Multiple sequence alignment - TraesCS6A01G051200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G051200 chr6A 100.000 3488 0 0 1 3488 26716967 26720454 0.000000e+00 6442.0
1 TraesCS6A01G051200 chr6A 89.796 1568 145 11 964 2525 26734196 26735754 0.000000e+00 1995.0
2 TraesCS6A01G051200 chr6A 84.000 100 10 6 3333 3428 40221021 40220924 1.330000e-14 91.6
3 TraesCS6A01G051200 chr6B 93.490 1782 101 7 854 2634 46092710 46094477 0.000000e+00 2634.0
4 TraesCS6A01G051200 chr6B 92.265 1603 116 6 1036 2638 46072335 46073929 0.000000e+00 2266.0
5 TraesCS6A01G051200 chr6B 89.954 1533 151 1 993 2522 45983437 45984969 0.000000e+00 1975.0
6 TraesCS6A01G051200 chr6B 87.753 1682 171 22 855 2525 46390063 46391720 0.000000e+00 1932.0
7 TraesCS6A01G051200 chr6B 90.185 540 50 3 2162 2701 46081997 46082533 0.000000e+00 701.0
8 TraesCS6A01G051200 chr6B 91.019 412 37 0 1036 1447 46026758 46027169 1.090000e-154 556.0
9 TraesCS6A01G051200 chr6B 85.287 435 37 16 3060 3488 46082541 46082954 1.160000e-114 424.0
10 TraesCS6A01G051200 chr6B 89.492 295 26 5 3061 3354 46094589 46094879 5.500000e-98 368.0
11 TraesCS6A01G051200 chr6B 88.535 157 11 2 2020 2169 46074173 46074329 2.140000e-42 183.0
12 TraesCS6A01G051200 chr6B 88.889 144 9 1 609 752 46092577 46092713 1.660000e-38 171.0
13 TraesCS6A01G051200 chrUn 88.705 1629 151 17 907 2525 95385239 95386844 0.000000e+00 1958.0
14 TraesCS6A01G051200 chrUn 83.051 118 15 5 747 861 63620316 63620201 6.160000e-18 102.0
15 TraesCS6A01G051200 chr7D 95.183 602 28 1 1 601 126541078 126540477 0.000000e+00 950.0
16 TraesCS6A01G051200 chr7D 90.741 108 10 0 749 856 60693479 60693372 1.010000e-30 145.0
17 TraesCS6A01G051200 chr7D 81.416 113 18 3 749 859 35050741 35050630 4.800000e-14 89.8
18 TraesCS6A01G051200 chr4A 94.527 603 30 3 1 601 613656512 613655911 0.000000e+00 928.0
19 TraesCS6A01G051200 chr4A 93.023 602 41 1 1 601 163647651 163648252 0.000000e+00 878.0
20 TraesCS6A01G051200 chr1D 94.020 602 31 3 1 601 426614652 426614055 0.000000e+00 907.0
21 TraesCS6A01G051200 chr1D 89.560 364 38 0 2698 3061 343523090 343523453 2.450000e-126 462.0
22 TraesCS6A01G051200 chr1D 89.160 369 35 2 2694 3061 210582789 210583153 4.100000e-124 455.0
23 TraesCS6A01G051200 chr1D 88.770 374 38 2 2694 3066 419639054 419639424 4.100000e-124 455.0
24 TraesCS6A01G051200 chr1A 93.688 602 37 1 1 601 519996863 519997464 0.000000e+00 900.0
25 TraesCS6A01G051200 chr3A 93.909 591 35 1 12 601 237408597 237408007 0.000000e+00 891.0
26 TraesCS6A01G051200 chr3A 89.835 364 35 2 2699 3061 432235463 432235825 1.900000e-127 466.0
27 TraesCS6A01G051200 chr3A 88.235 119 12 2 749 866 511066845 511066728 1.310000e-29 141.0
28 TraesCS6A01G051200 chr2A 93.570 591 37 1 12 601 519857072 519857662 0.000000e+00 880.0
29 TraesCS6A01G051200 chr2A 92.691 602 43 1 1 601 112868395 112868996 0.000000e+00 867.0
30 TraesCS6A01G051200 chr2A 88.889 108 11 1 749 855 590983403 590983510 7.860000e-27 132.0
31 TraesCS6A01G051200 chr5A 92.751 607 42 2 1 605 565257038 565257644 0.000000e+00 876.0
32 TraesCS6A01G051200 chr5A 90.826 109 8 2 748 855 621222428 621222321 1.010000e-30 145.0
33 TraesCS6A01G051200 chr5A 82.667 75 9 3 3362 3436 665442783 665442853 2.910000e-06 63.9
34 TraesCS6A01G051200 chr6D 90.164 366 35 1 2697 3061 464399673 464399308 3.150000e-130 475.0
35 TraesCS6A01G051200 chr6D 89.617 366 34 2 2697 3061 449666017 449665655 2.450000e-126 462.0
36 TraesCS6A01G051200 chr4D 89.160 369 39 1 2694 3061 102158699 102159067 3.170000e-125 459.0
37 TraesCS6A01G051200 chr4B 89.589 365 33 4 2698 3061 135874156 135874516 3.170000e-125 459.0
38 TraesCS6A01G051200 chr2D 89.160 369 34 4 2697 3064 113605541 113605178 4.100000e-124 455.0
39 TraesCS6A01G051200 chr5B 84.259 108 16 1 749 855 426512663 426512770 1.710000e-18 104.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G051200 chr6A 26716967 26720454 3487 False 6442.000000 6442 100.000000 1 3488 1 chr6A.!!$F1 3487
1 TraesCS6A01G051200 chr6A 26734196 26735754 1558 False 1995.000000 1995 89.796000 964 2525 1 chr6A.!!$F2 1561
2 TraesCS6A01G051200 chr6B 45983437 45984969 1532 False 1975.000000 1975 89.954000 993 2522 1 chr6B.!!$F1 1529
3 TraesCS6A01G051200 chr6B 46390063 46391720 1657 False 1932.000000 1932 87.753000 855 2525 1 chr6B.!!$F3 1670
4 TraesCS6A01G051200 chr6B 46072335 46074329 1994 False 1224.500000 2266 90.400000 1036 2638 2 chr6B.!!$F4 1602
5 TraesCS6A01G051200 chr6B 46092577 46094879 2302 False 1057.666667 2634 90.623667 609 3354 3 chr6B.!!$F6 2745
6 TraesCS6A01G051200 chr6B 46081997 46082954 957 False 562.500000 701 87.736000 2162 3488 2 chr6B.!!$F5 1326
7 TraesCS6A01G051200 chrUn 95385239 95386844 1605 False 1958.000000 1958 88.705000 907 2525 1 chrUn.!!$F1 1618
8 TraesCS6A01G051200 chr7D 126540477 126541078 601 True 950.000000 950 95.183000 1 601 1 chr7D.!!$R3 600
9 TraesCS6A01G051200 chr4A 613655911 613656512 601 True 928.000000 928 94.527000 1 601 1 chr4A.!!$R1 600
10 TraesCS6A01G051200 chr4A 163647651 163648252 601 False 878.000000 878 93.023000 1 601 1 chr4A.!!$F1 600
11 TraesCS6A01G051200 chr1D 426614055 426614652 597 True 907.000000 907 94.020000 1 601 1 chr1D.!!$R1 600
12 TraesCS6A01G051200 chr1A 519996863 519997464 601 False 900.000000 900 93.688000 1 601 1 chr1A.!!$F1 600
13 TraesCS6A01G051200 chr3A 237408007 237408597 590 True 891.000000 891 93.909000 12 601 1 chr3A.!!$R1 589
14 TraesCS6A01G051200 chr2A 519857072 519857662 590 False 880.000000 880 93.570000 12 601 1 chr2A.!!$F2 589
15 TraesCS6A01G051200 chr2A 112868395 112868996 601 False 867.000000 867 92.691000 1 601 1 chr2A.!!$F1 600
16 TraesCS6A01G051200 chr5A 565257038 565257644 606 False 876.000000 876 92.751000 1 605 1 chr5A.!!$F1 604

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
729 731 0.038343 TTGTCCGGCCGTAGTACAAC 60.038 55.0 26.12 10.4 0.0 3.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2675 2821 0.111061 TCCACTCAAGGCACATTGCT 59.889 50.0 0.0 0.0 44.28 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
161 162 2.841215 CCGGCAAGGGATTACGATAAA 58.159 47.619 0.00 0.00 35.97 1.40
231 232 4.330944 TTGCTAGTTCGAGAGTTGGAAA 57.669 40.909 0.00 0.00 0.00 3.13
345 346 6.530601 AGCTATGGTTGGTTTAGGGAATAT 57.469 37.500 0.00 0.00 0.00 1.28
466 468 5.105351 CCATAGACGCAATCTCATACCCATA 60.105 44.000 0.00 0.00 39.04 2.74
467 469 4.527509 AGACGCAATCTCATACCCATAG 57.472 45.455 0.00 0.00 28.16 2.23
468 470 3.898123 AGACGCAATCTCATACCCATAGT 59.102 43.478 0.00 0.00 28.16 2.12
492 494 9.209048 AGTCTACCCATATATTTTGCGGATATA 57.791 33.333 0.00 0.00 0.00 0.86
506 508 5.525484 TGCGGATATAGATACCCATTACCT 58.475 41.667 0.00 0.00 0.00 3.08
525 527 8.966868 CATTACCTATGGGTACAAAATCTTGTT 58.033 33.333 7.60 0.00 46.62 2.83
535 537 7.255486 GGGTACAAAATCTTGTTAAGTCTTGCT 60.255 37.037 0.00 0.00 43.45 3.91
579 581 2.967887 GGTACCCACGAATACCCATACT 59.032 50.000 0.00 0.00 35.71 2.12
604 606 1.322538 GCGAAATTGCCATCCCAGGT 61.323 55.000 0.00 0.00 0.00 4.00
605 607 2.021723 GCGAAATTGCCATCCCAGGTA 61.022 52.381 0.00 0.00 0.00 3.08
606 608 1.949525 CGAAATTGCCATCCCAGGTAG 59.050 52.381 0.00 0.00 0.00 3.18
607 609 2.683742 CGAAATTGCCATCCCAGGTAGT 60.684 50.000 0.00 0.00 0.00 2.73
617 619 1.918262 TCCCAGGTAGTACTCCTCGAA 59.082 52.381 0.00 0.00 32.37 3.71
618 620 2.092538 TCCCAGGTAGTACTCCTCGAAG 60.093 54.545 0.00 0.00 32.37 3.79
637 639 4.675114 CGAAGTGCCAAATTTGACTTGTAC 59.325 41.667 22.89 14.53 28.90 2.90
642 644 4.083565 GCCAAATTTGACTTGTACCCCTA 58.916 43.478 19.86 0.00 0.00 3.53
643 645 4.082408 GCCAAATTTGACTTGTACCCCTAC 60.082 45.833 19.86 0.00 0.00 3.18
644 646 4.461431 CCAAATTTGACTTGTACCCCTACC 59.539 45.833 19.86 0.00 0.00 3.18
645 647 4.311520 AATTTGACTTGTACCCCTACCC 57.688 45.455 0.00 0.00 0.00 3.69
646 648 1.660242 TTGACTTGTACCCCTACCCC 58.340 55.000 0.00 0.00 0.00 4.95
647 649 0.252835 TGACTTGTACCCCTACCCCC 60.253 60.000 0.00 0.00 0.00 5.40
648 650 0.043788 GACTTGTACCCCTACCCCCT 59.956 60.000 0.00 0.00 0.00 4.79
649 651 1.291939 GACTTGTACCCCTACCCCCTA 59.708 57.143 0.00 0.00 0.00 3.53
661 663 2.738938 CCCCCTACCTACCGTTGCC 61.739 68.421 0.00 0.00 0.00 4.52
688 690 4.922206 AGTGATGTTAACCATGACACCAT 58.078 39.130 2.48 0.00 39.83 3.55
693 695 6.374053 TGATGTTAACCATGACACCATACAAG 59.626 38.462 2.48 0.00 32.56 3.16
696 698 1.284785 ACCATGACACCATACAAGGGG 59.715 52.381 0.00 0.00 38.34 4.79
729 731 0.038343 TTGTCCGGCCGTAGTACAAC 60.038 55.000 26.12 10.40 0.00 3.32
752 754 4.511826 CCAAGTGAAGTGAACCAACTACTC 59.488 45.833 0.00 0.00 0.00 2.59
754 756 3.071167 AGTGAAGTGAACCAACTACTCCC 59.929 47.826 0.00 0.00 0.00 4.30
755 757 3.071167 GTGAAGTGAACCAACTACTCCCT 59.929 47.826 0.00 0.00 0.00 4.20
756 758 3.323979 TGAAGTGAACCAACTACTCCCTC 59.676 47.826 0.00 0.00 0.00 4.30
757 759 3.261818 AGTGAACCAACTACTCCCTCT 57.738 47.619 0.00 0.00 0.00 3.69
758 760 2.900546 AGTGAACCAACTACTCCCTCTG 59.099 50.000 0.00 0.00 0.00 3.35
759 761 1.623811 TGAACCAACTACTCCCTCTGC 59.376 52.381 0.00 0.00 0.00 4.26
760 762 1.903183 GAACCAACTACTCCCTCTGCT 59.097 52.381 0.00 0.00 0.00 4.24
761 763 1.562783 ACCAACTACTCCCTCTGCTC 58.437 55.000 0.00 0.00 0.00 4.26
762 764 1.203187 ACCAACTACTCCCTCTGCTCA 60.203 52.381 0.00 0.00 0.00 4.26
763 765 2.114616 CCAACTACTCCCTCTGCTCAT 58.885 52.381 0.00 0.00 0.00 2.90
764 766 2.503356 CCAACTACTCCCTCTGCTCATT 59.497 50.000 0.00 0.00 0.00 2.57
765 767 3.054802 CCAACTACTCCCTCTGCTCATTT 60.055 47.826 0.00 0.00 0.00 2.32
766 768 4.566488 CCAACTACTCCCTCTGCTCATTTT 60.566 45.833 0.00 0.00 0.00 1.82
767 769 4.917906 ACTACTCCCTCTGCTCATTTTT 57.082 40.909 0.00 0.00 0.00 1.94
768 770 6.173339 CAACTACTCCCTCTGCTCATTTTTA 58.827 40.000 0.00 0.00 0.00 1.52
769 771 6.567602 ACTACTCCCTCTGCTCATTTTTAT 57.432 37.500 0.00 0.00 0.00 1.40
770 772 7.676683 ACTACTCCCTCTGCTCATTTTTATA 57.323 36.000 0.00 0.00 0.00 0.98
771 773 8.090788 ACTACTCCCTCTGCTCATTTTTATAA 57.909 34.615 0.00 0.00 0.00 0.98
772 774 8.207545 ACTACTCCCTCTGCTCATTTTTATAAG 58.792 37.037 0.00 0.00 0.00 1.73
773 775 6.963322 ACTCCCTCTGCTCATTTTTATAAGT 58.037 36.000 0.00 0.00 0.00 2.24
774 776 7.051000 ACTCCCTCTGCTCATTTTTATAAGTC 58.949 38.462 0.00 0.00 0.00 3.01
775 777 6.049149 TCCCTCTGCTCATTTTTATAAGTCG 58.951 40.000 0.00 0.00 0.00 4.18
776 778 5.817816 CCCTCTGCTCATTTTTATAAGTCGT 59.182 40.000 0.00 0.00 0.00 4.34
777 779 6.316390 CCCTCTGCTCATTTTTATAAGTCGTT 59.684 38.462 0.00 0.00 0.00 3.85
778 780 7.402640 CCTCTGCTCATTTTTATAAGTCGTTC 58.597 38.462 0.00 0.00 0.00 3.95
779 781 7.064609 CCTCTGCTCATTTTTATAAGTCGTTCA 59.935 37.037 0.00 0.00 0.00 3.18
780 782 7.963981 TCTGCTCATTTTTATAAGTCGTTCAG 58.036 34.615 0.00 0.00 0.00 3.02
781 783 7.817478 TCTGCTCATTTTTATAAGTCGTTCAGA 59.183 33.333 0.00 0.00 0.00 3.27
803 805 8.719478 CAGACAACTGAAAATAAGCTACTTTG 57.281 34.615 0.00 0.00 46.03 2.77
804 806 7.324616 CAGACAACTGAAAATAAGCTACTTTGC 59.675 37.037 0.00 0.00 46.03 3.68
805 807 7.013274 AGACAACTGAAAATAAGCTACTTTGCA 59.987 33.333 0.00 0.00 34.99 4.08
806 808 7.661040 ACAACTGAAAATAAGCTACTTTGCAT 58.339 30.769 2.84 0.00 34.99 3.96
807 809 7.809806 ACAACTGAAAATAAGCTACTTTGCATC 59.190 33.333 2.84 0.00 34.99 3.91
808 810 7.452880 ACTGAAAATAAGCTACTTTGCATCA 57.547 32.000 2.84 0.09 34.99 3.07
809 811 8.059798 ACTGAAAATAAGCTACTTTGCATCAT 57.940 30.769 2.84 0.00 34.99 2.45
810 812 7.972277 ACTGAAAATAAGCTACTTTGCATCATG 59.028 33.333 2.84 0.00 34.99 3.07
811 813 7.829725 TGAAAATAAGCTACTTTGCATCATGT 58.170 30.769 0.00 0.00 34.99 3.21
812 814 7.970061 TGAAAATAAGCTACTTTGCATCATGTC 59.030 33.333 0.00 0.00 34.99 3.06
813 815 7.636150 AAATAAGCTACTTTGCATCATGTCT 57.364 32.000 0.00 0.00 34.99 3.41
814 816 8.737168 AAATAAGCTACTTTGCATCATGTCTA 57.263 30.769 0.00 0.00 34.99 2.59
815 817 8.737168 AATAAGCTACTTTGCATCATGTCTAA 57.263 30.769 0.00 0.00 34.99 2.10
816 818 8.737168 ATAAGCTACTTTGCATCATGTCTAAA 57.263 30.769 0.00 0.00 34.99 1.85
817 819 7.452880 AAGCTACTTTGCATCATGTCTAAAA 57.547 32.000 0.00 0.00 34.99 1.52
818 820 7.636150 AGCTACTTTGCATCATGTCTAAAAT 57.364 32.000 0.00 0.00 34.99 1.82
819 821 7.478322 AGCTACTTTGCATCATGTCTAAAATG 58.522 34.615 0.00 0.00 34.99 2.32
820 822 6.197842 GCTACTTTGCATCATGTCTAAAATGC 59.802 38.462 7.63 7.63 43.71 3.56
821 823 5.413499 ACTTTGCATCATGTCTAAAATGCC 58.587 37.500 11.10 0.00 42.98 4.40
822 824 5.186409 ACTTTGCATCATGTCTAAAATGCCT 59.814 36.000 11.10 0.00 42.98 4.75
823 825 5.664294 TTGCATCATGTCTAAAATGCCTT 57.336 34.783 11.10 0.00 42.98 4.35
824 826 5.252969 TGCATCATGTCTAAAATGCCTTC 57.747 39.130 11.10 0.00 42.98 3.46
825 827 4.705991 TGCATCATGTCTAAAATGCCTTCA 59.294 37.500 11.10 0.00 42.98 3.02
826 828 5.185442 TGCATCATGTCTAAAATGCCTTCAA 59.815 36.000 11.10 0.00 42.98 2.69
827 829 5.747197 GCATCATGTCTAAAATGCCTTCAAG 59.253 40.000 3.95 0.00 38.82 3.02
828 830 5.902613 TCATGTCTAAAATGCCTTCAAGG 57.097 39.130 0.00 0.00 38.80 3.61
846 848 9.143631 CCTTCAAGGCTTTATAAAAATGAACAG 57.856 33.333 0.00 0.00 0.00 3.16
847 849 9.912634 CTTCAAGGCTTTATAAAAATGAACAGA 57.087 29.630 0.00 0.00 0.00 3.41
848 850 9.912634 TTCAAGGCTTTATAAAAATGAACAGAG 57.087 29.630 0.00 0.00 0.00 3.35
849 851 8.522830 TCAAGGCTTTATAAAAATGAACAGAGG 58.477 33.333 0.00 0.00 0.00 3.69
850 852 7.410120 AGGCTTTATAAAAATGAACAGAGGG 57.590 36.000 0.00 0.00 0.00 4.30
851 853 7.182060 AGGCTTTATAAAAATGAACAGAGGGA 58.818 34.615 0.00 0.00 0.00 4.20
852 854 7.340487 AGGCTTTATAAAAATGAACAGAGGGAG 59.660 37.037 0.00 0.00 0.00 4.30
853 855 7.122799 GGCTTTATAAAAATGAACAGAGGGAGT 59.877 37.037 0.00 0.00 0.00 3.85
854 856 9.174166 GCTTTATAAAAATGAACAGAGGGAGTA 57.826 33.333 0.00 0.00 0.00 2.59
886 888 3.402628 TGAGGCAGAGTTAGTTCCAAC 57.597 47.619 0.00 0.00 0.00 3.77
887 889 2.972713 TGAGGCAGAGTTAGTTCCAACT 59.027 45.455 0.00 0.00 41.44 3.16
895 897 4.103311 AGAGTTAGTTCCAACTTCCAAGCT 59.897 41.667 0.00 0.00 38.86 3.74
903 905 2.294512 CCAACTTCCAAGCTCAAACTCC 59.705 50.000 0.00 0.00 0.00 3.85
926 928 2.418368 AGCAAAACACACCACTCTGA 57.582 45.000 0.00 0.00 0.00 3.27
945 954 1.022903 ATCTCCTCCCAACCCTCTCT 58.977 55.000 0.00 0.00 0.00 3.10
961 970 1.211703 TCTCTCACCAAAACACCAGCA 59.788 47.619 0.00 0.00 0.00 4.41
973 982 3.130160 CCAGCAAGCTCTTCGGCC 61.130 66.667 0.00 0.00 0.00 6.13
1034 1043 2.028385 CAGGTAACCAGAAACCGCTACT 60.028 50.000 0.00 0.00 40.88 2.57
1337 1346 4.143333 CGTCCGGAACATCGCCCT 62.143 66.667 5.23 0.00 0.00 5.19
1791 1818 2.029964 GTCGGCGTGAACTGGGAA 59.970 61.111 6.85 0.00 0.00 3.97
1860 1887 1.137479 TCCGTGGTCTTTCTGTCGTTT 59.863 47.619 0.00 0.00 0.00 3.60
1865 1892 1.871676 GGTCTTTCTGTCGTTTGGGAC 59.128 52.381 0.00 0.00 37.45 4.46
1997 2024 3.702048 CTTCTTCGGGACCGGGCA 61.702 66.667 11.00 0.00 40.25 5.36
2007 2034 1.627297 GGACCGGGCAAGGAGAAGAT 61.627 60.000 11.00 0.00 34.73 2.40
2012 2045 0.462759 GGGCAAGGAGAAGATGACGG 60.463 60.000 0.00 0.00 0.00 4.79
2361 2403 0.179156 GGGACGAAGCAACGACGATA 60.179 55.000 0.00 0.00 37.03 2.92
2402 2444 1.274447 CAGAGACAGAGCCACACATGA 59.726 52.381 0.00 0.00 0.00 3.07
2454 2496 4.711846 ACACTAGCCAAGATCACAGATGTA 59.288 41.667 0.00 0.00 0.00 2.29
2594 2636 7.094248 CCAACATGTGATTGAATGGTTAAGAGA 60.094 37.037 0.00 0.00 0.00 3.10
2598 2640 7.439157 TGTGATTGAATGGTTAAGAGAACAG 57.561 36.000 0.00 0.00 0.00 3.16
2601 2643 7.173218 GTGATTGAATGGTTAAGAGAACAGTGA 59.827 37.037 0.00 0.00 0.00 3.41
2616 2658 7.829211 AGAGAACAGTGATATCTCTAGCCTATC 59.171 40.741 19.26 2.59 46.05 2.08
2618 2660 7.611467 AGAACAGTGATATCTCTAGCCTATCAG 59.389 40.741 6.97 0.00 33.70 2.90
2630 2708 6.191315 TCTAGCCTATCAGAAGTTCAAGTCT 58.809 40.000 5.50 0.00 0.00 3.24
2632 2710 5.486526 AGCCTATCAGAAGTTCAAGTCTTG 58.513 41.667 6.21 6.21 0.00 3.02
2675 2821 8.624367 TTCTTTATTTATTTCACACCTTCCGA 57.376 30.769 0.00 0.00 0.00 4.55
2678 2824 3.410631 TTATTTCACACCTTCCGAGCA 57.589 42.857 0.00 0.00 0.00 4.26
2688 2834 0.169672 CTTCCGAGCAATGTGCCTTG 59.830 55.000 0.00 0.00 46.52 3.61
2701 2847 2.237143 TGTGCCTTGAGTGGAAGGATAG 59.763 50.000 3.42 0.00 44.87 2.08
2702 2848 2.501723 GTGCCTTGAGTGGAAGGATAGA 59.498 50.000 3.42 0.00 44.87 1.98
2703 2849 3.055094 GTGCCTTGAGTGGAAGGATAGAA 60.055 47.826 3.42 0.00 44.87 2.10
2704 2850 3.587061 TGCCTTGAGTGGAAGGATAGAAA 59.413 43.478 3.42 0.00 44.87 2.52
2705 2851 4.042809 TGCCTTGAGTGGAAGGATAGAAAA 59.957 41.667 3.42 0.00 44.87 2.29
2707 2853 6.069673 TGCCTTGAGTGGAAGGATAGAAAATA 60.070 38.462 3.42 0.00 44.87 1.40
2708 2854 6.828785 GCCTTGAGTGGAAGGATAGAAAATAA 59.171 38.462 3.42 0.00 44.87 1.40
2709 2855 7.339466 GCCTTGAGTGGAAGGATAGAAAATAAA 59.661 37.037 3.42 0.00 44.87 1.40
2710 2856 8.678199 CCTTGAGTGGAAGGATAGAAAATAAAC 58.322 37.037 0.00 0.00 44.87 2.01
2711 2857 9.454859 CTTGAGTGGAAGGATAGAAAATAAACT 57.545 33.333 0.00 0.00 0.00 2.66
2715 2861 9.853177 AGTGGAAGGATAGAAAATAAACTATGG 57.147 33.333 0.00 0.00 30.74 2.74
2716 2862 9.628500 GTGGAAGGATAGAAAATAAACTATGGT 57.372 33.333 0.00 0.00 30.74 3.55
2738 2884 7.708998 TGGTAATTTTGTAAAAGGATATCCGC 58.291 34.615 16.21 6.29 42.08 5.54
2739 2885 7.339721 TGGTAATTTTGTAAAAGGATATCCGCA 59.660 33.333 16.21 8.63 42.08 5.69
2740 2886 7.646526 GGTAATTTTGTAAAAGGATATCCGCAC 59.353 37.037 16.21 12.35 42.08 5.34
2741 2887 5.570234 TTTTGTAAAAGGATATCCGCACC 57.430 39.130 16.21 5.47 42.08 5.01
2742 2888 4.497291 TTGTAAAAGGATATCCGCACCT 57.503 40.909 16.21 3.48 42.08 4.00
2743 2889 4.067972 TGTAAAAGGATATCCGCACCTC 57.932 45.455 16.21 7.38 42.08 3.85
2744 2890 3.709653 TGTAAAAGGATATCCGCACCTCT 59.290 43.478 16.21 0.00 42.08 3.69
2745 2891 3.477210 AAAAGGATATCCGCACCTCTC 57.523 47.619 16.21 0.00 42.08 3.20
2746 2892 2.390225 AAGGATATCCGCACCTCTCT 57.610 50.000 16.21 0.00 42.08 3.10
2747 2893 2.390225 AGGATATCCGCACCTCTCTT 57.610 50.000 16.21 0.00 42.08 2.85
2748 2894 2.243810 AGGATATCCGCACCTCTCTTC 58.756 52.381 16.21 0.00 42.08 2.87
2749 2895 1.964223 GGATATCCGCACCTCTCTTCA 59.036 52.381 5.86 0.00 0.00 3.02
2750 2896 2.564947 GGATATCCGCACCTCTCTTCAT 59.435 50.000 5.86 0.00 0.00 2.57
2751 2897 3.764434 GGATATCCGCACCTCTCTTCATA 59.236 47.826 5.86 0.00 0.00 2.15
2752 2898 4.404073 GGATATCCGCACCTCTCTTCATAT 59.596 45.833 5.86 0.00 0.00 1.78
2753 2899 5.105146 GGATATCCGCACCTCTCTTCATATT 60.105 44.000 5.86 0.00 0.00 1.28
2754 2900 4.696479 ATCCGCACCTCTCTTCATATTT 57.304 40.909 0.00 0.00 0.00 1.40
2755 2901 5.808366 ATCCGCACCTCTCTTCATATTTA 57.192 39.130 0.00 0.00 0.00 1.40
2756 2902 4.945246 TCCGCACCTCTCTTCATATTTAC 58.055 43.478 0.00 0.00 0.00 2.01
2757 2903 4.404394 TCCGCACCTCTCTTCATATTTACA 59.596 41.667 0.00 0.00 0.00 2.41
2758 2904 4.747108 CCGCACCTCTCTTCATATTTACAG 59.253 45.833 0.00 0.00 0.00 2.74
2759 2905 5.451937 CCGCACCTCTCTTCATATTTACAGA 60.452 44.000 0.00 0.00 0.00 3.41
2760 2906 6.219473 CGCACCTCTCTTCATATTTACAGAT 58.781 40.000 0.00 0.00 0.00 2.90
2761 2907 7.371159 CGCACCTCTCTTCATATTTACAGATA 58.629 38.462 0.00 0.00 0.00 1.98
2762 2908 7.867909 CGCACCTCTCTTCATATTTACAGATAA 59.132 37.037 0.00 0.00 0.00 1.75
2763 2909 9.202273 GCACCTCTCTTCATATTTACAGATAAG 57.798 37.037 0.00 0.00 0.00 1.73
2764 2910 9.703892 CACCTCTCTTCATATTTACAGATAAGG 57.296 37.037 0.00 0.00 0.00 2.69
2765 2911 8.371699 ACCTCTCTTCATATTTACAGATAAGGC 58.628 37.037 0.00 0.00 0.00 4.35
2766 2912 7.821846 CCTCTCTTCATATTTACAGATAAGGCC 59.178 40.741 0.00 0.00 0.00 5.19
2767 2913 7.378966 TCTCTTCATATTTACAGATAAGGCCG 58.621 38.462 0.00 0.00 0.00 6.13
2768 2914 7.015292 TCTCTTCATATTTACAGATAAGGCCGT 59.985 37.037 0.00 0.00 0.00 5.68
2769 2915 7.152645 TCTTCATATTTACAGATAAGGCCGTC 58.847 38.462 0.00 0.00 0.00 4.79
2770 2916 6.665992 TCATATTTACAGATAAGGCCGTCT 57.334 37.500 0.00 0.00 0.00 4.18
2771 2917 7.062749 TCATATTTACAGATAAGGCCGTCTT 57.937 36.000 0.00 0.00 39.40 3.01
2772 2918 7.506114 TCATATTTACAGATAAGGCCGTCTTT 58.494 34.615 0.00 0.00 36.93 2.52
2773 2919 7.656137 TCATATTTACAGATAAGGCCGTCTTTC 59.344 37.037 0.00 0.00 36.93 2.62
2774 2920 4.811969 TTACAGATAAGGCCGTCTTTCA 57.188 40.909 0.00 0.00 36.93 2.69
2775 2921 3.914426 ACAGATAAGGCCGTCTTTCAT 57.086 42.857 0.00 0.00 36.93 2.57
2776 2922 4.222124 ACAGATAAGGCCGTCTTTCATT 57.778 40.909 0.00 0.00 36.93 2.57
2777 2923 4.192317 ACAGATAAGGCCGTCTTTCATTC 58.808 43.478 0.00 0.00 36.93 2.67
2778 2924 4.191544 CAGATAAGGCCGTCTTTCATTCA 58.808 43.478 0.00 0.00 36.93 2.57
2779 2925 4.818546 CAGATAAGGCCGTCTTTCATTCAT 59.181 41.667 0.00 0.00 36.93 2.57
2780 2926 5.049818 CAGATAAGGCCGTCTTTCATTCATC 60.050 44.000 0.00 0.00 36.93 2.92
2781 2927 2.044123 AGGCCGTCTTTCATTCATCC 57.956 50.000 0.00 0.00 0.00 3.51
2782 2928 1.561542 AGGCCGTCTTTCATTCATCCT 59.438 47.619 0.00 0.00 0.00 3.24
2783 2929 2.025887 AGGCCGTCTTTCATTCATCCTT 60.026 45.455 0.00 0.00 0.00 3.36
2784 2930 3.199946 AGGCCGTCTTTCATTCATCCTTA 59.800 43.478 0.00 0.00 0.00 2.69
2785 2931 4.137543 GGCCGTCTTTCATTCATCCTTAT 58.862 43.478 0.00 0.00 0.00 1.73
2786 2932 4.580580 GGCCGTCTTTCATTCATCCTTATT 59.419 41.667 0.00 0.00 0.00 1.40
2787 2933 5.067805 GGCCGTCTTTCATTCATCCTTATTT 59.932 40.000 0.00 0.00 0.00 1.40
2788 2934 6.202226 GCCGTCTTTCATTCATCCTTATTTC 58.798 40.000 0.00 0.00 0.00 2.17
2789 2935 6.729187 CCGTCTTTCATTCATCCTTATTTCC 58.271 40.000 0.00 0.00 0.00 3.13
2790 2936 6.238759 CCGTCTTTCATTCATCCTTATTTCCC 60.239 42.308 0.00 0.00 0.00 3.97
2791 2937 6.318648 CGTCTTTCATTCATCCTTATTTCCCA 59.681 38.462 0.00 0.00 0.00 4.37
2792 2938 7.484140 GTCTTTCATTCATCCTTATTTCCCAC 58.516 38.462 0.00 0.00 0.00 4.61
2793 2939 7.122650 GTCTTTCATTCATCCTTATTTCCCACA 59.877 37.037 0.00 0.00 0.00 4.17
2794 2940 7.673504 TCTTTCATTCATCCTTATTTCCCACAA 59.326 33.333 0.00 0.00 0.00 3.33
2795 2941 6.773976 TCATTCATCCTTATTTCCCACAAC 57.226 37.500 0.00 0.00 0.00 3.32
2796 2942 5.656416 TCATTCATCCTTATTTCCCACAACC 59.344 40.000 0.00 0.00 0.00 3.77
2797 2943 4.946160 TCATCCTTATTTCCCACAACCT 57.054 40.909 0.00 0.00 0.00 3.50
2798 2944 4.855340 TCATCCTTATTTCCCACAACCTC 58.145 43.478 0.00 0.00 0.00 3.85
2799 2945 4.290985 TCATCCTTATTTCCCACAACCTCA 59.709 41.667 0.00 0.00 0.00 3.86
2800 2946 4.946160 TCCTTATTTCCCACAACCTCAT 57.054 40.909 0.00 0.00 0.00 2.90
2801 2947 5.269554 TCCTTATTTCCCACAACCTCATT 57.730 39.130 0.00 0.00 0.00 2.57
2802 2948 5.016173 TCCTTATTTCCCACAACCTCATTG 58.984 41.667 0.00 0.00 44.60 2.82
2816 2962 7.712264 CAACCTCATTGTTGAGCAATTAAAA 57.288 32.000 0.00 0.00 46.77 1.52
2817 2963 8.140677 CAACCTCATTGTTGAGCAATTAAAAA 57.859 30.769 0.00 0.00 46.77 1.94
2837 2983 4.607293 AAAAGAAGCCTTTGGACCAATC 57.393 40.909 7.99 2.00 41.46 2.67
2838 2984 3.532641 AAGAAGCCTTTGGACCAATCT 57.467 42.857 7.99 4.56 0.00 2.40
2839 2985 2.800250 AGAAGCCTTTGGACCAATCTG 58.200 47.619 7.99 0.82 0.00 2.90
2840 2986 1.821136 GAAGCCTTTGGACCAATCTGG 59.179 52.381 7.99 11.72 45.02 3.86
2841 2987 0.613012 AGCCTTTGGACCAATCTGGC 60.613 55.000 26.18 26.18 42.67 4.85
2842 2988 0.899717 GCCTTTGGACCAATCTGGCA 60.900 55.000 27.47 7.46 42.67 4.92
2843 2989 1.856629 CCTTTGGACCAATCTGGCAT 58.143 50.000 7.99 0.00 42.67 4.40
2844 2990 1.479323 CCTTTGGACCAATCTGGCATG 59.521 52.381 7.99 0.00 42.67 4.06
2845 2991 2.173519 CTTTGGACCAATCTGGCATGT 58.826 47.619 7.99 0.00 42.67 3.21
2846 2992 2.307496 TTGGACCAATCTGGCATGTT 57.693 45.000 1.69 0.00 42.67 2.71
2847 2993 1.548081 TGGACCAATCTGGCATGTTG 58.452 50.000 0.00 5.33 42.67 3.33
2848 2994 0.819582 GGACCAATCTGGCATGTTGG 59.180 55.000 22.28 22.28 42.67 3.77
2849 2995 0.174162 GACCAATCTGGCATGTTGGC 59.826 55.000 23.27 15.46 44.86 4.52
2869 3015 2.969238 CTGCCGGCGTCATCCATC 60.969 66.667 23.90 0.00 0.00 3.51
2870 3016 4.545706 TGCCGGCGTCATCCATCC 62.546 66.667 23.90 0.00 0.00 3.51
2872 3018 3.860605 CCGGCGTCATCCATCCCA 61.861 66.667 6.01 0.00 0.00 4.37
2873 3019 2.427320 CGGCGTCATCCATCCCAT 59.573 61.111 0.00 0.00 0.00 4.00
2874 3020 1.962822 CGGCGTCATCCATCCCATG 60.963 63.158 0.00 0.00 0.00 3.66
2875 3021 2.263741 GGCGTCATCCATCCCATGC 61.264 63.158 0.00 0.00 0.00 4.06
2876 3022 2.263741 GCGTCATCCATCCCATGCC 61.264 63.158 0.00 0.00 0.00 4.40
2877 3023 1.453235 CGTCATCCATCCCATGCCT 59.547 57.895 0.00 0.00 0.00 4.75
2878 3024 0.179009 CGTCATCCATCCCATGCCTT 60.179 55.000 0.00 0.00 0.00 4.35
2879 3025 1.613836 GTCATCCATCCCATGCCTTC 58.386 55.000 0.00 0.00 0.00 3.46
2880 3026 0.109153 TCATCCATCCCATGCCTTCG 59.891 55.000 0.00 0.00 0.00 3.79
2881 3027 1.228367 ATCCATCCCATGCCTTCGC 60.228 57.895 0.00 0.00 0.00 4.70
2882 3028 1.713005 ATCCATCCCATGCCTTCGCT 61.713 55.000 0.00 0.00 35.36 4.93
2883 3029 1.895707 CCATCCCATGCCTTCGCTC 60.896 63.158 0.00 0.00 35.36 5.03
2884 3030 1.153107 CATCCCATGCCTTCGCTCA 60.153 57.895 0.00 0.00 35.36 4.26
2885 3031 1.147824 ATCCCATGCCTTCGCTCAG 59.852 57.895 0.00 0.00 35.36 3.35
2886 3032 1.630126 ATCCCATGCCTTCGCTCAGT 61.630 55.000 0.00 0.00 35.36 3.41
2887 3033 1.817099 CCCATGCCTTCGCTCAGTC 60.817 63.158 0.00 0.00 35.36 3.51
2888 3034 1.817099 CCATGCCTTCGCTCAGTCC 60.817 63.158 0.00 0.00 35.36 3.85
2889 3035 2.169789 CATGCCTTCGCTCAGTCCG 61.170 63.158 0.00 0.00 35.36 4.79
2890 3036 2.351244 ATGCCTTCGCTCAGTCCGA 61.351 57.895 0.00 0.00 35.36 4.55
2891 3037 2.507324 GCCTTCGCTCAGTCCGAC 60.507 66.667 0.00 0.00 34.01 4.79
2892 3038 2.182030 CCTTCGCTCAGTCCGACC 59.818 66.667 0.00 0.00 34.01 4.79
2893 3039 2.636412 CCTTCGCTCAGTCCGACCA 61.636 63.158 0.00 0.00 34.01 4.02
2894 3040 1.444553 CTTCGCTCAGTCCGACCAC 60.445 63.158 0.00 0.00 34.01 4.16
2895 3041 2.820767 CTTCGCTCAGTCCGACCACC 62.821 65.000 0.00 0.00 34.01 4.61
2896 3042 3.680786 CGCTCAGTCCGACCACCA 61.681 66.667 0.00 0.00 0.00 4.17
2897 3043 2.741092 GCTCAGTCCGACCACCAA 59.259 61.111 0.00 0.00 0.00 3.67
2898 3044 1.296715 GCTCAGTCCGACCACCAAT 59.703 57.895 0.00 0.00 0.00 3.16
2899 3045 0.741221 GCTCAGTCCGACCACCAATC 60.741 60.000 0.00 0.00 0.00 2.67
2900 3046 0.608130 CTCAGTCCGACCACCAATCA 59.392 55.000 0.00 0.00 0.00 2.57
2901 3047 0.320374 TCAGTCCGACCACCAATCAC 59.680 55.000 0.00 0.00 0.00 3.06
2902 3048 0.673644 CAGTCCGACCACCAATCACC 60.674 60.000 0.00 0.00 0.00 4.02
2903 3049 1.125093 AGTCCGACCACCAATCACCA 61.125 55.000 0.00 0.00 0.00 4.17
2904 3050 0.953960 GTCCGACCACCAATCACCAC 60.954 60.000 0.00 0.00 0.00 4.16
2905 3051 1.674322 CCGACCACCAATCACCACC 60.674 63.158 0.00 0.00 0.00 4.61
2906 3052 1.072332 CGACCACCAATCACCACCA 59.928 57.895 0.00 0.00 0.00 4.17
2907 3053 1.234615 CGACCACCAATCACCACCAC 61.235 60.000 0.00 0.00 0.00 4.16
2908 3054 1.228124 ACCACCAATCACCACCACG 60.228 57.895 0.00 0.00 0.00 4.94
2909 3055 2.625823 CCACCAATCACCACCACGC 61.626 63.158 0.00 0.00 0.00 5.34
2910 3056 2.282180 ACCAATCACCACCACGCC 60.282 61.111 0.00 0.00 0.00 5.68
2911 3057 3.061848 CCAATCACCACCACGCCC 61.062 66.667 0.00 0.00 0.00 6.13
2912 3058 3.061848 CAATCACCACCACGCCCC 61.062 66.667 0.00 0.00 0.00 5.80
2913 3059 3.575247 AATCACCACCACGCCCCA 61.575 61.111 0.00 0.00 0.00 4.96
2914 3060 3.860930 AATCACCACCACGCCCCAC 62.861 63.158 0.00 0.00 0.00 4.61
2916 3062 4.579384 CACCACCACGCCCCACTT 62.579 66.667 0.00 0.00 0.00 3.16
2917 3063 4.265056 ACCACCACGCCCCACTTC 62.265 66.667 0.00 0.00 0.00 3.01
2918 3064 3.953775 CCACCACGCCCCACTTCT 61.954 66.667 0.00 0.00 0.00 2.85
2919 3065 2.358737 CACCACGCCCCACTTCTC 60.359 66.667 0.00 0.00 0.00 2.87
2920 3066 3.637273 ACCACGCCCCACTTCTCC 61.637 66.667 0.00 0.00 0.00 3.71
2921 3067 3.322466 CCACGCCCCACTTCTCCT 61.322 66.667 0.00 0.00 0.00 3.69
2922 3068 2.266055 CACGCCCCACTTCTCCTC 59.734 66.667 0.00 0.00 0.00 3.71
2923 3069 2.203788 ACGCCCCACTTCTCCTCA 60.204 61.111 0.00 0.00 0.00 3.86
2924 3070 2.266055 CGCCCCACTTCTCCTCAC 59.734 66.667 0.00 0.00 0.00 3.51
2925 3071 2.671682 GCCCCACTTCTCCTCACC 59.328 66.667 0.00 0.00 0.00 4.02
2926 3072 1.920835 GCCCCACTTCTCCTCACCT 60.921 63.158 0.00 0.00 0.00 4.00
2927 3073 1.492993 GCCCCACTTCTCCTCACCTT 61.493 60.000 0.00 0.00 0.00 3.50
2928 3074 1.952621 CCCCACTTCTCCTCACCTTA 58.047 55.000 0.00 0.00 0.00 2.69
2929 3075 2.482494 CCCCACTTCTCCTCACCTTAT 58.518 52.381 0.00 0.00 0.00 1.73
2930 3076 2.436173 CCCCACTTCTCCTCACCTTATC 59.564 54.545 0.00 0.00 0.00 1.75
2931 3077 3.107601 CCCACTTCTCCTCACCTTATCA 58.892 50.000 0.00 0.00 0.00 2.15
2932 3078 3.118592 CCCACTTCTCCTCACCTTATCAC 60.119 52.174 0.00 0.00 0.00 3.06
2933 3079 3.772025 CCACTTCTCCTCACCTTATCACT 59.228 47.826 0.00 0.00 0.00 3.41
2934 3080 4.142049 CCACTTCTCCTCACCTTATCACTC 60.142 50.000 0.00 0.00 0.00 3.51
2935 3081 4.027437 ACTTCTCCTCACCTTATCACTCC 58.973 47.826 0.00 0.00 0.00 3.85
2936 3082 4.264623 ACTTCTCCTCACCTTATCACTCCT 60.265 45.833 0.00 0.00 0.00 3.69
2937 3083 3.904717 TCTCCTCACCTTATCACTCCTC 58.095 50.000 0.00 0.00 0.00 3.71
2938 3084 3.529734 TCTCCTCACCTTATCACTCCTCT 59.470 47.826 0.00 0.00 0.00 3.69
2939 3085 4.017037 TCTCCTCACCTTATCACTCCTCTT 60.017 45.833 0.00 0.00 0.00 2.85
2940 3086 4.689062 TCCTCACCTTATCACTCCTCTTT 58.311 43.478 0.00 0.00 0.00 2.52
2941 3087 4.712337 TCCTCACCTTATCACTCCTCTTTC 59.288 45.833 0.00 0.00 0.00 2.62
2942 3088 4.714308 CCTCACCTTATCACTCCTCTTTCT 59.286 45.833 0.00 0.00 0.00 2.52
2943 3089 5.163457 CCTCACCTTATCACTCCTCTTTCTC 60.163 48.000 0.00 0.00 0.00 2.87
2944 3090 5.584913 TCACCTTATCACTCCTCTTTCTCT 58.415 41.667 0.00 0.00 0.00 3.10
2945 3091 6.732487 TCACCTTATCACTCCTCTTTCTCTA 58.268 40.000 0.00 0.00 0.00 2.43
2946 3092 6.831353 TCACCTTATCACTCCTCTTTCTCTAG 59.169 42.308 0.00 0.00 0.00 2.43
2947 3093 6.831353 CACCTTATCACTCCTCTTTCTCTAGA 59.169 42.308 0.00 0.00 0.00 2.43
2948 3094 7.505585 CACCTTATCACTCCTCTTTCTCTAGAT 59.494 40.741 0.00 0.00 0.00 1.98
2949 3095 8.729047 ACCTTATCACTCCTCTTTCTCTAGATA 58.271 37.037 0.00 0.00 0.00 1.98
2950 3096 9.753674 CCTTATCACTCCTCTTTCTCTAGATAT 57.246 37.037 0.00 0.00 0.00 1.63
2954 3100 9.827198 ATCACTCCTCTTTCTCTAGATATCATT 57.173 33.333 5.32 0.00 0.00 2.57
2979 3125 7.462571 AGTTTTTACACATGGAATTACTCCC 57.537 36.000 0.00 0.00 44.69 4.30
2980 3126 6.150474 AGTTTTTACACATGGAATTACTCCCG 59.850 38.462 0.00 0.00 44.69 5.14
2981 3127 2.038387 ACACATGGAATTACTCCCGC 57.962 50.000 0.00 0.00 44.69 6.13
2982 3128 1.280710 ACACATGGAATTACTCCCGCA 59.719 47.619 0.00 0.00 44.69 5.69
2983 3129 2.092429 ACACATGGAATTACTCCCGCAT 60.092 45.455 0.00 0.00 44.69 4.73
2984 3130 2.291465 CACATGGAATTACTCCCGCATG 59.709 50.000 0.00 0.00 44.69 4.06
2985 3131 2.172505 ACATGGAATTACTCCCGCATGA 59.827 45.455 0.00 0.00 44.69 3.07
2986 3132 2.620251 TGGAATTACTCCCGCATGAG 57.380 50.000 0.00 0.00 44.69 2.90
2987 3133 1.837439 TGGAATTACTCCCGCATGAGT 59.163 47.619 9.76 9.76 44.69 3.41
2988 3134 2.158957 TGGAATTACTCCCGCATGAGTC 60.159 50.000 8.29 0.00 44.30 3.36
2989 3135 2.158957 GGAATTACTCCCGCATGAGTCA 60.159 50.000 8.29 0.00 44.30 3.41
2990 3136 3.531538 GAATTACTCCCGCATGAGTCAA 58.468 45.455 8.29 3.63 44.30 3.18
2991 3137 3.845781 ATTACTCCCGCATGAGTCAAT 57.154 42.857 8.29 5.40 44.30 2.57
2992 3138 2.890808 TACTCCCGCATGAGTCAATC 57.109 50.000 8.29 0.00 44.30 2.67
2993 3139 0.904649 ACTCCCGCATGAGTCAATCA 59.095 50.000 0.00 0.00 41.75 2.57
2994 3140 1.134580 ACTCCCGCATGAGTCAATCAG 60.135 52.381 0.00 0.00 41.75 2.90
2995 3141 1.137675 CTCCCGCATGAGTCAATCAGA 59.862 52.381 0.00 0.00 42.53 3.27
2996 3142 1.554617 TCCCGCATGAGTCAATCAGAA 59.445 47.619 0.00 0.00 42.53 3.02
2997 3143 1.667724 CCCGCATGAGTCAATCAGAAC 59.332 52.381 0.00 0.00 42.53 3.01
2998 3144 2.349590 CCGCATGAGTCAATCAGAACA 58.650 47.619 0.00 0.00 42.53 3.18
2999 3145 2.350804 CCGCATGAGTCAATCAGAACAG 59.649 50.000 0.00 0.00 42.53 3.16
3000 3146 2.350804 CGCATGAGTCAATCAGAACAGG 59.649 50.000 0.00 0.00 42.53 4.00
3001 3147 3.341823 GCATGAGTCAATCAGAACAGGT 58.658 45.455 0.00 0.00 42.53 4.00
3002 3148 3.126514 GCATGAGTCAATCAGAACAGGTG 59.873 47.826 0.00 0.00 42.53 4.00
3003 3149 4.321718 CATGAGTCAATCAGAACAGGTGT 58.678 43.478 0.00 0.00 42.53 4.16
3004 3150 4.422073 TGAGTCAATCAGAACAGGTGTT 57.578 40.909 0.00 0.00 35.21 3.32
3005 3151 4.780815 TGAGTCAATCAGAACAGGTGTTT 58.219 39.130 0.00 0.00 33.56 2.83
3006 3152 5.192927 TGAGTCAATCAGAACAGGTGTTTT 58.807 37.500 0.00 0.00 33.56 2.43
3007 3153 5.066375 TGAGTCAATCAGAACAGGTGTTTTG 59.934 40.000 6.98 6.98 40.31 2.44
3008 3154 4.949856 AGTCAATCAGAACAGGTGTTTTGT 59.050 37.500 11.82 0.00 40.00 2.83
3009 3155 5.036737 GTCAATCAGAACAGGTGTTTTGTG 58.963 41.667 11.82 5.75 40.00 3.33
3010 3156 4.946772 TCAATCAGAACAGGTGTTTTGTGA 59.053 37.500 11.82 7.58 40.00 3.58
3011 3157 5.417266 TCAATCAGAACAGGTGTTTTGTGAA 59.583 36.000 11.82 0.00 40.00 3.18
3012 3158 5.913137 ATCAGAACAGGTGTTTTGTGAAA 57.087 34.783 11.82 0.00 40.00 2.69
3013 3159 5.713792 TCAGAACAGGTGTTTTGTGAAAA 57.286 34.783 11.82 0.00 40.00 2.29
3014 3160 6.090483 TCAGAACAGGTGTTTTGTGAAAAA 57.910 33.333 11.82 0.00 40.00 1.94
3036 3182 4.789012 AAAATGCATCTTGATGTTCCGT 57.211 36.364 0.00 0.00 0.00 4.69
3037 3183 3.770263 AATGCATCTTGATGTTCCGTG 57.230 42.857 0.00 0.00 0.00 4.94
3038 3184 2.183478 TGCATCTTGATGTTCCGTGT 57.817 45.000 11.61 0.00 0.00 4.49
3039 3185 3.326836 TGCATCTTGATGTTCCGTGTA 57.673 42.857 11.61 0.00 0.00 2.90
3040 3186 3.669536 TGCATCTTGATGTTCCGTGTAA 58.330 40.909 11.61 0.00 0.00 2.41
3041 3187 4.260985 TGCATCTTGATGTTCCGTGTAAT 58.739 39.130 11.61 0.00 0.00 1.89
3042 3188 4.094739 TGCATCTTGATGTTCCGTGTAATG 59.905 41.667 11.61 0.00 0.00 1.90
3043 3189 4.591202 CATCTTGATGTTCCGTGTAATGC 58.409 43.478 2.66 0.00 0.00 3.56
3044 3190 3.669536 TCTTGATGTTCCGTGTAATGCA 58.330 40.909 0.00 0.00 0.00 3.96
3045 3191 3.435327 TCTTGATGTTCCGTGTAATGCAC 59.565 43.478 0.00 0.00 44.36 4.57
3088 3236 0.106708 AAAGCTCTGTGGCGACTTCA 59.893 50.000 0.00 0.00 37.29 3.02
3094 3242 1.344438 TCTGTGGCGACTTCATCAACT 59.656 47.619 0.00 0.00 0.00 3.16
3125 3273 3.821995 CCGGCTCGGTATTTTGGG 58.178 61.111 5.56 0.00 42.73 4.12
3132 3280 0.322997 TCGGTATTTTGGGGGTGCTG 60.323 55.000 0.00 0.00 0.00 4.41
3143 3291 1.630878 GGGGGTGCTGATAAGGATAGG 59.369 57.143 0.00 0.00 0.00 2.57
3145 3293 2.339769 GGGTGCTGATAAGGATAGGGT 58.660 52.381 0.00 0.00 0.00 4.34
3158 3306 4.752063 AGGATAGGGTGAGTATATGTGCA 58.248 43.478 0.00 0.00 0.00 4.57
3159 3307 5.345418 AGGATAGGGTGAGTATATGTGCAT 58.655 41.667 0.00 0.00 0.00 3.96
3236 3386 8.994429 ATGTGTTGACTATTGTTGTTTTTCAA 57.006 26.923 0.00 0.00 0.00 2.69
3262 3412 5.046807 GCCTCTTGTTTTACCTCTACCTGTA 60.047 44.000 0.00 0.00 0.00 2.74
3281 3431 6.668283 ACCTGTATAGTGGGCTAATATAGTGG 59.332 42.308 11.92 11.92 0.00 4.00
3282 3432 6.895756 CCTGTATAGTGGGCTAATATAGTGGA 59.104 42.308 9.40 0.00 0.00 4.02
3284 3434 7.476153 TGTATAGTGGGCTAATATAGTGGAGT 58.524 38.462 0.00 0.00 0.00 3.85
3331 3481 2.472059 CGGCAACCACCATCATCGG 61.472 63.158 0.00 0.00 0.00 4.18
3354 3504 1.358787 TCTCCCCCACTCATTTGCATT 59.641 47.619 0.00 0.00 0.00 3.56
3357 3507 2.034124 CCCCCACTCATTTGCATTAGG 58.966 52.381 0.00 0.00 0.00 2.69
3361 3511 4.467769 CCCACTCATTTGCATTAGGATCT 58.532 43.478 0.00 0.00 0.00 2.75
3364 3514 5.238868 CCACTCATTTGCATTAGGATCTCTG 59.761 44.000 0.00 0.00 0.00 3.35
3366 3516 4.139786 TCATTTGCATTAGGATCTCTGCC 58.860 43.478 0.00 0.00 33.70 4.85
3367 3517 3.650281 TTTGCATTAGGATCTCTGCCA 57.350 42.857 0.00 0.00 33.70 4.92
3368 3518 2.627515 TGCATTAGGATCTCTGCCAC 57.372 50.000 0.00 0.00 33.70 5.01
3369 3519 2.121948 TGCATTAGGATCTCTGCCACT 58.878 47.619 0.00 0.00 33.70 4.00
3370 3520 3.308401 TGCATTAGGATCTCTGCCACTA 58.692 45.455 0.00 0.00 33.70 2.74
3371 3521 3.906218 TGCATTAGGATCTCTGCCACTAT 59.094 43.478 0.00 0.00 33.70 2.12
3372 3522 5.086621 TGCATTAGGATCTCTGCCACTATA 58.913 41.667 0.00 0.00 33.70 1.31
3373 3523 5.723405 TGCATTAGGATCTCTGCCACTATAT 59.277 40.000 0.00 0.00 33.70 0.86
3374 3524 6.214208 TGCATTAGGATCTCTGCCACTATATT 59.786 38.462 0.00 0.00 33.70 1.28
3375 3525 7.400052 TGCATTAGGATCTCTGCCACTATATTA 59.600 37.037 0.00 0.00 33.70 0.98
3376 3526 7.925483 GCATTAGGATCTCTGCCACTATATTAG 59.075 40.741 0.00 0.00 0.00 1.73
3377 3527 8.976353 CATTAGGATCTCTGCCACTATATTAGT 58.024 37.037 0.00 0.00 40.28 2.24
3380 3530 6.663093 AGGATCTCTGCCACTATATTAGTCAG 59.337 42.308 0.00 0.00 36.76 3.51
3389 3539 8.880244 TGCCACTATATTAGTCAGGATGTATTT 58.120 33.333 0.00 0.00 36.76 1.40
3417 3567 9.809096 ATGATTCTTACATGTGTATATCGATCC 57.191 33.333 9.11 0.00 0.00 3.36
3418 3568 9.025041 TGATTCTTACATGTGTATATCGATCCT 57.975 33.333 9.11 0.00 0.00 3.24
3466 3619 2.524394 AGTGACCTGACCAGCGGT 60.524 61.111 0.00 0.00 39.44 5.68
3473 3626 0.895530 CCTGACCAGCGGTAGAGAAA 59.104 55.000 0.09 0.00 35.25 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
161 162 0.478072 TGTCAGCTTCCACCAACCAT 59.522 50.000 0.00 0.00 0.00 3.55
231 232 3.134623 TGACTCATCACCAACACACTCTT 59.865 43.478 0.00 0.00 0.00 2.85
345 346 5.044476 TCCTATTGCCCAACTCTTAATTCCA 60.044 40.000 0.00 0.00 0.00 3.53
446 448 3.898123 ACTATGGGTATGAGATTGCGTCT 59.102 43.478 0.00 0.00 40.81 4.18
466 468 5.818678 TCCGCAAAATATATGGGTAGACT 57.181 39.130 0.00 0.00 0.00 3.24
467 469 9.477484 CTATATCCGCAAAATATATGGGTAGAC 57.523 37.037 0.00 0.00 0.00 2.59
468 470 9.429109 TCTATATCCGCAAAATATATGGGTAGA 57.571 33.333 0.00 3.63 0.00 2.59
506 508 9.802039 AAGACTTAACAAGATTTTGTACCCATA 57.198 29.630 1.50 0.00 46.54 2.74
525 527 1.630369 AGTGGGCATGAGCAAGACTTA 59.370 47.619 0.00 0.00 44.61 2.24
535 537 3.576078 ATCCGAAAATAGTGGGCATGA 57.424 42.857 0.00 0.00 0.00 3.07
601 603 2.367486 GCACTTCGAGGAGTACTACCT 58.633 52.381 12.12 12.12 40.80 3.08
602 604 1.404748 GGCACTTCGAGGAGTACTACC 59.595 57.143 0.00 2.33 0.00 3.18
604 606 2.502142 TGGCACTTCGAGGAGTACTA 57.498 50.000 0.00 0.00 0.00 1.82
605 607 1.629043 TTGGCACTTCGAGGAGTACT 58.371 50.000 0.00 0.00 0.00 2.73
606 608 2.450609 TTTGGCACTTCGAGGAGTAC 57.549 50.000 0.00 0.00 0.00 2.73
607 609 3.695830 AATTTGGCACTTCGAGGAGTA 57.304 42.857 0.00 0.00 0.00 2.59
617 619 3.320826 GGGTACAAGTCAAATTTGGCACT 59.679 43.478 23.86 14.90 34.61 4.40
618 620 3.554129 GGGGTACAAGTCAAATTTGGCAC 60.554 47.826 23.86 13.05 34.61 5.01
637 639 1.550842 GGTAGGTAGGGGGTAGGGG 59.449 68.421 0.00 0.00 0.00 4.79
642 644 1.991722 GCAACGGTAGGTAGGGGGT 60.992 63.158 0.00 0.00 0.00 4.95
643 645 2.738938 GGCAACGGTAGGTAGGGGG 61.739 68.421 0.00 0.00 0.00 5.40
644 646 1.269703 AAGGCAACGGTAGGTAGGGG 61.270 60.000 0.00 0.00 46.39 4.79
645 647 1.488390 TAAGGCAACGGTAGGTAGGG 58.512 55.000 0.00 0.00 46.39 3.53
646 648 3.055602 ACTTTAAGGCAACGGTAGGTAGG 60.056 47.826 0.00 0.00 46.39 3.18
647 649 3.930848 CACTTTAAGGCAACGGTAGGTAG 59.069 47.826 0.00 0.00 46.39 3.18
648 650 3.577848 TCACTTTAAGGCAACGGTAGGTA 59.422 43.478 0.00 0.00 46.39 3.08
649 651 2.369532 TCACTTTAAGGCAACGGTAGGT 59.630 45.455 0.00 0.00 46.39 3.08
661 663 7.040755 TGGTGTCATGGTTAACATCACTTTAAG 60.041 37.037 8.10 0.00 37.84 1.85
688 690 4.096003 GAGCCGCTGCCCCTTGTA 62.096 66.667 0.00 0.00 38.69 2.41
693 695 1.453928 AAATTAGAGCCGCTGCCCC 60.454 57.895 0.00 0.00 38.69 5.80
696 698 0.378610 GGACAAATTAGAGCCGCTGC 59.621 55.000 0.00 0.00 37.95 5.25
729 731 4.451900 AGTAGTTGGTTCACTTCACTTGG 58.548 43.478 0.00 0.00 0.00 3.61
752 754 5.817816 ACGACTTATAAAAATGAGCAGAGGG 59.182 40.000 0.00 0.00 0.00 4.30
754 756 7.963981 TGAACGACTTATAAAAATGAGCAGAG 58.036 34.615 0.00 0.00 0.00 3.35
755 757 7.817478 TCTGAACGACTTATAAAAATGAGCAGA 59.183 33.333 0.00 0.00 0.00 4.26
756 758 7.900352 GTCTGAACGACTTATAAAAATGAGCAG 59.100 37.037 0.00 0.00 39.61 4.24
757 759 7.386573 TGTCTGAACGACTTATAAAAATGAGCA 59.613 33.333 0.00 0.00 43.25 4.26
758 760 7.739295 TGTCTGAACGACTTATAAAAATGAGC 58.261 34.615 0.00 0.00 43.25 4.26
759 761 9.530129 GTTGTCTGAACGACTTATAAAAATGAG 57.470 33.333 0.00 0.00 43.25 2.90
760 762 9.268268 AGTTGTCTGAACGACTTATAAAAATGA 57.732 29.630 0.00 0.00 46.14 2.57
761 763 9.318041 CAGTTGTCTGAACGACTTATAAAAATG 57.682 33.333 0.00 0.00 46.14 2.32
762 764 9.268268 TCAGTTGTCTGAACGACTTATAAAAAT 57.732 29.630 0.00 0.00 46.14 1.82
763 765 8.651391 TCAGTTGTCTGAACGACTTATAAAAA 57.349 30.769 0.00 0.00 46.14 1.94
778 780 7.324616 GCAAAGTAGCTTATTTTCAGTTGTCTG 59.675 37.037 0.00 0.00 42.54 3.51
779 781 7.013274 TGCAAAGTAGCTTATTTTCAGTTGTCT 59.987 33.333 0.00 0.00 34.99 3.41
780 782 7.138736 TGCAAAGTAGCTTATTTTCAGTTGTC 58.861 34.615 0.00 0.00 34.99 3.18
781 783 7.038154 TGCAAAGTAGCTTATTTTCAGTTGT 57.962 32.000 0.00 0.00 34.99 3.32
782 784 7.809331 TGATGCAAAGTAGCTTATTTTCAGTTG 59.191 33.333 0.00 0.00 34.99 3.16
783 785 7.885297 TGATGCAAAGTAGCTTATTTTCAGTT 58.115 30.769 0.00 0.00 34.99 3.16
784 786 7.452880 TGATGCAAAGTAGCTTATTTTCAGT 57.547 32.000 0.00 0.00 34.99 3.41
785 787 7.972277 ACATGATGCAAAGTAGCTTATTTTCAG 59.028 33.333 0.00 0.00 34.99 3.02
786 788 7.829725 ACATGATGCAAAGTAGCTTATTTTCA 58.170 30.769 0.00 0.00 34.99 2.69
787 789 8.186821 AGACATGATGCAAAGTAGCTTATTTTC 58.813 33.333 0.00 0.00 34.99 2.29
788 790 8.059798 AGACATGATGCAAAGTAGCTTATTTT 57.940 30.769 0.00 0.00 34.99 1.82
789 791 7.636150 AGACATGATGCAAAGTAGCTTATTT 57.364 32.000 0.00 0.00 34.99 1.40
790 792 8.737168 TTAGACATGATGCAAAGTAGCTTATT 57.263 30.769 0.00 0.00 34.99 1.40
791 793 8.737168 TTTAGACATGATGCAAAGTAGCTTAT 57.263 30.769 0.00 0.00 34.99 1.73
792 794 8.560355 TTTTAGACATGATGCAAAGTAGCTTA 57.440 30.769 0.00 0.00 34.99 3.09
793 795 7.452880 TTTTAGACATGATGCAAAGTAGCTT 57.547 32.000 0.00 0.00 34.99 3.74
794 796 7.478322 CATTTTAGACATGATGCAAAGTAGCT 58.522 34.615 0.00 0.00 34.99 3.32
795 797 6.197842 GCATTTTAGACATGATGCAAAGTAGC 59.802 38.462 0.00 0.00 43.23 3.58
796 798 6.694411 GGCATTTTAGACATGATGCAAAGTAG 59.306 38.462 14.53 0.00 44.99 2.57
797 799 6.377996 AGGCATTTTAGACATGATGCAAAGTA 59.622 34.615 14.53 0.00 44.99 2.24
798 800 5.186409 AGGCATTTTAGACATGATGCAAAGT 59.814 36.000 14.53 0.00 44.99 2.66
799 801 5.657474 AGGCATTTTAGACATGATGCAAAG 58.343 37.500 14.53 0.00 44.99 2.77
800 802 5.664294 AGGCATTTTAGACATGATGCAAA 57.336 34.783 14.53 3.15 44.99 3.68
801 803 5.185442 TGAAGGCATTTTAGACATGATGCAA 59.815 36.000 14.53 0.00 44.99 4.08
802 804 4.705991 TGAAGGCATTTTAGACATGATGCA 59.294 37.500 14.53 0.00 44.99 3.96
803 805 5.252969 TGAAGGCATTTTAGACATGATGC 57.747 39.130 0.00 2.65 43.06 3.91
804 806 6.270815 CCTTGAAGGCATTTTAGACATGATG 58.729 40.000 0.00 0.00 0.00 3.07
805 807 6.461110 CCTTGAAGGCATTTTAGACATGAT 57.539 37.500 0.00 0.00 0.00 2.45
806 808 5.902613 CCTTGAAGGCATTTTAGACATGA 57.097 39.130 0.00 0.00 0.00 3.07
820 822 9.143631 CTGTTCATTTTTATAAAGCCTTGAAGG 57.856 33.333 6.92 6.92 38.80 3.46
821 823 9.912634 TCTGTTCATTTTTATAAAGCCTTGAAG 57.087 29.630 11.34 0.00 0.00 3.02
822 824 9.912634 CTCTGTTCATTTTTATAAAGCCTTGAA 57.087 29.630 0.00 4.59 0.00 2.69
823 825 8.522830 CCTCTGTTCATTTTTATAAAGCCTTGA 58.477 33.333 0.00 0.00 0.00 3.02
824 826 7.761249 CCCTCTGTTCATTTTTATAAAGCCTTG 59.239 37.037 0.00 0.00 0.00 3.61
825 827 7.673926 TCCCTCTGTTCATTTTTATAAAGCCTT 59.326 33.333 0.00 0.00 0.00 4.35
826 828 7.182060 TCCCTCTGTTCATTTTTATAAAGCCT 58.818 34.615 0.00 0.00 0.00 4.58
827 829 7.122799 ACTCCCTCTGTTCATTTTTATAAAGCC 59.877 37.037 0.00 0.00 0.00 4.35
828 830 8.056407 ACTCCCTCTGTTCATTTTTATAAAGC 57.944 34.615 0.00 0.00 0.00 3.51
835 837 8.990163 TTTTAGTACTCCCTCTGTTCATTTTT 57.010 30.769 0.00 0.00 0.00 1.94
836 838 8.990163 TTTTTAGTACTCCCTCTGTTCATTTT 57.010 30.769 0.00 0.00 0.00 1.82
886 888 2.169832 TCGGAGTTTGAGCTTGGAAG 57.830 50.000 0.00 0.00 0.00 3.46
887 889 2.631160 TTCGGAGTTTGAGCTTGGAA 57.369 45.000 0.00 0.00 0.00 3.53
895 897 3.191581 TGTGTTTTGCTTTCGGAGTTTGA 59.808 39.130 0.00 0.00 0.00 2.69
903 905 2.097466 AGAGTGGTGTGTTTTGCTTTCG 59.903 45.455 0.00 0.00 0.00 3.46
926 928 1.022903 AGAGAGGGTTGGGAGGAGAT 58.977 55.000 0.00 0.00 0.00 2.75
945 954 0.459489 GCTTGCTGGTGTTTTGGTGA 59.541 50.000 0.00 0.00 0.00 4.02
961 970 4.436998 CGTCGGGCCGAAGAGCTT 62.437 66.667 33.64 0.00 37.53 3.74
1327 1336 1.453155 GTCAATGACAGGGCGATGTT 58.547 50.000 8.74 0.00 32.25 2.71
1337 1346 1.080093 GCGGTCGAGGTCAATGACA 60.080 57.895 15.86 0.00 33.68 3.58
1578 1587 2.922503 TCAGCGAGCAGGAACCCA 60.923 61.111 0.00 0.00 0.00 4.51
1924 1951 2.579201 CCAGATGAACGGACGCCT 59.421 61.111 0.00 0.00 0.00 5.52
1997 2024 0.173708 GTCGCCGTCATCTTCTCCTT 59.826 55.000 0.00 0.00 0.00 3.36
2003 2030 2.202623 GCTCGTCGCCGTCATCTT 60.203 61.111 0.00 0.00 35.01 2.40
2121 2160 1.738099 GTGCGTGACGAAGCATCCT 60.738 57.895 10.10 0.00 45.69 3.24
2124 2163 2.671177 GCAGTGCGTGACGAAGCAT 61.671 57.895 10.10 0.00 45.69 3.79
2361 2403 1.166531 GCTCACCAACACGCTTCCTT 61.167 55.000 0.00 0.00 0.00 3.36
2402 2444 3.969976 TGAAGAACCATCCATAGCTAGCT 59.030 43.478 23.12 23.12 0.00 3.32
2564 2606 5.540911 ACCATTCAATCACATGTTGGTTTC 58.459 37.500 9.79 0.00 35.71 2.78
2594 2636 7.465960 TCTGATAGGCTAGAGATATCACTGTT 58.534 38.462 12.39 0.00 33.51 3.16
2598 2640 7.938140 ACTTCTGATAGGCTAGAGATATCAC 57.062 40.000 5.32 0.00 33.51 3.06
2601 2643 8.948401 TTGAACTTCTGATAGGCTAGAGATAT 57.052 34.615 0.00 0.00 0.00 1.63
2608 2650 6.351371 CCAAGACTTGAACTTCTGATAGGCTA 60.351 42.308 16.99 0.00 0.00 3.93
2616 2658 4.697514 TCAGTCCAAGACTTGAACTTCTG 58.302 43.478 16.99 14.73 41.37 3.02
2618 2660 5.994668 AGAATCAGTCCAAGACTTGAACTTC 59.005 40.000 16.99 6.70 41.37 3.01
2675 2821 0.111061 TCCACTCAAGGCACATTGCT 59.889 50.000 0.00 0.00 44.28 3.91
2678 2824 1.425066 TCCTTCCACTCAAGGCACATT 59.575 47.619 0.00 0.00 42.63 2.71
2712 2858 8.357402 GCGGATATCCTTTTACAAAATTACCAT 58.643 33.333 19.61 0.00 0.00 3.55
2713 2859 7.339721 TGCGGATATCCTTTTACAAAATTACCA 59.660 33.333 19.61 0.00 0.00 3.25
2714 2860 7.646526 GTGCGGATATCCTTTTACAAAATTACC 59.353 37.037 19.61 0.00 0.00 2.85
2715 2861 7.646526 GGTGCGGATATCCTTTTACAAAATTAC 59.353 37.037 19.61 1.53 0.00 1.89
2716 2862 7.558444 AGGTGCGGATATCCTTTTACAAAATTA 59.442 33.333 19.61 0.00 0.00 1.40
2717 2863 6.379988 AGGTGCGGATATCCTTTTACAAAATT 59.620 34.615 19.61 0.00 0.00 1.82
2718 2864 5.891551 AGGTGCGGATATCCTTTTACAAAAT 59.108 36.000 19.61 0.00 0.00 1.82
2719 2865 5.258051 AGGTGCGGATATCCTTTTACAAAA 58.742 37.500 19.61 0.00 0.00 2.44
2720 2866 4.850680 AGGTGCGGATATCCTTTTACAAA 58.149 39.130 19.61 0.00 0.00 2.83
2721 2867 4.163458 AGAGGTGCGGATATCCTTTTACAA 59.837 41.667 19.61 0.00 0.00 2.41
2722 2868 3.709653 AGAGGTGCGGATATCCTTTTACA 59.290 43.478 19.61 7.11 0.00 2.41
2723 2869 4.039366 AGAGAGGTGCGGATATCCTTTTAC 59.961 45.833 19.61 11.86 0.00 2.01
2724 2870 4.223953 AGAGAGGTGCGGATATCCTTTTA 58.776 43.478 19.61 0.48 0.00 1.52
2725 2871 3.041946 AGAGAGGTGCGGATATCCTTTT 58.958 45.455 19.61 0.89 0.00 2.27
2726 2872 2.683768 AGAGAGGTGCGGATATCCTTT 58.316 47.619 19.61 0.53 0.00 3.11
2727 2873 2.390225 AGAGAGGTGCGGATATCCTT 57.610 50.000 19.61 0.19 0.00 3.36
2728 2874 2.243810 GAAGAGAGGTGCGGATATCCT 58.756 52.381 19.61 0.00 0.00 3.24
2729 2875 1.964223 TGAAGAGAGGTGCGGATATCC 59.036 52.381 12.14 12.14 0.00 2.59
2730 2876 3.951775 ATGAAGAGAGGTGCGGATATC 57.048 47.619 0.00 0.00 0.00 1.63
2731 2877 6.365970 AAATATGAAGAGAGGTGCGGATAT 57.634 37.500 0.00 0.00 0.00 1.63
2732 2878 5.808366 AAATATGAAGAGAGGTGCGGATA 57.192 39.130 0.00 0.00 0.00 2.59
2733 2879 4.696479 AAATATGAAGAGAGGTGCGGAT 57.304 40.909 0.00 0.00 0.00 4.18
2734 2880 4.404394 TGTAAATATGAAGAGAGGTGCGGA 59.596 41.667 0.00 0.00 0.00 5.54
2735 2881 4.693283 TGTAAATATGAAGAGAGGTGCGG 58.307 43.478 0.00 0.00 0.00 5.69
2736 2882 5.592054 TCTGTAAATATGAAGAGAGGTGCG 58.408 41.667 0.00 0.00 0.00 5.34
2737 2883 9.202273 CTTATCTGTAAATATGAAGAGAGGTGC 57.798 37.037 0.00 0.00 0.00 5.01
2738 2884 9.703892 CCTTATCTGTAAATATGAAGAGAGGTG 57.296 37.037 0.00 0.00 0.00 4.00
2739 2885 8.371699 GCCTTATCTGTAAATATGAAGAGAGGT 58.628 37.037 0.00 0.00 32.54 3.85
2740 2886 7.821846 GGCCTTATCTGTAAATATGAAGAGAGG 59.178 40.741 0.00 0.00 32.84 3.69
2741 2887 7.543868 CGGCCTTATCTGTAAATATGAAGAGAG 59.456 40.741 0.00 0.00 0.00 3.20
2742 2888 7.015292 ACGGCCTTATCTGTAAATATGAAGAGA 59.985 37.037 0.00 0.00 0.00 3.10
2743 2889 7.155328 ACGGCCTTATCTGTAAATATGAAGAG 58.845 38.462 0.00 0.00 0.00 2.85
2744 2890 7.015292 AGACGGCCTTATCTGTAAATATGAAGA 59.985 37.037 0.00 0.00 0.00 2.87
2745 2891 7.155328 AGACGGCCTTATCTGTAAATATGAAG 58.845 38.462 0.00 0.00 0.00 3.02
2746 2892 7.062749 AGACGGCCTTATCTGTAAATATGAA 57.937 36.000 0.00 0.00 0.00 2.57
2747 2893 6.665992 AGACGGCCTTATCTGTAAATATGA 57.334 37.500 0.00 0.00 0.00 2.15
2748 2894 7.441157 TGAAAGACGGCCTTATCTGTAAATATG 59.559 37.037 0.00 0.00 34.00 1.78
2749 2895 7.506114 TGAAAGACGGCCTTATCTGTAAATAT 58.494 34.615 0.00 0.00 34.00 1.28
2750 2896 6.880484 TGAAAGACGGCCTTATCTGTAAATA 58.120 36.000 0.00 0.00 34.00 1.40
2751 2897 5.741011 TGAAAGACGGCCTTATCTGTAAAT 58.259 37.500 0.00 0.00 34.00 1.40
2752 2898 5.155278 TGAAAGACGGCCTTATCTGTAAA 57.845 39.130 0.00 0.00 34.00 2.01
2753 2899 4.811969 TGAAAGACGGCCTTATCTGTAA 57.188 40.909 0.00 0.00 34.00 2.41
2754 2900 5.105106 TGAATGAAAGACGGCCTTATCTGTA 60.105 40.000 0.00 0.00 34.00 2.74
2755 2901 3.914426 ATGAAAGACGGCCTTATCTGT 57.086 42.857 0.00 0.00 34.00 3.41
2756 2902 4.191544 TGAATGAAAGACGGCCTTATCTG 58.808 43.478 0.00 0.00 34.00 2.90
2757 2903 4.487714 TGAATGAAAGACGGCCTTATCT 57.512 40.909 0.00 0.00 34.00 1.98
2758 2904 4.214332 GGATGAATGAAAGACGGCCTTATC 59.786 45.833 0.00 0.00 34.00 1.75
2759 2905 4.137543 GGATGAATGAAAGACGGCCTTAT 58.862 43.478 0.00 0.00 34.00 1.73
2760 2906 3.199946 AGGATGAATGAAAGACGGCCTTA 59.800 43.478 0.00 0.00 34.00 2.69
2761 2907 2.025887 AGGATGAATGAAAGACGGCCTT 60.026 45.455 0.00 0.00 36.47 4.35
2762 2908 1.561542 AGGATGAATGAAAGACGGCCT 59.438 47.619 0.00 0.00 0.00 5.19
2763 2909 2.044123 AGGATGAATGAAAGACGGCC 57.956 50.000 0.00 0.00 0.00 6.13
2764 2910 5.757850 AATAAGGATGAATGAAAGACGGC 57.242 39.130 0.00 0.00 0.00 5.68
2765 2911 6.238759 GGGAAATAAGGATGAATGAAAGACGG 60.239 42.308 0.00 0.00 0.00 4.79
2766 2912 6.318648 TGGGAAATAAGGATGAATGAAAGACG 59.681 38.462 0.00 0.00 0.00 4.18
2767 2913 7.122650 TGTGGGAAATAAGGATGAATGAAAGAC 59.877 37.037 0.00 0.00 0.00 3.01
2768 2914 7.181361 TGTGGGAAATAAGGATGAATGAAAGA 58.819 34.615 0.00 0.00 0.00 2.52
2769 2915 7.408756 TGTGGGAAATAAGGATGAATGAAAG 57.591 36.000 0.00 0.00 0.00 2.62
2770 2916 7.310361 GGTTGTGGGAAATAAGGATGAATGAAA 60.310 37.037 0.00 0.00 0.00 2.69
2771 2917 6.154363 GGTTGTGGGAAATAAGGATGAATGAA 59.846 38.462 0.00 0.00 0.00 2.57
2772 2918 5.656416 GGTTGTGGGAAATAAGGATGAATGA 59.344 40.000 0.00 0.00 0.00 2.57
2773 2919 5.658190 AGGTTGTGGGAAATAAGGATGAATG 59.342 40.000 0.00 0.00 0.00 2.67
2774 2920 5.842339 AGGTTGTGGGAAATAAGGATGAAT 58.158 37.500 0.00 0.00 0.00 2.57
2775 2921 5.222233 TGAGGTTGTGGGAAATAAGGATGAA 60.222 40.000 0.00 0.00 0.00 2.57
2776 2922 4.290985 TGAGGTTGTGGGAAATAAGGATGA 59.709 41.667 0.00 0.00 0.00 2.92
2777 2923 4.599041 TGAGGTTGTGGGAAATAAGGATG 58.401 43.478 0.00 0.00 0.00 3.51
2778 2924 4.946160 TGAGGTTGTGGGAAATAAGGAT 57.054 40.909 0.00 0.00 0.00 3.24
2779 2925 4.946160 ATGAGGTTGTGGGAAATAAGGA 57.054 40.909 0.00 0.00 0.00 3.36
2780 2926 5.329035 CAATGAGGTTGTGGGAAATAAGG 57.671 43.478 0.00 0.00 33.01 2.69
2815 2961 4.655649 AGATTGGTCCAAAGGCTTCTTTTT 59.344 37.500 8.75 0.00 38.55 1.94
2816 2962 4.039609 CAGATTGGTCCAAAGGCTTCTTTT 59.960 41.667 8.75 0.00 38.55 2.27
2817 2963 3.575687 CAGATTGGTCCAAAGGCTTCTTT 59.424 43.478 8.75 0.00 41.02 2.52
2818 2964 3.160269 CAGATTGGTCCAAAGGCTTCTT 58.840 45.455 8.75 0.00 0.00 2.52
2819 2965 2.556114 CCAGATTGGTCCAAAGGCTTCT 60.556 50.000 8.75 3.54 31.35 2.85
2820 2966 1.821136 CCAGATTGGTCCAAAGGCTTC 59.179 52.381 8.75 0.96 31.35 3.86
2821 2967 1.928868 CCAGATTGGTCCAAAGGCTT 58.071 50.000 8.75 0.00 31.35 4.35
2822 2968 0.613012 GCCAGATTGGTCCAAAGGCT 60.613 55.000 26.65 15.37 40.46 4.58
2823 2969 0.899717 TGCCAGATTGGTCCAAAGGC 60.900 55.000 26.97 26.97 40.46 4.35
2824 2970 1.479323 CATGCCAGATTGGTCCAAAGG 59.521 52.381 8.75 11.98 40.46 3.11
2825 2971 2.173519 ACATGCCAGATTGGTCCAAAG 58.826 47.619 8.75 1.82 40.46 2.77
2826 2972 2.299582 CAACATGCCAGATTGGTCCAAA 59.700 45.455 8.75 0.00 40.46 3.28
2827 2973 1.894466 CAACATGCCAGATTGGTCCAA 59.106 47.619 6.80 6.80 40.46 3.53
2828 2974 1.548081 CAACATGCCAGATTGGTCCA 58.452 50.000 0.00 0.00 40.46 4.02
2829 2975 0.819582 CCAACATGCCAGATTGGTCC 59.180 55.000 4.28 0.00 40.46 4.46
2830 2976 0.174162 GCCAACATGCCAGATTGGTC 59.826 55.000 12.22 3.40 44.05 4.02
2831 2977 2.279842 GCCAACATGCCAGATTGGT 58.720 52.632 12.22 0.00 44.05 3.67
2852 2998 2.969238 GATGGATGACGCCGGCAG 60.969 66.667 28.98 21.29 0.00 4.85
2853 2999 4.545706 GGATGGATGACGCCGGCA 62.546 66.667 28.98 7.49 0.00 5.69
2855 3001 3.182590 ATGGGATGGATGACGCCGG 62.183 63.158 0.00 0.00 0.00 6.13
2856 3002 1.962822 CATGGGATGGATGACGCCG 60.963 63.158 0.00 0.00 0.00 6.46
2857 3003 2.263741 GCATGGGATGGATGACGCC 61.264 63.158 0.00 0.00 0.00 5.68
2858 3004 2.263741 GGCATGGGATGGATGACGC 61.264 63.158 0.00 0.00 0.00 5.19
2859 3005 0.179009 AAGGCATGGGATGGATGACG 60.179 55.000 0.00 0.00 33.67 4.35
2860 3006 1.613836 GAAGGCATGGGATGGATGAC 58.386 55.000 0.00 0.00 0.00 3.06
2861 3007 0.109153 CGAAGGCATGGGATGGATGA 59.891 55.000 0.00 0.00 0.00 2.92
2862 3008 1.521450 GCGAAGGCATGGGATGGATG 61.521 60.000 0.00 0.00 39.62 3.51
2863 3009 1.228367 GCGAAGGCATGGGATGGAT 60.228 57.895 0.00 0.00 39.62 3.41
2864 3010 2.192979 GCGAAGGCATGGGATGGA 59.807 61.111 0.00 0.00 39.62 3.41
2865 3011 1.895707 GAGCGAAGGCATGGGATGG 60.896 63.158 0.00 0.00 43.41 3.51
2866 3012 1.153107 TGAGCGAAGGCATGGGATG 60.153 57.895 0.00 0.00 43.41 3.51
2867 3013 1.147824 CTGAGCGAAGGCATGGGAT 59.852 57.895 0.00 0.00 43.41 3.85
2868 3014 2.244117 GACTGAGCGAAGGCATGGGA 62.244 60.000 0.00 0.00 43.41 4.37
2869 3015 1.817099 GACTGAGCGAAGGCATGGG 60.817 63.158 0.00 0.00 43.41 4.00
2870 3016 1.817099 GGACTGAGCGAAGGCATGG 60.817 63.158 0.00 0.00 43.41 3.66
2871 3017 2.169789 CGGACTGAGCGAAGGCATG 61.170 63.158 0.00 0.00 43.41 4.06
2872 3018 2.185350 CGGACTGAGCGAAGGCAT 59.815 61.111 0.00 0.00 43.41 4.40
2873 3019 2.989253 TCGGACTGAGCGAAGGCA 60.989 61.111 0.00 0.00 43.41 4.75
2874 3020 2.507324 GTCGGACTGAGCGAAGGC 60.507 66.667 0.00 0.00 40.37 4.35
2875 3021 2.182030 GGTCGGACTGAGCGAAGG 59.818 66.667 8.23 0.00 35.01 3.46
2880 3026 0.741221 GATTGGTGGTCGGACTGAGC 60.741 60.000 8.23 6.53 45.46 4.26
2881 3027 0.608130 TGATTGGTGGTCGGACTGAG 59.392 55.000 8.23 0.00 0.00 3.35
2882 3028 0.320374 GTGATTGGTGGTCGGACTGA 59.680 55.000 8.23 0.00 0.00 3.41
2883 3029 0.673644 GGTGATTGGTGGTCGGACTG 60.674 60.000 8.23 0.00 0.00 3.51
2884 3030 1.125093 TGGTGATTGGTGGTCGGACT 61.125 55.000 8.23 0.00 0.00 3.85
2885 3031 0.953960 GTGGTGATTGGTGGTCGGAC 60.954 60.000 0.00 0.00 0.00 4.79
2886 3032 1.373435 GTGGTGATTGGTGGTCGGA 59.627 57.895 0.00 0.00 0.00 4.55
2887 3033 1.674322 GGTGGTGATTGGTGGTCGG 60.674 63.158 0.00 0.00 0.00 4.79
2888 3034 1.072332 TGGTGGTGATTGGTGGTCG 59.928 57.895 0.00 0.00 0.00 4.79
2889 3035 1.234615 CGTGGTGGTGATTGGTGGTC 61.235 60.000 0.00 0.00 0.00 4.02
2890 3036 1.228124 CGTGGTGGTGATTGGTGGT 60.228 57.895 0.00 0.00 0.00 4.16
2891 3037 2.625823 GCGTGGTGGTGATTGGTGG 61.626 63.158 0.00 0.00 0.00 4.61
2892 3038 2.625823 GGCGTGGTGGTGATTGGTG 61.626 63.158 0.00 0.00 0.00 4.17
2893 3039 2.282180 GGCGTGGTGGTGATTGGT 60.282 61.111 0.00 0.00 0.00 3.67
2894 3040 3.061848 GGGCGTGGTGGTGATTGG 61.062 66.667 0.00 0.00 0.00 3.16
2895 3041 3.061848 GGGGCGTGGTGGTGATTG 61.062 66.667 0.00 0.00 0.00 2.67
2896 3042 3.575247 TGGGGCGTGGTGGTGATT 61.575 61.111 0.00 0.00 0.00 2.57
2897 3043 4.344865 GTGGGGCGTGGTGGTGAT 62.345 66.667 0.00 0.00 0.00 3.06
2899 3045 4.579384 AAGTGGGGCGTGGTGGTG 62.579 66.667 0.00 0.00 0.00 4.17
2900 3046 4.265056 GAAGTGGGGCGTGGTGGT 62.265 66.667 0.00 0.00 0.00 4.16
2901 3047 3.901797 GAGAAGTGGGGCGTGGTGG 62.902 68.421 0.00 0.00 0.00 4.61
2902 3048 2.358737 GAGAAGTGGGGCGTGGTG 60.359 66.667 0.00 0.00 0.00 4.17
2903 3049 3.637273 GGAGAAGTGGGGCGTGGT 61.637 66.667 0.00 0.00 0.00 4.16
2904 3050 3.316573 GAGGAGAAGTGGGGCGTGG 62.317 68.421 0.00 0.00 0.00 4.94
2905 3051 2.266055 GAGGAGAAGTGGGGCGTG 59.734 66.667 0.00 0.00 0.00 5.34
2906 3052 2.203788 TGAGGAGAAGTGGGGCGT 60.204 61.111 0.00 0.00 0.00 5.68
2907 3053 2.266055 GTGAGGAGAAGTGGGGCG 59.734 66.667 0.00 0.00 0.00 6.13
2908 3054 1.492993 AAGGTGAGGAGAAGTGGGGC 61.493 60.000 0.00 0.00 0.00 5.80
2909 3055 1.952621 TAAGGTGAGGAGAAGTGGGG 58.047 55.000 0.00 0.00 0.00 4.96
2910 3056 3.107601 TGATAAGGTGAGGAGAAGTGGG 58.892 50.000 0.00 0.00 0.00 4.61
2911 3057 3.772025 AGTGATAAGGTGAGGAGAAGTGG 59.228 47.826 0.00 0.00 0.00 4.00
2912 3058 4.142049 GGAGTGATAAGGTGAGGAGAAGTG 60.142 50.000 0.00 0.00 0.00 3.16
2913 3059 4.027437 GGAGTGATAAGGTGAGGAGAAGT 58.973 47.826 0.00 0.00 0.00 3.01
2914 3060 4.285863 AGGAGTGATAAGGTGAGGAGAAG 58.714 47.826 0.00 0.00 0.00 2.85
2915 3061 4.017037 AGAGGAGTGATAAGGTGAGGAGAA 60.017 45.833 0.00 0.00 0.00 2.87
2916 3062 3.529734 AGAGGAGTGATAAGGTGAGGAGA 59.470 47.826 0.00 0.00 0.00 3.71
2917 3063 3.909732 AGAGGAGTGATAAGGTGAGGAG 58.090 50.000 0.00 0.00 0.00 3.69
2918 3064 4.338795 AAGAGGAGTGATAAGGTGAGGA 57.661 45.455 0.00 0.00 0.00 3.71
2919 3065 4.714308 AGAAAGAGGAGTGATAAGGTGAGG 59.286 45.833 0.00 0.00 0.00 3.86
2920 3066 5.656416 AGAGAAAGAGGAGTGATAAGGTGAG 59.344 44.000 0.00 0.00 0.00 3.51
2921 3067 5.584913 AGAGAAAGAGGAGTGATAAGGTGA 58.415 41.667 0.00 0.00 0.00 4.02
2922 3068 5.930837 AGAGAAAGAGGAGTGATAAGGTG 57.069 43.478 0.00 0.00 0.00 4.00
2923 3069 6.975949 TCTAGAGAAAGAGGAGTGATAAGGT 58.024 40.000 0.00 0.00 0.00 3.50
2924 3070 9.753674 ATATCTAGAGAAAGAGGAGTGATAAGG 57.246 37.037 0.00 0.00 0.00 2.69
2928 3074 9.827198 AATGATATCTAGAGAAAGAGGAGTGAT 57.173 33.333 3.98 0.00 0.00 3.06
2968 3114 2.622064 ACTCATGCGGGAGTAATTCC 57.378 50.000 8.19 0.00 45.95 3.01
2975 3121 1.137675 TCTGATTGACTCATGCGGGAG 59.862 52.381 3.13 3.13 40.79 4.30
2976 3122 1.194218 TCTGATTGACTCATGCGGGA 58.806 50.000 0.00 0.00 32.10 5.14
2977 3123 1.667724 GTTCTGATTGACTCATGCGGG 59.332 52.381 0.00 0.00 32.10 6.13
2978 3124 2.349590 TGTTCTGATTGACTCATGCGG 58.650 47.619 0.00 0.00 32.10 5.69
2979 3125 2.350804 CCTGTTCTGATTGACTCATGCG 59.649 50.000 0.00 0.00 32.10 4.73
2980 3126 3.126514 CACCTGTTCTGATTGACTCATGC 59.873 47.826 0.00 0.00 32.10 4.06
2981 3127 4.321718 ACACCTGTTCTGATTGACTCATG 58.678 43.478 0.00 0.00 32.10 3.07
2982 3128 4.630644 ACACCTGTTCTGATTGACTCAT 57.369 40.909 0.00 0.00 32.10 2.90
2983 3129 4.422073 AACACCTGTTCTGATTGACTCA 57.578 40.909 0.00 0.00 31.64 3.41
2984 3130 5.066505 ACAAAACACCTGTTCTGATTGACTC 59.933 40.000 0.00 0.00 37.25 3.36
2985 3131 4.949856 ACAAAACACCTGTTCTGATTGACT 59.050 37.500 0.00 0.00 37.25 3.41
2986 3132 5.036737 CACAAAACACCTGTTCTGATTGAC 58.963 41.667 0.00 0.00 37.25 3.18
2987 3133 4.946772 TCACAAAACACCTGTTCTGATTGA 59.053 37.500 0.00 0.00 37.25 2.57
2988 3134 5.247507 TCACAAAACACCTGTTCTGATTG 57.752 39.130 0.00 0.00 37.25 2.67
2989 3135 5.913137 TTCACAAAACACCTGTTCTGATT 57.087 34.783 0.00 0.00 37.25 2.57
2990 3136 5.913137 TTTCACAAAACACCTGTTCTGAT 57.087 34.783 0.00 0.00 37.25 2.90
2991 3137 5.713792 TTTTCACAAAACACCTGTTCTGA 57.286 34.783 0.00 0.00 37.25 3.27
3014 3160 4.925054 CACGGAACATCAAGATGCATTTTT 59.075 37.500 9.85 0.00 42.39 1.94
3015 3161 4.022068 ACACGGAACATCAAGATGCATTTT 60.022 37.500 9.85 0.00 42.39 1.82
3016 3162 3.507233 ACACGGAACATCAAGATGCATTT 59.493 39.130 9.85 0.00 42.39 2.32
3017 3163 3.084039 ACACGGAACATCAAGATGCATT 58.916 40.909 9.85 0.00 42.39 3.56
3018 3164 2.715046 ACACGGAACATCAAGATGCAT 58.285 42.857 9.85 0.00 42.39 3.96
3019 3165 2.183478 ACACGGAACATCAAGATGCA 57.817 45.000 9.85 0.00 42.39 3.96
3020 3166 4.591202 CATTACACGGAACATCAAGATGC 58.409 43.478 9.85 0.00 42.39 3.91
3021 3167 4.094739 TGCATTACACGGAACATCAAGATG 59.905 41.667 8.45 8.45 44.15 2.90
3022 3168 4.094887 GTGCATTACACGGAACATCAAGAT 59.905 41.667 0.00 0.00 40.07 2.40
3023 3169 3.435327 GTGCATTACACGGAACATCAAGA 59.565 43.478 0.00 0.00 40.07 3.02
3024 3170 3.747193 GTGCATTACACGGAACATCAAG 58.253 45.455 0.00 0.00 40.07 3.02
3025 3171 3.822594 GTGCATTACACGGAACATCAA 57.177 42.857 0.00 0.00 40.07 2.57
3042 3188 1.432270 GACTAGCAAGATGCCCGTGC 61.432 60.000 6.11 6.11 46.52 5.34
3043 3189 1.148157 CGACTAGCAAGATGCCCGTG 61.148 60.000 0.00 0.00 46.52 4.94
3044 3190 1.141881 CGACTAGCAAGATGCCCGT 59.858 57.895 0.00 0.00 46.52 5.28
3045 3191 0.872021 GTCGACTAGCAAGATGCCCG 60.872 60.000 8.70 0.00 46.52 6.13
3046 3192 0.461961 AGTCGACTAGCAAGATGCCC 59.538 55.000 18.46 0.00 46.52 5.36
3047 3193 2.099263 TGTAGTCGACTAGCAAGATGCC 59.901 50.000 25.28 10.81 46.52 4.40
3048 3194 3.422417 TGTAGTCGACTAGCAAGATGC 57.578 47.619 25.28 11.50 45.46 3.91
3049 3195 5.220303 GCTTTTGTAGTCGACTAGCAAGATG 60.220 44.000 27.32 22.28 31.85 2.90
3050 3196 4.865365 GCTTTTGTAGTCGACTAGCAAGAT 59.135 41.667 27.32 8.24 31.85 2.40
3051 3197 4.022242 AGCTTTTGTAGTCGACTAGCAAGA 60.022 41.667 29.39 24.05 33.10 3.02
3052 3198 4.238514 AGCTTTTGTAGTCGACTAGCAAG 58.761 43.478 29.39 25.80 33.10 4.01
3053 3199 4.022242 AGAGCTTTTGTAGTCGACTAGCAA 60.022 41.667 29.39 26.65 33.10 3.91
3054 3200 3.506455 AGAGCTTTTGTAGTCGACTAGCA 59.494 43.478 29.39 23.67 33.10 3.49
3055 3201 3.854809 CAGAGCTTTTGTAGTCGACTAGC 59.145 47.826 25.28 24.33 0.00 3.42
3056 3202 4.854291 CACAGAGCTTTTGTAGTCGACTAG 59.146 45.833 25.28 15.97 0.00 2.57
3057 3203 4.321008 CCACAGAGCTTTTGTAGTCGACTA 60.321 45.833 21.25 21.25 0.00 2.59
3058 3204 3.553096 CCACAGAGCTTTTGTAGTCGACT 60.553 47.826 23.66 23.66 0.00 4.18
3088 3236 4.336433 CCGGCACATCATCTTAAAGTTGAT 59.664 41.667 0.00 0.00 35.62 2.57
3094 3242 2.288666 GAGCCGGCACATCATCTTAAA 58.711 47.619 31.54 0.00 0.00 1.52
3118 3266 2.314549 TCCTTATCAGCACCCCCAAAAT 59.685 45.455 0.00 0.00 0.00 1.82
3125 3273 2.039084 CACCCTATCCTTATCAGCACCC 59.961 54.545 0.00 0.00 0.00 4.61
3132 3280 7.124298 TGCACATATACTCACCCTATCCTTATC 59.876 40.741 0.00 0.00 0.00 1.75
3143 3291 4.201910 ACGCAAAATGCACATATACTCACC 60.202 41.667 2.99 0.00 45.36 4.02
3145 3293 4.260172 CGACGCAAAATGCACATATACTCA 60.260 41.667 2.99 0.00 45.36 3.41
3158 3306 1.873698 ACACAGTACCGACGCAAAAT 58.126 45.000 0.00 0.00 0.00 1.82
3159 3307 1.654317 AACACAGTACCGACGCAAAA 58.346 45.000 0.00 0.00 0.00 2.44
3236 3386 4.597940 AGGTAGAGGTAAAACAAGAGGCTT 59.402 41.667 0.00 0.00 0.00 4.35
3262 3412 7.873699 AAACTCCACTATATTAGCCCACTAT 57.126 36.000 0.00 0.00 0.00 2.12
3281 3431 7.551617 TCCTCTATAATTTCGACCCAAAAACTC 59.448 37.037 0.00 0.00 0.00 3.01
3282 3432 7.399634 TCCTCTATAATTTCGACCCAAAAACT 58.600 34.615 0.00 0.00 0.00 2.66
3284 3434 6.317893 GCTCCTCTATAATTTCGACCCAAAAA 59.682 38.462 0.00 0.00 0.00 1.94
3324 3474 1.059913 GTGGGGGAGATTCCGATGAT 58.940 55.000 0.00 0.00 37.43 2.45
3331 3481 2.027385 GCAAATGAGTGGGGGAGATTC 58.973 52.381 0.00 0.00 0.00 2.52
3354 3504 7.699878 TGACTAATATAGTGGCAGAGATCCTA 58.300 38.462 0.00 0.00 39.59 2.94
3357 3507 6.661377 TCCTGACTAATATAGTGGCAGAGATC 59.339 42.308 6.94 0.00 39.59 2.75
3361 3511 6.077993 ACATCCTGACTAATATAGTGGCAGA 58.922 40.000 6.94 0.00 39.59 4.26
3364 3514 9.372369 GAAATACATCCTGACTAATATAGTGGC 57.628 37.037 0.00 0.00 39.59 5.01
3375 3525 9.553064 GTAAGAATCATGAAATACATCCTGACT 57.447 33.333 0.00 0.00 37.07 3.41
3376 3526 9.330063 TGTAAGAATCATGAAATACATCCTGAC 57.670 33.333 0.00 0.00 37.07 3.51
3380 3530 9.888878 CACATGTAAGAATCATGAAATACATCC 57.111 33.333 16.63 0.00 43.47 3.51
3393 3543 9.862371 AAGGATCGATATACACATGTAAGAATC 57.138 33.333 0.00 0.00 33.76 2.52
3431 3581 8.360390 CAGGTCACTGTAGCTATTGATTATACA 58.640 37.037 0.00 0.00 39.92 2.29
3438 3588 3.447586 GGTCAGGTCACTGTAGCTATTGA 59.552 47.826 0.00 0.00 45.14 2.57
3439 3589 3.195610 TGGTCAGGTCACTGTAGCTATTG 59.804 47.826 0.00 0.00 45.14 1.90
3440 3590 3.441101 TGGTCAGGTCACTGTAGCTATT 58.559 45.455 0.00 0.00 45.14 1.73
3442 3592 2.447443 CTGGTCAGGTCACTGTAGCTA 58.553 52.381 0.00 0.00 45.14 3.32
3444 3594 0.390472 GCTGGTCAGGTCACTGTAGC 60.390 60.000 0.00 0.00 45.14 3.58
3445 3595 0.109086 CGCTGGTCAGGTCACTGTAG 60.109 60.000 0.00 0.00 45.14 2.74
3446 3596 1.532604 CCGCTGGTCAGGTCACTGTA 61.533 60.000 0.00 0.00 45.14 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.