Multiple sequence alignment - TraesCS6A01G050400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G050400 chr6A 100.000 5015 0 0 1 5015 25705985 25700971 0.000000e+00 9262.0
1 TraesCS6A01G050400 chr6A 87.363 641 74 2 3100 3740 25767764 25767131 0.000000e+00 728.0
2 TraesCS6A01G050400 chr6A 86.282 554 61 8 1009 1550 25771434 25770884 5.590000e-164 588.0
3 TraesCS6A01G050400 chr6A 76.849 933 143 36 1867 2741 25769020 25768103 4.580000e-125 459.0
4 TraesCS6A01G050400 chr6B 94.641 2090 89 16 1717 3793 44293190 44291111 0.000000e+00 3217.0
5 TraesCS6A01G050400 chr6B 93.073 563 24 6 1169 1716 44293787 44293225 0.000000e+00 809.0
6 TraesCS6A01G050400 chr6B 86.991 638 78 2 3099 3732 44825918 44825282 0.000000e+00 713.0
7 TraesCS6A01G050400 chr6B 86.441 531 53 14 1009 1525 44828189 44827664 9.430000e-157 564.0
8 TraesCS6A01G050400 chr6B 76.389 936 137 57 1870 2746 44827189 44826279 1.290000e-115 427.0
9 TraesCS6A01G050400 chr6B 95.098 204 6 4 874 1074 44294219 44294017 8.100000e-83 318.0
10 TraesCS6A01G050400 chr6B 88.312 77 2 2 4149 4218 44290569 44290493 8.950000e-13 86.1
11 TraesCS6A01G050400 chr6B 92.157 51 4 0 3926 3976 44825087 44825037 6.960000e-09 73.1
12 TraesCS6A01G050400 chrUn 93.953 1141 52 9 1717 2842 94864343 94863205 0.000000e+00 1709.0
13 TraesCS6A01G050400 chrUn 95.758 943 32 6 2852 3793 94863117 94862182 0.000000e+00 1513.0
14 TraesCS6A01G050400 chrUn 96.349 849 20 4 874 1716 94865225 94864382 0.000000e+00 1386.0
15 TraesCS6A01G050400 chrUn 78.404 1968 253 78 1867 3740 94876634 94874745 0.000000e+00 1122.0
16 TraesCS6A01G050400 chrUn 87.961 515 54 7 185 697 325907217 325907725 7.180000e-168 601.0
17 TraesCS6A01G050400 chrUn 86.299 562 59 12 1008 1554 94878191 94877633 3.340000e-166 595.0
18 TraesCS6A01G050400 chrUn 87.573 515 57 6 185 697 214904918 214905427 1.560000e-164 590.0
19 TraesCS6A01G050400 chrUn 87.549 514 58 5 185 697 325910298 325910806 1.560000e-164 590.0
20 TraesCS6A01G050400 chrUn 87.921 505 54 6 185 687 459632271 459631772 5.590000e-164 588.0
21 TraesCS6A01G050400 chrUn 88.641 449 47 4 185 632 342113497 342113942 1.230000e-150 544.0
22 TraesCS6A01G050400 chrUn 94.118 204 10 1 3793 3994 94862078 94861875 4.880000e-80 309.0
23 TraesCS6A01G050400 chrUn 82.895 228 17 8 3999 4218 94860224 94860011 8.570000e-43 185.0
24 TraesCS6A01G050400 chrUn 85.000 180 24 1 4735 4914 95767626 95767450 3.990000e-41 180.0
25 TraesCS6A01G050400 chrUn 93.162 117 6 2 1 117 94866213 94866099 2.400000e-38 171.0
26 TraesCS6A01G050400 chrUn 94.048 84 4 1 4672 4754 94859615 94859532 5.270000e-25 126.0
27 TraesCS6A01G050400 chrUn 88.462 78 9 0 4913 4990 37077383 37077460 1.490000e-15 95.3
28 TraesCS6A01G050400 chrUn 92.593 54 4 0 694 747 214805999 214806052 1.500000e-10 78.7
29 TraesCS6A01G050400 chrUn 85.000 60 7 2 4930 4988 190888216 190888274 5.420000e-05 60.2
30 TraesCS6A01G050400 chr2A 90.118 678 57 7 185 857 58354813 58355485 0.000000e+00 872.0
31 TraesCS6A01G050400 chr4B 87.892 702 68 12 185 875 673331658 673332353 0.000000e+00 809.0
32 TraesCS6A01G050400 chr1B 88.909 559 50 7 185 738 36711981 36712532 0.000000e+00 678.0
33 TraesCS6A01G050400 chr1B 87.654 162 20 0 4753 4914 436689151 436688990 6.630000e-44 189.0
34 TraesCS6A01G050400 chr1B 88.158 76 9 0 4913 4988 487415741 487415816 1.920000e-14 91.6
35 TraesCS6A01G050400 chr2D 85.714 546 59 14 185 720 628806340 628806876 4.390000e-155 558.0
36 TraesCS6A01G050400 chr2D 85.794 359 42 7 4273 4624 651426267 651425911 6.130000e-99 372.0
37 TraesCS6A01G050400 chr2D 86.513 304 34 7 4328 4627 479061718 479062018 1.350000e-85 327.0
38 TraesCS6A01G050400 chr2B 86.139 303 33 7 4332 4630 870616 870913 8.100000e-83 318.0
39 TraesCS6A01G050400 chr5A 82.451 359 55 7 4279 4631 570173298 570172942 1.750000e-79 307.0
40 TraesCS6A01G050400 chr5A 87.654 162 20 0 4753 4914 605231304 605231143 6.630000e-44 189.0
41 TraesCS6A01G050400 chr3B 82.336 351 55 6 4273 4618 60693355 60693007 1.060000e-76 298.0
42 TraesCS6A01G050400 chr3B 88.312 77 9 0 4913 4989 738378171 738378095 5.350000e-15 93.5
43 TraesCS6A01G050400 chr6D 81.720 372 49 17 4267 4630 378256884 378257244 4.910000e-75 292.0
44 TraesCS6A01G050400 chr6D 86.127 173 21 3 4742 4914 431160659 431160828 3.080000e-42 183.0
45 TraesCS6A01G050400 chr6D 85.632 174 24 1 4749 4921 145462629 145462456 1.110000e-41 182.0
46 TraesCS6A01G050400 chr6D 82.895 76 13 0 4913 4988 401298625 401298550 9.010000e-08 69.4
47 TraesCS6A01G050400 chr3A 80.822 365 62 7 4267 4625 1917953 1918315 3.820000e-71 279.0
48 TraesCS6A01G050400 chr5B 80.481 374 61 9 4267 4632 34896335 34896704 4.950000e-70 276.0
49 TraesCS6A01G050400 chr4A 80.707 368 58 10 4273 4633 562300932 562300571 1.780000e-69 274.0
50 TraesCS6A01G050400 chr3D 82.510 263 34 7 2222 2478 421608732 421608476 2.350000e-53 220.0
51 TraesCS6A01G050400 chr4D 87.425 167 18 2 4751 4914 25379684 25379850 6.630000e-44 189.0
52 TraesCS6A01G050400 chr4D 86.310 168 23 0 4753 4920 36603208 36603041 3.080000e-42 183.0
53 TraesCS6A01G050400 chr7D 86.667 165 22 0 4750 4914 397554913 397555077 3.080000e-42 183.0
54 TraesCS6A01G050400 chr7D 92.105 76 6 0 4913 4988 575716139 575716064 1.910000e-19 108.0
55 TraesCS6A01G050400 chr7D 82.090 67 12 0 4922 4988 1306286 1306220 1.950000e-04 58.4
56 TraesCS6A01G050400 chr1D 84.358 179 28 0 4736 4914 314014244 314014422 5.160000e-40 176.0
57 TraesCS6A01G050400 chr7B 91.549 71 2 4 4932 5001 658042544 658042477 1.490000e-15 95.3
58 TraesCS6A01G050400 chr7B 85.526 76 11 0 4913 4988 33414298 33414223 4.160000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G050400 chr6A 25700971 25705985 5014 True 9262.000000 9262 100.000000 1 5015 1 chr6A.!!$R1 5014
1 TraesCS6A01G050400 chr6A 25767131 25771434 4303 True 591.666667 728 83.498000 1009 3740 3 chr6A.!!$R2 2731
2 TraesCS6A01G050400 chr6B 44290493 44294219 3726 True 1107.525000 3217 92.781000 874 4218 4 chr6B.!!$R1 3344
3 TraesCS6A01G050400 chr6B 44825037 44828189 3152 True 444.275000 713 85.494500 1009 3976 4 chr6B.!!$R2 2967
4 TraesCS6A01G050400 chrUn 94874745 94878191 3446 True 858.500000 1122 82.351500 1008 3740 2 chrUn.!!$R4 2732
5 TraesCS6A01G050400 chrUn 94859532 94866213 6681 True 771.285714 1709 92.897571 1 4754 7 chrUn.!!$R3 4753
6 TraesCS6A01G050400 chrUn 325907217 325910806 3589 False 595.500000 601 87.755000 185 697 2 chrUn.!!$F6 512
7 TraesCS6A01G050400 chrUn 214904918 214905427 509 False 590.000000 590 87.573000 185 697 1 chrUn.!!$F4 512
8 TraesCS6A01G050400 chr2A 58354813 58355485 672 False 872.000000 872 90.118000 185 857 1 chr2A.!!$F1 672
9 TraesCS6A01G050400 chr4B 673331658 673332353 695 False 809.000000 809 87.892000 185 875 1 chr4B.!!$F1 690
10 TraesCS6A01G050400 chr1B 36711981 36712532 551 False 678.000000 678 88.909000 185 738 1 chr1B.!!$F1 553
11 TraesCS6A01G050400 chr2D 628806340 628806876 536 False 558.000000 558 85.714000 185 720 1 chr2D.!!$F2 535

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
123 124 0.389948 GCTCCGACCACGTCAGAAAT 60.390 55.000 0.0 0.0 37.88 2.17 F
124 125 1.939838 GCTCCGACCACGTCAGAAATT 60.940 52.381 0.0 0.0 37.88 1.82 F
1197 1940 0.041238 CACCCCTCTACTCCCAGTCA 59.959 60.000 0.0 0.0 0.00 3.41 F
1999 4358 1.634702 GCGGTAGTTCTGCTCTCTTG 58.365 55.000 0.0 0.0 44.39 3.02 F
3692 6257 0.606401 CGTGGGTCAACATCTTGGCT 60.606 55.000 0.0 0.0 32.11 4.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1179 1922 1.019650 ATGACTGGGAGTAGAGGGGT 58.980 55.000 0.00 0.0 0.00 4.95 R
1914 4272 1.734465 GAAGCCAACCACAGATCTTCG 59.266 52.381 0.00 0.0 0.00 3.79 R
2180 4566 2.036346 ACTTCTGCAACTGGAAAATGCC 59.964 45.455 0.00 0.0 39.31 4.40 R
3722 6287 0.598158 GTACACGGCGTCAACCTTCA 60.598 55.000 10.85 0.0 0.00 3.02 R
4529 10425 0.250467 AAAGGTGCACGCAGACATCT 60.250 50.000 11.45 0.0 30.71 2.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 7.234355 ACAACCATCTCTAGGAAAAAGTGAAT 58.766 34.615 0.00 0.00 0.00 2.57
27 28 9.231297 CAACCATCTCTAGGAAAAAGTGAATAA 57.769 33.333 0.00 0.00 0.00 1.40
32 33 7.166167 TCTCTAGGAAAAAGTGAATAACCACC 58.834 38.462 0.00 0.00 37.76 4.61
45 46 5.705441 TGAATAACCACCAACATGAGAGTTC 59.295 40.000 0.00 0.00 0.00 3.01
96 97 4.798682 TCTCGCTCCCCCTTCCCC 62.799 72.222 0.00 0.00 0.00 4.81
120 121 3.733960 CGCTCCGACCACGTCAGA 61.734 66.667 0.00 0.00 37.88 3.27
121 122 2.649034 GCTCCGACCACGTCAGAA 59.351 61.111 0.00 0.00 37.88 3.02
122 123 1.006571 GCTCCGACCACGTCAGAAA 60.007 57.895 0.00 0.00 37.88 2.52
123 124 0.389948 GCTCCGACCACGTCAGAAAT 60.390 55.000 0.00 0.00 37.88 2.17
124 125 1.939838 GCTCCGACCACGTCAGAAATT 60.940 52.381 0.00 0.00 37.88 1.82
125 126 1.993370 CTCCGACCACGTCAGAAATTC 59.007 52.381 0.00 0.00 37.88 2.17
145 708 2.746904 TCGGTTCGATGCAAAATGTCAT 59.253 40.909 0.00 0.00 0.00 3.06
156 719 8.809478 CGATGCAAAATGTCATGAATCATAAAA 58.191 29.630 0.00 0.00 32.05 1.52
159 722 8.884726 TGCAAAATGTCATGAATCATAAAATGG 58.115 29.630 0.00 0.00 0.00 3.16
352 922 3.842923 CTCTCGCCCGGCAGTCAT 61.843 66.667 10.77 0.00 0.00 3.06
356 926 4.457496 CGCCCGGCAGTCATCAGT 62.457 66.667 10.77 0.00 0.00 3.41
414 984 2.044793 AGGGTTCATGTCCTCCTCAA 57.955 50.000 8.91 0.00 0.00 3.02
483 1053 8.418597 TTCTTGACTGTCTACTACAATAAGGT 57.581 34.615 9.51 0.00 37.74 3.50
492 1062 6.657966 GTCTACTACAATAAGGTTTTTGCCCT 59.342 38.462 0.00 0.00 0.00 5.19
505 1075 2.359850 GCCCTGTTGCGGTGATGA 60.360 61.111 0.00 0.00 0.00 2.92
518 1088 3.256879 GCGGTGATGAAGGAGAGATGATA 59.743 47.826 0.00 0.00 0.00 2.15
575 1145 4.021894 GTCGTTGCTAGGTGATCTATGGAT 60.022 45.833 0.00 0.00 34.45 3.41
684 1272 5.536538 AGAAGGATATATGAACGCTCTGTGA 59.463 40.000 0.00 0.00 0.00 3.58
741 1332 3.073798 ACCTGAGAGAGTGAGTGAGAGAA 59.926 47.826 0.00 0.00 0.00 2.87
790 1391 9.530633 GTTGTGACCGAGATATAAGATTTAAGT 57.469 33.333 0.00 0.00 0.00 2.24
795 1396 8.912787 ACCGAGATATAAGATTTAAGTATGCG 57.087 34.615 0.00 0.00 0.00 4.73
837 1438 9.513906 TGAACTTTTAGATGGACACATATTGAA 57.486 29.630 0.00 0.00 37.47 2.69
922 1526 5.049828 CAGCGGGAAAAAGAACAGAAAAAT 58.950 37.500 0.00 0.00 0.00 1.82
926 1530 7.766738 AGCGGGAAAAAGAACAGAAAAATAAAA 59.233 29.630 0.00 0.00 0.00 1.52
927 1531 8.556194 GCGGGAAAAAGAACAGAAAAATAAAAT 58.444 29.630 0.00 0.00 0.00 1.82
1197 1940 0.041238 CACCCCTCTACTCCCAGTCA 59.959 60.000 0.00 0.00 0.00 3.41
1729 3654 7.260603 AGATAGATACAATTTGCTTGGTTTGC 58.739 34.615 0.00 0.00 39.30 3.68
1879 4235 6.038714 GTGATGCATTTCTTTTACCCTCTAGG 59.961 42.308 0.00 0.00 43.78 3.02
1914 4272 7.649057 AGTTGCACTTCTAGTTATTTGGTTTC 58.351 34.615 0.00 0.00 0.00 2.78
1999 4358 1.634702 GCGGTAGTTCTGCTCTCTTG 58.365 55.000 0.00 0.00 44.39 3.02
2061 4420 3.873361 TGCTACATGCTTAATCTCTGCAC 59.127 43.478 0.00 0.00 43.37 4.57
2180 4566 5.303971 ACTCTCAGATCCACACAAGAAAAG 58.696 41.667 0.00 0.00 0.00 2.27
2347 4747 9.379791 GTTAGCATTTTATCCTACTGTTACTGT 57.620 33.333 0.00 0.00 0.00 3.55
2533 4934 4.444056 GCATTTGTGCTTTTGTACACGAAT 59.556 37.500 0.00 3.35 46.86 3.34
2546 4947 3.402628 ACACGAATGGGACTATATGGC 57.597 47.619 0.00 0.00 0.00 4.40
2751 5175 7.737869 TGGACACTGGTAAGTATTTACTTGAA 58.262 34.615 12.20 0.00 45.44 2.69
2752 5176 8.212312 TGGACACTGGTAAGTATTTACTTGAAA 58.788 33.333 12.20 0.00 45.44 2.69
2805 5276 7.067737 AGGGTGAAACTTTAATTTCGTTCAAGA 59.932 33.333 0.00 0.00 40.79 3.02
2902 5451 2.107552 TGGAACTACTTGGAAACTGGGG 59.892 50.000 0.00 0.00 0.00 4.96
3088 5648 6.873605 TGTAGTTTGGTTATGAGTCATGACTG 59.126 38.462 32.50 0.00 42.66 3.51
3132 5694 4.707934 GGTCCGGATAAATTCCCAAAAGAA 59.292 41.667 7.81 0.00 42.06 2.52
3403 5965 7.596494 TCATGATCTGACATTTTCCTCAAAAC 58.404 34.615 0.00 0.00 34.24 2.43
3557 6122 2.031516 CCAGCTGCTCAACCTGACG 61.032 63.158 8.66 0.00 0.00 4.35
3681 6246 2.203466 TACCGGACACGTGGGTCA 60.203 61.111 21.57 4.37 39.59 4.02
3692 6257 0.606401 CGTGGGTCAACATCTTGGCT 60.606 55.000 0.00 0.00 32.11 4.75
3695 6260 1.503542 GGTCAACATCTTGGCTGCG 59.496 57.895 0.00 0.00 32.11 5.18
3722 6287 0.764890 TGCACTACTTCAAGCAGGGT 59.235 50.000 0.00 0.00 32.48 4.34
3740 6305 0.598158 GTGAAGGTTGACGCCGTGTA 60.598 55.000 0.00 0.00 0.00 2.90
3783 6365 2.775911 TGTCTGCTGGAAGGAAGATG 57.224 50.000 0.00 0.00 29.53 2.90
3786 6368 4.033009 TGTCTGCTGGAAGGAAGATGATA 58.967 43.478 0.00 0.00 29.53 2.15
3787 6369 4.657504 TGTCTGCTGGAAGGAAGATGATAT 59.342 41.667 0.00 0.00 29.53 1.63
3788 6370 4.996122 GTCTGCTGGAAGGAAGATGATATG 59.004 45.833 0.00 0.00 29.53 1.78
3789 6371 3.748083 TGCTGGAAGGAAGATGATATGC 58.252 45.455 0.00 0.00 0.00 3.14
3790 6372 3.393609 TGCTGGAAGGAAGATGATATGCT 59.606 43.478 0.00 0.00 0.00 3.79
3807 6502 2.580962 TGCTGAACAATGCTGGTGTAA 58.419 42.857 0.00 0.00 0.00 2.41
3837 6536 5.015515 TGTCATACTGATTTTGGGATTGCA 58.984 37.500 0.00 0.00 0.00 4.08
3862 6561 1.344114 GGAACAAATTGCAGCCCTCAA 59.656 47.619 0.00 0.00 0.00 3.02
3867 6566 4.463070 ACAAATTGCAGCCCTCAAAATTT 58.537 34.783 0.00 0.00 32.20 1.82
3888 6587 1.455786 CAGACGTAAAACTGGACTGCG 59.544 52.381 0.00 0.00 0.00 5.18
3935 6634 8.023706 TGTAAATGCAGCATATTTTTGAACGTA 58.976 29.630 8.75 0.00 0.00 3.57
3988 6687 6.849502 AGTGTTGCATGATTATGTTCTTCAG 58.150 36.000 0.00 0.00 36.65 3.02
3994 6693 8.746922 TGCATGATTATGTTCTTCAGTTTTTC 57.253 30.769 0.00 0.00 36.65 2.29
4012 9802 8.175716 CAGTTTTTCTAGTGTTTTTCTCGTCTT 58.824 33.333 0.00 0.00 0.00 3.01
4049 9839 3.877508 GTCATGCTTTCTAATAGGCGGTT 59.122 43.478 0.00 0.00 0.00 4.44
4079 9870 3.547746 AGGACCTGAAAAACTTACGCAA 58.452 40.909 0.00 0.00 0.00 4.85
4096 9887 4.896080 ACGCAAATTGCAAAAGAAACAAG 58.104 34.783 18.65 0.00 45.36 3.16
4097 9888 4.629200 ACGCAAATTGCAAAAGAAACAAGA 59.371 33.333 18.65 0.00 45.36 3.02
4099 9890 5.673717 CGCAAATTGCAAAAGAAACAAGAAG 59.326 36.000 18.65 0.00 45.36 2.85
4101 9892 7.412063 GCAAATTGCAAAAGAAACAAGAAGAT 58.588 30.769 13.73 0.00 44.26 2.40
4102 9893 7.911727 GCAAATTGCAAAAGAAACAAGAAGATT 59.088 29.630 13.73 0.00 44.26 2.40
4104 9895 9.777575 AAATTGCAAAAGAAACAAGAAGATTTG 57.222 25.926 1.71 0.00 0.00 2.32
4105 9896 6.907206 TGCAAAAGAAACAAGAAGATTTGG 57.093 33.333 0.00 0.00 32.32 3.28
4106 9897 5.294060 TGCAAAAGAAACAAGAAGATTTGGC 59.706 36.000 0.00 0.00 32.32 4.52
4107 9898 5.294060 GCAAAAGAAACAAGAAGATTTGGCA 59.706 36.000 0.00 0.00 32.32 4.92
4110 9901 3.960102 AGAAACAAGAAGATTTGGCACCA 59.040 39.130 0.00 0.00 32.32 4.17
4111 9902 4.590222 AGAAACAAGAAGATTTGGCACCAT 59.410 37.500 0.00 0.00 32.32 3.55
4112 9903 3.947910 ACAAGAAGATTTGGCACCATG 57.052 42.857 0.00 0.00 32.32 3.66
4113 9904 3.233507 ACAAGAAGATTTGGCACCATGT 58.766 40.909 0.00 0.00 32.32 3.21
4114 9905 3.642848 ACAAGAAGATTTGGCACCATGTT 59.357 39.130 0.00 0.00 32.32 2.71
4115 9906 4.101430 ACAAGAAGATTTGGCACCATGTTT 59.899 37.500 0.00 0.00 32.32 2.83
4116 9907 5.304101 ACAAGAAGATTTGGCACCATGTTTA 59.696 36.000 0.00 0.00 32.32 2.01
4127 9918 3.306703 GCACCATGTTTAATTGGAATGCG 59.693 43.478 6.61 0.00 36.79 4.73
4134 9925 2.206815 TAATTGGAATGCGTGCATGC 57.793 45.000 24.20 24.20 36.68 4.06
4174 10063 1.785041 ATTCGTTGCAGCGCTGTGTT 61.785 50.000 35.80 13.25 0.00 3.32
4184 10080 3.575630 CAGCGCTGTGTTAAGTCTCTTA 58.424 45.455 29.24 0.00 0.00 2.10
4219 10115 0.548926 TCCTAGTGGTGGCAATGGGA 60.549 55.000 0.00 0.00 34.23 4.37
4220 10116 0.107017 CCTAGTGGTGGCAATGGGAG 60.107 60.000 0.00 0.00 0.00 4.30
4221 10117 0.620556 CTAGTGGTGGCAATGGGAGT 59.379 55.000 0.00 0.00 0.00 3.85
4222 10118 0.618458 TAGTGGTGGCAATGGGAGTC 59.382 55.000 0.00 0.00 0.00 3.36
4223 10119 2.040544 GTGGTGGCAATGGGAGTCG 61.041 63.158 0.00 0.00 0.00 4.18
4226 10122 3.645660 TGGCAATGGGAGTCGGCA 61.646 61.111 0.00 0.00 0.00 5.69
4227 10123 3.134127 GGCAATGGGAGTCGGCAC 61.134 66.667 0.00 0.00 0.00 5.01
4240 10136 3.578456 GGCACGTCCTGAACATGG 58.422 61.111 0.00 0.00 0.00 3.66
4242 10138 1.302511 GCACGTCCTGAACATGGGT 60.303 57.895 0.00 0.00 0.00 4.51
4243 10139 0.036765 GCACGTCCTGAACATGGGTA 60.037 55.000 0.00 0.00 0.00 3.69
4244 10140 1.722011 CACGTCCTGAACATGGGTAC 58.278 55.000 0.00 0.00 0.00 3.34
4246 10142 1.906574 ACGTCCTGAACATGGGTACAT 59.093 47.619 0.00 0.00 37.99 2.29
4247 10143 3.101437 ACGTCCTGAACATGGGTACATA 58.899 45.455 0.00 0.00 34.99 2.29
4248 10144 3.709653 ACGTCCTGAACATGGGTACATAT 59.290 43.478 0.00 0.00 34.99 1.78
4249 10145 4.058124 CGTCCTGAACATGGGTACATATG 58.942 47.826 0.00 0.00 34.99 1.78
4250 10146 4.202212 CGTCCTGAACATGGGTACATATGA 60.202 45.833 10.38 0.00 34.99 2.15
4251 10147 5.680619 GTCCTGAACATGGGTACATATGAA 58.319 41.667 10.38 0.00 34.99 2.57
4252 10148 5.527582 GTCCTGAACATGGGTACATATGAAC 59.472 44.000 10.38 0.00 34.99 3.18
4253 10149 4.511454 CCTGAACATGGGTACATATGAACG 59.489 45.833 10.38 0.00 34.99 3.95
4254 10150 3.874543 TGAACATGGGTACATATGAACGC 59.125 43.478 10.38 0.00 34.99 4.84
4255 10151 2.479837 ACATGGGTACATATGAACGCG 58.520 47.619 10.38 3.53 34.99 6.01
4257 10153 0.462375 TGGGTACATATGAACGCGCT 59.538 50.000 10.38 0.00 0.00 5.92
4259 10155 1.937899 GGGTACATATGAACGCGCTTT 59.062 47.619 10.38 0.71 0.00 3.51
4261 10157 2.033151 GGTACATATGAACGCGCTTTCC 60.033 50.000 22.14 6.26 0.00 3.13
4264 10160 2.486203 ACATATGAACGCGCTTTCCAAA 59.514 40.909 22.14 9.21 0.00 3.28
4267 10163 2.500509 TGAACGCGCTTTCCAAAAAT 57.499 40.000 22.14 0.00 0.00 1.82
4269 10165 2.124122 GAACGCGCTTTCCAAAAATGT 58.876 42.857 15.25 0.00 0.00 2.71
4270 10166 1.486439 ACGCGCTTTCCAAAAATGTG 58.514 45.000 5.73 0.00 0.00 3.21
4271 10167 1.202359 ACGCGCTTTCCAAAAATGTGT 60.202 42.857 5.73 0.00 0.00 3.72
4272 10168 2.033550 ACGCGCTTTCCAAAAATGTGTA 59.966 40.909 5.73 0.00 0.00 2.90
4273 10169 2.403698 CGCGCTTTCCAAAAATGTGTAC 59.596 45.455 5.56 0.00 0.00 2.90
4275 10171 3.313690 CGCTTTCCAAAAATGTGTACCC 58.686 45.455 0.00 0.00 0.00 3.69
4277 10173 3.313690 CTTTCCAAAAATGTGTACCCGC 58.686 45.455 0.00 0.00 0.00 6.13
4278 10174 2.279935 TCCAAAAATGTGTACCCGCT 57.720 45.000 0.00 0.00 0.00 5.52
4279 10175 2.588620 TCCAAAAATGTGTACCCGCTT 58.411 42.857 0.00 0.00 0.00 4.68
4280 10176 2.959707 TCCAAAAATGTGTACCCGCTTT 59.040 40.909 0.00 0.00 0.00 3.51
4281 10177 3.385111 TCCAAAAATGTGTACCCGCTTTT 59.615 39.130 0.00 0.00 31.87 2.27
4282 10178 4.583489 TCCAAAAATGTGTACCCGCTTTTA 59.417 37.500 0.00 0.00 30.79 1.52
4283 10179 5.068723 TCCAAAAATGTGTACCCGCTTTTAA 59.931 36.000 0.00 0.00 30.79 1.52
4284 10180 5.753921 CCAAAAATGTGTACCCGCTTTTAAA 59.246 36.000 0.00 0.00 30.79 1.52
4285 10181 6.258068 CCAAAAATGTGTACCCGCTTTTAAAA 59.742 34.615 0.00 0.00 30.79 1.52
4286 10182 7.201617 CCAAAAATGTGTACCCGCTTTTAAAAA 60.202 33.333 1.66 0.00 30.79 1.94
4314 10210 9.919348 TGTACTTTAAACGTGTTTTCTAATGTC 57.081 29.630 2.97 0.00 34.23 3.06
4315 10211 9.919348 GTACTTTAAACGTGTTTTCTAATGTCA 57.081 29.630 2.97 0.00 34.23 3.58
4317 10213 9.498307 ACTTTAAACGTGTTTTCTAATGTCAAG 57.502 29.630 2.97 0.00 34.23 3.02
4318 10214 9.710979 CTTTAAACGTGTTTTCTAATGTCAAGA 57.289 29.630 2.97 0.00 34.23 3.02
4321 10217 8.973835 AAACGTGTTTTCTAATGTCAAGAAAA 57.026 26.923 7.93 7.93 45.82 2.29
4353 10249 4.650545 AAATTTTGTGCATCATGTTCGC 57.349 36.364 0.00 0.00 0.00 4.70
4354 10250 2.789491 TTTTGTGCATCATGTTCGCA 57.211 40.000 0.00 0.00 0.00 5.10
4355 10251 2.789491 TTTGTGCATCATGTTCGCAA 57.211 40.000 7.78 7.10 37.41 4.85
4356 10252 3.300852 TTTGTGCATCATGTTCGCAAT 57.699 38.095 7.78 0.00 37.41 3.56
4357 10253 4.431661 TTTGTGCATCATGTTCGCAATA 57.568 36.364 7.78 0.00 37.41 1.90
4358 10254 4.431661 TTGTGCATCATGTTCGCAATAA 57.568 36.364 7.78 4.97 37.41 1.40
4359 10255 4.635833 TGTGCATCATGTTCGCAATAAT 57.364 36.364 7.78 0.00 37.41 1.28
4360 10256 5.747951 TGTGCATCATGTTCGCAATAATA 57.252 34.783 7.78 0.00 37.41 0.98
4361 10257 6.316440 TGTGCATCATGTTCGCAATAATAT 57.684 33.333 7.78 0.00 37.41 1.28
4362 10258 6.144175 TGTGCATCATGTTCGCAATAATATG 58.856 36.000 7.78 0.00 37.41 1.78
4363 10259 6.144854 GTGCATCATGTTCGCAATAATATGT 58.855 36.000 7.78 0.00 37.41 2.29
4364 10260 6.303970 GTGCATCATGTTCGCAATAATATGTC 59.696 38.462 7.78 0.00 37.41 3.06
4365 10261 5.796935 GCATCATGTTCGCAATAATATGTCC 59.203 40.000 0.00 0.00 31.87 4.02
4366 10262 5.590104 TCATGTTCGCAATAATATGTCCG 57.410 39.130 0.00 0.00 31.87 4.79
4367 10263 3.870723 TGTTCGCAATAATATGTCCGC 57.129 42.857 0.00 0.00 0.00 5.54
4368 10264 2.219903 TGTTCGCAATAATATGTCCGCG 59.780 45.455 0.00 0.00 43.80 6.46
4369 10265 1.424403 TCGCAATAATATGTCCGCGG 58.576 50.000 22.12 22.12 42.75 6.46
4370 10266 0.179225 CGCAATAATATGTCCGCGGC 60.179 55.000 23.51 16.75 39.09 6.53
4371 10267 0.871722 GCAATAATATGTCCGCGGCA 59.128 50.000 23.51 22.28 0.00 5.69
4372 10268 1.399727 GCAATAATATGTCCGCGGCAC 60.400 52.381 23.51 19.75 0.00 5.01
4373 10269 1.870402 CAATAATATGTCCGCGGCACA 59.130 47.619 23.51 24.72 0.00 4.57
4374 10270 2.248280 ATAATATGTCCGCGGCACAA 57.752 45.000 26.46 17.35 0.00 3.33
4375 10271 2.025589 TAATATGTCCGCGGCACAAA 57.974 45.000 26.46 15.39 0.00 2.83
4376 10272 0.732571 AATATGTCCGCGGCACAAAG 59.267 50.000 26.46 2.48 0.00 2.77
4377 10273 0.392461 ATATGTCCGCGGCACAAAGT 60.392 50.000 26.46 16.62 0.00 2.66
4378 10274 0.604243 TATGTCCGCGGCACAAAGTT 60.604 50.000 26.46 16.35 0.00 2.66
4379 10275 1.452145 ATGTCCGCGGCACAAAGTTT 61.452 50.000 26.46 12.59 0.00 2.66
4380 10276 1.065109 GTCCGCGGCACAAAGTTTT 59.935 52.632 23.51 0.00 0.00 2.43
4381 10277 1.064946 TCCGCGGCACAAAGTTTTG 59.935 52.632 23.51 3.17 43.62 2.44
4442 10338 8.391106 AGACAAATTAAGTGCTTCTAAATAGCG 58.609 33.333 0.00 0.00 41.54 4.26
4443 10339 8.040716 ACAAATTAAGTGCTTCTAAATAGCGT 57.959 30.769 0.00 0.00 41.54 5.07
4444 10340 8.512138 ACAAATTAAGTGCTTCTAAATAGCGTT 58.488 29.630 0.00 0.00 41.54 4.84
4445 10341 9.341899 CAAATTAAGTGCTTCTAAATAGCGTTT 57.658 29.630 0.00 0.00 41.54 3.60
4446 10342 9.908152 AAATTAAGTGCTTCTAAATAGCGTTTT 57.092 25.926 0.00 0.00 41.54 2.43
4447 10343 8.895932 ATTAAGTGCTTCTAAATAGCGTTTTG 57.104 30.769 0.00 0.00 41.54 2.44
4448 10344 6.554334 AAGTGCTTCTAAATAGCGTTTTGA 57.446 33.333 0.00 0.00 41.54 2.69
4449 10345 6.170675 AGTGCTTCTAAATAGCGTTTTGAG 57.829 37.500 0.00 0.00 41.54 3.02
4450 10346 5.122396 AGTGCTTCTAAATAGCGTTTTGAGG 59.878 40.000 0.00 6.75 41.54 3.86
4451 10347 4.142687 TGCTTCTAAATAGCGTTTTGAGGC 60.143 41.667 19.72 19.72 41.54 4.70
4452 10348 4.142687 GCTTCTAAATAGCGTTTTGAGGCA 60.143 41.667 20.74 3.33 0.00 4.75
4453 10349 5.449177 GCTTCTAAATAGCGTTTTGAGGCAT 60.449 40.000 20.74 0.00 0.00 4.40
4454 10350 6.238374 GCTTCTAAATAGCGTTTTGAGGCATA 60.238 38.462 20.74 2.84 0.00 3.14
4455 10351 7.618502 TTCTAAATAGCGTTTTGAGGCATAA 57.381 32.000 0.00 0.00 0.00 1.90
4456 10352 7.801716 TCTAAATAGCGTTTTGAGGCATAAT 57.198 32.000 0.00 0.00 0.00 1.28
4457 10353 8.220755 TCTAAATAGCGTTTTGAGGCATAATT 57.779 30.769 0.00 0.00 0.00 1.40
4458 10354 8.682710 TCTAAATAGCGTTTTGAGGCATAATTT 58.317 29.630 0.00 0.00 0.00 1.82
4459 10355 9.301153 CTAAATAGCGTTTTGAGGCATAATTTT 57.699 29.630 0.00 0.00 0.00 1.82
4460 10356 8.546597 AAATAGCGTTTTGAGGCATAATTTTT 57.453 26.923 0.00 0.00 0.00 1.94
4478 10374 2.307934 TTTGTCTTTTTGCACAGGCC 57.692 45.000 0.00 0.00 40.13 5.19
4479 10375 1.189752 TTGTCTTTTTGCACAGGCCA 58.810 45.000 5.01 0.00 40.13 5.36
4480 10376 1.412079 TGTCTTTTTGCACAGGCCAT 58.588 45.000 5.01 0.00 40.13 4.40
4481 10377 2.591923 TGTCTTTTTGCACAGGCCATA 58.408 42.857 5.01 0.00 40.13 2.74
4482 10378 2.961741 TGTCTTTTTGCACAGGCCATAA 59.038 40.909 5.01 0.00 40.13 1.90
4483 10379 3.386078 TGTCTTTTTGCACAGGCCATAAA 59.614 39.130 5.01 0.00 40.13 1.40
4484 10380 4.141846 TGTCTTTTTGCACAGGCCATAAAA 60.142 37.500 5.01 2.02 40.13 1.52
4485 10381 4.813697 GTCTTTTTGCACAGGCCATAAAAA 59.186 37.500 5.01 9.86 40.13 1.94
4516 10412 7.700322 TTTTTCATTAAACTTTATGCACGCA 57.300 28.000 0.00 0.00 0.00 5.24
4517 10413 6.683090 TTTCATTAAACTTTATGCACGCAC 57.317 33.333 0.00 0.00 0.00 5.34
4518 10414 5.363979 TCATTAAACTTTATGCACGCACA 57.636 34.783 0.00 0.00 0.00 4.57
4519 10415 5.948588 TCATTAAACTTTATGCACGCACAT 58.051 33.333 0.00 0.00 0.00 3.21
4520 10416 7.078011 TCATTAAACTTTATGCACGCACATA 57.922 32.000 0.00 0.00 0.00 2.29
4521 10417 7.186128 TCATTAAACTTTATGCACGCACATAG 58.814 34.615 0.00 0.00 34.15 2.23
4522 10418 6.729391 TTAAACTTTATGCACGCACATAGA 57.271 33.333 0.00 0.00 34.15 1.98
4523 10419 5.621197 AAACTTTATGCACGCACATAGAA 57.379 34.783 0.00 0.00 34.15 2.10
4524 10420 4.600012 ACTTTATGCACGCACATAGAAC 57.400 40.909 0.00 0.00 34.15 3.01
4525 10421 4.000325 ACTTTATGCACGCACATAGAACA 59.000 39.130 0.00 0.00 34.15 3.18
4526 10422 4.635765 ACTTTATGCACGCACATAGAACAT 59.364 37.500 0.00 0.00 34.15 2.71
4527 10423 4.534794 TTATGCACGCACATAGAACATG 57.465 40.909 0.00 0.00 34.15 3.21
4528 10424 1.085893 TGCACGCACATAGAACATGG 58.914 50.000 0.00 0.00 0.00 3.66
4529 10425 1.338579 TGCACGCACATAGAACATGGA 60.339 47.619 0.00 0.00 0.00 3.41
4530 10426 1.328680 GCACGCACATAGAACATGGAG 59.671 52.381 0.00 0.00 0.00 3.86
4531 10427 2.892374 CACGCACATAGAACATGGAGA 58.108 47.619 0.00 0.00 0.00 3.71
4532 10428 3.461061 CACGCACATAGAACATGGAGAT 58.539 45.455 0.00 0.00 0.00 2.75
4533 10429 3.246936 CACGCACATAGAACATGGAGATG 59.753 47.826 0.00 0.00 35.49 2.90
4534 10430 3.118629 ACGCACATAGAACATGGAGATGT 60.119 43.478 0.00 0.00 45.24 3.06
4535 10431 3.492383 CGCACATAGAACATGGAGATGTC 59.508 47.826 0.00 0.00 42.30 3.06
4536 10432 4.701765 GCACATAGAACATGGAGATGTCT 58.298 43.478 0.00 0.00 42.30 3.41
4537 10433 4.510711 GCACATAGAACATGGAGATGTCTG 59.489 45.833 0.00 0.00 42.30 3.51
4538 10434 4.510711 CACATAGAACATGGAGATGTCTGC 59.489 45.833 0.00 0.00 42.30 4.26
4539 10435 2.306341 AGAACATGGAGATGTCTGCG 57.694 50.000 0.00 0.00 42.30 5.18
4540 10436 1.552337 AGAACATGGAGATGTCTGCGT 59.448 47.619 0.00 0.00 42.30 5.24
4542 10438 2.012237 CATGGAGATGTCTGCGTGC 58.988 57.895 10.20 0.00 42.76 5.34
4543 10439 0.741927 CATGGAGATGTCTGCGTGCA 60.742 55.000 10.20 0.00 42.76 4.57
4544 10440 0.742281 ATGGAGATGTCTGCGTGCAC 60.742 55.000 6.82 6.82 37.10 4.57
4545 10441 2.103042 GGAGATGTCTGCGTGCACC 61.103 63.158 12.15 4.74 0.00 5.01
4546 10442 1.079543 GAGATGTCTGCGTGCACCT 60.080 57.895 12.15 0.00 0.00 4.00
4547 10443 0.671781 GAGATGTCTGCGTGCACCTT 60.672 55.000 12.15 0.00 0.00 3.50
4548 10444 0.250467 AGATGTCTGCGTGCACCTTT 60.250 50.000 12.15 0.00 0.00 3.11
4549 10445 0.593128 GATGTCTGCGTGCACCTTTT 59.407 50.000 12.15 0.00 0.00 2.27
4550 10446 0.593128 ATGTCTGCGTGCACCTTTTC 59.407 50.000 12.15 0.14 0.00 2.29
4551 10447 1.282875 GTCTGCGTGCACCTTTTCC 59.717 57.895 12.15 0.00 0.00 3.13
4552 10448 1.896660 TCTGCGTGCACCTTTTCCC 60.897 57.895 12.15 0.00 0.00 3.97
4553 10449 2.124109 TGCGTGCACCTTTTCCCA 60.124 55.556 12.15 0.00 0.00 4.37
4554 10450 2.133742 CTGCGTGCACCTTTTCCCAG 62.134 60.000 12.15 3.06 0.00 4.45
4555 10451 1.896660 GCGTGCACCTTTTCCCAGA 60.897 57.895 12.15 0.00 0.00 3.86
4556 10452 1.452145 GCGTGCACCTTTTCCCAGAA 61.452 55.000 12.15 0.00 0.00 3.02
4557 10453 1.247567 CGTGCACCTTTTCCCAGAAT 58.752 50.000 12.15 0.00 0.00 2.40
4558 10454 1.613437 CGTGCACCTTTTCCCAGAATT 59.387 47.619 12.15 0.00 0.00 2.17
4559 10455 2.035832 CGTGCACCTTTTCCCAGAATTT 59.964 45.455 12.15 0.00 0.00 1.82
4560 10456 3.492482 CGTGCACCTTTTCCCAGAATTTT 60.492 43.478 12.15 0.00 0.00 1.82
4561 10457 4.450976 GTGCACCTTTTCCCAGAATTTTT 58.549 39.130 5.22 0.00 0.00 1.94
4583 10479 8.822652 TTTTTGGCATTTCAAAATGTGTTTTT 57.177 23.077 14.97 0.00 45.77 1.94
4584 10480 8.458212 TTTTGGCATTTCAAAATGTGTTTTTC 57.542 26.923 14.97 0.00 45.77 2.29
4585 10481 6.748333 TGGCATTTCAAAATGTGTTTTTCA 57.252 29.167 14.97 3.18 45.77 2.69
4586 10482 7.149569 TGGCATTTCAAAATGTGTTTTTCAA 57.850 28.000 14.97 0.00 45.77 2.69
4587 10483 7.596494 TGGCATTTCAAAATGTGTTTTTCAAA 58.404 26.923 14.97 0.00 45.77 2.69
4588 10484 8.084073 TGGCATTTCAAAATGTGTTTTTCAAAA 58.916 25.926 14.97 0.00 45.77 2.44
4589 10485 9.085250 GGCATTTCAAAATGTGTTTTTCAAAAT 57.915 25.926 14.97 0.00 45.77 1.82
4590 10486 9.888637 GCATTTCAAAATGTGTTTTTCAAAATG 57.111 25.926 14.97 15.49 45.77 2.32
4592 10488 8.976986 TTTCAAAATGTGTTTTTCAAAATGGG 57.023 26.923 0.00 0.00 35.31 4.00
4593 10489 6.558909 TCAAAATGTGTTTTTCAAAATGGGC 58.441 32.000 0.00 0.00 35.31 5.36
4594 10490 6.376581 TCAAAATGTGTTTTTCAAAATGGGCT 59.623 30.769 0.00 0.00 35.31 5.19
4595 10491 6.772360 AAATGTGTTTTTCAAAATGGGCTT 57.228 29.167 0.00 0.00 0.00 4.35
4596 10492 7.872113 AAATGTGTTTTTCAAAATGGGCTTA 57.128 28.000 0.00 0.00 0.00 3.09
4597 10493 8.462589 AAATGTGTTTTTCAAAATGGGCTTAT 57.537 26.923 0.00 0.00 0.00 1.73
4598 10494 9.566432 AAATGTGTTTTTCAAAATGGGCTTATA 57.434 25.926 0.00 0.00 0.00 0.98
4599 10495 9.737844 AATGTGTTTTTCAAAATGGGCTTATAT 57.262 25.926 0.00 0.00 0.00 0.86
4600 10496 8.545229 TGTGTTTTTCAAAATGGGCTTATATG 57.455 30.769 0.00 0.00 0.00 1.78
4601 10497 8.153550 TGTGTTTTTCAAAATGGGCTTATATGT 58.846 29.630 0.00 0.00 0.00 2.29
4602 10498 9.646427 GTGTTTTTCAAAATGGGCTTATATGTA 57.354 29.630 0.00 0.00 0.00 2.29
4606 10502 8.774546 TTTCAAAATGGGCTTATATGTATCCA 57.225 30.769 0.00 0.00 0.00 3.41
4607 10503 8.408043 TTCAAAATGGGCTTATATGTATCCAG 57.592 34.615 0.00 0.00 0.00 3.86
4608 10504 7.754624 TCAAAATGGGCTTATATGTATCCAGA 58.245 34.615 0.00 0.00 0.00 3.86
4609 10505 8.393259 TCAAAATGGGCTTATATGTATCCAGAT 58.607 33.333 0.00 0.00 0.00 2.90
4610 10506 9.028284 CAAAATGGGCTTATATGTATCCAGATT 57.972 33.333 0.00 0.00 0.00 2.40
4611 10507 8.814038 AAATGGGCTTATATGTATCCAGATTC 57.186 34.615 0.00 0.00 0.00 2.52
4612 10508 6.950860 TGGGCTTATATGTATCCAGATTCA 57.049 37.500 0.00 0.00 0.00 2.57
4613 10509 7.515004 TGGGCTTATATGTATCCAGATTCAT 57.485 36.000 5.29 5.29 34.07 2.57
4614 10510 7.568349 TGGGCTTATATGTATCCAGATTCATC 58.432 38.462 3.36 0.00 32.32 2.92
4615 10511 6.995091 GGGCTTATATGTATCCAGATTCATCC 59.005 42.308 3.36 0.00 32.32 3.51
4616 10512 7.365921 GGGCTTATATGTATCCAGATTCATCCA 60.366 40.741 3.36 0.00 32.32 3.41
4617 10513 8.216423 GGCTTATATGTATCCAGATTCATCCAT 58.784 37.037 3.36 0.00 32.32 3.41
4618 10514 9.624373 GCTTATATGTATCCAGATTCATCCATT 57.376 33.333 3.36 0.00 32.32 3.16
4622 10518 6.505048 TGTATCCAGATTCATCCATTCACT 57.495 37.500 0.00 0.00 0.00 3.41
4623 10519 6.903516 TGTATCCAGATTCATCCATTCACTT 58.096 36.000 0.00 0.00 0.00 3.16
4624 10520 6.994496 TGTATCCAGATTCATCCATTCACTTC 59.006 38.462 0.00 0.00 0.00 3.01
4625 10521 4.785301 TCCAGATTCATCCATTCACTTCC 58.215 43.478 0.00 0.00 0.00 3.46
4626 10522 3.887716 CCAGATTCATCCATTCACTTCCC 59.112 47.826 0.00 0.00 0.00 3.97
4627 10523 4.529897 CAGATTCATCCATTCACTTCCCA 58.470 43.478 0.00 0.00 0.00 4.37
4628 10524 5.138276 CAGATTCATCCATTCACTTCCCAT 58.862 41.667 0.00 0.00 0.00 4.00
4629 10525 5.009710 CAGATTCATCCATTCACTTCCCATG 59.990 44.000 0.00 0.00 0.00 3.66
4630 10526 3.301794 TCATCCATTCACTTCCCATGG 57.698 47.619 4.14 4.14 39.17 3.66
4631 10527 1.684983 CATCCATTCACTTCCCATGGC 59.315 52.381 6.09 0.00 37.90 4.40
4632 10528 0.703488 TCCATTCACTTCCCATGGCA 59.297 50.000 6.09 0.00 37.90 4.92
4633 10529 1.076841 TCCATTCACTTCCCATGGCAA 59.923 47.619 6.09 0.00 37.90 4.52
4634 10530 2.112998 CCATTCACTTCCCATGGCAAT 58.887 47.619 6.09 0.00 31.32 3.56
4635 10531 2.159014 CCATTCACTTCCCATGGCAATG 60.159 50.000 6.09 6.95 31.32 2.82
4655 10551 3.700538 TGGTGGCTAAGAATGATGCTTT 58.299 40.909 0.00 0.00 0.00 3.51
4661 10557 3.249559 GCTAAGAATGATGCTTTCCCGAG 59.750 47.826 0.00 0.00 0.00 4.63
4665 10561 3.054802 AGAATGATGCTTTCCCGAGTCTT 60.055 43.478 0.00 0.00 0.00 3.01
4667 10563 1.339055 TGATGCTTTCCCGAGTCTTGG 60.339 52.381 0.00 0.00 0.00 3.61
4668 10564 0.693049 ATGCTTTCCCGAGTCTTGGT 59.307 50.000 5.35 0.00 0.00 3.67
4670 10566 0.673956 GCTTTCCCGAGTCTTGGTCC 60.674 60.000 5.35 0.00 0.00 4.46
4698 10955 2.368329 GGCATAGAGGGTGGGGGT 60.368 66.667 0.00 0.00 0.00 4.95
4700 10957 1.227383 GCATAGAGGGTGGGGGTTG 59.773 63.158 0.00 0.00 0.00 3.77
4701 10958 1.571773 GCATAGAGGGTGGGGGTTGT 61.572 60.000 0.00 0.00 0.00 3.32
4702 10959 0.546598 CATAGAGGGTGGGGGTTGTC 59.453 60.000 0.00 0.00 0.00 3.18
4754 11012 6.494893 TCTGGTTGCATCTTTGTGTTATAC 57.505 37.500 0.00 0.00 0.00 1.47
4756 11014 6.371548 TCTGGTTGCATCTTTGTGTTATACTC 59.628 38.462 0.00 0.00 0.00 2.59
4757 11015 6.237901 TGGTTGCATCTTTGTGTTATACTCT 58.762 36.000 0.00 0.00 0.00 3.24
4758 11016 6.371548 TGGTTGCATCTTTGTGTTATACTCTC 59.628 38.462 0.00 0.00 0.00 3.20
4759 11017 6.595716 GGTTGCATCTTTGTGTTATACTCTCT 59.404 38.462 0.00 0.00 0.00 3.10
4760 11018 7.201565 GGTTGCATCTTTGTGTTATACTCTCTC 60.202 40.741 0.00 0.00 0.00 3.20
4761 11019 6.341316 TGCATCTTTGTGTTATACTCTCTCC 58.659 40.000 0.00 0.00 0.00 3.71
4762 11020 5.460419 GCATCTTTGTGTTATACTCTCTCCG 59.540 44.000 0.00 0.00 0.00 4.63
4764 11022 6.585695 TCTTTGTGTTATACTCTCTCCGTT 57.414 37.500 0.00 0.00 0.00 4.44
4765 11023 6.618811 TCTTTGTGTTATACTCTCTCCGTTC 58.381 40.000 0.00 0.00 0.00 3.95
4766 11024 4.978083 TGTGTTATACTCTCTCCGTTCC 57.022 45.455 0.00 0.00 0.00 3.62
4767 11025 4.597004 TGTGTTATACTCTCTCCGTTCCT 58.403 43.478 0.00 0.00 0.00 3.36
4768 11026 5.748402 TGTGTTATACTCTCTCCGTTCCTA 58.252 41.667 0.00 0.00 0.00 2.94
4771 11029 7.341256 TGTGTTATACTCTCTCCGTTCCTAAAT 59.659 37.037 0.00 0.00 0.00 1.40
4773 11031 9.584008 TGTTATACTCTCTCCGTTCCTAAATAT 57.416 33.333 0.00 0.00 0.00 1.28
4777 11035 9.810870 ATACTCTCTCCGTTCCTAAATATAAGT 57.189 33.333 0.00 0.00 0.00 2.24
4778 11036 8.168790 ACTCTCTCCGTTCCTAAATATAAGTC 57.831 38.462 0.00 0.00 0.00 3.01
4780 11038 8.763984 TCTCTCCGTTCCTAAATATAAGTCTT 57.236 34.615 0.00 0.00 0.00 3.01
4781 11039 9.198475 TCTCTCCGTTCCTAAATATAAGTCTTT 57.802 33.333 0.00 0.00 0.00 2.52
4800 11058 9.520515 AAGTCTTTTTAGAGCTTCAAATATGGA 57.479 29.630 0.00 0.00 0.00 3.41
4801 11059 8.951243 AGTCTTTTTAGAGCTTCAAATATGGAC 58.049 33.333 0.00 0.00 0.00 4.02
4802 11060 8.730680 GTCTTTTTAGAGCTTCAAATATGGACA 58.269 33.333 0.00 0.00 0.00 4.02
4803 11061 9.295825 TCTTTTTAGAGCTTCAAATATGGACAA 57.704 29.630 0.00 0.00 0.00 3.18
4804 11062 9.346725 CTTTTTAGAGCTTCAAATATGGACAAC 57.653 33.333 0.00 0.00 0.00 3.32
4805 11063 7.994425 TTTAGAGCTTCAAATATGGACAACA 57.006 32.000 0.00 0.00 0.00 3.33
4806 11064 8.579850 TTTAGAGCTTCAAATATGGACAACAT 57.420 30.769 0.00 0.00 43.68 2.71
4807 11065 8.579850 TTAGAGCTTCAAATATGGACAACATT 57.420 30.769 0.00 0.00 41.03 2.71
4808 11066 7.093322 AGAGCTTCAAATATGGACAACATTC 57.907 36.000 0.00 0.00 41.03 2.67
4809 11067 5.883661 AGCTTCAAATATGGACAACATTCG 58.116 37.500 0.00 0.00 41.03 3.34
4810 11068 5.036737 GCTTCAAATATGGACAACATTCGG 58.963 41.667 0.00 0.00 41.03 4.30
4811 11069 5.163663 GCTTCAAATATGGACAACATTCGGA 60.164 40.000 0.00 0.00 41.03 4.55
4812 11070 6.460123 GCTTCAAATATGGACAACATTCGGAT 60.460 38.462 0.00 0.00 41.03 4.18
4813 11071 7.403312 TTCAAATATGGACAACATTCGGATT 57.597 32.000 0.00 0.00 41.03 3.01
4814 11072 8.512966 TTCAAATATGGACAACATTCGGATTA 57.487 30.769 0.00 0.00 41.03 1.75
4815 11073 8.512966 TCAAATATGGACAACATTCGGATTAA 57.487 30.769 0.00 0.00 41.03 1.40
4816 11074 8.961634 TCAAATATGGACAACATTCGGATTAAA 58.038 29.630 0.00 0.00 41.03 1.52
4817 11075 9.579768 CAAATATGGACAACATTCGGATTAAAA 57.420 29.630 0.00 0.00 41.03 1.52
4819 11077 9.748708 AATATGGACAACATTCGGATTAAAATG 57.251 29.630 0.00 0.00 41.03 2.32
4820 11078 6.825944 TGGACAACATTCGGATTAAAATGA 57.174 33.333 4.92 0.00 36.57 2.57
4821 11079 6.851609 TGGACAACATTCGGATTAAAATGAG 58.148 36.000 4.92 0.98 36.57 2.90
4822 11080 6.432783 TGGACAACATTCGGATTAAAATGAGT 59.567 34.615 4.92 3.51 36.57 3.41
4823 11081 6.747280 GGACAACATTCGGATTAAAATGAGTG 59.253 38.462 4.92 5.17 36.57 3.51
4824 11082 7.361713 GGACAACATTCGGATTAAAATGAGTGA 60.362 37.037 4.92 0.00 36.57 3.41
4825 11083 7.881142 ACAACATTCGGATTAAAATGAGTGAA 58.119 30.769 4.92 0.00 36.57 3.18
4826 11084 8.522830 ACAACATTCGGATTAAAATGAGTGAAT 58.477 29.630 4.92 0.00 36.57 2.57
4827 11085 9.357652 CAACATTCGGATTAAAATGAGTGAATT 57.642 29.630 4.92 0.00 36.57 2.17
4828 11086 9.927668 AACATTCGGATTAAAATGAGTGAATTT 57.072 25.926 4.92 0.00 36.57 1.82
4832 11090 9.834628 TTCGGATTAAAATGAGTGAATTTACAC 57.165 29.630 2.93 0.00 40.60 2.90
4846 11104 9.924650 AGTGAATTTACACTCTAAATTACGTCT 57.075 29.630 2.93 0.00 46.36 4.18
4900 11158 9.755122 AAATCTCTAAAAGGGCTTGTATTTAGT 57.245 29.630 0.00 0.00 36.93 2.24
4903 11161 9.662947 TCTCTAAAAGGGCTTGTATTTAGTAAC 57.337 33.333 0.00 0.00 36.93 2.50
4904 11162 8.483307 TCTAAAAGGGCTTGTATTTAGTAACG 57.517 34.615 0.00 0.00 36.93 3.18
4905 11163 6.505044 AAAAGGGCTTGTATTTAGTAACGG 57.495 37.500 0.00 0.00 0.00 4.44
4906 11164 5.425196 AAGGGCTTGTATTTAGTAACGGA 57.575 39.130 0.00 0.00 0.00 4.69
4907 11165 5.019785 AGGGCTTGTATTTAGTAACGGAG 57.980 43.478 0.00 0.00 0.00 4.63
4908 11166 4.124970 GGGCTTGTATTTAGTAACGGAGG 58.875 47.826 0.00 0.00 0.00 4.30
4909 11167 4.124970 GGCTTGTATTTAGTAACGGAGGG 58.875 47.826 0.00 0.00 0.00 4.30
4910 11168 4.141869 GGCTTGTATTTAGTAACGGAGGGA 60.142 45.833 0.00 0.00 0.00 4.20
4911 11169 5.048507 GCTTGTATTTAGTAACGGAGGGAG 58.951 45.833 0.00 0.00 0.00 4.30
4912 11170 5.394993 GCTTGTATTTAGTAACGGAGGGAGT 60.395 44.000 0.00 0.00 0.00 3.85
4913 11171 6.183360 GCTTGTATTTAGTAACGGAGGGAGTA 60.183 42.308 0.00 0.00 0.00 2.59
4914 11172 6.699575 TGTATTTAGTAACGGAGGGAGTAC 57.300 41.667 0.00 0.00 0.00 2.73
4915 11173 6.426587 TGTATTTAGTAACGGAGGGAGTACT 58.573 40.000 0.00 0.00 0.00 2.73
4916 11174 6.543831 TGTATTTAGTAACGGAGGGAGTACTC 59.456 42.308 14.87 14.87 36.76 2.59
4927 11185 0.455005 GGAGTACTCCTTTCGTCCGG 59.545 60.000 31.12 0.00 46.16 5.14
4928 11186 1.172175 GAGTACTCCTTTCGTCCGGT 58.828 55.000 12.13 0.00 0.00 5.28
4929 11187 2.359900 GAGTACTCCTTTCGTCCGGTA 58.640 52.381 12.13 0.00 0.00 4.02
4930 11188 2.948315 GAGTACTCCTTTCGTCCGGTAT 59.052 50.000 12.13 0.00 0.00 2.73
4931 11189 3.359950 AGTACTCCTTTCGTCCGGTATT 58.640 45.455 0.00 0.00 0.00 1.89
4932 11190 4.526970 AGTACTCCTTTCGTCCGGTATTA 58.473 43.478 0.00 0.00 0.00 0.98
4933 11191 3.790152 ACTCCTTTCGTCCGGTATTAC 57.210 47.619 0.00 0.00 0.00 1.89
4934 11192 3.359950 ACTCCTTTCGTCCGGTATTACT 58.640 45.455 0.00 0.00 0.00 2.24
4935 11193 3.766051 ACTCCTTTCGTCCGGTATTACTT 59.234 43.478 0.00 0.00 0.00 2.24
4936 11194 4.110482 CTCCTTTCGTCCGGTATTACTTG 58.890 47.826 0.00 0.00 0.00 3.16
4937 11195 3.511146 TCCTTTCGTCCGGTATTACTTGT 59.489 43.478 0.00 0.00 0.00 3.16
4938 11196 3.861689 CCTTTCGTCCGGTATTACTTGTC 59.138 47.826 0.00 0.00 0.00 3.18
4939 11197 2.830772 TCGTCCGGTATTACTTGTCG 57.169 50.000 0.00 0.00 0.00 4.35
4940 11198 1.194495 CGTCCGGTATTACTTGTCGC 58.806 55.000 0.00 0.00 0.00 5.19
4941 11199 1.194495 GTCCGGTATTACTTGTCGCG 58.806 55.000 0.00 0.00 0.00 5.87
4942 11200 1.093972 TCCGGTATTACTTGTCGCGA 58.906 50.000 3.71 3.71 0.00 5.87
4943 11201 1.472082 TCCGGTATTACTTGTCGCGAA 59.528 47.619 12.06 0.00 0.00 4.70
4944 11202 2.094803 TCCGGTATTACTTGTCGCGAAA 60.095 45.455 12.06 0.54 0.00 3.46
4945 11203 2.667481 CCGGTATTACTTGTCGCGAAAA 59.333 45.455 12.06 12.01 0.00 2.29
4946 11204 3.307782 CCGGTATTACTTGTCGCGAAAAT 59.692 43.478 13.05 9.24 0.00 1.82
4947 11205 4.503734 CCGGTATTACTTGTCGCGAAAATA 59.496 41.667 13.05 8.32 0.00 1.40
4948 11206 5.332055 CCGGTATTACTTGTCGCGAAAATAG 60.332 44.000 13.05 4.10 0.00 1.73
4949 11207 5.456497 CGGTATTACTTGTCGCGAAAATAGA 59.544 40.000 13.05 1.50 0.00 1.98
4950 11208 6.143438 CGGTATTACTTGTCGCGAAAATAGAT 59.857 38.462 13.05 8.95 0.00 1.98
4951 11209 7.281484 GGTATTACTTGTCGCGAAAATAGATG 58.719 38.462 13.05 2.76 0.00 2.90
4952 11210 6.903883 ATTACTTGTCGCGAAAATAGATGT 57.096 33.333 13.05 9.04 0.00 3.06
4953 11211 7.997107 ATTACTTGTCGCGAAAATAGATGTA 57.003 32.000 13.05 8.01 0.00 2.29
4954 11212 7.997107 TTACTTGTCGCGAAAATAGATGTAT 57.003 32.000 13.05 0.00 0.00 2.29
4955 11213 6.512177 ACTTGTCGCGAAAATAGATGTATC 57.488 37.500 13.05 0.00 0.00 2.24
4956 11214 6.273825 ACTTGTCGCGAAAATAGATGTATCT 58.726 36.000 13.05 0.00 40.86 1.98
4957 11215 7.423199 ACTTGTCGCGAAAATAGATGTATCTA 58.577 34.615 13.05 4.22 43.00 1.98
4958 11216 7.378995 ACTTGTCGCGAAAATAGATGTATCTAC 59.621 37.037 13.05 0.00 41.77 2.59
4959 11217 6.731164 TGTCGCGAAAATAGATGTATCTACA 58.269 36.000 12.06 0.00 41.77 2.74
4960 11218 6.635641 TGTCGCGAAAATAGATGTATCTACAC 59.364 38.462 12.06 0.00 41.77 2.90
4961 11219 6.635641 GTCGCGAAAATAGATGTATCTACACA 59.364 38.462 12.06 0.00 41.77 3.72
4962 11220 7.326305 GTCGCGAAAATAGATGTATCTACACAT 59.674 37.037 12.06 0.00 41.77 3.21
4963 11221 8.508875 TCGCGAAAATAGATGTATCTACACATA 58.491 33.333 6.20 0.00 41.77 2.29
4964 11222 9.290483 CGCGAAAATAGATGTATCTACACATAT 57.710 33.333 0.00 0.00 41.77 1.78
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 5.221925 ACTCTCATGTTGGTGGTTATTCACT 60.222 40.000 0.00 0.00 37.75 3.41
25 26 3.244770 GGGAACTCTCATGTTGGTGGTTA 60.245 47.826 0.00 0.00 0.00 2.85
27 28 1.073923 GGGAACTCTCATGTTGGTGGT 59.926 52.381 0.00 0.00 0.00 4.16
32 33 1.952367 GCAGGGGGAACTCTCATGTTG 60.952 57.143 0.00 0.00 34.38 3.33
45 46 2.322081 CGTTACGTTGTGCAGGGGG 61.322 63.158 0.00 0.00 0.00 5.40
111 112 1.126113 CGAACCGAATTTCTGACGTGG 59.874 52.381 0.00 0.00 0.00 4.94
114 115 2.534939 GCATCGAACCGAATTTCTGACG 60.535 50.000 0.00 0.00 39.99 4.35
117 118 3.469899 TTGCATCGAACCGAATTTCTG 57.530 42.857 0.00 0.00 39.99 3.02
118 119 4.497473 TTTTGCATCGAACCGAATTTCT 57.503 36.364 0.00 0.00 39.99 2.52
119 120 4.621034 ACATTTTGCATCGAACCGAATTTC 59.379 37.500 0.00 0.00 39.99 2.17
120 121 4.555262 ACATTTTGCATCGAACCGAATTT 58.445 34.783 0.00 0.00 39.99 1.82
121 122 4.165779 GACATTTTGCATCGAACCGAATT 58.834 39.130 0.00 0.00 39.99 2.17
122 123 3.190327 TGACATTTTGCATCGAACCGAAT 59.810 39.130 0.00 0.00 39.99 3.34
123 124 2.550180 TGACATTTTGCATCGAACCGAA 59.450 40.909 0.00 0.00 39.99 4.30
124 125 2.147150 TGACATTTTGCATCGAACCGA 58.853 42.857 0.00 0.00 41.13 4.69
125 126 2.610219 TGACATTTTGCATCGAACCG 57.390 45.000 0.00 0.00 0.00 4.44
181 744 9.617523 TCACACAAGTATATTGATCACATTCAT 57.382 29.630 0.00 0.00 0.00 2.57
182 745 9.101655 CTCACACAAGTATATTGATCACATTCA 57.898 33.333 0.00 0.00 0.00 2.57
183 746 8.554528 CCTCACACAAGTATATTGATCACATTC 58.445 37.037 0.00 0.00 0.00 2.67
187 750 6.238211 GCACCTCACACAAGTATATTGATCAC 60.238 42.308 0.00 0.00 0.00 3.06
203 766 2.992593 TGTTTGTACAAGCACCTCACA 58.007 42.857 19.74 11.32 0.00 3.58
351 921 0.033601 AGGAGACGAGGCTGACTGAT 60.034 55.000 0.00 0.00 0.00 2.90
352 922 0.962855 CAGGAGACGAGGCTGACTGA 60.963 60.000 0.00 0.00 0.00 3.41
356 926 1.032657 GCTACAGGAGACGAGGCTGA 61.033 60.000 0.00 0.00 0.00 4.26
414 984 1.098050 GTGCCATCGCCTCATCTTTT 58.902 50.000 0.00 0.00 0.00 2.27
483 1053 1.142748 CACCGCAACAGGGCAAAAA 59.857 52.632 0.00 0.00 35.02 1.94
492 1062 0.684535 TCTCCTTCATCACCGCAACA 59.315 50.000 0.00 0.00 0.00 3.33
505 1075 0.600557 CGCCGCTATCATCTCTCCTT 59.399 55.000 0.00 0.00 0.00 3.36
575 1145 6.884295 CACCAGGAGTAAAAATTACATCCAGA 59.116 38.462 15.05 0.00 0.00 3.86
684 1272 8.901472 TTAGTATGTCTTCATCCCATATAGCT 57.099 34.615 0.00 0.00 35.70 3.32
689 1277 6.929049 CGCTTTTAGTATGTCTTCATCCCATA 59.071 38.462 0.00 0.00 35.70 2.74
779 1380 5.065474 GGCACAACCGCATACTTAAATCTTA 59.935 40.000 0.00 0.00 0.00 2.10
795 1396 0.465460 TTCACTGGAGTGGCACAACC 60.465 55.000 21.41 21.36 44.16 3.77
846 1447 3.426191 CACAAATGACCGTGCAATGAAAG 59.574 43.478 0.00 0.00 0.00 2.62
847 1448 3.379240 CACAAATGACCGTGCAATGAAA 58.621 40.909 0.00 0.00 0.00 2.69
848 1449 3.010624 CACAAATGACCGTGCAATGAA 57.989 42.857 0.00 0.00 0.00 2.57
849 1450 2.702898 CACAAATGACCGTGCAATGA 57.297 45.000 0.00 0.00 0.00 2.57
922 1526 8.885346 AGAGAGAGAAGGGAAGAAAAGATTTTA 58.115 33.333 0.00 0.00 0.00 1.52
926 1530 5.127031 CGAGAGAGAGAAGGGAAGAAAAGAT 59.873 44.000 0.00 0.00 0.00 2.40
927 1531 4.461081 CGAGAGAGAGAAGGGAAGAAAAGA 59.539 45.833 0.00 0.00 0.00 2.52
928 1532 4.219725 ACGAGAGAGAGAAGGGAAGAAAAG 59.780 45.833 0.00 0.00 0.00 2.27
932 1536 2.574369 AGACGAGAGAGAGAAGGGAAGA 59.426 50.000 0.00 0.00 0.00 2.87
933 1537 2.943033 GAGACGAGAGAGAGAAGGGAAG 59.057 54.545 0.00 0.00 0.00 3.46
1020 1625 2.445654 GGGAGGAGGAGGAGCAGG 60.446 72.222 0.00 0.00 0.00 4.85
1179 1922 1.019650 ATGACTGGGAGTAGAGGGGT 58.980 55.000 0.00 0.00 0.00 4.95
1189 1932 2.308722 GGAAGGGGCATGACTGGGA 61.309 63.158 0.00 0.00 0.00 4.37
1197 1940 3.978193 TTGCGGTGGAAGGGGCAT 61.978 61.111 0.00 0.00 35.03 4.40
1525 2277 1.827969 ACTGAGCAGAGATGGTGGTAC 59.172 52.381 4.21 0.00 0.00 3.34
1829 3768 8.591072 ACCCGAATTATCTTCCGAGAATATTTA 58.409 33.333 0.00 0.00 35.07 1.40
1914 4272 1.734465 GAAGCCAACCACAGATCTTCG 59.266 52.381 0.00 0.00 0.00 3.79
2061 4420 2.281970 TGCTCAGCAGCCAACCAG 60.282 61.111 0.00 0.00 46.26 4.00
2081 4440 3.128349 TCGGCAGACAAAACTACAGAAC 58.872 45.455 0.00 0.00 0.00 3.01
2180 4566 2.036346 ACTTCTGCAACTGGAAAATGCC 59.964 45.455 0.00 0.00 39.31 4.40
2347 4747 9.693739 ACATATGGATATAGGAAACAAAACACA 57.306 29.630 7.80 0.00 0.00 3.72
2472 4873 6.315642 AGTTGAAATGTCAGATGCTATCAGTG 59.684 38.462 0.00 0.00 34.49 3.66
2751 5175 3.112580 GCGTGCACACAGTAACAAAATT 58.887 40.909 18.64 0.00 0.00 1.82
2752 5176 2.357637 AGCGTGCACACAGTAACAAAAT 59.642 40.909 18.64 0.00 0.00 1.82
2805 5276 6.426646 AACTCATGAAGAAACTCAGTACCT 57.573 37.500 0.00 0.00 0.00 3.08
2902 5451 5.500645 AGGCTTTTTCTAGACACAAACAC 57.499 39.130 0.00 0.00 0.00 3.32
3004 5555 3.635331 CAATACACATTGCCATGCTAGC 58.365 45.455 8.10 8.10 35.44 3.42
3088 5648 2.614057 CCCACCTGATAATGAGAAACGC 59.386 50.000 0.00 0.00 0.00 4.84
3132 5694 2.707257 TCGGTAGAAAACAAGGGGAGTT 59.293 45.455 0.00 0.00 0.00 3.01
3692 6257 1.809619 GTAGTGCAAGATCCGCGCA 60.810 57.895 17.65 8.76 42.36 6.09
3695 6260 2.010145 TGAAGTAGTGCAAGATCCGC 57.990 50.000 0.00 0.00 0.00 5.54
3722 6287 0.598158 GTACACGGCGTCAACCTTCA 60.598 55.000 10.85 0.00 0.00 3.02
3740 6305 1.302033 CAGGCCTGAACTTCAGCGT 60.302 57.895 29.88 7.64 42.98 5.07
3783 6365 3.379372 ACACCAGCATTGTTCAGCATATC 59.621 43.478 0.00 0.00 0.00 1.63
3786 6368 1.624336 ACACCAGCATTGTTCAGCAT 58.376 45.000 0.00 0.00 0.00 3.79
3787 6369 2.268762 TACACCAGCATTGTTCAGCA 57.731 45.000 0.00 0.00 0.00 4.41
3788 6370 3.855689 ATTACACCAGCATTGTTCAGC 57.144 42.857 0.00 0.00 0.00 4.26
3789 6371 4.022068 ACCAATTACACCAGCATTGTTCAG 60.022 41.667 0.00 0.00 0.00 3.02
3790 6372 3.894427 ACCAATTACACCAGCATTGTTCA 59.106 39.130 0.00 0.00 0.00 3.18
3837 6536 2.485302 GGGCTGCAATTTGTTCCAAAGT 60.485 45.455 0.50 0.00 0.00 2.66
3862 6561 6.725246 CAGTCCAGTTTTACGTCTGAAATTT 58.275 36.000 3.69 0.00 34.02 1.82
3867 6566 2.750948 GCAGTCCAGTTTTACGTCTGA 58.249 47.619 3.69 0.00 34.02 3.27
3888 6587 4.642885 ACAGTTACAGAGAGATGCCTAGTC 59.357 45.833 0.00 0.00 0.00 2.59
3988 6687 7.639072 GGAAGACGAGAAAAACACTAGAAAAAC 59.361 37.037 0.00 0.00 0.00 2.43
3994 6693 5.631512 CAGAGGAAGACGAGAAAAACACTAG 59.368 44.000 0.00 0.00 0.00 2.57
3996 6695 4.099573 TCAGAGGAAGACGAGAAAAACACT 59.900 41.667 0.00 0.00 0.00 3.55
3997 6696 4.209495 GTCAGAGGAAGACGAGAAAAACAC 59.791 45.833 0.00 0.00 0.00 3.32
4003 9793 2.554462 CAGTGTCAGAGGAAGACGAGAA 59.446 50.000 0.00 0.00 38.83 2.87
4012 9802 3.131850 TGACTGCAGTGTCAGAGGA 57.868 52.632 27.27 0.00 41.43 3.71
4061 9851 4.506288 GCAATTTGCGTAAGTTTTTCAGGT 59.494 37.500 5.49 0.00 41.68 4.00
4079 9870 8.400186 CCAAATCTTCTTGTTTCTTTTGCAATT 58.600 29.630 0.00 0.00 0.00 2.32
4096 9887 6.092533 CCAATTAAACATGGTGCCAAATCTTC 59.907 38.462 0.00 0.00 31.84 2.87
4097 9888 5.939296 CCAATTAAACATGGTGCCAAATCTT 59.061 36.000 0.00 0.00 31.84 2.40
4099 9890 5.486526 TCCAATTAAACATGGTGCCAAATC 58.513 37.500 0.00 0.00 37.94 2.17
4101 9892 4.963318 TCCAATTAAACATGGTGCCAAA 57.037 36.364 0.00 0.00 37.94 3.28
4102 9893 4.963318 TTCCAATTAAACATGGTGCCAA 57.037 36.364 0.00 0.00 37.94 4.52
4104 9895 3.622612 GCATTCCAATTAAACATGGTGCC 59.377 43.478 0.00 0.00 34.39 5.01
4105 9896 3.306703 CGCATTCCAATTAAACATGGTGC 59.693 43.478 0.00 9.20 37.94 5.01
4106 9897 4.326817 CACGCATTCCAATTAAACATGGTG 59.673 41.667 0.00 0.56 37.94 4.17
4107 9898 4.493547 CACGCATTCCAATTAAACATGGT 58.506 39.130 0.00 0.00 37.94 3.55
4110 9901 4.185467 TGCACGCATTCCAATTAAACAT 57.815 36.364 0.00 0.00 0.00 2.71
4111 9902 3.650070 TGCACGCATTCCAATTAAACA 57.350 38.095 0.00 0.00 0.00 2.83
4112 9903 3.242059 GCATGCACGCATTCCAATTAAAC 60.242 43.478 14.21 0.00 33.90 2.01
4113 9904 2.928757 GCATGCACGCATTCCAATTAAA 59.071 40.909 14.21 0.00 33.90 1.52
4114 9905 2.094338 TGCATGCACGCATTCCAATTAA 60.094 40.909 18.46 0.00 36.86 1.40
4115 9906 1.475682 TGCATGCACGCATTCCAATTA 59.524 42.857 18.46 0.00 36.86 1.40
4116 9907 0.246910 TGCATGCACGCATTCCAATT 59.753 45.000 18.46 0.00 36.86 2.32
4146 9937 3.497118 CGCTGCAACGAATTTTGGATTA 58.503 40.909 2.68 0.00 34.06 1.75
4157 10046 1.154814 TTAACACAGCGCTGCAACGA 61.155 50.000 36.28 17.49 34.06 3.85
4219 10115 1.816863 ATGTTCAGGACGTGCCGACT 61.817 55.000 2.38 0.00 43.43 4.18
4220 10116 1.374252 ATGTTCAGGACGTGCCGAC 60.374 57.895 2.38 0.53 43.43 4.79
4221 10117 1.374125 CATGTTCAGGACGTGCCGA 60.374 57.895 2.38 0.00 43.43 5.54
4222 10118 2.390599 CCATGTTCAGGACGTGCCG 61.391 63.158 2.38 0.00 42.74 5.69
4223 10119 2.040544 CCCATGTTCAGGACGTGCC 61.041 63.158 2.38 0.00 42.74 5.01
4226 10122 1.344065 TGTACCCATGTTCAGGACGT 58.656 50.000 0.00 0.00 0.00 4.34
4227 10123 2.691409 ATGTACCCATGTTCAGGACG 57.309 50.000 0.00 0.00 0.00 4.79
4228 10124 5.290493 TCATATGTACCCATGTTCAGGAC 57.710 43.478 1.90 0.00 32.29 3.85
4229 10125 5.680619 GTTCATATGTACCCATGTTCAGGA 58.319 41.667 1.90 0.00 32.29 3.86
4230 10126 4.511454 CGTTCATATGTACCCATGTTCAGG 59.489 45.833 6.87 0.00 32.29 3.86
4231 10127 4.024893 GCGTTCATATGTACCCATGTTCAG 60.025 45.833 6.87 0.00 32.29 3.02
4232 10128 3.874543 GCGTTCATATGTACCCATGTTCA 59.125 43.478 6.87 0.00 32.29 3.18
4233 10129 3.059868 CGCGTTCATATGTACCCATGTTC 60.060 47.826 6.87 0.00 32.29 3.18
4234 10130 2.869801 CGCGTTCATATGTACCCATGTT 59.130 45.455 6.87 0.00 32.29 2.71
4235 10131 2.479837 CGCGTTCATATGTACCCATGT 58.520 47.619 6.87 0.00 32.29 3.21
4236 10132 1.194547 GCGCGTTCATATGTACCCATG 59.805 52.381 8.43 0.00 32.29 3.66
4238 10134 0.462375 AGCGCGTTCATATGTACCCA 59.538 50.000 8.43 0.00 0.00 4.51
4239 10135 1.578583 AAGCGCGTTCATATGTACCC 58.421 50.000 8.43 0.00 0.00 3.69
4240 10136 2.033151 GGAAAGCGCGTTCATATGTACC 60.033 50.000 31.76 13.30 0.00 3.34
4242 10138 2.894902 TGGAAAGCGCGTTCATATGTA 58.105 42.857 31.76 11.83 0.00 2.29
4243 10139 1.732941 TGGAAAGCGCGTTCATATGT 58.267 45.000 31.76 0.00 0.00 2.29
4244 10140 2.823196 TTGGAAAGCGCGTTCATATG 57.177 45.000 31.76 0.00 0.00 1.78
4246 10142 3.627732 TTTTTGGAAAGCGCGTTCATA 57.372 38.095 31.76 19.90 0.00 2.15
4247 10143 2.500509 TTTTTGGAAAGCGCGTTCAT 57.499 40.000 31.76 1.66 0.00 2.57
4248 10144 2.123342 CATTTTTGGAAAGCGCGTTCA 58.877 42.857 31.76 18.12 0.00 3.18
4249 10145 2.097444 CACATTTTTGGAAAGCGCGTTC 60.097 45.455 25.21 25.21 0.00 3.95
4250 10146 1.857837 CACATTTTTGGAAAGCGCGTT 59.142 42.857 8.72 8.72 0.00 4.84
4251 10147 1.202359 ACACATTTTTGGAAAGCGCGT 60.202 42.857 8.43 0.00 0.00 6.01
4252 10148 1.486439 ACACATTTTTGGAAAGCGCG 58.514 45.000 0.00 0.00 0.00 6.86
4253 10149 2.729360 GGTACACATTTTTGGAAAGCGC 59.271 45.455 0.00 0.00 0.00 5.92
4254 10150 3.313690 GGGTACACATTTTTGGAAAGCG 58.686 45.455 0.00 0.00 0.00 4.68
4255 10151 3.313690 CGGGTACACATTTTTGGAAAGC 58.686 45.455 0.00 0.00 0.00 3.51
4257 10153 2.959707 AGCGGGTACACATTTTTGGAAA 59.040 40.909 0.00 0.00 0.00 3.13
4259 10155 2.279935 AGCGGGTACACATTTTTGGA 57.720 45.000 0.00 0.00 0.00 3.53
4261 10157 6.830114 TTTAAAAGCGGGTACACATTTTTG 57.170 33.333 11.93 0.00 0.00 2.44
4288 10184 9.919348 GACATTAGAAAACACGTTTAAAGTACA 57.081 29.630 0.00 0.00 31.63 2.90
4289 10185 9.919348 TGACATTAGAAAACACGTTTAAAGTAC 57.081 29.630 0.00 0.00 31.63 2.73
4291 10187 9.498307 CTTGACATTAGAAAACACGTTTAAAGT 57.502 29.630 0.00 0.00 31.63 2.66
4292 10188 9.710979 TCTTGACATTAGAAAACACGTTTAAAG 57.289 29.630 0.00 0.00 31.63 1.85
4296 10192 8.973835 TTTTCTTGACATTAGAAAACACGTTT 57.026 26.923 9.88 0.00 43.17 3.60
4297 10193 8.973835 TTTTTCTTGACATTAGAAAACACGTT 57.026 26.923 12.52 0.00 45.95 3.99
4330 10226 4.841841 GCGAACATGATGCACAAAATTTTG 59.158 37.500 25.73 25.73 43.62 2.44
4331 10227 4.510711 TGCGAACATGATGCACAAAATTTT 59.489 33.333 0.00 0.00 32.86 1.82
4332 10228 4.056740 TGCGAACATGATGCACAAAATTT 58.943 34.783 0.00 0.00 32.86 1.82
4333 10229 3.651206 TGCGAACATGATGCACAAAATT 58.349 36.364 0.00 0.00 32.86 1.82
4334 10230 3.300852 TGCGAACATGATGCACAAAAT 57.699 38.095 0.00 0.00 32.86 1.82
4335 10231 2.789491 TGCGAACATGATGCACAAAA 57.211 40.000 0.00 0.00 32.86 2.44
4336 10232 2.789491 TTGCGAACATGATGCACAAA 57.211 40.000 0.00 0.00 38.55 2.83
4337 10233 4.431661 TTATTGCGAACATGATGCACAA 57.568 36.364 0.00 0.00 38.55 3.33
4338 10234 4.635833 ATTATTGCGAACATGATGCACA 57.364 36.364 0.00 0.00 38.55 4.57
4339 10235 6.144854 ACATATTATTGCGAACATGATGCAC 58.855 36.000 0.00 0.00 38.55 4.57
4340 10236 6.316440 ACATATTATTGCGAACATGATGCA 57.684 33.333 0.00 3.19 36.72 3.96
4341 10237 5.796935 GGACATATTATTGCGAACATGATGC 59.203 40.000 0.00 0.11 0.00 3.91
4342 10238 6.017325 CGGACATATTATTGCGAACATGATG 58.983 40.000 0.00 0.00 0.00 3.07
4343 10239 5.390885 GCGGACATATTATTGCGAACATGAT 60.391 40.000 0.00 0.00 0.00 2.45
4344 10240 4.084066 GCGGACATATTATTGCGAACATGA 60.084 41.667 0.00 0.00 0.00 3.07
4345 10241 4.151070 GCGGACATATTATTGCGAACATG 58.849 43.478 0.00 0.00 0.00 3.21
4346 10242 4.404507 GCGGACATATTATTGCGAACAT 57.595 40.909 0.00 0.00 0.00 2.71
4347 10243 3.870723 GCGGACATATTATTGCGAACA 57.129 42.857 0.00 0.00 0.00 3.18
4351 10247 0.179225 GCCGCGGACATATTATTGCG 60.179 55.000 33.48 0.00 44.68 4.85
4352 10248 0.871722 TGCCGCGGACATATTATTGC 59.128 50.000 33.48 9.21 0.00 3.56
4353 10249 1.870402 TGTGCCGCGGACATATTATTG 59.130 47.619 33.48 0.00 0.00 1.90
4354 10250 2.248280 TGTGCCGCGGACATATTATT 57.752 45.000 33.48 0.00 0.00 1.40
4355 10251 2.248280 TTGTGCCGCGGACATATTAT 57.752 45.000 33.48 0.00 0.00 1.28
4356 10252 1.937223 CTTTGTGCCGCGGACATATTA 59.063 47.619 33.48 12.11 0.00 0.98
4357 10253 0.732571 CTTTGTGCCGCGGACATATT 59.267 50.000 33.48 0.00 0.00 1.28
4358 10254 0.392461 ACTTTGTGCCGCGGACATAT 60.392 50.000 33.48 14.64 0.00 1.78
4359 10255 0.604243 AACTTTGTGCCGCGGACATA 60.604 50.000 33.48 21.45 0.00 2.29
4360 10256 1.452145 AAACTTTGTGCCGCGGACAT 61.452 50.000 33.48 12.47 0.00 3.06
4361 10257 1.658686 AAAACTTTGTGCCGCGGACA 61.659 50.000 33.48 26.10 0.00 4.02
4362 10258 1.065109 AAAACTTTGTGCCGCGGAC 59.935 52.632 33.48 23.73 0.00 4.79
4363 10259 1.064946 CAAAACTTTGTGCCGCGGA 59.935 52.632 33.48 11.82 33.59 5.54
4364 10260 3.611697 CAAAACTTTGTGCCGCGG 58.388 55.556 24.05 24.05 33.59 6.46
4416 10312 8.391106 CGCTATTTAGAAGCACTTAATTTGTCT 58.609 33.333 0.00 0.00 40.08 3.41
4417 10313 8.175716 ACGCTATTTAGAAGCACTTAATTTGTC 58.824 33.333 0.00 0.00 40.08 3.18
4418 10314 8.040716 ACGCTATTTAGAAGCACTTAATTTGT 57.959 30.769 0.00 0.00 40.08 2.83
4419 10315 8.895932 AACGCTATTTAGAAGCACTTAATTTG 57.104 30.769 0.00 0.00 40.08 2.32
4420 10316 9.908152 AAAACGCTATTTAGAAGCACTTAATTT 57.092 25.926 0.00 0.00 40.08 1.82
4421 10317 9.341899 CAAAACGCTATTTAGAAGCACTTAATT 57.658 29.630 0.00 0.00 40.08 1.40
4422 10318 8.726988 TCAAAACGCTATTTAGAAGCACTTAAT 58.273 29.630 0.00 0.00 40.08 1.40
4423 10319 8.090250 TCAAAACGCTATTTAGAAGCACTTAA 57.910 30.769 0.00 0.00 40.08 1.85
4424 10320 7.148474 CCTCAAAACGCTATTTAGAAGCACTTA 60.148 37.037 0.00 0.00 40.08 2.24
4425 10321 6.348540 CCTCAAAACGCTATTTAGAAGCACTT 60.349 38.462 0.00 0.00 40.08 3.16
4426 10322 5.122396 CCTCAAAACGCTATTTAGAAGCACT 59.878 40.000 0.00 0.00 40.08 4.40
4427 10323 5.324697 CCTCAAAACGCTATTTAGAAGCAC 58.675 41.667 0.00 0.00 40.08 4.40
4428 10324 4.142687 GCCTCAAAACGCTATTTAGAAGCA 60.143 41.667 0.00 0.00 40.08 3.91
4429 10325 4.142687 TGCCTCAAAACGCTATTTAGAAGC 60.143 41.667 0.00 0.00 36.60 3.86
4430 10326 5.545658 TGCCTCAAAACGCTATTTAGAAG 57.454 39.130 0.00 0.00 0.00 2.85
4431 10327 7.618502 TTATGCCTCAAAACGCTATTTAGAA 57.381 32.000 0.00 0.00 0.00 2.10
4432 10328 7.801716 ATTATGCCTCAAAACGCTATTTAGA 57.198 32.000 0.00 0.00 0.00 2.10
4433 10329 8.856490 AAATTATGCCTCAAAACGCTATTTAG 57.144 30.769 0.00 0.00 0.00 1.85
4434 10330 9.646427 AAAAATTATGCCTCAAAACGCTATTTA 57.354 25.926 0.00 0.00 0.00 1.40
4435 10331 8.546597 AAAAATTATGCCTCAAAACGCTATTT 57.453 26.923 0.00 0.00 0.00 1.40
4457 10353 3.006247 GGCCTGTGCAAAAAGACAAAAA 58.994 40.909 0.00 0.00 40.13 1.94
4458 10354 2.027745 TGGCCTGTGCAAAAAGACAAAA 60.028 40.909 3.32 0.00 40.13 2.44
4459 10355 1.552337 TGGCCTGTGCAAAAAGACAAA 59.448 42.857 3.32 0.00 40.13 2.83
4460 10356 1.189752 TGGCCTGTGCAAAAAGACAA 58.810 45.000 3.32 0.00 40.13 3.18
4461 10357 1.412079 ATGGCCTGTGCAAAAAGACA 58.588 45.000 3.32 0.00 40.13 3.41
4462 10358 3.658757 TTATGGCCTGTGCAAAAAGAC 57.341 42.857 3.32 0.00 40.13 3.01
4463 10359 4.679373 TTTTATGGCCTGTGCAAAAAGA 57.321 36.364 3.32 0.00 40.13 2.52
4492 10388 7.222805 TGTGCGTGCATAAAGTTTAATGAAAAA 59.777 29.630 0.00 0.00 0.00 1.94
4493 10389 6.697455 TGTGCGTGCATAAAGTTTAATGAAAA 59.303 30.769 0.00 0.00 0.00 2.29
4494 10390 6.209361 TGTGCGTGCATAAAGTTTAATGAAA 58.791 32.000 0.00 0.00 0.00 2.69
4495 10391 5.763088 TGTGCGTGCATAAAGTTTAATGAA 58.237 33.333 0.00 0.00 0.00 2.57
4496 10392 5.363979 TGTGCGTGCATAAAGTTTAATGA 57.636 34.783 0.00 0.00 0.00 2.57
4497 10393 7.186128 TCTATGTGCGTGCATAAAGTTTAATG 58.814 34.615 0.00 0.88 31.76 1.90
4498 10394 7.315247 TCTATGTGCGTGCATAAAGTTTAAT 57.685 32.000 0.00 0.00 31.76 1.40
4499 10395 6.729391 TCTATGTGCGTGCATAAAGTTTAA 57.271 33.333 0.00 0.00 31.76 1.52
4500 10396 6.147985 TGTTCTATGTGCGTGCATAAAGTTTA 59.852 34.615 0.00 0.00 31.76 2.01
4501 10397 5.049060 TGTTCTATGTGCGTGCATAAAGTTT 60.049 36.000 0.00 0.00 31.76 2.66
4502 10398 4.454161 TGTTCTATGTGCGTGCATAAAGTT 59.546 37.500 0.00 0.00 31.76 2.66
4503 10399 4.000325 TGTTCTATGTGCGTGCATAAAGT 59.000 39.130 0.00 0.00 31.76 2.66
4504 10400 4.598406 TGTTCTATGTGCGTGCATAAAG 57.402 40.909 0.00 0.00 31.76 1.85
4505 10401 4.201901 CCATGTTCTATGTGCGTGCATAAA 60.202 41.667 0.00 0.00 31.76 1.40
4506 10402 3.312146 CCATGTTCTATGTGCGTGCATAA 59.688 43.478 0.00 0.00 31.76 1.90
4507 10403 2.871633 CCATGTTCTATGTGCGTGCATA 59.128 45.455 0.00 0.00 0.00 3.14
4508 10404 1.672363 CCATGTTCTATGTGCGTGCAT 59.328 47.619 0.00 0.12 0.00 3.96
4509 10405 1.085893 CCATGTTCTATGTGCGTGCA 58.914 50.000 0.00 0.00 0.00 4.57
4510 10406 1.328680 CTCCATGTTCTATGTGCGTGC 59.671 52.381 0.00 0.00 0.00 5.34
4511 10407 2.892374 TCTCCATGTTCTATGTGCGTG 58.108 47.619 0.00 0.00 0.00 5.34
4512 10408 3.118629 ACATCTCCATGTTCTATGTGCGT 60.119 43.478 0.00 0.00 40.66 5.24
4513 10409 3.461061 ACATCTCCATGTTCTATGTGCG 58.539 45.455 0.00 0.00 40.66 5.34
4514 10410 4.510711 CAGACATCTCCATGTTCTATGTGC 59.489 45.833 5.31 0.00 43.79 4.57
4515 10411 4.510711 GCAGACATCTCCATGTTCTATGTG 59.489 45.833 5.31 0.00 43.79 3.21
4516 10412 4.701765 GCAGACATCTCCATGTTCTATGT 58.298 43.478 0.00 0.00 43.79 2.29
4517 10413 3.739810 CGCAGACATCTCCATGTTCTATG 59.260 47.826 0.00 0.00 43.79 2.23
4518 10414 3.386078 ACGCAGACATCTCCATGTTCTAT 59.614 43.478 0.00 0.00 43.79 1.98
4519 10415 2.760650 ACGCAGACATCTCCATGTTCTA 59.239 45.455 0.00 0.00 43.79 2.10
4520 10416 1.552337 ACGCAGACATCTCCATGTTCT 59.448 47.619 0.00 0.00 43.79 3.01
4521 10417 1.662629 CACGCAGACATCTCCATGTTC 59.337 52.381 0.00 0.00 43.79 3.18
4522 10418 1.730501 CACGCAGACATCTCCATGTT 58.269 50.000 0.00 0.00 43.79 2.71
4523 10419 0.742281 GCACGCAGACATCTCCATGT 60.742 55.000 0.00 0.00 46.64 3.21
4524 10420 0.741927 TGCACGCAGACATCTCCATG 60.742 55.000 0.00 0.00 35.92 3.66
4525 10421 0.742281 GTGCACGCAGACATCTCCAT 60.742 55.000 0.00 0.00 0.00 3.41
4526 10422 1.374631 GTGCACGCAGACATCTCCA 60.375 57.895 0.00 0.00 0.00 3.86
4527 10423 2.103042 GGTGCACGCAGACATCTCC 61.103 63.158 11.45 0.00 0.00 3.71
4528 10424 0.671781 AAGGTGCACGCAGACATCTC 60.672 55.000 11.45 0.00 29.38 2.75
4529 10425 0.250467 AAAGGTGCACGCAGACATCT 60.250 50.000 11.45 0.00 30.71 2.90
4530 10426 0.593128 AAAAGGTGCACGCAGACATC 59.407 50.000 11.45 0.00 0.00 3.06
4531 10427 0.593128 GAAAAGGTGCACGCAGACAT 59.407 50.000 11.45 0.00 0.00 3.06
4532 10428 1.444119 GGAAAAGGTGCACGCAGACA 61.444 55.000 11.45 0.00 0.00 3.41
4533 10429 1.282875 GGAAAAGGTGCACGCAGAC 59.717 57.895 11.45 2.17 0.00 3.51
4534 10430 1.896660 GGGAAAAGGTGCACGCAGA 60.897 57.895 11.45 0.00 0.00 4.26
4535 10431 2.133742 CTGGGAAAAGGTGCACGCAG 62.134 60.000 11.45 6.59 37.09 5.18
4536 10432 2.124109 TGGGAAAAGGTGCACGCA 60.124 55.556 11.45 0.00 0.00 5.24
4537 10433 1.452145 TTCTGGGAAAAGGTGCACGC 61.452 55.000 11.45 3.85 0.00 5.34
4538 10434 1.247567 ATTCTGGGAAAAGGTGCACG 58.752 50.000 11.45 0.00 0.00 5.34
4539 10435 3.751479 AAATTCTGGGAAAAGGTGCAC 57.249 42.857 8.80 8.80 0.00 4.57
4540 10436 4.769345 AAAAATTCTGGGAAAAGGTGCA 57.231 36.364 0.00 0.00 0.00 4.57
4566 10462 9.583765 CCCATTTTGAAAAACACATTTTGAAAT 57.416 25.926 0.00 1.20 41.55 2.17
4567 10463 7.543520 GCCCATTTTGAAAAACACATTTTGAAA 59.456 29.630 0.00 0.00 40.69 2.69
4568 10464 7.031975 GCCCATTTTGAAAAACACATTTTGAA 58.968 30.769 0.00 0.00 41.27 2.69
4569 10465 6.376581 AGCCCATTTTGAAAAACACATTTTGA 59.623 30.769 0.00 0.00 41.27 2.69
4570 10466 6.562518 AGCCCATTTTGAAAAACACATTTTG 58.437 32.000 0.00 0.00 41.27 2.44
4571 10467 6.772360 AGCCCATTTTGAAAAACACATTTT 57.228 29.167 0.00 0.00 43.85 1.82
4572 10468 6.772360 AAGCCCATTTTGAAAAACACATTT 57.228 29.167 0.00 0.00 0.00 2.32
4573 10469 9.737844 ATATAAGCCCATTTTGAAAAACACATT 57.262 25.926 0.00 0.00 0.00 2.71
4574 10470 9.165035 CATATAAGCCCATTTTGAAAAACACAT 57.835 29.630 0.00 0.00 0.00 3.21
4575 10471 8.153550 ACATATAAGCCCATTTTGAAAAACACA 58.846 29.630 0.00 0.00 0.00 3.72
4576 10472 8.546597 ACATATAAGCCCATTTTGAAAAACAC 57.453 30.769 0.00 0.00 0.00 3.32
4580 10476 9.206690 TGGATACATATAAGCCCATTTTGAAAA 57.793 29.630 0.00 0.00 46.17 2.29
4581 10477 8.774546 TGGATACATATAAGCCCATTTTGAAA 57.225 30.769 0.00 0.00 46.17 2.69
4600 10496 6.429385 GGAAGTGAATGGATGAATCTGGATAC 59.571 42.308 0.00 0.00 0.00 2.24
4601 10497 6.466326 GGGAAGTGAATGGATGAATCTGGATA 60.466 42.308 0.00 0.00 0.00 2.59
4602 10498 5.383476 GGAAGTGAATGGATGAATCTGGAT 58.617 41.667 0.00 0.00 0.00 3.41
4603 10499 4.385643 GGGAAGTGAATGGATGAATCTGGA 60.386 45.833 0.00 0.00 0.00 3.86
4604 10500 3.887716 GGGAAGTGAATGGATGAATCTGG 59.112 47.826 0.00 0.00 0.00 3.86
4605 10501 4.529897 TGGGAAGTGAATGGATGAATCTG 58.470 43.478 0.00 0.00 0.00 2.90
4606 10502 4.868172 TGGGAAGTGAATGGATGAATCT 57.132 40.909 0.00 0.00 0.00 2.40
4607 10503 4.280174 CCATGGGAAGTGAATGGATGAATC 59.720 45.833 2.85 0.00 43.00 2.52
4608 10504 4.220724 CCATGGGAAGTGAATGGATGAAT 58.779 43.478 2.85 0.00 43.00 2.57
4609 10505 3.634504 CCATGGGAAGTGAATGGATGAA 58.365 45.455 2.85 0.00 43.00 2.57
4610 10506 2.687614 GCCATGGGAAGTGAATGGATGA 60.688 50.000 15.13 0.00 43.00 2.92
4611 10507 1.684983 GCCATGGGAAGTGAATGGATG 59.315 52.381 15.13 0.00 43.00 3.51
4612 10508 1.288633 TGCCATGGGAAGTGAATGGAT 59.711 47.619 15.13 0.00 43.00 3.41
4613 10509 0.703488 TGCCATGGGAAGTGAATGGA 59.297 50.000 15.13 0.00 43.00 3.41
4614 10510 1.559368 TTGCCATGGGAAGTGAATGG 58.441 50.000 15.64 0.00 43.18 3.16
4615 10511 2.159014 CCATTGCCATGGGAAGTGAATG 60.159 50.000 23.82 15.88 45.99 2.67
4616 10512 2.112998 CCATTGCCATGGGAAGTGAAT 58.887 47.619 23.82 3.92 45.99 2.57
4617 10513 1.559368 CCATTGCCATGGGAAGTGAA 58.441 50.000 23.82 0.27 45.99 3.18
4618 10514 3.286404 CCATTGCCATGGGAAGTGA 57.714 52.632 23.82 0.70 45.99 3.41
4626 10522 1.766494 TCTTAGCCACCATTGCCATG 58.234 50.000 0.00 0.00 0.00 3.66
4627 10523 2.530460 TTCTTAGCCACCATTGCCAT 57.470 45.000 0.00 0.00 0.00 4.40
4628 10524 2.101783 CATTCTTAGCCACCATTGCCA 58.898 47.619 0.00 0.00 0.00 4.92
4629 10525 2.378038 TCATTCTTAGCCACCATTGCC 58.622 47.619 0.00 0.00 0.00 4.52
4630 10526 3.797865 GCATCATTCTTAGCCACCATTGC 60.798 47.826 0.00 0.00 0.00 3.56
4631 10527 3.635373 AGCATCATTCTTAGCCACCATTG 59.365 43.478 0.00 0.00 0.00 2.82
4632 10528 3.907221 AGCATCATTCTTAGCCACCATT 58.093 40.909 0.00 0.00 0.00 3.16
4633 10529 3.589951 AGCATCATTCTTAGCCACCAT 57.410 42.857 0.00 0.00 0.00 3.55
4634 10530 3.370840 AAGCATCATTCTTAGCCACCA 57.629 42.857 0.00 0.00 0.00 4.17
4635 10531 3.067320 GGAAAGCATCATTCTTAGCCACC 59.933 47.826 0.00 0.00 0.00 4.61
4636 10532 3.067320 GGGAAAGCATCATTCTTAGCCAC 59.933 47.826 0.00 0.00 0.00 5.01
4655 10551 0.471211 AGTTGGACCAAGACTCGGGA 60.471 55.000 7.31 0.00 0.00 5.14
4670 10566 1.148157 CTCTATGCCGCCACGAGTTG 61.148 60.000 0.00 0.00 0.00 3.16
4698 10955 4.693566 CCATAAAAAGTAGCGACCAGACAA 59.306 41.667 0.00 0.00 0.00 3.18
4700 10957 4.501071 TCCATAAAAAGTAGCGACCAGAC 58.499 43.478 0.00 0.00 0.00 3.51
4701 10958 4.755411 CTCCATAAAAAGTAGCGACCAGA 58.245 43.478 0.00 0.00 0.00 3.86
4702 10959 3.309954 GCTCCATAAAAAGTAGCGACCAG 59.690 47.826 0.00 0.00 0.00 4.00
4754 11012 8.398878 AGACTTATATTTAGGAACGGAGAGAG 57.601 38.462 0.00 0.00 0.00 3.20
4756 11014 9.819267 AAAAGACTTATATTTAGGAACGGAGAG 57.181 33.333 0.00 0.00 0.00 3.20
4775 11033 8.951243 GTCCATATTTGAAGCTCTAAAAAGACT 58.049 33.333 0.00 0.00 0.00 3.24
4777 11035 8.862325 TGTCCATATTTGAAGCTCTAAAAAGA 57.138 30.769 0.00 0.00 0.00 2.52
4778 11036 9.346725 GTTGTCCATATTTGAAGCTCTAAAAAG 57.653 33.333 0.00 0.00 0.00 2.27
4780 11038 8.402798 TGTTGTCCATATTTGAAGCTCTAAAA 57.597 30.769 0.00 0.00 0.00 1.52
4781 11039 7.994425 TGTTGTCCATATTTGAAGCTCTAAA 57.006 32.000 0.00 0.00 0.00 1.85
4783 11041 7.011389 CGAATGTTGTCCATATTTGAAGCTCTA 59.989 37.037 0.00 0.00 31.97 2.43
4784 11042 6.183360 CGAATGTTGTCCATATTTGAAGCTCT 60.183 38.462 0.00 0.00 31.97 4.09
4786 11044 5.163622 CCGAATGTTGTCCATATTTGAAGCT 60.164 40.000 0.00 0.00 31.97 3.74
4788 11046 6.435430 TCCGAATGTTGTCCATATTTGAAG 57.565 37.500 0.00 0.00 31.97 3.02
4789 11047 7.403312 AATCCGAATGTTGTCCATATTTGAA 57.597 32.000 0.00 0.00 31.97 2.69
4790 11048 8.512966 TTAATCCGAATGTTGTCCATATTTGA 57.487 30.769 0.00 0.00 31.97 2.69
4791 11049 9.579768 TTTTAATCCGAATGTTGTCCATATTTG 57.420 29.630 0.00 0.00 31.97 2.32
4793 11051 9.748708 CATTTTAATCCGAATGTTGTCCATATT 57.251 29.630 0.00 0.00 31.97 1.28
4796 11054 7.122650 ACTCATTTTAATCCGAATGTTGTCCAT 59.877 33.333 0.00 0.00 35.35 3.41
4797 11055 6.432783 ACTCATTTTAATCCGAATGTTGTCCA 59.567 34.615 0.00 0.00 35.35 4.02
4799 11057 7.526608 TCACTCATTTTAATCCGAATGTTGTC 58.473 34.615 0.00 0.00 35.35 3.18
4800 11058 7.447374 TCACTCATTTTAATCCGAATGTTGT 57.553 32.000 0.00 0.00 35.35 3.32
4801 11059 8.915871 ATTCACTCATTTTAATCCGAATGTTG 57.084 30.769 0.00 0.00 35.35 3.33
4802 11060 9.927668 AAATTCACTCATTTTAATCCGAATGTT 57.072 25.926 0.00 0.00 35.35 2.71
4806 11064 9.834628 GTGTAAATTCACTCATTTTAATCCGAA 57.165 29.630 0.00 0.00 35.68 4.30
4807 11065 9.226606 AGTGTAAATTCACTCATTTTAATCCGA 57.773 29.630 0.00 0.00 44.07 4.55
4874 11132 9.755122 ACTAAATACAAGCCCTTTTAGAGATTT 57.245 29.630 7.95 0.00 35.94 2.17
4877 11135 9.662947 GTTACTAAATACAAGCCCTTTTAGAGA 57.337 33.333 7.95 0.00 35.94 3.10
4878 11136 8.601476 CGTTACTAAATACAAGCCCTTTTAGAG 58.399 37.037 7.95 0.00 35.94 2.43
4879 11137 7.550196 CCGTTACTAAATACAAGCCCTTTTAGA 59.450 37.037 7.95 0.00 35.94 2.10
4880 11138 7.550196 TCCGTTACTAAATACAAGCCCTTTTAG 59.450 37.037 0.00 0.00 37.56 1.85
4881 11139 7.393216 TCCGTTACTAAATACAAGCCCTTTTA 58.607 34.615 0.00 0.00 0.00 1.52
4882 11140 6.240145 TCCGTTACTAAATACAAGCCCTTTT 58.760 36.000 0.00 0.00 0.00 2.27
4883 11141 5.807909 TCCGTTACTAAATACAAGCCCTTT 58.192 37.500 0.00 0.00 0.00 3.11
4884 11142 5.425196 TCCGTTACTAAATACAAGCCCTT 57.575 39.130 0.00 0.00 0.00 3.95
4885 11143 4.141779 CCTCCGTTACTAAATACAAGCCCT 60.142 45.833 0.00 0.00 0.00 5.19
4886 11144 4.124970 CCTCCGTTACTAAATACAAGCCC 58.875 47.826 0.00 0.00 0.00 5.19
4887 11145 4.124970 CCCTCCGTTACTAAATACAAGCC 58.875 47.826 0.00 0.00 0.00 4.35
4888 11146 5.014808 TCCCTCCGTTACTAAATACAAGC 57.985 43.478 0.00 0.00 0.00 4.01
4889 11147 6.218108 ACTCCCTCCGTTACTAAATACAAG 57.782 41.667 0.00 0.00 0.00 3.16
4890 11148 6.891908 AGTACTCCCTCCGTTACTAAATACAA 59.108 38.462 0.00 0.00 0.00 2.41
4891 11149 6.426587 AGTACTCCCTCCGTTACTAAATACA 58.573 40.000 0.00 0.00 0.00 2.29
4892 11150 6.016693 GGAGTACTCCCTCCGTTACTAAATAC 60.017 46.154 28.87 0.00 43.94 1.89
4893 11151 6.064717 GGAGTACTCCCTCCGTTACTAAATA 58.935 44.000 28.87 0.00 43.94 1.40
4894 11152 4.892345 GGAGTACTCCCTCCGTTACTAAAT 59.108 45.833 28.87 0.00 43.94 1.40
4895 11153 4.273318 GGAGTACTCCCTCCGTTACTAAA 58.727 47.826 28.87 0.00 43.94 1.85
4896 11154 3.891049 GGAGTACTCCCTCCGTTACTAA 58.109 50.000 28.87 0.00 43.94 2.24
4897 11155 3.567478 GGAGTACTCCCTCCGTTACTA 57.433 52.381 28.87 0.00 43.94 1.82
4898 11156 2.433662 GGAGTACTCCCTCCGTTACT 57.566 55.000 28.87 0.00 43.94 2.24
4909 11167 1.172175 ACCGGACGAAAGGAGTACTC 58.828 55.000 14.87 14.87 0.00 2.59
4910 11168 2.496899 TACCGGACGAAAGGAGTACT 57.503 50.000 9.46 0.00 0.00 2.73
4911 11169 3.790152 AATACCGGACGAAAGGAGTAC 57.210 47.619 9.46 0.00 0.00 2.73
4912 11170 4.526970 AGTAATACCGGACGAAAGGAGTA 58.473 43.478 9.46 0.00 0.00 2.59
4913 11171 3.359950 AGTAATACCGGACGAAAGGAGT 58.640 45.455 9.46 0.00 0.00 3.85
4914 11172 4.110482 CAAGTAATACCGGACGAAAGGAG 58.890 47.826 9.46 0.00 0.00 3.69
4915 11173 3.511146 ACAAGTAATACCGGACGAAAGGA 59.489 43.478 9.46 0.00 0.00 3.36
4916 11174 3.853475 ACAAGTAATACCGGACGAAAGG 58.147 45.455 9.46 0.00 0.00 3.11
4917 11175 3.545078 CGACAAGTAATACCGGACGAAAG 59.455 47.826 9.46 0.00 0.00 2.62
4918 11176 3.500982 CGACAAGTAATACCGGACGAAA 58.499 45.455 9.46 0.00 0.00 3.46
4919 11177 2.731968 GCGACAAGTAATACCGGACGAA 60.732 50.000 9.46 0.00 0.00 3.85
4920 11178 1.202177 GCGACAAGTAATACCGGACGA 60.202 52.381 9.46 0.00 0.00 4.20
4921 11179 1.194495 GCGACAAGTAATACCGGACG 58.806 55.000 9.46 0.00 0.00 4.79
4922 11180 1.194495 CGCGACAAGTAATACCGGAC 58.806 55.000 9.46 0.00 0.00 4.79
4923 11181 1.093972 TCGCGACAAGTAATACCGGA 58.906 50.000 9.46 0.00 0.00 5.14
4924 11182 1.912001 TTCGCGACAAGTAATACCGG 58.088 50.000 9.15 0.00 0.00 5.28
4925 11183 3.976468 TTTTCGCGACAAGTAATACCG 57.024 42.857 9.15 0.00 0.00 4.02
4926 11184 6.817270 TCTATTTTCGCGACAAGTAATACC 57.183 37.500 9.15 0.00 0.00 2.73
4927 11185 7.838498 ACATCTATTTTCGCGACAAGTAATAC 58.162 34.615 9.15 0.00 0.00 1.89
4928 11186 7.997107 ACATCTATTTTCGCGACAAGTAATA 57.003 32.000 9.15 7.38 0.00 0.98
4929 11187 6.903883 ACATCTATTTTCGCGACAAGTAAT 57.096 33.333 9.15 6.57 0.00 1.89
4930 11188 7.919091 AGATACATCTATTTTCGCGACAAGTAA 59.081 33.333 9.15 0.00 34.85 2.24
4931 11189 7.423199 AGATACATCTATTTTCGCGACAAGTA 58.577 34.615 9.15 7.41 34.85 2.24
4932 11190 6.273825 AGATACATCTATTTTCGCGACAAGT 58.726 36.000 9.15 5.13 34.85 3.16
4933 11191 6.755461 AGATACATCTATTTTCGCGACAAG 57.245 37.500 9.15 3.90 34.85 3.16
4934 11192 7.166970 GTGTAGATACATCTATTTTCGCGACAA 59.833 37.037 9.15 9.93 41.09 3.18
4935 11193 6.635641 GTGTAGATACATCTATTTTCGCGACA 59.364 38.462 9.15 0.00 41.09 4.35
4936 11194 6.635641 TGTGTAGATACATCTATTTTCGCGAC 59.364 38.462 9.15 0.00 41.09 5.19
4937 11195 6.731164 TGTGTAGATACATCTATTTTCGCGA 58.269 36.000 3.71 3.71 41.09 5.87
4938 11196 6.986424 TGTGTAGATACATCTATTTTCGCG 57.014 37.500 0.00 0.00 41.09 5.87


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.