.71 37.38 2.74
6044 6513 2.281070 CTGCTGCTGTCCACCGTT 60.281 61.111 0.00 0.00 0.00 4.44
6139 6608 6.611464 GCACGAATTGAATTTTGACTCGAAAC 60.611 38.462 2.19 0.00 0.00 2.78
6143 6612 4.218265 TGCACGAATTGAATTTTGACTCG 58.782 39.130 0.00 0.03 0.00 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.