Multiple sequence alignment - TraesCS6A01G047400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G047400 chr6A 100.000 3162 0 0 1 3162 23964174 23961013 0.000000e+00 5840.0
1 TraesCS6A01G047400 chr6A 85.077 1300 151 20 889 2160 24031545 24030261 0.000000e+00 1286.0
2 TraesCS6A01G047400 chr6A 82.554 1347 154 44 891 2160 24048505 24049847 0.000000e+00 1110.0
3 TraesCS6A01G047400 chr6A 82.135 1321 179 26 892 2171 23952491 23951187 0.000000e+00 1079.0
4 TraesCS6A01G047400 chr6A 95.973 298 11 1 90 386 472393643 472393940 1.710000e-132 483.0
5 TraesCS6A01G047400 chr6A 95.098 306 13 2 89 393 207632543 207632847 6.130000e-132 481.0
6 TraesCS6A01G047400 chr6A 87.984 258 20 7 385 633 23952750 23952495 8.580000e-76 294.0
7 TraesCS6A01G047400 chr6A 97.059 34 0 1 2220 2252 23951056 23951023 4.410000e-04 56.5
8 TraesCS6A01G047400 chr6D 93.145 1809 101 13 385 2171 25853263 25851456 0.000000e+00 2632.0
9 TraesCS6A01G047400 chr6D 83.155 1306 167 25 891 2160 25827718 25826430 0.000000e+00 1144.0
10 TraesCS6A01G047400 chr6D 85.407 884 103 15 1300 2160 25879827 25878947 0.000000e+00 894.0
11 TraesCS6A01G047400 chr6D 81.314 685 86 24 891 1536 25914857 25915538 4.680000e-143 518.0
12 TraesCS6A01G047400 chr6D 88.716 257 22 4 386 637 25827968 25827714 1.100000e-79 307.0
13 TraesCS6A01G047400 chr6D 92.523 214 15 1 2821 3033 199209092 199208879 3.960000e-79 305.0
14 TraesCS6A01G047400 chr6D 82.155 297 42 8 2518 2813 25849982 25849696 8.760000e-61 244.0
15 TraesCS6A01G047400 chr6D 91.391 151 13 0 2247 2397 25851116 25850966 1.150000e-49 207.0
16 TraesCS6A01G047400 chr6D 95.876 97 2 1 1 97 25853357 25853263 4.220000e-34 156.0
17 TraesCS6A01G047400 chr6D 97.059 34 0 1 2220 2252 25826108 25826075 4.410000e-04 56.5
18 TraesCS6A01G047400 chr6D 78.095 105 11 8 2220 2316 25916310 25916410 4.410000e-04 56.5
19 TraesCS6A01G047400 chr6B 91.063 1298 77 14 889 2168 42231758 42230482 0.000000e+00 1718.0
20 TraesCS6A01G047400 chr6B 82.168 1301 180 27 891 2160 42392931 42394210 0.000000e+00 1070.0
21 TraesCS6A01G047400 chr6B 85.414 905 105 15 1281 2160 42318492 42317590 0.000000e+00 915.0
22 TraesCS6A01G047400 chr6B 82.732 637 94 11 1531 2160 42211440 42210813 1.280000e-153 553.0
23 TraesCS6A01G047400 chr6B 95.932 295 10 2 96 388 504367879 504368173 7.930000e-131 477.0
24 TraesCS6A01G047400 chr6B 87.696 382 40 6 891 1265 42212099 42211718 3.740000e-119 438.0
25 TraesCS6A01G047400 chr6B 92.405 237 18 0 1299 1535 42211707 42211471 3.910000e-89 339.0
26 TraesCS6A01G047400 chr6B 88.776 196 15 4 447 637 42212288 42212095 1.900000e-57 233.0
27 TraesCS6A01G047400 chr6B 93.706 143 8 1 496 637 42231897 42231755 2.470000e-51 213.0
28 TraesCS6A01G047400 chr6B 86.598 194 17 5 2223 2413 42216497 42216310 4.130000e-49 206.0
29 TraesCS6A01G047400 chr6B 83.744 203 26 4 2544 2741 42229613 42229413 5.390000e-43 185.0
30 TraesCS6A01G047400 chr6B 91.729 133 6 2 2220 2352 42230399 42230272 2.510000e-41 180.0
31 TraesCS6A01G047400 chr6B 92.174 115 8 1 385 498 42232260 42232146 9.080000e-36 161.0
32 TraesCS6A01G047400 chr6B 94.915 59 2 1 2220 2278 42227565 42227508 1.210000e-14 91.6
33 TraesCS6A01G047400 chr6B 100.000 28 0 0 2220 2247 42394505 42394532 6.000000e-03 52.8
34 TraesCS6A01G047400 chr4A 97.270 293 6 2 96 387 558704829 558704538 2.190000e-136 496.0
35 TraesCS6A01G047400 chr4A 87.410 278 27 8 625 897 704301338 704301612 2.370000e-81 313.0
36 TraesCS6A01G047400 chr4A 87.045 247 30 2 636 881 562182698 562182943 8.640000e-71 278.0
37 TraesCS6A01G047400 chr5A 97.260 292 7 1 96 386 303284477 303284186 7.880000e-136 494.0
38 TraesCS6A01G047400 chr5A 89.140 221 22 2 2816 3034 324114721 324114501 1.120000e-69 274.0
39 TraesCS6A01G047400 chr5A 85.660 265 31 6 634 893 637054413 637054151 4.020000e-69 272.0
40 TraesCS6A01G047400 chr3A 95.987 299 10 2 96 393 724026691 724026988 4.740000e-133 484.0
41 TraesCS6A01G047400 chr3A 95.638 298 11 2 94 390 733978014 733978310 7.930000e-131 477.0
42 TraesCS6A01G047400 chr7A 96.575 292 9 1 96 386 134024131 134023840 1.710000e-132 483.0
43 TraesCS6A01G047400 chr7A 78.776 523 89 15 1022 1537 670947227 670946720 6.540000e-87 331.0
44 TraesCS6A01G047400 chr1A 96.233 292 10 1 96 386 70115099 70115390 7.930000e-131 477.0
45 TraesCS6A01G047400 chr1A 85.375 253 30 5 651 897 550439411 550439662 4.050000e-64 255.0
46 TraesCS6A01G047400 chr1A 85.542 249 30 5 635 881 551589595 551589351 4.050000e-64 255.0
47 TraesCS6A01G047400 chrUn 88.803 259 25 4 625 881 313746269 313746525 6.580000e-82 315.0
48 TraesCS6A01G047400 chrUn 88.417 259 26 4 625 881 50553633 50553889 3.060000e-80 309.0
49 TraesCS6A01G047400 chr4D 92.237 219 16 1 2816 3033 200876421 200876203 3.060000e-80 309.0
50 TraesCS6A01G047400 chr4D 90.411 219 20 1 2816 3033 4359612 4359394 1.440000e-73 287.0
51 TraesCS6A01G047400 chr4D 89.545 220 20 3 2816 3034 441041826 441041609 3.110000e-70 276.0
52 TraesCS6A01G047400 chr4D 89.140 221 22 2 2816 3034 265058933 265059153 1.120000e-69 274.0
53 TraesCS6A01G047400 chr7D 90.411 219 20 1 2816 3033 469088844 469089062 1.440000e-73 287.0
54 TraesCS6A01G047400 chr3D 90.455 220 18 3 2816 3034 357569741 357569958 1.440000e-73 287.0
55 TraesCS6A01G047400 chr3D 87.149 249 27 5 634 881 608349263 608349507 8.640000e-71 278.0
56 TraesCS6A01G047400 chr2D 90.000 220 20 2 2816 3034 310212207 310211989 1.860000e-72 283.0
57 TraesCS6A01G047400 chr7B 81.991 211 38 0 1016 1226 643292751 643292541 2.510000e-41 180.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G047400 chr6A 23961013 23964174 3161 True 5840.000000 5840 100.000000 1 3162 1 chr6A.!!$R1 3161
1 TraesCS6A01G047400 chr6A 24030261 24031545 1284 True 1286.000000 1286 85.077000 889 2160 1 chr6A.!!$R2 1271
2 TraesCS6A01G047400 chr6A 24048505 24049847 1342 False 1110.000000 1110 82.554000 891 2160 1 chr6A.!!$F1 1269
3 TraesCS6A01G047400 chr6A 23951023 23952750 1727 True 476.500000 1079 89.059333 385 2252 3 chr6A.!!$R3 1867
4 TraesCS6A01G047400 chr6D 25878947 25879827 880 True 894.000000 894 85.407000 1300 2160 1 chr6D.!!$R1 860
5 TraesCS6A01G047400 chr6D 25849696 25853357 3661 True 809.750000 2632 90.641750 1 2813 4 chr6D.!!$R4 2812
6 TraesCS6A01G047400 chr6D 25826075 25827968 1893 True 502.500000 1144 89.643333 386 2252 3 chr6D.!!$R3 1866
7 TraesCS6A01G047400 chr6D 25914857 25916410 1553 False 287.250000 518 79.704500 891 2316 2 chr6D.!!$F1 1425
8 TraesCS6A01G047400 chr6B 42317590 42318492 902 True 915.000000 915 85.414000 1281 2160 1 chr6B.!!$R2 879
9 TraesCS6A01G047400 chr6B 42392931 42394532 1601 False 561.400000 1070 91.084000 891 2247 2 chr6B.!!$F2 1356
10 TraesCS6A01G047400 chr6B 42227508 42232260 4752 True 424.766667 1718 91.221833 385 2741 6 chr6B.!!$R4 2356
11 TraesCS6A01G047400 chr6B 42210813 42212288 1475 True 390.750000 553 87.902250 447 2160 4 chr6B.!!$R3 1713
12 TraesCS6A01G047400 chr7A 670946720 670947227 507 True 331.000000 331 78.776000 1022 1537 1 chr7A.!!$R2 515

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
369 370 0.038343 ACATTCCCGCAACAACATGC 60.038 50.0 0.0 0.0 42.94 4.06 F
1110 1386 0.687757 TCTATGCGAAGACCTGCCCT 60.688 55.0 0.0 0.0 0.00 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1515 1873 0.672889 TACGTACCAGAAACACGCCA 59.327 50.0 0.0 0.0 39.23 5.69 R
2493 6690 0.106769 TGCACCACACACATCAACCT 60.107 50.0 0.0 0.0 0.00 3.50 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 5.291971 AGTAGTTTCGATTGTTTACCACGT 58.708 37.500 0.00 0.00 0.00 4.49
48 49 6.446318 AGTAGTTTCGATTGTTTACCACGTA 58.554 36.000 0.00 0.00 0.00 3.57
74 75 4.871222 GTCACGTGACGACATAATTTCAG 58.129 43.478 31.03 0.00 35.12 3.02
96 97 6.268617 TCAGTTAGCTAGCTGAATATGGTCAT 59.731 38.462 30.97 0.00 39.97 3.06
97 98 6.589523 CAGTTAGCTAGCTGAATATGGTCATC 59.410 42.308 28.10 3.01 36.76 2.92
98 99 6.496565 AGTTAGCTAGCTGAATATGGTCATCT 59.503 38.462 27.68 5.37 0.00 2.90
99 100 5.822132 AGCTAGCTGAATATGGTCATCTT 57.178 39.130 18.57 0.00 0.00 2.40
100 101 5.792741 AGCTAGCTGAATATGGTCATCTTC 58.207 41.667 18.57 3.15 0.00 2.87
101 102 5.543405 AGCTAGCTGAATATGGTCATCTTCT 59.457 40.000 18.57 0.00 0.00 2.85
102 103 6.723515 AGCTAGCTGAATATGGTCATCTTCTA 59.276 38.462 18.57 0.00 0.00 2.10
103 104 7.399765 AGCTAGCTGAATATGGTCATCTTCTAT 59.600 37.037 18.57 0.00 0.00 1.98
104 105 8.690884 GCTAGCTGAATATGGTCATCTTCTATA 58.309 37.037 7.70 0.00 0.00 1.31
107 108 9.491406 AGCTGAATATGGTCATCTTCTATATCT 57.509 33.333 9.43 0.47 0.00 1.98
130 131 9.900112 ATCTAAATAACTAGTCCCCACTAAGAT 57.100 33.333 0.00 0.00 34.53 2.40
136 137 9.900112 ATAACTAGTCCCCACTAAGATATTTCT 57.100 33.333 0.00 0.00 34.53 2.52
137 138 7.842887 ACTAGTCCCCACTAAGATATTTCTC 57.157 40.000 0.00 0.00 34.53 2.87
138 139 7.597327 ACTAGTCCCCACTAAGATATTTCTCT 58.403 38.462 0.00 0.00 34.53 3.10
139 140 6.987403 AGTCCCCACTAAGATATTTCTCTC 57.013 41.667 0.00 0.00 0.00 3.20
140 141 6.444704 AGTCCCCACTAAGATATTTCTCTCA 58.555 40.000 0.00 0.00 0.00 3.27
141 142 6.903534 AGTCCCCACTAAGATATTTCTCTCAA 59.096 38.462 0.00 0.00 0.00 3.02
142 143 6.987404 GTCCCCACTAAGATATTTCTCTCAAC 59.013 42.308 0.00 0.00 0.00 3.18
143 144 6.672218 TCCCCACTAAGATATTTCTCTCAACA 59.328 38.462 0.00 0.00 0.00 3.33
144 145 7.348274 TCCCCACTAAGATATTTCTCTCAACAT 59.652 37.037 0.00 0.00 0.00 2.71
145 146 7.443575 CCCCACTAAGATATTTCTCTCAACATG 59.556 40.741 0.00 0.00 0.00 3.21
146 147 7.041508 CCCACTAAGATATTTCTCTCAACATGC 60.042 40.741 0.00 0.00 0.00 4.06
147 148 7.496920 CCACTAAGATATTTCTCTCAACATGCA 59.503 37.037 0.00 0.00 0.00 3.96
148 149 8.886719 CACTAAGATATTTCTCTCAACATGCAA 58.113 33.333 0.00 0.00 0.00 4.08
149 150 9.107177 ACTAAGATATTTCTCTCAACATGCAAG 57.893 33.333 0.00 0.00 0.00 4.01
150 151 6.374565 AGATATTTCTCTCAACATGCAAGC 57.625 37.500 0.00 0.00 0.00 4.01
151 152 5.884232 AGATATTTCTCTCAACATGCAAGCA 59.116 36.000 0.00 0.00 0.00 3.91
152 153 6.546403 AGATATTTCTCTCAACATGCAAGCAT 59.454 34.615 0.86 0.86 37.08 3.79
164 165 2.876581 CAAGCATGCCACCTCATCA 58.123 52.632 15.66 0.00 0.00 3.07
165 166 1.399714 CAAGCATGCCACCTCATCAT 58.600 50.000 15.66 0.00 0.00 2.45
166 167 1.754803 CAAGCATGCCACCTCATCATT 59.245 47.619 15.66 0.00 0.00 2.57
167 168 1.688772 AGCATGCCACCTCATCATTC 58.311 50.000 15.66 0.00 0.00 2.67
168 169 1.064240 AGCATGCCACCTCATCATTCA 60.064 47.619 15.66 0.00 0.00 2.57
169 170 1.752498 GCATGCCACCTCATCATTCAA 59.248 47.619 6.36 0.00 0.00 2.69
170 171 2.480759 GCATGCCACCTCATCATTCAAC 60.481 50.000 6.36 0.00 0.00 3.18
171 172 2.583024 TGCCACCTCATCATTCAACA 57.417 45.000 0.00 0.00 0.00 3.33
172 173 3.090210 TGCCACCTCATCATTCAACAT 57.910 42.857 0.00 0.00 0.00 2.71
173 174 2.756207 TGCCACCTCATCATTCAACATG 59.244 45.455 0.00 0.00 0.00 3.21
174 175 2.480759 GCCACCTCATCATTCAACATGC 60.481 50.000 0.00 0.00 0.00 4.06
175 176 2.756207 CCACCTCATCATTCAACATGCA 59.244 45.455 0.00 0.00 0.00 3.96
176 177 3.383505 CCACCTCATCATTCAACATGCAT 59.616 43.478 0.00 0.00 0.00 3.96
177 178 4.581409 CCACCTCATCATTCAACATGCATA 59.419 41.667 0.00 0.00 0.00 3.14
178 179 5.068067 CCACCTCATCATTCAACATGCATAA 59.932 40.000 0.00 0.00 0.00 1.90
179 180 6.206498 CACCTCATCATTCAACATGCATAAG 58.794 40.000 0.00 0.00 0.00 1.73
180 181 6.038936 CACCTCATCATTCAACATGCATAAGA 59.961 38.462 0.00 0.00 0.00 2.10
181 182 6.604396 ACCTCATCATTCAACATGCATAAGAA 59.396 34.615 0.00 4.45 0.00 2.52
182 183 7.123098 ACCTCATCATTCAACATGCATAAGAAA 59.877 33.333 0.00 0.00 0.00 2.52
183 184 7.977293 CCTCATCATTCAACATGCATAAGAAAA 59.023 33.333 0.00 0.00 0.00 2.29
184 185 8.920509 TCATCATTCAACATGCATAAGAAAAG 57.079 30.769 0.00 2.32 0.00 2.27
185 186 7.977293 TCATCATTCAACATGCATAAGAAAAGG 59.023 33.333 0.00 0.02 0.00 3.11
186 187 7.465353 TCATTCAACATGCATAAGAAAAGGA 57.535 32.000 0.00 1.91 0.00 3.36
187 188 7.315142 TCATTCAACATGCATAAGAAAAGGAC 58.685 34.615 0.00 0.00 0.00 3.85
188 189 5.643379 TCAACATGCATAAGAAAAGGACC 57.357 39.130 0.00 0.00 0.00 4.46
189 190 5.076182 TCAACATGCATAAGAAAAGGACCA 58.924 37.500 0.00 0.00 0.00 4.02
190 191 5.048083 TCAACATGCATAAGAAAAGGACCAC 60.048 40.000 0.00 0.00 0.00 4.16
191 192 3.763897 ACATGCATAAGAAAAGGACCACC 59.236 43.478 0.00 0.00 0.00 4.61
201 202 2.154139 AGGACCACCTCAACATGCA 58.846 52.632 0.00 0.00 44.13 3.96
202 203 0.478072 AGGACCACCTCAACATGCAA 59.522 50.000 0.00 0.00 44.13 4.08
203 204 0.598065 GGACCACCTCAACATGCAAC 59.402 55.000 0.00 0.00 0.00 4.17
204 205 1.609208 GACCACCTCAACATGCAACT 58.391 50.000 0.00 0.00 0.00 3.16
205 206 2.552155 GGACCACCTCAACATGCAACTA 60.552 50.000 0.00 0.00 0.00 2.24
206 207 3.347216 GACCACCTCAACATGCAACTAT 58.653 45.455 0.00 0.00 0.00 2.12
207 208 3.084039 ACCACCTCAACATGCAACTATG 58.916 45.455 0.00 0.00 0.00 2.23
228 229 9.772973 ACTATGCATATTAAAAATCCACTACGA 57.227 29.630 6.92 0.00 0.00 3.43
230 231 7.851387 TGCATATTAAAAATCCACTACGACA 57.149 32.000 0.00 0.00 0.00 4.35
231 232 8.445275 TGCATATTAAAAATCCACTACGACAT 57.555 30.769 0.00 0.00 0.00 3.06
232 233 8.341903 TGCATATTAAAAATCCACTACGACATG 58.658 33.333 0.00 0.00 0.00 3.21
233 234 7.323656 GCATATTAAAAATCCACTACGACATGC 59.676 37.037 0.00 0.00 0.00 4.06
234 235 6.751514 ATTAAAAATCCACTACGACATGCA 57.248 33.333 0.00 0.00 0.00 3.96
235 236 6.751514 TTAAAAATCCACTACGACATGCAT 57.248 33.333 0.00 0.00 0.00 3.96
236 237 4.621068 AAAATCCACTACGACATGCATG 57.379 40.909 25.09 25.09 0.00 4.06
237 238 1.586422 ATCCACTACGACATGCATGC 58.414 50.000 26.53 17.30 0.00 4.06
238 239 0.248843 TCCACTACGACATGCATGCA 59.751 50.000 26.53 25.04 0.00 3.96
239 240 1.134431 TCCACTACGACATGCATGCAT 60.134 47.619 27.46 27.46 37.08 3.96
252 253 6.612247 CATGCATGCATGTAAAATTCCATT 57.388 33.333 40.30 13.05 46.20 3.16
253 254 7.022055 CATGCATGCATGTAAAATTCCATTT 57.978 32.000 40.30 12.41 46.20 2.32
254 255 7.476667 CATGCATGCATGTAAAATTCCATTTT 58.523 30.769 40.30 12.04 46.20 1.82
255 256 7.450124 TGCATGCATGTAAAATTCCATTTTT 57.550 28.000 26.79 0.00 42.13 1.94
356 357 8.706492 TCTCATTGAAATATTGCAAACATTCC 57.294 30.769 12.95 0.00 0.00 3.01
357 358 7.765360 TCTCATTGAAATATTGCAAACATTCCC 59.235 33.333 12.95 3.44 0.00 3.97
358 359 6.534436 TCATTGAAATATTGCAAACATTCCCG 59.466 34.615 12.95 0.44 0.00 5.14
359 360 4.180057 TGAAATATTGCAAACATTCCCGC 58.820 39.130 1.71 0.00 0.00 6.13
360 361 3.883830 AATATTGCAAACATTCCCGCA 57.116 38.095 1.71 0.00 0.00 5.69
362 363 1.794512 ATTGCAAACATTCCCGCAAC 58.205 45.000 1.71 0.00 46.21 4.17
363 364 0.461548 TTGCAAACATTCCCGCAACA 59.538 45.000 0.00 0.00 39.32 3.33
364 365 0.461548 TGCAAACATTCCCGCAACAA 59.538 45.000 0.00 0.00 0.00 2.83
365 366 0.858583 GCAAACATTCCCGCAACAAC 59.141 50.000 0.00 0.00 0.00 3.32
366 367 1.804372 GCAAACATTCCCGCAACAACA 60.804 47.619 0.00 0.00 0.00 3.33
367 368 2.753296 CAAACATTCCCGCAACAACAT 58.247 42.857 0.00 0.00 0.00 2.71
368 369 2.437200 AACATTCCCGCAACAACATG 57.563 45.000 0.00 0.00 0.00 3.21
369 370 0.038343 ACATTCCCGCAACAACATGC 60.038 50.000 0.00 0.00 42.94 4.06
375 376 3.988525 GCAACAACATGCGGGGCA 61.989 61.111 0.00 0.00 44.86 5.36
570 827 5.530915 TGGAACTTGTCATACTTTTCCACAG 59.469 40.000 0.00 0.00 38.04 3.66
574 832 2.107378 TGTCATACTTTTCCACAGCCCA 59.893 45.455 0.00 0.00 0.00 5.36
610 872 7.112122 ACTTTTGACCATTCTACATGCATCTA 58.888 34.615 0.00 0.00 0.00 1.98
634 896 9.906660 CTAATGCAACCAAAAGAACAATACTAA 57.093 29.630 0.00 0.00 0.00 2.24
639 901 9.908152 GCAACCAAAAGAACAATACTAATACTT 57.092 29.630 0.00 0.00 0.00 2.24
662 924 8.837389 ACTTTCTTCGTTTCTTTTTAGTATGCT 58.163 29.630 0.00 0.00 0.00 3.79
952 1219 1.209019 CCACTGAGCTAGCAATCCTGT 59.791 52.381 18.83 9.81 0.00 4.00
1048 1324 3.715854 CATTGCTTGCTTGCTCTCC 57.284 52.632 3.47 0.00 0.00 3.71
1110 1386 0.687757 TCTATGCGAAGACCTGCCCT 60.688 55.000 0.00 0.00 0.00 5.19
1112 1388 1.000283 CTATGCGAAGACCTGCCCTAG 60.000 57.143 0.00 0.00 0.00 3.02
1123 1399 2.592308 GCCCTAGGCTGGAACTGG 59.408 66.667 2.05 0.00 46.69 4.00
1164 1440 4.933064 GCACTCCTCGCCGATCGG 62.933 72.222 30.03 30.03 39.05 4.18
1417 1775 0.964860 TCCGAACGGGAATACGGTGA 60.965 55.000 13.29 0.00 43.62 4.02
1585 2052 4.750598 TGACAACGTTTGAATTGATCCGTA 59.249 37.500 0.00 0.00 0.00 4.02
1586 2053 5.025986 ACAACGTTTGAATTGATCCGTAC 57.974 39.130 0.00 0.00 0.00 3.67
1588 2055 3.577667 ACGTTTGAATTGATCCGTACGA 58.422 40.909 18.76 3.10 32.68 3.43
1589 2056 3.365820 ACGTTTGAATTGATCCGTACGAC 59.634 43.478 18.76 8.40 32.68 4.34
1590 2057 3.365520 CGTTTGAATTGATCCGTACGACA 59.634 43.478 18.76 11.01 31.02 4.35
1942 2418 1.200483 CGCAGCTCGTATTCGACAAT 58.800 50.000 0.00 0.00 41.35 2.71
2004 2480 1.738099 CCGACCAGTTGCTCTTCGG 60.738 63.158 7.71 7.71 39.27 4.30
2102 2578 0.034616 GATCAAGATGGGGAGCCTCG 59.965 60.000 0.00 0.00 0.00 4.63
2149 2625 0.602638 TTAGACGCAACTGCAGGGTG 60.603 55.000 19.93 18.00 42.21 4.61
2171 2652 3.070159 GGTCAACAGCTAGCTGATCCATA 59.930 47.826 43.42 22.38 46.30 2.74
2173 2654 5.047021 GGTCAACAGCTAGCTGATCCATATA 60.047 44.000 43.42 20.11 46.30 0.86
2174 2655 6.351711 GGTCAACAGCTAGCTGATCCATATAT 60.352 42.308 43.42 20.41 46.30 0.86
2175 2656 7.147828 GGTCAACAGCTAGCTGATCCATATATA 60.148 40.741 43.42 17.47 46.30 0.86
2176 2657 8.420222 GTCAACAGCTAGCTGATCCATATATAT 58.580 37.037 43.42 19.20 46.30 0.86
2181 2662 8.303156 CAGCTAGCTGATCCATATATATACCAC 58.697 40.741 36.47 0.00 46.30 4.16
2182 2663 7.175816 AGCTAGCTGATCCATATATATACCACG 59.824 40.741 18.57 0.00 0.00 4.94
2185 2666 8.167605 AGCTGATCCATATATATACCACGTAC 57.832 38.462 0.00 0.00 0.00 3.67
2186 2667 7.999545 AGCTGATCCATATATATACCACGTACT 59.000 37.037 0.00 0.00 0.00 2.73
2187 2668 9.281371 GCTGATCCATATATATACCACGTACTA 57.719 37.037 0.00 0.00 0.00 1.82
2279 5896 1.264749 TGGGGTTCAGAGGTGATCCG 61.265 60.000 0.00 0.00 41.80 4.18
2320 5937 9.646427 GTAAGATACCTTCATCATGTAATCTCC 57.354 37.037 0.00 0.00 33.94 3.71
2330 5947 2.507407 TGTAATCTCCCAAGTTGCCC 57.493 50.000 0.00 0.00 0.00 5.36
2346 5963 7.298122 CAAGTTGCCCGTATATAAGCAAATAG 58.702 38.462 14.36 6.70 45.95 1.73
2351 5968 7.318141 TGCCCGTATATAAGCAAATAGTACTC 58.682 38.462 0.00 0.00 30.97 2.59
2405 6592 3.067461 TGCAACATTCAAGGGTTGTGTAC 59.933 43.478 0.00 0.00 44.70 2.90
2420 6607 2.431782 TGTGTACGGCCCCTAAACTATC 59.568 50.000 0.00 0.00 0.00 2.08
2433 6620 0.248907 AACTATCGACATCGTGCGGG 60.249 55.000 0.54 0.00 40.80 6.13
2434 6621 1.359117 CTATCGACATCGTGCGGGT 59.641 57.895 0.54 0.00 40.80 5.28
2435 6622 0.248907 CTATCGACATCGTGCGGGTT 60.249 55.000 0.54 0.00 40.80 4.11
2436 6623 0.173935 TATCGACATCGTGCGGGTTT 59.826 50.000 0.54 0.00 40.80 3.27
2437 6624 0.173935 ATCGACATCGTGCGGGTTTA 59.826 50.000 0.54 0.00 40.80 2.01
2438 6625 0.457166 TCGACATCGTGCGGGTTTAG 60.457 55.000 0.54 0.00 40.80 1.85
2449 6636 4.557097 CGTGCGGGTTTAGGTTGTAAAAAT 60.557 41.667 0.00 0.00 0.00 1.82
2460 6647 5.134661 AGGTTGTAAAAATTGTTCCTCCGA 58.865 37.500 0.00 0.00 0.00 4.55
2461 6648 5.009310 AGGTTGTAAAAATTGTTCCTCCGAC 59.991 40.000 0.00 0.00 0.00 4.79
2493 6690 2.418368 AGAGTTTTGTGTGTGGAGCA 57.582 45.000 0.00 0.00 0.00 4.26
2506 6703 0.473755 TGGAGCAGGTTGATGTGTGT 59.526 50.000 0.00 0.00 0.00 3.72
2507 6704 0.877071 GGAGCAGGTTGATGTGTGTG 59.123 55.000 0.00 0.00 0.00 3.82
2510 6707 0.311790 GCAGGTTGATGTGTGTGGTG 59.688 55.000 0.00 0.00 0.00 4.17
2523 6720 1.806542 GTGTGGTGCACATGTAAGAGG 59.193 52.381 20.43 0.00 46.32 3.69
2543 7030 0.467290 AGGTCAACGCATGTGGGTTT 60.467 50.000 11.65 0.00 46.98 3.27
2544 7031 1.202830 AGGTCAACGCATGTGGGTTTA 60.203 47.619 11.65 3.10 46.98 2.01
2545 7032 1.068816 GGTCAACGCATGTGGGTTTAC 60.069 52.381 11.65 13.71 46.98 2.01
2546 7033 1.604755 GTCAACGCATGTGGGTTTACA 59.395 47.619 17.17 3.35 46.98 2.41
2550 7037 1.071699 ACGCATGTGGGTTTACACTCT 59.928 47.619 11.65 0.00 41.84 3.24
2565 7052 3.131396 ACACTCTTGATTGGTGTTCGTC 58.869 45.455 0.00 0.00 40.68 4.20
2574 7061 1.375523 GGTGTTCGTCGCCTCCATT 60.376 57.895 5.90 0.00 42.91 3.16
2580 7067 0.385751 TCGTCGCCTCCATTGATCTC 59.614 55.000 0.00 0.00 0.00 2.75
2583 7070 1.410517 GTCGCCTCCATTGATCTCTGA 59.589 52.381 0.00 0.00 0.00 3.27
2587 7074 3.881688 CGCCTCCATTGATCTCTGAAATT 59.118 43.478 0.00 0.00 0.00 1.82
2591 7078 5.302059 CCTCCATTGATCTCTGAAATTGCAT 59.698 40.000 0.00 0.00 0.00 3.96
2607 7094 0.179156 GCATCATGTGGTTCAAGCGG 60.179 55.000 0.00 0.00 0.00 5.52
2648 7135 1.419374 CGTTCTTCCTCTTGTGGACG 58.581 55.000 0.00 0.00 35.58 4.79
2659 7146 1.204704 CTTGTGGACGAGCAGACCATA 59.795 52.381 6.67 2.16 45.69 2.74
2665 7152 3.704566 TGGACGAGCAGACCATATACTTT 59.295 43.478 0.00 0.00 39.66 2.66
2667 7154 4.441634 GGACGAGCAGACCATATACTTTGT 60.442 45.833 0.00 0.00 34.74 2.83
2669 7156 3.731216 CGAGCAGACCATATACTTTGTCG 59.269 47.826 0.00 0.00 33.04 4.35
2670 7157 4.683832 GAGCAGACCATATACTTTGTCGT 58.316 43.478 0.00 0.00 33.04 4.34
2674 7161 5.915758 GCAGACCATATACTTTGTCGTCTAG 59.084 44.000 0.00 0.00 33.04 2.43
2680 7167 1.183549 ACTTTGTCGTCTAGGGCGAT 58.816 50.000 12.08 0.00 40.59 4.58
2684 7171 4.142004 ACTTTGTCGTCTAGGGCGATAAAT 60.142 41.667 21.87 14.40 44.10 1.40
2689 7176 2.689646 GTCTAGGGCGATAAATGGAGC 58.310 52.381 0.00 0.00 0.00 4.70
2691 7178 2.906389 TCTAGGGCGATAAATGGAGCAT 59.094 45.455 0.00 0.00 0.00 3.79
2697 7184 2.349817 GCGATAAATGGAGCATTGGTCG 60.350 50.000 9.58 1.40 40.77 4.79
2700 7187 1.656818 AAATGGAGCATTGGTCGGCG 61.657 55.000 0.00 0.00 34.04 6.46
2701 7188 2.819984 AATGGAGCATTGGTCGGCGT 62.820 55.000 6.85 0.00 32.39 5.68
2702 7189 3.499737 GGAGCATTGGTCGGCGTG 61.500 66.667 6.85 0.00 34.54 5.34
2708 7195 4.858680 TTGGTCGGCGTGTTGGCA 62.859 61.111 6.85 0.00 45.16 4.92
2724 7211 2.584418 CAGGCTCTCCGTGATGCG 60.584 66.667 0.00 0.00 40.95 4.73
2744 7231 0.108992 TGTCTGGCCGCGTAGTAAAG 60.109 55.000 4.92 0.00 0.00 1.85
2745 7232 0.804933 GTCTGGCCGCGTAGTAAAGG 60.805 60.000 4.92 0.00 0.00 3.11
2750 7237 0.179129 GCCGCGTAGTAAAGGCTACA 60.179 55.000 4.92 0.00 45.67 2.74
2758 7245 5.279384 CGTAGTAAAGGCTACACATAGTGG 58.721 45.833 1.93 0.00 40.87 4.00
2759 7246 4.755266 AGTAAAGGCTACACATAGTGGG 57.245 45.455 1.93 0.00 37.94 4.61
2760 7247 3.454812 AGTAAAGGCTACACATAGTGGGG 59.545 47.826 1.93 0.00 37.94 4.96
2765 7252 1.139058 GCTACACATAGTGGGGAGTGG 59.861 57.143 1.93 0.00 37.94 4.00
2772 7259 6.760392 ACACATAGTGGGGAGTGGTAACATT 61.760 44.000 1.93 0.00 43.78 2.71
2820 7307 8.668510 AATGATATGTCAAGTGATGTTACTCC 57.331 34.615 0.00 0.00 38.01 3.85
2821 7308 6.582636 TGATATGTCAAGTGATGTTACTCCC 58.417 40.000 0.00 0.00 0.00 4.30
2822 7309 6.384015 TGATATGTCAAGTGATGTTACTCCCT 59.616 38.462 0.00 0.00 0.00 4.20
2823 7310 4.537135 TGTCAAGTGATGTTACTCCCTC 57.463 45.455 0.00 0.00 0.00 4.30
2824 7311 4.160329 TGTCAAGTGATGTTACTCCCTCT 58.840 43.478 0.00 0.00 0.00 3.69
2825 7312 5.330233 TGTCAAGTGATGTTACTCCCTCTA 58.670 41.667 0.00 0.00 0.00 2.43
2826 7313 5.958380 TGTCAAGTGATGTTACTCCCTCTAT 59.042 40.000 0.00 0.00 0.00 1.98
2827 7314 6.096987 TGTCAAGTGATGTTACTCCCTCTATC 59.903 42.308 0.00 0.00 0.00 2.08
2828 7315 6.322712 GTCAAGTGATGTTACTCCCTCTATCT 59.677 42.308 0.00 0.00 0.00 1.98
2829 7316 6.547880 TCAAGTGATGTTACTCCCTCTATCTC 59.452 42.308 0.00 0.00 0.00 2.75
2830 7317 6.019656 AGTGATGTTACTCCCTCTATCTCA 57.980 41.667 0.00 0.00 0.00 3.27
2831 7318 6.068010 AGTGATGTTACTCCCTCTATCTCAG 58.932 44.000 0.00 0.00 0.00 3.35
2832 7319 5.830991 GTGATGTTACTCCCTCTATCTCAGT 59.169 44.000 0.00 0.00 0.00 3.41
2833 7320 6.322712 GTGATGTTACTCCCTCTATCTCAGTT 59.677 42.308 0.00 0.00 0.00 3.16
2834 7321 6.897966 TGATGTTACTCCCTCTATCTCAGTTT 59.102 38.462 0.00 0.00 0.00 2.66
2835 7322 7.400339 TGATGTTACTCCCTCTATCTCAGTTTT 59.600 37.037 0.00 0.00 0.00 2.43
2836 7323 7.171630 TGTTACTCCCTCTATCTCAGTTTTC 57.828 40.000 0.00 0.00 0.00 2.29
2837 7324 6.724441 TGTTACTCCCTCTATCTCAGTTTTCA 59.276 38.462 0.00 0.00 0.00 2.69
2838 7325 7.234782 TGTTACTCCCTCTATCTCAGTTTTCAA 59.765 37.037 0.00 0.00 0.00 2.69
2839 7326 6.293004 ACTCCCTCTATCTCAGTTTTCAAG 57.707 41.667 0.00 0.00 0.00 3.02
2840 7327 5.782845 ACTCCCTCTATCTCAGTTTTCAAGT 59.217 40.000 0.00 0.00 0.00 3.16
2841 7328 6.071051 ACTCCCTCTATCTCAGTTTTCAAGTC 60.071 42.308 0.00 0.00 0.00 3.01
2842 7329 6.019748 TCCCTCTATCTCAGTTTTCAAGTCT 58.980 40.000 0.00 0.00 0.00 3.24
2843 7330 6.498651 TCCCTCTATCTCAGTTTTCAAGTCTT 59.501 38.462 0.00 0.00 0.00 3.01
2844 7331 6.593382 CCCTCTATCTCAGTTTTCAAGTCTTG 59.407 42.308 6.21 6.21 0.00 3.02
2845 7332 6.091986 CCTCTATCTCAGTTTTCAAGTCTTGC 59.908 42.308 7.78 0.00 0.00 4.01
2846 7333 6.524734 TCTATCTCAGTTTTCAAGTCTTGCA 58.475 36.000 7.78 0.00 0.00 4.08
2847 7334 4.882671 TCTCAGTTTTCAAGTCTTGCAC 57.117 40.909 7.78 4.76 0.00 4.57
2848 7335 3.309682 TCTCAGTTTTCAAGTCTTGCACG 59.690 43.478 7.78 0.00 0.00 5.34
2849 7336 3.006940 TCAGTTTTCAAGTCTTGCACGT 58.993 40.909 7.78 0.00 0.00 4.49
2850 7337 3.100817 CAGTTTTCAAGTCTTGCACGTG 58.899 45.455 12.28 12.28 35.92 4.49
2851 7338 2.747446 AGTTTTCAAGTCTTGCACGTGT 59.253 40.909 18.38 0.00 36.03 4.49
2852 7339 3.936453 AGTTTTCAAGTCTTGCACGTGTA 59.064 39.130 18.38 10.46 36.03 2.90
2853 7340 3.936902 TTTCAAGTCTTGCACGTGTAC 57.063 42.857 18.38 10.47 36.03 2.90
2854 7341 2.882927 TCAAGTCTTGCACGTGTACT 57.117 45.000 18.38 12.53 36.03 2.73
2855 7342 3.994204 TCAAGTCTTGCACGTGTACTA 57.006 42.857 18.38 0.00 36.03 1.82
2856 7343 3.897325 TCAAGTCTTGCACGTGTACTAG 58.103 45.455 18.38 8.23 36.03 2.57
2857 7344 3.566742 TCAAGTCTTGCACGTGTACTAGA 59.433 43.478 18.38 10.64 36.03 2.43
2858 7345 4.217767 TCAAGTCTTGCACGTGTACTAGAT 59.782 41.667 18.38 0.00 36.03 1.98
2859 7346 4.358494 AGTCTTGCACGTGTACTAGATC 57.642 45.455 18.38 8.24 0.00 2.75
2860 7347 3.099362 GTCTTGCACGTGTACTAGATCG 58.901 50.000 18.38 0.00 0.00 3.69
2861 7348 1.846782 CTTGCACGTGTACTAGATCGC 59.153 52.381 18.38 0.00 0.00 4.58
2862 7349 1.092348 TGCACGTGTACTAGATCGCT 58.908 50.000 18.38 0.00 0.00 4.93
2863 7350 2.282407 TGCACGTGTACTAGATCGCTA 58.718 47.619 18.38 0.00 0.00 4.26
2864 7351 2.679336 TGCACGTGTACTAGATCGCTAA 59.321 45.455 18.38 0.00 0.00 3.09
2865 7352 3.314357 TGCACGTGTACTAGATCGCTAAT 59.686 43.478 18.38 0.00 0.00 1.73
2866 7353 4.201980 TGCACGTGTACTAGATCGCTAATT 60.202 41.667 18.38 0.00 0.00 1.40
2867 7354 4.738740 GCACGTGTACTAGATCGCTAATTT 59.261 41.667 18.38 0.00 0.00 1.82
2868 7355 5.331607 GCACGTGTACTAGATCGCTAATTTG 60.332 44.000 18.38 0.00 0.00 2.32
2869 7356 5.969435 CACGTGTACTAGATCGCTAATTTGA 59.031 40.000 7.58 0.00 0.00 2.69
2870 7357 5.970023 ACGTGTACTAGATCGCTAATTTGAC 59.030 40.000 0.00 0.00 0.00 3.18
2871 7358 5.398711 CGTGTACTAGATCGCTAATTTGACC 59.601 44.000 0.00 0.00 0.00 4.02
2872 7359 6.270815 GTGTACTAGATCGCTAATTTGACCA 58.729 40.000 0.00 0.00 0.00 4.02
2873 7360 6.755141 GTGTACTAGATCGCTAATTTGACCAA 59.245 38.462 0.00 0.00 0.00 3.67
2874 7361 6.755141 TGTACTAGATCGCTAATTTGACCAAC 59.245 38.462 0.00 0.00 0.00 3.77
2875 7362 5.978814 ACTAGATCGCTAATTTGACCAACT 58.021 37.500 0.00 0.00 0.00 3.16
2876 7363 6.407202 ACTAGATCGCTAATTTGACCAACTT 58.593 36.000 0.00 0.00 0.00 2.66
2877 7364 7.553334 ACTAGATCGCTAATTTGACCAACTTA 58.447 34.615 0.00 0.00 0.00 2.24
2878 7365 8.038944 ACTAGATCGCTAATTTGACCAACTTAA 58.961 33.333 0.00 0.00 0.00 1.85
2879 7366 7.865706 AGATCGCTAATTTGACCAACTTAAT 57.134 32.000 0.00 0.00 0.00 1.40
2880 7367 8.958119 AGATCGCTAATTTGACCAACTTAATA 57.042 30.769 0.00 0.00 0.00 0.98
2881 7368 9.391006 AGATCGCTAATTTGACCAACTTAATAA 57.609 29.630 0.00 0.00 0.00 1.40
2882 7369 9.651718 GATCGCTAATTTGACCAACTTAATAAG 57.348 33.333 0.00 0.00 0.00 1.73
2883 7370 8.780846 TCGCTAATTTGACCAACTTAATAAGA 57.219 30.769 7.06 0.00 0.00 2.10
2884 7371 8.879759 TCGCTAATTTGACCAACTTAATAAGAG 58.120 33.333 7.06 0.00 0.00 2.85
2885 7372 8.122952 CGCTAATTTGACCAACTTAATAAGAGG 58.877 37.037 7.06 10.25 34.79 3.69
2886 7373 7.915923 GCTAATTTGACCAACTTAATAAGAGGC 59.084 37.037 7.06 5.68 32.88 4.70
2887 7374 7.775053 AATTTGACCAACTTAATAAGAGGCA 57.225 32.000 7.06 7.77 32.88 4.75
2888 7375 7.961326 ATTTGACCAACTTAATAAGAGGCAT 57.039 32.000 7.06 0.00 32.88 4.40
2889 7376 6.757897 TTGACCAACTTAATAAGAGGCATG 57.242 37.500 7.06 0.00 32.88 4.06
2890 7377 5.815581 TGACCAACTTAATAAGAGGCATGT 58.184 37.500 7.06 0.00 32.88 3.21
2891 7378 6.953101 TGACCAACTTAATAAGAGGCATGTA 58.047 36.000 7.06 0.00 32.88 2.29
2892 7379 7.573710 TGACCAACTTAATAAGAGGCATGTAT 58.426 34.615 7.06 0.00 32.88 2.29
2893 7380 8.052748 TGACCAACTTAATAAGAGGCATGTATT 58.947 33.333 7.06 0.00 32.88 1.89
2894 7381 9.555727 GACCAACTTAATAAGAGGCATGTATTA 57.444 33.333 7.06 0.00 32.88 0.98
2895 7382 9.338622 ACCAACTTAATAAGAGGCATGTATTAC 57.661 33.333 7.06 0.00 32.88 1.89
2896 7383 9.337396 CCAACTTAATAAGAGGCATGTATTACA 57.663 33.333 7.06 0.00 0.00 2.41
3000 7487 7.748847 AGTTAAATTGGCAAACTAGATACACG 58.251 34.615 3.01 0.00 31.84 4.49
3001 7488 7.389607 AGTTAAATTGGCAAACTAGATACACGT 59.610 33.333 3.01 0.00 31.84 4.49
3002 7489 5.545658 AATTGGCAAACTAGATACACGTG 57.454 39.130 15.48 15.48 0.00 4.49
3003 7490 2.343101 TGGCAAACTAGATACACGTGC 58.657 47.619 17.22 0.00 0.00 5.34
3004 7491 2.289133 TGGCAAACTAGATACACGTGCA 60.289 45.455 17.22 2.06 32.18 4.57
3005 7492 2.739913 GGCAAACTAGATACACGTGCAA 59.260 45.455 17.22 4.26 32.18 4.08
3006 7493 3.181520 GGCAAACTAGATACACGTGCAAG 60.182 47.826 17.22 8.45 32.18 4.01
3007 7494 3.725010 GCAAACTAGATACACGTGCAAGC 60.725 47.826 17.22 7.09 0.00 4.01
3008 7495 2.295253 ACTAGATACACGTGCAAGCC 57.705 50.000 17.22 0.50 0.00 4.35
3009 7496 1.825474 ACTAGATACACGTGCAAGCCT 59.175 47.619 17.22 8.48 0.00 4.58
3010 7497 2.233922 ACTAGATACACGTGCAAGCCTT 59.766 45.455 17.22 0.00 0.00 4.35
3011 7498 1.442769 AGATACACGTGCAAGCCTTG 58.557 50.000 17.22 0.00 0.00 3.61
3012 7499 1.156736 GATACACGTGCAAGCCTTGT 58.843 50.000 17.22 0.00 0.00 3.16
3013 7500 2.028476 AGATACACGTGCAAGCCTTGTA 60.028 45.455 17.22 0.00 0.00 2.41
3014 7501 2.242047 TACACGTGCAAGCCTTGTAA 57.758 45.000 17.22 0.00 0.00 2.41
3015 7502 1.384525 ACACGTGCAAGCCTTGTAAA 58.615 45.000 17.22 0.00 0.00 2.01
3016 7503 1.953686 ACACGTGCAAGCCTTGTAAAT 59.046 42.857 17.22 0.00 0.00 1.40
3017 7504 2.360801 ACACGTGCAAGCCTTGTAAATT 59.639 40.909 17.22 0.00 0.00 1.82
3018 7505 3.566322 ACACGTGCAAGCCTTGTAAATTA 59.434 39.130 17.22 0.00 0.00 1.40
3019 7506 4.036971 ACACGTGCAAGCCTTGTAAATTAA 59.963 37.500 17.22 0.00 0.00 1.40
3020 7507 4.616802 CACGTGCAAGCCTTGTAAATTAAG 59.383 41.667 0.82 0.00 0.00 1.85
3021 7508 4.517453 ACGTGCAAGCCTTGTAAATTAAGA 59.483 37.500 6.28 0.00 0.00 2.10
3022 7509 5.183140 ACGTGCAAGCCTTGTAAATTAAGAT 59.817 36.000 6.28 0.00 0.00 2.40
3023 7510 5.512788 CGTGCAAGCCTTGTAAATTAAGATG 59.487 40.000 6.28 0.00 0.00 2.90
3024 7511 6.620678 GTGCAAGCCTTGTAAATTAAGATGA 58.379 36.000 6.28 0.00 0.00 2.92
3025 7512 7.090173 GTGCAAGCCTTGTAAATTAAGATGAA 58.910 34.615 6.28 0.00 0.00 2.57
3026 7513 7.274250 GTGCAAGCCTTGTAAATTAAGATGAAG 59.726 37.037 6.28 0.00 0.00 3.02
3027 7514 6.753744 GCAAGCCTTGTAAATTAAGATGAAGG 59.246 38.462 6.28 0.00 33.10 3.46
3028 7515 7.260603 CAAGCCTTGTAAATTAAGATGAAGGG 58.739 38.462 0.00 0.00 31.03 3.95
3029 7516 6.731467 AGCCTTGTAAATTAAGATGAAGGGA 58.269 36.000 0.00 0.00 31.03 4.20
3030 7517 6.830838 AGCCTTGTAAATTAAGATGAAGGGAG 59.169 38.462 0.00 0.00 31.03 4.30
3031 7518 6.603599 GCCTTGTAAATTAAGATGAAGGGAGT 59.396 38.462 0.00 0.00 31.03 3.85
3032 7519 7.773690 GCCTTGTAAATTAAGATGAAGGGAGTA 59.226 37.037 0.00 0.00 31.03 2.59
3033 7520 9.110502 CCTTGTAAATTAAGATGAAGGGAGTAC 57.889 37.037 0.00 0.00 0.00 2.73
3034 7521 8.712285 TTGTAAATTAAGATGAAGGGAGTACG 57.288 34.615 0.00 0.00 0.00 3.67
3035 7522 7.844009 TGTAAATTAAGATGAAGGGAGTACGT 58.156 34.615 0.00 0.00 0.00 3.57
3036 7523 8.970020 TGTAAATTAAGATGAAGGGAGTACGTA 58.030 33.333 0.00 0.00 0.00 3.57
3037 7524 9.978044 GTAAATTAAGATGAAGGGAGTACGTAT 57.022 33.333 0.00 0.00 0.00 3.06
3039 7526 7.834881 ATTAAGATGAAGGGAGTACGTATCA 57.165 36.000 0.00 0.00 0.00 2.15
3040 7527 5.517322 AAGATGAAGGGAGTACGTATCAC 57.483 43.478 0.00 0.00 0.00 3.06
3041 7528 4.533815 AGATGAAGGGAGTACGTATCACA 58.466 43.478 0.00 0.00 0.00 3.58
3042 7529 4.954202 AGATGAAGGGAGTACGTATCACAA 59.046 41.667 0.00 0.00 0.00 3.33
3043 7530 4.713824 TGAAGGGAGTACGTATCACAAG 57.286 45.455 0.00 0.00 0.00 3.16
3044 7531 3.119245 TGAAGGGAGTACGTATCACAAGC 60.119 47.826 0.00 0.00 0.00 4.01
3045 7532 2.736347 AGGGAGTACGTATCACAAGCT 58.264 47.619 0.00 0.00 0.00 3.74
3046 7533 2.427453 AGGGAGTACGTATCACAAGCTG 59.573 50.000 0.00 0.00 0.00 4.24
3047 7534 2.165845 GGGAGTACGTATCACAAGCTGT 59.834 50.000 0.00 0.00 0.00 4.40
3048 7535 3.368116 GGGAGTACGTATCACAAGCTGTT 60.368 47.826 0.00 0.00 0.00 3.16
3049 7536 3.858238 GGAGTACGTATCACAAGCTGTTC 59.142 47.826 0.00 0.00 0.00 3.18
3050 7537 3.499048 AGTACGTATCACAAGCTGTTCG 58.501 45.455 0.00 0.00 0.00 3.95
3051 7538 1.068474 ACGTATCACAAGCTGTTCGC 58.932 50.000 0.00 0.00 39.57 4.70
3052 7539 0.370273 CGTATCACAAGCTGTTCGCC 59.630 55.000 0.00 0.00 40.39 5.54
3053 7540 1.726853 GTATCACAAGCTGTTCGCCT 58.273 50.000 0.00 0.00 40.39 5.52
3054 7541 1.661112 GTATCACAAGCTGTTCGCCTC 59.339 52.381 0.00 0.00 40.39 4.70
3055 7542 0.035317 ATCACAAGCTGTTCGCCTCA 59.965 50.000 0.00 0.00 40.39 3.86
3056 7543 0.035317 TCACAAGCTGTTCGCCTCAT 59.965 50.000 0.00 0.00 40.39 2.90
3057 7544 0.877071 CACAAGCTGTTCGCCTCATT 59.123 50.000 0.00 0.00 40.39 2.57
3058 7545 1.135859 CACAAGCTGTTCGCCTCATTC 60.136 52.381 0.00 0.00 40.39 2.67
3059 7546 0.449388 CAAGCTGTTCGCCTCATTCC 59.551 55.000 0.00 0.00 40.39 3.01
3060 7547 0.326264 AAGCTGTTCGCCTCATTCCT 59.674 50.000 0.00 0.00 40.39 3.36
3061 7548 1.195115 AGCTGTTCGCCTCATTCCTA 58.805 50.000 0.00 0.00 40.39 2.94
3062 7549 1.765314 AGCTGTTCGCCTCATTCCTAT 59.235 47.619 0.00 0.00 40.39 2.57
3063 7550 2.965831 AGCTGTTCGCCTCATTCCTATA 59.034 45.455 0.00 0.00 40.39 1.31
3064 7551 3.580458 AGCTGTTCGCCTCATTCCTATAT 59.420 43.478 0.00 0.00 40.39 0.86
3065 7552 4.040952 AGCTGTTCGCCTCATTCCTATATT 59.959 41.667 0.00 0.00 40.39 1.28
3066 7553 4.757149 GCTGTTCGCCTCATTCCTATATTT 59.243 41.667 0.00 0.00 0.00 1.40
3067 7554 5.334414 GCTGTTCGCCTCATTCCTATATTTG 60.334 44.000 0.00 0.00 0.00 2.32
3068 7555 4.515191 TGTTCGCCTCATTCCTATATTTGC 59.485 41.667 0.00 0.00 0.00 3.68
3069 7556 3.674997 TCGCCTCATTCCTATATTTGCC 58.325 45.455 0.00 0.00 0.00 4.52
3070 7557 3.327757 TCGCCTCATTCCTATATTTGCCT 59.672 43.478 0.00 0.00 0.00 4.75
3071 7558 4.530553 TCGCCTCATTCCTATATTTGCCTA 59.469 41.667 0.00 0.00 0.00 3.93
3072 7559 5.012664 TCGCCTCATTCCTATATTTGCCTAA 59.987 40.000 0.00 0.00 0.00 2.69
3073 7560 5.705441 CGCCTCATTCCTATATTTGCCTAAA 59.295 40.000 0.00 0.00 0.00 1.85
3074 7561 6.128172 CGCCTCATTCCTATATTTGCCTAAAG 60.128 42.308 0.00 0.00 0.00 1.85
3075 7562 6.942576 GCCTCATTCCTATATTTGCCTAAAGA 59.057 38.462 0.00 0.00 0.00 2.52
3076 7563 7.448469 GCCTCATTCCTATATTTGCCTAAAGAA 59.552 37.037 0.00 0.00 0.00 2.52
3077 7564 9.354673 CCTCATTCCTATATTTGCCTAAAGAAA 57.645 33.333 0.00 0.00 0.00 2.52
3081 7568 9.920946 ATTCCTATATTTGCCTAAAGAAAGACA 57.079 29.630 0.00 0.00 0.00 3.41
3082 7569 9.920946 TTCCTATATTTGCCTAAAGAAAGACAT 57.079 29.630 0.00 0.00 0.00 3.06
3083 7570 9.920946 TCCTATATTTGCCTAAAGAAAGACATT 57.079 29.630 0.00 0.00 0.00 2.71
3086 7573 8.829373 ATATTTGCCTAAAGAAAGACATTCCT 57.171 30.769 0.00 0.00 38.94 3.36
3087 7574 6.976934 TTTGCCTAAAGAAAGACATTCCTT 57.023 33.333 0.00 0.00 38.94 3.36
3088 7575 6.575162 TTGCCTAAAGAAAGACATTCCTTC 57.425 37.500 0.00 0.00 38.94 3.46
3089 7576 5.880901 TGCCTAAAGAAAGACATTCCTTCT 58.119 37.500 0.00 0.00 38.94 2.85
3090 7577 6.306987 TGCCTAAAGAAAGACATTCCTTCTT 58.693 36.000 0.00 0.00 38.94 2.52
3091 7578 6.777580 TGCCTAAAGAAAGACATTCCTTCTTT 59.222 34.615 14.09 14.09 44.32 2.52
3092 7579 7.087007 GCCTAAAGAAAGACATTCCTTCTTTG 58.913 38.462 17.24 10.24 42.21 2.77
3093 7580 7.087007 CCTAAAGAAAGACATTCCTTCTTTGC 58.913 38.462 17.24 2.09 42.21 3.68
3094 7581 6.721704 AAAGAAAGACATTCCTTCTTTGCT 57.278 33.333 10.39 0.00 42.21 3.91
3095 7582 7.823745 AAAGAAAGACATTCCTTCTTTGCTA 57.176 32.000 10.39 0.00 42.21 3.49
3096 7583 7.823745 AAGAAAGACATTCCTTCTTTGCTAA 57.176 32.000 2.15 0.00 42.21 3.09
3097 7584 8.414629 AAGAAAGACATTCCTTCTTTGCTAAT 57.585 30.769 2.15 0.00 42.21 1.73
3098 7585 9.520515 AAGAAAGACATTCCTTCTTTGCTAATA 57.479 29.630 2.15 0.00 42.21 0.98
3099 7586 9.520515 AGAAAGACATTCCTTCTTTGCTAATAA 57.479 29.630 2.15 0.00 42.21 1.40
3121 7608 9.659830 AATAAAGCACAAACTCGTACTTAAAAG 57.340 29.630 0.00 0.00 0.00 2.27
3122 7609 5.668558 AGCACAAACTCGTACTTAAAAGG 57.331 39.130 0.00 0.00 0.00 3.11
3123 7610 5.121105 AGCACAAACTCGTACTTAAAAGGT 58.879 37.500 0.00 0.00 0.00 3.50
3124 7611 5.587443 AGCACAAACTCGTACTTAAAAGGTT 59.413 36.000 0.00 0.00 0.00 3.50
3125 7612 6.762661 AGCACAAACTCGTACTTAAAAGGTTA 59.237 34.615 0.00 0.00 0.00 2.85
3126 7613 6.847792 GCACAAACTCGTACTTAAAAGGTTAC 59.152 38.462 0.00 0.00 0.00 2.50
3127 7614 7.465781 GCACAAACTCGTACTTAAAAGGTTACA 60.466 37.037 0.00 0.00 0.00 2.41
3128 7615 8.060090 CACAAACTCGTACTTAAAAGGTTACAG 58.940 37.037 0.00 0.00 0.00 2.74
3129 7616 7.765819 ACAAACTCGTACTTAAAAGGTTACAGT 59.234 33.333 0.00 0.00 0.00 3.55
3130 7617 7.936950 AACTCGTACTTAAAAGGTTACAGTC 57.063 36.000 0.00 0.00 0.00 3.51
3131 7618 7.282332 ACTCGTACTTAAAAGGTTACAGTCT 57.718 36.000 0.00 0.00 0.00 3.24
3132 7619 7.366513 ACTCGTACTTAAAAGGTTACAGTCTC 58.633 38.462 0.00 0.00 0.00 3.36
3133 7620 7.230309 ACTCGTACTTAAAAGGTTACAGTCTCT 59.770 37.037 0.00 0.00 0.00 3.10
3134 7621 7.945134 TCGTACTTAAAAGGTTACAGTCTCTT 58.055 34.615 0.00 0.00 0.00 2.85
3135 7622 8.078596 TCGTACTTAAAAGGTTACAGTCTCTTC 58.921 37.037 0.00 0.00 0.00 2.87
3136 7623 7.328005 CGTACTTAAAAGGTTACAGTCTCTTCC 59.672 40.741 0.00 0.00 0.00 3.46
3137 7624 6.531923 ACTTAAAAGGTTACAGTCTCTTCCC 58.468 40.000 0.00 0.00 0.00 3.97
3138 7625 6.100714 ACTTAAAAGGTTACAGTCTCTTCCCA 59.899 38.462 0.00 0.00 0.00 4.37
3139 7626 5.382664 AAAAGGTTACAGTCTCTTCCCAA 57.617 39.130 0.00 0.00 0.00 4.12
3140 7627 4.625607 AAGGTTACAGTCTCTTCCCAAG 57.374 45.455 0.00 0.00 0.00 3.61
3141 7628 3.858135 AGGTTACAGTCTCTTCCCAAGA 58.142 45.455 0.00 0.00 35.87 3.02
3142 7629 4.232091 AGGTTACAGTCTCTTCCCAAGAA 58.768 43.478 0.00 0.00 37.02 2.52
3143 7630 4.658901 AGGTTACAGTCTCTTCCCAAGAAA 59.341 41.667 0.00 0.00 37.02 2.52
3144 7631 5.132144 AGGTTACAGTCTCTTCCCAAGAAAA 59.868 40.000 0.00 0.00 37.02 2.29
3145 7632 5.238868 GGTTACAGTCTCTTCCCAAGAAAAC 59.761 44.000 0.00 0.00 37.02 2.43
3146 7633 4.779993 ACAGTCTCTTCCCAAGAAAACT 57.220 40.909 0.00 0.00 37.02 2.66
3147 7634 4.455606 ACAGTCTCTTCCCAAGAAAACTG 58.544 43.478 18.29 18.29 46.47 3.16
3148 7635 3.251972 CAGTCTCTTCCCAAGAAAACTGC 59.748 47.826 12.20 0.00 40.97 4.40
3149 7636 2.554462 GTCTCTTCCCAAGAAAACTGCC 59.446 50.000 0.00 0.00 37.02 4.85
3150 7637 2.174639 TCTCTTCCCAAGAAAACTGCCA 59.825 45.455 0.00 0.00 37.02 4.92
3151 7638 2.958355 CTCTTCCCAAGAAAACTGCCAA 59.042 45.455 0.00 0.00 37.02 4.52
3152 7639 3.575687 CTCTTCCCAAGAAAACTGCCAAT 59.424 43.478 0.00 0.00 37.02 3.16
3153 7640 4.735369 TCTTCCCAAGAAAACTGCCAATA 58.265 39.130 0.00 0.00 33.83 1.90
3154 7641 5.332743 TCTTCCCAAGAAAACTGCCAATAT 58.667 37.500 0.00 0.00 33.83 1.28
3155 7642 5.779771 TCTTCCCAAGAAAACTGCCAATATT 59.220 36.000 0.00 0.00 33.83 1.28
3156 7643 5.404466 TCCCAAGAAAACTGCCAATATTG 57.596 39.130 8.58 8.58 0.00 1.90
3157 7644 5.083122 TCCCAAGAAAACTGCCAATATTGA 58.917 37.500 17.23 0.00 0.00 2.57
3158 7645 5.541868 TCCCAAGAAAACTGCCAATATTGAA 59.458 36.000 17.23 4.01 0.00 2.69
3159 7646 6.042552 TCCCAAGAAAACTGCCAATATTGAAA 59.957 34.615 17.23 3.65 0.00 2.69
3160 7647 6.147656 CCCAAGAAAACTGCCAATATTGAAAC 59.852 38.462 17.23 6.58 0.00 2.78
3161 7648 6.705381 CCAAGAAAACTGCCAATATTGAAACA 59.295 34.615 17.23 10.58 0.00 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
74 75 6.696411 AGATGACCATATTCAGCTAGCTAAC 58.304 40.000 18.86 0.00 40.47 2.34
104 105 9.900112 ATCTTAGTGGGGACTAGTTATTTAGAT 57.100 33.333 0.00 0.00 0.00 1.98
110 111 9.900112 AGAAATATCTTAGTGGGGACTAGTTAT 57.100 33.333 0.00 0.00 29.15 1.89
111 112 9.364653 GAGAAATATCTTAGTGGGGACTAGTTA 57.635 37.037 0.00 0.00 35.54 2.24
112 113 8.068733 AGAGAAATATCTTAGTGGGGACTAGTT 58.931 37.037 0.00 0.00 35.54 2.24
113 114 7.597327 AGAGAAATATCTTAGTGGGGACTAGT 58.403 38.462 0.00 0.00 35.54 2.57
114 115 7.726291 TGAGAGAAATATCTTAGTGGGGACTAG 59.274 40.741 0.00 0.00 35.54 2.57
115 116 7.592736 TGAGAGAAATATCTTAGTGGGGACTA 58.407 38.462 0.00 0.00 35.54 2.59
116 117 6.444704 TGAGAGAAATATCTTAGTGGGGACT 58.555 40.000 0.00 0.00 35.54 3.85
117 118 6.732896 TGAGAGAAATATCTTAGTGGGGAC 57.267 41.667 0.00 0.00 35.54 4.46
118 119 6.672218 TGTTGAGAGAAATATCTTAGTGGGGA 59.328 38.462 0.00 0.00 35.54 4.81
119 120 6.889198 TGTTGAGAGAAATATCTTAGTGGGG 58.111 40.000 0.00 0.00 35.54 4.96
120 121 7.041508 GCATGTTGAGAGAAATATCTTAGTGGG 60.042 40.741 0.00 0.00 35.54 4.61
121 122 7.496920 TGCATGTTGAGAGAAATATCTTAGTGG 59.503 37.037 0.00 0.00 35.54 4.00
122 123 8.429493 TGCATGTTGAGAGAAATATCTTAGTG 57.571 34.615 0.00 0.00 35.54 2.74
123 124 9.107177 CTTGCATGTTGAGAGAAATATCTTAGT 57.893 33.333 0.00 0.00 35.54 2.24
124 125 8.068977 GCTTGCATGTTGAGAGAAATATCTTAG 58.931 37.037 1.14 0.00 35.54 2.18
125 126 7.553760 TGCTTGCATGTTGAGAGAAATATCTTA 59.446 33.333 1.14 0.00 35.54 2.10
126 127 6.376299 TGCTTGCATGTTGAGAGAAATATCTT 59.624 34.615 1.14 0.00 35.54 2.40
127 128 5.884232 TGCTTGCATGTTGAGAGAAATATCT 59.116 36.000 1.14 0.00 39.10 1.98
128 129 6.127810 TGCTTGCATGTTGAGAGAAATATC 57.872 37.500 1.14 0.00 0.00 1.63
129 130 6.504398 CATGCTTGCATGTTGAGAGAAATAT 58.496 36.000 23.00 0.00 0.00 1.28
130 131 5.886992 CATGCTTGCATGTTGAGAGAAATA 58.113 37.500 23.00 0.00 0.00 1.40
131 132 4.744570 CATGCTTGCATGTTGAGAGAAAT 58.255 39.130 23.00 0.00 0.00 2.17
132 133 4.168922 CATGCTTGCATGTTGAGAGAAA 57.831 40.909 23.00 0.00 0.00 2.52
133 134 3.842732 CATGCTTGCATGTTGAGAGAA 57.157 42.857 23.00 0.00 0.00 2.87
146 147 1.399714 ATGATGAGGTGGCATGCTTG 58.600 50.000 18.92 0.00 0.00 4.01
147 148 2.029623 GAATGATGAGGTGGCATGCTT 58.970 47.619 18.92 0.00 0.00 3.91
148 149 1.064240 TGAATGATGAGGTGGCATGCT 60.064 47.619 18.92 0.00 0.00 3.79
149 150 1.395635 TGAATGATGAGGTGGCATGC 58.604 50.000 9.90 9.90 0.00 4.06
150 151 2.756207 TGTTGAATGATGAGGTGGCATG 59.244 45.455 0.00 0.00 0.00 4.06
151 152 3.090210 TGTTGAATGATGAGGTGGCAT 57.910 42.857 0.00 0.00 0.00 4.40
152 153 2.583024 TGTTGAATGATGAGGTGGCA 57.417 45.000 0.00 0.00 0.00 4.92
153 154 2.480759 GCATGTTGAATGATGAGGTGGC 60.481 50.000 0.00 0.00 0.00 5.01
154 155 2.756207 TGCATGTTGAATGATGAGGTGG 59.244 45.455 0.00 0.00 0.00 4.61
155 156 4.649088 ATGCATGTTGAATGATGAGGTG 57.351 40.909 0.00 0.00 0.00 4.00
156 157 6.124340 TCTTATGCATGTTGAATGATGAGGT 58.876 36.000 10.16 0.00 0.00 3.85
157 158 6.628919 TCTTATGCATGTTGAATGATGAGG 57.371 37.500 10.16 0.00 0.00 3.86
158 159 8.920509 TTTTCTTATGCATGTTGAATGATGAG 57.079 30.769 10.16 0.00 0.00 2.90
159 160 7.977293 CCTTTTCTTATGCATGTTGAATGATGA 59.023 33.333 10.16 0.00 0.00 2.92
160 161 7.977293 TCCTTTTCTTATGCATGTTGAATGATG 59.023 33.333 10.16 0.63 0.00 3.07
161 162 7.977853 GTCCTTTTCTTATGCATGTTGAATGAT 59.022 33.333 10.16 0.00 0.00 2.45
162 163 7.315142 GTCCTTTTCTTATGCATGTTGAATGA 58.685 34.615 10.16 5.71 0.00 2.57
163 164 6.532657 GGTCCTTTTCTTATGCATGTTGAATG 59.467 38.462 10.16 6.97 0.00 2.67
164 165 6.211184 TGGTCCTTTTCTTATGCATGTTGAAT 59.789 34.615 10.16 0.00 0.00 2.57
165 166 5.538053 TGGTCCTTTTCTTATGCATGTTGAA 59.462 36.000 10.16 8.00 0.00 2.69
166 167 5.048083 GTGGTCCTTTTCTTATGCATGTTGA 60.048 40.000 10.16 1.61 0.00 3.18
167 168 5.163513 GTGGTCCTTTTCTTATGCATGTTG 58.836 41.667 10.16 0.00 0.00 3.33
168 169 4.220602 GGTGGTCCTTTTCTTATGCATGTT 59.779 41.667 10.16 0.00 0.00 2.71
169 170 3.763897 GGTGGTCCTTTTCTTATGCATGT 59.236 43.478 10.16 0.00 0.00 3.21
170 171 4.019174 AGGTGGTCCTTTTCTTATGCATG 58.981 43.478 10.16 0.00 42.12 4.06
171 172 4.263905 TGAGGTGGTCCTTTTCTTATGCAT 60.264 41.667 3.79 3.79 45.24 3.96
172 173 3.073798 TGAGGTGGTCCTTTTCTTATGCA 59.926 43.478 0.00 0.00 45.24 3.96
173 174 3.686016 TGAGGTGGTCCTTTTCTTATGC 58.314 45.455 0.00 0.00 45.24 3.14
174 175 5.070001 TGTTGAGGTGGTCCTTTTCTTATG 58.930 41.667 0.00 0.00 45.24 1.90
175 176 5.319043 TGTTGAGGTGGTCCTTTTCTTAT 57.681 39.130 0.00 0.00 45.24 1.73
176 177 4.781775 TGTTGAGGTGGTCCTTTTCTTA 57.218 40.909 0.00 0.00 45.24 2.10
177 178 3.662759 TGTTGAGGTGGTCCTTTTCTT 57.337 42.857 0.00 0.00 45.24 2.52
178 179 3.490348 CATGTTGAGGTGGTCCTTTTCT 58.510 45.455 0.00 0.00 45.24 2.52
179 180 2.029918 GCATGTTGAGGTGGTCCTTTTC 60.030 50.000 0.00 0.00 45.24 2.29
180 181 1.963515 GCATGTTGAGGTGGTCCTTTT 59.036 47.619 0.00 0.00 45.24 2.27
181 182 1.133513 TGCATGTTGAGGTGGTCCTTT 60.134 47.619 0.00 0.00 45.24 3.11
182 183 0.478072 TGCATGTTGAGGTGGTCCTT 59.522 50.000 0.00 0.00 45.24 3.36
184 185 0.598065 GTTGCATGTTGAGGTGGTCC 59.402 55.000 0.00 0.00 0.00 4.46
185 186 1.609208 AGTTGCATGTTGAGGTGGTC 58.391 50.000 0.00 0.00 0.00 4.02
186 187 2.949177 TAGTTGCATGTTGAGGTGGT 57.051 45.000 0.00 0.00 0.00 4.16
187 188 3.770263 CATAGTTGCATGTTGAGGTGG 57.230 47.619 0.00 0.00 0.00 4.61
202 203 9.772973 TCGTAGTGGATTTTTAATATGCATAGT 57.227 29.630 12.79 12.33 0.00 2.12
204 205 9.549078 TGTCGTAGTGGATTTTTAATATGCATA 57.451 29.630 9.27 9.27 0.00 3.14
205 206 8.445275 TGTCGTAGTGGATTTTTAATATGCAT 57.555 30.769 3.79 3.79 0.00 3.96
206 207 7.851387 TGTCGTAGTGGATTTTTAATATGCA 57.149 32.000 0.00 0.00 0.00 3.96
207 208 7.323656 GCATGTCGTAGTGGATTTTTAATATGC 59.676 37.037 0.00 0.00 0.00 3.14
208 209 8.341903 TGCATGTCGTAGTGGATTTTTAATATG 58.658 33.333 0.00 0.00 0.00 1.78
209 210 8.445275 TGCATGTCGTAGTGGATTTTTAATAT 57.555 30.769 0.00 0.00 0.00 1.28
210 211 7.851387 TGCATGTCGTAGTGGATTTTTAATA 57.149 32.000 0.00 0.00 0.00 0.98
211 212 6.751514 TGCATGTCGTAGTGGATTTTTAAT 57.248 33.333 0.00 0.00 0.00 1.40
212 213 6.550843 CATGCATGTCGTAGTGGATTTTTAA 58.449 36.000 18.91 0.00 0.00 1.52
213 214 5.448496 GCATGCATGTCGTAGTGGATTTTTA 60.448 40.000 26.79 0.00 0.00 1.52
214 215 4.675146 GCATGCATGTCGTAGTGGATTTTT 60.675 41.667 26.79 0.00 0.00 1.94
215 216 3.181497 GCATGCATGTCGTAGTGGATTTT 60.181 43.478 26.79 0.00 0.00 1.82
216 217 2.355756 GCATGCATGTCGTAGTGGATTT 59.644 45.455 26.79 0.00 0.00 2.17
217 218 1.942657 GCATGCATGTCGTAGTGGATT 59.057 47.619 26.79 0.00 0.00 3.01
218 219 1.134431 TGCATGCATGTCGTAGTGGAT 60.134 47.619 26.79 0.00 0.00 3.41
219 220 0.248843 TGCATGCATGTCGTAGTGGA 59.751 50.000 26.79 0.00 0.00 4.02
220 221 1.003223 CATGCATGCATGTCGTAGTGG 60.003 52.381 40.30 20.25 46.20 4.00
221 222 2.378507 CATGCATGCATGTCGTAGTG 57.621 50.000 40.30 22.47 46.20 2.74
229 230 6.612247 AATGGAATTTTACATGCATGCATG 57.388 33.333 44.22 44.22 46.33 4.06
330 331 9.321562 GGAATGTTTGCAATATTTCAATGAGAT 57.678 29.630 0.00 0.00 0.00 2.75
331 332 7.765360 GGGAATGTTTGCAATATTTCAATGAGA 59.235 33.333 0.00 0.00 0.00 3.27
332 333 7.254185 CGGGAATGTTTGCAATATTTCAATGAG 60.254 37.037 0.00 0.00 0.00 2.90
333 334 6.534436 CGGGAATGTTTGCAATATTTCAATGA 59.466 34.615 0.00 0.00 0.00 2.57
334 335 6.707711 CGGGAATGTTTGCAATATTTCAATG 58.292 36.000 0.00 0.00 0.00 2.82
335 336 5.294060 GCGGGAATGTTTGCAATATTTCAAT 59.706 36.000 0.00 0.00 0.00 2.57
336 337 4.629200 GCGGGAATGTTTGCAATATTTCAA 59.371 37.500 0.00 0.00 0.00 2.69
337 338 4.180057 GCGGGAATGTTTGCAATATTTCA 58.820 39.130 0.00 0.00 0.00 2.69
338 339 4.180057 TGCGGGAATGTTTGCAATATTTC 58.820 39.130 0.00 3.36 33.80 2.17
339 340 4.199432 TGCGGGAATGTTTGCAATATTT 57.801 36.364 0.00 0.00 33.80 1.40
340 341 3.883830 TGCGGGAATGTTTGCAATATT 57.116 38.095 0.00 4.47 33.80 1.28
341 342 3.883830 TTGCGGGAATGTTTGCAATAT 57.116 38.095 0.00 0.00 41.95 1.28
344 345 0.461548 TGTTGCGGGAATGTTTGCAA 59.538 45.000 0.00 0.00 44.34 4.08
345 346 0.461548 TTGTTGCGGGAATGTTTGCA 59.538 45.000 0.00 0.00 35.15 4.08
346 347 0.858583 GTTGTTGCGGGAATGTTTGC 59.141 50.000 0.00 0.00 0.00 3.68
347 348 2.215907 TGTTGTTGCGGGAATGTTTG 57.784 45.000 0.00 0.00 0.00 2.93
348 349 2.753296 CATGTTGTTGCGGGAATGTTT 58.247 42.857 0.00 0.00 0.00 2.83
349 350 1.605202 GCATGTTGTTGCGGGAATGTT 60.605 47.619 0.00 0.00 32.06 2.71
350 351 0.038343 GCATGTTGTTGCGGGAATGT 60.038 50.000 0.00 0.00 32.06 2.71
351 352 2.740668 GCATGTTGTTGCGGGAATG 58.259 52.632 0.00 0.00 32.06 2.67
358 359 3.988525 TGCCCCGCATGTTGTTGC 61.989 61.111 0.00 0.00 39.29 4.17
367 368 1.419381 TAACTAGATGATGCCCCGCA 58.581 50.000 0.00 0.00 44.86 5.69
368 369 2.622436 GATAACTAGATGATGCCCCGC 58.378 52.381 0.00 0.00 0.00 6.13
369 370 2.567169 TGGATAACTAGATGATGCCCCG 59.433 50.000 0.00 0.00 0.00 5.73
370 371 4.851639 ATGGATAACTAGATGATGCCCC 57.148 45.455 0.00 0.00 0.00 5.80
371 372 6.609212 TCTCTATGGATAACTAGATGATGCCC 59.391 42.308 0.00 0.00 0.00 5.36
372 373 7.652524 TCTCTATGGATAACTAGATGATGCC 57.347 40.000 0.00 0.00 0.00 4.40
373 374 8.075574 CGATCTCTATGGATAACTAGATGATGC 58.924 40.741 0.00 0.00 0.00 3.91
374 375 8.567104 CCGATCTCTATGGATAACTAGATGATG 58.433 40.741 0.00 0.00 0.00 3.07
375 376 7.230510 GCCGATCTCTATGGATAACTAGATGAT 59.769 40.741 0.00 0.00 0.00 2.45
376 377 6.544197 GCCGATCTCTATGGATAACTAGATGA 59.456 42.308 0.00 0.00 0.00 2.92
377 378 6.319911 TGCCGATCTCTATGGATAACTAGATG 59.680 42.308 0.00 0.00 0.00 2.90
378 379 6.427441 TGCCGATCTCTATGGATAACTAGAT 58.573 40.000 0.00 0.00 0.00 1.98
379 380 5.816682 TGCCGATCTCTATGGATAACTAGA 58.183 41.667 0.00 0.00 0.00 2.43
380 381 6.326375 GTTGCCGATCTCTATGGATAACTAG 58.674 44.000 0.00 0.00 0.00 2.57
381 382 5.185249 GGTTGCCGATCTCTATGGATAACTA 59.815 44.000 0.00 0.00 0.00 2.24
382 383 4.021016 GGTTGCCGATCTCTATGGATAACT 60.021 45.833 0.00 0.00 0.00 2.24
383 384 4.246458 GGTTGCCGATCTCTATGGATAAC 58.754 47.826 0.00 0.00 0.00 1.89
570 827 2.681344 CAAAAGTTAGGTCCGTATGGGC 59.319 50.000 0.00 0.00 40.02 5.36
574 832 4.895668 TGGTCAAAAGTTAGGTCCGTAT 57.104 40.909 0.00 0.00 0.00 3.06
658 920 9.842775 TTTGACTTTGATCAGATCTTATAGCAT 57.157 29.630 11.83 0.00 0.00 3.79
665 927 9.342308 TGTAAAGTTTGACTTTGATCAGATCTT 57.658 29.630 11.83 0.00 46.83 2.40
667 929 9.950680 TTTGTAAAGTTTGACTTTGATCAGATC 57.049 29.630 14.50 3.11 46.83 2.75
668 930 9.956720 CTTTGTAAAGTTTGACTTTGATCAGAT 57.043 29.630 14.50 0.00 46.83 2.90
669 931 8.956426 ACTTTGTAAAGTTTGACTTTGATCAGA 58.044 29.630 14.50 0.00 46.83 3.27
881 1144 6.012771 GCCACCTATTTATAATACTCCCCTGT 60.013 42.308 0.00 0.00 0.00 4.00
882 1145 6.215636 AGCCACCTATTTATAATACTCCCCTG 59.784 42.308 0.00 0.00 0.00 4.45
884 1147 6.352823 GGAGCCACCTATTTATAATACTCCCC 60.353 46.154 0.00 0.00 35.09 4.81
952 1219 6.040955 AGACTCAATGTGTTCTTCACTGTAGA 59.959 38.462 0.00 0.00 46.27 2.59
975 1242 6.071784 TGGCTCAAATTTGTCTAGTACGTAGA 60.072 38.462 17.47 0.00 35.20 2.59
1048 1324 2.904866 CGCCGAGGAGAGGAGGAG 60.905 72.222 0.00 0.00 0.00 3.69
1110 1386 1.972198 CACGACCAGTTCCAGCCTA 59.028 57.895 0.00 0.00 0.00 3.93
1112 1388 3.050275 GCACGACCAGTTCCAGCC 61.050 66.667 0.00 0.00 0.00 4.85
1123 1399 3.490759 CATGGTGGAGCGCACGAC 61.491 66.667 11.47 11.38 0.00 4.34
1164 1440 4.162690 AGAGACGCCCCCATTCGC 62.163 66.667 0.00 0.00 0.00 4.70
1179 1455 1.641192 TGGAAGTAGAGCCTGAGGAGA 59.359 52.381 0.65 0.00 0.00 3.71
1417 1775 1.828660 CGATCACCTCGTAGCCCCT 60.829 63.158 0.00 0.00 42.56 4.79
1509 1867 1.308069 CCAGAAACACGCCATCCCTG 61.308 60.000 0.00 0.00 0.00 4.45
1510 1868 1.002134 CCAGAAACACGCCATCCCT 60.002 57.895 0.00 0.00 0.00 4.20
1515 1873 0.672889 TACGTACCAGAAACACGCCA 59.327 50.000 0.00 0.00 39.23 5.69
1585 2052 1.406069 CCTAGCTGCAGGAAATGTCGT 60.406 52.381 17.12 0.00 38.00 4.34
1586 2053 1.293924 CCTAGCTGCAGGAAATGTCG 58.706 55.000 17.12 0.00 38.00 4.35
1588 2055 0.745845 CGCCTAGCTGCAGGAAATGT 60.746 55.000 17.12 0.00 38.00 2.71
1589 2056 1.442526 CCGCCTAGCTGCAGGAAATG 61.443 60.000 17.12 7.36 38.00 2.32
1590 2057 1.153086 CCGCCTAGCTGCAGGAAAT 60.153 57.895 17.12 0.00 38.00 2.17
1942 2418 0.981183 CCAGGTTGTGGTAGTAGGCA 59.019 55.000 0.00 0.00 42.17 4.75
2149 2625 1.208052 TGGATCAGCTAGCTGTTGACC 59.792 52.381 36.99 31.33 43.96 4.02
2171 2652 6.769134 TGCATGCTAGTACGTGGTATATAT 57.231 37.500 20.33 0.00 0.00 0.86
2173 2654 5.410924 CATGCATGCTAGTACGTGGTATAT 58.589 41.667 20.33 0.00 0.00 0.86
2174 2655 4.805219 CATGCATGCTAGTACGTGGTATA 58.195 43.478 20.33 0.00 0.00 1.47
2175 2656 3.653344 CATGCATGCTAGTACGTGGTAT 58.347 45.455 20.33 0.00 0.00 2.73
2176 2657 3.092334 CATGCATGCTAGTACGTGGTA 57.908 47.619 20.33 0.00 0.00 3.25
2279 5896 1.559682 TCTTACAATCCTGGAGGTGGC 59.440 52.381 12.56 0.00 36.34 5.01
2317 5934 2.930826 ATATACGGGCAACTTGGGAG 57.069 50.000 0.00 0.00 0.00 4.30
2320 5937 3.472652 TGCTTATATACGGGCAACTTGG 58.527 45.455 2.84 0.00 0.00 3.61
2346 5963 7.953752 AGTATAGCCTGTTTCCATTAGAGTAC 58.046 38.462 0.00 0.00 0.00 2.73
2351 5968 7.680730 ACCATAGTATAGCCTGTTTCCATTAG 58.319 38.462 0.00 0.00 0.00 1.73
2360 5977 8.602424 TGCATAAAATACCATAGTATAGCCTGT 58.398 33.333 0.00 0.00 38.27 4.00
2363 5980 9.226606 TGTTGCATAAAATACCATAGTATAGCC 57.773 33.333 0.00 0.00 38.27 3.93
2370 5987 9.467258 CCTTGAATGTTGCATAAAATACCATAG 57.533 33.333 0.00 0.00 0.00 2.23
2377 5994 6.427547 CACAACCCTTGAATGTTGCATAAAAT 59.572 34.615 7.40 0.00 44.38 1.82
2391 6008 1.071814 GGCCGTACACAACCCTTGA 59.928 57.895 0.00 0.00 0.00 3.02
2392 6009 1.969589 GGGCCGTACACAACCCTTG 60.970 63.158 0.00 0.00 39.42 3.61
2405 6592 0.748450 TGTCGATAGTTTAGGGGCCG 59.252 55.000 0.00 0.00 37.40 6.13
2420 6607 1.418342 CCTAAACCCGCACGATGTCG 61.418 60.000 0.11 0.11 46.33 4.35
2433 6620 7.380333 CGGAGGAACAATTTTTACAACCTAAAC 59.620 37.037 0.00 0.00 0.00 2.01
2434 6621 7.284944 TCGGAGGAACAATTTTTACAACCTAAA 59.715 33.333 0.00 0.00 0.00 1.85
2435 6622 6.771749 TCGGAGGAACAATTTTTACAACCTAA 59.228 34.615 0.00 0.00 0.00 2.69
2436 6623 6.205270 GTCGGAGGAACAATTTTTACAACCTA 59.795 38.462 0.00 0.00 0.00 3.08
2437 6624 5.009310 GTCGGAGGAACAATTTTTACAACCT 59.991 40.000 0.00 0.00 0.00 3.50
2438 6625 5.217393 GTCGGAGGAACAATTTTTACAACC 58.783 41.667 0.00 0.00 0.00 3.77
2449 6636 2.257371 CGCTCGTCGGAGGAACAA 59.743 61.111 1.73 0.00 40.80 2.83
2460 6647 1.542187 AACTCTTAAGGGCCGCTCGT 61.542 55.000 1.03 0.00 0.00 4.18
2461 6648 0.391263 AAACTCTTAAGGGCCGCTCG 60.391 55.000 1.03 0.00 0.00 5.03
2473 6670 2.684881 CTGCTCCACACACAAAACTCTT 59.315 45.455 0.00 0.00 0.00 2.85
2493 6690 0.106769 TGCACCACACACATCAACCT 60.107 50.000 0.00 0.00 0.00 3.50
2506 6703 1.278985 CCTCCTCTTACATGTGCACCA 59.721 52.381 15.69 2.61 0.00 4.17
2507 6704 1.279271 ACCTCCTCTTACATGTGCACC 59.721 52.381 15.69 0.00 0.00 5.01
2510 6707 3.003480 GTTGACCTCCTCTTACATGTGC 58.997 50.000 9.11 0.00 0.00 4.57
2516 6713 2.271800 CATGCGTTGACCTCCTCTTAC 58.728 52.381 0.00 0.00 0.00 2.34
2523 6720 0.889186 AACCCACATGCGTTGACCTC 60.889 55.000 0.00 0.00 0.00 3.85
2543 7030 4.304110 GACGAACACCAATCAAGAGTGTA 58.696 43.478 0.00 0.00 43.69 2.90
2544 7031 3.131396 GACGAACACCAATCAAGAGTGT 58.869 45.455 0.00 0.00 46.33 3.55
2545 7032 2.155732 CGACGAACACCAATCAAGAGTG 59.844 50.000 0.00 0.00 37.53 3.51
2546 7033 2.404215 CGACGAACACCAATCAAGAGT 58.596 47.619 0.00 0.00 0.00 3.24
2550 7037 0.250124 AGGCGACGAACACCAATCAA 60.250 50.000 0.00 0.00 0.00 2.57
2565 7052 2.609427 TTCAGAGATCAATGGAGGCG 57.391 50.000 0.00 0.00 0.00 5.52
2574 7061 5.067283 CCACATGATGCAATTTCAGAGATCA 59.933 40.000 0.00 0.00 0.00 2.92
2580 7067 4.811908 TGAACCACATGATGCAATTTCAG 58.188 39.130 0.00 0.00 0.00 3.02
2583 7070 3.998341 GCTTGAACCACATGATGCAATTT 59.002 39.130 0.00 0.00 0.00 1.82
2587 7074 0.522626 CGCTTGAACCACATGATGCA 59.477 50.000 0.00 0.00 0.00 3.96
2591 7078 0.955428 GCTCCGCTTGAACCACATGA 60.955 55.000 0.00 0.00 0.00 3.07
2607 7094 2.361230 CCAAAACGGAGGGGGCTC 60.361 66.667 0.00 0.00 36.56 4.70
2614 7101 2.125202 GAACGGCCACCAAAACGGAG 62.125 60.000 2.24 0.00 38.63 4.63
2615 7102 2.124236 AACGGCCACCAAAACGGA 60.124 55.556 2.24 0.00 38.63 4.69
2616 7103 1.730451 AAGAACGGCCACCAAAACGG 61.730 55.000 2.24 0.00 42.50 4.44
2648 7135 4.683832 ACGACAAAGTATATGGTCTGCTC 58.316 43.478 0.00 0.00 0.00 4.26
2659 7146 2.372264 TCGCCCTAGACGACAAAGTAT 58.628 47.619 4.00 0.00 33.96 2.12
2665 7152 2.035449 CCATTTATCGCCCTAGACGACA 59.965 50.000 9.57 0.00 43.23 4.35
2667 7154 2.557056 CTCCATTTATCGCCCTAGACGA 59.443 50.000 9.76 9.76 44.75 4.20
2669 7156 2.037251 TGCTCCATTTATCGCCCTAGAC 59.963 50.000 0.00 0.00 0.00 2.59
2670 7157 2.325484 TGCTCCATTTATCGCCCTAGA 58.675 47.619 0.00 0.00 0.00 2.43
2674 7161 1.270550 CCAATGCTCCATTTATCGCCC 59.729 52.381 0.00 0.00 31.05 6.13
2680 7167 1.388547 GCCGACCAATGCTCCATTTA 58.611 50.000 0.00 0.00 31.05 1.40
2684 7171 4.015406 ACGCCGACCAATGCTCCA 62.015 61.111 0.00 0.00 0.00 3.86
2689 7176 2.560861 CCAACACGCCGACCAATG 59.439 61.111 0.00 0.00 0.00 2.82
2691 7178 4.858680 TGCCAACACGCCGACCAA 62.859 61.111 0.00 0.00 0.00 3.67
2700 7187 2.743928 CGGAGAGCCTGCCAACAC 60.744 66.667 0.00 0.00 0.00 3.32
2701 7188 3.241530 ACGGAGAGCCTGCCAACA 61.242 61.111 0.00 0.00 0.00 3.33
2702 7189 2.527951 ATCACGGAGAGCCTGCCAAC 62.528 60.000 0.00 0.00 0.00 3.77
2724 7211 0.388907 TTTACTACGCGGCCAGACAC 60.389 55.000 12.47 0.00 0.00 3.67
2735 7222 5.279384 CCACTATGTGTAGCCTTTACTACG 58.721 45.833 0.00 0.00 44.55 3.51
2738 7225 3.454812 CCCCACTATGTGTAGCCTTTACT 59.545 47.826 0.00 0.00 0.00 2.24
2744 7231 1.139058 CACTCCCCACTATGTGTAGCC 59.861 57.143 0.00 0.00 0.00 3.93
2745 7232 1.139058 CCACTCCCCACTATGTGTAGC 59.861 57.143 0.00 0.00 0.00 3.58
2746 7233 2.467880 ACCACTCCCCACTATGTGTAG 58.532 52.381 0.00 0.00 0.00 2.74
2747 7234 2.634639 ACCACTCCCCACTATGTGTA 57.365 50.000 0.00 0.00 0.00 2.90
2748 7235 2.570302 GTTACCACTCCCCACTATGTGT 59.430 50.000 0.00 0.00 0.00 3.72
2750 7237 2.910544 TGTTACCACTCCCCACTATGT 58.089 47.619 0.00 0.00 0.00 2.29
2758 7245 9.569122 AAATATATGTGTAATGTTACCACTCCC 57.431 33.333 0.82 0.00 32.72 4.30
2794 7281 9.113838 GGAGTAACATCACTTGACATATCATTT 57.886 33.333 0.00 0.00 33.85 2.32
2801 7288 4.780021 AGAGGGAGTAACATCACTTGACAT 59.220 41.667 0.00 0.00 31.42 3.06
2804 7291 6.436027 AGATAGAGGGAGTAACATCACTTGA 58.564 40.000 0.00 0.00 31.42 3.02
2810 7297 6.969993 AACTGAGATAGAGGGAGTAACATC 57.030 41.667 0.00 0.00 0.00 3.06
2813 7300 7.171630 TGAAAACTGAGATAGAGGGAGTAAC 57.828 40.000 0.00 0.00 0.00 2.50
2814 7301 7.455008 ACTTGAAAACTGAGATAGAGGGAGTAA 59.545 37.037 0.00 0.00 0.00 2.24
2815 7302 6.954684 ACTTGAAAACTGAGATAGAGGGAGTA 59.045 38.462 0.00 0.00 0.00 2.59
2816 7303 5.782845 ACTTGAAAACTGAGATAGAGGGAGT 59.217 40.000 0.00 0.00 0.00 3.85
2817 7304 6.154363 AGACTTGAAAACTGAGATAGAGGGAG 59.846 42.308 0.00 0.00 0.00 4.30
2818 7305 6.019748 AGACTTGAAAACTGAGATAGAGGGA 58.980 40.000 0.00 0.00 0.00 4.20
2819 7306 6.293004 AGACTTGAAAACTGAGATAGAGGG 57.707 41.667 0.00 0.00 0.00 4.30
2820 7307 6.091986 GCAAGACTTGAAAACTGAGATAGAGG 59.908 42.308 19.51 0.00 0.00 3.69
2821 7308 6.648310 TGCAAGACTTGAAAACTGAGATAGAG 59.352 38.462 19.51 0.00 0.00 2.43
2822 7309 6.425114 GTGCAAGACTTGAAAACTGAGATAGA 59.575 38.462 19.51 0.00 0.00 1.98
2823 7310 6.597614 GTGCAAGACTTGAAAACTGAGATAG 58.402 40.000 19.51 0.00 0.00 2.08
2824 7311 5.177511 CGTGCAAGACTTGAAAACTGAGATA 59.822 40.000 19.51 0.00 0.00 1.98
2825 7312 4.024556 CGTGCAAGACTTGAAAACTGAGAT 60.025 41.667 19.51 0.00 0.00 2.75
2826 7313 3.309682 CGTGCAAGACTTGAAAACTGAGA 59.690 43.478 19.51 0.00 0.00 3.27
2827 7314 3.063997 ACGTGCAAGACTTGAAAACTGAG 59.936 43.478 19.51 4.27 0.00 3.35
2828 7315 3.006940 ACGTGCAAGACTTGAAAACTGA 58.993 40.909 19.51 0.00 0.00 3.41
2829 7316 3.100817 CACGTGCAAGACTTGAAAACTG 58.899 45.455 19.51 11.13 0.00 3.16
2830 7317 2.747446 ACACGTGCAAGACTTGAAAACT 59.253 40.909 19.51 2.01 0.00 2.66
2831 7318 3.131240 ACACGTGCAAGACTTGAAAAC 57.869 42.857 19.51 11.72 0.00 2.43
2832 7319 3.936453 AGTACACGTGCAAGACTTGAAAA 59.064 39.130 19.51 0.57 0.00 2.29
2833 7320 3.527533 AGTACACGTGCAAGACTTGAAA 58.472 40.909 19.51 3.17 0.00 2.69
2834 7321 3.173668 AGTACACGTGCAAGACTTGAA 57.826 42.857 19.51 5.41 0.00 2.69
2835 7322 2.882927 AGTACACGTGCAAGACTTGA 57.117 45.000 19.51 1.50 0.00 3.02
2836 7323 3.897325 TCTAGTACACGTGCAAGACTTG 58.103 45.455 17.22 11.02 0.00 3.16
2837 7324 4.672024 CGATCTAGTACACGTGCAAGACTT 60.672 45.833 17.22 0.00 0.00 3.01
2838 7325 3.181509 CGATCTAGTACACGTGCAAGACT 60.182 47.826 17.22 15.70 0.00 3.24
2839 7326 3.099362 CGATCTAGTACACGTGCAAGAC 58.901 50.000 17.22 8.87 0.00 3.01
2840 7327 2.477357 GCGATCTAGTACACGTGCAAGA 60.477 50.000 17.22 13.29 0.00 3.02
2841 7328 1.846782 GCGATCTAGTACACGTGCAAG 59.153 52.381 17.22 8.05 0.00 4.01
2842 7329 1.471287 AGCGATCTAGTACACGTGCAA 59.529 47.619 17.22 0.27 0.00 4.08
2843 7330 1.092348 AGCGATCTAGTACACGTGCA 58.908 50.000 17.22 0.00 0.00 4.57
2844 7331 3.329743 TTAGCGATCTAGTACACGTGC 57.670 47.619 17.22 0.00 0.00 5.34
2845 7332 5.969435 TCAAATTAGCGATCTAGTACACGTG 59.031 40.000 15.48 15.48 0.00 4.49
2846 7333 5.970023 GTCAAATTAGCGATCTAGTACACGT 59.030 40.000 0.00 0.00 0.00 4.49
2847 7334 5.398711 GGTCAAATTAGCGATCTAGTACACG 59.601 44.000 0.00 0.00 0.00 4.49
2848 7335 6.270815 TGGTCAAATTAGCGATCTAGTACAC 58.729 40.000 0.00 0.00 0.00 2.90
2849 7336 6.459670 TGGTCAAATTAGCGATCTAGTACA 57.540 37.500 0.00 0.00 0.00 2.90
2850 7337 6.979238 AGTTGGTCAAATTAGCGATCTAGTAC 59.021 38.462 0.00 0.00 0.00 2.73
2851 7338 7.108841 AGTTGGTCAAATTAGCGATCTAGTA 57.891 36.000 0.00 0.00 0.00 1.82
2852 7339 5.978814 AGTTGGTCAAATTAGCGATCTAGT 58.021 37.500 0.00 0.00 0.00 2.57
2853 7340 6.910536 AAGTTGGTCAAATTAGCGATCTAG 57.089 37.500 0.00 0.00 0.00 2.43
2854 7341 8.958119 ATTAAGTTGGTCAAATTAGCGATCTA 57.042 30.769 4.26 0.00 33.28 1.98
2855 7342 7.865706 ATTAAGTTGGTCAAATTAGCGATCT 57.134 32.000 4.26 0.00 33.28 2.75
2856 7343 9.651718 CTTATTAAGTTGGTCAAATTAGCGATC 57.348 33.333 4.26 0.00 33.28 3.69
2857 7344 9.391006 TCTTATTAAGTTGGTCAAATTAGCGAT 57.609 29.630 3.45 0.00 33.28 4.58
2858 7345 8.780846 TCTTATTAAGTTGGTCAAATTAGCGA 57.219 30.769 3.45 0.00 33.28 4.93
2859 7346 8.122952 CCTCTTATTAAGTTGGTCAAATTAGCG 58.877 37.037 3.45 0.00 33.28 4.26
2860 7347 7.915923 GCCTCTTATTAAGTTGGTCAAATTAGC 59.084 37.037 14.72 0.55 33.28 3.09
2861 7348 8.956426 TGCCTCTTATTAAGTTGGTCAAATTAG 58.044 33.333 14.72 0.00 33.28 1.73
2862 7349 8.871629 TGCCTCTTATTAAGTTGGTCAAATTA 57.128 30.769 14.72 0.28 30.75 1.40
2863 7350 7.775053 TGCCTCTTATTAAGTTGGTCAAATT 57.225 32.000 14.72 2.10 32.98 1.82
2864 7351 7.397192 ACATGCCTCTTATTAAGTTGGTCAAAT 59.603 33.333 14.72 0.00 0.00 2.32
2865 7352 6.719370 ACATGCCTCTTATTAAGTTGGTCAAA 59.281 34.615 14.72 4.97 0.00 2.69
2866 7353 6.245408 ACATGCCTCTTATTAAGTTGGTCAA 58.755 36.000 14.72 0.00 0.00 3.18
2867 7354 5.815581 ACATGCCTCTTATTAAGTTGGTCA 58.184 37.500 14.72 13.43 0.00 4.02
2868 7355 8.451908 AATACATGCCTCTTATTAAGTTGGTC 57.548 34.615 14.72 10.17 0.00 4.02
2869 7356 9.338622 GTAATACATGCCTCTTATTAAGTTGGT 57.661 33.333 14.72 6.00 0.00 3.67
2870 7357 9.337396 TGTAATACATGCCTCTTATTAAGTTGG 57.663 33.333 3.45 8.14 0.00 3.77
2974 7461 8.234546 CGTGTATCTAGTTTGCCAATTTAACTT 58.765 33.333 0.00 0.00 34.26 2.66
2975 7462 7.389607 ACGTGTATCTAGTTTGCCAATTTAACT 59.610 33.333 0.00 0.00 36.23 2.24
2976 7463 7.480542 CACGTGTATCTAGTTTGCCAATTTAAC 59.519 37.037 7.58 0.00 0.00 2.01
2977 7464 7.523219 CACGTGTATCTAGTTTGCCAATTTAA 58.477 34.615 7.58 0.00 0.00 1.52
2978 7465 6.402766 GCACGTGTATCTAGTTTGCCAATTTA 60.403 38.462 18.38 0.00 0.00 1.40
2979 7466 5.619086 GCACGTGTATCTAGTTTGCCAATTT 60.619 40.000 18.38 0.00 0.00 1.82
2980 7467 4.142687 GCACGTGTATCTAGTTTGCCAATT 60.143 41.667 18.38 0.00 0.00 2.32
2981 7468 3.374058 GCACGTGTATCTAGTTTGCCAAT 59.626 43.478 18.38 0.00 0.00 3.16
2982 7469 2.739913 GCACGTGTATCTAGTTTGCCAA 59.260 45.455 18.38 0.00 0.00 4.52
2983 7470 2.289133 TGCACGTGTATCTAGTTTGCCA 60.289 45.455 18.38 0.00 0.00 4.92
2984 7471 2.343101 TGCACGTGTATCTAGTTTGCC 58.657 47.619 18.38 0.00 0.00 4.52
2985 7472 3.725010 GCTTGCACGTGTATCTAGTTTGC 60.725 47.826 18.38 0.00 0.00 3.68
2986 7473 3.181520 GGCTTGCACGTGTATCTAGTTTG 60.182 47.826 18.38 0.00 0.00 2.93
2987 7474 3.000727 GGCTTGCACGTGTATCTAGTTT 58.999 45.455 18.38 0.00 0.00 2.66
2988 7475 2.233922 AGGCTTGCACGTGTATCTAGTT 59.766 45.455 18.38 0.00 0.00 2.24
2989 7476 1.825474 AGGCTTGCACGTGTATCTAGT 59.175 47.619 18.38 0.00 0.00 2.57
2990 7477 2.586258 AGGCTTGCACGTGTATCTAG 57.414 50.000 18.38 8.43 0.00 2.43
2991 7478 2.028476 ACAAGGCTTGCACGTGTATCTA 60.028 45.455 26.45 0.00 0.00 1.98
2992 7479 1.270839 ACAAGGCTTGCACGTGTATCT 60.271 47.619 26.45 8.01 0.00 1.98
2993 7480 1.156736 ACAAGGCTTGCACGTGTATC 58.843 50.000 26.45 7.60 0.00 2.24
2994 7481 2.465860 TACAAGGCTTGCACGTGTAT 57.534 45.000 26.45 7.51 32.90 2.29
2995 7482 2.242047 TTACAAGGCTTGCACGTGTA 57.758 45.000 26.45 10.46 32.90 2.90
2996 7483 1.384525 TTTACAAGGCTTGCACGTGT 58.615 45.000 26.45 9.79 34.94 4.49
2997 7484 2.704725 ATTTACAAGGCTTGCACGTG 57.295 45.000 26.45 12.28 0.00 4.49
2998 7485 4.517453 TCTTAATTTACAAGGCTTGCACGT 59.483 37.500 26.45 10.11 0.00 4.49
2999 7486 5.041951 TCTTAATTTACAAGGCTTGCACG 57.958 39.130 26.45 3.82 0.00 5.34
3000 7487 6.620678 TCATCTTAATTTACAAGGCTTGCAC 58.379 36.000 26.45 0.00 0.00 4.57
3001 7488 6.832520 TCATCTTAATTTACAAGGCTTGCA 57.167 33.333 26.45 12.05 0.00 4.08
3002 7489 6.753744 CCTTCATCTTAATTTACAAGGCTTGC 59.246 38.462 26.45 0.00 0.00 4.01
3003 7490 7.122650 TCCCTTCATCTTAATTTACAAGGCTTG 59.877 37.037 25.06 25.06 0.00 4.01
3004 7491 7.182060 TCCCTTCATCTTAATTTACAAGGCTT 58.818 34.615 0.00 0.00 0.00 4.35
3005 7492 6.731467 TCCCTTCATCTTAATTTACAAGGCT 58.269 36.000 0.00 0.00 0.00 4.58
3006 7493 6.603599 ACTCCCTTCATCTTAATTTACAAGGC 59.396 38.462 0.00 0.00 0.00 4.35
3007 7494 9.110502 GTACTCCCTTCATCTTAATTTACAAGG 57.889 37.037 0.00 0.00 0.00 3.61
3008 7495 8.818057 CGTACTCCCTTCATCTTAATTTACAAG 58.182 37.037 0.00 0.00 0.00 3.16
3009 7496 8.316214 ACGTACTCCCTTCATCTTAATTTACAA 58.684 33.333 0.00 0.00 0.00 2.41
3010 7497 7.844009 ACGTACTCCCTTCATCTTAATTTACA 58.156 34.615 0.00 0.00 0.00 2.41
3011 7498 9.978044 ATACGTACTCCCTTCATCTTAATTTAC 57.022 33.333 0.00 0.00 0.00 2.01
3013 7500 8.701895 TGATACGTACTCCCTTCATCTTAATTT 58.298 33.333 0.00 0.00 0.00 1.82
3014 7501 8.142551 GTGATACGTACTCCCTTCATCTTAATT 58.857 37.037 0.00 0.00 0.00 1.40
3015 7502 7.287005 TGTGATACGTACTCCCTTCATCTTAAT 59.713 37.037 0.00 0.00 0.00 1.40
3016 7503 6.604396 TGTGATACGTACTCCCTTCATCTTAA 59.396 38.462 0.00 0.00 0.00 1.85
3017 7504 6.124340 TGTGATACGTACTCCCTTCATCTTA 58.876 40.000 0.00 0.00 0.00 2.10
3018 7505 4.954202 TGTGATACGTACTCCCTTCATCTT 59.046 41.667 0.00 0.00 0.00 2.40
3019 7506 4.533815 TGTGATACGTACTCCCTTCATCT 58.466 43.478 0.00 0.00 0.00 2.90
3020 7507 4.913335 TGTGATACGTACTCCCTTCATC 57.087 45.455 0.00 0.00 0.00 2.92
3021 7508 4.441634 GCTTGTGATACGTACTCCCTTCAT 60.442 45.833 0.00 0.00 0.00 2.57
3022 7509 3.119245 GCTTGTGATACGTACTCCCTTCA 60.119 47.826 0.00 0.00 0.00 3.02
3023 7510 3.130693 AGCTTGTGATACGTACTCCCTTC 59.869 47.826 0.00 0.00 0.00 3.46
3024 7511 3.097614 AGCTTGTGATACGTACTCCCTT 58.902 45.455 0.00 0.00 0.00 3.95
3025 7512 2.427453 CAGCTTGTGATACGTACTCCCT 59.573 50.000 0.00 0.00 0.00 4.20
3026 7513 2.165845 ACAGCTTGTGATACGTACTCCC 59.834 50.000 0.00 0.00 0.00 4.30
3027 7514 3.505464 ACAGCTTGTGATACGTACTCC 57.495 47.619 0.00 0.00 0.00 3.85
3028 7515 3.542704 CGAACAGCTTGTGATACGTACTC 59.457 47.826 0.00 0.00 0.00 2.59
3029 7516 3.499048 CGAACAGCTTGTGATACGTACT 58.501 45.455 0.00 0.00 0.00 2.73
3030 7517 2.027688 GCGAACAGCTTGTGATACGTAC 59.972 50.000 0.00 0.00 44.04 3.67
3031 7518 2.256174 GCGAACAGCTTGTGATACGTA 58.744 47.619 0.00 0.00 44.04 3.57
3032 7519 1.068474 GCGAACAGCTTGTGATACGT 58.932 50.000 0.00 0.00 44.04 3.57
3033 7520 3.858040 GCGAACAGCTTGTGATACG 57.142 52.632 0.00 0.00 44.04 3.06
3044 7531 5.334414 GCAAATATAGGAATGAGGCGAACAG 60.334 44.000 0.00 0.00 0.00 3.16
3045 7532 4.515191 GCAAATATAGGAATGAGGCGAACA 59.485 41.667 0.00 0.00 0.00 3.18
3046 7533 4.083271 GGCAAATATAGGAATGAGGCGAAC 60.083 45.833 0.00 0.00 0.00 3.95
3047 7534 4.072131 GGCAAATATAGGAATGAGGCGAA 58.928 43.478 0.00 0.00 0.00 4.70
3048 7535 3.327757 AGGCAAATATAGGAATGAGGCGA 59.672 43.478 0.00 0.00 0.00 5.54
3049 7536 3.679389 AGGCAAATATAGGAATGAGGCG 58.321 45.455 0.00 0.00 0.00 5.52
3050 7537 6.942576 TCTTTAGGCAAATATAGGAATGAGGC 59.057 38.462 0.00 0.00 0.00 4.70
3051 7538 8.924511 TTCTTTAGGCAAATATAGGAATGAGG 57.075 34.615 0.00 0.00 0.00 3.86
3055 7542 9.920946 TGTCTTTCTTTAGGCAAATATAGGAAT 57.079 29.630 0.00 0.00 0.00 3.01
3056 7543 9.920946 ATGTCTTTCTTTAGGCAAATATAGGAA 57.079 29.630 0.00 0.00 32.74 3.36
3057 7544 9.920946 AATGTCTTTCTTTAGGCAAATATAGGA 57.079 29.630 0.00 0.00 32.74 2.94
3060 7547 9.920946 AGGAATGTCTTTCTTTAGGCAAATATA 57.079 29.630 0.00 0.00 32.74 0.86
3061 7548 8.829373 AGGAATGTCTTTCTTTAGGCAAATAT 57.171 30.769 0.00 0.00 32.74 1.28
3062 7549 8.650143 AAGGAATGTCTTTCTTTAGGCAAATA 57.350 30.769 0.00 0.00 32.33 1.40
3063 7550 7.452813 AGAAGGAATGTCTTTCTTTAGGCAAAT 59.547 33.333 0.00 0.00 39.39 2.32
3064 7551 6.777580 AGAAGGAATGTCTTTCTTTAGGCAAA 59.222 34.615 0.00 0.00 39.39 3.68
3065 7552 6.306987 AGAAGGAATGTCTTTCTTTAGGCAA 58.693 36.000 0.00 0.00 39.39 4.52
3066 7553 5.880901 AGAAGGAATGTCTTTCTTTAGGCA 58.119 37.500 0.00 0.00 39.39 4.75
3067 7554 6.825944 AAGAAGGAATGTCTTTCTTTAGGC 57.174 37.500 8.97 0.00 46.37 3.93
3073 7560 9.520515 TTATTAGCAAAGAAGGAATGTCTTTCT 57.479 29.630 0.00 0.00 43.46 2.52
3095 7582 9.659830 CTTTTAAGTACGAGTTTGTGCTTTATT 57.340 29.630 7.94 0.00 41.18 1.40
3096 7583 8.287503 CCTTTTAAGTACGAGTTTGTGCTTTAT 58.712 33.333 7.94 0.00 41.18 1.40
3097 7584 7.280652 ACCTTTTAAGTACGAGTTTGTGCTTTA 59.719 33.333 7.94 0.00 41.18 1.85
3098 7585 6.094464 ACCTTTTAAGTACGAGTTTGTGCTTT 59.906 34.615 7.94 0.00 41.18 3.51
3099 7586 5.587443 ACCTTTTAAGTACGAGTTTGTGCTT 59.413 36.000 7.78 7.78 45.07 3.91
3100 7587 5.121105 ACCTTTTAAGTACGAGTTTGTGCT 58.879 37.500 0.00 0.00 36.28 4.40
3101 7588 5.413969 ACCTTTTAAGTACGAGTTTGTGC 57.586 39.130 0.00 0.00 0.00 4.57
3102 7589 7.908230 TGTAACCTTTTAAGTACGAGTTTGTG 58.092 34.615 0.00 0.00 0.00 3.33
3103 7590 7.765819 ACTGTAACCTTTTAAGTACGAGTTTGT 59.234 33.333 0.00 0.00 0.00 2.83
3104 7591 8.134905 ACTGTAACCTTTTAAGTACGAGTTTG 57.865 34.615 0.00 0.00 0.00 2.93
3105 7592 8.200120 AGACTGTAACCTTTTAAGTACGAGTTT 58.800 33.333 0.00 0.00 0.00 2.66
3106 7593 7.720442 AGACTGTAACCTTTTAAGTACGAGTT 58.280 34.615 0.00 0.00 0.00 3.01
3107 7594 7.230309 AGAGACTGTAACCTTTTAAGTACGAGT 59.770 37.037 0.00 0.00 0.00 4.18
3108 7595 7.592051 AGAGACTGTAACCTTTTAAGTACGAG 58.408 38.462 0.00 0.00 0.00 4.18
3109 7596 7.516198 AGAGACTGTAACCTTTTAAGTACGA 57.484 36.000 0.00 0.00 0.00 3.43
3110 7597 7.328005 GGAAGAGACTGTAACCTTTTAAGTACG 59.672 40.741 0.00 0.00 0.00 3.67
3111 7598 7.601886 GGGAAGAGACTGTAACCTTTTAAGTAC 59.398 40.741 0.00 0.00 0.00 2.73
3112 7599 7.290714 TGGGAAGAGACTGTAACCTTTTAAGTA 59.709 37.037 0.00 0.00 0.00 2.24
3113 7600 6.100714 TGGGAAGAGACTGTAACCTTTTAAGT 59.899 38.462 0.00 0.00 0.00 2.24
3114 7601 6.531021 TGGGAAGAGACTGTAACCTTTTAAG 58.469 40.000 0.00 0.00 0.00 1.85
3115 7602 6.503560 TGGGAAGAGACTGTAACCTTTTAA 57.496 37.500 0.00 0.00 0.00 1.52
3116 7603 6.328148 TCTTGGGAAGAGACTGTAACCTTTTA 59.672 38.462 0.00 0.00 32.71 1.52
3117 7604 5.132144 TCTTGGGAAGAGACTGTAACCTTTT 59.868 40.000 0.00 0.00 32.71 2.27
3118 7605 4.658901 TCTTGGGAAGAGACTGTAACCTTT 59.341 41.667 0.00 0.00 32.71 3.11
3119 7606 4.232091 TCTTGGGAAGAGACTGTAACCTT 58.768 43.478 0.00 0.00 32.71 3.50
3120 7607 3.858135 TCTTGGGAAGAGACTGTAACCT 58.142 45.455 0.00 0.00 32.71 3.50
3121 7608 4.618920 TTCTTGGGAAGAGACTGTAACC 57.381 45.455 0.00 0.00 39.03 2.85
3122 7609 6.017852 CAGTTTTCTTGGGAAGAGACTGTAAC 60.018 42.308 16.25 0.00 42.42 2.50
3123 7610 6.055588 CAGTTTTCTTGGGAAGAGACTGTAA 58.944 40.000 16.25 0.00 42.42 2.41
3124 7611 5.611374 CAGTTTTCTTGGGAAGAGACTGTA 58.389 41.667 16.25 0.00 42.42 2.74
3125 7612 4.455606 CAGTTTTCTTGGGAAGAGACTGT 58.544 43.478 16.25 0.00 42.42 3.55
3126 7613 3.251972 GCAGTTTTCTTGGGAAGAGACTG 59.748 47.826 18.33 18.33 45.88 3.51
3127 7614 3.481453 GCAGTTTTCTTGGGAAGAGACT 58.519 45.455 0.00 0.00 39.03 3.24
3128 7615 2.554462 GGCAGTTTTCTTGGGAAGAGAC 59.446 50.000 0.00 0.00 39.03 3.36
3129 7616 2.174639 TGGCAGTTTTCTTGGGAAGAGA 59.825 45.455 0.00 0.00 39.03 3.10
3130 7617 2.586425 TGGCAGTTTTCTTGGGAAGAG 58.414 47.619 0.00 0.00 39.03 2.85
3131 7618 2.746279 TGGCAGTTTTCTTGGGAAGA 57.254 45.000 0.00 0.00 35.26 2.87
3132 7619 5.665916 ATATTGGCAGTTTTCTTGGGAAG 57.334 39.130 0.00 0.00 32.61 3.46
3133 7620 5.541868 TCAATATTGGCAGTTTTCTTGGGAA 59.458 36.000 15.36 0.00 0.00 3.97
3134 7621 5.083122 TCAATATTGGCAGTTTTCTTGGGA 58.917 37.500 15.36 0.00 0.00 4.37
3135 7622 5.404466 TCAATATTGGCAGTTTTCTTGGG 57.596 39.130 15.36 0.00 0.00 4.12
3136 7623 6.705381 TGTTTCAATATTGGCAGTTTTCTTGG 59.295 34.615 15.36 0.00 0.00 3.61
3137 7624 7.712264 TGTTTCAATATTGGCAGTTTTCTTG 57.288 32.000 15.36 0.00 0.00 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.