Multiple sequence alignment - TraesCS6A01G058900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G058900 chr6A 100.000 3466 0 0 466 3931 31159352 31162817 0.000000e+00 6401.0
1 TraesCS6A01G058900 chr6A 81.937 1766 232 46 969 2701 31044070 31045781 0.000000e+00 1413.0
2 TraesCS6A01G058900 chr6A 96.651 418 13 1 3514 3931 28453837 28453421 0.000000e+00 693.0
3 TraesCS6A01G058900 chr6A 82.574 746 83 36 3100 3811 31114774 31115506 7.220000e-172 614.0
4 TraesCS6A01G058900 chr6A 83.896 652 79 17 1630 2270 31108209 31108845 2.020000e-167 599.0
5 TraesCS6A01G058900 chr6A 83.057 543 62 15 2591 3118 31109139 31109666 2.140000e-127 466.0
6 TraesCS6A01G058900 chr6A 100.000 188 0 0 1 188 31158887 31159074 8.080000e-92 348.0
7 TraesCS6A01G058900 chr6A 79.132 484 88 12 1042 1516 30422643 30423122 4.900000e-84 322.0
8 TraesCS6A01G058900 chr6A 72.565 616 128 29 1326 1928 30263655 30263068 3.140000e-36 163.0
9 TraesCS6A01G058900 chr6A 98.182 55 1 0 2856 2910 33185897 33185843 3.230000e-16 97.1
10 TraesCS6A01G058900 chr6D 92.803 2904 142 27 753 3636 27127167 27124311 0.000000e+00 4143.0
11 TraesCS6A01G058900 chr6D 92.243 2256 109 23 974 3199 27209702 27207483 0.000000e+00 3136.0
12 TraesCS6A01G058900 chr6D 83.558 1709 220 36 1010 2701 27329088 27327424 0.000000e+00 1543.0
13 TraesCS6A01G058900 chr6D 82.558 1376 174 37 984 2337 27313840 27312509 0.000000e+00 1151.0
14 TraesCS6A01G058900 chr6D 89.956 458 30 10 3193 3636 27207289 27206834 9.470000e-161 577.0
15 TraesCS6A01G058900 chr6D 81.667 720 86 35 3124 3814 27309722 27309020 1.230000e-154 556.0
16 TraesCS6A01G058900 chr6D 93.266 297 17 3 3635 3931 27206803 27206510 6.030000e-118 435.0
17 TraesCS6A01G058900 chr6D 92.929 297 13 4 3635 3929 27124280 27123990 3.630000e-115 425.0
18 TraesCS6A01G058900 chr6D 90.847 295 18 6 466 755 472461619 472461329 1.710000e-103 387.0
19 TraesCS6A01G058900 chr6D 79.202 476 86 9 1047 1516 27711128 27711596 6.340000e-83 318.0
20 TraesCS6A01G058900 chr6D 79.808 208 20 16 753 959 27210447 27210261 8.860000e-27 132.0
21 TraesCS6A01G058900 chr6D 95.161 62 3 0 2850 2911 29222285 29222346 8.990000e-17 99.0
22 TraesCS6A01G058900 chr6B 88.884 2186 176 31 1160 3321 49701288 49699146 0.000000e+00 2628.0
23 TraesCS6A01G058900 chr6B 88.500 600 36 13 3360 3929 49699148 49698552 0.000000e+00 695.0
24 TraesCS6A01G058900 chr6B 73.286 569 122 25 1052 1604 51423437 51422883 8.680000e-42 182.0
25 TraesCS6A01G058900 chr6B 93.548 62 4 0 2850 2911 78446296 78446235 4.180000e-15 93.5
26 TraesCS6A01G058900 chrUn 82.756 1386 188 26 976 2336 76831448 76832807 0.000000e+00 1188.0
27 TraesCS6A01G058900 chrUn 82.756 1386 188 26 976 2336 241635525 241636884 0.000000e+00 1188.0
28 TraesCS6A01G058900 chrUn 80.149 1073 167 27 1638 2701 76751324 76750289 0.000000e+00 760.0
29 TraesCS6A01G058900 chrUn 83.634 721 76 31 3124 3814 76833418 76834126 1.190000e-179 640.0
30 TraesCS6A01G058900 chrUn 83.634 721 76 31 3124 3814 241637495 241638203 1.190000e-179 640.0
31 TraesCS6A01G058900 chrUn 86.278 532 58 7 969 1485 76751849 76751318 7.370000e-157 564.0
32 TraesCS6A01G058900 chrUn 82.784 546 62 16 2591 3118 76832833 76833364 3.580000e-125 459.0
33 TraesCS6A01G058900 chrUn 82.784 546 62 16 2591 3118 241636910 241637441 3.580000e-125 459.0
34 TraesCS6A01G058900 chrUn 71.725 1252 271 60 1052 2269 27285167 27283965 1.390000e-69 274.0
35 TraesCS6A01G058900 chrUn 75.701 535 96 26 1003 1517 26970974 26970454 1.830000e-58 237.0
36 TraesCS6A01G058900 chrUn 71.677 632 140 28 1321 1930 137670335 137670949 5.300000e-29 139.0
37 TraesCS6A01G058900 chr7A 92.542 295 14 5 466 756 649832480 649832190 2.190000e-112 416.0
38 TraesCS6A01G058900 chr7A 90.476 189 16 2 1 188 477016162 477015975 8.430000e-62 248.0
39 TraesCS6A01G058900 chr5D 92.440 291 14 7 466 752 1729770 1730056 3.660000e-110 409.0
40 TraesCS6A01G058900 chr5D 91.534 189 15 1 1 188 41754123 41753935 3.900000e-65 259.0
41 TraesCS6A01G058900 chr5D 91.005 189 16 1 1 188 504511588 504511776 1.810000e-63 254.0
42 TraesCS6A01G058900 chr1B 92.734 289 12 6 466 751 52827853 52828135 3.660000e-110 409.0
43 TraesCS6A01G058900 chr7D 92.177 294 14 6 466 754 574770746 574771035 1.320000e-109 407.0
44 TraesCS6A01G058900 chr7D 90.374 187 17 1 3 188 32698107 32698293 1.090000e-60 244.0
45 TraesCS6A01G058900 chr3B 92.683 287 12 6 466 749 655347872 655347592 4.730000e-109 405.0
46 TraesCS6A01G058900 chr7B 91.781 292 13 8 466 754 312448235 312448518 2.850000e-106 396.0
47 TraesCS6A01G058900 chr3D 91.468 293 15 7 466 753 391608919 391609206 1.020000e-105 394.0
48 TraesCS6A01G058900 chr3D 91.111 45 4 0 1700 1744 549053164 549053120 1.180000e-05 62.1
49 TraesCS6A01G058900 chr3A 91.438 292 13 8 466 752 94161241 94161525 1.320000e-104 390.0
50 TraesCS6A01G058900 chr3A 91.053 190 15 2 1 188 17780904 17781093 5.040000e-64 255.0
51 TraesCS6A01G058900 chr4D 90.909 286 20 4 3354 3636 190481797 190481515 2.870000e-101 379.0
52 TraesCS6A01G058900 chr4D 91.005 189 16 1 1 188 507931983 507931795 1.810000e-63 254.0
53 TraesCS6A01G058900 chr4D 90.476 189 17 1 1 188 730414 730226 8.430000e-62 248.0
54 TraesCS6A01G058900 chr1A 87.629 291 27 8 3100 3387 363249454 363249738 2.930000e-86 329.0
55 TraesCS6A01G058900 chr1A 100.000 31 0 0 979 1009 80971903 80971933 1.530000e-04 58.4
56 TraesCS6A01G058900 chr2B 91.534 189 15 1 1 188 799553666 799553478 3.900000e-65 259.0
57 TraesCS6A01G058900 chr4B 90.576 191 13 4 1 188 613713615 613713427 8.430000e-62 248.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G058900 chr6A 31158887 31162817 3930 False 3374.500000 6401 100.00000 1 3931 2 chr6A.!!$F5 3930
1 TraesCS6A01G058900 chr6A 31044070 31045781 1711 False 1413.000000 1413 81.93700 969 2701 1 chr6A.!!$F2 1732
2 TraesCS6A01G058900 chr6A 31114774 31115506 732 False 614.000000 614 82.57400 3100 3811 1 chr6A.!!$F3 711
3 TraesCS6A01G058900 chr6A 31108209 31109666 1457 False 532.500000 599 83.47650 1630 3118 2 chr6A.!!$F4 1488
4 TraesCS6A01G058900 chr6D 27123990 27127167 3177 True 2284.000000 4143 92.86600 753 3929 2 chr6D.!!$R3 3176
5 TraesCS6A01G058900 chr6D 27327424 27329088 1664 True 1543.000000 1543 83.55800 1010 2701 1 chr6D.!!$R1 1691
6 TraesCS6A01G058900 chr6D 27206510 27210447 3937 True 1070.000000 3136 88.81825 753 3931 4 chr6D.!!$R4 3178
7 TraesCS6A01G058900 chr6D 27309020 27313840 4820 True 853.500000 1151 82.11250 984 3814 2 chr6D.!!$R5 2830
8 TraesCS6A01G058900 chr6B 49698552 49701288 2736 True 1661.500000 2628 88.69200 1160 3929 2 chr6B.!!$R3 2769
9 TraesCS6A01G058900 chrUn 76831448 76834126 2678 False 762.333333 1188 83.05800 976 3814 3 chrUn.!!$F2 2838
10 TraesCS6A01G058900 chrUn 241635525 241638203 2678 False 762.333333 1188 83.05800 976 3814 3 chrUn.!!$F3 2838
11 TraesCS6A01G058900 chrUn 76750289 76751849 1560 True 662.000000 760 83.21350 969 2701 2 chrUn.!!$R3 1732
12 TraesCS6A01G058900 chrUn 27283965 27285167 1202 True 274.000000 274 71.72500 1052 2269 1 chrUn.!!$R2 1217
13 TraesCS6A01G058900 chrUn 26970454 26970974 520 True 237.000000 237 75.70100 1003 1517 1 chrUn.!!$R1 514

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
491 492 0.033405 AGGACTAGCTAGTTCGGGCA 60.033 55.000 26.71 0.0 36.90 5.36 F
496 497 0.108329 TAGCTAGTTCGGGCAACAGC 60.108 55.000 0.00 0.0 38.45 4.40 F
576 577 0.108756 GGAGCGTGGTGGTACTTCTC 60.109 60.000 0.00 0.0 0.00 2.87 F
579 580 0.389948 GCGTGGTGGTACTTCTCTGG 60.390 60.000 0.00 0.0 0.00 3.86 F
680 681 0.461693 TTTGGGCTTGTTTGTGCTGC 60.462 50.000 0.00 0.0 0.00 5.25 F
700 701 0.811616 GGCCTCAGCACCTATCGTTG 60.812 60.000 0.00 0.0 42.56 4.10 F
702 703 0.824109 CCTCAGCACCTATCGTTGGA 59.176 55.000 0.00 0.0 0.00 3.53 F
718 719 0.908910 TGGATGTATCGGTGGTTGCT 59.091 50.000 0.00 0.0 0.00 3.91 F
2315 3154 1.069978 TCTGTTCGGATGCTTGTGTGA 59.930 47.619 0.00 0.0 0.00 3.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1548 2143 0.458669 TCTCCGACGAGTAAATGGCC 59.541 55.000 0.00 0.0 37.40 5.36 R
1932 2536 1.484653 ACCATCGCTGTGTGCCTTATA 59.515 47.619 0.00 0.0 38.78 0.98 R
2302 3125 1.818642 AAGCTCTCACACAAGCATCC 58.181 50.000 0.00 0.0 41.06 3.51 R
2375 3216 5.283457 AGGCATAAAGGACACTATCAGAC 57.717 43.478 0.00 0.0 0.00 3.51 R
2380 3221 8.052748 TGACATAAAAGGCATAAAGGACACTAT 58.947 33.333 0.00 0.0 0.00 2.12 R
2687 3539 6.924111 AGAATATTCCGATGCAGTTGTTTTT 58.076 32.000 11.92 0.0 0.00 1.94 R
2774 3627 9.480053 CAACTCACAAATGTAATCTGGAAAAAT 57.520 29.630 0.00 0.0 0.00 1.82 R
2800 3653 6.095440 AGGAGGCATCAACACAATATTTACAC 59.905 38.462 0.00 0.0 0.00 2.90 R
3122 6169 1.062581 AGAGCTGCTGAGGAAGGGATA 60.063 52.381 7.01 0.0 0.00 2.59 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.289525 CGGTGACCTCAGGGAGAC 58.710 66.667 0.00 0.00 36.25 3.36
18 19 2.701780 CGGTGACCTCAGGGAGACG 61.702 68.421 0.00 0.00 36.25 4.18
19 20 2.352032 GGTGACCTCAGGGAGACGG 61.352 68.421 0.00 0.00 36.25 4.79
20 21 2.680352 TGACCTCAGGGAGACGGC 60.680 66.667 0.00 0.00 36.25 5.68
21 22 3.827898 GACCTCAGGGAGACGGCG 61.828 72.222 4.80 4.80 36.25 6.46
22 23 4.361971 ACCTCAGGGAGACGGCGA 62.362 66.667 16.62 0.00 36.25 5.54
23 24 3.068691 CCTCAGGGAGACGGCGAA 61.069 66.667 16.62 0.00 33.58 4.70
24 25 2.492090 CTCAGGGAGACGGCGAAG 59.508 66.667 16.62 0.00 0.00 3.79
25 26 2.282958 TCAGGGAGACGGCGAAGT 60.283 61.111 16.62 0.00 0.00 3.01
26 27 1.878656 CTCAGGGAGACGGCGAAGTT 61.879 60.000 16.62 0.00 0.00 2.66
27 28 1.738099 CAGGGAGACGGCGAAGTTG 60.738 63.158 16.62 0.00 0.00 3.16
28 29 1.906824 AGGGAGACGGCGAAGTTGA 60.907 57.895 16.62 0.00 0.00 3.18
29 30 1.218316 GGGAGACGGCGAAGTTGAT 59.782 57.895 16.62 0.00 0.00 2.57
30 31 0.391263 GGGAGACGGCGAAGTTGATT 60.391 55.000 16.62 0.00 0.00 2.57
31 32 1.000145 GGAGACGGCGAAGTTGATTC 59.000 55.000 16.62 0.00 34.31 2.52
41 42 3.641439 GAAGTTGATTCGGTGATCGTG 57.359 47.619 0.00 0.00 40.32 4.35
42 43 2.010145 AGTTGATTCGGTGATCGTGG 57.990 50.000 0.00 0.00 40.32 4.94
43 44 1.275291 AGTTGATTCGGTGATCGTGGT 59.725 47.619 0.00 0.00 40.32 4.16
44 45 1.393539 GTTGATTCGGTGATCGTGGTG 59.606 52.381 0.00 0.00 40.32 4.17
45 46 0.108377 TGATTCGGTGATCGTGGTGG 60.108 55.000 0.00 0.00 40.32 4.61
46 47 1.429148 GATTCGGTGATCGTGGTGGC 61.429 60.000 0.00 0.00 40.32 5.01
47 48 2.178876 ATTCGGTGATCGTGGTGGCA 62.179 55.000 0.00 0.00 40.32 4.92
48 49 3.118454 CGGTGATCGTGGTGGCAC 61.118 66.667 9.70 9.70 0.00 5.01
49 50 2.031919 GGTGATCGTGGTGGCACA 59.968 61.111 20.82 2.61 33.09 4.57
50 51 1.377202 GGTGATCGTGGTGGCACAT 60.377 57.895 20.82 3.65 44.52 3.21
51 52 1.647545 GGTGATCGTGGTGGCACATG 61.648 60.000 20.82 10.97 44.52 3.21
52 53 0.955428 GTGATCGTGGTGGCACATGT 60.955 55.000 20.82 0.00 44.52 3.21
53 54 0.250684 TGATCGTGGTGGCACATGTT 60.251 50.000 20.82 6.30 44.52 2.71
54 55 0.168788 GATCGTGGTGGCACATGTTG 59.831 55.000 20.82 4.17 44.52 3.33
55 56 1.243342 ATCGTGGTGGCACATGTTGG 61.243 55.000 20.82 2.13 44.52 3.77
56 57 2.192861 CGTGGTGGCACATGTTGGT 61.193 57.895 20.82 0.00 44.52 3.67
57 58 1.363443 GTGGTGGCACATGTTGGTG 59.637 57.895 20.82 0.00 44.52 4.17
58 59 1.831726 TGGTGGCACATGTTGGTGG 60.832 57.895 20.82 0.00 44.52 4.61
59 60 2.573083 GGTGGCACATGTTGGTGGG 61.573 63.158 20.82 0.00 44.52 4.61
60 61 1.832167 GTGGCACATGTTGGTGGGT 60.832 57.895 13.86 0.00 44.52 4.51
61 62 0.538516 GTGGCACATGTTGGTGGGTA 60.539 55.000 13.86 0.00 44.52 3.69
62 63 0.251121 TGGCACATGTTGGTGGGTAG 60.251 55.000 0.00 0.00 39.19 3.18
63 64 1.595093 GGCACATGTTGGTGGGTAGC 61.595 60.000 0.00 0.00 39.19 3.58
64 65 1.922135 GCACATGTTGGTGGGTAGCG 61.922 60.000 0.00 0.00 39.19 4.26
65 66 0.605319 CACATGTTGGTGGGTAGCGT 60.605 55.000 0.00 0.00 35.13 5.07
66 67 0.605319 ACATGTTGGTGGGTAGCGTG 60.605 55.000 0.00 0.00 0.00 5.34
67 68 0.321210 CATGTTGGTGGGTAGCGTGA 60.321 55.000 0.00 0.00 0.00 4.35
68 69 0.618458 ATGTTGGTGGGTAGCGTGAT 59.382 50.000 0.00 0.00 0.00 3.06
69 70 0.321210 TGTTGGTGGGTAGCGTGATG 60.321 55.000 0.00 0.00 0.00 3.07
70 71 1.024579 GTTGGTGGGTAGCGTGATGG 61.025 60.000 0.00 0.00 0.00 3.51
71 72 2.189521 GGTGGGTAGCGTGATGGG 59.810 66.667 0.00 0.00 0.00 4.00
72 73 2.513897 GTGGGTAGCGTGATGGGC 60.514 66.667 0.00 0.00 0.00 5.36
73 74 4.155733 TGGGTAGCGTGATGGGCG 62.156 66.667 0.00 0.00 35.00 6.13
74 75 3.845259 GGGTAGCGTGATGGGCGA 61.845 66.667 0.00 0.00 35.00 5.54
75 76 2.421739 GGTAGCGTGATGGGCGAT 59.578 61.111 0.00 0.00 35.00 4.58
76 77 1.956170 GGTAGCGTGATGGGCGATG 60.956 63.158 0.00 0.00 35.00 3.84
77 78 2.280119 TAGCGTGATGGGCGATGC 60.280 61.111 0.00 0.00 35.00 3.91
78 79 3.087666 TAGCGTGATGGGCGATGCA 62.088 57.895 0.00 0.00 35.00 3.96
79 80 4.241999 GCGTGATGGGCGATGCAC 62.242 66.667 0.00 0.00 0.00 4.57
80 81 2.512286 CGTGATGGGCGATGCACT 60.512 61.111 0.00 0.00 30.56 4.40
81 82 1.227234 CGTGATGGGCGATGCACTA 60.227 57.895 0.00 0.00 30.56 2.74
82 83 0.601046 CGTGATGGGCGATGCACTAT 60.601 55.000 0.00 0.00 30.56 2.12
83 84 0.870393 GTGATGGGCGATGCACTATG 59.130 55.000 0.00 0.00 30.56 2.23
84 85 0.758123 TGATGGGCGATGCACTATGA 59.242 50.000 0.00 0.00 30.56 2.15
85 86 1.348696 TGATGGGCGATGCACTATGAT 59.651 47.619 0.00 0.00 30.56 2.45
86 87 2.224597 TGATGGGCGATGCACTATGATT 60.225 45.455 0.00 0.00 30.56 2.57
87 88 1.882912 TGGGCGATGCACTATGATTC 58.117 50.000 0.00 0.00 30.56 2.52
88 89 0.792640 GGGCGATGCACTATGATTCG 59.207 55.000 0.00 0.00 0.00 3.34
89 90 1.502231 GGCGATGCACTATGATTCGT 58.498 50.000 5.61 0.00 32.65 3.85
90 91 1.457303 GGCGATGCACTATGATTCGTC 59.543 52.381 5.61 0.00 32.65 4.20
91 92 2.398498 GCGATGCACTATGATTCGTCT 58.602 47.619 5.61 0.00 32.65 4.18
92 93 2.154580 GCGATGCACTATGATTCGTCTG 59.845 50.000 5.61 0.00 32.65 3.51
93 94 2.728318 CGATGCACTATGATTCGTCTGG 59.272 50.000 0.00 0.00 0.00 3.86
94 95 2.602257 TGCACTATGATTCGTCTGGG 57.398 50.000 0.00 0.00 0.00 4.45
95 96 1.138859 TGCACTATGATTCGTCTGGGG 59.861 52.381 0.00 0.00 0.00 4.96
96 97 1.139058 GCACTATGATTCGTCTGGGGT 59.861 52.381 0.00 0.00 0.00 4.95
97 98 2.826428 CACTATGATTCGTCTGGGGTG 58.174 52.381 0.00 0.00 0.00 4.61
98 99 1.762957 ACTATGATTCGTCTGGGGTGG 59.237 52.381 0.00 0.00 0.00 4.61
99 100 1.762957 CTATGATTCGTCTGGGGTGGT 59.237 52.381 0.00 0.00 0.00 4.16
100 101 0.253044 ATGATTCGTCTGGGGTGGTG 59.747 55.000 0.00 0.00 0.00 4.17
101 102 1.745489 GATTCGTCTGGGGTGGTGC 60.745 63.158 0.00 0.00 0.00 5.01
102 103 2.185310 GATTCGTCTGGGGTGGTGCT 62.185 60.000 0.00 0.00 0.00 4.40
103 104 2.469465 ATTCGTCTGGGGTGGTGCTG 62.469 60.000 0.00 0.00 0.00 4.41
104 105 4.704833 CGTCTGGGGTGGTGCTGG 62.705 72.222 0.00 0.00 0.00 4.85
105 106 4.351054 GTCTGGGGTGGTGCTGGG 62.351 72.222 0.00 0.00 0.00 4.45
109 110 4.233558 GGGGTGGTGCTGGGGTTT 62.234 66.667 0.00 0.00 0.00 3.27
110 111 2.917227 GGGTGGTGCTGGGGTTTG 60.917 66.667 0.00 0.00 0.00 2.93
111 112 2.917227 GGTGGTGCTGGGGTTTGG 60.917 66.667 0.00 0.00 0.00 3.28
112 113 2.917227 GTGGTGCTGGGGTTTGGG 60.917 66.667 0.00 0.00 0.00 4.12
113 114 3.434179 TGGTGCTGGGGTTTGGGT 61.434 61.111 0.00 0.00 0.00 4.51
114 115 2.123033 GGTGCTGGGGTTTGGGTT 60.123 61.111 0.00 0.00 0.00 4.11
115 116 2.506957 GGTGCTGGGGTTTGGGTTG 61.507 63.158 0.00 0.00 0.00 3.77
116 117 2.123077 TGCTGGGGTTTGGGTTGG 60.123 61.111 0.00 0.00 0.00 3.77
117 118 2.200092 GCTGGGGTTTGGGTTGGA 59.800 61.111 0.00 0.00 0.00 3.53
118 119 1.458588 GCTGGGGTTTGGGTTGGAA 60.459 57.895 0.00 0.00 0.00 3.53
119 120 1.471829 GCTGGGGTTTGGGTTGGAAG 61.472 60.000 0.00 0.00 0.00 3.46
120 121 0.187361 CTGGGGTTTGGGTTGGAAGA 59.813 55.000 0.00 0.00 0.00 2.87
121 122 0.637195 TGGGGTTTGGGTTGGAAGAA 59.363 50.000 0.00 0.00 0.00 2.52
122 123 1.008449 TGGGGTTTGGGTTGGAAGAAA 59.992 47.619 0.00 0.00 0.00 2.52
123 124 2.334977 GGGGTTTGGGTTGGAAGAAAT 58.665 47.619 0.00 0.00 0.00 2.17
124 125 2.301870 GGGGTTTGGGTTGGAAGAAATC 59.698 50.000 0.00 0.00 0.00 2.17
125 126 3.239449 GGGTTTGGGTTGGAAGAAATCT 58.761 45.455 0.00 0.00 0.00 2.40
126 127 3.258372 GGGTTTGGGTTGGAAGAAATCTC 59.742 47.826 0.00 0.00 0.00 2.75
127 128 4.152647 GGTTTGGGTTGGAAGAAATCTCT 58.847 43.478 0.00 0.00 0.00 3.10
128 129 4.021981 GGTTTGGGTTGGAAGAAATCTCTG 60.022 45.833 0.00 0.00 30.03 3.35
129 130 3.439857 TGGGTTGGAAGAAATCTCTGG 57.560 47.619 0.00 0.00 30.03 3.86
130 131 2.095461 GGGTTGGAAGAAATCTCTGGC 58.905 52.381 0.00 0.00 30.03 4.85
131 132 2.555227 GGGTTGGAAGAAATCTCTGGCA 60.555 50.000 0.00 0.00 30.03 4.92
132 133 2.751806 GGTTGGAAGAAATCTCTGGCAG 59.248 50.000 8.58 8.58 30.03 4.85
133 134 3.416156 GTTGGAAGAAATCTCTGGCAGT 58.584 45.455 15.27 0.00 30.03 4.40
134 135 3.795688 TGGAAGAAATCTCTGGCAGTT 57.204 42.857 15.27 0.40 30.03 3.16
135 136 3.679389 TGGAAGAAATCTCTGGCAGTTC 58.321 45.455 15.27 10.72 30.03 3.01
136 137 3.328931 TGGAAGAAATCTCTGGCAGTTCT 59.671 43.478 15.27 12.89 30.03 3.01
137 138 4.202503 TGGAAGAAATCTCTGGCAGTTCTT 60.203 41.667 23.11 23.11 40.35 2.52
138 139 4.764308 GGAAGAAATCTCTGGCAGTTCTTT 59.236 41.667 23.50 16.79 38.36 2.52
139 140 5.106357 GGAAGAAATCTCTGGCAGTTCTTTC 60.106 44.000 23.50 20.02 38.36 2.62
140 141 3.999663 AGAAATCTCTGGCAGTTCTTTCG 59.000 43.478 15.27 0.00 0.00 3.46
141 142 2.393271 ATCTCTGGCAGTTCTTTCGG 57.607 50.000 15.27 0.00 0.00 4.30
142 143 0.320771 TCTCTGGCAGTTCTTTCGGC 60.321 55.000 15.27 0.00 0.00 5.54
143 144 1.301677 CTCTGGCAGTTCTTTCGGCC 61.302 60.000 15.27 0.00 46.05 6.13
144 145 1.302832 CTGGCAGTTCTTTCGGCCT 60.303 57.895 6.28 0.00 46.04 5.19
145 146 1.301677 CTGGCAGTTCTTTCGGCCTC 61.302 60.000 6.28 0.00 46.04 4.70
146 147 2.391389 GGCAGTTCTTTCGGCCTCG 61.391 63.158 0.00 0.00 43.39 4.63
147 148 1.374252 GCAGTTCTTTCGGCCTCGA 60.374 57.895 0.00 0.00 44.44 4.04
148 149 1.627550 GCAGTTCTTTCGGCCTCGAC 61.628 60.000 0.00 0.00 45.92 4.20
149 150 1.080705 AGTTCTTTCGGCCTCGACG 60.081 57.895 0.00 0.00 45.92 5.12
150 151 2.431942 TTCTTTCGGCCTCGACGC 60.432 61.111 0.00 0.00 45.92 5.19
151 152 4.771356 TCTTTCGGCCTCGACGCG 62.771 66.667 3.53 3.53 45.92 6.01
175 176 3.625897 CCTGTGGGTGTCGCCTGA 61.626 66.667 1.66 0.00 37.43 3.86
176 177 2.357517 CTGTGGGTGTCGCCTGAC 60.358 66.667 1.66 0.54 45.71 3.51
177 178 3.883744 CTGTGGGTGTCGCCTGACC 62.884 68.421 1.66 0.00 44.86 4.02
178 179 3.626924 GTGGGTGTCGCCTGACCT 61.627 66.667 1.66 0.00 44.86 3.85
179 180 2.847234 TGGGTGTCGCCTGACCTT 60.847 61.111 1.66 0.00 44.86 3.50
180 181 2.047179 GGGTGTCGCCTGACCTTC 60.047 66.667 1.66 0.00 44.86 3.46
181 182 2.047179 GGTGTCGCCTGACCTTCC 60.047 66.667 0.00 0.00 44.86 3.46
182 183 2.584391 GGTGTCGCCTGACCTTCCT 61.584 63.158 0.00 0.00 44.86 3.36
183 184 1.374758 GTGTCGCCTGACCTTCCTG 60.375 63.158 0.00 0.00 44.86 3.86
184 185 1.533033 TGTCGCCTGACCTTCCTGA 60.533 57.895 0.00 0.00 44.86 3.86
185 186 1.118965 TGTCGCCTGACCTTCCTGAA 61.119 55.000 0.00 0.00 44.86 3.02
186 187 0.390472 GTCGCCTGACCTTCCTGAAG 60.390 60.000 0.00 0.00 39.30 3.02
487 488 3.211718 ACCCTAGGACTAGCTAGTTCG 57.788 52.381 26.71 14.42 36.90 3.95
488 489 2.158638 ACCCTAGGACTAGCTAGTTCGG 60.159 54.545 26.71 21.92 36.90 4.30
489 490 2.506444 CCTAGGACTAGCTAGTTCGGG 58.494 57.143 26.71 24.75 36.90 5.14
490 491 1.881324 CTAGGACTAGCTAGTTCGGGC 59.119 57.143 26.71 13.65 36.90 6.13
491 492 0.033405 AGGACTAGCTAGTTCGGGCA 60.033 55.000 26.71 0.00 36.90 5.36
492 493 0.822164 GGACTAGCTAGTTCGGGCAA 59.178 55.000 26.71 0.00 36.50 4.52
493 494 1.471153 GGACTAGCTAGTTCGGGCAAC 60.471 57.143 26.71 11.55 36.50 4.17
494 495 1.203994 GACTAGCTAGTTCGGGCAACA 59.796 52.381 26.71 0.00 37.48 3.33
495 496 1.204941 ACTAGCTAGTTCGGGCAACAG 59.795 52.381 20.95 0.00 37.48 3.16
496 497 0.108329 TAGCTAGTTCGGGCAACAGC 60.108 55.000 0.00 0.00 38.45 4.40
497 498 2.740714 GCTAGTTCGGGCAACAGCG 61.741 63.158 0.00 0.00 37.48 5.18
498 499 1.080093 CTAGTTCGGGCAACAGCGA 60.080 57.895 0.00 0.00 37.48 4.93
499 500 1.352156 CTAGTTCGGGCAACAGCGAC 61.352 60.000 0.00 0.00 37.48 5.19
500 501 4.072088 GTTCGGGCAACAGCGACG 62.072 66.667 0.00 0.00 34.76 5.12
501 502 4.595538 TTCGGGCAACAGCGACGT 62.596 61.111 0.00 0.00 39.74 4.34
505 506 3.764049 GGCAACAGCGACGTCGTC 61.764 66.667 35.48 27.15 42.22 4.20
516 517 4.814342 CGTCGTCGTCGTCTCTTT 57.186 55.556 3.67 0.00 38.33 2.52
517 518 2.611685 CGTCGTCGTCGTCTCTTTC 58.388 57.895 3.67 0.00 38.33 2.62
518 519 0.163360 CGTCGTCGTCGTCTCTTTCT 59.837 55.000 3.67 0.00 38.33 2.52
519 520 1.398198 CGTCGTCGTCGTCTCTTTCTT 60.398 52.381 3.67 0.00 38.33 2.52
520 521 1.970608 GTCGTCGTCGTCTCTTTCTTG 59.029 52.381 1.33 0.00 38.33 3.02
521 522 1.869132 TCGTCGTCGTCTCTTTCTTGA 59.131 47.619 1.33 0.00 38.33 3.02
522 523 2.288729 TCGTCGTCGTCTCTTTCTTGAA 59.711 45.455 1.33 0.00 38.33 2.69
523 524 2.652642 CGTCGTCGTCTCTTTCTTGAAG 59.347 50.000 0.00 0.00 36.67 3.02
524 525 2.981140 GTCGTCGTCTCTTTCTTGAAGG 59.019 50.000 0.00 0.00 35.98 3.46
525 526 2.621998 TCGTCGTCTCTTTCTTGAAGGT 59.378 45.455 0.00 0.00 35.98 3.50
526 527 2.726760 CGTCGTCTCTTTCTTGAAGGTG 59.273 50.000 0.00 0.00 35.98 4.00
527 528 3.718815 GTCGTCTCTTTCTTGAAGGTGT 58.281 45.455 0.00 0.00 35.98 4.16
528 529 4.120589 GTCGTCTCTTTCTTGAAGGTGTT 58.879 43.478 0.00 0.00 35.98 3.32
529 530 4.025647 GTCGTCTCTTTCTTGAAGGTGTTG 60.026 45.833 0.00 0.00 35.98 3.33
530 531 3.303395 CGTCTCTTTCTTGAAGGTGTTGC 60.303 47.826 0.00 0.00 35.98 4.17
531 532 3.879892 GTCTCTTTCTTGAAGGTGTTGCT 59.120 43.478 0.00 0.00 35.98 3.91
532 533 4.336713 GTCTCTTTCTTGAAGGTGTTGCTT 59.663 41.667 0.00 0.00 35.98 3.91
533 534 4.336433 TCTCTTTCTTGAAGGTGTTGCTTG 59.664 41.667 0.00 0.00 35.98 4.01
534 535 3.381272 TCTTTCTTGAAGGTGTTGCTTGG 59.619 43.478 0.00 0.00 35.98 3.61
535 536 2.435372 TCTTGAAGGTGTTGCTTGGT 57.565 45.000 0.00 0.00 0.00 3.67
536 537 3.569194 TCTTGAAGGTGTTGCTTGGTA 57.431 42.857 0.00 0.00 0.00 3.25
537 538 3.211045 TCTTGAAGGTGTTGCTTGGTAC 58.789 45.455 0.00 0.00 0.00 3.34
538 539 1.588674 TGAAGGTGTTGCTTGGTACG 58.411 50.000 0.00 0.00 0.00 3.67
539 540 0.237498 GAAGGTGTTGCTTGGTACGC 59.763 55.000 0.00 0.00 0.00 4.42
540 541 1.503818 AAGGTGTTGCTTGGTACGCG 61.504 55.000 3.53 3.53 0.00 6.01
541 542 2.554272 GTGTTGCTTGGTACGCGG 59.446 61.111 12.47 0.00 0.00 6.46
542 543 3.350612 TGTTGCTTGGTACGCGGC 61.351 61.111 12.47 2.91 0.00 6.53
543 544 4.439472 GTTGCTTGGTACGCGGCG 62.439 66.667 22.36 22.36 0.00 6.46
547 548 3.849953 CTTGGTACGCGGCGCTTC 61.850 66.667 30.54 18.39 0.00 3.86
559 560 4.069232 CGCTTCGGAGTGCTGGGA 62.069 66.667 0.00 0.00 0.00 4.37
560 561 2.125350 GCTTCGGAGTGCTGGGAG 60.125 66.667 0.00 0.00 0.00 4.30
561 562 2.125350 CTTCGGAGTGCTGGGAGC 60.125 66.667 0.00 0.00 42.82 4.70
562 563 3.997064 CTTCGGAGTGCTGGGAGCG 62.997 68.421 0.00 0.00 46.26 5.03
565 566 4.767255 GGAGTGCTGGGAGCGTGG 62.767 72.222 0.00 0.00 46.26 4.94
566 567 4.008933 GAGTGCTGGGAGCGTGGT 62.009 66.667 0.00 0.00 46.26 4.16
567 568 4.320456 AGTGCTGGGAGCGTGGTG 62.320 66.667 0.00 0.00 46.26 4.17
570 571 3.702048 GCTGGGAGCGTGGTGGTA 61.702 66.667 0.00 0.00 0.00 3.25
571 572 2.264794 CTGGGAGCGTGGTGGTAC 59.735 66.667 0.00 0.00 0.00 3.34
572 573 2.203728 TGGGAGCGTGGTGGTACT 60.204 61.111 0.00 0.00 0.00 2.73
573 574 1.827399 CTGGGAGCGTGGTGGTACTT 61.827 60.000 0.00 0.00 0.00 2.24
574 575 1.079336 GGGAGCGTGGTGGTACTTC 60.079 63.158 0.00 0.00 0.00 3.01
575 576 1.542187 GGGAGCGTGGTGGTACTTCT 61.542 60.000 0.00 0.00 0.00 2.85
576 577 0.108756 GGAGCGTGGTGGTACTTCTC 60.109 60.000 0.00 0.00 0.00 2.87
577 578 0.889306 GAGCGTGGTGGTACTTCTCT 59.111 55.000 0.00 0.00 0.00 3.10
578 579 0.603569 AGCGTGGTGGTACTTCTCTG 59.396 55.000 0.00 0.00 0.00 3.35
579 580 0.389948 GCGTGGTGGTACTTCTCTGG 60.390 60.000 0.00 0.00 0.00 3.86
580 581 1.254026 CGTGGTGGTACTTCTCTGGA 58.746 55.000 0.00 0.00 0.00 3.86
581 582 1.202582 CGTGGTGGTACTTCTCTGGAG 59.797 57.143 0.00 0.00 0.00 3.86
582 583 1.550976 GTGGTGGTACTTCTCTGGAGG 59.449 57.143 0.00 0.00 0.00 4.30
583 584 1.196012 GGTGGTACTTCTCTGGAGGG 58.804 60.000 0.00 0.00 0.00 4.30
584 585 1.552719 GGTGGTACTTCTCTGGAGGGT 60.553 57.143 0.00 1.20 0.00 4.34
585 586 1.550976 GTGGTACTTCTCTGGAGGGTG 59.449 57.143 0.00 0.00 0.00 4.61
586 587 0.537653 GGTACTTCTCTGGAGGGTGC 59.462 60.000 0.00 2.14 0.00 5.01
587 588 1.267121 GTACTTCTCTGGAGGGTGCA 58.733 55.000 0.00 0.00 0.00 4.57
588 589 1.205893 GTACTTCTCTGGAGGGTGCAG 59.794 57.143 0.00 0.00 37.15 4.41
589 590 1.078567 CTTCTCTGGAGGGTGCAGC 60.079 63.158 7.55 7.55 35.65 5.25
590 591 2.849120 CTTCTCTGGAGGGTGCAGCG 62.849 65.000 10.24 0.00 35.65 5.18
591 592 4.463879 CTCTGGAGGGTGCAGCGG 62.464 72.222 10.24 0.00 35.65 5.52
593 594 4.767255 CTGGAGGGTGCAGCGGTC 62.767 72.222 10.24 9.00 0.00 4.79
608 609 4.395583 GTCGCCGGTCGTCTTCGT 62.396 66.667 16.00 0.00 39.67 3.85
609 610 3.663176 TCGCCGGTCGTCTTCGTT 61.663 61.111 16.00 0.00 39.67 3.85
610 611 3.170585 CGCCGGTCGTCTTCGTTC 61.171 66.667 1.90 0.00 38.33 3.95
611 612 3.170585 GCCGGTCGTCTTCGTTCG 61.171 66.667 1.90 0.00 38.33 3.95
612 613 2.253452 CCGGTCGTCTTCGTTCGT 59.747 61.111 0.00 0.00 38.33 3.85
613 614 1.370900 CCGGTCGTCTTCGTTCGTT 60.371 57.895 0.00 0.00 38.33 3.85
614 615 1.602877 CCGGTCGTCTTCGTTCGTTG 61.603 60.000 0.00 0.00 38.33 4.10
615 616 0.658244 CGGTCGTCTTCGTTCGTTGA 60.658 55.000 0.00 0.00 38.33 3.18
616 617 1.694639 GGTCGTCTTCGTTCGTTGAT 58.305 50.000 0.00 0.00 38.33 2.57
617 618 1.647702 GGTCGTCTTCGTTCGTTGATC 59.352 52.381 0.00 0.00 38.33 2.92
618 619 2.582687 GTCGTCTTCGTTCGTTGATCT 58.417 47.619 0.00 0.00 38.33 2.75
619 620 2.338813 GTCGTCTTCGTTCGTTGATCTG 59.661 50.000 0.00 0.00 38.33 2.90
620 621 1.057847 CGTCTTCGTTCGTTGATCTGC 59.942 52.381 0.00 0.00 0.00 4.26
621 622 1.390463 GTCTTCGTTCGTTGATCTGCC 59.610 52.381 0.00 0.00 0.00 4.85
622 623 1.000394 TCTTCGTTCGTTGATCTGCCA 60.000 47.619 0.00 0.00 0.00 4.92
623 624 2.002586 CTTCGTTCGTTGATCTGCCAT 58.997 47.619 0.00 0.00 0.00 4.40
624 625 2.093306 TCGTTCGTTGATCTGCCATT 57.907 45.000 0.00 0.00 0.00 3.16
625 626 1.731709 TCGTTCGTTGATCTGCCATTG 59.268 47.619 0.00 0.00 0.00 2.82
626 627 1.464608 CGTTCGTTGATCTGCCATTGT 59.535 47.619 0.00 0.00 0.00 2.71
627 628 2.095768 CGTTCGTTGATCTGCCATTGTT 60.096 45.455 0.00 0.00 0.00 2.83
628 629 3.236816 GTTCGTTGATCTGCCATTGTTG 58.763 45.455 0.00 0.00 0.00 3.33
629 630 1.199789 TCGTTGATCTGCCATTGTTGC 59.800 47.619 0.00 0.00 0.00 4.17
630 631 1.068402 CGTTGATCTGCCATTGTTGCA 60.068 47.619 0.00 0.00 37.17 4.08
631 632 2.416296 CGTTGATCTGCCATTGTTGCAT 60.416 45.455 0.00 0.00 38.22 3.96
632 633 3.592059 GTTGATCTGCCATTGTTGCATT 58.408 40.909 0.00 0.00 38.22 3.56
633 634 4.674885 CGTTGATCTGCCATTGTTGCATTA 60.675 41.667 0.00 0.00 38.22 1.90
634 635 4.642445 TGATCTGCCATTGTTGCATTAG 57.358 40.909 0.00 0.00 38.22 1.73
635 636 4.018490 TGATCTGCCATTGTTGCATTAGT 58.982 39.130 0.00 0.00 38.22 2.24
636 637 4.463539 TGATCTGCCATTGTTGCATTAGTT 59.536 37.500 0.00 0.00 38.22 2.24
637 638 4.870123 TCTGCCATTGTTGCATTAGTTT 57.130 36.364 0.00 0.00 38.22 2.66
638 639 5.212532 TCTGCCATTGTTGCATTAGTTTT 57.787 34.783 0.00 0.00 38.22 2.43
639 640 5.609423 TCTGCCATTGTTGCATTAGTTTTT 58.391 33.333 0.00 0.00 38.22 1.94
640 641 5.695816 TCTGCCATTGTTGCATTAGTTTTTC 59.304 36.000 0.00 0.00 38.22 2.29
641 642 5.609423 TGCCATTGTTGCATTAGTTTTTCT 58.391 33.333 0.00 0.00 32.85 2.52
642 643 6.054295 TGCCATTGTTGCATTAGTTTTTCTT 58.946 32.000 0.00 0.00 32.85 2.52
643 644 6.541641 TGCCATTGTTGCATTAGTTTTTCTTT 59.458 30.769 0.00 0.00 32.85 2.52
644 645 7.071414 GCCATTGTTGCATTAGTTTTTCTTTC 58.929 34.615 0.00 0.00 0.00 2.62
645 646 7.041848 GCCATTGTTGCATTAGTTTTTCTTTCT 60.042 33.333 0.00 0.00 0.00 2.52
646 647 8.829612 CCATTGTTGCATTAGTTTTTCTTTCTT 58.170 29.630 0.00 0.00 0.00 2.52
678 679 2.777832 TTTTTGGGCTTGTTTGTGCT 57.222 40.000 0.00 0.00 0.00 4.40
679 680 2.021355 TTTTGGGCTTGTTTGTGCTG 57.979 45.000 0.00 0.00 0.00 4.41
680 681 0.461693 TTTGGGCTTGTTTGTGCTGC 60.462 50.000 0.00 0.00 0.00 5.25
681 682 2.355009 GGGCTTGTTTGTGCTGCG 60.355 61.111 0.00 0.00 0.00 5.18
682 683 2.355009 GGCTTGTTTGTGCTGCGG 60.355 61.111 0.00 0.00 0.00 5.69
683 684 3.032033 GCTTGTTTGTGCTGCGGC 61.032 61.111 11.65 11.65 39.26 6.53
684 685 2.355009 CTTGTTTGTGCTGCGGCC 60.355 61.111 16.57 7.08 37.74 6.13
685 686 2.832661 TTGTTTGTGCTGCGGCCT 60.833 55.556 16.57 0.00 37.74 5.19
686 687 2.737932 CTTGTTTGTGCTGCGGCCTC 62.738 60.000 16.57 8.98 37.74 4.70
687 688 3.286751 GTTTGTGCTGCGGCCTCA 61.287 61.111 16.57 11.72 37.74 3.86
688 689 2.979676 TTTGTGCTGCGGCCTCAG 60.980 61.111 18.74 18.74 37.74 3.35
694 695 3.774528 CTGCGGCCTCAGCACCTA 61.775 66.667 10.36 0.00 42.56 3.08
695 696 3.083349 TGCGGCCTCAGCACCTAT 61.083 61.111 0.00 0.00 42.56 2.57
696 697 2.280457 GCGGCCTCAGCACCTATC 60.280 66.667 0.00 0.00 42.56 2.08
697 698 2.028190 CGGCCTCAGCACCTATCG 59.972 66.667 0.00 0.00 42.56 2.92
698 699 2.786495 CGGCCTCAGCACCTATCGT 61.786 63.158 0.00 0.00 42.56 3.73
699 700 1.522569 GGCCTCAGCACCTATCGTT 59.477 57.895 0.00 0.00 42.56 3.85
700 701 0.811616 GGCCTCAGCACCTATCGTTG 60.812 60.000 0.00 0.00 42.56 4.10
701 702 0.811616 GCCTCAGCACCTATCGTTGG 60.812 60.000 0.00 0.00 39.53 3.77
702 703 0.824109 CCTCAGCACCTATCGTTGGA 59.176 55.000 0.00 0.00 0.00 3.53
703 704 1.414181 CCTCAGCACCTATCGTTGGAT 59.586 52.381 0.00 0.00 36.65 3.41
704 705 2.477825 CTCAGCACCTATCGTTGGATG 58.522 52.381 0.00 0.00 34.00 3.51
705 706 1.831106 TCAGCACCTATCGTTGGATGT 59.169 47.619 0.00 0.00 34.00 3.06
706 707 3.028130 TCAGCACCTATCGTTGGATGTA 58.972 45.455 0.00 0.00 34.00 2.29
707 708 3.641436 TCAGCACCTATCGTTGGATGTAT 59.359 43.478 0.00 0.00 34.00 2.29
708 709 3.990469 CAGCACCTATCGTTGGATGTATC 59.010 47.826 0.00 0.00 34.00 2.24
709 710 2.987149 GCACCTATCGTTGGATGTATCG 59.013 50.000 0.00 0.00 34.00 2.92
710 711 3.575630 CACCTATCGTTGGATGTATCGG 58.424 50.000 0.00 0.00 34.00 4.18
711 712 3.005472 CACCTATCGTTGGATGTATCGGT 59.995 47.826 0.00 0.00 34.00 4.69
712 713 3.005472 ACCTATCGTTGGATGTATCGGTG 59.995 47.826 0.00 0.00 34.00 4.94
713 714 2.526304 ATCGTTGGATGTATCGGTGG 57.474 50.000 0.00 0.00 0.00 4.61
714 715 1.187974 TCGTTGGATGTATCGGTGGT 58.812 50.000 0.00 0.00 0.00 4.16
715 716 1.551430 TCGTTGGATGTATCGGTGGTT 59.449 47.619 0.00 0.00 0.00 3.67
716 717 1.663643 CGTTGGATGTATCGGTGGTTG 59.336 52.381 0.00 0.00 0.00 3.77
717 718 1.400494 GTTGGATGTATCGGTGGTTGC 59.600 52.381 0.00 0.00 0.00 4.17
718 719 0.908910 TGGATGTATCGGTGGTTGCT 59.091 50.000 0.00 0.00 0.00 3.91
719 720 1.280710 TGGATGTATCGGTGGTTGCTT 59.719 47.619 0.00 0.00 0.00 3.91
720 721 2.290641 TGGATGTATCGGTGGTTGCTTT 60.291 45.455 0.00 0.00 0.00 3.51
721 722 2.097466 GGATGTATCGGTGGTTGCTTTG 59.903 50.000 0.00 0.00 0.00 2.77
722 723 2.264005 TGTATCGGTGGTTGCTTTGT 57.736 45.000 0.00 0.00 0.00 2.83
723 724 3.404224 TGTATCGGTGGTTGCTTTGTA 57.596 42.857 0.00 0.00 0.00 2.41
724 725 3.741249 TGTATCGGTGGTTGCTTTGTAA 58.259 40.909 0.00 0.00 0.00 2.41
725 726 4.328536 TGTATCGGTGGTTGCTTTGTAAT 58.671 39.130 0.00 0.00 0.00 1.89
726 727 5.489249 TGTATCGGTGGTTGCTTTGTAATA 58.511 37.500 0.00 0.00 0.00 0.98
727 728 4.957759 ATCGGTGGTTGCTTTGTAATAC 57.042 40.909 0.00 0.00 0.00 1.89
728 729 3.741249 TCGGTGGTTGCTTTGTAATACA 58.259 40.909 0.00 0.00 0.00 2.29
729 730 4.135306 TCGGTGGTTGCTTTGTAATACAA 58.865 39.130 1.08 1.08 36.11 2.41
730 731 4.579340 TCGGTGGTTGCTTTGTAATACAAA 59.421 37.500 16.57 16.57 44.91 2.83
740 741 4.769859 TTGTAATACAAAGCGGGGAAAC 57.230 40.909 2.97 0.00 34.76 2.78
741 742 3.506844 TTGTAATACAAAGCGGGGAAACC 59.493 43.478 2.97 0.00 42.37 3.27
765 766 6.979238 CCCTTTTTCGTAGAGTATACTTGAGG 59.021 42.308 6.88 4.34 38.43 3.86
918 924 2.101640 AGGTGGTTTTGGGCTTCAAT 57.898 45.000 0.00 0.00 34.98 2.57
919 925 2.407562 AGGTGGTTTTGGGCTTCAATT 58.592 42.857 0.00 0.00 34.98 2.32
920 926 2.777114 AGGTGGTTTTGGGCTTCAATTT 59.223 40.909 0.00 0.00 34.98 1.82
921 927 3.138304 GGTGGTTTTGGGCTTCAATTTC 58.862 45.455 0.00 0.00 34.98 2.17
922 928 3.432890 GGTGGTTTTGGGCTTCAATTTCA 60.433 43.478 0.00 0.00 34.98 2.69
923 929 4.388485 GTGGTTTTGGGCTTCAATTTCAT 58.612 39.130 0.00 0.00 34.98 2.57
924 930 4.821260 GTGGTTTTGGGCTTCAATTTCATT 59.179 37.500 0.00 0.00 34.98 2.57
925 931 5.049474 GTGGTTTTGGGCTTCAATTTCATTC 60.049 40.000 0.00 0.00 34.98 2.67
926 932 4.152223 GGTTTTGGGCTTCAATTTCATTCG 59.848 41.667 0.00 0.00 34.98 3.34
927 933 4.599047 TTTGGGCTTCAATTTCATTCGT 57.401 36.364 0.00 0.00 34.98 3.85
928 934 3.848272 TGGGCTTCAATTTCATTCGTC 57.152 42.857 0.00 0.00 0.00 4.20
929 935 3.153130 TGGGCTTCAATTTCATTCGTCA 58.847 40.909 0.00 0.00 0.00 4.35
930 936 3.571828 TGGGCTTCAATTTCATTCGTCAA 59.428 39.130 0.00 0.00 0.00 3.18
1733 2328 1.153469 GCCAGAGCCTAGCTGTGTC 60.153 63.158 12.11 0.00 46.46 3.67
1905 2509 3.146847 GGGACGAACTTTTGAACTGGAT 58.853 45.455 0.00 0.00 0.00 3.41
1932 2536 6.069731 AGCTACTTCCCTTGAATTCAGAGAAT 60.070 38.462 8.41 6.39 0.00 2.40
1945 2549 7.496920 TGAATTCAGAGAATATAAGGCACACAG 59.503 37.037 3.38 0.00 0.00 3.66
2058 2662 8.974060 TCAGTAAACTTCCTGAAAACAGTAAT 57.026 30.769 0.00 0.00 34.88 1.89
2251 2868 3.385755 ACCTGTTTCTTTTGCTGCTTGAT 59.614 39.130 0.00 0.00 0.00 2.57
2302 3125 8.560576 AATTTGTTCAGTAATGTTTCTGTTCG 57.439 30.769 0.00 0.00 33.89 3.95
2315 3154 1.069978 TCTGTTCGGATGCTTGTGTGA 59.930 47.619 0.00 0.00 0.00 3.58
2316 3155 1.462283 CTGTTCGGATGCTTGTGTGAG 59.538 52.381 0.00 0.00 0.00 3.51
2334 3175 6.939730 TGTGTGAGAGCTTTATTTGATGGTTA 59.060 34.615 0.00 0.00 0.00 2.85
2335 3176 7.611467 TGTGTGAGAGCTTTATTTGATGGTTAT 59.389 33.333 0.00 0.00 0.00 1.89
2336 3177 7.912250 GTGTGAGAGCTTTATTTGATGGTTATG 59.088 37.037 0.00 0.00 0.00 1.90
2337 3178 7.828717 TGTGAGAGCTTTATTTGATGGTTATGA 59.171 33.333 0.00 0.00 0.00 2.15
2338 3179 8.677300 GTGAGAGCTTTATTTGATGGTTATGAA 58.323 33.333 0.00 0.00 0.00 2.57
2339 3180 8.677300 TGAGAGCTTTATTTGATGGTTATGAAC 58.323 33.333 0.00 0.00 0.00 3.18
2340 3181 8.814038 AGAGCTTTATTTGATGGTTATGAACT 57.186 30.769 0.00 0.00 0.00 3.01
2341 3182 9.247861 AGAGCTTTATTTGATGGTTATGAACTT 57.752 29.630 0.00 0.00 0.00 2.66
2352 3193 7.933577 TGATGGTTATGAACTTATGATCTGGAC 59.066 37.037 0.00 0.00 0.00 4.02
2367 3208 5.481824 TGATCTGGACTCACATCTGTTACTT 59.518 40.000 0.00 0.00 0.00 2.24
2375 3216 6.857956 ACTCACATCTGTTACTTGTAGCTAG 58.142 40.000 0.00 0.00 0.00 3.42
2380 3221 6.659668 ACATCTGTTACTTGTAGCTAGTCTGA 59.340 38.462 0.00 0.00 0.00 3.27
2419 3260 5.181245 CCTTTTATGTCACCAGTTCATCGTT 59.819 40.000 0.00 0.00 0.00 3.85
2420 3261 6.370442 CCTTTTATGTCACCAGTTCATCGTTA 59.630 38.462 0.00 0.00 0.00 3.18
2421 3262 7.065803 CCTTTTATGTCACCAGTTCATCGTTAT 59.934 37.037 0.00 0.00 0.00 1.89
2422 3263 7.915293 TTTATGTCACCAGTTCATCGTTATT 57.085 32.000 0.00 0.00 0.00 1.40
2423 3264 7.915293 TTATGTCACCAGTTCATCGTTATTT 57.085 32.000 0.00 0.00 0.00 1.40
2424 3265 6.817765 ATGTCACCAGTTCATCGTTATTTT 57.182 33.333 0.00 0.00 0.00 1.82
2425 3266 5.996219 TGTCACCAGTTCATCGTTATTTTG 58.004 37.500 0.00 0.00 0.00 2.44
2431 3272 7.904977 CACCAGTTCATCGTTATTTTGTATCTG 59.095 37.037 0.00 0.00 0.00 2.90
2517 3361 4.871933 TGTGCTTCAAGTCAGACATAGA 57.128 40.909 2.66 0.00 0.00 1.98
2521 3365 6.712095 TGTGCTTCAAGTCAGACATAGAAAAT 59.288 34.615 2.66 0.00 0.00 1.82
2687 3539 3.072330 TGGTGCAGGTCTTTCTCATGTTA 59.928 43.478 0.00 0.00 0.00 2.41
2800 3653 8.870160 TTTTTCCAGATTACATTTGTGAGTTG 57.130 30.769 0.00 0.00 0.00 3.16
2975 3844 9.570468 AAGCTTATCATCTGAATGTATGTTGAT 57.430 29.630 0.00 0.00 34.32 2.57
3066 6113 8.956426 CAAATACTAAATTGCAAGAGAGGGTTA 58.044 33.333 4.94 0.00 0.00 2.85
3122 6169 1.004044 CTCACCTGGCCACTTCTCATT 59.996 52.381 0.00 0.00 0.00 2.57
3246 6549 1.211456 CTTGCCTCTCCCTTCCATCT 58.789 55.000 0.00 0.00 0.00 2.90
3290 6594 4.234693 ACCTCCTCCTTAGTACTACCCAAT 59.765 45.833 0.91 0.00 0.00 3.16
3292 6596 5.666265 CCTCCTCCTTAGTACTACCCAATTT 59.334 44.000 0.91 0.00 0.00 1.82
3328 6633 3.517500 CTGGTTTTTCTCCCTCTAGCTCT 59.482 47.826 0.00 0.00 0.00 4.09
3372 6678 2.092699 CCTTTCCCCCTTTTGTGCAAAA 60.093 45.455 9.37 9.37 37.90 2.44
3381 6687 4.495514 CCCTTTTGTGCAAAATTTGTTCCG 60.496 41.667 7.60 0.00 39.29 4.30
3407 6721 5.984725 TCGGTCATAGATTACAATGGTGTT 58.015 37.500 0.00 0.00 39.30 3.32
3418 6732 9.733556 AGATTACAATGGTGTTATGTTAAGTGA 57.266 29.630 0.00 0.00 39.30 3.41
3604 6927 8.738645 ATCATTTGTTCTATACTTCCTTCACC 57.261 34.615 0.00 0.00 0.00 4.02
3637 6997 5.947228 TTATAGCTATGCCATTTCACAGC 57.053 39.130 16.77 0.00 36.79 4.40
3708 7069 5.128171 TGCCGTACTACTGTTTATCATTCCT 59.872 40.000 0.00 0.00 0.00 3.36
3709 7070 6.047231 GCCGTACTACTGTTTATCATTCCTT 58.953 40.000 0.00 0.00 0.00 3.36
3718 7079 8.177119 ACTGTTTATCATTCCTTTTGCAGTTA 57.823 30.769 0.00 0.00 30.50 2.24
3829 7190 3.058160 GGCCGTTGTCTGCTGCAT 61.058 61.111 1.31 0.00 0.00 3.96
3840 7201 6.808704 CGTTGTCTGCTGCATACTATATGTAT 59.191 38.462 17.39 0.00 42.18 2.29
3841 7202 7.329471 CGTTGTCTGCTGCATACTATATGTATT 59.671 37.037 17.39 0.00 39.66 1.89
3842 7203 8.993121 GTTGTCTGCTGCATACTATATGTATTT 58.007 33.333 17.39 0.00 39.66 1.40
3843 7204 8.538409 TGTCTGCTGCATACTATATGTATTTG 57.462 34.615 17.39 0.00 39.66 2.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.701780 CGTCTCCCTGAGGTCACCG 61.702 68.421 0.00 0.00 0.00 4.94
1 2 2.352032 CCGTCTCCCTGAGGTCACC 61.352 68.421 0.00 0.00 0.00 4.02
2 3 3.007973 GCCGTCTCCCTGAGGTCAC 62.008 68.421 0.00 0.00 0.00 3.67
3 4 2.680352 GCCGTCTCCCTGAGGTCA 60.680 66.667 0.00 0.00 0.00 4.02
4 5 3.827898 CGCCGTCTCCCTGAGGTC 61.828 72.222 0.00 0.00 0.00 3.85
5 6 3.881019 TTCGCCGTCTCCCTGAGGT 62.881 63.158 0.00 0.00 0.00 3.85
6 7 3.068691 TTCGCCGTCTCCCTGAGG 61.069 66.667 0.00 0.00 0.00 3.86
7 8 1.878656 AACTTCGCCGTCTCCCTGAG 61.879 60.000 0.00 0.00 0.00 3.35
8 9 1.906824 AACTTCGCCGTCTCCCTGA 60.907 57.895 0.00 0.00 0.00 3.86
9 10 1.738099 CAACTTCGCCGTCTCCCTG 60.738 63.158 0.00 0.00 0.00 4.45
10 11 1.258445 ATCAACTTCGCCGTCTCCCT 61.258 55.000 0.00 0.00 0.00 4.20
11 12 0.391263 AATCAACTTCGCCGTCTCCC 60.391 55.000 0.00 0.00 0.00 4.30
12 13 1.000145 GAATCAACTTCGCCGTCTCC 59.000 55.000 0.00 0.00 0.00 3.71
21 22 2.348666 CCACGATCACCGAATCAACTTC 59.651 50.000 0.00 0.00 41.76 3.01
22 23 2.289444 ACCACGATCACCGAATCAACTT 60.289 45.455 0.00 0.00 41.76 2.66
23 24 1.275291 ACCACGATCACCGAATCAACT 59.725 47.619 0.00 0.00 41.76 3.16
24 25 1.393539 CACCACGATCACCGAATCAAC 59.606 52.381 0.00 0.00 41.76 3.18
25 26 1.674519 CCACCACGATCACCGAATCAA 60.675 52.381 0.00 0.00 41.76 2.57
26 27 0.108377 CCACCACGATCACCGAATCA 60.108 55.000 0.00 0.00 41.76 2.57
27 28 1.429148 GCCACCACGATCACCGAATC 61.429 60.000 0.00 0.00 41.76 2.52
28 29 1.449601 GCCACCACGATCACCGAAT 60.450 57.895 0.00 0.00 41.76 3.34
29 30 2.047655 GCCACCACGATCACCGAA 60.048 61.111 0.00 0.00 41.76 4.30
30 31 3.307108 TGCCACCACGATCACCGA 61.307 61.111 0.00 0.00 41.76 4.69
31 32 3.118454 GTGCCACCACGATCACCG 61.118 66.667 0.00 0.00 45.44 4.94
32 33 1.377202 ATGTGCCACCACGATCACC 60.377 57.895 0.00 0.00 45.04 4.02
33 34 0.955428 ACATGTGCCACCACGATCAC 60.955 55.000 0.00 0.00 45.04 3.06
34 35 0.250684 AACATGTGCCACCACGATCA 60.251 50.000 0.00 0.00 45.04 2.92
35 36 0.168788 CAACATGTGCCACCACGATC 59.831 55.000 0.00 0.00 45.04 3.69
36 37 1.243342 CCAACATGTGCCACCACGAT 61.243 55.000 0.00 0.00 45.04 3.73
37 38 1.896183 CCAACATGTGCCACCACGA 60.896 57.895 0.00 0.00 45.04 4.35
38 39 2.192861 ACCAACATGTGCCACCACG 61.193 57.895 0.00 0.00 45.04 4.94
39 40 1.363443 CACCAACATGTGCCACCAC 59.637 57.895 0.00 0.00 42.40 4.16
40 41 1.831726 CCACCAACATGTGCCACCA 60.832 57.895 0.00 0.00 34.85 4.17
41 42 2.573083 CCCACCAACATGTGCCACC 61.573 63.158 0.00 0.00 34.85 4.61
42 43 0.538516 TACCCACCAACATGTGCCAC 60.539 55.000 0.00 0.00 34.85 5.01
43 44 0.251121 CTACCCACCAACATGTGCCA 60.251 55.000 0.00 0.00 34.85 4.92
44 45 1.595093 GCTACCCACCAACATGTGCC 61.595 60.000 0.00 0.00 34.85 5.01
45 46 1.883021 GCTACCCACCAACATGTGC 59.117 57.895 0.00 0.00 34.85 4.57
46 47 0.605319 ACGCTACCCACCAACATGTG 60.605 55.000 0.00 0.00 35.98 3.21
47 48 0.605319 CACGCTACCCACCAACATGT 60.605 55.000 0.00 0.00 0.00 3.21
48 49 0.321210 TCACGCTACCCACCAACATG 60.321 55.000 0.00 0.00 0.00 3.21
49 50 0.618458 ATCACGCTACCCACCAACAT 59.382 50.000 0.00 0.00 0.00 2.71
50 51 0.321210 CATCACGCTACCCACCAACA 60.321 55.000 0.00 0.00 0.00 3.33
51 52 1.024579 CCATCACGCTACCCACCAAC 61.025 60.000 0.00 0.00 0.00 3.77
52 53 1.298340 CCATCACGCTACCCACCAA 59.702 57.895 0.00 0.00 0.00 3.67
53 54 2.665089 CCCATCACGCTACCCACCA 61.665 63.158 0.00 0.00 0.00 4.17
54 55 2.189521 CCCATCACGCTACCCACC 59.810 66.667 0.00 0.00 0.00 4.61
55 56 2.513897 GCCCATCACGCTACCCAC 60.514 66.667 0.00 0.00 0.00 4.61
56 57 4.155733 CGCCCATCACGCTACCCA 62.156 66.667 0.00 0.00 0.00 4.51
57 58 3.165160 ATCGCCCATCACGCTACCC 62.165 63.158 0.00 0.00 0.00 3.69
58 59 1.956170 CATCGCCCATCACGCTACC 60.956 63.158 0.00 0.00 0.00 3.18
59 60 2.598632 GCATCGCCCATCACGCTAC 61.599 63.158 0.00 0.00 0.00 3.58
60 61 2.280119 GCATCGCCCATCACGCTA 60.280 61.111 0.00 0.00 0.00 4.26
61 62 4.471908 TGCATCGCCCATCACGCT 62.472 61.111 0.00 0.00 0.00 5.07
62 63 4.241999 GTGCATCGCCCATCACGC 62.242 66.667 0.00 0.00 0.00 5.34
63 64 0.601046 ATAGTGCATCGCCCATCACG 60.601 55.000 0.00 0.00 34.84 4.35
64 65 0.870393 CATAGTGCATCGCCCATCAC 59.130 55.000 0.00 0.00 0.00 3.06
65 66 0.758123 TCATAGTGCATCGCCCATCA 59.242 50.000 0.00 0.00 0.00 3.07
66 67 2.105006 ATCATAGTGCATCGCCCATC 57.895 50.000 0.00 0.00 0.00 3.51
67 68 2.430465 GAATCATAGTGCATCGCCCAT 58.570 47.619 0.00 0.00 0.00 4.00
68 69 1.873486 CGAATCATAGTGCATCGCCCA 60.873 52.381 0.00 0.00 0.00 5.36
69 70 0.792640 CGAATCATAGTGCATCGCCC 59.207 55.000 0.00 0.00 0.00 6.13
70 71 1.457303 GACGAATCATAGTGCATCGCC 59.543 52.381 3.67 0.00 37.03 5.54
71 72 2.154580 CAGACGAATCATAGTGCATCGC 59.845 50.000 3.67 0.00 37.03 4.58
72 73 2.728318 CCAGACGAATCATAGTGCATCG 59.272 50.000 2.27 2.27 39.30 3.84
73 74 3.062763 CCCAGACGAATCATAGTGCATC 58.937 50.000 0.00 0.00 0.00 3.91
74 75 2.224378 CCCCAGACGAATCATAGTGCAT 60.224 50.000 0.00 0.00 0.00 3.96
75 76 1.138859 CCCCAGACGAATCATAGTGCA 59.861 52.381 0.00 0.00 0.00 4.57
76 77 1.139058 ACCCCAGACGAATCATAGTGC 59.861 52.381 0.00 0.00 0.00 4.40
77 78 2.483714 CCACCCCAGACGAATCATAGTG 60.484 54.545 0.00 0.00 0.00 2.74
78 79 1.762957 CCACCCCAGACGAATCATAGT 59.237 52.381 0.00 0.00 0.00 2.12
79 80 1.762957 ACCACCCCAGACGAATCATAG 59.237 52.381 0.00 0.00 0.00 2.23
80 81 1.484653 CACCACCCCAGACGAATCATA 59.515 52.381 0.00 0.00 0.00 2.15
81 82 0.253044 CACCACCCCAGACGAATCAT 59.747 55.000 0.00 0.00 0.00 2.45
82 83 1.676968 CACCACCCCAGACGAATCA 59.323 57.895 0.00 0.00 0.00 2.57
83 84 1.745489 GCACCACCCCAGACGAATC 60.745 63.158 0.00 0.00 0.00 2.52
84 85 2.224159 AGCACCACCCCAGACGAAT 61.224 57.895 0.00 0.00 0.00 3.34
85 86 2.847234 AGCACCACCCCAGACGAA 60.847 61.111 0.00 0.00 0.00 3.85
86 87 3.625897 CAGCACCACCCCAGACGA 61.626 66.667 0.00 0.00 0.00 4.20
87 88 4.704833 CCAGCACCACCCCAGACG 62.705 72.222 0.00 0.00 0.00 4.18
88 89 4.351054 CCCAGCACCACCCCAGAC 62.351 72.222 0.00 0.00 0.00 3.51
92 93 4.233558 AAACCCCAGCACCACCCC 62.234 66.667 0.00 0.00 0.00 4.95
93 94 2.917227 CAAACCCCAGCACCACCC 60.917 66.667 0.00 0.00 0.00 4.61
94 95 2.917227 CCAAACCCCAGCACCACC 60.917 66.667 0.00 0.00 0.00 4.61
95 96 2.917227 CCCAAACCCCAGCACCAC 60.917 66.667 0.00 0.00 0.00 4.16
96 97 3.015332 AACCCAAACCCCAGCACCA 62.015 57.895 0.00 0.00 0.00 4.17
97 98 2.123033 AACCCAAACCCCAGCACC 60.123 61.111 0.00 0.00 0.00 5.01
98 99 2.506957 CCAACCCAAACCCCAGCAC 61.507 63.158 0.00 0.00 0.00 4.40
99 100 2.123077 CCAACCCAAACCCCAGCA 60.123 61.111 0.00 0.00 0.00 4.41
100 101 1.458588 TTCCAACCCAAACCCCAGC 60.459 57.895 0.00 0.00 0.00 4.85
101 102 0.187361 TCTTCCAACCCAAACCCCAG 59.813 55.000 0.00 0.00 0.00 4.45
102 103 0.637195 TTCTTCCAACCCAAACCCCA 59.363 50.000 0.00 0.00 0.00 4.96
103 104 1.796017 TTTCTTCCAACCCAAACCCC 58.204 50.000 0.00 0.00 0.00 4.95
104 105 3.239449 AGATTTCTTCCAACCCAAACCC 58.761 45.455 0.00 0.00 0.00 4.11
105 106 4.021981 CAGAGATTTCTTCCAACCCAAACC 60.022 45.833 0.00 0.00 0.00 3.27
106 107 4.021981 CCAGAGATTTCTTCCAACCCAAAC 60.022 45.833 0.00 0.00 0.00 2.93
107 108 4.151883 CCAGAGATTTCTTCCAACCCAAA 58.848 43.478 0.00 0.00 0.00 3.28
108 109 3.766545 CCAGAGATTTCTTCCAACCCAA 58.233 45.455 0.00 0.00 0.00 4.12
109 110 2.555227 GCCAGAGATTTCTTCCAACCCA 60.555 50.000 0.00 0.00 0.00 4.51
110 111 2.095461 GCCAGAGATTTCTTCCAACCC 58.905 52.381 0.00 0.00 0.00 4.11
111 112 2.751806 CTGCCAGAGATTTCTTCCAACC 59.248 50.000 0.00 0.00 0.00 3.77
112 113 3.416156 ACTGCCAGAGATTTCTTCCAAC 58.584 45.455 0.00 0.00 0.00 3.77
113 114 3.795688 ACTGCCAGAGATTTCTTCCAA 57.204 42.857 0.00 0.00 0.00 3.53
114 115 3.328931 AGAACTGCCAGAGATTTCTTCCA 59.671 43.478 0.00 0.00 0.00 3.53
115 116 3.949132 AGAACTGCCAGAGATTTCTTCC 58.051 45.455 0.00 0.00 0.00 3.46
116 117 5.390356 CGAAAGAACTGCCAGAGATTTCTTC 60.390 44.000 0.00 0.00 35.87 2.87
117 118 4.453819 CGAAAGAACTGCCAGAGATTTCTT 59.546 41.667 0.00 0.11 37.98 2.52
118 119 3.999663 CGAAAGAACTGCCAGAGATTTCT 59.000 43.478 0.00 0.00 0.00 2.52
119 120 3.126000 CCGAAAGAACTGCCAGAGATTTC 59.874 47.826 0.00 4.66 0.00 2.17
120 121 3.077359 CCGAAAGAACTGCCAGAGATTT 58.923 45.455 0.00 0.00 0.00 2.17
121 122 2.704572 CCGAAAGAACTGCCAGAGATT 58.295 47.619 0.00 0.00 0.00 2.40
122 123 1.677217 GCCGAAAGAACTGCCAGAGAT 60.677 52.381 0.00 0.00 0.00 2.75
123 124 0.320771 GCCGAAAGAACTGCCAGAGA 60.321 55.000 0.00 0.00 0.00 3.10
124 125 1.301677 GGCCGAAAGAACTGCCAGAG 61.302 60.000 0.00 0.00 43.46 3.35
125 126 1.302511 GGCCGAAAGAACTGCCAGA 60.303 57.895 0.00 0.00 43.46 3.86
126 127 1.301677 GAGGCCGAAAGAACTGCCAG 61.302 60.000 0.00 0.00 46.45 4.85
127 128 1.302511 GAGGCCGAAAGAACTGCCA 60.303 57.895 0.00 0.00 46.45 4.92
128 129 2.391389 CGAGGCCGAAAGAACTGCC 61.391 63.158 0.00 0.00 44.35 4.85
129 130 1.374252 TCGAGGCCGAAAGAACTGC 60.374 57.895 0.00 0.00 42.51 4.40
130 131 4.988065 TCGAGGCCGAAAGAACTG 57.012 55.556 0.00 0.00 42.51 3.16
158 159 3.625897 TCAGGCGACACCCACAGG 61.626 66.667 0.00 0.00 40.58 4.00
159 160 2.357517 GTCAGGCGACACCCACAG 60.358 66.667 0.00 0.00 42.13 3.66
160 161 3.936203 GGTCAGGCGACACCCACA 61.936 66.667 10.67 0.00 44.54 4.17
161 162 3.178540 AAGGTCAGGCGACACCCAC 62.179 63.158 10.67 0.00 44.54 4.61
162 163 2.847234 AAGGTCAGGCGACACCCA 60.847 61.111 10.67 0.00 44.54 4.51
163 164 2.047179 GAAGGTCAGGCGACACCC 60.047 66.667 10.67 0.00 44.54 4.61
164 165 2.047179 GGAAGGTCAGGCGACACC 60.047 66.667 10.67 0.00 44.54 4.16
165 166 1.374758 CAGGAAGGTCAGGCGACAC 60.375 63.158 10.67 0.00 44.54 3.67
166 167 1.118965 TTCAGGAAGGTCAGGCGACA 61.119 55.000 10.67 0.00 44.54 4.35
167 168 0.390472 CTTCAGGAAGGTCAGGCGAC 60.390 60.000 1.01 0.00 41.80 5.19
168 169 1.975327 CTTCAGGAAGGTCAGGCGA 59.025 57.895 1.01 0.00 34.87 5.54
169 170 4.606071 CTTCAGGAAGGTCAGGCG 57.394 61.111 1.01 0.00 34.87 5.52
465 466 3.952967 CGAACTAGCTAGTCCTAGGGTTT 59.047 47.826 26.21 7.74 39.27 3.27
466 467 3.553904 CGAACTAGCTAGTCCTAGGGTT 58.446 50.000 26.21 8.49 39.27 4.11
467 468 2.158638 CCGAACTAGCTAGTCCTAGGGT 60.159 54.545 26.21 9.27 39.27 4.34
468 469 2.506444 CCGAACTAGCTAGTCCTAGGG 58.494 57.143 26.21 17.61 39.27 3.53
469 470 2.506444 CCCGAACTAGCTAGTCCTAGG 58.494 57.143 26.21 22.87 39.27 3.02
470 471 1.881324 GCCCGAACTAGCTAGTCCTAG 59.119 57.143 26.21 16.16 40.47 3.02
471 472 1.213678 TGCCCGAACTAGCTAGTCCTA 59.786 52.381 26.21 7.80 34.99 2.94
472 473 0.033405 TGCCCGAACTAGCTAGTCCT 60.033 55.000 26.21 12.36 34.99 3.85
473 474 0.822164 TTGCCCGAACTAGCTAGTCC 59.178 55.000 26.21 13.89 34.99 3.85
474 475 1.203994 TGTTGCCCGAACTAGCTAGTC 59.796 52.381 26.21 17.51 34.99 2.59
475 476 1.204941 CTGTTGCCCGAACTAGCTAGT 59.795 52.381 20.95 20.95 38.39 2.57
476 477 1.927895 CTGTTGCCCGAACTAGCTAG 58.072 55.000 19.44 19.44 35.37 3.42
477 478 0.108329 GCTGTTGCCCGAACTAGCTA 60.108 55.000 0.00 0.00 36.53 3.32
478 479 1.376037 GCTGTTGCCCGAACTAGCT 60.376 57.895 0.00 0.00 36.53 3.32
479 480 2.740714 CGCTGTTGCCCGAACTAGC 61.741 63.158 0.00 0.00 36.31 3.42
480 481 1.080093 TCGCTGTTGCCCGAACTAG 60.080 57.895 0.00 0.00 35.37 2.57
481 482 1.373748 GTCGCTGTTGCCCGAACTA 60.374 57.895 0.00 0.00 35.37 2.24
482 483 2.665185 GTCGCTGTTGCCCGAACT 60.665 61.111 0.00 0.00 35.37 3.01
483 484 4.072088 CGTCGCTGTTGCCCGAAC 62.072 66.667 0.00 0.00 35.00 3.95
484 485 4.595538 ACGTCGCTGTTGCCCGAA 62.596 61.111 0.00 0.00 35.00 4.30
488 489 3.764049 GACGACGTCGCTGTTGCC 61.764 66.667 35.92 13.48 44.43 4.52
499 500 0.163360 AGAAAGAGACGACGACGACG 59.837 55.000 17.60 17.60 42.66 5.12
500 501 1.970608 CAAGAAAGAGACGACGACGAC 59.029 52.381 15.32 8.08 42.66 4.34
501 502 1.869132 TCAAGAAAGAGACGACGACGA 59.131 47.619 15.32 0.00 42.66 4.20
502 503 2.311450 TCAAGAAAGAGACGACGACG 57.689 50.000 5.58 5.58 45.75 5.12
503 504 2.981140 CCTTCAAGAAAGAGACGACGAC 59.019 50.000 0.00 0.00 37.12 4.34
504 505 2.621998 ACCTTCAAGAAAGAGACGACGA 59.378 45.455 0.00 0.00 37.12 4.20
505 506 2.726760 CACCTTCAAGAAAGAGACGACG 59.273 50.000 0.00 0.00 37.12 5.12
506 507 3.718815 ACACCTTCAAGAAAGAGACGAC 58.281 45.455 0.00 0.00 37.12 4.34
507 508 4.119862 CAACACCTTCAAGAAAGAGACGA 58.880 43.478 0.00 0.00 37.12 4.20
508 509 3.303395 GCAACACCTTCAAGAAAGAGACG 60.303 47.826 0.00 0.00 37.12 4.18
509 510 3.879892 AGCAACACCTTCAAGAAAGAGAC 59.120 43.478 0.00 0.00 37.12 3.36
510 511 4.156455 AGCAACACCTTCAAGAAAGAGA 57.844 40.909 0.00 0.00 37.12 3.10
511 512 4.498682 CCAAGCAACACCTTCAAGAAAGAG 60.499 45.833 0.00 0.00 37.12 2.85
512 513 3.381272 CCAAGCAACACCTTCAAGAAAGA 59.619 43.478 0.00 0.00 37.12 2.52
513 514 3.131046 ACCAAGCAACACCTTCAAGAAAG 59.869 43.478 0.00 0.00 34.52 2.62
514 515 3.096092 ACCAAGCAACACCTTCAAGAAA 58.904 40.909 0.00 0.00 0.00 2.52
515 516 2.733956 ACCAAGCAACACCTTCAAGAA 58.266 42.857 0.00 0.00 0.00 2.52
516 517 2.435372 ACCAAGCAACACCTTCAAGA 57.565 45.000 0.00 0.00 0.00 3.02
517 518 2.032030 CGTACCAAGCAACACCTTCAAG 60.032 50.000 0.00 0.00 0.00 3.02
518 519 1.944024 CGTACCAAGCAACACCTTCAA 59.056 47.619 0.00 0.00 0.00 2.69
519 520 1.588674 CGTACCAAGCAACACCTTCA 58.411 50.000 0.00 0.00 0.00 3.02
520 521 0.237498 GCGTACCAAGCAACACCTTC 59.763 55.000 0.00 0.00 34.19 3.46
521 522 1.503818 CGCGTACCAAGCAACACCTT 61.504 55.000 0.00 0.00 34.19 3.50
522 523 1.959226 CGCGTACCAAGCAACACCT 60.959 57.895 0.00 0.00 34.19 4.00
523 524 2.554272 CGCGTACCAAGCAACACC 59.446 61.111 0.00 0.00 34.19 4.16
524 525 2.554272 CCGCGTACCAAGCAACAC 59.446 61.111 4.92 0.00 34.19 3.32
525 526 3.350612 GCCGCGTACCAAGCAACA 61.351 61.111 4.92 0.00 34.19 3.33
526 527 4.439472 CGCCGCGTACCAAGCAAC 62.439 66.667 4.92 0.00 34.19 4.17
530 531 3.849953 GAAGCGCCGCGTACCAAG 61.850 66.667 15.34 0.00 0.00 3.61
542 543 3.997064 CTCCCAGCACTCCGAAGCG 62.997 68.421 0.00 0.00 35.48 4.68
543 544 2.125350 CTCCCAGCACTCCGAAGC 60.125 66.667 0.00 0.00 0.00 3.86
544 545 2.125350 GCTCCCAGCACTCCGAAG 60.125 66.667 0.00 0.00 41.89 3.79
545 546 4.069232 CGCTCCCAGCACTCCGAA 62.069 66.667 0.00 0.00 42.58 4.30
548 549 4.767255 CCACGCTCCCAGCACTCC 62.767 72.222 0.00 0.00 42.58 3.85
549 550 4.008933 ACCACGCTCCCAGCACTC 62.009 66.667 0.00 0.00 42.58 3.51
550 551 4.320456 CACCACGCTCCCAGCACT 62.320 66.667 0.00 0.00 42.58 4.40
553 554 3.702048 TACCACCACGCTCCCAGC 61.702 66.667 0.00 0.00 38.02 4.85
554 555 1.827399 AAGTACCACCACGCTCCCAG 61.827 60.000 0.00 0.00 0.00 4.45
555 556 1.823169 GAAGTACCACCACGCTCCCA 61.823 60.000 0.00 0.00 0.00 4.37
556 557 1.079336 GAAGTACCACCACGCTCCC 60.079 63.158 0.00 0.00 0.00 4.30
557 558 0.108756 GAGAAGTACCACCACGCTCC 60.109 60.000 0.00 0.00 0.00 4.70
558 559 0.889306 AGAGAAGTACCACCACGCTC 59.111 55.000 0.00 0.00 0.00 5.03
559 560 0.603569 CAGAGAAGTACCACCACGCT 59.396 55.000 0.00 0.00 0.00 5.07
560 561 0.389948 CCAGAGAAGTACCACCACGC 60.390 60.000 0.00 0.00 0.00 5.34
561 562 1.202582 CTCCAGAGAAGTACCACCACG 59.797 57.143 0.00 0.00 0.00 4.94
562 563 1.550976 CCTCCAGAGAAGTACCACCAC 59.449 57.143 0.00 0.00 0.00 4.16
563 564 1.552486 CCCTCCAGAGAAGTACCACCA 60.552 57.143 0.00 0.00 0.00 4.17
564 565 1.196012 CCCTCCAGAGAAGTACCACC 58.804 60.000 0.00 0.00 0.00 4.61
565 566 1.550976 CACCCTCCAGAGAAGTACCAC 59.449 57.143 0.00 0.00 0.00 4.16
566 567 1.938585 CACCCTCCAGAGAAGTACCA 58.061 55.000 0.00 0.00 0.00 3.25
567 568 0.537653 GCACCCTCCAGAGAAGTACC 59.462 60.000 0.00 0.00 0.00 3.34
568 569 1.205893 CTGCACCCTCCAGAGAAGTAC 59.794 57.143 0.00 0.00 32.03 2.73
569 570 1.561643 CTGCACCCTCCAGAGAAGTA 58.438 55.000 0.00 0.00 32.03 2.24
570 571 1.835927 GCTGCACCCTCCAGAGAAGT 61.836 60.000 0.00 0.00 32.03 3.01
571 572 1.078567 GCTGCACCCTCCAGAGAAG 60.079 63.158 0.00 0.00 32.03 2.85
572 573 2.947532 CGCTGCACCCTCCAGAGAA 61.948 63.158 0.00 0.00 32.75 2.87
573 574 3.385384 CGCTGCACCCTCCAGAGA 61.385 66.667 0.00 0.00 32.75 3.10
574 575 4.463879 CCGCTGCACCCTCCAGAG 62.464 72.222 0.00 0.00 32.03 3.35
576 577 4.767255 GACCGCTGCACCCTCCAG 62.767 72.222 0.00 0.00 0.00 3.86
591 592 3.886329 AACGAAGACGACCGGCGAC 62.886 63.158 22.10 16.53 44.57 5.19
592 593 3.599792 GAACGAAGACGACCGGCGA 62.600 63.158 22.10 0.00 44.57 5.54
594 595 3.170585 CGAACGAAGACGACCGGC 61.171 66.667 0.00 0.00 42.66 6.13
595 596 1.370900 AACGAACGAAGACGACCGG 60.371 57.895 0.00 0.00 42.66 5.28
596 597 0.658244 TCAACGAACGAAGACGACCG 60.658 55.000 0.14 0.00 42.66 4.79
597 598 1.647702 GATCAACGAACGAAGACGACC 59.352 52.381 0.14 0.00 42.66 4.79
598 599 2.338813 CAGATCAACGAACGAAGACGAC 59.661 50.000 0.14 0.00 42.66 4.34
599 600 2.581637 CAGATCAACGAACGAAGACGA 58.418 47.619 0.14 0.00 42.66 4.20
600 601 1.057847 GCAGATCAACGAACGAAGACG 59.942 52.381 0.14 0.00 45.75 4.18
601 602 1.390463 GGCAGATCAACGAACGAAGAC 59.610 52.381 0.14 0.00 0.00 3.01
602 603 1.000394 TGGCAGATCAACGAACGAAGA 60.000 47.619 0.14 0.00 0.00 2.87
603 604 1.428448 TGGCAGATCAACGAACGAAG 58.572 50.000 0.14 0.00 0.00 3.79
604 605 2.093306 ATGGCAGATCAACGAACGAA 57.907 45.000 0.14 0.00 0.00 3.85
605 606 1.731709 CAATGGCAGATCAACGAACGA 59.268 47.619 0.14 0.00 0.00 3.85
606 607 1.464608 ACAATGGCAGATCAACGAACG 59.535 47.619 0.00 0.00 0.00 3.95
607 608 3.236816 CAACAATGGCAGATCAACGAAC 58.763 45.455 0.00 0.00 0.00 3.95
608 609 2.351641 GCAACAATGGCAGATCAACGAA 60.352 45.455 0.00 0.00 0.00 3.85
609 610 1.199789 GCAACAATGGCAGATCAACGA 59.800 47.619 0.00 0.00 0.00 3.85
610 611 1.068402 TGCAACAATGGCAGATCAACG 60.068 47.619 0.00 0.00 36.11 4.10
611 612 2.728690 TGCAACAATGGCAGATCAAC 57.271 45.000 0.00 0.00 36.11 3.18
612 613 3.965379 AATGCAACAATGGCAGATCAA 57.035 38.095 0.00 0.00 45.68 2.57
613 614 4.018490 ACTAATGCAACAATGGCAGATCA 58.982 39.130 0.00 0.00 45.68 2.92
614 615 4.644103 ACTAATGCAACAATGGCAGATC 57.356 40.909 0.00 0.00 45.68 2.75
615 616 5.410355 AAACTAATGCAACAATGGCAGAT 57.590 34.783 0.00 0.00 45.68 2.90
616 617 4.870123 AAACTAATGCAACAATGGCAGA 57.130 36.364 0.00 0.00 45.68 4.26
617 618 5.697633 AGAAAAACTAATGCAACAATGGCAG 59.302 36.000 0.00 0.00 45.68 4.85
618 619 5.609423 AGAAAAACTAATGCAACAATGGCA 58.391 33.333 0.00 0.00 46.66 4.92
619 620 6.544038 AAGAAAAACTAATGCAACAATGGC 57.456 33.333 0.00 0.00 0.00 4.40
620 621 8.369218 AGAAAGAAAAACTAATGCAACAATGG 57.631 30.769 0.00 0.00 0.00 3.16
659 660 2.354259 CAGCACAAACAAGCCCAAAAA 58.646 42.857 0.00 0.00 0.00 1.94
660 661 2.011046 GCAGCACAAACAAGCCCAAAA 61.011 47.619 0.00 0.00 0.00 2.44
661 662 0.461693 GCAGCACAAACAAGCCCAAA 60.462 50.000 0.00 0.00 0.00 3.28
662 663 1.143620 GCAGCACAAACAAGCCCAA 59.856 52.632 0.00 0.00 0.00 4.12
663 664 2.813901 GCAGCACAAACAAGCCCA 59.186 55.556 0.00 0.00 0.00 5.36
664 665 2.355009 CGCAGCACAAACAAGCCC 60.355 61.111 0.00 0.00 0.00 5.19
665 666 2.355009 CCGCAGCACAAACAAGCC 60.355 61.111 0.00 0.00 0.00 4.35
666 667 3.032033 GCCGCAGCACAAACAAGC 61.032 61.111 0.00 0.00 39.53 4.01
667 668 2.355009 GGCCGCAGCACAAACAAG 60.355 61.111 0.00 0.00 42.56 3.16
668 669 2.832661 AGGCCGCAGCACAAACAA 60.833 55.556 0.00 0.00 42.56 2.83
669 670 3.286751 GAGGCCGCAGCACAAACA 61.287 61.111 0.00 0.00 42.56 2.83
670 671 3.259425 CTGAGGCCGCAGCACAAAC 62.259 63.158 24.15 0.00 42.56 2.93
671 672 2.979676 CTGAGGCCGCAGCACAAA 60.980 61.111 24.15 0.00 42.56 2.83
677 678 2.985512 GATAGGTGCTGAGGCCGCAG 62.986 65.000 30.15 30.15 38.19 5.18
678 679 3.083349 ATAGGTGCTGAGGCCGCA 61.083 61.111 9.48 9.48 37.74 5.69
679 680 2.280457 GATAGGTGCTGAGGCCGC 60.280 66.667 0.00 0.00 37.74 6.53
680 681 2.028190 CGATAGGTGCTGAGGCCG 59.972 66.667 0.00 0.00 37.74 6.13
681 682 1.522569 AACGATAGGTGCTGAGGCC 59.477 57.895 0.00 0.00 43.77 5.19
690 691 3.005472 CACCGATACATCCAACGATAGGT 59.995 47.826 0.00 0.00 43.77 3.08
691 692 3.575630 CACCGATACATCCAACGATAGG 58.424 50.000 0.00 0.00 43.77 2.57
692 693 3.005472 ACCACCGATACATCCAACGATAG 59.995 47.826 0.00 0.00 46.19 2.08
693 694 2.960384 ACCACCGATACATCCAACGATA 59.040 45.455 0.00 0.00 0.00 2.92
694 695 1.760613 ACCACCGATACATCCAACGAT 59.239 47.619 0.00 0.00 0.00 3.73
695 696 1.187974 ACCACCGATACATCCAACGA 58.812 50.000 0.00 0.00 0.00 3.85
696 697 1.663643 CAACCACCGATACATCCAACG 59.336 52.381 0.00 0.00 0.00 4.10
697 698 1.400494 GCAACCACCGATACATCCAAC 59.600 52.381 0.00 0.00 0.00 3.77
698 699 1.280710 AGCAACCACCGATACATCCAA 59.719 47.619 0.00 0.00 0.00 3.53
699 700 0.908910 AGCAACCACCGATACATCCA 59.091 50.000 0.00 0.00 0.00 3.41
700 701 2.038387 AAGCAACCACCGATACATCC 57.962 50.000 0.00 0.00 0.00 3.51
701 702 2.747446 ACAAAGCAACCACCGATACATC 59.253 45.455 0.00 0.00 0.00 3.06
702 703 2.790433 ACAAAGCAACCACCGATACAT 58.210 42.857 0.00 0.00 0.00 2.29
703 704 2.264005 ACAAAGCAACCACCGATACA 57.736 45.000 0.00 0.00 0.00 2.29
704 705 4.957759 ATTACAAAGCAACCACCGATAC 57.042 40.909 0.00 0.00 0.00 2.24
705 706 5.489249 TGTATTACAAAGCAACCACCGATA 58.511 37.500 0.00 0.00 0.00 2.92
706 707 4.328536 TGTATTACAAAGCAACCACCGAT 58.671 39.130 0.00 0.00 0.00 4.18
707 708 3.741249 TGTATTACAAAGCAACCACCGA 58.259 40.909 0.00 0.00 0.00 4.69
708 709 4.491234 TTGTATTACAAAGCAACCACCG 57.509 40.909 6.79 0.00 34.76 4.94
718 719 4.022155 GGTTTCCCCGCTTTGTATTACAAA 60.022 41.667 18.39 18.39 44.91 2.83
719 720 3.506844 GGTTTCCCCGCTTTGTATTACAA 59.493 43.478 5.14 5.14 36.11 2.41
720 721 3.083293 GGTTTCCCCGCTTTGTATTACA 58.917 45.455 0.00 0.00 0.00 2.41
721 722 2.424601 GGGTTTCCCCGCTTTGTATTAC 59.575 50.000 0.00 0.00 42.41 1.89
722 723 2.725637 GGGTTTCCCCGCTTTGTATTA 58.274 47.619 0.00 0.00 42.41 0.98
723 724 1.552578 GGGTTTCCCCGCTTTGTATT 58.447 50.000 0.00 0.00 42.41 1.89
724 725 3.276281 GGGTTTCCCCGCTTTGTAT 57.724 52.632 0.00 0.00 42.41 2.29
725 726 4.826248 GGGTTTCCCCGCTTTGTA 57.174 55.556 0.00 0.00 42.41 2.41
734 735 3.748083 ACTCTACGAAAAAGGGTTTCCC 58.252 45.455 0.00 0.00 45.90 3.97
735 736 7.326454 AGTATACTCTACGAAAAAGGGTTTCC 58.674 38.462 0.00 0.00 0.00 3.13
736 737 8.654215 CAAGTATACTCTACGAAAAAGGGTTTC 58.346 37.037 5.70 0.00 0.00 2.78
737 738 8.370182 TCAAGTATACTCTACGAAAAAGGGTTT 58.630 33.333 5.70 0.00 0.00 3.27
738 739 7.899973 TCAAGTATACTCTACGAAAAAGGGTT 58.100 34.615 5.70 0.00 0.00 4.11
739 740 7.363617 CCTCAAGTATACTCTACGAAAAAGGGT 60.364 40.741 5.70 0.00 0.00 4.34
740 741 6.979238 CCTCAAGTATACTCTACGAAAAAGGG 59.021 42.308 5.70 0.00 0.00 3.95
741 742 6.476053 GCCTCAAGTATACTCTACGAAAAAGG 59.524 42.308 5.70 4.45 0.00 3.11
742 743 7.259161 AGCCTCAAGTATACTCTACGAAAAAG 58.741 38.462 5.70 0.00 0.00 2.27
743 744 7.166691 AGCCTCAAGTATACTCTACGAAAAA 57.833 36.000 5.70 0.00 0.00 1.94
744 745 6.770746 AGCCTCAAGTATACTCTACGAAAA 57.229 37.500 5.70 0.00 0.00 2.29
745 746 7.501559 ACATAGCCTCAAGTATACTCTACGAAA 59.498 37.037 5.70 0.00 0.00 3.46
746 747 6.996879 ACATAGCCTCAAGTATACTCTACGAA 59.003 38.462 5.70 0.00 0.00 3.85
747 748 6.427242 CACATAGCCTCAAGTATACTCTACGA 59.573 42.308 5.70 0.46 0.00 3.43
748 749 6.427242 TCACATAGCCTCAAGTATACTCTACG 59.573 42.308 5.70 0.00 0.00 3.51
749 750 7.747155 TCACATAGCCTCAAGTATACTCTAC 57.253 40.000 5.70 0.00 0.00 2.59
750 751 8.797438 CAATCACATAGCCTCAAGTATACTCTA 58.203 37.037 5.70 3.41 0.00 2.43
751 752 7.288852 ACAATCACATAGCCTCAAGTATACTCT 59.711 37.037 5.70 1.05 0.00 3.24
849 850 3.642705 CTGCAGTGCCCTTTTTAAGAAC 58.357 45.455 13.72 0.00 0.00 3.01
918 924 3.363724 CGAGTGACGATTGACGAATGAAA 59.636 43.478 0.00 0.00 45.77 2.69
919 925 2.914838 CGAGTGACGATTGACGAATGAA 59.085 45.455 0.00 0.00 45.77 2.57
920 926 2.515912 CGAGTGACGATTGACGAATGA 58.484 47.619 0.00 0.00 45.77 2.57
921 927 1.007011 GCGAGTGACGATTGACGAATG 60.007 52.381 0.00 0.00 45.77 2.67
922 928 1.269166 GCGAGTGACGATTGACGAAT 58.731 50.000 0.00 0.00 45.77 3.34
923 929 0.039888 TGCGAGTGACGATTGACGAA 60.040 50.000 0.00 0.00 45.77 3.85
924 930 0.454452 CTGCGAGTGACGATTGACGA 60.454 55.000 0.00 0.00 45.77 4.20
925 931 1.983907 CTGCGAGTGACGATTGACG 59.016 57.895 0.00 0.00 45.77 4.35
926 932 1.704582 GCTGCGAGTGACGATTGAC 59.295 57.895 0.00 0.00 45.77 3.18
927 933 1.801512 CGCTGCGAGTGACGATTGA 60.802 57.895 18.66 0.00 45.77 2.57
928 934 2.002963 GACGCTGCGAGTGACGATTG 62.003 60.000 30.47 0.00 45.77 2.67
929 935 1.801913 GACGCTGCGAGTGACGATT 60.802 57.895 30.47 1.69 45.77 3.34
930 936 2.202492 GACGCTGCGAGTGACGAT 60.202 61.111 30.47 2.56 45.77 3.73
1542 2137 0.461339 ACGAGTAAATGGCCGCGATT 60.461 50.000 8.23 0.00 0.00 3.34
1548 2143 0.458669 TCTCCGACGAGTAAATGGCC 59.541 55.000 0.00 0.00 37.40 5.36
1733 2328 1.492176 AGGTATCCATTGGCAGACCTG 59.508 52.381 17.39 0.00 35.97 4.00
1905 2509 6.440647 TCTCTGAATTCAAGGGAAGTAGCTTA 59.559 38.462 9.88 0.00 36.25 3.09
1932 2536 1.484653 ACCATCGCTGTGTGCCTTATA 59.515 47.619 0.00 0.00 38.78 0.98
2220 2837 7.761249 GCAGCAAAAGAAACAGGTAATATGATT 59.239 33.333 0.00 0.00 0.00 2.57
2221 2838 7.123247 AGCAGCAAAAGAAACAGGTAATATGAT 59.877 33.333 0.00 0.00 0.00 2.45
2222 2839 6.434028 AGCAGCAAAAGAAACAGGTAATATGA 59.566 34.615 0.00 0.00 0.00 2.15
2223 2840 6.624423 AGCAGCAAAAGAAACAGGTAATATG 58.376 36.000 0.00 0.00 0.00 1.78
2224 2841 6.840780 AGCAGCAAAAGAAACAGGTAATAT 57.159 33.333 0.00 0.00 0.00 1.28
2225 2842 6.264292 TCAAGCAGCAAAAGAAACAGGTAATA 59.736 34.615 0.00 0.00 0.00 0.98
2226 2843 5.068987 TCAAGCAGCAAAAGAAACAGGTAAT 59.931 36.000 0.00 0.00 0.00 1.89
2227 2844 4.400884 TCAAGCAGCAAAAGAAACAGGTAA 59.599 37.500 0.00 0.00 0.00 2.85
2231 2848 5.045215 TCAATCAAGCAGCAAAAGAAACAG 58.955 37.500 0.00 0.00 0.00 3.16
2251 2868 9.020731 TCGCTATATATATGTTGAAGAGGTCAA 57.979 33.333 5.44 0.00 44.20 3.18
2270 2887 9.982291 GAAACATTACTGAACAAATTCGCTATA 57.018 29.630 0.00 0.00 37.69 1.31
2271 2888 8.730680 AGAAACATTACTGAACAAATTCGCTAT 58.269 29.630 0.00 0.00 37.69 2.97
2272 2889 8.015087 CAGAAACATTACTGAACAAATTCGCTA 58.985 33.333 0.00 0.00 37.69 4.26
2273 2890 6.857964 CAGAAACATTACTGAACAAATTCGCT 59.142 34.615 0.00 0.00 37.69 4.93
2286 3109 4.579869 AGCATCCGAACAGAAACATTACT 58.420 39.130 0.00 0.00 0.00 2.24
2290 3113 3.058016 CACAAGCATCCGAACAGAAACAT 60.058 43.478 0.00 0.00 0.00 2.71
2302 3125 1.818642 AAGCTCTCACACAAGCATCC 58.181 50.000 0.00 0.00 41.06 3.51
2315 3154 8.814038 AGTTCATAACCATCAAATAAAGCTCT 57.186 30.769 0.00 0.00 0.00 4.09
2334 3175 6.550938 TGTGAGTCCAGATCATAAGTTCAT 57.449 37.500 0.00 0.00 0.00 2.57
2335 3176 6.382282 AGATGTGAGTCCAGATCATAAGTTCA 59.618 38.462 0.00 0.00 43.33 3.18
2336 3177 6.700960 CAGATGTGAGTCCAGATCATAAGTTC 59.299 42.308 0.00 0.00 43.33 3.01
2337 3178 6.155910 ACAGATGTGAGTCCAGATCATAAGTT 59.844 38.462 0.00 0.00 43.33 2.66
2338 3179 5.660417 ACAGATGTGAGTCCAGATCATAAGT 59.340 40.000 0.00 0.00 43.33 2.24
2339 3180 6.159299 ACAGATGTGAGTCCAGATCATAAG 57.841 41.667 0.00 0.00 43.33 1.73
2340 3181 6.550938 AACAGATGTGAGTCCAGATCATAA 57.449 37.500 0.00 0.00 43.33 1.90
2341 3182 6.836007 AGTAACAGATGTGAGTCCAGATCATA 59.164 38.462 0.00 0.00 43.33 2.15
2352 3193 6.857956 ACTAGCTACAAGTAACAGATGTGAG 58.142 40.000 0.00 0.00 0.00 3.51
2367 3208 5.375283 AGGACACTATCAGACTAGCTACA 57.625 43.478 0.00 0.00 0.00 2.74
2375 3216 5.283457 AGGCATAAAGGACACTATCAGAC 57.717 43.478 0.00 0.00 0.00 3.51
2380 3221 8.052748 TGACATAAAAGGCATAAAGGACACTAT 58.947 33.333 0.00 0.00 0.00 2.12
2687 3539 6.924111 AGAATATTCCGATGCAGTTGTTTTT 58.076 32.000 11.92 0.00 0.00 1.94
2774 3627 9.480053 CAACTCACAAATGTAATCTGGAAAAAT 57.520 29.630 0.00 0.00 0.00 1.82
2800 3653 6.095440 AGGAGGCATCAACACAATATTTACAC 59.905 38.462 0.00 0.00 0.00 2.90
2939 3808 5.064558 CAGATGATAAGCTTTCCTGCTCAT 58.935 41.667 3.20 4.35 43.24 2.90
2975 3844 8.506168 AAGAACAGTTCAAAACTTCAGATACA 57.494 30.769 15.85 0.00 40.46 2.29
2988 3857 9.868277 ATACATGTTTTTGAAAGAACAGTTCAA 57.132 25.926 15.85 0.00 41.91 2.69
3081 6128 8.188139 GGTGAGAAACAGTTAAACAAAAGATCA 58.812 33.333 0.00 0.00 0.00 2.92
3082 6129 8.406297 AGGTGAGAAACAGTTAAACAAAAGATC 58.594 33.333 0.00 0.00 0.00 2.75
3091 6138 3.219281 GGCCAGGTGAGAAACAGTTAAA 58.781 45.455 0.00 0.00 0.00 1.52
3103 6150 1.067295 AATGAGAAGTGGCCAGGTGA 58.933 50.000 5.11 0.00 0.00 4.02
3122 6169 1.062581 AGAGCTGCTGAGGAAGGGATA 60.063 52.381 7.01 0.00 0.00 2.59
3199 6300 7.265599 AGAGCATATCTAGTAGAGGAGCTTA 57.734 40.000 18.43 2.48 36.10 3.09
3246 6549 2.276732 AACTGAAAGCAAGGCAGCTA 57.723 45.000 4.87 0.00 45.89 3.32
3290 6594 3.185880 ACCAGCACTACTAGAGGGAAA 57.814 47.619 0.00 0.00 0.00 3.13
3292 6596 2.921834 AACCAGCACTACTAGAGGGA 57.078 50.000 0.00 0.00 0.00 4.20
3381 6687 5.692204 CACCATTGTAATCTATGACCGAGTC 59.308 44.000 0.00 0.00 0.00 3.36
3398 6704 7.984391 TGCTATCACTTAACATAACACCATTG 58.016 34.615 0.00 0.00 0.00 2.82
3418 6732 9.412460 TGAAAAGGATGTATTTCATTCTGCTAT 57.588 29.630 0.00 0.00 41.19 2.97
3718 7079 4.520492 CCTTCCACAAATCTGCAGTACTTT 59.480 41.667 14.67 9.43 0.00 2.66
3724 7085 5.416952 AGAATAACCTTCCACAAATCTGCAG 59.583 40.000 7.63 7.63 0.00 4.41
3755 7116 7.361713 CCGAGACAATATTTAAGAAAACTGCCA 60.362 37.037 0.00 0.00 0.00 4.92
3840 7201 5.720371 AACTGCCACAAAGCATATACAAA 57.280 34.783 0.00 0.00 43.09 2.83
3841 7202 5.720371 AAACTGCCACAAAGCATATACAA 57.280 34.783 0.00 0.00 43.09 2.41
3842 7203 6.825944 TTAAACTGCCACAAAGCATATACA 57.174 33.333 0.00 0.00 43.09 2.29
3843 7204 8.702163 AAATTAAACTGCCACAAAGCATATAC 57.298 30.769 0.00 0.00 43.09 1.47


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.