Multiple sequence alignment - TraesCS6A01G030600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G030600 chr6A 100.000 2537 0 0 1 2537 15716427 15718963 0.000000e+00 4686.0
1 TraesCS6A01G030600 chr6A 90.339 590 53 3 362 950 261010182 261010768 0.000000e+00 771.0
2 TraesCS6A01G030600 chr6A 82.924 814 127 7 954 1758 15872611 15871801 0.000000e+00 723.0
3 TraesCS6A01G030600 chr6A 77.286 1017 178 35 954 1951 16598253 16599235 1.330000e-152 549.0
4 TraesCS6A01G030600 chr6A 82.013 606 102 6 954 1556 15924657 15924056 2.250000e-140 508.0
5 TraesCS6A01G030600 chr6A 76.240 867 165 32 961 1807 15939524 15938679 3.020000e-114 422.0
6 TraesCS6A01G030600 chr6A 98.113 53 1 0 1846 1898 16615756 16615808 2.690000e-15 93.5
7 TraesCS6A01G030600 chr6D 84.068 1519 193 21 959 2453 14688668 14687175 0.000000e+00 1419.0
8 TraesCS6A01G030600 chr6D 85.478 1026 135 10 954 1969 14518221 14519242 0.000000e+00 1057.0
9 TraesCS6A01G030600 chr6D 78.604 874 157 23 954 1808 14435679 14436541 3.690000e-153 551.0
10 TraesCS6A01G030600 chr6D 78.539 890 152 23 954 1823 14940578 14939708 1.330000e-152 549.0
11 TraesCS6A01G030600 chr6D 80.887 586 108 4 958 1541 16375997 16376580 2.300000e-125 459.0
12 TraesCS6A01G030600 chr6D 82.906 234 31 7 1821 2047 15348676 15348445 4.280000e-48 202.0
13 TraesCS6A01G030600 chr6D 81.959 194 29 5 1821 2009 14731461 14731269 2.610000e-35 159.0
14 TraesCS6A01G030600 chr6B 93.857 814 48 2 954 1765 26291896 26292709 0.000000e+00 1225.0
15 TraesCS6A01G030600 chr6B 81.091 825 138 13 954 1765 26841366 26840547 0.000000e+00 643.0
16 TraesCS6A01G030600 chr6B 80.630 826 140 15 954 1765 26856264 26855445 2.770000e-174 621.0
17 TraesCS6A01G030600 chr6B 76.114 875 169 33 954 1807 27076389 27075534 3.020000e-114 422.0
18 TraesCS6A01G030600 chr4A 93.576 576 27 7 382 951 63427651 63428222 0.000000e+00 850.0
19 TraesCS6A01G030600 chr7A 91.851 589 42 5 362 949 123194588 123195171 0.000000e+00 817.0
20 TraesCS6A01G030600 chr7A 90.846 579 47 4 372 950 114807444 114808016 0.000000e+00 771.0
21 TraesCS6A01G030600 chr7A 86.207 725 80 13 229 950 114630574 114631281 0.000000e+00 767.0
22 TraesCS6A01G030600 chr7A 94.071 253 15 0 1 253 676981678 676981426 3.960000e-103 385.0
23 TraesCS6A01G030600 chr7A 80.928 194 29 6 1821 2009 8457466 8457276 2.030000e-31 147.0
24 TraesCS6A01G030600 chr5A 90.400 625 46 11 334 957 543541240 543540629 0.000000e+00 809.0
25 TraesCS6A01G030600 chr5A 88.654 379 31 4 1 369 457110122 457110498 3.850000e-123 451.0
26 TraesCS6A01G030600 chr5A 78.543 247 30 10 2034 2275 481940131 481939903 9.460000e-30 141.0
27 TraesCS6A01G030600 chr3A 87.246 737 60 24 229 950 719752814 719753531 0.000000e+00 809.0
28 TraesCS6A01G030600 chr3A 92.857 280 19 1 1 279 658479996 658479717 3.040000e-109 405.0
29 TraesCS6A01G030600 chr1A 92.035 565 39 5 393 957 467365369 467364811 0.000000e+00 789.0
30 TraesCS6A01G030600 chr1A 88.485 660 56 13 310 965 526964448 526963805 0.000000e+00 780.0
31 TraesCS6A01G030600 chr1A 81.443 194 30 5 1821 2009 494434290 494434098 1.220000e-33 154.0
32 TraesCS6A01G030600 chr4B 77.734 1024 178 32 954 1949 575726685 575727686 1.310000e-162 582.0
33 TraesCS6A01G030600 chr5D 78.473 799 143 22 958 1748 27978724 27977947 1.750000e-136 496.0
34 TraesCS6A01G030600 chr5D 77.392 836 161 22 954 1774 27984906 27984084 2.950000e-129 472.0
35 TraesCS6A01G030600 chr5D 90.079 252 17 7 1 246 523288983 523288734 1.130000e-83 320.0
36 TraesCS6A01G030600 chr2A 82.101 514 66 17 242 747 110203210 110203705 1.400000e-112 416.0
37 TraesCS6A01G030600 chr2D 90.698 301 19 4 1 301 613192838 613192547 2.370000e-105 392.0
38 TraesCS6A01G030600 chr2D 87.179 312 25 11 1 303 565851882 565852187 8.690000e-90 340.0
39 TraesCS6A01G030600 chr2D 94.064 219 11 2 1 219 475811169 475811385 5.230000e-87 331.0
40 TraesCS6A01G030600 chr2D 85.804 317 28 10 1 301 577637704 577637389 1.130000e-83 320.0
41 TraesCS6A01G030600 chrUn 84.868 304 31 11 1 295 103720262 103720559 2.470000e-75 292.0
42 TraesCS6A01G030600 chr5B 77.733 247 32 10 2034 2275 458055799 458055571 2.050000e-26 130.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G030600 chr6A 15716427 15718963 2536 False 4686 4686 100.000 1 2537 1 chr6A.!!$F1 2536
1 TraesCS6A01G030600 chr6A 261010182 261010768 586 False 771 771 90.339 362 950 1 chr6A.!!$F4 588
2 TraesCS6A01G030600 chr6A 15871801 15872611 810 True 723 723 82.924 954 1758 1 chr6A.!!$R1 804
3 TraesCS6A01G030600 chr6A 16598253 16599235 982 False 549 549 77.286 954 1951 1 chr6A.!!$F2 997
4 TraesCS6A01G030600 chr6A 15924056 15924657 601 True 508 508 82.013 954 1556 1 chr6A.!!$R2 602
5 TraesCS6A01G030600 chr6A 15938679 15939524 845 True 422 422 76.240 961 1807 1 chr6A.!!$R3 846
6 TraesCS6A01G030600 chr6D 14687175 14688668 1493 True 1419 1419 84.068 959 2453 1 chr6D.!!$R1 1494
7 TraesCS6A01G030600 chr6D 14518221 14519242 1021 False 1057 1057 85.478 954 1969 1 chr6D.!!$F2 1015
8 TraesCS6A01G030600 chr6D 14435679 14436541 862 False 551 551 78.604 954 1808 1 chr6D.!!$F1 854
9 TraesCS6A01G030600 chr6D 14939708 14940578 870 True 549 549 78.539 954 1823 1 chr6D.!!$R3 869
10 TraesCS6A01G030600 chr6D 16375997 16376580 583 False 459 459 80.887 958 1541 1 chr6D.!!$F3 583
11 TraesCS6A01G030600 chr6B 26291896 26292709 813 False 1225 1225 93.857 954 1765 1 chr6B.!!$F1 811
12 TraesCS6A01G030600 chr6B 26840547 26841366 819 True 643 643 81.091 954 1765 1 chr6B.!!$R1 811
13 TraesCS6A01G030600 chr6B 26855445 26856264 819 True 621 621 80.630 954 1765 1 chr6B.!!$R2 811
14 TraesCS6A01G030600 chr6B 27075534 27076389 855 True 422 422 76.114 954 1807 1 chr6B.!!$R3 853
15 TraesCS6A01G030600 chr4A 63427651 63428222 571 False 850 850 93.576 382 951 1 chr4A.!!$F1 569
16 TraesCS6A01G030600 chr7A 123194588 123195171 583 False 817 817 91.851 362 949 1 chr7A.!!$F3 587
17 TraesCS6A01G030600 chr7A 114807444 114808016 572 False 771 771 90.846 372 950 1 chr7A.!!$F2 578
18 TraesCS6A01G030600 chr7A 114630574 114631281 707 False 767 767 86.207 229 950 1 chr7A.!!$F1 721
19 TraesCS6A01G030600 chr5A 543540629 543541240 611 True 809 809 90.400 334 957 1 chr5A.!!$R2 623
20 TraesCS6A01G030600 chr3A 719752814 719753531 717 False 809 809 87.246 229 950 1 chr3A.!!$F1 721
21 TraesCS6A01G030600 chr1A 467364811 467365369 558 True 789 789 92.035 393 957 1 chr1A.!!$R1 564
22 TraesCS6A01G030600 chr1A 526963805 526964448 643 True 780 780 88.485 310 965 1 chr1A.!!$R3 655
23 TraesCS6A01G030600 chr4B 575726685 575727686 1001 False 582 582 77.734 954 1949 1 chr4B.!!$F1 995
24 TraesCS6A01G030600 chr5D 27977947 27978724 777 True 496 496 78.473 958 1748 1 chr5D.!!$R1 790
25 TraesCS6A01G030600 chr5D 27984084 27984906 822 True 472 472 77.392 954 1774 1 chr5D.!!$R2 820

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
135 136 0.036306 AAACGTGACATGAGGGGGTC 59.964 55.0 0.0 0.0 34.63 4.46 F
172 173 0.539986 TTAGAGGGTCGTGGATTGCC 59.460 55.0 0.0 0.0 0.00 4.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1500 1594 0.252974 TAGCTGGCACCTCCCCTTTA 60.253 55.000 0.0 0.0 0.0 1.85 R
1664 1786 3.426159 GCAATGACCAAACCGACATGTAG 60.426 47.826 0.0 0.0 0.0 2.74 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 3.225177 CCTATCTAGGACTCCGTTCCA 57.775 52.381 0.00 0.00 46.63 3.53
25 26 3.563223 CCTATCTAGGACTCCGTTCCAA 58.437 50.000 0.00 0.00 46.63 3.53
26 27 3.958798 CCTATCTAGGACTCCGTTCCAAA 59.041 47.826 0.00 0.00 46.63 3.28
27 28 4.404715 CCTATCTAGGACTCCGTTCCAAAA 59.595 45.833 0.00 0.00 46.63 2.44
28 29 3.672767 TCTAGGACTCCGTTCCAAAAC 57.327 47.619 0.00 0.00 38.25 2.43
29 30 2.967201 TCTAGGACTCCGTTCCAAAACA 59.033 45.455 0.00 0.00 38.25 2.83
30 31 2.721425 AGGACTCCGTTCCAAAACAA 57.279 45.000 0.00 0.00 38.25 2.83
31 32 2.294979 AGGACTCCGTTCCAAAACAAC 58.705 47.619 0.00 0.00 38.25 3.32
32 33 2.092592 AGGACTCCGTTCCAAAACAACT 60.093 45.455 0.00 0.00 38.25 3.16
33 34 2.686405 GGACTCCGTTCCAAAACAACTT 59.314 45.455 0.00 0.00 35.49 2.66
34 35 3.129813 GGACTCCGTTCCAAAACAACTTT 59.870 43.478 0.00 0.00 35.49 2.66
35 36 4.102649 GACTCCGTTCCAAAACAACTTTG 58.897 43.478 0.00 0.00 43.56 2.77
36 37 3.759618 ACTCCGTTCCAAAACAACTTTGA 59.240 39.130 0.00 0.00 46.35 2.69
37 38 4.218852 ACTCCGTTCCAAAACAACTTTGAA 59.781 37.500 0.00 0.00 46.35 2.69
38 39 4.739195 TCCGTTCCAAAACAACTTTGAAG 58.261 39.130 0.00 0.00 46.35 3.02
39 40 4.459685 TCCGTTCCAAAACAACTTTGAAGA 59.540 37.500 0.00 0.00 46.35 2.87
40 41 4.798387 CCGTTCCAAAACAACTTTGAAGAG 59.202 41.667 0.00 0.00 46.35 2.85
41 42 4.265320 CGTTCCAAAACAACTTTGAAGAGC 59.735 41.667 0.00 0.00 46.35 4.09
42 43 5.410924 GTTCCAAAACAACTTTGAAGAGCT 58.589 37.500 0.00 0.00 46.35 4.09
43 44 5.659440 TCCAAAACAACTTTGAAGAGCTT 57.341 34.783 0.00 0.00 46.35 3.74
44 45 5.650543 TCCAAAACAACTTTGAAGAGCTTC 58.349 37.500 3.32 3.32 46.35 3.86
45 46 4.500477 CCAAAACAACTTTGAAGAGCTTCG 59.500 41.667 5.82 0.00 46.35 3.79
46 47 4.965119 AAACAACTTTGAAGAGCTTCGT 57.035 36.364 5.82 0.00 42.28 3.85
47 48 6.255215 CAAAACAACTTTGAAGAGCTTCGTA 58.745 36.000 5.82 0.00 46.35 3.43
48 49 5.405331 AACAACTTTGAAGAGCTTCGTAC 57.595 39.130 5.82 0.00 42.28 3.67
49 50 3.808174 ACAACTTTGAAGAGCTTCGTACC 59.192 43.478 5.82 0.00 42.28 3.34
50 51 3.746045 ACTTTGAAGAGCTTCGTACCA 57.254 42.857 5.82 0.00 42.28 3.25
51 52 4.273148 ACTTTGAAGAGCTTCGTACCAT 57.727 40.909 5.82 0.00 42.28 3.55
52 53 4.246458 ACTTTGAAGAGCTTCGTACCATC 58.754 43.478 5.82 0.00 42.28 3.51
53 54 3.953712 TTGAAGAGCTTCGTACCATCA 57.046 42.857 5.82 0.00 42.28 3.07
54 55 4.471904 TTGAAGAGCTTCGTACCATCAT 57.528 40.909 5.82 0.00 42.28 2.45
55 56 3.785486 TGAAGAGCTTCGTACCATCATG 58.215 45.455 5.82 0.00 42.28 3.07
56 57 2.231215 AGAGCTTCGTACCATCATGC 57.769 50.000 0.00 0.00 0.00 4.06
57 58 1.482182 AGAGCTTCGTACCATCATGCA 59.518 47.619 0.00 0.00 0.00 3.96
58 59 1.594862 GAGCTTCGTACCATCATGCAC 59.405 52.381 0.00 0.00 0.00 4.57
59 60 0.657840 GCTTCGTACCATCATGCACC 59.342 55.000 0.00 0.00 0.00 5.01
60 61 1.743772 GCTTCGTACCATCATGCACCT 60.744 52.381 0.00 0.00 0.00 4.00
61 62 1.935873 CTTCGTACCATCATGCACCTG 59.064 52.381 0.00 0.00 0.00 4.00
62 63 0.901827 TCGTACCATCATGCACCTGT 59.098 50.000 0.00 0.00 0.00 4.00
63 64 1.277842 TCGTACCATCATGCACCTGTT 59.722 47.619 0.00 0.00 0.00 3.16
64 65 2.498078 TCGTACCATCATGCACCTGTTA 59.502 45.455 0.00 0.00 0.00 2.41
65 66 2.607635 CGTACCATCATGCACCTGTTAC 59.392 50.000 0.00 0.00 0.00 2.50
66 67 3.678806 CGTACCATCATGCACCTGTTACT 60.679 47.826 0.00 0.00 0.00 2.24
67 68 3.439857 ACCATCATGCACCTGTTACTT 57.560 42.857 0.00 0.00 0.00 2.24
68 69 3.766545 ACCATCATGCACCTGTTACTTT 58.233 40.909 0.00 0.00 0.00 2.66
69 70 3.758554 ACCATCATGCACCTGTTACTTTC 59.241 43.478 0.00 0.00 0.00 2.62
70 71 3.181507 CCATCATGCACCTGTTACTTTCG 60.182 47.826 0.00 0.00 0.00 3.46
71 72 1.804151 TCATGCACCTGTTACTTTCGC 59.196 47.619 0.00 0.00 0.00 4.70
72 73 1.135689 CATGCACCTGTTACTTTCGCC 60.136 52.381 0.00 0.00 0.00 5.54
73 74 0.107831 TGCACCTGTTACTTTCGCCT 59.892 50.000 0.00 0.00 0.00 5.52
74 75 1.345089 TGCACCTGTTACTTTCGCCTA 59.655 47.619 0.00 0.00 0.00 3.93
75 76 2.224329 TGCACCTGTTACTTTCGCCTAA 60.224 45.455 0.00 0.00 0.00 2.69
76 77 3.007635 GCACCTGTTACTTTCGCCTAAT 58.992 45.455 0.00 0.00 0.00 1.73
77 78 3.181510 GCACCTGTTACTTTCGCCTAATG 60.182 47.826 0.00 0.00 0.00 1.90
78 79 4.250464 CACCTGTTACTTTCGCCTAATGA 58.750 43.478 0.00 0.00 0.00 2.57
79 80 4.876107 CACCTGTTACTTTCGCCTAATGAT 59.124 41.667 0.00 0.00 0.00 2.45
80 81 4.876107 ACCTGTTACTTTCGCCTAATGATG 59.124 41.667 0.00 0.00 0.00 3.07
81 82 5.116180 CCTGTTACTTTCGCCTAATGATGA 58.884 41.667 0.00 0.00 0.00 2.92
82 83 5.584649 CCTGTTACTTTCGCCTAATGATGAA 59.415 40.000 0.00 0.00 0.00 2.57
83 84 6.238211 CCTGTTACTTTCGCCTAATGATGAAG 60.238 42.308 0.00 0.00 0.00 3.02
84 85 6.403049 TGTTACTTTCGCCTAATGATGAAGA 58.597 36.000 0.00 0.00 0.00 2.87
85 86 6.312918 TGTTACTTTCGCCTAATGATGAAGAC 59.687 38.462 0.00 0.00 0.00 3.01
86 87 4.832248 ACTTTCGCCTAATGATGAAGACA 58.168 39.130 0.00 0.00 0.00 3.41
87 88 5.431765 ACTTTCGCCTAATGATGAAGACAT 58.568 37.500 0.00 0.00 39.67 3.06
88 89 5.295292 ACTTTCGCCTAATGATGAAGACATG 59.705 40.000 0.00 0.00 36.82 3.21
89 90 3.732212 TCGCCTAATGATGAAGACATGG 58.268 45.455 0.00 0.00 36.82 3.66
90 91 3.134623 TCGCCTAATGATGAAGACATGGT 59.865 43.478 0.00 0.00 36.82 3.55
91 92 3.879295 CGCCTAATGATGAAGACATGGTT 59.121 43.478 0.00 0.00 36.82 3.67
92 93 4.336433 CGCCTAATGATGAAGACATGGTTT 59.664 41.667 0.00 0.00 36.82 3.27
93 94 5.163622 CGCCTAATGATGAAGACATGGTTTT 60.164 40.000 0.00 0.00 36.82 2.43
94 95 6.038356 GCCTAATGATGAAGACATGGTTTTG 58.962 40.000 0.00 0.00 36.82 2.44
95 96 6.350445 GCCTAATGATGAAGACATGGTTTTGT 60.350 38.462 0.00 0.00 36.82 2.83
96 97 7.605449 CCTAATGATGAAGACATGGTTTTGTT 58.395 34.615 0.00 0.00 36.82 2.83
97 98 7.543172 CCTAATGATGAAGACATGGTTTTGTTG 59.457 37.037 0.00 0.00 36.82 3.33
98 99 6.653526 ATGATGAAGACATGGTTTTGTTGA 57.346 33.333 0.00 0.00 36.82 3.18
99 100 6.462552 TGATGAAGACATGGTTTTGTTGAA 57.537 33.333 0.00 0.00 36.82 2.69
100 101 7.053316 TGATGAAGACATGGTTTTGTTGAAT 57.947 32.000 0.00 0.00 36.82 2.57
101 102 7.147312 TGATGAAGACATGGTTTTGTTGAATC 58.853 34.615 0.00 0.00 36.82 2.52
102 103 5.841810 TGAAGACATGGTTTTGTTGAATCC 58.158 37.500 0.00 0.00 0.00 3.01
103 104 5.598005 TGAAGACATGGTTTTGTTGAATCCT 59.402 36.000 0.00 0.00 0.00 3.24
104 105 6.098124 TGAAGACATGGTTTTGTTGAATCCTT 59.902 34.615 0.00 0.00 0.00 3.36
105 106 6.484364 AGACATGGTTTTGTTGAATCCTTT 57.516 33.333 0.00 0.00 0.00 3.11
106 107 6.282930 AGACATGGTTTTGTTGAATCCTTTG 58.717 36.000 0.00 0.00 0.00 2.77
107 108 6.098124 AGACATGGTTTTGTTGAATCCTTTGA 59.902 34.615 0.00 0.00 0.00 2.69
108 109 6.048509 ACATGGTTTTGTTGAATCCTTTGAC 58.951 36.000 0.00 0.00 0.00 3.18
109 110 5.667539 TGGTTTTGTTGAATCCTTTGACA 57.332 34.783 0.00 0.00 0.00 3.58
110 111 5.415221 TGGTTTTGTTGAATCCTTTGACAC 58.585 37.500 0.00 0.00 0.00 3.67
111 112 5.186797 TGGTTTTGTTGAATCCTTTGACACT 59.813 36.000 0.00 0.00 0.00 3.55
112 113 6.378564 TGGTTTTGTTGAATCCTTTGACACTA 59.621 34.615 0.00 0.00 0.00 2.74
113 114 6.918022 GGTTTTGTTGAATCCTTTGACACTAG 59.082 38.462 0.00 0.00 0.00 2.57
114 115 7.201785 GGTTTTGTTGAATCCTTTGACACTAGA 60.202 37.037 0.00 0.00 0.00 2.43
115 116 6.861065 TTGTTGAATCCTTTGACACTAGAC 57.139 37.500 0.00 0.00 0.00 2.59
116 117 5.924356 TGTTGAATCCTTTGACACTAGACA 58.076 37.500 0.00 0.00 0.00 3.41
117 118 6.353323 TGTTGAATCCTTTGACACTAGACAA 58.647 36.000 0.00 0.00 0.00 3.18
118 119 6.826231 TGTTGAATCCTTTGACACTAGACAAA 59.174 34.615 0.00 5.65 37.13 2.83
119 120 6.861065 TGAATCCTTTGACACTAGACAAAC 57.139 37.500 0.00 0.00 35.15 2.93
120 121 5.465390 TGAATCCTTTGACACTAGACAAACG 59.535 40.000 0.00 1.54 35.15 3.60
121 122 4.395959 TCCTTTGACACTAGACAAACGT 57.604 40.909 0.00 0.00 35.15 3.99
122 123 4.116961 TCCTTTGACACTAGACAAACGTG 58.883 43.478 0.00 0.00 35.15 4.49
123 124 4.116961 CCTTTGACACTAGACAAACGTGA 58.883 43.478 0.00 0.00 35.15 4.35
124 125 4.025979 CCTTTGACACTAGACAAACGTGAC 60.026 45.833 0.00 0.00 35.15 3.67
125 126 3.786516 TGACACTAGACAAACGTGACA 57.213 42.857 0.00 0.00 32.62 3.58
126 127 4.316205 TGACACTAGACAAACGTGACAT 57.684 40.909 0.00 0.00 30.74 3.06
127 128 4.048504 TGACACTAGACAAACGTGACATG 58.951 43.478 0.00 0.00 30.74 3.21
128 129 4.202070 TGACACTAGACAAACGTGACATGA 60.202 41.667 0.00 0.00 30.74 3.07
129 130 4.299155 ACACTAGACAAACGTGACATGAG 58.701 43.478 0.00 0.00 33.13 2.90
130 131 3.675225 CACTAGACAAACGTGACATGAGG 59.325 47.826 0.00 0.00 0.00 3.86
131 132 2.169832 AGACAAACGTGACATGAGGG 57.830 50.000 0.00 0.00 0.00 4.30
132 133 1.156736 GACAAACGTGACATGAGGGG 58.843 55.000 0.00 0.00 0.00 4.79
133 134 0.250727 ACAAACGTGACATGAGGGGG 60.251 55.000 0.00 0.00 0.00 5.40
134 135 0.250727 CAAACGTGACATGAGGGGGT 60.251 55.000 0.00 0.00 0.00 4.95
135 136 0.036306 AAACGTGACATGAGGGGGTC 59.964 55.000 0.00 0.00 34.63 4.46
136 137 2.167398 AACGTGACATGAGGGGGTCG 62.167 60.000 0.00 0.00 36.83 4.79
137 138 2.348104 CGTGACATGAGGGGGTCGA 61.348 63.158 0.00 0.00 36.83 4.20
138 139 1.517832 GTGACATGAGGGGGTCGAG 59.482 63.158 0.00 0.00 36.83 4.04
139 140 1.685765 TGACATGAGGGGGTCGAGG 60.686 63.158 0.00 0.00 36.83 4.63
140 141 2.365635 ACATGAGGGGGTCGAGGG 60.366 66.667 0.00 0.00 0.00 4.30
141 142 2.365635 CATGAGGGGGTCGAGGGT 60.366 66.667 0.00 0.00 0.00 4.34
142 143 2.041819 ATGAGGGGGTCGAGGGTC 60.042 66.667 0.00 0.00 0.00 4.46
143 144 4.753662 TGAGGGGGTCGAGGGTCG 62.754 72.222 0.00 0.00 42.10 4.79
148 149 3.767806 GGGTCGAGGGTCGGGAAC 61.768 72.222 0.00 0.00 40.88 3.62
149 150 2.679287 GGTCGAGGGTCGGGAACT 60.679 66.667 0.00 0.00 40.88 3.01
150 151 1.379044 GGTCGAGGGTCGGGAACTA 60.379 63.158 0.00 0.00 40.88 2.24
151 152 1.382692 GGTCGAGGGTCGGGAACTAG 61.383 65.000 0.00 0.00 40.88 2.57
152 153 1.077212 TCGAGGGTCGGGAACTAGG 60.077 63.158 0.00 0.00 40.88 3.02
153 154 1.379576 CGAGGGTCGGGAACTAGGT 60.380 63.158 0.00 0.00 36.00 3.08
154 155 0.969409 CGAGGGTCGGGAACTAGGTT 60.969 60.000 0.00 0.00 36.00 3.50
155 156 1.683011 CGAGGGTCGGGAACTAGGTTA 60.683 57.143 0.00 0.00 36.00 2.85
156 157 2.030371 GAGGGTCGGGAACTAGGTTAG 58.970 57.143 0.00 0.00 0.00 2.34
157 158 1.642762 AGGGTCGGGAACTAGGTTAGA 59.357 52.381 0.00 0.00 0.00 2.10
158 159 2.030371 GGGTCGGGAACTAGGTTAGAG 58.970 57.143 0.00 0.00 0.00 2.43
159 160 2.030371 GGTCGGGAACTAGGTTAGAGG 58.970 57.143 0.00 0.00 0.00 3.69
160 161 2.030371 GTCGGGAACTAGGTTAGAGGG 58.970 57.143 0.00 0.00 0.00 4.30
161 162 1.642762 TCGGGAACTAGGTTAGAGGGT 59.357 52.381 0.00 0.00 0.00 4.34
162 163 2.030371 CGGGAACTAGGTTAGAGGGTC 58.970 57.143 0.00 0.00 0.00 4.46
163 164 2.030371 GGGAACTAGGTTAGAGGGTCG 58.970 57.143 0.00 0.00 0.00 4.79
164 165 2.622714 GGGAACTAGGTTAGAGGGTCGT 60.623 54.545 0.00 0.00 0.00 4.34
165 166 2.426381 GGAACTAGGTTAGAGGGTCGTG 59.574 54.545 0.00 0.00 0.00 4.35
166 167 2.140839 ACTAGGTTAGAGGGTCGTGG 57.859 55.000 0.00 0.00 0.00 4.94
167 168 1.637553 ACTAGGTTAGAGGGTCGTGGA 59.362 52.381 0.00 0.00 0.00 4.02
168 169 2.244252 ACTAGGTTAGAGGGTCGTGGAT 59.756 50.000 0.00 0.00 0.00 3.41
169 170 2.249309 AGGTTAGAGGGTCGTGGATT 57.751 50.000 0.00 0.00 0.00 3.01
170 171 1.831736 AGGTTAGAGGGTCGTGGATTG 59.168 52.381 0.00 0.00 0.00 2.67
171 172 1.653151 GTTAGAGGGTCGTGGATTGC 58.347 55.000 0.00 0.00 0.00 3.56
172 173 0.539986 TTAGAGGGTCGTGGATTGCC 59.460 55.000 0.00 0.00 0.00 4.52
173 174 1.672854 TAGAGGGTCGTGGATTGCCG 61.673 60.000 0.00 0.00 36.79 5.69
174 175 3.000819 AGGGTCGTGGATTGCCGA 61.001 61.111 0.00 0.00 36.79 5.54
175 176 2.511600 GGGTCGTGGATTGCCGAG 60.512 66.667 0.00 0.00 36.79 4.63
176 177 3.195698 GGTCGTGGATTGCCGAGC 61.196 66.667 0.00 0.00 43.15 5.03
177 178 3.554692 GTCGTGGATTGCCGAGCG 61.555 66.667 0.00 0.00 36.79 5.03
178 179 4.812476 TCGTGGATTGCCGAGCGG 62.812 66.667 4.20 4.20 36.79 5.52
180 181 3.195698 GTGGATTGCCGAGCGGTC 61.196 66.667 10.94 4.06 36.79 4.79
181 182 4.812476 TGGATTGCCGAGCGGTCG 62.812 66.667 28.88 28.88 46.39 4.79
199 200 1.080025 GAGGGTTCGAGGGTTGTCG 60.080 63.158 0.00 0.00 41.51 4.35
204 205 2.678934 TCGAGGGTTGTCGAGGGG 60.679 66.667 0.00 0.00 43.91 4.79
205 206 4.452733 CGAGGGTTGTCGAGGGGC 62.453 72.222 0.00 0.00 42.85 5.80
206 207 4.097361 GAGGGTTGTCGAGGGGCC 62.097 72.222 0.00 0.00 0.00 5.80
207 208 4.658786 AGGGTTGTCGAGGGGCCT 62.659 66.667 0.84 0.00 0.00 5.19
208 209 2.686106 GGGTTGTCGAGGGGCCTA 60.686 66.667 0.84 0.00 0.00 3.93
209 210 2.732619 GGGTTGTCGAGGGGCCTAG 61.733 68.421 0.84 0.00 0.00 3.02
210 211 2.732619 GGTTGTCGAGGGGCCTAGG 61.733 68.421 3.67 3.67 0.00 3.02
211 212 2.365105 TTGTCGAGGGGCCTAGGG 60.365 66.667 11.72 0.00 0.00 3.53
212 213 3.248248 TTGTCGAGGGGCCTAGGGT 62.248 63.158 11.72 0.00 0.00 4.34
213 214 2.365237 GTCGAGGGGCCTAGGGTT 60.365 66.667 11.72 0.00 0.00 4.11
214 215 2.042230 TCGAGGGGCCTAGGGTTC 60.042 66.667 11.72 0.00 0.00 3.62
215 216 3.537874 CGAGGGGCCTAGGGTTCG 61.538 72.222 11.72 0.00 0.00 3.95
216 217 2.042230 GAGGGGCCTAGGGTTCGA 60.042 66.667 11.72 0.00 0.00 3.71
217 218 2.041819 AGGGGCCTAGGGTTCGAG 60.042 66.667 11.72 0.00 0.00 4.04
218 219 3.162154 GGGGCCTAGGGTTCGAGG 61.162 72.222 11.72 0.00 38.60 4.63
219 220 3.162154 GGGCCTAGGGTTCGAGGG 61.162 72.222 11.72 0.00 36.45 4.30
220 221 2.365237 GGCCTAGGGTTCGAGGGT 60.365 66.667 11.72 0.00 36.45 4.34
221 222 2.433146 GGCCTAGGGTTCGAGGGTC 61.433 68.421 11.72 0.00 36.45 4.46
222 223 2.783288 GCCTAGGGTTCGAGGGTCG 61.783 68.421 11.72 0.00 42.10 4.79
230 231 3.437795 TCGAGGGTCGAGGAACGC 61.438 66.667 0.00 0.00 44.82 4.84
231 232 4.493747 CGAGGGTCGAGGAACGCC 62.494 72.222 0.00 0.00 43.74 5.68
232 233 4.493747 GAGGGTCGAGGAACGCCG 62.494 72.222 0.00 0.00 42.26 6.46
234 235 4.060038 GGGTCGAGGAACGCCGAA 62.060 66.667 0.00 0.00 39.49 4.30
235 236 2.506438 GGTCGAGGAACGCCGAAG 60.506 66.667 0.00 0.00 39.49 3.79
263 264 3.437795 TCGAGGGTCGAGGAACGC 61.438 66.667 0.00 0.00 44.82 4.84
264 265 3.441290 CGAGGGTCGAGGAACGCT 61.441 66.667 0.00 0.00 43.74 5.07
265 266 2.182030 GAGGGTCGAGGAACGCTG 59.818 66.667 0.00 0.00 41.93 5.18
267 268 2.182030 GGGTCGAGGAACGCTGAG 59.818 66.667 0.00 0.00 42.26 3.35
268 269 2.182030 GGTCGAGGAACGCTGAGG 59.818 66.667 0.00 0.00 42.26 3.86
269 270 2.182030 GTCGAGGAACGCTGAGGG 59.818 66.667 0.00 0.00 42.26 4.30
270 271 3.068691 TCGAGGAACGCTGAGGGG 61.069 66.667 0.51 0.00 42.26 4.79
271 272 3.382832 CGAGGAACGCTGAGGGGT 61.383 66.667 0.51 0.00 40.41 4.95
272 273 2.579738 GAGGAACGCTGAGGGGTC 59.420 66.667 5.94 5.94 37.65 4.46
274 275 3.379445 GGAACGCTGAGGGGTCGA 61.379 66.667 8.52 0.00 37.65 4.20
275 276 2.182030 GAACGCTGAGGGGTCGAG 59.818 66.667 0.00 0.00 37.65 4.04
276 277 3.358076 GAACGCTGAGGGGTCGAGG 62.358 68.421 0.00 0.00 37.65 4.63
279 280 3.462678 GCTGAGGGGTCGAGGGTC 61.463 72.222 0.00 0.00 0.00 4.46
280 281 3.141488 CTGAGGGGTCGAGGGTCG 61.141 72.222 0.00 0.00 42.10 4.79
288 289 2.033141 TCGAGGGTCGAGGAACGT 59.967 61.111 0.00 0.00 44.82 3.99
289 290 2.037136 TCGAGGGTCGAGGAACGTC 61.037 63.158 0.00 0.00 44.82 4.34
290 291 2.484203 GAGGGTCGAGGAACGTCG 59.516 66.667 10.03 10.03 43.13 5.12
291 292 2.033141 AGGGTCGAGGAACGTCGA 59.967 61.111 14.02 14.02 46.52 4.20
295 296 2.749044 TCGAGGAACGTCGAGGGG 60.749 66.667 14.02 0.00 43.91 4.79
296 297 3.060615 CGAGGAACGTCGAGGGGT 61.061 66.667 10.27 0.00 42.85 4.95
297 298 2.883621 GAGGAACGTCGAGGGGTC 59.116 66.667 10.27 6.32 0.00 4.46
298 299 1.975407 GAGGAACGTCGAGGGGTCA 60.975 63.158 10.27 0.00 0.00 4.02
299 300 1.530013 GAGGAACGTCGAGGGGTCAA 61.530 60.000 10.27 0.00 0.00 3.18
300 301 1.080025 GGAACGTCGAGGGGTCAAG 60.080 63.158 10.27 0.00 0.00 3.02
301 302 1.080025 GAACGTCGAGGGGTCAAGG 60.080 63.158 10.27 0.00 0.00 3.61
302 303 2.502692 GAACGTCGAGGGGTCAAGGG 62.503 65.000 10.27 0.00 0.00 3.95
303 304 4.452733 CGTCGAGGGGTCAAGGGC 62.453 72.222 0.00 0.00 0.00 5.19
304 305 4.097361 GTCGAGGGGTCAAGGGCC 62.097 72.222 0.00 0.00 0.00 5.80
314 315 4.994756 CAAGGGCCGCCAAGGGTT 62.995 66.667 12.58 0.00 41.48 4.11
315 316 4.678743 AAGGGCCGCCAAGGGTTC 62.679 66.667 12.58 0.00 41.48 3.62
320 357 4.778143 CCGCCAAGGGTTCGAGGG 62.778 72.222 0.00 0.00 35.97 4.30
356 393 3.207354 TCGAGGGTCGAGGATTGC 58.793 61.111 0.00 0.00 44.82 3.56
357 394 2.107141 CGAGGGTCGAGGATTGCC 59.893 66.667 0.00 0.00 43.74 4.52
358 395 2.107141 GAGGGTCGAGGATTGCCG 59.893 66.667 0.00 0.00 39.96 5.69
360 397 2.107141 GGGTCGAGGATTGCCGAG 59.893 66.667 0.00 0.00 39.96 4.63
365 404 2.506472 GAGGATTGCCGAGGGGTC 59.494 66.667 0.00 0.00 39.96 4.46
369 408 4.162690 ATTGCCGAGGGGTCGAGC 62.163 66.667 5.93 5.93 34.97 5.03
429 514 1.049289 GGGGTCGAGAGGTTGCCTAT 61.049 60.000 0.00 0.00 31.76 2.57
586 672 2.028203 GCAAAAGGCCTTCCAAATAGCA 60.028 45.455 20.79 0.00 36.11 3.49
661 747 1.202604 GGACTCCGTTCCAGAACAACA 60.203 52.381 10.90 0.00 41.20 3.33
675 761 5.342433 CAGAACAACATTGCAGAACTTCAA 58.658 37.500 0.00 0.00 0.00 2.69
688 774 1.538047 ACTTCAAACCATCATGCGCT 58.462 45.000 9.73 0.00 0.00 5.92
690 776 3.081061 ACTTCAAACCATCATGCGCTTA 58.919 40.909 9.73 0.00 0.00 3.09
717 803 6.582636 ACTTTCGCCTAATGATGAAGACATA 58.417 36.000 0.00 0.00 36.82 2.29
749 835 6.353323 TGAATCCTTTGACACTAGACAAACA 58.647 36.000 0.00 0.00 35.15 2.83
806 894 2.438392 GGGTCGAGGGTCCAGATTTATT 59.562 50.000 0.00 0.00 0.00 1.40
820 909 5.602145 CCAGATTTATTAAGAATGCCCCCAA 59.398 40.000 0.00 0.00 0.00 4.12
923 1013 3.332385 GGCCACCCCGAACCCTAA 61.332 66.667 0.00 0.00 0.00 2.69
938 1028 0.953960 CCTAAAAGCGTTGCCGAGGT 60.954 55.000 0.00 0.00 35.63 3.85
952 1042 3.157680 AGGTCACCCCAAACCTCG 58.842 61.111 0.00 0.00 42.28 4.63
1000 1090 2.678580 TCCGTGTGCCGAGGATCA 60.679 61.111 0.00 0.00 39.56 2.92
1422 1516 3.777106 AGTGCACTCTCAATTCAGGAA 57.223 42.857 15.25 0.00 0.00 3.36
1500 1594 0.107508 ATGACTATGCAGCCGCTTGT 60.108 50.000 0.00 0.00 39.64 3.16
1594 1699 5.510671 CAACAAAGTTTTCACTCTGCGTAT 58.489 37.500 0.00 0.00 30.45 3.06
1619 1728 2.552743 GCTGGTAGTTCCTGTTTTGGTC 59.447 50.000 0.00 0.00 37.45 4.02
1664 1786 5.588648 TGGTTATTTTCTGTAGTATGCCTGC 59.411 40.000 0.00 0.00 0.00 4.85
1671 1793 3.960755 TCTGTAGTATGCCTGCTACATGT 59.039 43.478 17.54 2.69 45.65 3.21
1693 1824 3.823873 TCGGTTTGGTCATTGCTAAATGT 59.176 39.130 0.00 0.00 43.21 2.71
1748 1892 5.441718 ACCCTGATATGTTGATGTTGTCT 57.558 39.130 0.00 0.00 0.00 3.41
1781 1933 7.401493 AGAGAAGATCCCTGAAAATGAGAAGTA 59.599 37.037 0.00 0.00 0.00 2.24
1808 1960 7.972832 TGGATATGTTTACGTTTCTGACTTT 57.027 32.000 0.00 0.00 0.00 2.66
1819 1971 7.272037 ACGTTTCTGACTTTTGTGGAATATT 57.728 32.000 0.00 0.00 0.00 1.28
1920 2121 9.199982 CCAAAATTTATCTATCATGCATGTTCC 57.800 33.333 25.43 0.00 0.00 3.62
1970 2171 9.046296 GTTCCATCATACTCCTATGTTACTTTG 57.954 37.037 0.00 0.00 32.76 2.77
1971 2172 8.319057 TCCATCATACTCCTATGTTACTTTGT 57.681 34.615 0.00 0.00 32.76 2.83
1973 2174 9.396022 CCATCATACTCCTATGTTACTTTGTTT 57.604 33.333 0.00 0.00 32.76 2.83
2019 2220 8.706322 AAGTAAATTTCTAATGGGTGTCTGTT 57.294 30.769 0.00 0.00 0.00 3.16
2021 2222 9.143155 AGTAAATTTCTAATGGGTGTCTGTTTT 57.857 29.630 0.00 0.00 0.00 2.43
2022 2223 9.758651 GTAAATTTCTAATGGGTGTCTGTTTTT 57.241 29.630 0.00 0.00 0.00 1.94
2059 2260 8.361169 TGATTTCTTTACCATTTTCCCTAAGG 57.639 34.615 0.00 0.00 0.00 2.69
2069 2270 7.290813 ACCATTTTCCCTAAGGATCTATTGTC 58.709 38.462 0.00 0.00 43.54 3.18
2071 2272 7.663493 CCATTTTCCCTAAGGATCTATTGTCTC 59.337 40.741 0.00 0.00 43.54 3.36
2072 2273 6.749036 TTTCCCTAAGGATCTATTGTCTCC 57.251 41.667 0.00 0.00 43.54 3.71
2073 2274 5.688220 TCCCTAAGGATCTATTGTCTCCT 57.312 43.478 0.00 0.00 41.19 3.69
2095 2296 9.892130 CTCCTTTTCTAATTACCATAGTTGAGT 57.108 33.333 0.00 0.00 0.00 3.41
2128 2329 8.255394 AGTTGTGAATTTTCAAGTTGGAAAAG 57.745 30.769 13.30 0.00 46.45 2.27
2129 2330 8.093927 AGTTGTGAATTTTCAAGTTGGAAAAGA 58.906 29.630 13.30 0.00 46.45 2.52
2130 2331 8.882736 GTTGTGAATTTTCAAGTTGGAAAAGAT 58.117 29.630 13.30 3.40 46.45 2.40
2163 2364 4.910304 ACCTATCTGGGACTAAAGCATGAT 59.090 41.667 0.00 0.00 41.11 2.45
2168 2369 4.345257 TCTGGGACTAAAGCATGATCTACC 59.655 45.833 0.00 0.00 0.00 3.18
2169 2370 4.037222 TGGGACTAAAGCATGATCTACCA 58.963 43.478 0.00 0.00 0.00 3.25
2170 2371 4.473196 TGGGACTAAAGCATGATCTACCAA 59.527 41.667 0.00 0.00 0.00 3.67
2173 2374 6.016777 GGGACTAAAGCATGATCTACCAAATG 60.017 42.308 0.00 0.00 0.00 2.32
2203 2404 8.885693 AGCCTTATCATATACATCTGTCAGTA 57.114 34.615 0.00 0.00 0.00 2.74
2210 2411 8.753497 TCATATACATCTGTCAGTAGTCAGTT 57.247 34.615 0.00 0.00 33.44 3.16
2213 2414 5.384063 ACATCTGTCAGTAGTCAGTTGAG 57.616 43.478 0.00 0.00 35.53 3.02
2220 2421 4.924462 GTCAGTAGTCAGTTGAGCTAAACC 59.076 45.833 10.57 0.00 0.00 3.27
2222 2423 2.457366 AGTCAGTTGAGCTAAACCGG 57.543 50.000 10.57 0.00 0.00 5.28
2223 2424 0.796927 GTCAGTTGAGCTAAACCGGC 59.203 55.000 10.57 0.00 0.00 6.13
2226 2427 1.375013 GTTGAGCTAAACCGGCGGA 60.375 57.895 35.78 9.74 34.52 5.54
2227 2428 1.079405 TTGAGCTAAACCGGCGGAG 60.079 57.895 35.78 21.13 34.52 4.63
2305 2514 7.066404 GGAAGGTGAGGAAGAAAAGAATATGAC 59.934 40.741 0.00 0.00 0.00 3.06
2313 2522 7.398332 AGGAAGAAAAGAATATGACAATTGGCT 59.602 33.333 13.62 0.48 0.00 4.75
2338 2550 0.538287 AAGCTGCTTGGACCAAGGAC 60.538 55.000 30.87 22.45 41.31 3.85
2366 2578 6.758886 AGTTCTTTGTTCTTGTCTGTCTACTG 59.241 38.462 0.00 0.00 0.00 2.74
2373 2585 5.188327 TCTTGTCTGTCTACTGTTCAGTG 57.812 43.478 14.69 6.04 0.00 3.66
2374 2586 3.371102 TGTCTGTCTACTGTTCAGTGC 57.629 47.619 14.69 6.44 0.00 4.40
2414 2626 7.564660 ACCATATCCATTCACAAAACCACATAT 59.435 33.333 0.00 0.00 0.00 1.78
2426 2638 9.868277 CACAAAACCACATATATATGTTTTGGT 57.132 29.630 31.46 27.38 43.99 3.67
2453 2665 6.734137 CAAAACTAGCCAATGTGAAACTGTA 58.266 36.000 0.00 0.00 38.04 2.74
2454 2666 6.560253 AAACTAGCCAATGTGAAACTGTAG 57.440 37.500 0.00 0.00 38.04 2.74
2455 2667 5.483685 ACTAGCCAATGTGAAACTGTAGA 57.516 39.130 0.00 0.00 38.04 2.59
2456 2668 6.054860 ACTAGCCAATGTGAAACTGTAGAT 57.945 37.500 0.00 0.00 38.04 1.98
2457 2669 6.476378 ACTAGCCAATGTGAAACTGTAGATT 58.524 36.000 0.00 0.00 38.04 2.40
2458 2670 6.942576 ACTAGCCAATGTGAAACTGTAGATTT 59.057 34.615 0.00 0.00 38.04 2.17
2459 2671 8.100791 ACTAGCCAATGTGAAACTGTAGATTTA 58.899 33.333 0.00 0.00 38.04 1.40
2460 2672 7.759489 AGCCAATGTGAAACTGTAGATTTAA 57.241 32.000 0.00 0.00 38.04 1.52
2461 2673 7.820648 AGCCAATGTGAAACTGTAGATTTAAG 58.179 34.615 0.00 0.00 38.04 1.85
2462 2674 7.665559 AGCCAATGTGAAACTGTAGATTTAAGA 59.334 33.333 0.00 0.00 38.04 2.10
2463 2675 8.296713 GCCAATGTGAAACTGTAGATTTAAGAA 58.703 33.333 0.00 0.00 38.04 2.52
2467 2679 7.739295 TGTGAAACTGTAGATTTAAGAATCGC 58.261 34.615 0.00 0.00 41.56 4.58
2468 2680 7.386573 TGTGAAACTGTAGATTTAAGAATCGCA 59.613 33.333 0.00 0.00 41.56 5.10
2469 2681 8.227791 GTGAAACTGTAGATTTAAGAATCGCAA 58.772 33.333 0.00 0.00 45.10 4.85
2470 2682 8.779303 TGAAACTGTAGATTTAAGAATCGCAAA 58.221 29.630 0.00 0.00 45.10 3.68
2471 2683 9.267096 GAAACTGTAGATTTAAGAATCGCAAAG 57.733 33.333 0.00 0.00 45.10 2.77
2472 2684 6.776094 ACTGTAGATTTAAGAATCGCAAAGC 58.224 36.000 0.00 0.00 45.10 3.51
2473 2685 6.119144 TGTAGATTTAAGAATCGCAAAGCC 57.881 37.500 0.00 0.00 45.10 4.35
2474 2686 5.645929 TGTAGATTTAAGAATCGCAAAGCCA 59.354 36.000 0.00 0.00 45.10 4.75
2475 2687 4.986622 AGATTTAAGAATCGCAAAGCCAC 58.013 39.130 0.00 0.00 45.10 5.01
2476 2688 4.458989 AGATTTAAGAATCGCAAAGCCACA 59.541 37.500 0.00 0.00 45.10 4.17
2477 2689 4.576216 TTTAAGAATCGCAAAGCCACAA 57.424 36.364 0.00 0.00 0.00 3.33
2478 2690 4.576216 TTAAGAATCGCAAAGCCACAAA 57.424 36.364 0.00 0.00 0.00 2.83
2479 2691 3.451141 AAGAATCGCAAAGCCACAAAA 57.549 38.095 0.00 0.00 0.00 2.44
2480 2692 3.665745 AGAATCGCAAAGCCACAAAAT 57.334 38.095 0.00 0.00 0.00 1.82
2481 2693 3.993920 AGAATCGCAAAGCCACAAAATT 58.006 36.364 0.00 0.00 0.00 1.82
2482 2694 3.989817 AGAATCGCAAAGCCACAAAATTC 59.010 39.130 0.00 0.00 0.00 2.17
2483 2695 2.879002 TCGCAAAGCCACAAAATTCA 57.121 40.000 0.00 0.00 0.00 2.57
2484 2696 2.741612 TCGCAAAGCCACAAAATTCAG 58.258 42.857 0.00 0.00 0.00 3.02
2485 2697 2.360483 TCGCAAAGCCACAAAATTCAGA 59.640 40.909 0.00 0.00 0.00 3.27
2486 2698 2.472488 CGCAAAGCCACAAAATTCAGAC 59.528 45.455 0.00 0.00 0.00 3.51
2487 2699 2.802247 GCAAAGCCACAAAATTCAGACC 59.198 45.455 0.00 0.00 0.00 3.85
2488 2700 3.740764 GCAAAGCCACAAAATTCAGACCA 60.741 43.478 0.00 0.00 0.00 4.02
2489 2701 3.733443 AAGCCACAAAATTCAGACCAC 57.267 42.857 0.00 0.00 0.00 4.16
2490 2702 2.949447 AGCCACAAAATTCAGACCACT 58.051 42.857 0.00 0.00 0.00 4.00
2491 2703 3.299503 AGCCACAAAATTCAGACCACTT 58.700 40.909 0.00 0.00 0.00 3.16
2492 2704 3.706086 AGCCACAAAATTCAGACCACTTT 59.294 39.130 0.00 0.00 0.00 2.66
2493 2705 3.803778 GCCACAAAATTCAGACCACTTTG 59.196 43.478 0.00 0.00 34.04 2.77
2494 2706 4.680440 GCCACAAAATTCAGACCACTTTGT 60.680 41.667 0.00 0.00 40.01 2.83
2495 2707 5.418676 CCACAAAATTCAGACCACTTTGTT 58.581 37.500 0.00 0.00 37.95 2.83
2496 2708 5.291614 CCACAAAATTCAGACCACTTTGTTG 59.708 40.000 0.00 0.00 37.95 3.33
2497 2709 4.869861 ACAAAATTCAGACCACTTTGTTGC 59.130 37.500 0.00 0.00 36.98 4.17
2498 2710 5.111293 CAAAATTCAGACCACTTTGTTGCT 58.889 37.500 0.00 0.00 0.00 3.91
2499 2711 5.343307 AAATTCAGACCACTTTGTTGCTT 57.657 34.783 0.00 0.00 0.00 3.91
2500 2712 5.343307 AATTCAGACCACTTTGTTGCTTT 57.657 34.783 0.00 0.00 0.00 3.51
2501 2713 3.781079 TCAGACCACTTTGTTGCTTTG 57.219 42.857 0.00 0.00 0.00 2.77
2502 2714 3.351740 TCAGACCACTTTGTTGCTTTGA 58.648 40.909 0.00 0.00 0.00 2.69
2503 2715 3.761218 TCAGACCACTTTGTTGCTTTGAA 59.239 39.130 0.00 0.00 0.00 2.69
2504 2716 3.859386 CAGACCACTTTGTTGCTTTGAAC 59.141 43.478 0.00 0.00 0.00 3.18
2505 2717 3.763897 AGACCACTTTGTTGCTTTGAACT 59.236 39.130 0.00 0.00 0.00 3.01
2506 2718 3.848726 ACCACTTTGTTGCTTTGAACTG 58.151 40.909 0.00 0.00 0.00 3.16
2507 2719 3.509575 ACCACTTTGTTGCTTTGAACTGA 59.490 39.130 0.00 0.00 0.00 3.41
2508 2720 3.859386 CCACTTTGTTGCTTTGAACTGAC 59.141 43.478 0.00 0.00 0.00 3.51
2509 2721 3.859386 CACTTTGTTGCTTTGAACTGACC 59.141 43.478 0.00 0.00 0.00 4.02
2510 2722 3.763897 ACTTTGTTGCTTTGAACTGACCT 59.236 39.130 0.00 0.00 0.00 3.85
2511 2723 4.947388 ACTTTGTTGCTTTGAACTGACCTA 59.053 37.500 0.00 0.00 0.00 3.08
2512 2724 5.594317 ACTTTGTTGCTTTGAACTGACCTAT 59.406 36.000 0.00 0.00 0.00 2.57
2513 2725 6.770785 ACTTTGTTGCTTTGAACTGACCTATA 59.229 34.615 0.00 0.00 0.00 1.31
2514 2726 7.284489 ACTTTGTTGCTTTGAACTGACCTATAA 59.716 33.333 0.00 0.00 0.00 0.98
2515 2727 6.801539 TGTTGCTTTGAACTGACCTATAAG 57.198 37.500 0.00 0.00 0.00 1.73
2516 2728 5.181245 TGTTGCTTTGAACTGACCTATAAGC 59.819 40.000 0.00 0.00 37.58 3.09
2517 2729 5.165961 TGCTTTGAACTGACCTATAAGCT 57.834 39.130 0.00 0.00 37.85 3.74
2518 2730 6.294361 TGCTTTGAACTGACCTATAAGCTA 57.706 37.500 0.00 0.00 37.85 3.32
2519 2731 6.889198 TGCTTTGAACTGACCTATAAGCTAT 58.111 36.000 0.00 0.00 37.85 2.97
2520 2732 7.338710 TGCTTTGAACTGACCTATAAGCTATT 58.661 34.615 0.00 0.00 37.85 1.73
2521 2733 7.280876 TGCTTTGAACTGACCTATAAGCTATTG 59.719 37.037 0.00 0.00 37.85 1.90
2522 2734 7.553881 TTTGAACTGACCTATAAGCTATTGC 57.446 36.000 0.00 0.00 40.05 3.56
2523 2735 6.233905 TGAACTGACCTATAAGCTATTGCA 57.766 37.500 1.12 0.00 42.74 4.08
2524 2736 6.830912 TGAACTGACCTATAAGCTATTGCAT 58.169 36.000 1.12 0.00 42.74 3.96
2525 2737 6.707608 TGAACTGACCTATAAGCTATTGCATG 59.292 38.462 1.12 0.00 42.74 4.06
2526 2738 5.555017 ACTGACCTATAAGCTATTGCATGG 58.445 41.667 1.12 0.00 42.74 3.66
2527 2739 4.326826 TGACCTATAAGCTATTGCATGGC 58.673 43.478 1.12 0.00 42.74 4.40
2528 2740 4.202451 TGACCTATAAGCTATTGCATGGCA 60.202 41.667 1.12 0.00 42.74 4.92
2529 2741 4.927049 ACCTATAAGCTATTGCATGGCAT 58.073 39.130 1.12 0.00 42.74 4.40
2530 2742 5.327732 ACCTATAAGCTATTGCATGGCATT 58.672 37.500 0.00 0.00 42.74 3.56
2531 2743 5.184479 ACCTATAAGCTATTGCATGGCATTG 59.816 40.000 0.00 0.00 42.74 2.82
2532 2744 2.234300 AAGCTATTGCATGGCATTGC 57.766 45.000 12.90 12.90 42.74 3.56
2533 2745 0.391597 AGCTATTGCATGGCATTGCC 59.608 50.000 21.12 21.12 45.44 4.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 3.225177 TGGAACGGAGTCCTAGATAGG 57.775 52.381 7.77 0.00 45.00 2.57
5 6 5.105473 TGTTTTGGAACGGAGTCCTAGATAG 60.105 44.000 7.77 0.00 45.00 2.08
6 7 4.773674 TGTTTTGGAACGGAGTCCTAGATA 59.226 41.667 7.77 0.00 45.00 1.98
7 8 3.581332 TGTTTTGGAACGGAGTCCTAGAT 59.419 43.478 7.77 0.00 45.00 1.98
8 9 2.967201 TGTTTTGGAACGGAGTCCTAGA 59.033 45.455 7.77 0.00 45.00 2.43
9 10 3.396260 TGTTTTGGAACGGAGTCCTAG 57.604 47.619 7.77 0.00 45.00 3.02
10 11 3.135167 AGTTGTTTTGGAACGGAGTCCTA 59.865 43.478 7.77 0.00 45.00 2.94
11 12 2.092592 AGTTGTTTTGGAACGGAGTCCT 60.093 45.455 7.77 0.00 45.00 3.85
12 13 2.294979 AGTTGTTTTGGAACGGAGTCC 58.705 47.619 0.00 0.00 45.00 3.85
13 14 4.102649 CAAAGTTGTTTTGGAACGGAGTC 58.897 43.478 0.00 0.00 40.92 3.36
14 15 3.759618 TCAAAGTTGTTTTGGAACGGAGT 59.240 39.130 0.37 0.00 45.04 3.85
15 16 4.364415 TCAAAGTTGTTTTGGAACGGAG 57.636 40.909 0.37 0.00 45.05 4.63
16 17 4.459685 TCTTCAAAGTTGTTTTGGAACGGA 59.540 37.500 0.37 0.00 45.05 4.69
17 18 4.739195 TCTTCAAAGTTGTTTTGGAACGG 58.261 39.130 0.37 0.00 45.05 4.44
18 19 4.265320 GCTCTTCAAAGTTGTTTTGGAACG 59.735 41.667 0.37 0.00 45.05 3.95
19 20 5.410924 AGCTCTTCAAAGTTGTTTTGGAAC 58.589 37.500 0.37 0.00 45.05 3.62
20 21 5.659440 AGCTCTTCAAAGTTGTTTTGGAA 57.341 34.783 0.37 0.00 45.05 3.53
21 22 5.650543 GAAGCTCTTCAAAGTTGTTTTGGA 58.349 37.500 4.85 0.00 45.05 3.53
22 23 4.500477 CGAAGCTCTTCAAAGTTGTTTTGG 59.500 41.667 9.92 0.00 45.05 3.28
23 24 5.095490 ACGAAGCTCTTCAAAGTTGTTTTG 58.905 37.500 9.92 0.00 46.09 2.44
24 25 5.310720 ACGAAGCTCTTCAAAGTTGTTTT 57.689 34.783 9.92 0.00 39.46 2.43
25 26 4.965119 ACGAAGCTCTTCAAAGTTGTTT 57.035 36.364 9.92 0.00 39.46 2.83
26 27 4.272748 GGTACGAAGCTCTTCAAAGTTGTT 59.727 41.667 9.92 0.00 39.46 2.83
27 28 3.808174 GGTACGAAGCTCTTCAAAGTTGT 59.192 43.478 9.92 1.78 39.46 3.32
28 29 3.807622 TGGTACGAAGCTCTTCAAAGTTG 59.192 43.478 9.92 0.00 39.46 3.16
29 30 4.067972 TGGTACGAAGCTCTTCAAAGTT 57.932 40.909 9.92 0.00 39.46 2.66
30 31 3.746045 TGGTACGAAGCTCTTCAAAGT 57.254 42.857 9.92 3.00 39.46 2.66
31 32 4.245660 TGATGGTACGAAGCTCTTCAAAG 58.754 43.478 9.92 0.00 39.46 2.77
32 33 4.265904 TGATGGTACGAAGCTCTTCAAA 57.734 40.909 9.92 0.00 39.46 2.69
33 34 3.953712 TGATGGTACGAAGCTCTTCAA 57.046 42.857 9.92 0.00 39.46 2.69
34 35 3.785486 CATGATGGTACGAAGCTCTTCA 58.215 45.455 9.92 0.00 39.46 3.02
35 36 2.541762 GCATGATGGTACGAAGCTCTTC 59.458 50.000 0.00 0.00 36.29 2.87
36 37 2.093500 TGCATGATGGTACGAAGCTCTT 60.093 45.455 0.00 0.00 0.00 2.85
37 38 1.482182 TGCATGATGGTACGAAGCTCT 59.518 47.619 0.00 0.00 0.00 4.09
38 39 1.594862 GTGCATGATGGTACGAAGCTC 59.405 52.381 0.00 0.00 0.00 4.09
39 40 1.656652 GTGCATGATGGTACGAAGCT 58.343 50.000 0.00 0.00 0.00 3.74
40 41 0.657840 GGTGCATGATGGTACGAAGC 59.342 55.000 0.00 0.00 0.00 3.86
41 42 1.935873 CAGGTGCATGATGGTACGAAG 59.064 52.381 0.00 0.00 0.00 3.79
42 43 1.277842 ACAGGTGCATGATGGTACGAA 59.722 47.619 0.00 0.00 0.00 3.85
43 44 0.901827 ACAGGTGCATGATGGTACGA 59.098 50.000 0.00 0.00 0.00 3.43
44 45 1.737838 AACAGGTGCATGATGGTACG 58.262 50.000 0.00 0.00 0.00 3.67
45 46 3.873910 AGTAACAGGTGCATGATGGTAC 58.126 45.455 13.23 13.23 37.38 3.34
46 47 4.568072 AAGTAACAGGTGCATGATGGTA 57.432 40.909 0.00 0.00 0.00 3.25
47 48 3.439857 AAGTAACAGGTGCATGATGGT 57.560 42.857 0.00 0.00 0.00 3.55
48 49 3.181507 CGAAAGTAACAGGTGCATGATGG 60.182 47.826 0.00 0.00 0.00 3.51
49 50 3.728864 GCGAAAGTAACAGGTGCATGATG 60.729 47.826 0.00 0.00 0.00 3.07
50 51 2.420022 GCGAAAGTAACAGGTGCATGAT 59.580 45.455 0.00 0.00 0.00 2.45
51 52 1.804151 GCGAAAGTAACAGGTGCATGA 59.196 47.619 0.00 0.00 0.00 3.07
52 53 1.135689 GGCGAAAGTAACAGGTGCATG 60.136 52.381 0.00 0.00 0.00 4.06
53 54 1.165270 GGCGAAAGTAACAGGTGCAT 58.835 50.000 0.00 0.00 0.00 3.96
54 55 0.107831 AGGCGAAAGTAACAGGTGCA 59.892 50.000 0.00 0.00 0.00 4.57
55 56 2.088950 TAGGCGAAAGTAACAGGTGC 57.911 50.000 0.00 0.00 0.00 5.01
56 57 4.250464 TCATTAGGCGAAAGTAACAGGTG 58.750 43.478 0.00 0.00 0.00 4.00
57 58 4.546829 TCATTAGGCGAAAGTAACAGGT 57.453 40.909 0.00 0.00 0.00 4.00
58 59 5.116180 TCATCATTAGGCGAAAGTAACAGG 58.884 41.667 0.00 0.00 0.00 4.00
59 60 6.535150 TCTTCATCATTAGGCGAAAGTAACAG 59.465 38.462 0.00 0.00 0.00 3.16
60 61 6.312918 GTCTTCATCATTAGGCGAAAGTAACA 59.687 38.462 0.00 0.00 0.00 2.41
61 62 6.312918 TGTCTTCATCATTAGGCGAAAGTAAC 59.687 38.462 0.00 0.00 0.00 2.50
62 63 6.403049 TGTCTTCATCATTAGGCGAAAGTAA 58.597 36.000 0.00 0.00 0.00 2.24
63 64 5.972935 TGTCTTCATCATTAGGCGAAAGTA 58.027 37.500 0.00 0.00 0.00 2.24
64 65 4.832248 TGTCTTCATCATTAGGCGAAAGT 58.168 39.130 0.00 0.00 0.00 2.66
65 66 5.277683 CCATGTCTTCATCATTAGGCGAAAG 60.278 44.000 0.00 0.00 31.15 2.62
66 67 4.576053 CCATGTCTTCATCATTAGGCGAAA 59.424 41.667 0.00 0.00 31.15 3.46
67 68 4.129380 CCATGTCTTCATCATTAGGCGAA 58.871 43.478 0.00 0.00 31.15 4.70
68 69 3.134623 ACCATGTCTTCATCATTAGGCGA 59.865 43.478 0.00 0.00 31.15 5.54
69 70 3.470709 ACCATGTCTTCATCATTAGGCG 58.529 45.455 0.00 0.00 31.15 5.52
70 71 5.841957 AAACCATGTCTTCATCATTAGGC 57.158 39.130 0.00 0.00 31.15 3.93
71 72 7.161773 ACAAAACCATGTCTTCATCATTAGG 57.838 36.000 0.00 0.00 31.15 2.69
72 73 8.298854 TCAACAAAACCATGTCTTCATCATTAG 58.701 33.333 0.00 0.00 31.81 1.73
73 74 8.175925 TCAACAAAACCATGTCTTCATCATTA 57.824 30.769 0.00 0.00 31.81 1.90
74 75 7.053316 TCAACAAAACCATGTCTTCATCATT 57.947 32.000 0.00 0.00 31.81 2.57
75 76 6.653526 TCAACAAAACCATGTCTTCATCAT 57.346 33.333 0.00 0.00 31.81 2.45
76 77 6.462552 TTCAACAAAACCATGTCTTCATCA 57.537 33.333 0.00 0.00 31.81 3.07
77 78 6.587608 GGATTCAACAAAACCATGTCTTCATC 59.412 38.462 0.00 0.00 31.81 2.92
78 79 6.268387 AGGATTCAACAAAACCATGTCTTCAT 59.732 34.615 0.00 0.00 31.81 2.57
79 80 5.598005 AGGATTCAACAAAACCATGTCTTCA 59.402 36.000 0.00 0.00 31.81 3.02
80 81 6.089249 AGGATTCAACAAAACCATGTCTTC 57.911 37.500 0.00 0.00 31.81 2.87
81 82 6.484364 AAGGATTCAACAAAACCATGTCTT 57.516 33.333 0.00 0.00 31.81 3.01
82 83 6.098124 TCAAAGGATTCAACAAAACCATGTCT 59.902 34.615 0.00 0.00 31.81 3.41
83 84 6.200854 GTCAAAGGATTCAACAAAACCATGTC 59.799 38.462 0.00 0.00 31.81 3.06
84 85 6.048509 GTCAAAGGATTCAACAAAACCATGT 58.951 36.000 0.00 0.00 34.24 3.21
85 86 6.018832 GTGTCAAAGGATTCAACAAAACCATG 60.019 38.462 0.00 0.00 0.00 3.66
86 87 6.048509 GTGTCAAAGGATTCAACAAAACCAT 58.951 36.000 0.00 0.00 0.00 3.55
87 88 5.186797 AGTGTCAAAGGATTCAACAAAACCA 59.813 36.000 0.00 0.00 0.00 3.67
88 89 5.660460 AGTGTCAAAGGATTCAACAAAACC 58.340 37.500 0.00 0.00 0.00 3.27
89 90 7.644157 GTCTAGTGTCAAAGGATTCAACAAAAC 59.356 37.037 0.00 0.00 0.00 2.43
90 91 7.338196 TGTCTAGTGTCAAAGGATTCAACAAAA 59.662 33.333 0.00 0.00 0.00 2.44
91 92 6.826231 TGTCTAGTGTCAAAGGATTCAACAAA 59.174 34.615 0.00 0.00 0.00 2.83
92 93 6.353323 TGTCTAGTGTCAAAGGATTCAACAA 58.647 36.000 0.00 0.00 0.00 2.83
93 94 5.924356 TGTCTAGTGTCAAAGGATTCAACA 58.076 37.500 0.00 0.00 0.00 3.33
94 95 6.861065 TTGTCTAGTGTCAAAGGATTCAAC 57.139 37.500 0.00 0.00 0.00 3.18
95 96 6.018262 CGTTTGTCTAGTGTCAAAGGATTCAA 60.018 38.462 16.82 0.00 38.42 2.69
96 97 5.465390 CGTTTGTCTAGTGTCAAAGGATTCA 59.535 40.000 16.82 0.00 38.42 2.57
97 98 5.465724 ACGTTTGTCTAGTGTCAAAGGATTC 59.534 40.000 22.76 9.29 38.42 2.52
98 99 5.236478 CACGTTTGTCTAGTGTCAAAGGATT 59.764 40.000 22.76 9.95 38.42 3.01
99 100 4.750098 CACGTTTGTCTAGTGTCAAAGGAT 59.250 41.667 22.76 12.79 38.42 3.24
100 101 4.116961 CACGTTTGTCTAGTGTCAAAGGA 58.883 43.478 22.76 2.84 38.42 3.36
101 102 4.025979 GTCACGTTTGTCTAGTGTCAAAGG 60.026 45.833 18.50 18.50 40.30 3.11
102 103 4.565166 TGTCACGTTTGTCTAGTGTCAAAG 59.435 41.667 9.41 7.55 37.20 2.77
103 104 4.496360 TGTCACGTTTGTCTAGTGTCAAA 58.504 39.130 0.00 0.00 37.20 2.69
104 105 4.112716 TGTCACGTTTGTCTAGTGTCAA 57.887 40.909 0.00 0.00 37.20 3.18
105 106 3.786516 TGTCACGTTTGTCTAGTGTCA 57.213 42.857 0.00 0.00 37.20 3.58
106 107 4.295870 TCATGTCACGTTTGTCTAGTGTC 58.704 43.478 0.00 0.00 37.20 3.67
107 108 4.299155 CTCATGTCACGTTTGTCTAGTGT 58.701 43.478 0.00 0.00 37.20 3.55
108 109 3.675225 CCTCATGTCACGTTTGTCTAGTG 59.325 47.826 0.00 0.00 37.24 2.74
109 110 3.306088 CCCTCATGTCACGTTTGTCTAGT 60.306 47.826 0.00 0.00 0.00 2.57
110 111 3.254060 CCCTCATGTCACGTTTGTCTAG 58.746 50.000 0.00 0.00 0.00 2.43
111 112 2.028476 CCCCTCATGTCACGTTTGTCTA 60.028 50.000 0.00 0.00 0.00 2.59
112 113 1.270839 CCCCTCATGTCACGTTTGTCT 60.271 52.381 0.00 0.00 0.00 3.41
113 114 1.156736 CCCCTCATGTCACGTTTGTC 58.843 55.000 0.00 0.00 0.00 3.18
114 115 0.250727 CCCCCTCATGTCACGTTTGT 60.251 55.000 0.00 0.00 0.00 2.83
115 116 0.250727 ACCCCCTCATGTCACGTTTG 60.251 55.000 0.00 0.00 0.00 2.93
116 117 0.036306 GACCCCCTCATGTCACGTTT 59.964 55.000 0.00 0.00 0.00 3.60
117 118 1.677552 GACCCCCTCATGTCACGTT 59.322 57.895 0.00 0.00 0.00 3.99
118 119 2.646175 CGACCCCCTCATGTCACGT 61.646 63.158 0.00 0.00 0.00 4.49
119 120 2.184322 CGACCCCCTCATGTCACG 59.816 66.667 0.00 0.00 0.00 4.35
120 121 1.517832 CTCGACCCCCTCATGTCAC 59.482 63.158 0.00 0.00 0.00 3.67
121 122 1.685765 CCTCGACCCCCTCATGTCA 60.686 63.158 0.00 0.00 0.00 3.58
122 123 2.435693 CCCTCGACCCCCTCATGTC 61.436 68.421 0.00 0.00 0.00 3.06
123 124 2.365635 CCCTCGACCCCCTCATGT 60.366 66.667 0.00 0.00 0.00 3.21
124 125 2.365635 ACCCTCGACCCCCTCATG 60.366 66.667 0.00 0.00 0.00 3.07
125 126 2.041819 GACCCTCGACCCCCTCAT 60.042 66.667 0.00 0.00 0.00 2.90
126 127 4.753662 CGACCCTCGACCCCCTCA 62.754 72.222 0.00 0.00 43.74 3.86
131 132 2.843912 TAGTTCCCGACCCTCGACCC 62.844 65.000 0.00 0.00 43.74 4.46
132 133 1.379044 TAGTTCCCGACCCTCGACC 60.379 63.158 0.00 0.00 43.74 4.79
133 134 1.382692 CCTAGTTCCCGACCCTCGAC 61.383 65.000 0.00 0.00 43.74 4.20
134 135 1.077212 CCTAGTTCCCGACCCTCGA 60.077 63.158 0.00 0.00 43.74 4.04
135 136 0.969409 AACCTAGTTCCCGACCCTCG 60.969 60.000 0.00 0.00 40.07 4.63
136 137 2.030371 CTAACCTAGTTCCCGACCCTC 58.970 57.143 0.00 0.00 0.00 4.30
137 138 1.642762 TCTAACCTAGTTCCCGACCCT 59.357 52.381 0.00 0.00 0.00 4.34
138 139 2.030371 CTCTAACCTAGTTCCCGACCC 58.970 57.143 0.00 0.00 0.00 4.46
139 140 2.030371 CCTCTAACCTAGTTCCCGACC 58.970 57.143 0.00 0.00 0.00 4.79
140 141 2.030371 CCCTCTAACCTAGTTCCCGAC 58.970 57.143 0.00 0.00 0.00 4.79
141 142 1.642762 ACCCTCTAACCTAGTTCCCGA 59.357 52.381 0.00 0.00 0.00 5.14
142 143 2.030371 GACCCTCTAACCTAGTTCCCG 58.970 57.143 0.00 0.00 0.00 5.14
143 144 2.030371 CGACCCTCTAACCTAGTTCCC 58.970 57.143 0.00 0.00 0.00 3.97
144 145 2.426381 CACGACCCTCTAACCTAGTTCC 59.574 54.545 0.00 0.00 0.00 3.62
145 146 2.426381 CCACGACCCTCTAACCTAGTTC 59.574 54.545 0.00 0.00 0.00 3.01
146 147 2.042162 TCCACGACCCTCTAACCTAGTT 59.958 50.000 0.00 0.00 0.00 2.24
147 148 1.637553 TCCACGACCCTCTAACCTAGT 59.362 52.381 0.00 0.00 0.00 2.57
148 149 2.431954 TCCACGACCCTCTAACCTAG 57.568 55.000 0.00 0.00 0.00 3.02
149 150 3.028850 CAATCCACGACCCTCTAACCTA 58.971 50.000 0.00 0.00 0.00 3.08
150 151 1.831736 CAATCCACGACCCTCTAACCT 59.168 52.381 0.00 0.00 0.00 3.50
151 152 1.742750 GCAATCCACGACCCTCTAACC 60.743 57.143 0.00 0.00 0.00 2.85
152 153 1.653151 GCAATCCACGACCCTCTAAC 58.347 55.000 0.00 0.00 0.00 2.34
153 154 0.539986 GGCAATCCACGACCCTCTAA 59.460 55.000 0.00 0.00 0.00 2.10
154 155 1.672854 CGGCAATCCACGACCCTCTA 61.673 60.000 0.00 0.00 0.00 2.43
155 156 2.990479 GGCAATCCACGACCCTCT 59.010 61.111 0.00 0.00 0.00 3.69
156 157 2.511600 CGGCAATCCACGACCCTC 60.512 66.667 0.00 0.00 0.00 4.30
157 158 3.000819 TCGGCAATCCACGACCCT 61.001 61.111 0.00 0.00 33.69 4.34
158 159 2.511600 CTCGGCAATCCACGACCC 60.512 66.667 0.00 0.00 35.04 4.46
159 160 3.195698 GCTCGGCAATCCACGACC 61.196 66.667 0.00 0.00 35.04 4.79
160 161 3.554692 CGCTCGGCAATCCACGAC 61.555 66.667 0.00 0.00 35.04 4.34
161 162 4.812476 CCGCTCGGCAATCCACGA 62.812 66.667 0.00 0.00 37.56 4.35
163 164 3.195698 GACCGCTCGGCAATCCAC 61.196 66.667 8.41 0.00 39.32 4.02
164 165 4.812476 CGACCGCTCGGCAATCCA 62.812 66.667 8.41 0.00 39.32 3.41
165 166 4.508128 TCGACCGCTCGGCAATCC 62.508 66.667 8.41 0.00 40.58 3.01
166 167 2.956964 CTCGACCGCTCGGCAATC 60.957 66.667 8.41 0.00 40.58 2.67
167 168 4.514577 CCTCGACCGCTCGGCAAT 62.515 66.667 8.41 0.00 40.58 3.56
171 172 4.493747 GAACCCTCGACCGCTCGG 62.494 72.222 6.79 6.79 40.58 4.63
180 181 1.080025 GACAACCCTCGAACCCTCG 60.080 63.158 0.00 0.00 46.87 4.63
181 182 1.080025 CGACAACCCTCGAACCCTC 60.080 63.158 0.00 0.00 35.58 4.30
182 183 1.532316 TCGACAACCCTCGAACCCT 60.532 57.895 0.00 0.00 39.71 4.34
183 184 1.080025 CTCGACAACCCTCGAACCC 60.080 63.158 0.00 0.00 42.00 4.11
184 185 1.080025 CCTCGACAACCCTCGAACC 60.080 63.158 0.00 0.00 42.00 3.62
185 186 1.080025 CCCTCGACAACCCTCGAAC 60.080 63.158 0.00 0.00 42.00 3.95
186 187 2.280552 CCCCTCGACAACCCTCGAA 61.281 63.158 0.00 0.00 42.00 3.71
187 188 2.678934 CCCCTCGACAACCCTCGA 60.679 66.667 0.00 0.00 40.37 4.04
188 189 4.452733 GCCCCTCGACAACCCTCG 62.453 72.222 0.00 0.00 34.83 4.63
189 190 4.097361 GGCCCCTCGACAACCCTC 62.097 72.222 0.00 0.00 0.00 4.30
190 191 3.248248 TAGGCCCCTCGACAACCCT 62.248 63.158 0.00 0.00 0.00 4.34
191 192 2.686106 TAGGCCCCTCGACAACCC 60.686 66.667 0.00 0.00 0.00 4.11
192 193 2.732619 CCTAGGCCCCTCGACAACC 61.733 68.421 0.00 0.00 0.00 3.77
193 194 2.732619 CCCTAGGCCCCTCGACAAC 61.733 68.421 2.05 0.00 0.00 3.32
194 195 2.365105 CCCTAGGCCCCTCGACAA 60.365 66.667 2.05 0.00 0.00 3.18
195 196 3.248248 AACCCTAGGCCCCTCGACA 62.248 63.158 2.05 0.00 0.00 4.35
196 197 2.365237 AACCCTAGGCCCCTCGAC 60.365 66.667 2.05 0.00 0.00 4.20
197 198 2.042230 GAACCCTAGGCCCCTCGA 60.042 66.667 2.05 0.00 0.00 4.04
198 199 3.537874 CGAACCCTAGGCCCCTCG 61.538 72.222 2.05 4.51 0.00 4.63
199 200 2.042230 TCGAACCCTAGGCCCCTC 60.042 66.667 2.05 0.00 0.00 4.30
200 201 2.041819 CTCGAACCCTAGGCCCCT 60.042 66.667 2.05 0.00 0.00 4.79
201 202 3.162154 CCTCGAACCCTAGGCCCC 61.162 72.222 2.05 0.00 0.00 5.80
202 203 3.162154 CCCTCGAACCCTAGGCCC 61.162 72.222 2.05 0.00 0.00 5.80
203 204 2.365237 ACCCTCGAACCCTAGGCC 60.365 66.667 2.05 0.00 0.00 5.19
204 205 2.783288 CGACCCTCGAACCCTAGGC 61.783 68.421 2.05 0.00 43.74 3.93
205 206 1.077212 TCGACCCTCGAACCCTAGG 60.077 63.158 0.06 0.06 46.90 3.02
206 207 4.651867 TCGACCCTCGAACCCTAG 57.348 61.111 0.00 0.00 46.90 3.02
214 215 4.493747 GGCGTTCCTCGACCCTCG 62.494 72.222 0.00 0.00 42.54 4.63
215 216 4.493747 CGGCGTTCCTCGACCCTC 62.494 72.222 0.00 0.00 46.11 4.30
217 218 3.984200 CTTCGGCGTTCCTCGACCC 62.984 68.421 6.85 0.00 46.11 4.46
218 219 2.506438 CTTCGGCGTTCCTCGACC 60.506 66.667 6.85 0.00 46.11 4.79
219 220 2.506438 CCTTCGGCGTTCCTCGAC 60.506 66.667 6.85 0.00 45.27 4.20
220 221 3.755628 CCCTTCGGCGTTCCTCGA 61.756 66.667 6.85 0.00 42.86 4.04
221 222 3.984200 GACCCTTCGGCGTTCCTCG 62.984 68.421 6.85 0.00 43.12 4.63
222 223 2.125633 GACCCTTCGGCGTTCCTC 60.126 66.667 6.85 0.00 0.00 3.71
223 224 4.065281 CGACCCTTCGGCGTTCCT 62.065 66.667 6.85 0.00 41.89 3.36
224 225 3.984200 CTCGACCCTTCGGCGTTCC 62.984 68.421 6.85 0.00 45.90 3.62
225 226 2.506438 CTCGACCCTTCGGCGTTC 60.506 66.667 6.85 0.00 45.90 3.95
226 227 4.065281 CCTCGACCCTTCGGCGTT 62.065 66.667 6.85 0.00 45.90 4.84
229 230 3.660732 GAACCCTCGACCCTTCGGC 62.661 68.421 0.00 0.00 45.90 5.54
230 231 2.577593 GAACCCTCGACCCTTCGG 59.422 66.667 0.00 0.00 45.90 4.30
239 240 2.749044 TCGACCCTCGAACCCTCG 60.749 66.667 0.00 0.00 46.90 4.63
253 254 3.068691 CCCCTCAGCGTTCCTCGA 61.069 66.667 0.00 0.00 42.86 4.04
259 260 3.382832 CCTCGACCCCTCAGCGTT 61.383 66.667 0.00 0.00 0.00 4.84
263 264 3.141488 CGACCCTCGACCCCTCAG 61.141 72.222 0.00 0.00 43.74 3.35
264 265 3.640257 CTCGACCCTCGACCCCTCA 62.640 68.421 0.00 0.00 44.82 3.86
265 266 2.829458 CTCGACCCTCGACCCCTC 60.829 72.222 0.00 0.00 44.82 4.30
267 268 3.951769 TTCCTCGACCCTCGACCCC 62.952 68.421 0.00 0.00 44.82 4.95
268 269 2.362120 TTCCTCGACCCTCGACCC 60.362 66.667 0.00 0.00 44.82 4.46
269 270 2.883621 GTTCCTCGACCCTCGACC 59.116 66.667 0.00 0.00 44.82 4.79
270 271 2.250841 GACGTTCCTCGACCCTCGAC 62.251 65.000 0.00 0.00 44.82 4.20
272 273 2.484203 GACGTTCCTCGACCCTCG 59.516 66.667 0.00 0.00 42.86 4.63
274 275 2.033141 TCGACGTTCCTCGACCCT 59.967 61.111 0.00 0.00 42.86 4.34
275 276 2.484203 CTCGACGTTCCTCGACCC 59.516 66.667 0.00 0.00 42.86 4.46
276 277 2.484203 CCTCGACGTTCCTCGACC 59.516 66.667 0.00 0.00 42.86 4.79
277 278 2.484203 CCCTCGACGTTCCTCGAC 59.516 66.667 0.00 0.00 42.86 4.20
278 279 2.749044 CCCCTCGACGTTCCTCGA 60.749 66.667 0.00 0.00 42.86 4.04
279 280 3.048941 GACCCCTCGACGTTCCTCG 62.049 68.421 0.00 0.00 46.00 4.63
280 281 1.530013 TTGACCCCTCGACGTTCCTC 61.530 60.000 0.00 0.00 0.00 3.71
281 282 1.532316 TTGACCCCTCGACGTTCCT 60.532 57.895 0.00 0.00 0.00 3.36
282 283 1.080025 CTTGACCCCTCGACGTTCC 60.080 63.158 0.00 0.00 0.00 3.62
283 284 1.080025 CCTTGACCCCTCGACGTTC 60.080 63.158 0.00 0.00 0.00 3.95
284 285 2.580601 CCCTTGACCCCTCGACGTT 61.581 63.158 0.00 0.00 0.00 3.99
285 286 2.995574 CCCTTGACCCCTCGACGT 60.996 66.667 0.00 0.00 0.00 4.34
286 287 4.452733 GCCCTTGACCCCTCGACG 62.453 72.222 0.00 0.00 0.00 5.12
287 288 4.097361 GGCCCTTGACCCCTCGAC 62.097 72.222 0.00 0.00 0.00 4.20
297 298 4.994756 AACCCTTGGCGGCCCTTG 62.995 66.667 17.97 6.30 0.00 3.61
298 299 4.678743 GAACCCTTGGCGGCCCTT 62.679 66.667 17.97 0.00 0.00 3.95
303 304 4.778143 CCCTCGAACCCTTGGCGG 62.778 72.222 0.00 0.00 0.00 6.13
304 305 3.952628 GACCCTCGAACCCTTGGCG 62.953 68.421 0.00 0.00 0.00 5.69
305 306 2.046217 GACCCTCGAACCCTTGGC 60.046 66.667 0.00 0.00 0.00 4.52
306 307 2.264794 CGACCCTCGAACCCTTGG 59.735 66.667 0.00 0.00 43.74 3.61
307 308 3.373226 TCGACCCTCGAACCCTTG 58.627 61.111 0.00 0.00 46.90 3.61
315 316 3.967335 GGCGATCCTCGACCCTCG 61.967 72.222 0.00 2.34 43.36 4.63
320 357 3.967335 CCCTCGGCGATCCTCGAC 61.967 72.222 11.27 0.00 46.24 4.20
352 389 4.162690 GCTCGACCCCTCGGCAAT 62.163 66.667 0.00 0.00 40.58 3.56
358 395 3.878519 CTCGACGCTCGACCCCTC 61.879 72.222 6.09 0.00 44.82 4.30
408 493 2.593956 GGCAACCTCTCGACCCCTT 61.594 63.158 0.00 0.00 0.00 3.95
470 555 1.134098 CATCATGCCCCGGTTACTTCT 60.134 52.381 0.00 0.00 0.00 2.85
551 637 4.295051 GCCTTTTGCTGAAATTCGTACAA 58.705 39.130 0.00 0.00 36.87 2.41
552 638 3.305064 GGCCTTTTGCTGAAATTCGTACA 60.305 43.478 0.00 0.00 40.92 2.90
567 653 6.813293 ATATTGCTATTTGGAAGGCCTTTT 57.187 33.333 21.54 0.00 34.31 2.27
586 672 5.108187 TCAGCAAGAGCCTTCTGAATATT 57.892 39.130 0.00 0.00 43.56 1.28
661 747 5.475719 CATGATGGTTTGAAGTTCTGCAAT 58.524 37.500 4.17 0.00 0.00 3.56
675 761 5.504010 CGAAAGTAATAAGCGCATGATGGTT 60.504 40.000 11.47 2.20 0.00 3.67
688 774 9.042008 GTCTTCATCATTAGGCGAAAGTAATAA 57.958 33.333 0.00 0.00 0.00 1.40
690 776 7.047891 TGTCTTCATCATTAGGCGAAAGTAAT 58.952 34.615 0.00 0.00 0.00 1.89
717 803 6.530019 AGTGTCAAAGGATTCAACAAAACT 57.470 33.333 0.00 0.00 0.00 2.66
749 835 1.050988 CCTCGACCCCCTCATGTCAT 61.051 60.000 0.00 0.00 0.00 3.06
806 894 4.107798 ACATCCATATTGGGGGCATTCTTA 59.892 41.667 0.00 0.00 38.32 2.10
820 909 4.581824 GGATCAACTTGTGCACATCCATAT 59.418 41.667 22.39 11.95 31.34 1.78
938 1028 1.553248 CATCTACGAGGTTTGGGGTGA 59.447 52.381 0.00 0.00 0.00 4.02
950 1040 3.926527 GGCAATATCGCAATCATCTACGA 59.073 43.478 0.00 0.00 39.11 3.43
951 1041 3.679502 TGGCAATATCGCAATCATCTACG 59.320 43.478 0.00 0.00 0.00 3.51
952 1042 5.611796 TTGGCAATATCGCAATCATCTAC 57.388 39.130 0.00 0.00 0.00 2.59
1000 1090 1.001641 GCTCTGGGTTGGTGCTCAT 60.002 57.895 0.00 0.00 0.00 2.90
1281 1375 1.224069 CCGGCCGATGAGCAATGTAG 61.224 60.000 30.73 0.00 0.00 2.74
1422 1516 9.314321 CGTATGTACTTCTCCATGAAATACTTT 57.686 33.333 0.00 0.00 37.99 2.66
1500 1594 0.252974 TAGCTGGCACCTCCCCTTTA 60.253 55.000 0.00 0.00 0.00 1.85
1594 1699 4.825085 CCAAAACAGGAACTACCAGCTTAA 59.175 41.667 0.00 0.00 42.04 1.85
1619 1728 5.010012 ACCAACATCTAGTTTGGCAAAGAAG 59.990 40.000 13.94 13.33 38.74 2.85
1664 1786 3.426159 GCAATGACCAAACCGACATGTAG 60.426 47.826 0.00 0.00 0.00 2.74
1671 1793 3.823873 ACATTTAGCAATGACCAAACCGA 59.176 39.130 3.92 0.00 42.35 4.69
1721 1859 5.441718 ACATCAACATATCAGGGTTCAGT 57.558 39.130 0.00 0.00 0.00 3.41
1748 1892 6.952605 TTTCAGGGATCTTCTCTAAGGAAA 57.047 37.500 0.00 0.00 33.22 3.13
1796 1948 9.277565 CATAATATTCCACAAAAGTCAGAAACG 57.722 33.333 0.00 0.00 0.00 3.60
1837 2038 6.428465 TGGAAAACGACACAGCATTATTCTTA 59.572 34.615 0.00 0.00 0.00 2.10
1890 2091 9.863845 CATGCATGATAGATAAATTTTGGCATA 57.136 29.630 22.59 0.00 35.56 3.14
1996 2197 9.758651 AAAAACAGACACCCATTAGAAATTTAC 57.241 29.630 0.00 0.00 0.00 2.01
2019 2220 9.833182 GTAAAGAAATCAAAAGGCAAACAAAAA 57.167 25.926 0.00 0.00 0.00 1.94
2021 2222 7.607991 TGGTAAAGAAATCAAAAGGCAAACAAA 59.392 29.630 0.00 0.00 0.00 2.83
2022 2223 7.106239 TGGTAAAGAAATCAAAAGGCAAACAA 58.894 30.769 0.00 0.00 0.00 2.83
2023 2224 6.644347 TGGTAAAGAAATCAAAAGGCAAACA 58.356 32.000 0.00 0.00 0.00 2.83
2024 2225 7.728847 ATGGTAAAGAAATCAAAAGGCAAAC 57.271 32.000 0.00 0.00 0.00 2.93
2040 2241 9.868160 AATAGATCCTTAGGGAAAATGGTAAAG 57.132 33.333 0.00 0.00 45.78 1.85
2069 2270 9.892130 ACTCAACTATGGTAATTAGAAAAGGAG 57.108 33.333 0.00 0.00 0.00 3.69
2099 2300 7.930217 TCCAACTTGAAAATTCACAACTAGAG 58.070 34.615 0.00 0.00 36.83 2.43
2101 2302 8.925161 TTTCCAACTTGAAAATTCACAACTAG 57.075 30.769 0.00 0.00 36.83 2.57
2131 2332 9.907229 CTTTAGTCCCAGATAGGTTATCTTTTT 57.093 33.333 0.00 0.00 42.70 1.94
2132 2333 7.993758 GCTTTAGTCCCAGATAGGTTATCTTTT 59.006 37.037 0.00 0.00 42.70 2.27
2133 2334 7.127339 TGCTTTAGTCCCAGATAGGTTATCTTT 59.873 37.037 0.00 0.00 42.70 2.52
2134 2335 6.615726 TGCTTTAGTCCCAGATAGGTTATCTT 59.384 38.462 0.00 0.00 42.70 2.40
2135 2336 6.143915 TGCTTTAGTCCCAGATAGGTTATCT 58.856 40.000 0.00 0.00 46.06 1.98
2136 2337 6.420913 TGCTTTAGTCCCAGATAGGTTATC 57.579 41.667 0.00 0.00 34.66 1.75
2137 2338 6.558775 TCATGCTTTAGTCCCAGATAGGTTAT 59.441 38.462 0.00 0.00 34.66 1.89
2148 2349 4.689612 TGGTAGATCATGCTTTAGTCCC 57.310 45.455 0.00 0.00 0.00 4.46
2149 2350 6.767902 TCATTTGGTAGATCATGCTTTAGTCC 59.232 38.462 0.00 0.00 0.00 3.85
2203 2404 1.608283 GCCGGTTTAGCTCAACTGACT 60.608 52.381 19.14 0.00 35.32 3.41
2208 2409 1.359459 CTCCGCCGGTTTAGCTCAAC 61.359 60.000 1.63 1.96 0.00 3.18
2210 2411 2.577059 CTCCGCCGGTTTAGCTCA 59.423 61.111 1.63 0.00 0.00 4.26
2222 2423 0.968393 TGTTTTTATGGGGCCTCCGC 60.968 55.000 0.00 0.00 38.76 5.54
2223 2424 1.476488 CTTGTTTTTATGGGGCCTCCG 59.524 52.381 0.00 0.00 38.76 4.63
2226 2427 2.022718 TGCTTGTTTTTATGGGGCCT 57.977 45.000 0.84 0.00 0.00 5.19
2227 2428 2.849294 TTGCTTGTTTTTATGGGGCC 57.151 45.000 0.00 0.00 0.00 5.80
2229 2430 4.904241 TGGATTTGCTTGTTTTTATGGGG 58.096 39.130 0.00 0.00 0.00 4.96
2230 2431 6.654161 TCATTGGATTTGCTTGTTTTTATGGG 59.346 34.615 0.00 0.00 0.00 4.00
2231 2432 7.670009 TCATTGGATTTGCTTGTTTTTATGG 57.330 32.000 0.00 0.00 0.00 2.74
2232 2433 8.231837 CCTTCATTGGATTTGCTTGTTTTTATG 58.768 33.333 0.00 0.00 0.00 1.90
2234 2435 7.504403 TCCTTCATTGGATTTGCTTGTTTTTA 58.496 30.769 0.00 0.00 0.00 1.52
2235 2436 6.355747 TCCTTCATTGGATTTGCTTGTTTTT 58.644 32.000 0.00 0.00 0.00 1.94
2236 2437 5.927819 TCCTTCATTGGATTTGCTTGTTTT 58.072 33.333 0.00 0.00 0.00 2.43
2237 2438 5.549742 TCCTTCATTGGATTTGCTTGTTT 57.450 34.783 0.00 0.00 0.00 2.83
2238 2439 5.246656 TCATCCTTCATTGGATTTGCTTGTT 59.753 36.000 0.00 0.00 43.79 2.83
2278 2487 4.788925 TTCTTTTCTTCCTCACCTTCCA 57.211 40.909 0.00 0.00 0.00 3.53
2288 2497 7.550712 AGCCAATTGTCATATTCTTTTCTTCC 58.449 34.615 4.43 0.00 0.00 3.46
2305 2514 1.734707 GCAGCTTGCAGTAGCCAATTG 60.735 52.381 6.77 0.00 44.26 2.32
2355 2567 3.651803 AGCACTGAACAGTAGACAGAC 57.348 47.619 7.15 0.00 40.20 3.51
2366 2578 4.424061 TTCACATATGCAAGCACTGAAC 57.576 40.909 1.58 0.00 0.00 3.18
2373 2585 5.464168 GGATATGGTTTCACATATGCAAGC 58.536 41.667 1.58 4.08 45.73 4.01
2423 2635 3.505680 CACATTGGCTAGTTTTGCTACCA 59.494 43.478 0.00 0.00 32.73 3.25
2426 2638 5.534654 AGTTTCACATTGGCTAGTTTTGCTA 59.465 36.000 0.00 0.00 0.00 3.49
2453 2665 4.458989 TGTGGCTTTGCGATTCTTAAATCT 59.541 37.500 0.00 0.00 39.36 2.40
2454 2666 4.732784 TGTGGCTTTGCGATTCTTAAATC 58.267 39.130 0.00 0.00 38.34 2.17
2455 2667 4.782019 TGTGGCTTTGCGATTCTTAAAT 57.218 36.364 0.00 0.00 0.00 1.40
2456 2668 4.576216 TTGTGGCTTTGCGATTCTTAAA 57.424 36.364 0.00 0.00 0.00 1.52
2457 2669 4.576216 TTTGTGGCTTTGCGATTCTTAA 57.424 36.364 0.00 0.00 0.00 1.85
2458 2670 4.576216 TTTTGTGGCTTTGCGATTCTTA 57.424 36.364 0.00 0.00 0.00 2.10
2459 2671 3.451141 TTTTGTGGCTTTGCGATTCTT 57.549 38.095 0.00 0.00 0.00 2.52
2460 2672 3.665745 ATTTTGTGGCTTTGCGATTCT 57.334 38.095 0.00 0.00 0.00 2.40
2461 2673 3.740321 TGAATTTTGTGGCTTTGCGATTC 59.260 39.130 0.00 0.00 0.00 2.52
2462 2674 3.726607 TGAATTTTGTGGCTTTGCGATT 58.273 36.364 0.00 0.00 0.00 3.34
2463 2675 3.005684 TCTGAATTTTGTGGCTTTGCGAT 59.994 39.130 0.00 0.00 0.00 4.58
2464 2676 2.360483 TCTGAATTTTGTGGCTTTGCGA 59.640 40.909 0.00 0.00 0.00 5.10
2465 2677 2.472488 GTCTGAATTTTGTGGCTTTGCG 59.528 45.455 0.00 0.00 0.00 4.85
2466 2678 2.802247 GGTCTGAATTTTGTGGCTTTGC 59.198 45.455 0.00 0.00 0.00 3.68
2467 2679 3.803778 GTGGTCTGAATTTTGTGGCTTTG 59.196 43.478 0.00 0.00 0.00 2.77
2468 2680 3.706086 AGTGGTCTGAATTTTGTGGCTTT 59.294 39.130 0.00 0.00 0.00 3.51
2469 2681 3.299503 AGTGGTCTGAATTTTGTGGCTT 58.700 40.909 0.00 0.00 0.00 4.35
2470 2682 2.949447 AGTGGTCTGAATTTTGTGGCT 58.051 42.857 0.00 0.00 0.00 4.75
2471 2683 3.733443 AAGTGGTCTGAATTTTGTGGC 57.267 42.857 0.00 0.00 0.00 5.01
2472 2684 5.009854 ACAAAGTGGTCTGAATTTTGTGG 57.990 39.130 3.19 0.00 39.65 4.17
2473 2685 5.220453 GCAACAAAGTGGTCTGAATTTTGTG 60.220 40.000 4.42 2.06 40.07 3.33
2474 2686 4.869861 GCAACAAAGTGGTCTGAATTTTGT 59.130 37.500 0.00 0.00 42.03 2.83
2475 2687 5.111293 AGCAACAAAGTGGTCTGAATTTTG 58.889 37.500 0.00 0.00 35.47 2.44
2476 2688 5.343307 AGCAACAAAGTGGTCTGAATTTT 57.657 34.783 0.00 0.00 0.00 1.82
2477 2689 5.343307 AAGCAACAAAGTGGTCTGAATTT 57.657 34.783 0.00 0.00 0.00 1.82
2478 2690 5.105392 TCAAAGCAACAAAGTGGTCTGAATT 60.105 36.000 0.00 0.00 0.00 2.17
2479 2691 4.402155 TCAAAGCAACAAAGTGGTCTGAAT 59.598 37.500 0.00 0.00 0.00 2.57
2480 2692 3.761218 TCAAAGCAACAAAGTGGTCTGAA 59.239 39.130 0.00 0.00 0.00 3.02
2481 2693 3.351740 TCAAAGCAACAAAGTGGTCTGA 58.648 40.909 0.00 0.00 0.00 3.27
2482 2694 3.781079 TCAAAGCAACAAAGTGGTCTG 57.219 42.857 0.00 0.00 0.00 3.51
2483 2695 3.763897 AGTTCAAAGCAACAAAGTGGTCT 59.236 39.130 0.00 0.00 0.00 3.85
2484 2696 3.859386 CAGTTCAAAGCAACAAAGTGGTC 59.141 43.478 0.00 0.00 0.00 4.02
2485 2697 3.509575 TCAGTTCAAAGCAACAAAGTGGT 59.490 39.130 0.00 0.00 0.00 4.16
2486 2698 3.859386 GTCAGTTCAAAGCAACAAAGTGG 59.141 43.478 0.00 0.00 0.00 4.00
2487 2699 3.859386 GGTCAGTTCAAAGCAACAAAGTG 59.141 43.478 0.00 0.00 0.00 3.16
2488 2700 3.763897 AGGTCAGTTCAAAGCAACAAAGT 59.236 39.130 0.00 0.00 0.00 2.66
2489 2701 4.376340 AGGTCAGTTCAAAGCAACAAAG 57.624 40.909 0.00 0.00 0.00 2.77
2490 2702 7.575414 TTATAGGTCAGTTCAAAGCAACAAA 57.425 32.000 0.00 0.00 0.00 2.83
2491 2703 6.293955 GCTTATAGGTCAGTTCAAAGCAACAA 60.294 38.462 0.00 0.00 38.15 2.83
2492 2704 5.181245 GCTTATAGGTCAGTTCAAAGCAACA 59.819 40.000 0.00 0.00 38.15 3.33
2493 2705 5.412904 AGCTTATAGGTCAGTTCAAAGCAAC 59.587 40.000 6.89 0.00 40.15 4.17
2494 2706 5.560724 AGCTTATAGGTCAGTTCAAAGCAA 58.439 37.500 6.89 0.00 40.15 3.91
2495 2707 5.165961 AGCTTATAGGTCAGTTCAAAGCA 57.834 39.130 6.89 0.00 40.15 3.91
2496 2708 7.634522 CAATAGCTTATAGGTCAGTTCAAAGC 58.365 38.462 0.00 0.00 38.46 3.51
2497 2709 7.280876 TGCAATAGCTTATAGGTCAGTTCAAAG 59.719 37.037 0.00 0.00 42.74 2.77
2498 2710 7.109501 TGCAATAGCTTATAGGTCAGTTCAAA 58.890 34.615 0.00 0.00 42.74 2.69
2499 2711 6.649155 TGCAATAGCTTATAGGTCAGTTCAA 58.351 36.000 0.00 0.00 42.74 2.69
2500 2712 6.233905 TGCAATAGCTTATAGGTCAGTTCA 57.766 37.500 0.00 0.00 42.74 3.18
2501 2713 6.148480 CCATGCAATAGCTTATAGGTCAGTTC 59.852 42.308 0.00 0.00 42.74 3.01
2502 2714 6.000219 CCATGCAATAGCTTATAGGTCAGTT 59.000 40.000 0.00 0.00 42.74 3.16
2503 2715 5.555017 CCATGCAATAGCTTATAGGTCAGT 58.445 41.667 0.00 0.00 42.74 3.41
2504 2716 4.394300 GCCATGCAATAGCTTATAGGTCAG 59.606 45.833 0.00 0.00 42.74 3.51
2505 2717 4.202451 TGCCATGCAATAGCTTATAGGTCA 60.202 41.667 0.00 0.00 42.74 4.02
2506 2718 4.326826 TGCCATGCAATAGCTTATAGGTC 58.673 43.478 0.00 0.00 42.74 3.85
2507 2719 4.371624 TGCCATGCAATAGCTTATAGGT 57.628 40.909 0.00 0.00 42.74 3.08
2508 2720 5.647589 CAATGCCATGCAATAGCTTATAGG 58.352 41.667 0.00 0.00 43.62 2.57
2509 2721 5.100259 GCAATGCCATGCAATAGCTTATAG 58.900 41.667 5.99 0.00 43.62 1.31
2510 2722 5.063180 GCAATGCCATGCAATAGCTTATA 57.937 39.130 5.99 0.00 43.62 0.98
2511 2723 3.921677 GCAATGCCATGCAATAGCTTAT 58.078 40.909 5.99 0.00 43.62 1.73
2512 2724 3.374220 GCAATGCCATGCAATAGCTTA 57.626 42.857 5.99 0.00 43.62 3.09
2513 2725 2.234300 GCAATGCCATGCAATAGCTT 57.766 45.000 5.99 0.00 43.62 3.74
2514 2726 3.980583 GCAATGCCATGCAATAGCT 57.019 47.368 5.99 0.00 43.62 3.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.