Multiple sequence alignment - TraesCS6A01G038600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G038600 chr6A 100.000 1971 0 0 1 1971 19175910 19173940 0.000000e+00 3640
1 TraesCS6A01G038600 chr6A 82.735 892 106 27 820 1698 19162340 19161484 0.000000e+00 750
2 TraesCS6A01G038600 chr6A 87.459 614 51 13 1049 1655 19167482 19168076 0.000000e+00 684
3 TraesCS6A01G038600 chr6A 100.000 290 0 0 2440 2729 19173471 19173182 1.110000e-148 536
4 TraesCS6A01G038600 chr6B 88.239 1709 137 29 4 1680 33043388 33041712 0.000000e+00 1984
5 TraesCS6A01G038600 chr6B 84.332 868 82 31 814 1655 33011340 33012179 0.000000e+00 800
6 TraesCS6A01G038600 chr6B 81.848 920 106 25 806 1698 32998477 32997592 0.000000e+00 717
7 TraesCS6A01G038600 chr6B 92.737 179 11 2 1682 1859 33041664 33041487 9.700000e-65 257
8 TraesCS6A01G038600 chr6D 82.962 898 106 22 820 1698 18937568 18936699 0.000000e+00 767
9 TraesCS6A01G038600 chr6D 82.629 875 88 31 817 1655 18940491 18941337 0.000000e+00 715
10 TraesCS6A01G038600 chr6D 94.521 146 8 0 4 149 19084378 19084233 2.730000e-55 226
11 TraesCS6A01G038600 chr7D 93.529 340 22 0 1246 1585 108085665 108086004 8.720000e-140 507
12 TraesCS6A01G038600 chr7D 92.878 337 24 0 1246 1582 108412607 108412943 8.780000e-135 490


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G038600 chr6A 19173182 19175910 2728 True 2088.0 3640 100.000 1 2729 2 chr6A.!!$R2 2728
1 TraesCS6A01G038600 chr6A 19161484 19162340 856 True 750.0 750 82.735 820 1698 1 chr6A.!!$R1 878
2 TraesCS6A01G038600 chr6A 19167482 19168076 594 False 684.0 684 87.459 1049 1655 1 chr6A.!!$F1 606
3 TraesCS6A01G038600 chr6B 33041487 33043388 1901 True 1120.5 1984 90.488 4 1859 2 chr6B.!!$R2 1855
4 TraesCS6A01G038600 chr6B 33011340 33012179 839 False 800.0 800 84.332 814 1655 1 chr6B.!!$F1 841
5 TraesCS6A01G038600 chr6B 32997592 32998477 885 True 717.0 717 81.848 806 1698 1 chr6B.!!$R1 892
6 TraesCS6A01G038600 chr6D 18936699 18937568 869 True 767.0 767 82.962 820 1698 1 chr6D.!!$R1 878
7 TraesCS6A01G038600 chr6D 18940491 18941337 846 False 715.0 715 82.629 817 1655 1 chr6D.!!$F1 838

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
56 57 0.036732 TCTCTGAATTTGCCACCGCT 59.963 50.0 0.0 0.0 35.36 5.52 F
739 750 0.102300 TGCGTGATCCGGTGACTATG 59.898 55.0 0.0 0.0 36.94 2.23 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1339 1418 0.174389 GCAGATCCGTGCTCTTCTGA 59.826 55.0 11.87 0.00 40.54 3.27 R
2522 2663 0.179029 ACAACCTTCCTGACGTTGGG 60.179 55.0 8.38 5.25 40.92 4.12 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 8.845413 ATATCTAGTTCATGGCAAAAGATCTC 57.155 34.615 0.00 0.00 0.00 2.75
52 53 4.624452 GCAAAAGATCTCTGAATTTGCCAC 59.376 41.667 22.74 4.63 46.14 5.01
54 55 2.636830 AGATCTCTGAATTTGCCACCG 58.363 47.619 0.00 0.00 0.00 4.94
55 56 1.064654 GATCTCTGAATTTGCCACCGC 59.935 52.381 0.00 0.00 0.00 5.68
56 57 0.036732 TCTCTGAATTTGCCACCGCT 59.963 50.000 0.00 0.00 35.36 5.52
57 58 1.277842 TCTCTGAATTTGCCACCGCTA 59.722 47.619 0.00 0.00 35.36 4.26
58 59 2.092968 TCTCTGAATTTGCCACCGCTAT 60.093 45.455 0.00 0.00 35.36 2.97
59 60 2.016318 TCTGAATTTGCCACCGCTATG 58.984 47.619 0.00 0.00 35.36 2.23
60 61 1.066002 CTGAATTTGCCACCGCTATGG 59.934 52.381 0.00 0.00 46.41 2.74
87 88 7.361457 AGGAAACGATCTCTAATTCATGGTA 57.639 36.000 0.00 0.00 0.00 3.25
91 92 9.922305 GAAACGATCTCTAATTCATGGTAAAAG 57.078 33.333 0.00 0.00 0.00 2.27
158 159 9.474920 TTCTACAAATTGATGGAAAATTCACAC 57.525 29.630 0.00 0.00 0.00 3.82
159 160 8.637099 TCTACAAATTGATGGAAAATTCACACA 58.363 29.630 0.00 0.00 0.00 3.72
160 161 7.718272 ACAAATTGATGGAAAATTCACACAG 57.282 32.000 0.00 0.00 0.00 3.66
172 173 8.730680 GGAAAATTCACACAGAACATAGTACAT 58.269 33.333 0.00 0.00 39.49 2.29
178 179 6.645003 TCACACAGAACATAGTACATTGACAC 59.355 38.462 0.00 0.00 0.00 3.67
186 187 6.110033 ACATAGTACATTGACACGGCAATTA 58.890 36.000 0.00 0.00 36.39 1.40
188 189 7.282224 ACATAGTACATTGACACGGCAATTATT 59.718 33.333 0.00 0.00 36.39 1.40
191 192 6.806249 AGTACATTGACACGGCAATTATTTTG 59.194 34.615 0.00 0.00 36.39 2.44
192 193 4.388469 ACATTGACACGGCAATTATTTTGC 59.612 37.500 0.00 1.76 44.22 3.68
196 198 4.811024 TGACACGGCAATTATTTTGCAAAA 59.189 33.333 25.76 25.76 46.58 2.44
204 206 6.585702 GGCAATTATTTTGCAAAATTTCCACC 59.414 34.615 35.18 26.82 46.58 4.61
218 220 7.814264 AAATTTCCACCAAACAAATGCATAA 57.186 28.000 0.00 0.00 0.00 1.90
264 267 6.694877 AGTAACTATATGAGCACAACGAGA 57.305 37.500 0.00 0.00 0.00 4.04
265 268 6.730175 AGTAACTATATGAGCACAACGAGAG 58.270 40.000 0.00 0.00 0.00 3.20
275 285 2.608261 GCACAACGAGAGACTTGCTAGT 60.608 50.000 0.00 0.00 37.31 2.57
279 289 5.117287 CACAACGAGAGACTTGCTAGTAAAC 59.883 44.000 0.00 0.00 33.84 2.01
285 295 6.531503 AGAGACTTGCTAGTAAACTATGCA 57.468 37.500 0.00 0.00 33.84 3.96
310 320 4.432712 GGCACAACAAAGTTGATTTCAGT 58.567 39.130 15.99 0.00 0.00 3.41
324 334 8.525316 AGTTGATTTCAGTCATTCATGCATTTA 58.475 29.630 0.00 0.00 0.00 1.40
378 388 2.101249 ACATGGGCACAACAAAGTTGAG 59.899 45.455 15.99 9.54 0.00 3.02
385 395 4.202050 GGCACAACAAAGTTGAGTTCAGAT 60.202 41.667 15.99 0.00 0.00 2.90
393 403 6.703607 ACAAAGTTGAGTTCAGATCTGTACAG 59.296 38.462 27.81 17.17 33.97 2.74
394 404 6.656632 AAGTTGAGTTCAGATCTGTACAGA 57.343 37.500 27.07 27.07 42.37 3.41
411 421 5.582269 TGTACAGATCTAAAGCTGCAATGAC 59.418 40.000 1.02 0.00 42.81 3.06
412 422 4.841422 ACAGATCTAAAGCTGCAATGACT 58.159 39.130 1.02 0.00 42.81 3.41
416 426 6.200665 CAGATCTAAAGCTGCAATGACTAGTC 59.799 42.308 16.32 16.32 31.11 2.59
442 452 2.954318 AGATACATGGGCACATCAAAGC 59.046 45.455 0.00 0.00 34.35 3.51
450 460 2.613691 GGCACATCAAAGCTGAATTGG 58.386 47.619 0.00 0.00 34.49 3.16
475 485 4.734695 GCAAATGTAGTGCTAGGGAATTGC 60.735 45.833 0.00 0.00 39.00 3.56
507 517 2.160822 TTCAGAAGTGACAGAGCAGC 57.839 50.000 0.00 0.00 30.10 5.25
508 518 0.319728 TCAGAAGTGACAGAGCAGCC 59.680 55.000 0.00 0.00 0.00 4.85
523 533 1.886313 AGCCATGAGAATGAGCGCG 60.886 57.895 0.00 0.00 0.00 6.86
525 535 1.640069 CCATGAGAATGAGCGCGTG 59.360 57.895 8.43 0.00 0.00 5.34
528 538 2.510238 GAGAATGAGCGCGTGCCT 60.510 61.111 19.02 6.88 44.31 4.75
541 551 0.307760 CGTGCCTGTTTCCACTTGAC 59.692 55.000 0.00 0.00 0.00 3.18
553 563 2.029020 TCCACTTGACGACATGAAGGAG 60.029 50.000 0.00 0.00 31.56 3.69
571 581 2.033424 GGAGACCACAACACTTGAAAGC 59.967 50.000 0.00 0.00 0.00 3.51
579 589 0.468029 ACACTTGAAAGCCACCCCTG 60.468 55.000 0.00 0.00 0.00 4.45
580 590 1.531602 ACTTGAAAGCCACCCCTGC 60.532 57.895 0.00 0.00 0.00 4.85
593 603 1.607467 CCCTGCCCCCAAGACAAAG 60.607 63.158 0.00 0.00 0.00 2.77
594 604 2.278330 CCTGCCCCCAAGACAAAGC 61.278 63.158 0.00 0.00 0.00 3.51
622 633 4.335584 CGCGGGGAGATCTCGCTC 62.336 72.222 31.59 23.47 46.23 5.03
657 668 0.388907 CCATCACAAAGCGCCCAAAG 60.389 55.000 2.29 0.00 0.00 2.77
659 670 1.462731 ATCACAAAGCGCCCAAAGCA 61.463 50.000 2.29 0.00 44.04 3.91
660 671 1.950630 CACAAAGCGCCCAAAGCAC 60.951 57.895 2.29 0.00 44.04 4.40
661 672 2.416678 CAAAGCGCCCAAAGCACA 59.583 55.556 2.29 0.00 44.04 4.57
662 673 1.005867 CAAAGCGCCCAAAGCACAT 60.006 52.632 2.29 0.00 44.04 3.21
663 674 1.010419 CAAAGCGCCCAAAGCACATC 61.010 55.000 2.29 0.00 44.04 3.06
664 675 1.462731 AAAGCGCCCAAAGCACATCA 61.463 50.000 2.29 0.00 44.04 3.07
665 676 1.252904 AAGCGCCCAAAGCACATCAT 61.253 50.000 2.29 0.00 44.04 2.45
666 677 1.226773 GCGCCCAAAGCACATCATC 60.227 57.895 0.00 0.00 44.04 2.92
668 679 1.434696 GCCCAAAGCACATCATCCG 59.565 57.895 0.00 0.00 42.97 4.18
669 680 1.434696 CCCAAAGCACATCATCCGC 59.565 57.895 0.00 0.00 0.00 5.54
670 681 1.063006 CCAAAGCACATCATCCGCG 59.937 57.895 0.00 0.00 0.00 6.46
671 682 1.368345 CCAAAGCACATCATCCGCGA 61.368 55.000 8.23 0.00 0.00 5.87
685 696 3.532155 GCGAGGACAGCCGAGGAT 61.532 66.667 0.00 0.00 39.96 3.24
686 697 2.725008 CGAGGACAGCCGAGGATC 59.275 66.667 0.00 0.00 39.96 3.36
716 727 2.571653 ACCGATGTTCCTCCAAGATTCA 59.428 45.455 0.00 0.00 0.00 2.57
731 742 1.162181 ATTCATGCTGCGTGATCCGG 61.162 55.000 23.83 0.00 36.94 5.14
732 743 2.512286 CATGCTGCGTGATCCGGT 60.512 61.111 16.69 0.00 36.94 5.28
735 746 3.188786 GCTGCGTGATCCGGTGAC 61.189 66.667 0.00 0.00 36.94 3.67
739 750 0.102300 TGCGTGATCCGGTGACTATG 59.898 55.000 0.00 0.00 36.94 2.23
745 756 4.608951 GTGATCCGGTGACTATGAAGTAC 58.391 47.826 0.00 0.00 35.56 2.73
747 758 4.579340 TGATCCGGTGACTATGAAGTACTC 59.421 45.833 0.00 0.00 35.56 2.59
748 759 3.959293 TCCGGTGACTATGAAGTACTCA 58.041 45.455 0.00 0.00 35.56 3.41
749 760 3.693085 TCCGGTGACTATGAAGTACTCAC 59.307 47.826 0.00 0.00 36.69 3.51
750 761 3.695060 CCGGTGACTATGAAGTACTCACT 59.305 47.826 0.00 0.00 36.69 3.41
751 762 4.201930 CCGGTGACTATGAAGTACTCACTC 60.202 50.000 0.00 0.00 36.69 3.51
767 778 1.082104 CTCCGCTGCAAAAACGTCC 60.082 57.895 0.00 0.00 0.00 4.79
768 779 1.507141 CTCCGCTGCAAAAACGTCCT 61.507 55.000 0.00 0.00 0.00 3.85
773 784 1.202245 GCTGCAAAAACGTCCTTGTGA 60.202 47.619 10.30 0.00 0.00 3.58
782 793 1.557443 CGTCCTTGTGAACGTCAGCC 61.557 60.000 0.00 0.00 0.00 4.85
794 805 5.008811 GTGAACGTCAGCCAGATAGTAGTAT 59.991 44.000 0.00 0.00 0.00 2.12
796 807 6.096423 TGAACGTCAGCCAGATAGTAGTATTT 59.904 38.462 0.00 0.00 0.00 1.40
797 808 6.074544 ACGTCAGCCAGATAGTAGTATTTC 57.925 41.667 0.00 0.00 0.00 2.17
812 826 2.851263 ATTTCCGTAGACAAGTGCCA 57.149 45.000 0.00 0.00 0.00 4.92
840 857 0.528466 CACCAGGTCATCGATCCGTG 60.528 60.000 0.00 1.09 0.00 4.94
841 858 0.970937 ACCAGGTCATCGATCCGTGT 60.971 55.000 0.00 0.00 0.00 4.49
846 863 1.134367 GGTCATCGATCCGTGTCTTGA 59.866 52.381 0.00 0.00 0.00 3.02
867 885 1.296392 CTCCCACACCAATCAGCGA 59.704 57.895 0.00 0.00 0.00 4.93
906 924 1.226262 GGCAATCCCGAAGCCCTAA 59.774 57.895 0.00 0.00 42.58 2.69
914 932 1.399714 CCGAAGCCCTAATTTTCCCC 58.600 55.000 0.00 0.00 0.00 4.81
950 969 2.078914 CCGAGTCGGTCACGTTTCG 61.079 63.158 23.83 0.00 42.73 3.46
955 974 2.660552 CGGTCACGTTTCGCCTGT 60.661 61.111 0.00 0.00 34.81 4.00
957 976 1.885850 GGTCACGTTTCGCCTGTGT 60.886 57.895 0.00 0.00 35.20 3.72
1022 1052 2.657237 CCAGCCGTTCGAGTTCCT 59.343 61.111 0.00 0.00 0.00 3.36
1153 1203 4.144727 TCGCCTCCTCCCCTCTCC 62.145 72.222 0.00 0.00 0.00 3.71
1166 1216 0.692756 CCTCTCCCCTTCTTCCCCTC 60.693 65.000 0.00 0.00 0.00 4.30
1167 1217 0.341609 CTCTCCCCTTCTTCCCCTCT 59.658 60.000 0.00 0.00 0.00 3.69
1168 1218 0.800239 TCTCCCCTTCTTCCCCTCTT 59.200 55.000 0.00 0.00 0.00 2.85
1169 1219 1.208706 CTCCCCTTCTTCCCCTCTTC 58.791 60.000 0.00 0.00 0.00 2.87
1170 1220 0.253207 TCCCCTTCTTCCCCTCTTCC 60.253 60.000 0.00 0.00 0.00 3.46
1171 1221 1.627297 CCCCTTCTTCCCCTCTTCCG 61.627 65.000 0.00 0.00 0.00 4.30
1172 1222 0.617820 CCCTTCTTCCCCTCTTCCGA 60.618 60.000 0.00 0.00 0.00 4.55
1173 1223 1.501582 CCTTCTTCCCCTCTTCCGAT 58.498 55.000 0.00 0.00 0.00 4.18
1174 1224 1.414550 CCTTCTTCCCCTCTTCCGATC 59.585 57.143 0.00 0.00 0.00 3.69
1175 1225 2.111384 CTTCTTCCCCTCTTCCGATCA 58.889 52.381 0.00 0.00 0.00 2.92
1176 1226 1.781786 TCTTCCCCTCTTCCGATCAG 58.218 55.000 0.00 0.00 0.00 2.90
1177 1227 1.007238 TCTTCCCCTCTTCCGATCAGT 59.993 52.381 0.00 0.00 0.00 3.41
1178 1228 1.834263 CTTCCCCTCTTCCGATCAGTT 59.166 52.381 0.00 0.00 0.00 3.16
1179 1229 1.195115 TCCCCTCTTCCGATCAGTTG 58.805 55.000 0.00 0.00 0.00 3.16
1180 1230 0.905357 CCCCTCTTCCGATCAGTTGT 59.095 55.000 0.00 0.00 0.00 3.32
1181 1231 1.279271 CCCCTCTTCCGATCAGTTGTT 59.721 52.381 0.00 0.00 0.00 2.83
1182 1232 2.350522 CCCTCTTCCGATCAGTTGTTG 58.649 52.381 0.00 0.00 0.00 3.33
1183 1233 2.289694 CCCTCTTCCGATCAGTTGTTGT 60.290 50.000 0.00 0.00 0.00 3.32
1184 1234 3.403038 CCTCTTCCGATCAGTTGTTGTT 58.597 45.455 0.00 0.00 0.00 2.83
1185 1235 3.815401 CCTCTTCCGATCAGTTGTTGTTT 59.185 43.478 0.00 0.00 0.00 2.83
1186 1236 4.083802 CCTCTTCCGATCAGTTGTTGTTTC 60.084 45.833 0.00 0.00 0.00 2.78
1187 1237 3.493129 TCTTCCGATCAGTTGTTGTTTCG 59.507 43.478 0.00 0.00 35.10 3.46
1188 1238 1.529438 TCCGATCAGTTGTTGTTTCGC 59.471 47.619 0.00 0.00 34.48 4.70
1189 1239 1.531149 CCGATCAGTTGTTGTTTCGCT 59.469 47.619 0.00 0.00 34.48 4.93
1190 1240 2.411547 CCGATCAGTTGTTGTTTCGCTC 60.412 50.000 0.00 0.00 34.48 5.03
1199 1273 2.066262 GTTGTTTCGCTCTTCCGATCA 58.934 47.619 0.00 0.00 37.06 2.92
1216 1290 0.937304 TCAGTTGCTGTTTCGCTGAC 59.063 50.000 0.00 0.00 32.09 3.51
1339 1418 2.295909 GCTGAGAGAGATCCGCAAGTAT 59.704 50.000 0.00 0.00 30.60 2.12
1408 1487 3.983494 CGGGAGATCGCGCAGGAT 61.983 66.667 8.75 2.11 44.83 3.24
1501 1580 0.250513 GGCTCTTCGAGGACACCAAT 59.749 55.000 6.91 0.00 0.00 3.16
1656 1752 7.606456 AGTTGATTCGCTTCTGGTTTTTAGATA 59.394 33.333 0.00 0.00 0.00 1.98
1659 1755 5.734855 TCGCTTCTGGTTTTTAGATATGC 57.265 39.130 0.00 0.00 0.00 3.14
1664 1760 6.678900 GCTTCTGGTTTTTAGATATGCCACTG 60.679 42.308 0.00 0.00 0.00 3.66
1671 1767 4.955811 TTAGATATGCCACTGGATCGTT 57.044 40.909 0.00 0.00 0.00 3.85
1678 1774 3.792401 TGCCACTGGATCGTTATAAGTG 58.208 45.455 0.00 0.00 38.36 3.16
1807 1948 9.836864 ATATCAGTACTGAGCAATTGTGAAATA 57.163 29.630 28.29 12.83 43.61 1.40
1833 1974 4.461405 CTTTCTGTTCTTTGATGCTGTCG 58.539 43.478 0.00 0.00 0.00 4.35
1836 1977 4.627058 TCTGTTCTTTGATGCTGTCGTTA 58.373 39.130 0.00 0.00 0.00 3.18
1844 1985 6.260050 TCTTTGATGCTGTCGTTAGTTTTTCT 59.740 34.615 0.00 0.00 0.00 2.52
1845 1986 5.342806 TGATGCTGTCGTTAGTTTTTCTG 57.657 39.130 0.00 0.00 0.00 3.02
1859 2000 6.647212 AGTTTTTCTGCTTTGCTTTGTAAC 57.353 33.333 0.00 0.00 0.00 2.50
1860 2001 6.398095 AGTTTTTCTGCTTTGCTTTGTAACT 58.602 32.000 0.00 0.00 0.00 2.24
1861 2002 6.311200 AGTTTTTCTGCTTTGCTTTGTAACTG 59.689 34.615 0.00 0.00 0.00 3.16
1862 2003 3.988379 TCTGCTTTGCTTTGTAACTGG 57.012 42.857 0.00 0.00 0.00 4.00
1863 2004 2.622942 TCTGCTTTGCTTTGTAACTGGG 59.377 45.455 0.00 0.00 0.00 4.45
1864 2005 2.362077 CTGCTTTGCTTTGTAACTGGGT 59.638 45.455 0.00 0.00 0.00 4.51
1865 2006 2.100584 TGCTTTGCTTTGTAACTGGGTG 59.899 45.455 0.00 0.00 0.00 4.61
1866 2007 2.100749 GCTTTGCTTTGTAACTGGGTGT 59.899 45.455 0.00 0.00 0.00 4.16
1867 2008 3.430236 GCTTTGCTTTGTAACTGGGTGTT 60.430 43.478 0.00 0.00 42.31 3.32
1868 2009 3.791973 TTGCTTTGTAACTGGGTGTTG 57.208 42.857 0.00 0.00 39.55 3.33
1869 2010 2.729194 TGCTTTGTAACTGGGTGTTGT 58.271 42.857 0.00 0.00 39.55 3.32
1870 2011 2.685897 TGCTTTGTAACTGGGTGTTGTC 59.314 45.455 0.00 0.00 39.55 3.18
1871 2012 2.949644 GCTTTGTAACTGGGTGTTGTCT 59.050 45.455 0.00 0.00 39.55 3.41
1872 2013 3.243068 GCTTTGTAACTGGGTGTTGTCTG 60.243 47.826 0.00 0.00 39.55 3.51
1873 2014 2.631160 TGTAACTGGGTGTTGTCTGG 57.369 50.000 0.00 0.00 39.55 3.86
1874 2015 1.841277 TGTAACTGGGTGTTGTCTGGT 59.159 47.619 0.00 0.00 39.55 4.00
1875 2016 2.158871 TGTAACTGGGTGTTGTCTGGTC 60.159 50.000 0.00 0.00 39.55 4.02
1876 2017 0.916086 AACTGGGTGTTGTCTGGTCA 59.084 50.000 0.00 0.00 37.52 4.02
1877 2018 0.916086 ACTGGGTGTTGTCTGGTCAA 59.084 50.000 0.00 0.00 0.00 3.18
1878 2019 1.494721 ACTGGGTGTTGTCTGGTCAAT 59.505 47.619 0.00 0.00 0.00 2.57
1879 2020 1.881973 CTGGGTGTTGTCTGGTCAATG 59.118 52.381 0.00 0.00 0.00 2.82
1880 2021 1.492599 TGGGTGTTGTCTGGTCAATGA 59.507 47.619 0.00 0.00 0.00 2.57
1881 2022 2.092158 TGGGTGTTGTCTGGTCAATGAA 60.092 45.455 0.00 0.00 0.00 2.57
1882 2023 2.554032 GGGTGTTGTCTGGTCAATGAAG 59.446 50.000 0.00 0.00 0.00 3.02
1883 2024 2.554032 GGTGTTGTCTGGTCAATGAAGG 59.446 50.000 0.00 0.00 0.00 3.46
1884 2025 3.476552 GTGTTGTCTGGTCAATGAAGGA 58.523 45.455 0.00 0.00 0.00 3.36
1885 2026 4.074970 GTGTTGTCTGGTCAATGAAGGAT 58.925 43.478 0.00 0.00 0.00 3.24
1886 2027 4.520492 GTGTTGTCTGGTCAATGAAGGATT 59.480 41.667 0.00 0.00 0.00 3.01
1887 2028 4.520111 TGTTGTCTGGTCAATGAAGGATTG 59.480 41.667 0.00 0.00 42.68 2.67
1888 2029 4.371624 TGTCTGGTCAATGAAGGATTGT 57.628 40.909 0.00 0.00 42.06 2.71
1889 2030 4.728772 TGTCTGGTCAATGAAGGATTGTT 58.271 39.130 0.00 0.00 42.06 2.83
1890 2031 4.520111 TGTCTGGTCAATGAAGGATTGTTG 59.480 41.667 0.00 0.00 42.06 3.33
1891 2032 4.520492 GTCTGGTCAATGAAGGATTGTTGT 59.480 41.667 0.00 0.00 42.06 3.32
1892 2033 4.761739 TCTGGTCAATGAAGGATTGTTGTC 59.238 41.667 0.00 0.00 42.06 3.18
1893 2034 3.501828 TGGTCAATGAAGGATTGTTGTCG 59.498 43.478 0.00 0.00 42.06 4.35
1894 2035 3.119849 GGTCAATGAAGGATTGTTGTCGG 60.120 47.826 0.00 0.00 42.06 4.79
1895 2036 3.081061 TCAATGAAGGATTGTTGTCGGG 58.919 45.455 0.00 0.00 42.06 5.14
1896 2037 2.128771 ATGAAGGATTGTTGTCGGGG 57.871 50.000 0.00 0.00 0.00 5.73
1897 2038 0.608035 TGAAGGATTGTTGTCGGGGC 60.608 55.000 0.00 0.00 0.00 5.80
1898 2039 1.304134 AAGGATTGTTGTCGGGGCC 60.304 57.895 0.00 0.00 0.00 5.80
1899 2040 1.789576 AAGGATTGTTGTCGGGGCCT 61.790 55.000 0.84 0.00 0.00 5.19
1900 2041 1.749258 GGATTGTTGTCGGGGCCTC 60.749 63.158 0.84 0.00 0.00 4.70
1901 2042 1.299976 GATTGTTGTCGGGGCCTCT 59.700 57.895 0.00 0.00 0.00 3.69
1902 2043 1.002134 ATTGTTGTCGGGGCCTCTG 60.002 57.895 0.00 0.00 0.00 3.35
1903 2044 2.484287 ATTGTTGTCGGGGCCTCTGG 62.484 60.000 0.00 0.00 0.00 3.86
1904 2045 4.410400 GTTGTCGGGGCCTCTGGG 62.410 72.222 0.00 0.00 0.00 4.45
1908 2049 4.431524 TCGGGGCCTCTGGGGATT 62.432 66.667 0.00 0.00 37.23 3.01
1909 2050 3.420482 CGGGGCCTCTGGGGATTT 61.420 66.667 0.00 0.00 37.23 2.17
1910 2051 2.996330 CGGGGCCTCTGGGGATTTT 61.996 63.158 0.00 0.00 37.23 1.82
1911 2052 1.641552 CGGGGCCTCTGGGGATTTTA 61.642 60.000 0.00 0.00 37.23 1.52
1912 2053 0.186143 GGGGCCTCTGGGGATTTTAG 59.814 60.000 0.84 0.00 37.23 1.85
1913 2054 0.186143 GGGCCTCTGGGGATTTTAGG 59.814 60.000 0.84 0.00 37.23 2.69
1914 2055 0.186143 GGCCTCTGGGGATTTTAGGG 59.814 60.000 0.00 0.00 37.23 3.53
1915 2056 0.927029 GCCTCTGGGGATTTTAGGGT 59.073 55.000 0.00 0.00 37.23 4.34
1916 2057 1.410224 GCCTCTGGGGATTTTAGGGTG 60.410 57.143 0.00 0.00 37.23 4.61
1917 2058 1.923148 CCTCTGGGGATTTTAGGGTGT 59.077 52.381 0.00 0.00 37.23 4.16
1918 2059 2.311841 CCTCTGGGGATTTTAGGGTGTT 59.688 50.000 0.00 0.00 37.23 3.32
1919 2060 3.356290 CTCTGGGGATTTTAGGGTGTTG 58.644 50.000 0.00 0.00 0.00 3.33
1920 2061 2.719705 TCTGGGGATTTTAGGGTGTTGT 59.280 45.455 0.00 0.00 0.00 3.32
1921 2062 2.825532 CTGGGGATTTTAGGGTGTTGTG 59.174 50.000 0.00 0.00 0.00 3.33
1922 2063 2.447429 TGGGGATTTTAGGGTGTTGTGA 59.553 45.455 0.00 0.00 0.00 3.58
1923 2064 3.076785 TGGGGATTTTAGGGTGTTGTGAT 59.923 43.478 0.00 0.00 0.00 3.06
1924 2065 4.292571 TGGGGATTTTAGGGTGTTGTGATA 59.707 41.667 0.00 0.00 0.00 2.15
1925 2066 5.222358 TGGGGATTTTAGGGTGTTGTGATAA 60.222 40.000 0.00 0.00 0.00 1.75
1926 2067 5.897250 GGGGATTTTAGGGTGTTGTGATAAT 59.103 40.000 0.00 0.00 0.00 1.28
1927 2068 6.183360 GGGGATTTTAGGGTGTTGTGATAATG 60.183 42.308 0.00 0.00 0.00 1.90
1928 2069 6.379988 GGGATTTTAGGGTGTTGTGATAATGT 59.620 38.462 0.00 0.00 0.00 2.71
1929 2070 7.257722 GGATTTTAGGGTGTTGTGATAATGTG 58.742 38.462 0.00 0.00 0.00 3.21
1930 2071 7.122055 GGATTTTAGGGTGTTGTGATAATGTGA 59.878 37.037 0.00 0.00 0.00 3.58
1931 2072 7.825331 TTTTAGGGTGTTGTGATAATGTGAA 57.175 32.000 0.00 0.00 0.00 3.18
1932 2073 8.415950 TTTTAGGGTGTTGTGATAATGTGAAT 57.584 30.769 0.00 0.00 0.00 2.57
1933 2074 8.415950 TTTAGGGTGTTGTGATAATGTGAATT 57.584 30.769 0.00 0.00 0.00 2.17
1934 2075 6.515272 AGGGTGTTGTGATAATGTGAATTC 57.485 37.500 0.00 0.00 0.00 2.17
1935 2076 5.418840 AGGGTGTTGTGATAATGTGAATTCC 59.581 40.000 2.27 0.00 0.00 3.01
1936 2077 5.184864 GGGTGTTGTGATAATGTGAATTCCA 59.815 40.000 2.27 0.97 0.00 3.53
1937 2078 6.092748 GGTGTTGTGATAATGTGAATTCCAC 58.907 40.000 2.27 2.61 45.88 4.02
1938 2079 6.071952 GGTGTTGTGATAATGTGAATTCCACT 60.072 38.462 2.27 0.00 45.86 4.00
1939 2080 7.370383 GTGTTGTGATAATGTGAATTCCACTT 58.630 34.615 2.27 0.00 45.86 3.16
1940 2081 7.867403 GTGTTGTGATAATGTGAATTCCACTTT 59.133 33.333 2.27 8.26 45.86 2.66
1941 2082 8.420222 TGTTGTGATAATGTGAATTCCACTTTT 58.580 29.630 2.27 3.45 45.86 2.27
1942 2083 9.906660 GTTGTGATAATGTGAATTCCACTTTTA 57.093 29.630 2.27 5.20 45.86 1.52
1943 2084 9.906660 TTGTGATAATGTGAATTCCACTTTTAC 57.093 29.630 2.27 7.01 45.86 2.01
1944 2085 8.519526 TGTGATAATGTGAATTCCACTTTTACC 58.480 33.333 2.27 0.00 45.86 2.85
1945 2086 7.973944 GTGATAATGTGAATTCCACTTTTACCC 59.026 37.037 2.27 2.78 45.86 3.69
1946 2087 7.893302 TGATAATGTGAATTCCACTTTTACCCT 59.107 33.333 2.27 0.00 45.86 4.34
1947 2088 9.403583 GATAATGTGAATTCCACTTTTACCCTA 57.596 33.333 2.27 0.00 45.86 3.53
1948 2089 7.703058 AATGTGAATTCCACTTTTACCCTAG 57.297 36.000 2.27 0.00 45.86 3.02
1949 2090 5.007682 TGTGAATTCCACTTTTACCCTAGC 58.992 41.667 2.27 0.00 45.86 3.42
1950 2091 5.222048 TGTGAATTCCACTTTTACCCTAGCT 60.222 40.000 2.27 0.00 45.86 3.32
1951 2092 5.710567 GTGAATTCCACTTTTACCCTAGCTT 59.289 40.000 2.27 0.00 42.44 3.74
1952 2093 6.208797 GTGAATTCCACTTTTACCCTAGCTTT 59.791 38.462 2.27 0.00 42.44 3.51
1953 2094 6.208599 TGAATTCCACTTTTACCCTAGCTTTG 59.791 38.462 2.27 0.00 0.00 2.77
1954 2095 3.418047 TCCACTTTTACCCTAGCTTTGC 58.582 45.455 0.00 0.00 0.00 3.68
1955 2096 2.161609 CCACTTTTACCCTAGCTTTGCG 59.838 50.000 0.00 0.00 0.00 4.85
1956 2097 2.812011 CACTTTTACCCTAGCTTTGCGT 59.188 45.455 0.00 0.00 0.00 5.24
1957 2098 3.252458 CACTTTTACCCTAGCTTTGCGTT 59.748 43.478 0.00 0.00 0.00 4.84
1958 2099 3.887110 ACTTTTACCCTAGCTTTGCGTTT 59.113 39.130 0.00 0.00 0.00 3.60
1959 2100 5.049267 CACTTTTACCCTAGCTTTGCGTTTA 60.049 40.000 0.00 0.00 0.00 2.01
1960 2101 5.708697 ACTTTTACCCTAGCTTTGCGTTTAT 59.291 36.000 0.00 0.00 0.00 1.40
1961 2102 6.208007 ACTTTTACCCTAGCTTTGCGTTTATT 59.792 34.615 0.00 0.00 0.00 1.40
1962 2103 6.578163 TTTACCCTAGCTTTGCGTTTATTT 57.422 33.333 0.00 0.00 0.00 1.40
1963 2104 7.684937 TTTACCCTAGCTTTGCGTTTATTTA 57.315 32.000 0.00 0.00 0.00 1.40
1964 2105 7.868906 TTACCCTAGCTTTGCGTTTATTTAT 57.131 32.000 0.00 0.00 0.00 1.40
1965 2106 8.961294 TTACCCTAGCTTTGCGTTTATTTATA 57.039 30.769 0.00 0.00 0.00 0.98
1966 2107 7.868906 ACCCTAGCTTTGCGTTTATTTATAA 57.131 32.000 0.00 0.00 0.00 0.98
1967 2108 8.459911 ACCCTAGCTTTGCGTTTATTTATAAT 57.540 30.769 0.00 0.00 0.00 1.28
1968 2109 9.563748 ACCCTAGCTTTGCGTTTATTTATAATA 57.436 29.630 0.00 0.00 0.00 0.98
2460 2601 3.301274 GTCTGCAGGGGATTACTAGAGT 58.699 50.000 15.13 0.00 0.00 3.24
2461 2602 3.707102 GTCTGCAGGGGATTACTAGAGTT 59.293 47.826 15.13 0.00 0.00 3.01
2462 2603 4.162509 GTCTGCAGGGGATTACTAGAGTTT 59.837 45.833 15.13 0.00 0.00 2.66
2463 2604 4.783227 TCTGCAGGGGATTACTAGAGTTTT 59.217 41.667 15.13 0.00 0.00 2.43
2464 2605 5.250774 TCTGCAGGGGATTACTAGAGTTTTT 59.749 40.000 15.13 0.00 0.00 1.94
2465 2606 6.442564 TCTGCAGGGGATTACTAGAGTTTTTA 59.557 38.462 15.13 0.00 0.00 1.52
2466 2607 7.023171 TGCAGGGGATTACTAGAGTTTTTAA 57.977 36.000 0.00 0.00 0.00 1.52
2467 2608 7.639378 TGCAGGGGATTACTAGAGTTTTTAAT 58.361 34.615 0.00 0.00 0.00 1.40
2468 2609 8.113462 TGCAGGGGATTACTAGAGTTTTTAATT 58.887 33.333 0.00 0.00 0.00 1.40
2469 2610 8.967918 GCAGGGGATTACTAGAGTTTTTAATTT 58.032 33.333 0.00 0.00 0.00 1.82
2471 2612 9.392259 AGGGGATTACTAGAGTTTTTAATTTCG 57.608 33.333 0.00 0.00 0.00 3.46
2472 2613 8.618677 GGGGATTACTAGAGTTTTTAATTTCGG 58.381 37.037 0.00 0.00 0.00 4.30
2473 2614 8.127327 GGGATTACTAGAGTTTTTAATTTCGGC 58.873 37.037 0.00 0.00 0.00 5.54
2474 2615 8.127327 GGATTACTAGAGTTTTTAATTTCGGCC 58.873 37.037 0.00 0.00 0.00 6.13
2475 2616 7.982761 TTACTAGAGTTTTTAATTTCGGCCA 57.017 32.000 2.24 0.00 0.00 5.36
2476 2617 8.570068 TTACTAGAGTTTTTAATTTCGGCCAT 57.430 30.769 2.24 0.00 0.00 4.40
2477 2618 7.085052 ACTAGAGTTTTTAATTTCGGCCATC 57.915 36.000 2.24 0.00 0.00 3.51
2478 2619 6.884836 ACTAGAGTTTTTAATTTCGGCCATCT 59.115 34.615 2.24 0.00 0.00 2.90
2479 2620 6.196079 AGAGTTTTTAATTTCGGCCATCTC 57.804 37.500 2.24 0.00 0.00 2.75
2480 2621 5.946377 AGAGTTTTTAATTTCGGCCATCTCT 59.054 36.000 2.24 0.00 0.00 3.10
2481 2622 6.434340 AGAGTTTTTAATTTCGGCCATCTCTT 59.566 34.615 2.24 0.00 0.00 2.85
2482 2623 6.993079 AGTTTTTAATTTCGGCCATCTCTTT 58.007 32.000 2.24 0.00 0.00 2.52
2483 2624 7.441836 AGTTTTTAATTTCGGCCATCTCTTTT 58.558 30.769 2.24 0.00 0.00 2.27
2484 2625 7.384932 AGTTTTTAATTTCGGCCATCTCTTTTG 59.615 33.333 2.24 0.00 0.00 2.44
2485 2626 3.874392 AATTTCGGCCATCTCTTTTGG 57.126 42.857 2.24 0.00 37.31 3.28
2486 2627 2.286365 TTTCGGCCATCTCTTTTGGT 57.714 45.000 2.24 0.00 36.57 3.67
2487 2628 3.426787 TTTCGGCCATCTCTTTTGGTA 57.573 42.857 2.24 0.00 36.57 3.25
2488 2629 3.426787 TTCGGCCATCTCTTTTGGTAA 57.573 42.857 2.24 0.00 36.57 2.85
2489 2630 3.426787 TCGGCCATCTCTTTTGGTAAA 57.573 42.857 2.24 0.00 36.57 2.01
2490 2631 3.757270 TCGGCCATCTCTTTTGGTAAAA 58.243 40.909 2.24 0.00 36.57 1.52
2491 2632 4.145807 TCGGCCATCTCTTTTGGTAAAAA 58.854 39.130 2.24 0.00 36.57 1.94
2510 2651 4.948341 AAAAATCGGCCCAAGTTAAGTT 57.052 36.364 0.00 0.00 0.00 2.66
2512 2653 6.599356 AAAAATCGGCCCAAGTTAAGTTAT 57.401 33.333 0.00 0.00 0.00 1.89
2513 2654 6.599356 AAAATCGGCCCAAGTTAAGTTATT 57.401 33.333 0.00 0.00 0.00 1.40
2514 2655 6.599356 AAATCGGCCCAAGTTAAGTTATTT 57.401 33.333 0.00 0.00 0.00 1.40
2515 2656 6.599356 AATCGGCCCAAGTTAAGTTATTTT 57.401 33.333 0.00 0.00 0.00 1.82
2516 2657 5.379732 TCGGCCCAAGTTAAGTTATTTTG 57.620 39.130 0.00 0.00 0.00 2.44
2517 2658 3.924073 CGGCCCAAGTTAAGTTATTTTGC 59.076 43.478 0.00 0.00 0.00 3.68
2518 2659 4.250464 GGCCCAAGTTAAGTTATTTTGCC 58.750 43.478 0.00 0.83 0.00 4.52
2519 2660 4.250464 GCCCAAGTTAAGTTATTTTGCCC 58.750 43.478 0.00 0.00 0.00 5.36
2520 2661 4.490743 CCCAAGTTAAGTTATTTTGCCCG 58.509 43.478 0.00 0.00 0.00 6.13
2521 2662 4.490743 CCAAGTTAAGTTATTTTGCCCGG 58.509 43.478 0.00 0.00 0.00 5.73
2522 2663 3.861276 AGTTAAGTTATTTTGCCCGGC 57.139 42.857 1.04 1.04 0.00 6.13
2523 2664 2.494471 AGTTAAGTTATTTTGCCCGGCC 59.506 45.455 7.03 0.00 0.00 6.13
2524 2665 1.476477 TAAGTTATTTTGCCCGGCCC 58.524 50.000 7.03 0.00 0.00 5.80
2525 2666 0.543174 AAGTTATTTTGCCCGGCCCA 60.543 50.000 7.03 0.00 0.00 5.36
2526 2667 0.543174 AGTTATTTTGCCCGGCCCAA 60.543 50.000 7.03 0.00 0.00 4.12
2527 2668 0.390603 GTTATTTTGCCCGGCCCAAC 60.391 55.000 7.03 0.25 0.00 3.77
2528 2669 1.878656 TTATTTTGCCCGGCCCAACG 61.879 55.000 7.03 0.00 0.00 4.10
2535 2676 4.323477 CCGGCCCAACGTCAGGAA 62.323 66.667 7.96 0.00 0.00 3.36
2536 2677 2.742372 CGGCCCAACGTCAGGAAG 60.742 66.667 7.96 0.00 0.00 3.46
2537 2678 2.359975 GGCCCAACGTCAGGAAGG 60.360 66.667 7.96 0.00 0.00 3.46
2538 2679 2.430367 GCCCAACGTCAGGAAGGT 59.570 61.111 7.96 0.00 0.00 3.50
2539 2680 1.228154 GCCCAACGTCAGGAAGGTT 60.228 57.895 7.96 0.00 36.43 3.50
2547 2688 6.737254 CAACGTCAGGAAGGTTGTTATTAT 57.263 37.500 0.00 0.00 44.77 1.28
2548 2689 6.542852 CAACGTCAGGAAGGTTGTTATTATG 58.457 40.000 0.00 0.00 44.77 1.90
2549 2690 5.183228 ACGTCAGGAAGGTTGTTATTATGG 58.817 41.667 0.00 0.00 0.00 2.74
2550 2691 5.183228 CGTCAGGAAGGTTGTTATTATGGT 58.817 41.667 0.00 0.00 0.00 3.55
2551 2692 5.646360 CGTCAGGAAGGTTGTTATTATGGTT 59.354 40.000 0.00 0.00 0.00 3.67
2552 2693 6.403200 CGTCAGGAAGGTTGTTATTATGGTTG 60.403 42.308 0.00 0.00 0.00 3.77
2553 2694 5.949354 TCAGGAAGGTTGTTATTATGGTTGG 59.051 40.000 0.00 0.00 0.00 3.77
2554 2695 5.127031 CAGGAAGGTTGTTATTATGGTTGGG 59.873 44.000 0.00 0.00 0.00 4.12
2555 2696 4.142026 GGAAGGTTGTTATTATGGTTGGGC 60.142 45.833 0.00 0.00 0.00 5.36
2556 2697 4.054359 AGGTTGTTATTATGGTTGGGCA 57.946 40.909 0.00 0.00 0.00 5.36
2557 2698 4.421131 AGGTTGTTATTATGGTTGGGCAA 58.579 39.130 0.00 0.00 0.00 4.52
2558 2699 4.841246 AGGTTGTTATTATGGTTGGGCAAA 59.159 37.500 0.00 0.00 0.00 3.68
2559 2700 5.308237 AGGTTGTTATTATGGTTGGGCAAAA 59.692 36.000 0.00 0.00 0.00 2.44
2560 2701 5.410132 GGTTGTTATTATGGTTGGGCAAAAC 59.590 40.000 0.00 0.00 0.00 2.43
2570 2711 3.737850 GTTGGGCAAAACCATCAATTCA 58.262 40.909 0.00 0.00 40.91 2.57
2571 2712 4.133078 GTTGGGCAAAACCATCAATTCAA 58.867 39.130 0.00 0.00 40.91 2.69
2572 2713 3.737850 TGGGCAAAACCATCAATTCAAC 58.262 40.909 0.00 0.00 42.05 3.18
2573 2714 3.390639 TGGGCAAAACCATCAATTCAACT 59.609 39.130 0.00 0.00 42.05 3.16
2574 2715 3.996363 GGGCAAAACCATCAATTCAACTC 59.004 43.478 0.00 0.00 42.05 3.01
2575 2716 3.996363 GGCAAAACCATCAATTCAACTCC 59.004 43.478 0.00 0.00 38.86 3.85
2576 2717 3.996363 GCAAAACCATCAATTCAACTCCC 59.004 43.478 0.00 0.00 0.00 4.30
2577 2718 4.262592 GCAAAACCATCAATTCAACTCCCT 60.263 41.667 0.00 0.00 0.00 4.20
2578 2719 5.047377 GCAAAACCATCAATTCAACTCCCTA 60.047 40.000 0.00 0.00 0.00 3.53
2579 2720 6.518200 GCAAAACCATCAATTCAACTCCCTAA 60.518 38.462 0.00 0.00 0.00 2.69
2580 2721 6.590234 AAACCATCAATTCAACTCCCTAAC 57.410 37.500 0.00 0.00 0.00 2.34
2581 2722 4.600062 ACCATCAATTCAACTCCCTAACC 58.400 43.478 0.00 0.00 0.00 2.85
2582 2723 3.954258 CCATCAATTCAACTCCCTAACCC 59.046 47.826 0.00 0.00 0.00 4.11
2583 2724 4.325344 CCATCAATTCAACTCCCTAACCCT 60.325 45.833 0.00 0.00 0.00 4.34
2584 2725 5.104109 CCATCAATTCAACTCCCTAACCCTA 60.104 44.000 0.00 0.00 0.00 3.53
2585 2726 6.423182 CATCAATTCAACTCCCTAACCCTAA 58.577 40.000 0.00 0.00 0.00 2.69
2586 2727 6.457159 TCAATTCAACTCCCTAACCCTAAA 57.543 37.500 0.00 0.00 0.00 1.85
2587 2728 6.243148 TCAATTCAACTCCCTAACCCTAAAC 58.757 40.000 0.00 0.00 0.00 2.01
2588 2729 5.853572 ATTCAACTCCCTAACCCTAAACA 57.146 39.130 0.00 0.00 0.00 2.83
2589 2730 5.853572 TTCAACTCCCTAACCCTAAACAT 57.146 39.130 0.00 0.00 0.00 2.71
2590 2731 6.956102 TTCAACTCCCTAACCCTAAACATA 57.044 37.500 0.00 0.00 0.00 2.29
2591 2732 7.519347 TTCAACTCCCTAACCCTAAACATAT 57.481 36.000 0.00 0.00 0.00 1.78
2592 2733 7.133133 TCAACTCCCTAACCCTAAACATATC 57.867 40.000 0.00 0.00 0.00 1.63
2593 2734 6.674861 TCAACTCCCTAACCCTAAACATATCA 59.325 38.462 0.00 0.00 0.00 2.15
2594 2735 7.349859 TCAACTCCCTAACCCTAAACATATCAT 59.650 37.037 0.00 0.00 0.00 2.45
2595 2736 7.707467 ACTCCCTAACCCTAAACATATCATT 57.293 36.000 0.00 0.00 0.00 2.57
2596 2737 8.114301 ACTCCCTAACCCTAAACATATCATTT 57.886 34.615 0.00 0.00 0.00 2.32
2597 2738 8.218488 ACTCCCTAACCCTAAACATATCATTTC 58.782 37.037 0.00 0.00 0.00 2.17
2598 2739 7.523415 TCCCTAACCCTAAACATATCATTTCC 58.477 38.462 0.00 0.00 0.00 3.13
2599 2740 7.352522 TCCCTAACCCTAAACATATCATTTCCT 59.647 37.037 0.00 0.00 0.00 3.36
2600 2741 7.665974 CCCTAACCCTAAACATATCATTTCCTC 59.334 40.741 0.00 0.00 0.00 3.71
2601 2742 8.440771 CCTAACCCTAAACATATCATTTCCTCT 58.559 37.037 0.00 0.00 0.00 3.69
2602 2743 9.277783 CTAACCCTAAACATATCATTTCCTCTG 57.722 37.037 0.00 0.00 0.00 3.35
2603 2744 6.064717 ACCCTAAACATATCATTTCCTCTGC 58.935 40.000 0.00 0.00 0.00 4.26
2604 2745 6.126361 ACCCTAAACATATCATTTCCTCTGCT 60.126 38.462 0.00 0.00 0.00 4.24
2605 2746 6.206243 CCCTAAACATATCATTTCCTCTGCTG 59.794 42.308 0.00 0.00 0.00 4.41
2606 2747 5.511234 AAACATATCATTTCCTCTGCTGC 57.489 39.130 0.00 0.00 0.00 5.25
2607 2748 4.160642 ACATATCATTTCCTCTGCTGCA 57.839 40.909 0.88 0.88 0.00 4.41
2608 2749 3.881688 ACATATCATTTCCTCTGCTGCAC 59.118 43.478 0.00 0.00 0.00 4.57
2609 2750 2.502142 ATCATTTCCTCTGCTGCACA 57.498 45.000 0.00 0.00 0.00 4.57
2610 2751 2.275134 TCATTTCCTCTGCTGCACAA 57.725 45.000 0.00 0.00 0.00 3.33
2611 2752 2.585330 TCATTTCCTCTGCTGCACAAA 58.415 42.857 0.00 0.00 0.00 2.83
2612 2753 2.555325 TCATTTCCTCTGCTGCACAAAG 59.445 45.455 0.00 0.00 0.00 2.77
2613 2754 1.321474 TTTCCTCTGCTGCACAAAGG 58.679 50.000 12.52 12.52 0.00 3.11
2614 2755 0.538057 TTCCTCTGCTGCACAAAGGG 60.538 55.000 16.60 7.76 0.00 3.95
2615 2756 2.633509 CCTCTGCTGCACAAAGGGC 61.634 63.158 0.00 0.00 0.00 5.19
2616 2757 1.900016 CTCTGCTGCACAAAGGGCA 60.900 57.895 0.00 0.00 39.32 5.36
2617 2758 2.138656 CTCTGCTGCACAAAGGGCAC 62.139 60.000 0.00 0.00 36.11 5.01
2618 2759 2.441717 TGCTGCACAAAGGGCACA 60.442 55.556 0.00 0.00 36.11 4.57
2619 2760 2.018727 CTGCTGCACAAAGGGCACAA 62.019 55.000 0.00 0.00 36.11 3.33
2620 2761 1.592400 GCTGCACAAAGGGCACAAC 60.592 57.895 0.00 0.00 36.11 3.32
2621 2762 1.299316 CTGCACAAAGGGCACAACG 60.299 57.895 0.00 0.00 36.11 4.10
2622 2763 2.658268 GCACAAAGGGCACAACGC 60.658 61.111 0.00 0.00 41.28 4.84
2623 2764 2.804167 CACAAAGGGCACAACGCA 59.196 55.556 0.00 0.00 45.17 5.24
2629 2770 4.012895 GGGCACAACGCACACGAG 62.013 66.667 0.00 0.00 46.52 4.18
2630 2771 4.666532 GGCACAACGCACACGAGC 62.667 66.667 0.00 0.00 45.17 5.03
2631 2772 3.640000 GCACAACGCACACGAGCT 61.640 61.111 0.00 0.00 43.93 4.09
2632 2773 2.546321 CACAACGCACACGAGCTC 59.454 61.111 2.73 2.73 43.93 4.09
2633 2774 2.661866 ACAACGCACACGAGCTCC 60.662 61.111 8.47 0.00 43.93 4.70
2634 2775 2.661537 CAACGCACACGAGCTCCA 60.662 61.111 8.47 0.00 43.93 3.86
2635 2776 2.661866 AACGCACACGAGCTCCAC 60.662 61.111 8.47 0.00 43.93 4.02
2636 2777 4.664677 ACGCACACGAGCTCCACC 62.665 66.667 8.47 0.00 43.93 4.61
2641 2782 3.449227 CACGAGCTCCACCGGCTA 61.449 66.667 8.47 0.00 40.40 3.93
2642 2783 2.678934 ACGAGCTCCACCGGCTAA 60.679 61.111 8.47 0.00 40.40 3.09
2643 2784 2.105128 CGAGCTCCACCGGCTAAG 59.895 66.667 8.47 0.00 40.40 2.18
2644 2785 2.501610 GAGCTCCACCGGCTAAGG 59.498 66.667 0.00 0.00 40.40 2.69
2645 2786 3.741830 GAGCTCCACCGGCTAAGGC 62.742 68.421 0.00 0.00 40.40 4.35
2653 2794 2.663188 CGGCTAAGGCGCTCCATC 60.663 66.667 7.64 0.00 45.68 3.51
2654 2795 2.825264 GGCTAAGGCGCTCCATCT 59.175 61.111 7.64 0.00 39.81 2.90
2655 2796 1.301322 GGCTAAGGCGCTCCATCTC 60.301 63.158 7.64 0.00 39.81 2.75
2656 2797 1.663074 GCTAAGGCGCTCCATCTCG 60.663 63.158 7.64 0.00 33.74 4.04
2657 2798 2.033793 CTAAGGCGCTCCATCTCGA 58.966 57.895 7.64 0.00 33.74 4.04
2658 2799 0.600557 CTAAGGCGCTCCATCTCGAT 59.399 55.000 7.64 0.00 33.74 3.59
2659 2800 0.315251 TAAGGCGCTCCATCTCGATG 59.685 55.000 7.64 0.00 38.51 3.84
2676 2817 3.972107 TGGTACACGACTGTTCACC 57.028 52.632 0.00 0.00 32.35 4.02
2677 2818 1.405872 TGGTACACGACTGTTCACCT 58.594 50.000 0.00 0.00 32.75 4.00
2678 2819 1.067974 TGGTACACGACTGTTCACCTG 59.932 52.381 0.00 0.00 32.75 4.00
2679 2820 1.068127 GGTACACGACTGTTCACCTGT 59.932 52.381 0.00 0.00 0.00 4.00
2680 2821 2.482490 GGTACACGACTGTTCACCTGTT 60.482 50.000 0.00 0.00 0.00 3.16
2681 2822 1.651987 ACACGACTGTTCACCTGTTG 58.348 50.000 0.00 0.00 33.70 3.33
2682 2823 0.304705 CACGACTGTTCACCTGTTGC 59.695 55.000 0.00 0.00 31.30 4.17
2683 2824 0.814010 ACGACTGTTCACCTGTTGCC 60.814 55.000 0.00 0.00 31.30 4.52
2684 2825 0.532862 CGACTGTTCACCTGTTGCCT 60.533 55.000 0.00 0.00 0.00 4.75
2685 2826 1.680338 GACTGTTCACCTGTTGCCTT 58.320 50.000 0.00 0.00 0.00 4.35
2686 2827 1.604278 GACTGTTCACCTGTTGCCTTC 59.396 52.381 0.00 0.00 0.00 3.46
2687 2828 0.954452 CTGTTCACCTGTTGCCTTCC 59.046 55.000 0.00 0.00 0.00 3.46
2688 2829 0.467290 TGTTCACCTGTTGCCTTCCC 60.467 55.000 0.00 0.00 0.00 3.97
2689 2830 0.467290 GTTCACCTGTTGCCTTCCCA 60.467 55.000 0.00 0.00 0.00 4.37
2690 2831 0.482446 TTCACCTGTTGCCTTCCCAT 59.518 50.000 0.00 0.00 0.00 4.00
2691 2832 0.251297 TCACCTGTTGCCTTCCCATG 60.251 55.000 0.00 0.00 0.00 3.66
2692 2833 1.607467 ACCTGTTGCCTTCCCATGC 60.607 57.895 0.00 0.00 0.00 4.06
2693 2834 2.353610 CCTGTTGCCTTCCCATGCC 61.354 63.158 0.00 0.00 0.00 4.40
2694 2835 2.283821 TGTTGCCTTCCCATGCCC 60.284 61.111 0.00 0.00 0.00 5.36
2695 2836 2.283821 GTTGCCTTCCCATGCCCA 60.284 61.111 0.00 0.00 0.00 5.36
2696 2837 2.037687 TTGCCTTCCCATGCCCAG 59.962 61.111 0.00 0.00 0.00 4.45
2697 2838 4.764771 TGCCTTCCCATGCCCAGC 62.765 66.667 0.00 0.00 0.00 4.85
2698 2839 4.453892 GCCTTCCCATGCCCAGCT 62.454 66.667 0.00 0.00 0.00 4.24
2699 2840 2.123982 CCTTCCCATGCCCAGCTC 60.124 66.667 0.00 0.00 0.00 4.09
2700 2841 2.679092 CTTCCCATGCCCAGCTCA 59.321 61.111 0.00 0.00 0.00 4.26
2701 2842 1.229359 CTTCCCATGCCCAGCTCAT 59.771 57.895 0.00 0.00 0.00 2.90
2702 2843 1.076559 TTCCCATGCCCAGCTCATG 60.077 57.895 6.86 6.86 40.60 3.07
2703 2844 1.573607 TTCCCATGCCCAGCTCATGA 61.574 55.000 13.90 0.00 42.84 3.07
2704 2845 1.528542 CCCATGCCCAGCTCATGAG 60.529 63.158 18.84 18.84 42.84 2.90
2714 2855 1.417592 GCTCATGAGCGTGTGAACG 59.582 57.895 30.64 0.00 45.29 3.95
2722 2863 2.853210 CGTGTGAACGCGCATCTT 59.147 55.556 5.73 0.00 43.06 2.40
2723 2864 1.225475 CGTGTGAACGCGCATCTTC 60.225 57.895 5.73 2.57 43.06 2.87
2724 2865 1.132640 GTGTGAACGCGCATCTTCC 59.867 57.895 5.73 0.00 36.82 3.46
2725 2866 2.379634 TGTGAACGCGCATCTTCCG 61.380 57.895 5.73 0.00 0.00 4.30
2726 2867 2.048597 TGAACGCGCATCTTCCGT 60.049 55.556 5.73 0.00 36.68 4.69
2727 2868 2.092291 TGAACGCGCATCTTCCGTC 61.092 57.895 5.73 0.00 33.59 4.79
2728 2869 3.126722 GAACGCGCATCTTCCGTCG 62.127 63.158 5.73 0.00 33.59 5.12
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 6.070596 TCAGAGATCTTTTGCCATGAACTAGA 60.071 38.462 0.00 0.00 0.00 2.43
40 41 1.066002 CCATAGCGGTGGCAAATTCAG 59.934 52.381 0.00 0.00 43.41 3.02
52 53 2.018542 TCGTTTCCTTTCCATAGCGG 57.981 50.000 0.00 0.00 0.00 5.52
54 55 4.698575 AGAGATCGTTTCCTTTCCATAGC 58.301 43.478 0.00 0.00 0.00 2.97
55 56 8.894768 AATTAGAGATCGTTTCCTTTCCATAG 57.105 34.615 0.00 0.00 0.00 2.23
56 57 8.482943 TGAATTAGAGATCGTTTCCTTTCCATA 58.517 33.333 0.00 0.00 0.00 2.74
57 58 7.338710 TGAATTAGAGATCGTTTCCTTTCCAT 58.661 34.615 0.00 0.00 0.00 3.41
58 59 6.707290 TGAATTAGAGATCGTTTCCTTTCCA 58.293 36.000 0.00 0.00 0.00 3.53
59 60 7.254932 CCATGAATTAGAGATCGTTTCCTTTCC 60.255 40.741 0.00 0.00 0.00 3.13
60 61 7.281100 ACCATGAATTAGAGATCGTTTCCTTTC 59.719 37.037 0.00 0.00 0.00 2.62
146 147 8.094798 TGTACTATGTTCTGTGTGAATTTTCC 57.905 34.615 0.00 0.00 36.99 3.13
158 159 4.032900 GCCGTGTCAATGTACTATGTTCTG 59.967 45.833 0.00 0.00 0.00 3.02
159 160 4.181578 GCCGTGTCAATGTACTATGTTCT 58.818 43.478 0.00 0.00 0.00 3.01
160 161 3.930229 TGCCGTGTCAATGTACTATGTTC 59.070 43.478 0.00 0.00 0.00 3.18
172 173 3.982475 TGCAAAATAATTGCCGTGTCAA 58.018 36.364 10.34 0.00 44.32 3.18
178 179 6.305160 GTGGAAATTTTGCAAAATAATTGCCG 59.695 34.615 31.87 0.00 44.32 5.69
186 187 6.521151 TGTTTGGTGGAAATTTTGCAAAAT 57.479 29.167 27.73 27.73 40.15 1.82
188 189 5.964958 TTGTTTGGTGGAAATTTTGCAAA 57.035 30.435 8.05 8.05 30.97 3.68
191 192 4.739228 GCATTTGTTTGGTGGAAATTTTGC 59.261 37.500 0.00 0.00 0.00 3.68
192 193 5.888105 TGCATTTGTTTGGTGGAAATTTTG 58.112 33.333 0.00 0.00 0.00 2.44
196 198 7.999450 AATTATGCATTTGTTTGGTGGAAAT 57.001 28.000 3.54 0.00 0.00 2.17
243 246 6.542735 AGTCTCTCGTTGTGCTCATATAGTTA 59.457 38.462 0.00 0.00 0.00 2.24
245 248 4.884744 AGTCTCTCGTTGTGCTCATATAGT 59.115 41.667 0.00 0.00 0.00 2.12
250 253 2.681706 CAAGTCTCTCGTTGTGCTCAT 58.318 47.619 0.00 0.00 0.00 2.90
264 267 6.051717 CCATGCATAGTTTACTAGCAAGTCT 58.948 40.000 0.00 0.00 36.73 3.24
265 268 5.237344 CCCATGCATAGTTTACTAGCAAGTC 59.763 44.000 0.00 0.00 36.73 3.01
285 295 4.141756 TGAAATCAACTTTGTTGTGCCCAT 60.142 37.500 9.78 0.00 0.00 4.00
310 320 6.421501 GCCATTCGAAATAAATGCATGAATGA 59.578 34.615 24.36 7.02 42.17 2.57
324 334 4.505808 TCATGCAATTTGCCATTCGAAAT 58.494 34.783 18.27 0.17 44.23 2.17
328 338 3.866327 TGAATCATGCAATTTGCCATTCG 59.134 39.130 18.27 3.11 44.23 3.34
354 364 2.106566 ACTTTGTTGTGCCCATGTCAA 58.893 42.857 0.00 0.00 0.00 3.18
356 366 2.100584 TCAACTTTGTTGTGCCCATGTC 59.899 45.455 9.78 0.00 0.00 3.06
385 395 5.405935 TTGCAGCTTTAGATCTGTACAGA 57.594 39.130 27.07 27.07 42.37 3.41
393 403 6.045318 TGACTAGTCATTGCAGCTTTAGATC 58.955 40.000 21.74 0.00 34.14 2.75
394 404 5.982356 TGACTAGTCATTGCAGCTTTAGAT 58.018 37.500 21.74 0.00 34.14 1.98
395 405 5.185828 TCTGACTAGTCATTGCAGCTTTAGA 59.814 40.000 25.35 11.76 39.13 2.10
396 406 5.414360 TCTGACTAGTCATTGCAGCTTTAG 58.586 41.667 25.35 9.66 39.13 1.85
397 407 5.405935 TCTGACTAGTCATTGCAGCTTTA 57.594 39.130 25.35 0.00 39.13 1.85
398 408 4.277515 TCTGACTAGTCATTGCAGCTTT 57.722 40.909 25.35 0.00 39.13 3.51
399 409 3.969287 TCTGACTAGTCATTGCAGCTT 57.031 42.857 25.35 0.00 39.13 3.74
400 410 3.969287 TTCTGACTAGTCATTGCAGCT 57.031 42.857 25.35 0.00 39.13 4.24
411 421 5.053145 GTGCCCATGTATCTTTCTGACTAG 58.947 45.833 0.00 0.00 0.00 2.57
412 422 4.469586 TGTGCCCATGTATCTTTCTGACTA 59.530 41.667 0.00 0.00 0.00 2.59
416 426 4.201657 TGATGTGCCCATGTATCTTTCTG 58.798 43.478 0.00 0.00 0.00 3.02
442 452 3.676873 GCACTACATTTGCCCCAATTCAG 60.677 47.826 0.00 0.00 33.58 3.02
450 460 1.211949 TCCCTAGCACTACATTTGCCC 59.788 52.381 0.00 0.00 41.18 5.36
475 485 7.477494 TGTCACTTCTGAATGATGCAATATTG 58.523 34.615 11.27 11.27 0.00 1.90
486 496 2.415857 GCTGCTCTGTCACTTCTGAATG 59.584 50.000 0.00 0.00 0.00 2.67
490 500 0.034476 TGGCTGCTCTGTCACTTCTG 59.966 55.000 0.00 0.00 0.00 3.02
507 517 1.640069 CACGCGCTCATTCTCATGG 59.360 57.895 5.73 0.00 0.00 3.66
508 518 1.011463 GCACGCGCTCATTCTCATG 60.011 57.895 5.73 0.00 34.30 3.07
523 533 0.307760 CGTCAAGTGGAAACAGGCAC 59.692 55.000 0.00 0.00 44.46 5.01
525 535 0.586802 GTCGTCAAGTGGAAACAGGC 59.413 55.000 0.00 0.00 44.46 4.85
528 538 3.186702 TCATGTCGTCAAGTGGAAACA 57.813 42.857 0.00 0.00 38.70 2.83
541 551 2.069273 GTTGTGGTCTCCTTCATGTCG 58.931 52.381 0.00 0.00 0.00 4.35
553 563 1.748493 TGGCTTTCAAGTGTTGTGGTC 59.252 47.619 0.00 0.00 0.00 4.02
579 589 2.574018 GGTGCTTTGTCTTGGGGGC 61.574 63.158 0.00 0.00 0.00 5.80
580 590 2.268076 CGGTGCTTTGTCTTGGGGG 61.268 63.158 0.00 0.00 0.00 5.40
628 639 0.109532 TTTGTGATGGGCGTCTGGAA 59.890 50.000 0.00 0.00 0.00 3.53
637 648 1.814772 TTTGGGCGCTTTGTGATGGG 61.815 55.000 7.64 0.00 0.00 4.00
657 668 2.106938 TCCTCGCGGATGATGTGC 59.893 61.111 6.13 0.00 33.30 4.57
659 670 1.439228 CTGTCCTCGCGGATGATGT 59.561 57.895 6.13 0.00 42.43 3.06
660 671 1.953138 GCTGTCCTCGCGGATGATG 60.953 63.158 6.13 0.00 42.43 3.07
661 672 2.419198 GCTGTCCTCGCGGATGAT 59.581 61.111 6.13 0.00 42.43 2.45
662 673 3.838271 GGCTGTCCTCGCGGATGA 61.838 66.667 6.13 0.00 42.43 2.92
668 679 3.492311 GATCCTCGGCTGTCCTCGC 62.492 68.421 0.00 0.00 0.00 5.03
669 680 2.725008 GATCCTCGGCTGTCCTCG 59.275 66.667 0.00 0.00 0.00 4.63
670 681 2.725008 CGATCCTCGGCTGTCCTC 59.275 66.667 0.00 0.00 36.00 3.71
679 690 4.587189 GTTCCCCGCCGATCCTCG 62.587 72.222 0.00 0.00 40.07 4.63
680 691 4.237207 GGTTCCCCGCCGATCCTC 62.237 72.222 0.00 0.00 0.00 3.71
694 705 3.009033 TGAATCTTGGAGGAACATCGGTT 59.991 43.478 0.00 0.00 40.76 4.44
695 706 2.571653 TGAATCTTGGAGGAACATCGGT 59.428 45.455 0.00 0.00 0.00 4.69
696 707 3.266510 TGAATCTTGGAGGAACATCGG 57.733 47.619 0.00 0.00 0.00 4.18
697 708 3.003068 GCATGAATCTTGGAGGAACATCG 59.997 47.826 0.00 0.00 0.00 3.84
698 709 4.036498 CAGCATGAATCTTGGAGGAACATC 59.964 45.833 0.00 0.00 39.69 3.06
699 710 3.952323 CAGCATGAATCTTGGAGGAACAT 59.048 43.478 0.00 0.00 39.69 2.71
700 711 3.349927 CAGCATGAATCTTGGAGGAACA 58.650 45.455 0.00 0.00 39.69 3.18
701 712 2.098770 GCAGCATGAATCTTGGAGGAAC 59.901 50.000 0.00 0.00 39.69 3.62
702 713 2.372264 GCAGCATGAATCTTGGAGGAA 58.628 47.619 0.00 0.00 39.69 3.36
703 714 1.744798 CGCAGCATGAATCTTGGAGGA 60.745 52.381 0.00 0.00 39.69 3.71
704 715 0.661552 CGCAGCATGAATCTTGGAGG 59.338 55.000 0.00 0.00 39.69 4.30
716 727 2.512286 CACCGGATCACGCAGCAT 60.512 61.111 9.46 0.00 42.52 3.79
732 743 3.377485 GCGGAGTGAGTACTTCATAGTCA 59.623 47.826 0.00 0.00 40.35 3.41
735 746 3.793801 GCAGCGGAGTGAGTACTTCATAG 60.794 52.174 0.00 0.00 38.29 2.23
739 750 0.243907 TGCAGCGGAGTGAGTACTTC 59.756 55.000 0.00 0.00 37.25 3.01
745 756 0.384725 CGTTTTTGCAGCGGAGTGAG 60.385 55.000 0.00 0.00 0.00 3.51
747 758 0.657368 GACGTTTTTGCAGCGGAGTG 60.657 55.000 0.00 0.00 0.00 3.51
748 759 1.647084 GACGTTTTTGCAGCGGAGT 59.353 52.632 0.00 0.00 0.00 3.85
749 760 1.082104 GGACGTTTTTGCAGCGGAG 60.082 57.895 0.00 0.00 0.00 4.63
750 761 1.098712 AAGGACGTTTTTGCAGCGGA 61.099 50.000 0.00 0.00 0.00 5.54
751 762 0.934436 CAAGGACGTTTTTGCAGCGG 60.934 55.000 0.00 0.00 0.00 5.52
767 778 1.800805 ATCTGGCTGACGTTCACAAG 58.199 50.000 0.00 0.00 0.00 3.16
768 779 2.299013 ACTATCTGGCTGACGTTCACAA 59.701 45.455 0.00 0.00 0.00 3.33
773 784 6.461231 GGAAATACTACTATCTGGCTGACGTT 60.461 42.308 0.00 0.00 0.00 3.99
782 793 8.838365 ACTTGTCTACGGAAATACTACTATCTG 58.162 37.037 0.00 0.00 0.00 2.90
794 805 1.689813 TCTGGCACTTGTCTACGGAAA 59.310 47.619 0.00 0.00 0.00 3.13
796 807 1.476891 GATCTGGCACTTGTCTACGGA 59.523 52.381 0.00 0.00 0.00 4.69
797 808 1.204704 TGATCTGGCACTTGTCTACGG 59.795 52.381 0.00 0.00 0.00 4.02
840 857 1.668151 GGTGTGGGAGCGTCAAGAC 60.668 63.158 0.00 0.00 0.00 3.01
841 858 1.691195 TTGGTGTGGGAGCGTCAAGA 61.691 55.000 0.00 0.00 0.00 3.02
846 863 1.003355 CTGATTGGTGTGGGAGCGT 60.003 57.895 0.00 0.00 0.00 5.07
867 885 0.900182 TCAGTGATCCACGTGCTCCT 60.900 55.000 10.91 5.90 39.64 3.69
900 918 1.108776 GTTCGGGGGAAAATTAGGGC 58.891 55.000 0.00 0.00 0.00 5.19
906 924 1.376295 CGACCGTTCGGGGGAAAAT 60.376 57.895 15.66 0.00 41.89 1.82
914 932 2.356553 TTTCCTGCGACCGTTCGG 60.357 61.111 4.06 9.81 45.98 4.30
935 953 2.355481 GGCGAAACGTGACCGACT 60.355 61.111 8.38 0.00 37.88 4.18
955 974 1.933021 CCTATATAGGTGCGGGGACA 58.067 55.000 19.30 0.00 38.69 4.02
1022 1052 3.202001 GCGCTGCGGGATTTGCTA 61.202 61.111 24.61 0.00 0.00 3.49
1141 1191 1.162951 AAGAAGGGGAGAGGGGAGGA 61.163 60.000 0.00 0.00 0.00 3.71
1148 1198 0.341609 AGAGGGGAAGAAGGGGAGAG 59.658 60.000 0.00 0.00 0.00 3.20
1153 1203 0.617820 TCGGAAGAGGGGAAGAAGGG 60.618 60.000 0.00 0.00 34.84 3.95
1166 1216 3.799035 CGAAACAACAACTGATCGGAAG 58.201 45.455 9.00 2.44 35.61 3.46
1167 1217 2.032377 GCGAAACAACAACTGATCGGAA 60.032 45.455 9.00 0.00 37.93 4.30
1168 1218 1.529438 GCGAAACAACAACTGATCGGA 59.471 47.619 9.00 0.00 37.93 4.55
1169 1219 1.531149 AGCGAAACAACAACTGATCGG 59.469 47.619 0.00 0.00 37.93 4.18
1170 1220 2.476619 AGAGCGAAACAACAACTGATCG 59.523 45.455 0.00 0.00 39.36 3.69
1171 1221 4.458708 GAAGAGCGAAACAACAACTGATC 58.541 43.478 0.00 0.00 0.00 2.92
1172 1222 3.251004 GGAAGAGCGAAACAACAACTGAT 59.749 43.478 0.00 0.00 0.00 2.90
1173 1223 2.612212 GGAAGAGCGAAACAACAACTGA 59.388 45.455 0.00 0.00 0.00 3.41
1174 1224 2.599848 CGGAAGAGCGAAACAACAACTG 60.600 50.000 0.00 0.00 0.00 3.16
1175 1225 1.597663 CGGAAGAGCGAAACAACAACT 59.402 47.619 0.00 0.00 0.00 3.16
1176 1226 1.595794 TCGGAAGAGCGAAACAACAAC 59.404 47.619 0.00 0.00 34.84 3.32
1177 1227 1.942677 TCGGAAGAGCGAAACAACAA 58.057 45.000 0.00 0.00 34.84 2.83
1178 1228 3.671262 TCGGAAGAGCGAAACAACA 57.329 47.368 0.00 0.00 34.84 3.33
1188 1238 2.376808 ACAGCAACTGATCGGAAGAG 57.623 50.000 9.00 0.00 38.12 2.85
1189 1239 2.839486 AACAGCAACTGATCGGAAGA 57.161 45.000 9.00 0.00 38.75 2.87
1190 1240 2.159787 CGAAACAGCAACTGATCGGAAG 60.160 50.000 9.00 0.93 39.03 3.46
1199 1273 0.529773 TCGTCAGCGAAACAGCAACT 60.530 50.000 0.00 0.00 44.92 3.16
1228 1302 1.858458 GCCTGAAAAGAAAACGGCAAC 59.142 47.619 0.00 0.00 37.48 4.17
1324 1403 4.211125 TCTTCTGATACTTGCGGATCTCT 58.789 43.478 0.00 0.00 0.00 3.10
1339 1418 0.174389 GCAGATCCGTGCTCTTCTGA 59.826 55.000 11.87 0.00 40.54 3.27
1402 1481 1.087501 GGTCCGTCTTGAAATCCTGC 58.912 55.000 0.00 0.00 0.00 4.85
1408 1487 1.959226 GCGCAGGTCCGTCTTGAAA 60.959 57.895 0.30 0.00 0.00 2.69
1471 1550 0.875728 CGAAGAGCCCGACGAGATAT 59.124 55.000 0.00 0.00 0.00 1.63
1474 1553 2.046604 TCGAAGAGCCCGACGAGA 60.047 61.111 0.00 0.00 0.00 4.04
1600 1685 0.452987 CCACAAAGGGCACGATGATG 59.547 55.000 0.80 0.00 0.00 3.07
1656 1752 4.100963 TCACTTATAACGATCCAGTGGCAT 59.899 41.667 3.51 0.00 36.34 4.40
1659 1755 5.263968 AGTCACTTATAACGATCCAGTGG 57.736 43.478 1.40 1.40 36.34 4.00
1807 1948 3.887716 AGCATCAAAGAACAGAAAGCACT 59.112 39.130 0.00 0.00 0.00 4.40
1833 1974 6.647212 ACAAAGCAAAGCAGAAAAACTAAC 57.353 33.333 0.00 0.00 0.00 2.34
1836 1977 6.311200 CAGTTACAAAGCAAAGCAGAAAAACT 59.689 34.615 0.00 0.00 0.00 2.66
1844 1985 2.100584 CACCCAGTTACAAAGCAAAGCA 59.899 45.455 0.00 0.00 0.00 3.91
1845 1986 2.100749 ACACCCAGTTACAAAGCAAAGC 59.899 45.455 0.00 0.00 0.00 3.51
1859 2000 1.881973 CATTGACCAGACAACACCCAG 59.118 52.381 0.00 0.00 32.50 4.45
1860 2001 1.492599 TCATTGACCAGACAACACCCA 59.507 47.619 0.00 0.00 32.50 4.51
1861 2002 2.270352 TCATTGACCAGACAACACCC 57.730 50.000 0.00 0.00 32.50 4.61
1862 2003 2.554032 CCTTCATTGACCAGACAACACC 59.446 50.000 0.00 0.00 32.50 4.16
1863 2004 3.476552 TCCTTCATTGACCAGACAACAC 58.523 45.455 0.00 0.00 32.50 3.32
1864 2005 3.855255 TCCTTCATTGACCAGACAACA 57.145 42.857 0.00 0.00 32.50 3.33
1865 2006 4.520492 ACAATCCTTCATTGACCAGACAAC 59.480 41.667 1.36 0.00 44.40 3.32
1866 2007 4.728772 ACAATCCTTCATTGACCAGACAA 58.271 39.130 1.36 0.00 44.40 3.18
1867 2008 4.371624 ACAATCCTTCATTGACCAGACA 57.628 40.909 1.36 0.00 44.40 3.41
1868 2009 4.520492 ACAACAATCCTTCATTGACCAGAC 59.480 41.667 1.36 0.00 44.40 3.51
1869 2010 4.728772 ACAACAATCCTTCATTGACCAGA 58.271 39.130 1.36 0.00 44.40 3.86
1870 2011 4.378770 CGACAACAATCCTTCATTGACCAG 60.379 45.833 1.36 0.00 44.40 4.00
1871 2012 3.501828 CGACAACAATCCTTCATTGACCA 59.498 43.478 1.36 0.00 44.40 4.02
1872 2013 3.119849 CCGACAACAATCCTTCATTGACC 60.120 47.826 1.36 0.00 44.40 4.02
1873 2014 3.119849 CCCGACAACAATCCTTCATTGAC 60.120 47.826 1.36 0.00 44.40 3.18
1874 2015 3.081061 CCCGACAACAATCCTTCATTGA 58.919 45.455 1.36 0.00 44.40 2.57
1875 2016 2.164219 CCCCGACAACAATCCTTCATTG 59.836 50.000 0.00 0.00 46.70 2.82
1876 2017 2.446435 CCCCGACAACAATCCTTCATT 58.554 47.619 0.00 0.00 0.00 2.57
1877 2018 1.955208 GCCCCGACAACAATCCTTCAT 60.955 52.381 0.00 0.00 0.00 2.57
1878 2019 0.608035 GCCCCGACAACAATCCTTCA 60.608 55.000 0.00 0.00 0.00 3.02
1879 2020 1.313091 GGCCCCGACAACAATCCTTC 61.313 60.000 0.00 0.00 0.00 3.46
1880 2021 1.304134 GGCCCCGACAACAATCCTT 60.304 57.895 0.00 0.00 0.00 3.36
1881 2022 2.198304 GAGGCCCCGACAACAATCCT 62.198 60.000 0.00 0.00 0.00 3.24
1882 2023 1.749258 GAGGCCCCGACAACAATCC 60.749 63.158 0.00 0.00 0.00 3.01
1883 2024 1.026718 CAGAGGCCCCGACAACAATC 61.027 60.000 0.00 0.00 0.00 2.67
1884 2025 1.002134 CAGAGGCCCCGACAACAAT 60.002 57.895 0.00 0.00 0.00 2.71
1885 2026 2.429930 CAGAGGCCCCGACAACAA 59.570 61.111 0.00 0.00 0.00 2.83
1886 2027 3.636231 CCAGAGGCCCCGACAACA 61.636 66.667 0.00 0.00 0.00 3.33
1887 2028 4.410400 CCCAGAGGCCCCGACAAC 62.410 72.222 0.00 0.00 0.00 3.32
1891 2032 3.962530 AAATCCCCAGAGGCCCCGA 62.963 63.158 0.00 0.00 34.51 5.14
1892 2033 1.641552 TAAAATCCCCAGAGGCCCCG 61.642 60.000 0.00 0.00 34.51 5.73
1893 2034 0.186143 CTAAAATCCCCAGAGGCCCC 59.814 60.000 0.00 0.00 34.51 5.80
1894 2035 0.186143 CCTAAAATCCCCAGAGGCCC 59.814 60.000 0.00 0.00 34.51 5.80
1895 2036 0.186143 CCCTAAAATCCCCAGAGGCC 59.814 60.000 0.00 0.00 34.51 5.19
1896 2037 0.927029 ACCCTAAAATCCCCAGAGGC 59.073 55.000 0.00 0.00 34.51 4.70
1897 2038 1.923148 ACACCCTAAAATCCCCAGAGG 59.077 52.381 0.00 0.00 0.00 3.69
1898 2039 3.245264 ACAACACCCTAAAATCCCCAGAG 60.245 47.826 0.00 0.00 0.00 3.35
1899 2040 2.719705 ACAACACCCTAAAATCCCCAGA 59.280 45.455 0.00 0.00 0.00 3.86
1900 2041 2.825532 CACAACACCCTAAAATCCCCAG 59.174 50.000 0.00 0.00 0.00 4.45
1901 2042 2.447429 TCACAACACCCTAAAATCCCCA 59.553 45.455 0.00 0.00 0.00 4.96
1902 2043 3.163616 TCACAACACCCTAAAATCCCC 57.836 47.619 0.00 0.00 0.00 4.81
1903 2044 6.379988 ACATTATCACAACACCCTAAAATCCC 59.620 38.462 0.00 0.00 0.00 3.85
1904 2045 7.122055 TCACATTATCACAACACCCTAAAATCC 59.878 37.037 0.00 0.00 0.00 3.01
1905 2046 8.050778 TCACATTATCACAACACCCTAAAATC 57.949 34.615 0.00 0.00 0.00 2.17
1906 2047 8.415950 TTCACATTATCACAACACCCTAAAAT 57.584 30.769 0.00 0.00 0.00 1.82
1907 2048 7.825331 TTCACATTATCACAACACCCTAAAA 57.175 32.000 0.00 0.00 0.00 1.52
1908 2049 8.415950 AATTCACATTATCACAACACCCTAAA 57.584 30.769 0.00 0.00 0.00 1.85
1909 2050 7.122055 GGAATTCACATTATCACAACACCCTAA 59.878 37.037 7.93 0.00 0.00 2.69
1910 2051 6.601613 GGAATTCACATTATCACAACACCCTA 59.398 38.462 7.93 0.00 0.00 3.53
1911 2052 5.418840 GGAATTCACATTATCACAACACCCT 59.581 40.000 7.93 0.00 0.00 4.34
1912 2053 5.184864 TGGAATTCACATTATCACAACACCC 59.815 40.000 7.93 0.00 0.00 4.61
1913 2054 6.092748 GTGGAATTCACATTATCACAACACC 58.907 40.000 7.93 0.00 45.39 4.16
1927 2068 5.254115 AGCTAGGGTAAAAGTGGAATTCAC 58.746 41.667 7.93 4.02 46.39 3.18
1928 2069 5.514500 AGCTAGGGTAAAAGTGGAATTCA 57.486 39.130 7.93 0.00 0.00 2.57
1929 2070 6.621613 CAAAGCTAGGGTAAAAGTGGAATTC 58.378 40.000 0.00 0.00 0.00 2.17
1930 2071 5.047306 GCAAAGCTAGGGTAAAAGTGGAATT 60.047 40.000 0.00 0.00 0.00 2.17
1931 2072 4.462834 GCAAAGCTAGGGTAAAAGTGGAAT 59.537 41.667 0.00 0.00 0.00 3.01
1932 2073 3.824443 GCAAAGCTAGGGTAAAAGTGGAA 59.176 43.478 0.00 0.00 0.00 3.53
1933 2074 3.418047 GCAAAGCTAGGGTAAAAGTGGA 58.582 45.455 0.00 0.00 0.00 4.02
1934 2075 2.161609 CGCAAAGCTAGGGTAAAAGTGG 59.838 50.000 0.00 0.00 0.00 4.00
1935 2076 2.812011 ACGCAAAGCTAGGGTAAAAGTG 59.188 45.455 6.96 0.00 0.00 3.16
1936 2077 3.136009 ACGCAAAGCTAGGGTAAAAGT 57.864 42.857 6.96 0.00 0.00 2.66
1937 2078 4.499037 AAACGCAAAGCTAGGGTAAAAG 57.501 40.909 8.84 0.00 0.00 2.27
1938 2079 6.578163 AATAAACGCAAAGCTAGGGTAAAA 57.422 33.333 8.84 0.27 0.00 1.52
1939 2080 6.578163 AAATAAACGCAAAGCTAGGGTAAA 57.422 33.333 8.84 2.30 0.00 2.01
1940 2081 7.868906 ATAAATAAACGCAAAGCTAGGGTAA 57.131 32.000 8.84 2.60 0.00 2.85
1941 2082 8.961294 TTATAAATAAACGCAAAGCTAGGGTA 57.039 30.769 8.84 0.00 0.00 3.69
1942 2083 7.868906 TTATAAATAAACGCAAAGCTAGGGT 57.131 32.000 3.36 3.36 0.00 4.34
2439 2580 3.301274 ACTCTAGTAATCCCCTGCAGAC 58.699 50.000 17.39 3.79 0.00 3.51
2440 2581 3.689872 ACTCTAGTAATCCCCTGCAGA 57.310 47.619 17.39 0.00 0.00 4.26
2441 2582 4.762289 AAACTCTAGTAATCCCCTGCAG 57.238 45.455 6.78 6.78 0.00 4.41
2442 2583 5.514500 AAAAACTCTAGTAATCCCCTGCA 57.486 39.130 0.00 0.00 0.00 4.41
2443 2584 8.521170 AATTAAAAACTCTAGTAATCCCCTGC 57.479 34.615 0.00 0.00 0.00 4.85
2445 2586 9.392259 CGAAATTAAAAACTCTAGTAATCCCCT 57.608 33.333 0.00 0.00 0.00 4.79
2446 2587 8.618677 CCGAAATTAAAAACTCTAGTAATCCCC 58.381 37.037 0.00 0.00 0.00 4.81
2447 2588 8.127327 GCCGAAATTAAAAACTCTAGTAATCCC 58.873 37.037 0.00 0.00 0.00 3.85
2448 2589 8.127327 GGCCGAAATTAAAAACTCTAGTAATCC 58.873 37.037 0.00 0.00 0.00 3.01
2449 2590 8.671028 TGGCCGAAATTAAAAACTCTAGTAATC 58.329 33.333 0.00 0.00 0.00 1.75
2450 2591 8.570068 TGGCCGAAATTAAAAACTCTAGTAAT 57.430 30.769 0.00 0.00 0.00 1.89
2451 2592 7.982761 TGGCCGAAATTAAAAACTCTAGTAA 57.017 32.000 0.00 0.00 0.00 2.24
2452 2593 8.044908 AGATGGCCGAAATTAAAAACTCTAGTA 58.955 33.333 0.00 0.00 0.00 1.82
2453 2594 6.884836 AGATGGCCGAAATTAAAAACTCTAGT 59.115 34.615 0.00 0.00 0.00 2.57
2454 2595 7.281100 AGAGATGGCCGAAATTAAAAACTCTAG 59.719 37.037 0.00 0.00 0.00 2.43
2455 2596 7.110155 AGAGATGGCCGAAATTAAAAACTCTA 58.890 34.615 0.00 0.00 0.00 2.43
2456 2597 5.946377 AGAGATGGCCGAAATTAAAAACTCT 59.054 36.000 0.00 0.00 0.00 3.24
2457 2598 6.196079 AGAGATGGCCGAAATTAAAAACTC 57.804 37.500 0.00 0.00 0.00 3.01
2458 2599 6.590234 AAGAGATGGCCGAAATTAAAAACT 57.410 33.333 0.00 0.00 0.00 2.66
2459 2600 7.360017 CCAAAAGAGATGGCCGAAATTAAAAAC 60.360 37.037 0.00 0.00 0.00 2.43
2460 2601 6.648725 CCAAAAGAGATGGCCGAAATTAAAAA 59.351 34.615 0.00 0.00 0.00 1.94
2461 2602 6.162777 CCAAAAGAGATGGCCGAAATTAAAA 58.837 36.000 0.00 0.00 0.00 1.52
2462 2603 5.245075 ACCAAAAGAGATGGCCGAAATTAAA 59.755 36.000 0.00 0.00 41.89 1.52
2463 2604 4.770010 ACCAAAAGAGATGGCCGAAATTAA 59.230 37.500 0.00 0.00 41.89 1.40
2464 2605 4.340617 ACCAAAAGAGATGGCCGAAATTA 58.659 39.130 0.00 0.00 41.89 1.40
2465 2606 3.165071 ACCAAAAGAGATGGCCGAAATT 58.835 40.909 0.00 0.00 41.89 1.82
2466 2607 2.807676 ACCAAAAGAGATGGCCGAAAT 58.192 42.857 0.00 0.00 41.89 2.17
2467 2608 2.286365 ACCAAAAGAGATGGCCGAAA 57.714 45.000 0.00 0.00 41.89 3.46
2468 2609 3.426787 TTACCAAAAGAGATGGCCGAA 57.573 42.857 0.00 0.00 41.89 4.30
2469 2610 3.426787 TTTACCAAAAGAGATGGCCGA 57.573 42.857 0.00 0.00 41.89 5.54
2470 2611 4.513198 TTTTTACCAAAAGAGATGGCCG 57.487 40.909 0.00 0.00 41.89 6.13
2489 2630 4.948341 AACTTAACTTGGGCCGATTTTT 57.052 36.364 1.20 0.00 0.00 1.94
2490 2631 6.599356 AATAACTTAACTTGGGCCGATTTT 57.401 33.333 1.20 0.00 0.00 1.82
2491 2632 6.599356 AAATAACTTAACTTGGGCCGATTT 57.401 33.333 0.00 0.00 0.00 2.17
2492 2633 6.394809 CAAAATAACTTAACTTGGGCCGATT 58.605 36.000 0.00 0.00 0.00 3.34
2493 2634 5.623596 GCAAAATAACTTAACTTGGGCCGAT 60.624 40.000 0.00 0.00 0.00 4.18
2494 2635 4.321378 GCAAAATAACTTAACTTGGGCCGA 60.321 41.667 0.00 0.00 0.00 5.54
2495 2636 3.924073 GCAAAATAACTTAACTTGGGCCG 59.076 43.478 0.00 0.00 0.00 6.13
2496 2637 4.250464 GGCAAAATAACTTAACTTGGGCC 58.750 43.478 0.00 0.00 0.00 5.80
2497 2638 4.250464 GGGCAAAATAACTTAACTTGGGC 58.750 43.478 0.00 0.00 0.00 5.36
2498 2639 4.490743 CGGGCAAAATAACTTAACTTGGG 58.509 43.478 0.00 0.00 0.00 4.12
2499 2640 4.490743 CCGGGCAAAATAACTTAACTTGG 58.509 43.478 0.00 0.00 0.00 3.61
2500 2641 3.924073 GCCGGGCAAAATAACTTAACTTG 59.076 43.478 15.62 0.00 0.00 3.16
2501 2642 3.056393 GGCCGGGCAAAATAACTTAACTT 60.056 43.478 25.33 0.00 0.00 2.66
2502 2643 2.494471 GGCCGGGCAAAATAACTTAACT 59.506 45.455 25.33 0.00 0.00 2.24
2503 2644 2.417651 GGGCCGGGCAAAATAACTTAAC 60.418 50.000 30.95 3.05 0.00 2.01
2504 2645 1.826096 GGGCCGGGCAAAATAACTTAA 59.174 47.619 30.95 0.00 0.00 1.85
2505 2646 1.272536 TGGGCCGGGCAAAATAACTTA 60.273 47.619 30.95 0.00 0.00 2.24
2506 2647 0.543174 TGGGCCGGGCAAAATAACTT 60.543 50.000 30.95 0.00 0.00 2.66
2507 2648 0.543174 TTGGGCCGGGCAAAATAACT 60.543 50.000 30.95 0.00 0.00 2.24
2508 2649 0.390603 GTTGGGCCGGGCAAAATAAC 60.391 55.000 30.95 20.03 0.00 1.89
2509 2650 1.878656 CGTTGGGCCGGGCAAAATAA 61.879 55.000 30.95 12.98 0.00 1.40
2510 2651 2.344203 CGTTGGGCCGGGCAAAATA 61.344 57.895 30.95 0.00 0.00 1.40
2511 2652 3.690280 CGTTGGGCCGGGCAAAAT 61.690 61.111 30.95 0.00 0.00 1.82
2518 2659 4.323477 TTCCTGACGTTGGGCCGG 62.323 66.667 0.00 0.00 0.00 6.13
2519 2660 2.742372 CTTCCTGACGTTGGGCCG 60.742 66.667 0.00 0.00 0.00 6.13
2520 2661 2.359975 CCTTCCTGACGTTGGGCC 60.360 66.667 0.00 0.00 0.00 5.80
2521 2662 1.228154 AACCTTCCTGACGTTGGGC 60.228 57.895 8.38 0.00 0.00 5.36
2522 2663 0.179029 ACAACCTTCCTGACGTTGGG 60.179 55.000 8.38 5.25 40.92 4.12
2523 2664 1.675552 AACAACCTTCCTGACGTTGG 58.324 50.000 0.00 0.00 40.92 3.77
2524 2665 6.403200 CCATAATAACAACCTTCCTGACGTTG 60.403 42.308 0.00 0.00 42.05 4.10
2525 2666 5.646360 CCATAATAACAACCTTCCTGACGTT 59.354 40.000 0.00 0.00 0.00 3.99
2526 2667 5.183228 CCATAATAACAACCTTCCTGACGT 58.817 41.667 0.00 0.00 0.00 4.34
2527 2668 5.183228 ACCATAATAACAACCTTCCTGACG 58.817 41.667 0.00 0.00 0.00 4.35
2528 2669 6.127730 CCAACCATAATAACAACCTTCCTGAC 60.128 42.308 0.00 0.00 0.00 3.51
2529 2670 5.949354 CCAACCATAATAACAACCTTCCTGA 59.051 40.000 0.00 0.00 0.00 3.86
2530 2671 5.127031 CCCAACCATAATAACAACCTTCCTG 59.873 44.000 0.00 0.00 0.00 3.86
2531 2672 5.269189 CCCAACCATAATAACAACCTTCCT 58.731 41.667 0.00 0.00 0.00 3.36
2532 2673 4.142026 GCCCAACCATAATAACAACCTTCC 60.142 45.833 0.00 0.00 0.00 3.46
2533 2674 4.464597 TGCCCAACCATAATAACAACCTTC 59.535 41.667 0.00 0.00 0.00 3.46
2534 2675 4.421131 TGCCCAACCATAATAACAACCTT 58.579 39.130 0.00 0.00 0.00 3.50
2535 2676 4.054359 TGCCCAACCATAATAACAACCT 57.946 40.909 0.00 0.00 0.00 3.50
2536 2677 4.810191 TTGCCCAACCATAATAACAACC 57.190 40.909 0.00 0.00 0.00 3.77
2537 2678 5.410132 GGTTTTGCCCAACCATAATAACAAC 59.590 40.000 8.88 0.00 45.12 3.32
2538 2679 5.552178 GGTTTTGCCCAACCATAATAACAA 58.448 37.500 8.88 0.00 45.12 2.83
2539 2680 5.153950 GGTTTTGCCCAACCATAATAACA 57.846 39.130 8.88 0.00 45.12 2.41
2548 2689 2.857186 ATTGATGGTTTTGCCCAACC 57.143 45.000 7.12 7.12 45.88 3.77
2549 2690 3.737850 TGAATTGATGGTTTTGCCCAAC 58.262 40.909 0.00 0.00 38.20 3.77
2550 2691 4.133078 GTTGAATTGATGGTTTTGCCCAA 58.867 39.130 0.00 0.00 38.20 4.12
2551 2692 3.390639 AGTTGAATTGATGGTTTTGCCCA 59.609 39.130 0.00 0.00 39.27 5.36
2552 2693 3.996363 GAGTTGAATTGATGGTTTTGCCC 59.004 43.478 0.00 0.00 36.04 5.36
2553 2694 3.996363 GGAGTTGAATTGATGGTTTTGCC 59.004 43.478 0.00 0.00 37.90 4.52
2554 2695 3.996363 GGGAGTTGAATTGATGGTTTTGC 59.004 43.478 0.00 0.00 0.00 3.68
2555 2696 5.473066 AGGGAGTTGAATTGATGGTTTTG 57.527 39.130 0.00 0.00 0.00 2.44
2556 2697 6.014584 GGTTAGGGAGTTGAATTGATGGTTTT 60.015 38.462 0.00 0.00 0.00 2.43
2557 2698 5.480422 GGTTAGGGAGTTGAATTGATGGTTT 59.520 40.000 0.00 0.00 0.00 3.27
2558 2699 5.016831 GGTTAGGGAGTTGAATTGATGGTT 58.983 41.667 0.00 0.00 0.00 3.67
2559 2700 4.569865 GGGTTAGGGAGTTGAATTGATGGT 60.570 45.833 0.00 0.00 0.00 3.55
2560 2701 3.954258 GGGTTAGGGAGTTGAATTGATGG 59.046 47.826 0.00 0.00 0.00 3.51
2561 2702 4.860022 AGGGTTAGGGAGTTGAATTGATG 58.140 43.478 0.00 0.00 0.00 3.07
2562 2703 6.652205 TTAGGGTTAGGGAGTTGAATTGAT 57.348 37.500 0.00 0.00 0.00 2.57
2563 2704 6.183361 TGTTTAGGGTTAGGGAGTTGAATTGA 60.183 38.462 0.00 0.00 0.00 2.57
2564 2705 6.007703 TGTTTAGGGTTAGGGAGTTGAATTG 58.992 40.000 0.00 0.00 0.00 2.32
2565 2706 6.208840 TGTTTAGGGTTAGGGAGTTGAATT 57.791 37.500 0.00 0.00 0.00 2.17
2566 2707 5.853572 TGTTTAGGGTTAGGGAGTTGAAT 57.146 39.130 0.00 0.00 0.00 2.57
2567 2708 5.853572 ATGTTTAGGGTTAGGGAGTTGAA 57.146 39.130 0.00 0.00 0.00 2.69
2568 2709 6.674861 TGATATGTTTAGGGTTAGGGAGTTGA 59.325 38.462 0.00 0.00 0.00 3.18
2569 2710 6.895782 TGATATGTTTAGGGTTAGGGAGTTG 58.104 40.000 0.00 0.00 0.00 3.16
2570 2711 7.707467 ATGATATGTTTAGGGTTAGGGAGTT 57.293 36.000 0.00 0.00 0.00 3.01
2571 2712 7.707467 AATGATATGTTTAGGGTTAGGGAGT 57.293 36.000 0.00 0.00 0.00 3.85
2572 2713 7.665974 GGAAATGATATGTTTAGGGTTAGGGAG 59.334 40.741 0.00 0.00 0.00 4.30
2573 2714 7.352522 AGGAAATGATATGTTTAGGGTTAGGGA 59.647 37.037 0.00 0.00 0.00 4.20
2574 2715 7.526918 AGGAAATGATATGTTTAGGGTTAGGG 58.473 38.462 0.00 0.00 0.00 3.53
2575 2716 8.440771 AGAGGAAATGATATGTTTAGGGTTAGG 58.559 37.037 0.00 0.00 0.00 2.69
2576 2717 9.277783 CAGAGGAAATGATATGTTTAGGGTTAG 57.722 37.037 0.00 0.00 0.00 2.34
2577 2718 7.719633 GCAGAGGAAATGATATGTTTAGGGTTA 59.280 37.037 0.00 0.00 0.00 2.85
2578 2719 6.547510 GCAGAGGAAATGATATGTTTAGGGTT 59.452 38.462 0.00 0.00 0.00 4.11
2579 2720 6.064717 GCAGAGGAAATGATATGTTTAGGGT 58.935 40.000 0.00 0.00 0.00 4.34
2580 2721 6.206243 CAGCAGAGGAAATGATATGTTTAGGG 59.794 42.308 0.00 0.00 0.00 3.53
2581 2722 6.293845 GCAGCAGAGGAAATGATATGTTTAGG 60.294 42.308 0.00 0.00 0.00 2.69
2582 2723 6.261603 TGCAGCAGAGGAAATGATATGTTTAG 59.738 38.462 0.00 0.00 0.00 1.85
2583 2724 6.038603 GTGCAGCAGAGGAAATGATATGTTTA 59.961 38.462 0.00 0.00 0.00 2.01
2584 2725 4.951715 TGCAGCAGAGGAAATGATATGTTT 59.048 37.500 0.00 0.00 0.00 2.83
2585 2726 4.337555 GTGCAGCAGAGGAAATGATATGTT 59.662 41.667 0.00 0.00 0.00 2.71
2586 2727 3.881688 GTGCAGCAGAGGAAATGATATGT 59.118 43.478 0.00 0.00 0.00 2.29
2587 2728 3.881089 TGTGCAGCAGAGGAAATGATATG 59.119 43.478 0.00 0.00 0.00 1.78
2588 2729 4.160642 TGTGCAGCAGAGGAAATGATAT 57.839 40.909 0.00 0.00 0.00 1.63
2589 2730 3.632643 TGTGCAGCAGAGGAAATGATA 57.367 42.857 0.00 0.00 0.00 2.15
2590 2731 2.502142 TGTGCAGCAGAGGAAATGAT 57.498 45.000 0.00 0.00 0.00 2.45
2591 2732 2.275134 TTGTGCAGCAGAGGAAATGA 57.725 45.000 0.00 0.00 0.00 2.57
2592 2733 2.942710 CTTTGTGCAGCAGAGGAAATG 58.057 47.619 0.00 0.00 0.00 2.32
2597 2738 2.633509 GCCCTTTGTGCAGCAGAGG 61.634 63.158 14.84 14.84 46.05 3.69
2598 2739 1.900016 TGCCCTTTGTGCAGCAGAG 60.900 57.895 0.00 0.00 34.05 3.35
2599 2740 2.195411 TGCCCTTTGTGCAGCAGA 59.805 55.556 0.00 0.00 34.05 4.26
2600 2741 2.018727 TTGTGCCCTTTGTGCAGCAG 62.019 55.000 0.00 0.00 39.87 4.24
2601 2742 2.056815 TTGTGCCCTTTGTGCAGCA 61.057 52.632 0.00 0.00 39.87 4.41
2602 2743 1.592400 GTTGTGCCCTTTGTGCAGC 60.592 57.895 0.00 0.00 39.87 5.25
2603 2744 1.299316 CGTTGTGCCCTTTGTGCAG 60.299 57.895 0.00 0.00 39.87 4.41
2604 2745 2.804167 CGTTGTGCCCTTTGTGCA 59.196 55.556 0.00 0.00 36.12 4.57
2605 2746 2.658268 GCGTTGTGCCCTTTGTGC 60.658 61.111 0.00 0.00 37.76 4.57
2606 2747 1.588667 GTGCGTTGTGCCCTTTGTG 60.589 57.895 0.00 0.00 45.60 3.33
2607 2748 2.049185 TGTGCGTTGTGCCCTTTGT 61.049 52.632 0.00 0.00 45.60 2.83
2608 2749 1.588667 GTGTGCGTTGTGCCCTTTG 60.589 57.895 0.00 0.00 45.60 2.77
2609 2750 2.804856 GTGTGCGTTGTGCCCTTT 59.195 55.556 0.00 0.00 45.60 3.11
2610 2751 3.582120 CGTGTGCGTTGTGCCCTT 61.582 61.111 0.00 0.00 45.60 3.95
2611 2752 4.539083 TCGTGTGCGTTGTGCCCT 62.539 61.111 0.00 0.00 45.60 5.19
2612 2753 4.012895 CTCGTGTGCGTTGTGCCC 62.013 66.667 0.00 0.00 45.60 5.36
2613 2754 4.666532 GCTCGTGTGCGTTGTGCC 62.667 66.667 0.00 0.00 45.60 5.01
2614 2755 3.564342 GAGCTCGTGTGCGTTGTGC 62.564 63.158 0.00 0.00 46.70 4.57
2615 2756 2.546321 GAGCTCGTGTGCGTTGTG 59.454 61.111 0.00 0.00 39.49 3.33
2616 2757 2.661866 GGAGCTCGTGTGCGTTGT 60.662 61.111 7.83 0.00 39.49 3.32
2617 2758 2.661537 TGGAGCTCGTGTGCGTTG 60.662 61.111 7.83 0.00 39.49 4.10
2618 2759 2.661866 GTGGAGCTCGTGTGCGTT 60.662 61.111 7.83 0.00 39.49 4.84
2619 2760 4.664677 GGTGGAGCTCGTGTGCGT 62.665 66.667 7.83 0.00 39.49 5.24
2624 2765 2.890847 CTTAGCCGGTGGAGCTCGTG 62.891 65.000 7.83 0.00 41.83 4.35
2625 2766 2.678934 TTAGCCGGTGGAGCTCGT 60.679 61.111 7.83 0.00 41.83 4.18
2626 2767 2.105128 CTTAGCCGGTGGAGCTCG 59.895 66.667 7.83 0.00 41.83 5.03
2627 2768 2.501610 CCTTAGCCGGTGGAGCTC 59.498 66.667 4.71 4.71 41.83 4.09
2628 2769 3.787001 GCCTTAGCCGGTGGAGCT 61.787 66.667 1.90 0.00 44.49 4.09
2635 2776 4.241555 ATGGAGCGCCTTAGCCGG 62.242 66.667 8.34 0.00 38.01 6.13
2636 2777 2.663188 GATGGAGCGCCTTAGCCG 60.663 66.667 8.34 0.00 38.01 5.52
2637 2778 1.301322 GAGATGGAGCGCCTTAGCC 60.301 63.158 8.34 0.00 38.01 3.93
2638 2779 1.663074 CGAGATGGAGCGCCTTAGC 60.663 63.158 8.34 0.00 34.31 3.09
2639 2780 0.600557 ATCGAGATGGAGCGCCTTAG 59.399 55.000 8.34 0.00 34.31 2.18
2640 2781 0.315251 CATCGAGATGGAGCGCCTTA 59.685 55.000 8.34 0.00 35.24 2.69
2641 2782 1.068753 CATCGAGATGGAGCGCCTT 59.931 57.895 8.34 0.00 35.24 4.35
2642 2783 2.733301 CATCGAGATGGAGCGCCT 59.267 61.111 8.34 0.00 35.24 5.52
2650 2791 2.097629 ACAGTCGTGTACCATCGAGATG 59.902 50.000 6.12 6.12 36.76 2.90
2651 2792 2.366533 ACAGTCGTGTACCATCGAGAT 58.633 47.619 5.41 0.00 36.76 2.75
2652 2793 1.817357 ACAGTCGTGTACCATCGAGA 58.183 50.000 5.41 0.00 36.76 4.04
2653 2794 2.095415 TGAACAGTCGTGTACCATCGAG 60.095 50.000 5.41 0.00 35.08 4.04
2654 2795 1.881324 TGAACAGTCGTGTACCATCGA 59.119 47.619 0.00 0.00 35.08 3.59
2655 2796 1.983605 GTGAACAGTCGTGTACCATCG 59.016 52.381 0.00 0.00 35.08 3.84
2656 2797 2.029290 AGGTGAACAGTCGTGTACCATC 60.029 50.000 0.00 0.00 35.08 3.51
2657 2798 1.968493 AGGTGAACAGTCGTGTACCAT 59.032 47.619 0.00 0.00 35.08 3.55
2658 2799 1.067974 CAGGTGAACAGTCGTGTACCA 59.932 52.381 0.00 0.00 35.08 3.25
2659 2800 1.068127 ACAGGTGAACAGTCGTGTACC 59.932 52.381 0.00 0.00 35.08 3.34
2660 2801 2.503920 ACAGGTGAACAGTCGTGTAC 57.496 50.000 0.00 0.00 35.08 2.90
2661 2802 2.816689 CAACAGGTGAACAGTCGTGTA 58.183 47.619 0.00 0.00 35.08 2.90
2662 2803 1.651987 CAACAGGTGAACAGTCGTGT 58.348 50.000 0.00 0.00 39.19 4.49
2663 2804 0.304705 GCAACAGGTGAACAGTCGTG 59.695 55.000 0.00 0.00 0.00 4.35
2664 2805 0.814010 GGCAACAGGTGAACAGTCGT 60.814 55.000 0.00 0.00 0.00 4.34
2665 2806 0.532862 AGGCAACAGGTGAACAGTCG 60.533 55.000 0.00 0.00 41.41 4.18
2666 2807 1.604278 GAAGGCAACAGGTGAACAGTC 59.396 52.381 0.00 0.00 41.41 3.51
2667 2808 1.680338 GAAGGCAACAGGTGAACAGT 58.320 50.000 0.00 0.00 41.41 3.55
2668 2809 0.954452 GGAAGGCAACAGGTGAACAG 59.046 55.000 0.00 0.00 41.41 3.16
2669 2810 0.467290 GGGAAGGCAACAGGTGAACA 60.467 55.000 0.00 0.00 41.41 3.18
2670 2811 0.467290 TGGGAAGGCAACAGGTGAAC 60.467 55.000 0.00 0.00 41.41 3.18
2671 2812 0.482446 ATGGGAAGGCAACAGGTGAA 59.518 50.000 0.00 0.00 41.41 3.18
2672 2813 0.251297 CATGGGAAGGCAACAGGTGA 60.251 55.000 0.00 0.00 41.41 4.02
2673 2814 1.880819 GCATGGGAAGGCAACAGGTG 61.881 60.000 0.00 0.00 41.41 4.00
2674 2815 1.607467 GCATGGGAAGGCAACAGGT 60.607 57.895 0.00 0.00 41.41 4.00
2675 2816 2.353610 GGCATGGGAAGGCAACAGG 61.354 63.158 0.00 0.00 41.41 4.00
2676 2817 2.353610 GGGCATGGGAAGGCAACAG 61.354 63.158 0.00 0.00 41.41 3.16
2677 2818 2.283821 GGGCATGGGAAGGCAACA 60.284 61.111 0.00 0.00 41.41 3.33
2678 2819 2.283821 TGGGCATGGGAAGGCAAC 60.284 61.111 0.00 0.00 0.00 4.17
2679 2820 2.037687 CTGGGCATGGGAAGGCAA 59.962 61.111 0.00 0.00 0.00 4.52
2680 2821 4.764771 GCTGGGCATGGGAAGGCA 62.765 66.667 0.00 0.00 0.00 4.75
2681 2822 4.453892 AGCTGGGCATGGGAAGGC 62.454 66.667 0.00 0.00 0.00 4.35
2682 2823 2.123982 GAGCTGGGCATGGGAAGG 60.124 66.667 0.00 0.00 0.00 3.46
2683 2824 1.107538 CATGAGCTGGGCATGGGAAG 61.108 60.000 6.07 0.00 39.48 3.46
2684 2825 1.076559 CATGAGCTGGGCATGGGAA 60.077 57.895 6.07 0.00 39.48 3.97
2685 2826 1.991339 CTCATGAGCTGGGCATGGGA 61.991 60.000 10.38 0.00 45.02 4.37
2686 2827 1.528542 CTCATGAGCTGGGCATGGG 60.529 63.158 10.38 6.69 42.53 4.00
2687 2828 4.159266 CTCATGAGCTGGGCATGG 57.841 61.111 10.38 2.33 42.53 3.66
2706 2847 1.132640 GGAAGATGCGCGTTCACAC 59.867 57.895 8.43 0.00 0.00 3.82
2707 2848 2.379634 CGGAAGATGCGCGTTCACA 61.380 57.895 8.43 0.00 0.00 3.58
2708 2849 2.279937 GACGGAAGATGCGCGTTCAC 62.280 60.000 8.43 4.19 33.30 3.18
2709 2850 2.048597 ACGGAAGATGCGCGTTCA 60.049 55.556 8.43 0.00 33.30 3.18
2710 2851 2.695646 GACGGAAGATGCGCGTTC 59.304 61.111 8.43 5.96 33.30 3.95
2711 2852 3.179265 CGACGGAAGATGCGCGTT 61.179 61.111 8.43 0.00 33.30 4.84


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.