Multiple sequence alignment - TraesCS6A01G054100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G054100 chr6A 100.000 3005 0 0 1 3005 28259568 28256564 0.000000e+00 5550.0
1 TraesCS6A01G054100 chr6A 84.236 1421 188 24 943 2342 28319286 28317881 0.000000e+00 1351.0
2 TraesCS6A01G054100 chr6A 82.494 834 126 12 1523 2342 28317297 28316470 0.000000e+00 713.0
3 TraesCS6A01G054100 chr6D 94.086 2570 118 18 463 3005 26817387 26814825 0.000000e+00 3873.0
4 TraesCS6A01G054100 chr6D 94.086 2570 118 18 463 3005 26861135 26858573 0.000000e+00 3873.0
5 TraesCS6A01G054100 chr6D 94.086 2570 118 18 463 3005 26897475 26894913 0.000000e+00 3873.0
6 TraesCS6A01G054100 chr6D 83.725 1745 230 28 636 2342 27033222 27031494 0.000000e+00 1600.0
7 TraesCS6A01G054100 chr6D 79.154 1655 278 38 683 2303 26515886 26517507 0.000000e+00 1083.0
8 TraesCS6A01G054100 chr6D 72.017 1190 253 52 1005 2139 26601545 26600381 2.280000e-71 279.0
9 TraesCS6A01G054100 chr6D 88.421 95 8 2 2840 2933 27848300 27848392 8.810000e-21 111.0
10 TraesCS6A01G054100 chr6D 88.462 52 4 2 2775 2825 292309121 292309071 8.990000e-06 62.1
11 TraesCS6A01G054100 chr6B 95.128 2381 98 13 636 3005 49239124 49236751 0.000000e+00 3738.0
12 TraesCS6A01G054100 chr6B 94.408 1663 70 6 1083 2730 49052913 49051259 0.000000e+00 2534.0
13 TraesCS6A01G054100 chr6B 96.625 1126 38 0 1058 2183 49551751 49552876 0.000000e+00 1869.0
14 TraesCS6A01G054100 chr6B 96.601 559 15 3 2448 3005 49552901 49553456 0.000000e+00 924.0
15 TraesCS6A01G054100 chr6B 87.619 315 26 10 617 919 49199855 49199542 1.330000e-93 353.0
16 TraesCS6A01G054100 chr6B 86.817 311 39 2 2032 2342 49235978 49235670 2.220000e-91 346.0
17 TraesCS6A01G054100 chr6B 92.735 234 11 4 2773 3005 48938524 48938296 1.730000e-87 333.0
18 TraesCS6A01G054100 chr6B 92.735 234 12 4 2773 3005 48981590 48981361 1.730000e-87 333.0
19 TraesCS6A01G054100 chr6B 91.880 234 10 6 2773 3005 48874198 48873973 4.830000e-83 318.0
20 TraesCS6A01G054100 chr6B 80.779 385 46 16 636 997 49236374 49235995 2.950000e-70 276.0
21 TraesCS6A01G054100 chr6B 83.062 307 38 8 643 937 49066986 49066682 1.780000e-67 267.0
22 TraesCS6A01G054100 chr6B 93.056 144 9 1 943 1086 49066643 49066501 3.040000e-50 209.0
23 TraesCS6A01G054100 chr6B 94.737 76 3 1 943 1018 49551667 49551741 1.890000e-22 117.0
24 TraesCS6A01G054100 chr5B 91.650 491 14 3 1 468 507811261 507811747 0.000000e+00 654.0
25 TraesCS6A01G054100 chr7D 91.002 489 17 7 1 466 27546053 27545569 4.230000e-178 634.0
26 TraesCS6A01G054100 chr7D 89.959 488 18 8 1 465 548151587 548151108 4.290000e-168 601.0
27 TraesCS6A01G054100 chr7D 88.187 491 28 9 1 466 613228829 613229314 2.620000e-155 558.0
28 TraesCS6A01G054100 chr3A 90.408 490 18 9 1 467 711531804 711532287 4.260000e-173 617.0
29 TraesCS6A01G054100 chr2B 90.164 488 21 5 1 465 439363549 439364032 7.120000e-171 610.0
30 TraesCS6A01G054100 chr2D 88.140 430 30 9 41 466 118519555 118519967 2.690000e-135 492.0
31 TraesCS6A01G054100 chr2D 87.140 451 28 10 41 466 118466889 118467334 4.500000e-133 484.0
32 TraesCS6A01G054100 chr2A 93.464 306 16 2 160 465 702387938 702388239 4.570000e-123 451.0
33 TraesCS6A01G054100 chr2A 89.796 147 12 3 1 145 702360318 702360463 5.120000e-43 185.0
34 TraesCS6A01G054100 chr3D 89.181 342 13 7 2 319 410418877 410418536 3.610000e-109 405.0
35 TraesCS6A01G054100 chr5D 84.483 58 8 1 1502 1559 553759034 553759090 4.180000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G054100 chr6A 28256564 28259568 3004 True 5550.000000 5550 100.000000 1 3005 1 chr6A.!!$R1 3004
1 TraesCS6A01G054100 chr6A 28316470 28319286 2816 True 1032.000000 1351 83.365000 943 2342 2 chr6A.!!$R2 1399
2 TraesCS6A01G054100 chr6D 26814825 26817387 2562 True 3873.000000 3873 94.086000 463 3005 1 chr6D.!!$R2 2542
3 TraesCS6A01G054100 chr6D 26858573 26861135 2562 True 3873.000000 3873 94.086000 463 3005 1 chr6D.!!$R3 2542
4 TraesCS6A01G054100 chr6D 26894913 26897475 2562 True 3873.000000 3873 94.086000 463 3005 1 chr6D.!!$R4 2542
5 TraesCS6A01G054100 chr6D 27031494 27033222 1728 True 1600.000000 1600 83.725000 636 2342 1 chr6D.!!$R5 1706
6 TraesCS6A01G054100 chr6D 26515886 26517507 1621 False 1083.000000 1083 79.154000 683 2303 1 chr6D.!!$F1 1620
7 TraesCS6A01G054100 chr6D 26600381 26601545 1164 True 279.000000 279 72.017000 1005 2139 1 chr6D.!!$R1 1134
8 TraesCS6A01G054100 chr6B 49051259 49052913 1654 True 2534.000000 2534 94.408000 1083 2730 1 chr6B.!!$R4 1647
9 TraesCS6A01G054100 chr6B 49235670 49239124 3454 True 1453.333333 3738 87.574667 636 3005 3 chr6B.!!$R7 2369
10 TraesCS6A01G054100 chr6B 49551667 49553456 1789 False 970.000000 1869 95.987667 943 3005 3 chr6B.!!$F1 2062

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
945 970 0.028770 TTCACGTCAAAGCAAAGCCG 59.971 50.0 0.0 0.0 0.00 5.52 F
1368 1430 0.611062 TCTCCACCTTCGGATGTCGT 60.611 55.0 0.0 0.0 40.32 4.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1869 1987 1.348036 AGAGAGAGAAAACCCAACCCG 59.652 52.381 0.0 0.0 0.00 5.28 R
2563 3184 1.368641 GCATACGAAGGCATGTGTGA 58.631 50.000 0.0 0.0 31.14 3.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 2.660189 GGTTCTTATTCACCGACGGA 57.340 50.000 23.38 0.00 0.00 4.69
26 27 2.265683 GGTTCTTATTCACCGACGGAC 58.734 52.381 23.38 4.31 0.00 4.79
27 28 1.916000 GTTCTTATTCACCGACGGACG 59.084 52.381 23.38 11.41 42.18 4.79
40 41 4.057428 GGACGGAGCTGCGTCAGT 62.057 66.667 46.01 23.63 36.91 3.41
41 42 2.697761 GGACGGAGCTGCGTCAGTA 61.698 63.158 46.01 0.00 36.91 2.74
42 43 1.226435 GACGGAGCTGCGTCAGTAG 60.226 63.158 43.35 13.60 35.46 2.57
43 44 2.103143 CGGAGCTGCGTCAGTAGG 59.897 66.667 20.53 0.00 33.43 3.18
44 45 2.701780 CGGAGCTGCGTCAGTAGGT 61.702 63.158 20.53 0.00 43.29 3.08
45 46 1.374343 CGGAGCTGCGTCAGTAGGTA 61.374 60.000 20.53 0.00 40.78 3.08
46 47 1.033574 GGAGCTGCGTCAGTAGGTAT 58.966 55.000 0.00 0.00 40.78 2.73
47 48 1.269309 GGAGCTGCGTCAGTAGGTATG 60.269 57.143 0.00 0.00 40.78 2.39
48 49 1.676529 GAGCTGCGTCAGTAGGTATGA 59.323 52.381 0.00 0.00 40.78 2.15
49 50 2.294791 GAGCTGCGTCAGTAGGTATGAT 59.705 50.000 0.00 0.00 40.78 2.45
50 51 2.695666 AGCTGCGTCAGTAGGTATGATT 59.304 45.455 8.32 0.00 38.98 2.57
51 52 3.053455 GCTGCGTCAGTAGGTATGATTC 58.947 50.000 8.32 0.00 33.43 2.52
52 53 3.243569 GCTGCGTCAGTAGGTATGATTCT 60.244 47.826 8.32 0.00 33.43 2.40
53 54 4.294232 CTGCGTCAGTAGGTATGATTCTG 58.706 47.826 0.00 0.00 0.00 3.02
54 55 3.053455 GCGTCAGTAGGTATGATTCTGC 58.947 50.000 0.00 0.00 0.00 4.26
55 56 3.300857 CGTCAGTAGGTATGATTCTGCG 58.699 50.000 0.00 0.00 0.00 5.18
56 57 3.243101 CGTCAGTAGGTATGATTCTGCGT 60.243 47.826 0.00 0.00 0.00 5.24
57 58 4.291783 GTCAGTAGGTATGATTCTGCGTC 58.708 47.826 0.00 0.00 0.00 5.19
58 59 3.003378 TCAGTAGGTATGATTCTGCGTCG 59.997 47.826 0.00 0.00 0.00 5.12
59 60 2.950309 AGTAGGTATGATTCTGCGTCGT 59.050 45.455 0.00 0.00 0.00 4.34
60 61 4.024302 CAGTAGGTATGATTCTGCGTCGTA 60.024 45.833 0.00 0.00 0.00 3.43
61 62 4.577693 AGTAGGTATGATTCTGCGTCGTAA 59.422 41.667 0.00 0.00 0.00 3.18
62 63 4.585955 AGGTATGATTCTGCGTCGTAAT 57.414 40.909 0.00 0.00 0.00 1.89
63 64 4.299155 AGGTATGATTCTGCGTCGTAATG 58.701 43.478 0.00 0.00 0.00 1.90
64 65 4.037565 AGGTATGATTCTGCGTCGTAATGA 59.962 41.667 0.00 0.00 0.00 2.57
65 66 4.923871 GGTATGATTCTGCGTCGTAATGAT 59.076 41.667 0.00 0.00 0.00 2.45
66 67 4.979564 ATGATTCTGCGTCGTAATGATG 57.020 40.909 0.00 0.00 36.63 3.07
67 68 3.123050 TGATTCTGCGTCGTAATGATGG 58.877 45.455 0.00 0.00 33.96 3.51
68 69 1.286501 TTCTGCGTCGTAATGATGGC 58.713 50.000 0.00 0.00 33.96 4.40
69 70 0.174617 TCTGCGTCGTAATGATGGCA 59.825 50.000 0.00 0.00 36.79 4.92
70 71 0.578683 CTGCGTCGTAATGATGGCAG 59.421 55.000 0.00 8.67 44.82 4.85
71 72 0.108377 TGCGTCGTAATGATGGCAGT 60.108 50.000 0.00 0.00 35.00 4.40
72 73 0.301687 GCGTCGTAATGATGGCAGTG 59.698 55.000 0.00 0.00 33.96 3.66
73 74 1.640428 CGTCGTAATGATGGCAGTGT 58.360 50.000 0.00 0.00 0.00 3.55
74 75 1.324435 CGTCGTAATGATGGCAGTGTG 59.676 52.381 0.00 0.00 0.00 3.82
75 76 1.665679 GTCGTAATGATGGCAGTGTGG 59.334 52.381 0.00 0.00 0.00 4.17
76 77 1.277842 TCGTAATGATGGCAGTGTGGT 59.722 47.619 0.00 0.00 0.00 4.16
77 78 1.398041 CGTAATGATGGCAGTGTGGTG 59.602 52.381 0.00 0.00 0.00 4.17
78 79 2.436417 GTAATGATGGCAGTGTGGTGT 58.564 47.619 0.00 0.00 0.00 4.16
79 80 1.999648 AATGATGGCAGTGTGGTGTT 58.000 45.000 0.00 0.00 0.00 3.32
80 81 1.538047 ATGATGGCAGTGTGGTGTTC 58.462 50.000 0.00 0.00 0.00 3.18
81 82 0.182299 TGATGGCAGTGTGGTGTTCA 59.818 50.000 0.00 0.00 0.00 3.18
82 83 0.593128 GATGGCAGTGTGGTGTTCAC 59.407 55.000 0.00 0.00 46.23 3.18
83 84 0.823356 ATGGCAGTGTGGTGTTCACC 60.823 55.000 14.31 14.31 45.48 4.02
84 85 2.542907 GGCAGTGTGGTGTTCACCG 61.543 63.158 15.82 3.97 45.48 4.94
85 86 3.022287 CAGTGTGGTGTTCACCGC 58.978 61.111 23.48 23.48 45.48 5.68
86 87 1.523711 CAGTGTGGTGTTCACCGCT 60.524 57.895 27.93 17.63 45.48 5.52
87 88 1.095228 CAGTGTGGTGTTCACCGCTT 61.095 55.000 27.93 17.45 45.48 4.68
88 89 0.466543 AGTGTGGTGTTCACCGCTTA 59.533 50.000 27.93 12.55 45.48 3.09
89 90 0.584876 GTGTGGTGTTCACCGCTTAC 59.415 55.000 27.93 18.64 45.48 2.34
90 91 0.533308 TGTGGTGTTCACCGCTTACC 60.533 55.000 27.93 4.84 45.48 2.85
91 92 1.301087 TGGTGTTCACCGCTTACCG 60.301 57.895 15.82 0.00 34.16 4.02
107 108 7.543127 CGCTTACCGGTATATTTTTAATTGC 57.457 36.000 16.67 0.00 0.00 3.56
108 109 7.357303 CGCTTACCGGTATATTTTTAATTGCT 58.643 34.615 16.67 0.00 0.00 3.91
109 110 7.858879 CGCTTACCGGTATATTTTTAATTGCTT 59.141 33.333 16.67 0.00 0.00 3.91
114 115 8.856103 ACCGGTATATTTTTAATTGCTTATGCT 58.144 29.630 4.49 0.00 40.48 3.79
115 116 9.691362 CCGGTATATTTTTAATTGCTTATGCTT 57.309 29.630 0.00 0.00 40.48 3.91
121 122 7.903995 TTTTTAATTGCTTATGCTTTGGAGG 57.096 32.000 1.96 0.00 40.48 4.30
122 123 3.531934 AATTGCTTATGCTTTGGAGGC 57.468 42.857 1.96 0.00 40.48 4.70
123 124 0.810648 TTGCTTATGCTTTGGAGGCG 59.189 50.000 1.96 0.00 40.48 5.52
124 125 1.031571 TGCTTATGCTTTGGAGGCGG 61.032 55.000 1.96 0.00 40.48 6.13
125 126 0.748005 GCTTATGCTTTGGAGGCGGA 60.748 55.000 0.00 0.00 36.03 5.54
126 127 1.303309 CTTATGCTTTGGAGGCGGAG 58.697 55.000 0.00 0.00 0.00 4.63
127 128 0.908910 TTATGCTTTGGAGGCGGAGA 59.091 50.000 0.00 0.00 0.00 3.71
128 129 1.131638 TATGCTTTGGAGGCGGAGAT 58.868 50.000 0.00 0.00 0.00 2.75
129 130 0.257039 ATGCTTTGGAGGCGGAGATT 59.743 50.000 0.00 0.00 0.00 2.40
130 131 0.392998 TGCTTTGGAGGCGGAGATTC 60.393 55.000 0.00 0.00 0.00 2.52
131 132 0.392998 GCTTTGGAGGCGGAGATTCA 60.393 55.000 0.00 0.00 0.00 2.57
132 133 1.373570 CTTTGGAGGCGGAGATTCAC 58.626 55.000 0.00 0.00 0.00 3.18
133 134 0.391130 TTTGGAGGCGGAGATTCACG 60.391 55.000 0.00 0.00 0.00 4.35
154 155 2.277969 CACTAATGCAGCACTCAGAGG 58.722 52.381 0.00 0.00 0.00 3.69
155 156 1.209019 ACTAATGCAGCACTCAGAGGG 59.791 52.381 0.00 0.00 0.00 4.30
156 157 1.209019 CTAATGCAGCACTCAGAGGGT 59.791 52.381 0.00 0.00 0.00 4.34
157 158 0.403271 AATGCAGCACTCAGAGGGTT 59.597 50.000 0.00 0.00 0.00 4.11
158 159 0.035630 ATGCAGCACTCAGAGGGTTC 60.036 55.000 0.00 0.00 0.00 3.62
159 160 1.123861 TGCAGCACTCAGAGGGTTCT 61.124 55.000 0.44 0.00 0.00 3.01
160 161 0.898320 GCAGCACTCAGAGGGTTCTA 59.102 55.000 0.44 0.00 30.73 2.10
161 162 1.484240 GCAGCACTCAGAGGGTTCTAT 59.516 52.381 0.44 0.00 30.73 1.98
162 163 2.093235 GCAGCACTCAGAGGGTTCTATT 60.093 50.000 0.44 0.00 30.73 1.73
163 164 3.529533 CAGCACTCAGAGGGTTCTATTG 58.470 50.000 0.44 0.00 30.73 1.90
164 165 3.055530 CAGCACTCAGAGGGTTCTATTGT 60.056 47.826 0.44 0.00 30.73 2.71
165 166 3.584848 AGCACTCAGAGGGTTCTATTGTT 59.415 43.478 0.44 0.00 30.73 2.83
166 167 3.686726 GCACTCAGAGGGTTCTATTGTTG 59.313 47.826 0.44 0.00 30.73 3.33
167 168 4.804261 GCACTCAGAGGGTTCTATTGTTGT 60.804 45.833 0.44 0.00 30.73 3.32
168 169 5.308825 CACTCAGAGGGTTCTATTGTTGTT 58.691 41.667 1.53 0.00 30.73 2.83
169 170 5.409826 CACTCAGAGGGTTCTATTGTTGTTC 59.590 44.000 1.53 0.00 30.73 3.18
170 171 5.071788 ACTCAGAGGGTTCTATTGTTGTTCA 59.928 40.000 1.53 0.00 30.73 3.18
171 172 5.551233 TCAGAGGGTTCTATTGTTGTTCAG 58.449 41.667 0.00 0.00 30.73 3.02
172 173 5.071788 TCAGAGGGTTCTATTGTTGTTCAGT 59.928 40.000 0.00 0.00 30.73 3.41
173 174 5.409826 CAGAGGGTTCTATTGTTGTTCAGTC 59.590 44.000 0.00 0.00 30.73 3.51
174 175 4.652822 AGGGTTCTATTGTTGTTCAGTCC 58.347 43.478 0.00 0.00 0.00 3.85
175 176 3.435671 GGGTTCTATTGTTGTTCAGTCCG 59.564 47.826 0.00 0.00 0.00 4.79
176 177 4.312443 GGTTCTATTGTTGTTCAGTCCGA 58.688 43.478 0.00 0.00 0.00 4.55
177 178 4.151867 GGTTCTATTGTTGTTCAGTCCGAC 59.848 45.833 0.00 0.00 0.00 4.79
178 179 4.866508 TCTATTGTTGTTCAGTCCGACT 57.133 40.909 0.00 0.00 0.00 4.18
179 180 4.806330 TCTATTGTTGTTCAGTCCGACTC 58.194 43.478 0.00 0.00 0.00 3.36
180 181 3.753294 ATTGTTGTTCAGTCCGACTCT 57.247 42.857 0.00 0.00 0.00 3.24
181 182 3.536956 TTGTTGTTCAGTCCGACTCTT 57.463 42.857 0.00 0.00 0.00 2.85
182 183 3.093717 TGTTGTTCAGTCCGACTCTTC 57.906 47.619 0.00 0.00 0.00 2.87
183 184 2.693591 TGTTGTTCAGTCCGACTCTTCT 59.306 45.455 0.00 0.00 0.00 2.85
184 185 3.053455 GTTGTTCAGTCCGACTCTTCTG 58.947 50.000 0.00 0.00 0.00 3.02
185 186 2.583143 TGTTCAGTCCGACTCTTCTGA 58.417 47.619 0.00 0.00 35.54 3.27
186 187 2.956333 TGTTCAGTCCGACTCTTCTGAA 59.044 45.455 0.00 0.00 42.21 3.02
187 188 3.004839 TGTTCAGTCCGACTCTTCTGAAG 59.995 47.826 11.18 11.18 44.08 3.02
188 189 1.542030 TCAGTCCGACTCTTCTGAAGC 59.458 52.381 12.54 0.00 34.61 3.86
189 190 1.270826 CAGTCCGACTCTTCTGAAGCA 59.729 52.381 12.54 1.56 0.00 3.91
190 191 2.094286 CAGTCCGACTCTTCTGAAGCAT 60.094 50.000 12.54 2.91 0.00 3.79
191 192 2.564947 AGTCCGACTCTTCTGAAGCATT 59.435 45.455 12.54 0.00 0.00 3.56
192 193 2.670414 GTCCGACTCTTCTGAAGCATTG 59.330 50.000 12.54 6.74 0.00 2.82
193 194 2.300152 TCCGACTCTTCTGAAGCATTGT 59.700 45.455 12.54 8.34 0.00 2.71
194 195 2.670414 CCGACTCTTCTGAAGCATTGTC 59.330 50.000 12.54 14.52 0.00 3.18
195 196 3.320626 CGACTCTTCTGAAGCATTGTCA 58.679 45.455 12.54 0.00 0.00 3.58
196 197 3.931468 CGACTCTTCTGAAGCATTGTCAT 59.069 43.478 12.54 0.00 0.00 3.06
197 198 4.201695 CGACTCTTCTGAAGCATTGTCATG 60.202 45.833 12.54 0.00 0.00 3.07
198 199 4.649692 ACTCTTCTGAAGCATTGTCATGT 58.350 39.130 12.54 0.00 32.28 3.21
199 200 4.694509 ACTCTTCTGAAGCATTGTCATGTC 59.305 41.667 12.54 0.00 32.28 3.06
200 201 4.903054 TCTTCTGAAGCATTGTCATGTCT 58.097 39.130 12.54 0.00 32.28 3.41
201 202 5.311265 TCTTCTGAAGCATTGTCATGTCTT 58.689 37.500 12.54 0.00 32.62 3.01
202 203 5.766670 TCTTCTGAAGCATTGTCATGTCTTT 59.233 36.000 12.54 0.00 31.10 2.52
203 204 5.618056 TCTGAAGCATTGTCATGTCTTTC 57.382 39.130 0.00 0.00 31.10 2.62
204 205 4.456911 TCTGAAGCATTGTCATGTCTTTCC 59.543 41.667 0.00 0.00 31.10 3.13
205 206 3.189080 TGAAGCATTGTCATGTCTTTCCG 59.811 43.478 0.00 0.00 31.10 4.30
206 207 3.057969 AGCATTGTCATGTCTTTCCGA 57.942 42.857 0.00 0.00 32.28 4.55
207 208 3.614092 AGCATTGTCATGTCTTTCCGAT 58.386 40.909 0.00 0.00 32.28 4.18
208 209 4.012374 AGCATTGTCATGTCTTTCCGATT 58.988 39.130 0.00 0.00 32.28 3.34
209 210 4.095483 AGCATTGTCATGTCTTTCCGATTC 59.905 41.667 0.00 0.00 32.28 2.52
210 211 4.095483 GCATTGTCATGTCTTTCCGATTCT 59.905 41.667 0.00 0.00 32.28 2.40
211 212 5.294306 GCATTGTCATGTCTTTCCGATTCTA 59.706 40.000 0.00 0.00 32.28 2.10
212 213 6.510799 GCATTGTCATGTCTTTCCGATTCTAG 60.511 42.308 0.00 0.00 32.28 2.43
213 214 5.914898 TGTCATGTCTTTCCGATTCTAGA 57.085 39.130 0.00 0.00 0.00 2.43
214 215 5.651530 TGTCATGTCTTTCCGATTCTAGAC 58.348 41.667 0.00 0.00 37.97 2.59
215 216 5.419155 TGTCATGTCTTTCCGATTCTAGACT 59.581 40.000 0.00 0.00 38.23 3.24
216 217 6.602009 TGTCATGTCTTTCCGATTCTAGACTA 59.398 38.462 0.00 0.00 38.23 2.59
217 218 7.122204 TGTCATGTCTTTCCGATTCTAGACTAA 59.878 37.037 0.00 0.00 38.23 2.24
218 219 7.646130 GTCATGTCTTTCCGATTCTAGACTAAG 59.354 40.741 0.00 0.00 38.23 2.18
219 220 5.892568 TGTCTTTCCGATTCTAGACTAAGC 58.107 41.667 0.00 0.00 38.23 3.09
220 221 5.417894 TGTCTTTCCGATTCTAGACTAAGCA 59.582 40.000 0.00 0.00 38.23 3.91
221 222 5.974751 GTCTTTCCGATTCTAGACTAAGCAG 59.025 44.000 0.00 0.00 35.33 4.24
222 223 4.920640 TTCCGATTCTAGACTAAGCAGG 57.079 45.455 0.00 0.00 0.00 4.85
223 224 3.899726 TCCGATTCTAGACTAAGCAGGT 58.100 45.455 0.00 0.00 0.00 4.00
224 225 3.884091 TCCGATTCTAGACTAAGCAGGTC 59.116 47.826 0.00 0.00 0.00 3.85
225 226 3.632604 CCGATTCTAGACTAAGCAGGTCA 59.367 47.826 0.00 0.00 36.29 4.02
226 227 4.261405 CCGATTCTAGACTAAGCAGGTCAG 60.261 50.000 0.00 3.20 36.29 3.51
227 228 4.616953 GATTCTAGACTAAGCAGGTCAGC 58.383 47.826 0.00 0.00 36.29 4.26
228 229 3.087370 TCTAGACTAAGCAGGTCAGCA 57.913 47.619 0.00 0.00 36.29 4.41
229 230 3.636679 TCTAGACTAAGCAGGTCAGCAT 58.363 45.455 0.00 0.00 36.29 3.79
230 231 4.793201 TCTAGACTAAGCAGGTCAGCATA 58.207 43.478 0.00 0.00 36.29 3.14
231 232 5.389520 TCTAGACTAAGCAGGTCAGCATAT 58.610 41.667 0.00 0.00 36.29 1.78
232 233 4.333913 AGACTAAGCAGGTCAGCATATG 57.666 45.455 0.00 0.00 36.29 1.78
233 234 3.070734 AGACTAAGCAGGTCAGCATATGG 59.929 47.826 4.56 0.00 36.29 2.74
234 235 3.041211 ACTAAGCAGGTCAGCATATGGA 58.959 45.455 4.56 0.00 36.85 3.41
235 236 2.338577 AAGCAGGTCAGCATATGGAC 57.661 50.000 4.56 4.29 36.85 4.02
236 237 1.206878 AGCAGGTCAGCATATGGACA 58.793 50.000 4.56 0.00 35.74 4.02
237 238 1.134280 AGCAGGTCAGCATATGGACAC 60.134 52.381 4.56 0.00 35.74 3.67
238 239 1.134280 GCAGGTCAGCATATGGACACT 60.134 52.381 4.56 1.97 35.74 3.55
239 240 2.681976 GCAGGTCAGCATATGGACACTT 60.682 50.000 4.56 0.00 35.74 3.16
240 241 3.432186 GCAGGTCAGCATATGGACACTTA 60.432 47.826 4.56 0.00 35.74 2.24
241 242 4.375272 CAGGTCAGCATATGGACACTTAG 58.625 47.826 4.56 0.00 35.74 2.18
242 243 4.033709 AGGTCAGCATATGGACACTTAGT 58.966 43.478 4.56 0.00 35.74 2.24
243 244 4.471386 AGGTCAGCATATGGACACTTAGTT 59.529 41.667 4.56 0.00 35.74 2.24
244 245 4.572389 GGTCAGCATATGGACACTTAGTTG 59.428 45.833 4.56 0.00 35.74 3.16
245 246 4.034510 GTCAGCATATGGACACTTAGTTGC 59.965 45.833 4.56 0.00 34.22 4.17
246 247 3.940852 CAGCATATGGACACTTAGTTGCA 59.059 43.478 4.56 0.00 0.00 4.08
247 248 4.034858 CAGCATATGGACACTTAGTTGCAG 59.965 45.833 4.56 0.00 0.00 4.41
248 249 4.080919 AGCATATGGACACTTAGTTGCAGA 60.081 41.667 4.56 0.00 0.00 4.26
249 250 4.272018 GCATATGGACACTTAGTTGCAGAG 59.728 45.833 4.56 0.00 0.00 3.35
250 251 5.664457 CATATGGACACTTAGTTGCAGAGA 58.336 41.667 0.00 0.00 0.00 3.10
251 252 4.833478 ATGGACACTTAGTTGCAGAGAT 57.167 40.909 0.00 0.00 0.00 2.75
252 253 5.939764 ATGGACACTTAGTTGCAGAGATA 57.060 39.130 0.00 0.00 0.00 1.98
253 254 5.738619 TGGACACTTAGTTGCAGAGATAA 57.261 39.130 0.00 0.00 0.00 1.75
254 255 6.109156 TGGACACTTAGTTGCAGAGATAAA 57.891 37.500 0.00 0.00 0.00 1.40
255 256 6.530120 TGGACACTTAGTTGCAGAGATAAAA 58.470 36.000 0.00 0.00 0.00 1.52
256 257 6.650807 TGGACACTTAGTTGCAGAGATAAAAG 59.349 38.462 0.00 0.00 0.00 2.27
257 258 6.402658 GGACACTTAGTTGCAGAGATAAAAGC 60.403 42.308 0.00 0.00 0.00 3.51
258 259 5.997746 ACACTTAGTTGCAGAGATAAAAGCA 59.002 36.000 0.00 0.00 34.79 3.91
259 260 6.073003 ACACTTAGTTGCAGAGATAAAAGCAC 60.073 38.462 0.00 0.00 36.62 4.40
260 261 5.997746 ACTTAGTTGCAGAGATAAAAGCACA 59.002 36.000 0.00 0.00 36.62 4.57
261 262 4.756084 AGTTGCAGAGATAAAAGCACAC 57.244 40.909 0.00 0.00 36.62 3.82
262 263 4.136796 AGTTGCAGAGATAAAAGCACACA 58.863 39.130 0.00 0.00 36.62 3.72
263 264 4.763793 AGTTGCAGAGATAAAAGCACACAT 59.236 37.500 0.00 0.00 36.62 3.21
264 265 4.690184 TGCAGAGATAAAAGCACACATG 57.310 40.909 0.00 0.00 31.05 3.21
275 276 3.778619 CACACATGCTTATCCGGGA 57.221 52.632 0.00 0.00 0.00 5.14
276 277 1.586422 CACACATGCTTATCCGGGAG 58.414 55.000 0.00 0.00 0.00 4.30
277 278 1.134401 CACACATGCTTATCCGGGAGT 60.134 52.381 0.00 0.00 0.00 3.85
278 279 1.559682 ACACATGCTTATCCGGGAGTT 59.440 47.619 0.00 0.00 0.00 3.01
279 280 2.026262 ACACATGCTTATCCGGGAGTTT 60.026 45.455 0.00 0.00 0.00 2.66
280 281 2.355756 CACATGCTTATCCGGGAGTTTG 59.644 50.000 0.00 2.92 0.00 2.93
281 282 2.026262 ACATGCTTATCCGGGAGTTTGT 60.026 45.455 0.00 3.51 0.00 2.83
282 283 2.871096 TGCTTATCCGGGAGTTTGTT 57.129 45.000 0.00 0.00 0.00 2.83
283 284 2.706890 TGCTTATCCGGGAGTTTGTTC 58.293 47.619 0.00 0.00 0.00 3.18
284 285 2.304761 TGCTTATCCGGGAGTTTGTTCT 59.695 45.455 0.00 0.00 0.00 3.01
285 286 2.937149 GCTTATCCGGGAGTTTGTTCTC 59.063 50.000 0.00 0.00 0.00 2.87
296 297 5.599359 GAGTTTGTTCTCCAGAAGCTTAC 57.401 43.478 0.00 0.00 34.27 2.34
297 298 5.036117 AGTTTGTTCTCCAGAAGCTTACA 57.964 39.130 0.00 0.00 34.27 2.41
298 299 5.437060 AGTTTGTTCTCCAGAAGCTTACAA 58.563 37.500 0.00 1.30 34.27 2.41
299 300 5.529060 AGTTTGTTCTCCAGAAGCTTACAAG 59.471 40.000 0.00 0.00 34.27 3.16
300 301 4.955811 TGTTCTCCAGAAGCTTACAAGA 57.044 40.909 0.00 0.00 34.27 3.02
301 302 4.887748 TGTTCTCCAGAAGCTTACAAGAG 58.112 43.478 0.00 3.94 34.27 2.85
302 303 4.588951 TGTTCTCCAGAAGCTTACAAGAGA 59.411 41.667 0.00 6.41 34.27 3.10
303 304 5.167845 GTTCTCCAGAAGCTTACAAGAGAG 58.832 45.833 0.00 0.59 34.27 3.20
304 305 3.194542 TCTCCAGAAGCTTACAAGAGAGC 59.805 47.826 0.00 0.00 39.17 4.09
305 306 2.899900 TCCAGAAGCTTACAAGAGAGCA 59.100 45.455 0.00 0.00 41.31 4.26
306 307 3.324846 TCCAGAAGCTTACAAGAGAGCAA 59.675 43.478 0.00 0.00 41.31 3.91
307 308 4.067896 CCAGAAGCTTACAAGAGAGCAAA 58.932 43.478 0.00 0.00 41.31 3.68
308 309 4.516698 CCAGAAGCTTACAAGAGAGCAAAA 59.483 41.667 0.00 0.00 41.31 2.44
309 310 5.182760 CCAGAAGCTTACAAGAGAGCAAAAT 59.817 40.000 0.00 0.00 41.31 1.82
310 311 6.372659 CCAGAAGCTTACAAGAGAGCAAAATA 59.627 38.462 0.00 0.00 41.31 1.40
311 312 7.413877 CCAGAAGCTTACAAGAGAGCAAAATAG 60.414 40.741 0.00 0.00 41.31 1.73
312 313 6.597280 AGAAGCTTACAAGAGAGCAAAATAGG 59.403 38.462 0.00 0.00 41.31 2.57
313 314 5.189180 AGCTTACAAGAGAGCAAAATAGGG 58.811 41.667 0.00 0.00 41.31 3.53
314 315 4.944317 GCTTACAAGAGAGCAAAATAGGGT 59.056 41.667 0.00 0.00 38.73 4.34
315 316 6.070194 AGCTTACAAGAGAGCAAAATAGGGTA 60.070 38.462 0.00 0.00 41.31 3.69
316 317 6.037281 GCTTACAAGAGAGCAAAATAGGGTAC 59.963 42.308 0.00 0.00 38.73 3.34
317 318 4.504858 ACAAGAGAGCAAAATAGGGTACG 58.495 43.478 0.00 0.00 0.00 3.67
318 319 4.020485 ACAAGAGAGCAAAATAGGGTACGT 60.020 41.667 0.00 0.00 0.00 3.57
319 320 5.186409 ACAAGAGAGCAAAATAGGGTACGTA 59.814 40.000 0.00 0.00 0.00 3.57
320 321 5.517322 AGAGAGCAAAATAGGGTACGTAG 57.483 43.478 0.00 0.00 30.08 3.51
321 322 4.049869 GAGAGCAAAATAGGGTACGTAGC 58.950 47.826 16.33 16.33 30.08 3.58
322 323 3.449737 AGAGCAAAATAGGGTACGTAGCA 59.550 43.478 24.76 7.17 30.08 3.49
323 324 3.793559 AGCAAAATAGGGTACGTAGCAG 58.206 45.455 24.76 7.52 30.08 4.24
324 325 3.449737 AGCAAAATAGGGTACGTAGCAGA 59.550 43.478 24.76 12.90 30.08 4.26
325 326 4.101119 AGCAAAATAGGGTACGTAGCAGAT 59.899 41.667 24.76 14.50 30.08 2.90
326 327 4.448060 GCAAAATAGGGTACGTAGCAGATC 59.552 45.833 24.76 8.67 30.08 2.75
327 328 4.500603 AAATAGGGTACGTAGCAGATCG 57.499 45.455 24.76 0.00 30.08 3.69
328 329 2.627515 TAGGGTACGTAGCAGATCGT 57.372 50.000 24.76 5.83 42.82 3.73
329 330 1.760192 AGGGTACGTAGCAGATCGTT 58.240 50.000 24.76 0.28 40.70 3.85
330 331 2.097825 AGGGTACGTAGCAGATCGTTT 58.902 47.619 24.76 0.00 40.70 3.60
331 332 2.159282 AGGGTACGTAGCAGATCGTTTG 60.159 50.000 24.76 0.00 40.70 2.93
332 333 2.190981 GGTACGTAGCAGATCGTTTGG 58.809 52.381 19.43 0.00 40.70 3.28
333 334 1.587034 GTACGTAGCAGATCGTTTGGC 59.413 52.381 0.00 0.00 40.70 4.52
334 335 0.037697 ACGTAGCAGATCGTTTGGCA 60.038 50.000 0.00 0.00 36.93 4.92
335 336 1.290203 CGTAGCAGATCGTTTGGCAT 58.710 50.000 0.00 0.00 0.00 4.40
336 337 1.665679 CGTAGCAGATCGTTTGGCATT 59.334 47.619 0.00 0.00 0.00 3.56
337 338 2.863740 CGTAGCAGATCGTTTGGCATTA 59.136 45.455 0.00 0.00 0.00 1.90
338 339 3.494626 CGTAGCAGATCGTTTGGCATTAT 59.505 43.478 0.00 0.00 0.00 1.28
339 340 4.684242 CGTAGCAGATCGTTTGGCATTATA 59.316 41.667 0.00 0.00 0.00 0.98
340 341 5.348724 CGTAGCAGATCGTTTGGCATTATAT 59.651 40.000 0.00 0.00 0.00 0.86
341 342 6.530181 CGTAGCAGATCGTTTGGCATTATATA 59.470 38.462 0.00 0.00 0.00 0.86
342 343 6.974932 AGCAGATCGTTTGGCATTATATAG 57.025 37.500 0.00 0.00 0.00 1.31
343 344 6.467677 AGCAGATCGTTTGGCATTATATAGT 58.532 36.000 0.00 0.00 0.00 2.12
344 345 6.591834 AGCAGATCGTTTGGCATTATATAGTC 59.408 38.462 0.00 0.00 0.00 2.59
345 346 6.454318 GCAGATCGTTTGGCATTATATAGTCG 60.454 42.308 0.00 0.00 0.00 4.18
346 347 6.586463 CAGATCGTTTGGCATTATATAGTCGT 59.414 38.462 0.00 0.00 0.00 4.34
347 348 6.586463 AGATCGTTTGGCATTATATAGTCGTG 59.414 38.462 0.00 0.00 0.00 4.35
348 349 5.834169 TCGTTTGGCATTATATAGTCGTGA 58.166 37.500 0.00 0.00 0.00 4.35
349 350 6.452242 TCGTTTGGCATTATATAGTCGTGAT 58.548 36.000 0.00 0.00 0.00 3.06
350 351 6.364976 TCGTTTGGCATTATATAGTCGTGATG 59.635 38.462 0.00 0.00 0.00 3.07
351 352 6.364976 CGTTTGGCATTATATAGTCGTGATGA 59.635 38.462 0.00 0.00 0.00 2.92
352 353 7.410835 CGTTTGGCATTATATAGTCGTGATGAG 60.411 40.741 0.00 0.00 0.00 2.90
353 354 5.410924 TGGCATTATATAGTCGTGATGAGC 58.589 41.667 0.00 0.00 0.00 4.26
354 355 4.500837 GGCATTATATAGTCGTGATGAGCG 59.499 45.833 0.00 0.00 0.00 5.03
355 356 4.500837 GCATTATATAGTCGTGATGAGCGG 59.499 45.833 0.00 0.00 0.00 5.52
356 357 4.696899 TTATATAGTCGTGATGAGCGGG 57.303 45.455 0.00 0.00 0.00 6.13
357 358 0.596577 TATAGTCGTGATGAGCGGGC 59.403 55.000 0.00 0.00 0.00 6.13
358 359 2.088674 ATAGTCGTGATGAGCGGGCC 62.089 60.000 0.00 0.00 0.00 5.80
359 360 4.451150 GTCGTGATGAGCGGGCCA 62.451 66.667 4.39 0.00 0.00 5.36
360 361 4.451150 TCGTGATGAGCGGGCCAC 62.451 66.667 4.39 0.00 0.00 5.01
361 362 4.758251 CGTGATGAGCGGGCCACA 62.758 66.667 4.39 0.24 0.00 4.17
362 363 2.821366 GTGATGAGCGGGCCACAG 60.821 66.667 4.39 0.00 0.00 3.66
363 364 4.783621 TGATGAGCGGGCCACAGC 62.784 66.667 4.39 7.08 38.76 4.40
365 366 4.790962 ATGAGCGGGCCACAGCTG 62.791 66.667 21.73 13.48 44.69 4.24
376 377 2.597340 ACAGCTGTGTGGCTTGGT 59.403 55.556 20.97 0.00 41.00 3.67
377 378 1.526917 ACAGCTGTGTGGCTTGGTC 60.527 57.895 20.97 0.00 41.00 4.02
378 379 1.526686 CAGCTGTGTGGCTTGGTCA 60.527 57.895 5.25 0.00 41.00 4.02
379 380 1.102809 CAGCTGTGTGGCTTGGTCAA 61.103 55.000 5.25 0.00 41.00 3.18
380 381 0.820891 AGCTGTGTGGCTTGGTCAAG 60.821 55.000 6.36 6.36 39.86 3.02
381 382 1.799258 GCTGTGTGGCTTGGTCAAGG 61.799 60.000 12.02 0.00 38.80 3.61
382 383 0.179020 CTGTGTGGCTTGGTCAAGGA 60.179 55.000 12.02 0.00 38.80 3.36
383 384 0.465460 TGTGTGGCTTGGTCAAGGAC 60.465 55.000 12.02 0.00 38.80 3.85
399 400 3.689872 AGGACCTCCTTGTATAGAGCA 57.310 47.619 0.00 0.00 46.09 4.26
400 401 3.995636 AGGACCTCCTTGTATAGAGCAA 58.004 45.455 0.00 0.00 46.09 3.91
401 402 4.561752 AGGACCTCCTTGTATAGAGCAAT 58.438 43.478 0.00 0.00 46.09 3.56
402 403 4.971924 AGGACCTCCTTGTATAGAGCAATT 59.028 41.667 0.00 0.00 46.09 2.32
403 404 6.143915 AGGACCTCCTTGTATAGAGCAATTA 58.856 40.000 0.00 0.00 46.09 1.40
404 405 6.042208 AGGACCTCCTTGTATAGAGCAATTAC 59.958 42.308 0.00 0.00 46.09 1.89
405 406 6.042208 GGACCTCCTTGTATAGAGCAATTACT 59.958 42.308 0.00 0.00 0.00 2.24
406 407 6.821388 ACCTCCTTGTATAGAGCAATTACTG 58.179 40.000 0.00 0.00 0.00 2.74
417 418 3.705043 GCAATTACTGCCTCTGGATTG 57.295 47.619 0.00 0.00 46.13 2.67
418 419 3.019564 GCAATTACTGCCTCTGGATTGT 58.980 45.455 0.00 0.00 46.13 2.71
419 420 4.199310 GCAATTACTGCCTCTGGATTGTA 58.801 43.478 0.00 0.00 46.13 2.41
420 421 4.640201 GCAATTACTGCCTCTGGATTGTAA 59.360 41.667 0.00 0.00 46.13 2.41
421 422 5.449177 GCAATTACTGCCTCTGGATTGTAAC 60.449 44.000 0.00 0.00 46.13 2.50
422 423 2.789409 ACTGCCTCTGGATTGTAACC 57.211 50.000 0.00 0.00 0.00 2.85
423 424 1.282157 ACTGCCTCTGGATTGTAACCC 59.718 52.381 0.00 0.00 0.00 4.11
424 425 1.561542 CTGCCTCTGGATTGTAACCCT 59.438 52.381 0.00 0.00 0.00 4.34
425 426 2.771943 CTGCCTCTGGATTGTAACCCTA 59.228 50.000 0.00 0.00 0.00 3.53
426 427 3.392616 CTGCCTCTGGATTGTAACCCTAT 59.607 47.826 0.00 0.00 0.00 2.57
427 428 3.391296 TGCCTCTGGATTGTAACCCTATC 59.609 47.826 0.00 0.00 0.00 2.08
428 429 3.391296 GCCTCTGGATTGTAACCCTATCA 59.609 47.826 0.00 0.00 0.00 2.15
429 430 4.141482 GCCTCTGGATTGTAACCCTATCAA 60.141 45.833 0.00 0.00 0.00 2.57
430 431 5.456763 GCCTCTGGATTGTAACCCTATCAAT 60.457 44.000 0.00 0.00 35.00 2.57
431 432 6.239887 GCCTCTGGATTGTAACCCTATCAATA 60.240 42.308 0.00 0.00 32.90 1.90
432 433 7.529560 GCCTCTGGATTGTAACCCTATCAATAT 60.530 40.741 0.00 0.00 32.90 1.28
433 434 7.826252 CCTCTGGATTGTAACCCTATCAATATG 59.174 40.741 0.00 0.00 32.90 1.78
434 435 7.689299 TCTGGATTGTAACCCTATCAATATGG 58.311 38.462 0.00 0.00 32.90 2.74
435 436 7.515861 TCTGGATTGTAACCCTATCAATATGGA 59.484 37.037 0.00 0.00 32.90 3.41
436 437 8.051468 TGGATTGTAACCCTATCAATATGGAA 57.949 34.615 0.00 0.00 32.90 3.53
437 438 8.677871 TGGATTGTAACCCTATCAATATGGAAT 58.322 33.333 0.00 0.00 32.90 3.01
445 446 9.588096 AACCCTATCAATATGGAATAAAACTCC 57.412 33.333 0.00 0.00 29.06 3.85
446 447 8.170730 ACCCTATCAATATGGAATAAAACTCCC 58.829 37.037 0.00 0.00 29.06 4.30
447 448 8.394040 CCCTATCAATATGGAATAAAACTCCCT 58.606 37.037 0.00 0.00 29.06 4.20
448 449 9.813826 CCTATCAATATGGAATAAAACTCCCTT 57.186 33.333 0.00 0.00 29.06 3.95
455 456 7.956328 ATGGAATAAAACTCCCTTTTACCTC 57.044 36.000 0.00 0.00 37.19 3.85
456 457 5.941647 TGGAATAAAACTCCCTTTTACCTCG 59.058 40.000 0.00 0.00 37.19 4.63
457 458 5.163683 GGAATAAAACTCCCTTTTACCTCGC 60.164 44.000 0.00 0.00 37.19 5.03
458 459 2.943036 AAACTCCCTTTTACCTCGCA 57.057 45.000 0.00 0.00 0.00 5.10
459 460 2.943036 AACTCCCTTTTACCTCGCAA 57.057 45.000 0.00 0.00 0.00 4.85
460 461 2.943036 ACTCCCTTTTACCTCGCAAA 57.057 45.000 0.00 0.00 0.00 3.68
461 462 3.217681 ACTCCCTTTTACCTCGCAAAA 57.782 42.857 0.00 0.00 0.00 2.44
496 497 5.068987 GCAAGGACATGGCTTGGAATTTATA 59.931 40.000 0.00 0.00 0.00 0.98
498 499 7.555087 CAAGGACATGGCTTGGAATTTATAAA 58.445 34.615 0.00 0.00 0.00 1.40
528 529 8.322906 TGTTCATTTTATCACTTGTAGGACAG 57.677 34.615 0.00 0.00 0.00 3.51
561 562 1.001641 AAGTCCATCTGTGGCAGGC 60.002 57.895 0.00 0.00 45.63 4.85
580 581 6.648725 GGCAGGCAAAATTACAAGTTTATTCA 59.351 34.615 0.00 0.00 0.00 2.57
657 658 8.233868 TCCAAATGTTTGATAATACGAGTTGTG 58.766 33.333 7.04 0.00 40.55 3.33
709 712 4.082408 TCAGAGTTCAGGTTGTATACGTGG 60.082 45.833 0.00 0.00 41.75 4.94
791 798 2.824341 AGAATCCGACTTCAGTACGGTT 59.176 45.455 13.85 9.59 45.71 4.44
792 799 2.935481 ATCCGACTTCAGTACGGTTC 57.065 50.000 13.85 0.00 45.71 3.62
795 802 2.086869 CCGACTTCAGTACGGTTCCTA 58.913 52.381 0.00 0.00 41.47 2.94
797 804 3.488721 CCGACTTCAGTACGGTTCCTATG 60.489 52.174 0.00 0.00 41.47 2.23
798 805 3.488721 CGACTTCAGTACGGTTCCTATGG 60.489 52.174 0.00 0.00 0.00 2.74
799 806 3.698040 GACTTCAGTACGGTTCCTATGGA 59.302 47.826 0.00 0.00 0.00 3.41
801 808 4.715297 ACTTCAGTACGGTTCCTATGGATT 59.285 41.667 0.00 0.00 0.00 3.01
802 809 5.189145 ACTTCAGTACGGTTCCTATGGATTT 59.811 40.000 0.00 0.00 0.00 2.17
900 924 1.621301 CGAGTTCCGCTCAGCAGTTG 61.621 60.000 0.00 0.00 44.33 3.16
938 963 3.131240 ACAAGTTGTTCACGTCAAAGC 57.869 42.857 1.64 0.00 0.00 3.51
942 967 3.758300 AGTTGTTCACGTCAAAGCAAAG 58.242 40.909 0.00 0.00 0.00 2.77
943 968 2.187351 TGTTCACGTCAAAGCAAAGC 57.813 45.000 0.00 0.00 0.00 3.51
944 969 1.202245 TGTTCACGTCAAAGCAAAGCC 60.202 47.619 0.00 0.00 0.00 4.35
945 970 0.028770 TTCACGTCAAAGCAAAGCCG 59.971 50.000 0.00 0.00 0.00 5.52
946 971 1.092921 TCACGTCAAAGCAAAGCCGT 61.093 50.000 0.00 0.00 0.00 5.68
967 1024 1.975407 CACTTTGGGCCTCTGCTGG 60.975 63.158 4.53 0.00 37.74 4.85
1188 1249 1.222936 CATCTCCGAGCCAGGCTTT 59.777 57.895 17.46 0.00 39.88 3.51
1193 1254 2.034066 CGAGCCAGGCTTTTCCCA 59.966 61.111 17.46 0.00 39.88 4.37
1304 1366 1.073923 GGGCCCTGATCGTATTCCATT 59.926 52.381 17.04 0.00 0.00 3.16
1307 1369 2.288825 GCCCTGATCGTATTCCATTCGA 60.289 50.000 0.00 0.00 36.53 3.71
1308 1370 3.802329 GCCCTGATCGTATTCCATTCGAA 60.802 47.826 0.00 0.00 35.75 3.71
1325 1387 1.403647 CGAACGATTGTCCTGGCAGTA 60.404 52.381 14.43 0.00 0.00 2.74
1336 1398 1.756375 CTGGCAGTATCAGCGCGAAC 61.756 60.000 12.10 0.00 0.00 3.95
1343 1405 1.993370 GTATCAGCGCGAACAAGAACT 59.007 47.619 12.10 0.00 0.00 3.01
1368 1430 0.611062 TCTCCACCTTCGGATGTCGT 60.611 55.000 0.00 0.00 40.32 4.34
1396 1458 3.695060 CCTCGTACTAGTCCATGTCAAGT 59.305 47.826 0.00 0.00 0.00 3.16
1606 1674 3.806858 TAGTGTTTACTCGTCGGAGACCA 60.807 47.826 0.00 0.00 45.95 4.02
1704 1784 1.003839 CCTTGAACCCGCTGTGCTA 60.004 57.895 0.00 0.00 0.00 3.49
1869 1987 5.220381 TCGATTATACGAACAGAAGATGGC 58.780 41.667 0.00 0.00 39.34 4.40
1996 2115 5.701224 TGGACAAACTACTGAAAATTCCCT 58.299 37.500 0.00 0.00 0.00 4.20
2002 2121 7.290014 ACAAACTACTGAAAATTCCCTTGGATT 59.710 33.333 0.00 0.00 0.00 3.01
2013 2132 3.766545 TCCCTTGGATTGAAAGAACCAG 58.233 45.455 0.00 0.00 33.85 4.00
2081 2200 3.500680 ACGGTGTTCATGTGGACAATAAC 59.499 43.478 0.00 0.00 0.00 1.89
2189 2310 0.378257 GTCTGGTGCATGTAATGGCG 59.622 55.000 0.00 0.00 46.86 5.69
2201 2322 3.068560 TGTAATGGCGTGACTTTACACC 58.931 45.455 9.42 0.00 36.59 4.16
2259 2380 4.215399 GGAATGTCGTTCACATCCTTTCAA 59.785 41.667 7.10 0.00 45.77 2.69
2356 2481 7.041030 TCGAAGCCTAGATATTGTAGAACTCAG 60.041 40.741 0.00 0.00 0.00 3.35
2563 3184 1.105167 TATCGTGCGGTCGGAGGAAT 61.105 55.000 10.80 3.93 34.37 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 2.265683 GTCCGTCGGTGAATAAGAACC 58.734 52.381 11.88 0.00 0.00 3.62
7 8 1.916000 CGTCCGTCGGTGAATAAGAAC 59.084 52.381 11.88 0.00 35.71 3.01
8 9 2.267188 CGTCCGTCGGTGAATAAGAA 57.733 50.000 11.88 0.00 35.71 2.52
25 26 2.701780 CCTACTGACGCAGCTCCGT 61.702 63.158 0.08 0.08 45.30 4.69
26 27 1.374343 TACCTACTGACGCAGCTCCG 61.374 60.000 0.00 0.00 34.37 4.63
27 28 1.033574 ATACCTACTGACGCAGCTCC 58.966 55.000 6.74 0.00 34.37 4.70
28 29 1.676529 TCATACCTACTGACGCAGCTC 59.323 52.381 6.74 0.00 34.37 4.09
29 30 1.763968 TCATACCTACTGACGCAGCT 58.236 50.000 6.74 0.00 34.37 4.24
30 31 2.802787 ATCATACCTACTGACGCAGC 57.197 50.000 6.74 0.00 34.37 5.25
31 32 4.294232 CAGAATCATACCTACTGACGCAG 58.706 47.826 5.47 5.47 37.52 5.18
32 33 3.490933 GCAGAATCATACCTACTGACGCA 60.491 47.826 0.00 0.00 0.00 5.24
33 34 3.053455 GCAGAATCATACCTACTGACGC 58.947 50.000 0.00 0.00 0.00 5.19
34 35 3.243101 ACGCAGAATCATACCTACTGACG 60.243 47.826 0.00 0.00 35.80 4.35
35 36 4.291783 GACGCAGAATCATACCTACTGAC 58.708 47.826 0.00 0.00 0.00 3.51
36 37 3.003378 CGACGCAGAATCATACCTACTGA 59.997 47.826 0.00 0.00 0.00 3.41
37 38 3.243101 ACGACGCAGAATCATACCTACTG 60.243 47.826 0.00 0.00 0.00 2.74
38 39 2.950309 ACGACGCAGAATCATACCTACT 59.050 45.455 0.00 0.00 0.00 2.57
39 40 3.351020 ACGACGCAGAATCATACCTAC 57.649 47.619 0.00 0.00 0.00 3.18
40 41 5.239963 TCATTACGACGCAGAATCATACCTA 59.760 40.000 0.00 0.00 0.00 3.08
41 42 4.037565 TCATTACGACGCAGAATCATACCT 59.962 41.667 0.00 0.00 0.00 3.08
42 43 4.295870 TCATTACGACGCAGAATCATACC 58.704 43.478 0.00 0.00 0.00 2.73
43 44 5.164051 CCATCATTACGACGCAGAATCATAC 60.164 44.000 0.00 0.00 0.00 2.39
44 45 4.923281 CCATCATTACGACGCAGAATCATA 59.077 41.667 0.00 0.00 0.00 2.15
45 46 3.742882 CCATCATTACGACGCAGAATCAT 59.257 43.478 0.00 0.00 0.00 2.45
46 47 3.123050 CCATCATTACGACGCAGAATCA 58.877 45.455 0.00 0.00 0.00 2.57
47 48 2.096713 GCCATCATTACGACGCAGAATC 60.097 50.000 0.00 0.00 0.00 2.52
48 49 1.867233 GCCATCATTACGACGCAGAAT 59.133 47.619 0.00 0.00 0.00 2.40
49 50 1.286501 GCCATCATTACGACGCAGAA 58.713 50.000 0.00 0.00 0.00 3.02
50 51 0.174617 TGCCATCATTACGACGCAGA 59.825 50.000 0.00 0.00 30.65 4.26
51 52 0.578683 CTGCCATCATTACGACGCAG 59.421 55.000 0.00 0.00 41.47 5.18
52 53 0.108377 ACTGCCATCATTACGACGCA 60.108 50.000 0.00 0.00 32.68 5.24
53 54 0.301687 CACTGCCATCATTACGACGC 59.698 55.000 0.00 0.00 0.00 5.19
54 55 1.324435 CACACTGCCATCATTACGACG 59.676 52.381 0.00 0.00 0.00 5.12
55 56 1.665679 CCACACTGCCATCATTACGAC 59.334 52.381 0.00 0.00 0.00 4.34
56 57 1.277842 ACCACACTGCCATCATTACGA 59.722 47.619 0.00 0.00 0.00 3.43
57 58 1.398041 CACCACACTGCCATCATTACG 59.602 52.381 0.00 0.00 0.00 3.18
58 59 2.436417 ACACCACACTGCCATCATTAC 58.564 47.619 0.00 0.00 0.00 1.89
59 60 2.877097 ACACCACACTGCCATCATTA 57.123 45.000 0.00 0.00 0.00 1.90
60 61 1.888512 GAACACCACACTGCCATCATT 59.111 47.619 0.00 0.00 0.00 2.57
61 62 1.202915 TGAACACCACACTGCCATCAT 60.203 47.619 0.00 0.00 0.00 2.45
62 63 0.182299 TGAACACCACACTGCCATCA 59.818 50.000 0.00 0.00 0.00 3.07
63 64 0.593128 GTGAACACCACACTGCCATC 59.407 55.000 0.00 0.00 45.03 3.51
64 65 2.719376 GTGAACACCACACTGCCAT 58.281 52.632 0.00 0.00 45.03 4.40
65 66 4.234019 GTGAACACCACACTGCCA 57.766 55.556 0.00 0.00 45.03 4.92
75 76 0.038343 TACCGGTAAGCGGTGAACAC 60.038 55.000 13.14 0.00 40.32 3.32
76 77 0.896923 ATACCGGTAAGCGGTGAACA 59.103 50.000 20.22 0.00 40.32 3.18
77 78 2.869233 TATACCGGTAAGCGGTGAAC 57.131 50.000 20.22 0.00 40.32 3.18
78 79 4.405116 AAATATACCGGTAAGCGGTGAA 57.595 40.909 20.22 0.00 40.32 3.18
79 80 4.405116 AAAATATACCGGTAAGCGGTGA 57.595 40.909 20.22 0.00 40.32 4.02
80 81 6.601741 TTAAAAATATACCGGTAAGCGGTG 57.398 37.500 20.22 0.00 40.32 4.94
81 82 7.641760 CAATTAAAAATATACCGGTAAGCGGT 58.358 34.615 20.22 0.00 42.92 5.68
82 83 6.579666 GCAATTAAAAATATACCGGTAAGCGG 59.420 38.462 20.22 0.00 0.00 5.52
83 84 7.357303 AGCAATTAAAAATATACCGGTAAGCG 58.643 34.615 20.22 0.00 0.00 4.68
88 89 8.856103 AGCATAAGCAATTAAAAATATACCGGT 58.144 29.630 13.98 13.98 45.49 5.28
89 90 9.691362 AAGCATAAGCAATTAAAAATATACCGG 57.309 29.630 0.00 0.00 45.49 5.28
95 96 9.598517 CCTCCAAAGCATAAGCAATTAAAAATA 57.401 29.630 0.00 0.00 45.49 1.40
96 97 7.066163 GCCTCCAAAGCATAAGCAATTAAAAAT 59.934 33.333 0.00 0.00 45.49 1.82
97 98 6.371271 GCCTCCAAAGCATAAGCAATTAAAAA 59.629 34.615 0.00 0.00 45.49 1.94
98 99 5.874261 GCCTCCAAAGCATAAGCAATTAAAA 59.126 36.000 0.00 0.00 45.49 1.52
99 100 5.418676 GCCTCCAAAGCATAAGCAATTAAA 58.581 37.500 0.00 0.00 45.49 1.52
100 101 4.439974 CGCCTCCAAAGCATAAGCAATTAA 60.440 41.667 0.00 0.00 45.49 1.40
101 102 3.066621 CGCCTCCAAAGCATAAGCAATTA 59.933 43.478 0.00 0.00 45.49 1.40
102 103 2.159198 CGCCTCCAAAGCATAAGCAATT 60.159 45.455 0.00 0.00 45.49 2.32
103 104 1.406539 CGCCTCCAAAGCATAAGCAAT 59.593 47.619 0.00 0.00 45.49 3.56
104 105 0.810648 CGCCTCCAAAGCATAAGCAA 59.189 50.000 0.00 0.00 45.49 3.91
105 106 1.031571 CCGCCTCCAAAGCATAAGCA 61.032 55.000 0.00 0.00 45.49 3.91
106 107 0.748005 TCCGCCTCCAAAGCATAAGC 60.748 55.000 0.00 0.00 42.56 3.09
107 108 1.134401 TCTCCGCCTCCAAAGCATAAG 60.134 52.381 0.00 0.00 0.00 1.73
108 109 0.908910 TCTCCGCCTCCAAAGCATAA 59.091 50.000 0.00 0.00 0.00 1.90
109 110 1.131638 ATCTCCGCCTCCAAAGCATA 58.868 50.000 0.00 0.00 0.00 3.14
110 111 0.257039 AATCTCCGCCTCCAAAGCAT 59.743 50.000 0.00 0.00 0.00 3.79
111 112 0.392998 GAATCTCCGCCTCCAAAGCA 60.393 55.000 0.00 0.00 0.00 3.91
112 113 0.392998 TGAATCTCCGCCTCCAAAGC 60.393 55.000 0.00 0.00 0.00 3.51
113 114 1.373570 GTGAATCTCCGCCTCCAAAG 58.626 55.000 0.00 0.00 0.00 2.77
114 115 0.391130 CGTGAATCTCCGCCTCCAAA 60.391 55.000 0.00 0.00 0.00 3.28
115 116 1.218047 CGTGAATCTCCGCCTCCAA 59.782 57.895 0.00 0.00 0.00 3.53
116 117 2.892640 CGTGAATCTCCGCCTCCA 59.107 61.111 0.00 0.00 0.00 3.86
117 118 2.586357 GCGTGAATCTCCGCCTCC 60.586 66.667 6.61 0.00 43.96 4.30
122 123 1.258982 GCATTAGTGCGTGAATCTCCG 59.741 52.381 0.00 0.00 42.28 4.63
134 135 2.277969 CCTCTGAGTGCTGCATTAGTG 58.722 52.381 5.27 5.83 0.00 2.74
135 136 1.209019 CCCTCTGAGTGCTGCATTAGT 59.791 52.381 5.27 0.00 0.00 2.24
136 137 1.209019 ACCCTCTGAGTGCTGCATTAG 59.791 52.381 5.27 5.04 0.00 1.73
137 138 1.279496 ACCCTCTGAGTGCTGCATTA 58.721 50.000 5.27 0.00 0.00 1.90
138 139 0.403271 AACCCTCTGAGTGCTGCATT 59.597 50.000 5.27 0.00 0.00 3.56
139 140 0.035630 GAACCCTCTGAGTGCTGCAT 60.036 55.000 5.27 0.00 0.00 3.96
140 141 1.123861 AGAACCCTCTGAGTGCTGCA 61.124 55.000 0.00 0.00 0.00 4.41
141 142 0.898320 TAGAACCCTCTGAGTGCTGC 59.102 55.000 3.66 0.00 32.70 5.25
142 143 3.055530 ACAATAGAACCCTCTGAGTGCTG 60.056 47.826 3.66 0.00 32.70 4.41
143 144 3.177228 ACAATAGAACCCTCTGAGTGCT 58.823 45.455 3.66 0.00 32.70 4.40
144 145 3.618690 ACAATAGAACCCTCTGAGTGC 57.381 47.619 3.66 0.00 32.70 4.40
145 146 4.899502 ACAACAATAGAACCCTCTGAGTG 58.100 43.478 3.66 0.00 32.70 3.51
146 147 5.071788 TGAACAACAATAGAACCCTCTGAGT 59.928 40.000 3.66 0.00 32.70 3.41
147 148 5.551233 TGAACAACAATAGAACCCTCTGAG 58.449 41.667 0.00 0.00 32.70 3.35
148 149 5.071788 ACTGAACAACAATAGAACCCTCTGA 59.928 40.000 0.00 0.00 32.70 3.27
149 150 5.308825 ACTGAACAACAATAGAACCCTCTG 58.691 41.667 0.00 0.00 32.70 3.35
150 151 5.513267 GGACTGAACAACAATAGAACCCTCT 60.513 44.000 0.00 0.00 35.52 3.69
151 152 4.695928 GGACTGAACAACAATAGAACCCTC 59.304 45.833 0.00 0.00 0.00 4.30
152 153 4.652822 GGACTGAACAACAATAGAACCCT 58.347 43.478 0.00 0.00 0.00 4.34
153 154 3.435671 CGGACTGAACAACAATAGAACCC 59.564 47.826 0.00 0.00 0.00 4.11
154 155 4.151867 GTCGGACTGAACAACAATAGAACC 59.848 45.833 0.00 0.00 0.00 3.62
155 156 4.989168 AGTCGGACTGAACAACAATAGAAC 59.011 41.667 10.41 0.00 0.00 3.01
156 157 5.010719 AGAGTCGGACTGAACAACAATAGAA 59.989 40.000 16.72 0.00 0.00 2.10
157 158 4.523173 AGAGTCGGACTGAACAACAATAGA 59.477 41.667 16.72 0.00 0.00 1.98
158 159 4.810790 AGAGTCGGACTGAACAACAATAG 58.189 43.478 16.72 0.00 0.00 1.73
159 160 4.866508 AGAGTCGGACTGAACAACAATA 57.133 40.909 16.72 0.00 0.00 1.90
160 161 3.753294 AGAGTCGGACTGAACAACAAT 57.247 42.857 16.72 0.00 0.00 2.71
161 162 3.132289 AGAAGAGTCGGACTGAACAACAA 59.868 43.478 16.72 0.00 0.00 2.83
162 163 2.693591 AGAAGAGTCGGACTGAACAACA 59.306 45.455 16.72 0.00 0.00 3.33
163 164 3.053455 CAGAAGAGTCGGACTGAACAAC 58.947 50.000 16.72 0.00 32.90 3.32
164 165 2.956333 TCAGAAGAGTCGGACTGAACAA 59.044 45.455 16.72 0.00 36.63 2.83
165 166 2.583143 TCAGAAGAGTCGGACTGAACA 58.417 47.619 16.72 0.00 36.63 3.18
166 167 3.570559 CTTCAGAAGAGTCGGACTGAAC 58.429 50.000 16.72 6.20 42.05 3.18
167 168 2.029828 GCTTCAGAAGAGTCGGACTGAA 60.030 50.000 16.72 19.93 43.79 3.02
168 169 1.542030 GCTTCAGAAGAGTCGGACTGA 59.458 52.381 16.72 4.08 37.56 3.41
169 170 1.270826 TGCTTCAGAAGAGTCGGACTG 59.729 52.381 16.72 1.41 0.00 3.51
170 171 1.621992 TGCTTCAGAAGAGTCGGACT 58.378 50.000 14.86 11.09 0.00 3.85
171 172 2.663826 ATGCTTCAGAAGAGTCGGAC 57.336 50.000 14.86 0.00 0.00 4.79
172 173 2.300152 ACAATGCTTCAGAAGAGTCGGA 59.700 45.455 14.86 0.00 0.00 4.55
173 174 2.670414 GACAATGCTTCAGAAGAGTCGG 59.330 50.000 14.86 1.53 0.00 4.79
174 175 3.320626 TGACAATGCTTCAGAAGAGTCG 58.679 45.455 14.86 1.81 0.00 4.18
175 176 4.694509 ACATGACAATGCTTCAGAAGAGTC 59.305 41.667 14.86 14.31 37.29 3.36
176 177 4.649692 ACATGACAATGCTTCAGAAGAGT 58.350 39.130 14.86 6.08 37.29 3.24
177 178 4.936411 AGACATGACAATGCTTCAGAAGAG 59.064 41.667 14.86 2.93 37.29 2.85
178 179 4.903054 AGACATGACAATGCTTCAGAAGA 58.097 39.130 14.86 0.00 37.29 2.87
179 180 5.624344 AAGACATGACAATGCTTCAGAAG 57.376 39.130 5.72 5.72 37.29 2.85
180 181 5.048504 GGAAAGACATGACAATGCTTCAGAA 60.049 40.000 0.00 0.00 37.29 3.02
181 182 4.456911 GGAAAGACATGACAATGCTTCAGA 59.543 41.667 0.00 0.00 37.29 3.27
182 183 4.670992 CGGAAAGACATGACAATGCTTCAG 60.671 45.833 0.00 0.00 37.29 3.02
183 184 3.189080 CGGAAAGACATGACAATGCTTCA 59.811 43.478 0.00 0.00 37.29 3.02
184 185 3.436704 TCGGAAAGACATGACAATGCTTC 59.563 43.478 0.00 0.00 37.29 3.86
185 186 3.411446 TCGGAAAGACATGACAATGCTT 58.589 40.909 0.00 0.00 37.29 3.91
186 187 3.057969 TCGGAAAGACATGACAATGCT 57.942 42.857 0.00 0.00 37.29 3.79
187 188 4.095483 AGAATCGGAAAGACATGACAATGC 59.905 41.667 0.00 0.00 37.29 3.56
188 189 5.808042 AGAATCGGAAAGACATGACAATG 57.192 39.130 0.00 0.00 39.89 2.82
189 190 6.758886 GTCTAGAATCGGAAAGACATGACAAT 59.241 38.462 0.00 0.00 38.56 2.71
190 191 6.071334 AGTCTAGAATCGGAAAGACATGACAA 60.071 38.462 0.00 0.00 40.65 3.18
191 192 5.419155 AGTCTAGAATCGGAAAGACATGACA 59.581 40.000 0.00 0.00 40.65 3.58
192 193 5.897050 AGTCTAGAATCGGAAAGACATGAC 58.103 41.667 0.00 0.00 40.65 3.06
193 194 7.640597 TTAGTCTAGAATCGGAAAGACATGA 57.359 36.000 0.00 0.00 40.65 3.07
194 195 6.419413 GCTTAGTCTAGAATCGGAAAGACATG 59.581 42.308 0.00 0.00 40.65 3.21
195 196 6.096987 TGCTTAGTCTAGAATCGGAAAGACAT 59.903 38.462 0.00 4.51 40.65 3.06
196 197 5.417894 TGCTTAGTCTAGAATCGGAAAGACA 59.582 40.000 0.00 0.00 40.65 3.41
197 198 5.892568 TGCTTAGTCTAGAATCGGAAAGAC 58.107 41.667 0.00 0.00 38.90 3.01
198 199 5.067936 CCTGCTTAGTCTAGAATCGGAAAGA 59.932 44.000 0.00 0.00 0.00 2.52
199 200 5.163499 ACCTGCTTAGTCTAGAATCGGAAAG 60.163 44.000 0.00 0.00 0.00 2.62
200 201 4.710375 ACCTGCTTAGTCTAGAATCGGAAA 59.290 41.667 0.00 0.00 0.00 3.13
201 202 4.279145 ACCTGCTTAGTCTAGAATCGGAA 58.721 43.478 0.00 0.00 0.00 4.30
202 203 3.884091 GACCTGCTTAGTCTAGAATCGGA 59.116 47.826 0.00 0.00 0.00 4.55
203 204 3.632604 TGACCTGCTTAGTCTAGAATCGG 59.367 47.826 0.00 0.00 35.21 4.18
204 205 4.791411 GCTGACCTGCTTAGTCTAGAATCG 60.791 50.000 0.00 0.00 35.21 3.34
205 206 4.098654 TGCTGACCTGCTTAGTCTAGAATC 59.901 45.833 0.00 0.00 35.21 2.52
206 207 4.026744 TGCTGACCTGCTTAGTCTAGAAT 58.973 43.478 0.00 0.00 35.21 2.40
207 208 3.431415 TGCTGACCTGCTTAGTCTAGAA 58.569 45.455 0.00 0.00 35.21 2.10
208 209 3.087370 TGCTGACCTGCTTAGTCTAGA 57.913 47.619 0.00 0.00 35.21 2.43
209 210 5.468592 CATATGCTGACCTGCTTAGTCTAG 58.531 45.833 0.00 0.00 35.21 2.43
210 211 4.281941 CCATATGCTGACCTGCTTAGTCTA 59.718 45.833 0.00 0.00 35.21 2.59
211 212 3.070734 CCATATGCTGACCTGCTTAGTCT 59.929 47.826 0.00 0.00 35.21 3.24
212 213 3.070159 TCCATATGCTGACCTGCTTAGTC 59.930 47.826 0.00 0.00 34.72 2.59
213 214 3.041211 TCCATATGCTGACCTGCTTAGT 58.959 45.455 0.00 0.00 0.00 2.24
214 215 3.181462 TGTCCATATGCTGACCTGCTTAG 60.181 47.826 8.95 0.00 0.00 2.18
215 216 2.771372 TGTCCATATGCTGACCTGCTTA 59.229 45.455 8.95 0.00 0.00 3.09
216 217 1.561076 TGTCCATATGCTGACCTGCTT 59.439 47.619 8.95 0.00 0.00 3.91
217 218 1.134280 GTGTCCATATGCTGACCTGCT 60.134 52.381 8.95 0.00 0.00 4.24
218 219 1.134280 AGTGTCCATATGCTGACCTGC 60.134 52.381 8.95 0.00 0.00 4.85
219 220 2.996249 AGTGTCCATATGCTGACCTG 57.004 50.000 8.95 0.00 0.00 4.00
220 221 4.033709 ACTAAGTGTCCATATGCTGACCT 58.966 43.478 8.95 4.39 0.00 3.85
221 222 4.408182 ACTAAGTGTCCATATGCTGACC 57.592 45.455 8.95 2.64 0.00 4.02
222 223 4.034510 GCAACTAAGTGTCCATATGCTGAC 59.965 45.833 0.00 1.16 0.00 3.51
223 224 4.191544 GCAACTAAGTGTCCATATGCTGA 58.808 43.478 0.00 0.00 0.00 4.26
224 225 3.940852 TGCAACTAAGTGTCCATATGCTG 59.059 43.478 0.00 0.00 30.97 4.41
225 226 4.080919 TCTGCAACTAAGTGTCCATATGCT 60.081 41.667 0.00 0.00 30.97 3.79
226 227 4.191544 TCTGCAACTAAGTGTCCATATGC 58.808 43.478 0.00 0.00 0.00 3.14
227 228 5.664457 TCTCTGCAACTAAGTGTCCATATG 58.336 41.667 0.00 0.00 0.00 1.78
228 229 5.939764 TCTCTGCAACTAAGTGTCCATAT 57.060 39.130 0.00 0.00 0.00 1.78
229 230 5.939764 ATCTCTGCAACTAAGTGTCCATA 57.060 39.130 0.00 0.00 0.00 2.74
230 231 4.833478 ATCTCTGCAACTAAGTGTCCAT 57.167 40.909 0.00 0.00 0.00 3.41
231 232 5.738619 TTATCTCTGCAACTAAGTGTCCA 57.261 39.130 0.00 0.00 0.00 4.02
232 233 6.402658 GCTTTTATCTCTGCAACTAAGTGTCC 60.403 42.308 0.00 0.00 0.00 4.02
233 234 6.147821 TGCTTTTATCTCTGCAACTAAGTGTC 59.852 38.462 0.00 0.00 32.12 3.67
234 235 5.997746 TGCTTTTATCTCTGCAACTAAGTGT 59.002 36.000 0.00 0.00 32.12 3.55
235 236 6.073058 TGTGCTTTTATCTCTGCAACTAAGTG 60.073 38.462 0.00 0.00 37.17 3.16
236 237 5.997746 TGTGCTTTTATCTCTGCAACTAAGT 59.002 36.000 0.00 0.00 37.17 2.24
237 238 6.073058 TGTGTGCTTTTATCTCTGCAACTAAG 60.073 38.462 0.00 0.00 37.17 2.18
238 239 5.762711 TGTGTGCTTTTATCTCTGCAACTAA 59.237 36.000 0.00 0.00 37.17 2.24
239 240 5.304778 TGTGTGCTTTTATCTCTGCAACTA 58.695 37.500 0.00 0.00 37.17 2.24
240 241 4.136796 TGTGTGCTTTTATCTCTGCAACT 58.863 39.130 0.00 0.00 37.17 3.16
241 242 4.488126 TGTGTGCTTTTATCTCTGCAAC 57.512 40.909 0.00 0.00 37.17 4.17
242 243 5.050644 CATGTGTGCTTTTATCTCTGCAA 57.949 39.130 0.00 0.00 37.17 4.08
243 244 4.690184 CATGTGTGCTTTTATCTCTGCA 57.310 40.909 0.00 0.00 0.00 4.41
257 258 1.134401 ACTCCCGGATAAGCATGTGTG 60.134 52.381 0.73 0.00 0.00 3.82
258 259 1.204146 ACTCCCGGATAAGCATGTGT 58.796 50.000 0.73 0.00 0.00 3.72
259 260 2.332063 AACTCCCGGATAAGCATGTG 57.668 50.000 0.73 0.00 0.00 3.21
260 261 2.026262 ACAAACTCCCGGATAAGCATGT 60.026 45.455 0.73 3.65 0.00 3.21
261 262 2.643551 ACAAACTCCCGGATAAGCATG 58.356 47.619 0.73 3.02 0.00 4.06
262 263 3.054361 AGAACAAACTCCCGGATAAGCAT 60.054 43.478 0.73 0.00 0.00 3.79
263 264 2.304761 AGAACAAACTCCCGGATAAGCA 59.695 45.455 0.73 0.00 0.00 3.91
264 265 2.937149 GAGAACAAACTCCCGGATAAGC 59.063 50.000 0.73 0.00 0.00 3.09
274 275 5.057149 TGTAAGCTTCTGGAGAACAAACTC 58.943 41.667 0.00 0.00 36.31 3.01
275 276 5.036117 TGTAAGCTTCTGGAGAACAAACT 57.964 39.130 0.00 0.00 0.00 2.66
276 277 5.527582 TCTTGTAAGCTTCTGGAGAACAAAC 59.472 40.000 0.00 0.00 0.00 2.93
277 278 5.680619 TCTTGTAAGCTTCTGGAGAACAAA 58.319 37.500 0.00 0.00 0.00 2.83
278 279 5.070446 TCTCTTGTAAGCTTCTGGAGAACAA 59.930 40.000 0.00 5.34 0.00 2.83
279 280 4.588951 TCTCTTGTAAGCTTCTGGAGAACA 59.411 41.667 0.00 0.00 0.00 3.18
280 281 5.140747 TCTCTTGTAAGCTTCTGGAGAAC 57.859 43.478 0.00 0.00 0.00 3.01
281 282 4.322349 GCTCTCTTGTAAGCTTCTGGAGAA 60.322 45.833 0.00 0.00 35.60 2.87
282 283 3.194542 GCTCTCTTGTAAGCTTCTGGAGA 59.805 47.826 0.00 11.08 35.60 3.71
283 284 3.056250 TGCTCTCTTGTAAGCTTCTGGAG 60.056 47.826 0.00 7.23 39.31 3.86
284 285 2.899900 TGCTCTCTTGTAAGCTTCTGGA 59.100 45.455 0.00 0.00 39.31 3.86
285 286 3.325293 TGCTCTCTTGTAAGCTTCTGG 57.675 47.619 0.00 0.00 39.31 3.86
286 287 5.679734 TTTTGCTCTCTTGTAAGCTTCTG 57.320 39.130 0.00 0.00 39.31 3.02
287 288 6.597280 CCTATTTTGCTCTCTTGTAAGCTTCT 59.403 38.462 0.00 0.00 39.31 2.85
288 289 6.183360 CCCTATTTTGCTCTCTTGTAAGCTTC 60.183 42.308 0.00 0.00 39.31 3.86
289 290 5.649831 CCCTATTTTGCTCTCTTGTAAGCTT 59.350 40.000 3.48 3.48 39.31 3.74
290 291 5.189180 CCCTATTTTGCTCTCTTGTAAGCT 58.811 41.667 0.00 0.00 39.31 3.74
291 292 4.944317 ACCCTATTTTGCTCTCTTGTAAGC 59.056 41.667 0.00 0.00 39.02 3.09
292 293 6.255887 CGTACCCTATTTTGCTCTCTTGTAAG 59.744 42.308 0.00 0.00 0.00 2.34
293 294 6.103997 CGTACCCTATTTTGCTCTCTTGTAA 58.896 40.000 0.00 0.00 0.00 2.41
294 295 5.186409 ACGTACCCTATTTTGCTCTCTTGTA 59.814 40.000 0.00 0.00 0.00 2.41
295 296 4.020485 ACGTACCCTATTTTGCTCTCTTGT 60.020 41.667 0.00 0.00 0.00 3.16
296 297 4.504858 ACGTACCCTATTTTGCTCTCTTG 58.495 43.478 0.00 0.00 0.00 3.02
297 298 4.820894 ACGTACCCTATTTTGCTCTCTT 57.179 40.909 0.00 0.00 0.00 2.85
298 299 4.202131 GCTACGTACCCTATTTTGCTCTCT 60.202 45.833 0.00 0.00 0.00 3.10
299 300 4.049869 GCTACGTACCCTATTTTGCTCTC 58.950 47.826 0.00 0.00 0.00 3.20
300 301 3.449737 TGCTACGTACCCTATTTTGCTCT 59.550 43.478 0.00 0.00 0.00 4.09
301 302 3.788937 TGCTACGTACCCTATTTTGCTC 58.211 45.455 0.00 0.00 0.00 4.26
302 303 3.449737 TCTGCTACGTACCCTATTTTGCT 59.550 43.478 0.00 0.00 0.00 3.91
303 304 3.788937 TCTGCTACGTACCCTATTTTGC 58.211 45.455 0.00 0.00 0.00 3.68
304 305 4.680110 CGATCTGCTACGTACCCTATTTTG 59.320 45.833 0.00 0.00 0.00 2.44
305 306 4.340381 ACGATCTGCTACGTACCCTATTTT 59.660 41.667 0.00 0.00 40.92 1.82
306 307 3.887716 ACGATCTGCTACGTACCCTATTT 59.112 43.478 0.00 0.00 40.92 1.40
307 308 3.484407 ACGATCTGCTACGTACCCTATT 58.516 45.455 0.00 0.00 40.92 1.73
308 309 3.137446 ACGATCTGCTACGTACCCTAT 57.863 47.619 0.00 0.00 40.92 2.57
309 310 2.627515 ACGATCTGCTACGTACCCTA 57.372 50.000 0.00 0.00 40.92 3.53
310 311 1.760192 AACGATCTGCTACGTACCCT 58.240 50.000 0.00 0.00 41.87 4.34
311 312 2.190981 CAAACGATCTGCTACGTACCC 58.809 52.381 0.00 0.00 41.87 3.69
312 313 2.190981 CCAAACGATCTGCTACGTACC 58.809 52.381 0.00 0.00 41.87 3.34
313 314 1.587034 GCCAAACGATCTGCTACGTAC 59.413 52.381 0.00 0.00 41.87 3.67
314 315 1.202817 TGCCAAACGATCTGCTACGTA 59.797 47.619 0.00 0.00 41.87 3.57
315 316 0.037697 TGCCAAACGATCTGCTACGT 60.038 50.000 0.00 0.00 44.57 3.57
316 317 1.290203 ATGCCAAACGATCTGCTACG 58.710 50.000 0.00 0.00 0.00 3.51
317 318 6.727824 ATATAATGCCAAACGATCTGCTAC 57.272 37.500 0.00 0.00 0.00 3.58
318 319 7.611770 ACTATATAATGCCAAACGATCTGCTA 58.388 34.615 0.00 0.00 0.00 3.49
319 320 6.467677 ACTATATAATGCCAAACGATCTGCT 58.532 36.000 0.00 0.00 0.00 4.24
320 321 6.454318 CGACTATATAATGCCAAACGATCTGC 60.454 42.308 0.00 0.00 0.00 4.26
321 322 6.586463 ACGACTATATAATGCCAAACGATCTG 59.414 38.462 0.00 0.00 0.00 2.90
322 323 6.586463 CACGACTATATAATGCCAAACGATCT 59.414 38.462 0.00 0.00 0.00 2.75
323 324 6.584942 TCACGACTATATAATGCCAAACGATC 59.415 38.462 0.00 0.00 0.00 3.69
324 325 6.452242 TCACGACTATATAATGCCAAACGAT 58.548 36.000 0.00 0.00 0.00 3.73
325 326 5.834169 TCACGACTATATAATGCCAAACGA 58.166 37.500 0.00 0.00 0.00 3.85
326 327 6.364976 TCATCACGACTATATAATGCCAAACG 59.635 38.462 0.00 0.00 0.00 3.60
327 328 7.622256 GCTCATCACGACTATATAATGCCAAAC 60.622 40.741 0.00 0.00 0.00 2.93
328 329 6.368791 GCTCATCACGACTATATAATGCCAAA 59.631 38.462 0.00 0.00 0.00 3.28
329 330 5.869344 GCTCATCACGACTATATAATGCCAA 59.131 40.000 0.00 0.00 0.00 4.52
330 331 5.410924 GCTCATCACGACTATATAATGCCA 58.589 41.667 0.00 0.00 0.00 4.92
331 332 4.500837 CGCTCATCACGACTATATAATGCC 59.499 45.833 0.00 0.00 0.00 4.40
332 333 4.500837 CCGCTCATCACGACTATATAATGC 59.499 45.833 0.00 0.00 0.00 3.56
333 334 5.037385 CCCGCTCATCACGACTATATAATG 58.963 45.833 0.00 0.00 0.00 1.90
334 335 4.440250 GCCCGCTCATCACGACTATATAAT 60.440 45.833 0.00 0.00 0.00 1.28
335 336 3.119602 GCCCGCTCATCACGACTATATAA 60.120 47.826 0.00 0.00 0.00 0.98
336 337 2.422479 GCCCGCTCATCACGACTATATA 59.578 50.000 0.00 0.00 0.00 0.86
337 338 1.202582 GCCCGCTCATCACGACTATAT 59.797 52.381 0.00 0.00 0.00 0.86
338 339 0.596577 GCCCGCTCATCACGACTATA 59.403 55.000 0.00 0.00 0.00 1.31
339 340 1.364171 GCCCGCTCATCACGACTAT 59.636 57.895 0.00 0.00 0.00 2.12
340 341 2.782222 GGCCCGCTCATCACGACTA 61.782 63.158 0.00 0.00 0.00 2.59
341 342 4.148825 GGCCCGCTCATCACGACT 62.149 66.667 0.00 0.00 0.00 4.18
342 343 4.451150 TGGCCCGCTCATCACGAC 62.451 66.667 0.00 0.00 0.00 4.34
343 344 4.451150 GTGGCCCGCTCATCACGA 62.451 66.667 0.00 0.00 0.00 4.35
344 345 4.758251 TGTGGCCCGCTCATCACG 62.758 66.667 0.00 0.00 33.25 4.35
345 346 2.821366 CTGTGGCCCGCTCATCAC 60.821 66.667 0.00 0.00 0.00 3.06
346 347 4.783621 GCTGTGGCCCGCTCATCA 62.784 66.667 0.00 0.00 0.00 3.07
347 348 4.479993 AGCTGTGGCCCGCTCATC 62.480 66.667 0.00 0.00 39.73 2.92
348 349 4.790962 CAGCTGTGGCCCGCTCAT 62.791 66.667 5.25 0.00 39.73 2.90
359 360 1.526917 GACCAAGCCACACAGCTGT 60.527 57.895 15.25 15.25 44.11 4.40
360 361 1.102809 TTGACCAAGCCACACAGCTG 61.103 55.000 13.48 13.48 44.11 4.24
362 363 1.656441 CTTGACCAAGCCACACAGC 59.344 57.895 0.00 0.00 0.00 4.40
363 364 0.179020 TCCTTGACCAAGCCACACAG 60.179 55.000 4.31 0.00 37.11 3.66
364 365 0.465460 GTCCTTGACCAAGCCACACA 60.465 55.000 4.31 0.00 37.11 3.72
365 366 2.331265 GTCCTTGACCAAGCCACAC 58.669 57.895 4.31 0.00 37.11 3.82
366 367 4.898607 GTCCTTGACCAAGCCACA 57.101 55.556 4.31 0.00 37.11 4.17
380 381 4.965200 ATTGCTCTATACAAGGAGGTCC 57.035 45.455 0.00 0.00 0.00 4.46
381 382 6.926272 CAGTAATTGCTCTATACAAGGAGGTC 59.074 42.308 0.00 0.00 0.00 3.85
382 383 6.821388 CAGTAATTGCTCTATACAAGGAGGT 58.179 40.000 0.00 0.00 0.00 3.85
398 399 5.066505 GGTTACAATCCAGAGGCAGTAATTG 59.933 44.000 0.00 0.00 0.00 2.32
399 400 5.193679 GGTTACAATCCAGAGGCAGTAATT 58.806 41.667 0.00 0.00 0.00 1.40
400 401 4.385310 GGGTTACAATCCAGAGGCAGTAAT 60.385 45.833 0.00 0.00 0.00 1.89
401 402 3.054655 GGGTTACAATCCAGAGGCAGTAA 60.055 47.826 0.00 0.00 0.00 2.24
402 403 2.504175 GGGTTACAATCCAGAGGCAGTA 59.496 50.000 0.00 0.00 0.00 2.74
403 404 1.282157 GGGTTACAATCCAGAGGCAGT 59.718 52.381 0.00 0.00 0.00 4.40
404 405 1.561542 AGGGTTACAATCCAGAGGCAG 59.438 52.381 0.00 0.00 0.00 4.85
405 406 1.668826 AGGGTTACAATCCAGAGGCA 58.331 50.000 0.00 0.00 0.00 4.75
406 407 3.391296 TGATAGGGTTACAATCCAGAGGC 59.609 47.826 0.00 0.00 0.00 4.70
407 408 5.630415 TTGATAGGGTTACAATCCAGAGG 57.370 43.478 0.00 0.00 0.00 3.69
408 409 7.826252 CCATATTGATAGGGTTACAATCCAGAG 59.174 40.741 0.00 0.00 36.06 3.35
409 410 7.515861 TCCATATTGATAGGGTTACAATCCAGA 59.484 37.037 0.00 0.00 35.76 3.86
410 411 7.689299 TCCATATTGATAGGGTTACAATCCAG 58.311 38.462 0.00 0.00 35.76 3.86
411 412 7.640577 TCCATATTGATAGGGTTACAATCCA 57.359 36.000 0.00 0.00 35.76 3.41
419 420 9.588096 GGAGTTTTATTCCATATTGATAGGGTT 57.412 33.333 2.04 0.00 35.76 4.11
420 421 8.170730 GGGAGTTTTATTCCATATTGATAGGGT 58.829 37.037 2.04 0.00 35.76 4.34
421 422 8.394040 AGGGAGTTTTATTCCATATTGATAGGG 58.606 37.037 0.00 0.00 36.40 3.53
422 423 9.813826 AAGGGAGTTTTATTCCATATTGATAGG 57.186 33.333 0.00 0.00 36.40 2.57
429 430 9.642343 GAGGTAAAAGGGAGTTTTATTCCATAT 57.358 33.333 0.00 0.00 41.59 1.78
430 431 7.771826 CGAGGTAAAAGGGAGTTTTATTCCATA 59.228 37.037 0.00 0.00 41.59 2.74
431 432 6.602009 CGAGGTAAAAGGGAGTTTTATTCCAT 59.398 38.462 0.00 0.00 41.59 3.41
432 433 5.941647 CGAGGTAAAAGGGAGTTTTATTCCA 59.058 40.000 0.00 0.00 41.59 3.53
433 434 5.163683 GCGAGGTAAAAGGGAGTTTTATTCC 60.164 44.000 0.00 0.00 41.59 3.01
434 435 5.413523 TGCGAGGTAAAAGGGAGTTTTATTC 59.586 40.000 0.00 0.00 41.59 1.75
435 436 5.318630 TGCGAGGTAAAAGGGAGTTTTATT 58.681 37.500 0.00 0.00 41.59 1.40
436 437 4.913784 TGCGAGGTAAAAGGGAGTTTTAT 58.086 39.130 0.00 0.00 41.59 1.40
437 438 4.354893 TGCGAGGTAAAAGGGAGTTTTA 57.645 40.909 0.00 0.00 39.23 1.52
438 439 3.217681 TGCGAGGTAAAAGGGAGTTTT 57.782 42.857 0.00 0.00 41.45 2.43
439 440 2.943036 TGCGAGGTAAAAGGGAGTTT 57.057 45.000 0.00 0.00 0.00 2.66
440 441 2.943036 TTGCGAGGTAAAAGGGAGTT 57.057 45.000 0.00 0.00 0.00 3.01
441 442 2.943036 TTTGCGAGGTAAAAGGGAGT 57.057 45.000 0.00 0.00 0.00 3.85
461 462 4.761975 CCATGTCCTTGCTATGCATTTTT 58.238 39.130 3.54 0.00 38.76 1.94
469 470 1.565759 TCCAAGCCATGTCCTTGCTAT 59.434 47.619 14.60 0.00 38.63 2.97
551 552 3.243839 ACTTGTAATTTTGCCTGCCACAG 60.244 43.478 0.00 0.00 0.00 3.66
580 581 7.961325 AATTTAGCACGTCAAAATGGAAAAT 57.039 28.000 0.00 0.00 0.00 1.82
657 658 4.222847 GATCCGGCCGAGTCCCAC 62.223 72.222 30.73 6.70 0.00 4.61
709 712 2.186076 CTTCTATGAAGGACGCACGTC 58.814 52.381 14.58 14.58 43.87 4.34
791 798 2.431997 AGGGCATCCAAATCCATAGGA 58.568 47.619 0.00 0.00 33.37 2.94
792 799 2.986534 AGGGCATCCAAATCCATAGG 57.013 50.000 0.00 0.00 34.83 2.57
795 802 2.146998 AGGTAGGGCATCCAAATCCAT 58.853 47.619 0.00 0.00 34.83 3.41
797 804 5.717119 ATATAGGTAGGGCATCCAAATCC 57.283 43.478 0.00 0.00 34.83 3.01
801 808 9.159254 CTCATTATATATAGGTAGGGCATCCAA 57.841 37.037 0.00 0.00 34.83 3.53
802 809 7.235606 GCTCATTATATATAGGTAGGGCATCCA 59.764 40.741 0.00 0.00 34.83 3.41
900 924 5.238583 ACTTGTAATATTAGCTGCCGGATC 58.761 41.667 5.05 0.00 0.00 3.36
937 962 1.208259 CCAAAGTGAAACGGCTTTGC 58.792 50.000 10.46 0.00 45.91 3.68
938 963 1.851658 CCCAAAGTGAAACGGCTTTG 58.148 50.000 9.32 9.32 46.47 2.77
942 967 2.142357 GAGGCCCAAAGTGAAACGGC 62.142 60.000 0.00 0.00 45.86 5.68
943 968 0.537371 AGAGGCCCAAAGTGAAACGG 60.537 55.000 0.00 0.00 45.86 4.44
944 969 0.593128 CAGAGGCCCAAAGTGAAACG 59.407 55.000 0.00 0.00 45.86 3.60
945 970 0.315251 GCAGAGGCCCAAAGTGAAAC 59.685 55.000 0.00 0.00 0.00 2.78
946 971 0.185901 AGCAGAGGCCCAAAGTGAAA 59.814 50.000 0.00 0.00 42.56 2.69
1018 1076 2.308690 GGGGATGCTACTACTCGTCTT 58.691 52.381 0.00 0.00 0.00 3.01
1304 1366 0.389817 CTGCCAGGACAATCGTTCGA 60.390 55.000 0.00 0.00 0.00 3.71
1307 1369 2.236146 TGATACTGCCAGGACAATCGTT 59.764 45.455 0.00 0.00 0.00 3.85
1308 1370 1.831106 TGATACTGCCAGGACAATCGT 59.169 47.619 0.00 0.00 0.00 3.73
1325 1387 0.792640 CAGTTCTTGTTCGCGCTGAT 59.207 50.000 5.56 0.00 0.00 2.90
1343 1405 2.362242 CCGAAGGTGGAGAAGTCCA 58.638 57.895 0.00 0.00 46.48 4.02
1368 1430 1.688772 GGACTAGTACGAGGCCATCA 58.311 55.000 22.04 0.00 45.09 3.07
1396 1458 3.727419 GCTTTAGCGGTTCGAGGTA 57.273 52.632 0.00 0.00 0.00 3.08
1869 1987 1.348036 AGAGAGAGAAAACCCAACCCG 59.652 52.381 0.00 0.00 0.00 5.28
1996 2115 7.416964 TTTTTCTCTGGTTCTTTCAATCCAA 57.583 32.000 0.00 0.00 0.00 3.53
2081 2200 2.658593 GGATCGTGACGATGCCGG 60.659 66.667 26.42 0.00 47.00 6.13
2189 2310 8.707938 AACTTTATATACCGGTGTAAAGTCAC 57.292 34.615 32.02 0.00 43.03 3.67
2259 2380 8.204836 ACACTACTTGTCATCACTTTCTTAACT 58.795 33.333 0.00 0.00 29.79 2.24
2502 3123 8.188799 CGGACTTATTACATGAGTAAAGAGTCA 58.811 37.037 21.96 0.81 45.73 3.41
2563 3184 1.368641 GCATACGAAGGCATGTGTGA 58.631 50.000 0.00 0.00 31.14 3.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.