Multiple sequence alignment - TraesCS6A01G027900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G027900 chr6A 100.000 3455 0 0 1 3455 14300738 14304192 0.000000e+00 6381.0
1 TraesCS6A01G027900 chr6D 91.910 2188 105 28 719 2885 13059882 13062018 0.000000e+00 2994.0
2 TraesCS6A01G027900 chr6D 86.830 448 41 5 170 606 13059528 13059968 5.180000e-133 484.0
3 TraesCS6A01G027900 chr6D 100.000 29 0 0 394 422 413278799 413278827 2.000000e-03 54.7
4 TraesCS6A01G027900 chr6B 94.070 1990 70 22 786 2763 23660131 23658178 0.000000e+00 2977.0
5 TraesCS6A01G027900 chr6B 88.828 546 56 5 2886 3429 534929297 534929839 0.000000e+00 665.0
6 TraesCS6A01G027900 chr2B 88.504 548 61 2 2884 3429 484928883 484928336 0.000000e+00 662.0
7 TraesCS6A01G027900 chr5D 88.246 553 59 6 2881 3429 431251057 431250507 0.000000e+00 656.0
8 TraesCS6A01G027900 chr5D 100.000 29 0 0 394 422 430087280 430087252 2.000000e-03 54.7
9 TraesCS6A01G027900 chr3D 88.440 545 60 3 2888 3429 350874807 350874263 0.000000e+00 654.0
10 TraesCS6A01G027900 chr3D 87.934 547 62 4 2886 3429 50831865 50831320 2.910000e-180 641.0
11 TraesCS6A01G027900 chr3B 87.978 549 60 6 2883 3429 656735403 656735947 0.000000e+00 643.0
12 TraesCS6A01G027900 chr4D 88.095 546 58 5 2888 3429 343554260 343553718 2.910000e-180 641.0
13 TraesCS6A01G027900 chr2D 87.751 547 63 4 2886 3429 621975447 621974902 1.350000e-178 636.0
14 TraesCS6A01G027900 chr3A 87.386 547 64 5 2886 3429 683475146 683475690 1.050000e-174 623.0
15 TraesCS6A01G027900 chr2A 82.237 152 25 1 349 498 16794618 16794769 2.800000e-26 130.0
16 TraesCS6A01G027900 chr5A 74.121 313 60 15 176 472 29966649 29966956 3.650000e-20 110.0
17 TraesCS6A01G027900 chr5A 100.000 29 0 0 394 422 20977352 20977380 2.000000e-03 54.7
18 TraesCS6A01G027900 chr5B 78.571 112 19 4 385 495 136037528 136037635 6.190000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G027900 chr6A 14300738 14304192 3454 False 6381 6381 100.000 1 3455 1 chr6A.!!$F1 3454
1 TraesCS6A01G027900 chr6D 13059528 13062018 2490 False 1739 2994 89.370 170 2885 2 chr6D.!!$F2 2715
2 TraesCS6A01G027900 chr6B 23658178 23660131 1953 True 2977 2977 94.070 786 2763 1 chr6B.!!$R1 1977
3 TraesCS6A01G027900 chr6B 534929297 534929839 542 False 665 665 88.828 2886 3429 1 chr6B.!!$F1 543
4 TraesCS6A01G027900 chr2B 484928336 484928883 547 True 662 662 88.504 2884 3429 1 chr2B.!!$R1 545
5 TraesCS6A01G027900 chr5D 431250507 431251057 550 True 656 656 88.246 2881 3429 1 chr5D.!!$R2 548
6 TraesCS6A01G027900 chr3D 350874263 350874807 544 True 654 654 88.440 2888 3429 1 chr3D.!!$R2 541
7 TraesCS6A01G027900 chr3D 50831320 50831865 545 True 641 641 87.934 2886 3429 1 chr3D.!!$R1 543
8 TraesCS6A01G027900 chr3B 656735403 656735947 544 False 643 643 87.978 2883 3429 1 chr3B.!!$F1 546
9 TraesCS6A01G027900 chr4D 343553718 343554260 542 True 641 641 88.095 2888 3429 1 chr4D.!!$R1 541
10 TraesCS6A01G027900 chr2D 621974902 621975447 545 True 636 636 87.751 2886 3429 1 chr2D.!!$R1 543
11 TraesCS6A01G027900 chr3A 683475146 683475690 544 False 623 623 87.386 2886 3429 1 chr3A.!!$F1 543

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
722 733 0.035317 AGAAGATGCCACGCTGTCAA 59.965 50.0 0.0 0.0 0.0 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2693 2728 0.237498 CACAGTACGTGTCGAGCAGA 59.763 55.0 0.0 0.0 41.03 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.636282 ACAAATACAACGCAAAGGGAC 57.364 42.857 0.00 0.00 0.00 4.46
22 23 2.295070 ACAAATACAACGCAAAGGGACC 59.705 45.455 0.00 0.00 0.00 4.46
23 24 2.556622 CAAATACAACGCAAAGGGACCT 59.443 45.455 0.00 0.00 0.00 3.85
24 25 1.821216 ATACAACGCAAAGGGACCTG 58.179 50.000 0.00 0.00 0.00 4.00
25 26 0.887387 TACAACGCAAAGGGACCTGC 60.887 55.000 0.00 0.00 34.75 4.85
26 27 2.597510 AACGCAAAGGGACCTGCC 60.598 61.111 0.00 0.00 34.62 4.85
37 38 1.763968 GGACCTGCCCTAAACCAATC 58.236 55.000 0.00 0.00 0.00 2.67
38 39 1.685180 GGACCTGCCCTAAACCAATCC 60.685 57.143 0.00 0.00 0.00 3.01
39 40 0.335019 ACCTGCCCTAAACCAATCCC 59.665 55.000 0.00 0.00 0.00 3.85
40 41 0.397114 CCTGCCCTAAACCAATCCCC 60.397 60.000 0.00 0.00 0.00 4.81
41 42 0.334676 CTGCCCTAAACCAATCCCCA 59.665 55.000 0.00 0.00 0.00 4.96
42 43 0.787084 TGCCCTAAACCAATCCCCAA 59.213 50.000 0.00 0.00 0.00 4.12
43 44 1.272985 TGCCCTAAACCAATCCCCAAG 60.273 52.381 0.00 0.00 0.00 3.61
44 45 1.485124 CCCTAAACCAATCCCCAAGC 58.515 55.000 0.00 0.00 0.00 4.01
45 46 1.485124 CCTAAACCAATCCCCAAGCC 58.515 55.000 0.00 0.00 0.00 4.35
46 47 1.102978 CTAAACCAATCCCCAAGCCG 58.897 55.000 0.00 0.00 0.00 5.52
47 48 0.968393 TAAACCAATCCCCAAGCCGC 60.968 55.000 0.00 0.00 0.00 6.53
48 49 4.759205 ACCAATCCCCAAGCCGCC 62.759 66.667 0.00 0.00 0.00 6.13
49 50 4.447342 CCAATCCCCAAGCCGCCT 62.447 66.667 0.00 0.00 0.00 5.52
50 51 2.830370 CAATCCCCAAGCCGCCTC 60.830 66.667 0.00 0.00 0.00 4.70
51 52 3.017581 AATCCCCAAGCCGCCTCT 61.018 61.111 0.00 0.00 0.00 3.69
52 53 2.616458 AATCCCCAAGCCGCCTCTT 61.616 57.895 0.00 0.00 0.00 2.85
53 54 2.843912 AATCCCCAAGCCGCCTCTTG 62.844 60.000 5.80 5.80 42.23 3.02
54 55 4.033776 CCCCAAGCCGCCTCTTGA 62.034 66.667 12.61 0.00 44.61 3.02
55 56 2.747855 CCCAAGCCGCCTCTTGAC 60.748 66.667 12.61 0.00 44.61 3.18
56 57 2.032528 CCAAGCCGCCTCTTGACA 59.967 61.111 12.61 0.00 44.61 3.58
57 58 1.600636 CCAAGCCGCCTCTTGACAA 60.601 57.895 12.61 0.00 44.61 3.18
58 59 1.580845 CCAAGCCGCCTCTTGACAAG 61.581 60.000 9.03 9.03 44.61 3.16
59 60 1.968540 AAGCCGCCTCTTGACAAGC 60.969 57.895 10.50 0.00 0.00 4.01
60 61 2.669569 GCCGCCTCTTGACAAGCA 60.670 61.111 10.50 0.00 0.00 3.91
61 62 2.970974 GCCGCCTCTTGACAAGCAC 61.971 63.158 10.50 1.57 0.00 4.40
62 63 2.328099 CCGCCTCTTGACAAGCACC 61.328 63.158 10.50 0.24 0.00 5.01
63 64 2.671177 CGCCTCTTGACAAGCACCG 61.671 63.158 10.50 8.27 0.00 4.94
64 65 2.328099 GCCTCTTGACAAGCACCGG 61.328 63.158 10.50 0.00 0.00 5.28
65 66 1.071471 CCTCTTGACAAGCACCGGT 59.929 57.895 10.50 0.00 0.00 5.28
66 67 0.951040 CCTCTTGACAAGCACCGGTC 60.951 60.000 2.59 0.00 34.63 4.79
67 68 0.249868 CTCTTGACAAGCACCGGTCA 60.250 55.000 2.59 0.00 41.93 4.02
68 69 0.531974 TCTTGACAAGCACCGGTCAC 60.532 55.000 2.59 0.00 43.22 3.67
69 70 1.507141 CTTGACAAGCACCGGTCACC 61.507 60.000 2.59 0.00 43.22 4.02
70 71 1.978455 TTGACAAGCACCGGTCACCT 61.978 55.000 2.59 0.00 43.22 4.00
71 72 1.227853 GACAAGCACCGGTCACCTT 60.228 57.895 2.59 4.83 34.22 3.50
72 73 1.507141 GACAAGCACCGGTCACCTTG 61.507 60.000 25.91 25.91 40.26 3.61
73 74 1.227823 CAAGCACCGGTCACCTTGA 60.228 57.895 24.48 0.00 37.46 3.02
74 75 0.817634 CAAGCACCGGTCACCTTGAA 60.818 55.000 24.48 0.00 37.46 2.69
75 76 0.535102 AAGCACCGGTCACCTTGAAG 60.535 55.000 2.59 0.00 0.00 3.02
76 77 1.070786 GCACCGGTCACCTTGAAGA 59.929 57.895 2.59 0.00 0.00 2.87
77 78 0.321653 GCACCGGTCACCTTGAAGAT 60.322 55.000 2.59 0.00 0.00 2.40
78 79 1.066430 GCACCGGTCACCTTGAAGATA 60.066 52.381 2.59 0.00 0.00 1.98
79 80 2.614481 GCACCGGTCACCTTGAAGATAA 60.614 50.000 2.59 0.00 0.00 1.75
80 81 3.670625 CACCGGTCACCTTGAAGATAAA 58.329 45.455 2.59 0.00 0.00 1.40
81 82 4.261801 CACCGGTCACCTTGAAGATAAAT 58.738 43.478 2.59 0.00 0.00 1.40
82 83 4.094887 CACCGGTCACCTTGAAGATAAATG 59.905 45.833 2.59 0.00 0.00 2.32
83 84 4.261801 CCGGTCACCTTGAAGATAAATGT 58.738 43.478 0.00 0.00 0.00 2.71
84 85 4.332819 CCGGTCACCTTGAAGATAAATGTC 59.667 45.833 0.00 0.00 0.00 3.06
85 86 5.178797 CGGTCACCTTGAAGATAAATGTCT 58.821 41.667 0.00 0.00 0.00 3.41
86 87 5.643777 CGGTCACCTTGAAGATAAATGTCTT 59.356 40.000 0.00 0.00 40.99 3.01
87 88 6.149474 CGGTCACCTTGAAGATAAATGTCTTT 59.851 38.462 0.00 0.00 38.51 2.52
88 89 7.333423 CGGTCACCTTGAAGATAAATGTCTTTA 59.667 37.037 0.00 0.00 38.51 1.85
89 90 9.010029 GGTCACCTTGAAGATAAATGTCTTTAA 57.990 33.333 0.00 0.00 38.51 1.52
90 91 9.827411 GTCACCTTGAAGATAAATGTCTTTAAC 57.173 33.333 0.00 0.00 38.51 2.01
91 92 9.793259 TCACCTTGAAGATAAATGTCTTTAACT 57.207 29.630 0.00 0.00 38.51 2.24
92 93 9.831737 CACCTTGAAGATAAATGTCTTTAACTG 57.168 33.333 0.00 0.00 38.51 3.16
93 94 9.793259 ACCTTGAAGATAAATGTCTTTAACTGA 57.207 29.630 0.00 0.00 38.51 3.41
104 105 6.131544 TGTCTTTAACTGAACTTTCCTTGC 57.868 37.500 0.00 0.00 0.00 4.01
105 106 5.067283 TGTCTTTAACTGAACTTTCCTTGCC 59.933 40.000 0.00 0.00 0.00 4.52
106 107 5.067283 GTCTTTAACTGAACTTTCCTTGCCA 59.933 40.000 0.00 0.00 0.00 4.92
107 108 5.654650 TCTTTAACTGAACTTTCCTTGCCAA 59.345 36.000 0.00 0.00 0.00 4.52
108 109 5.923733 TTAACTGAACTTTCCTTGCCAAA 57.076 34.783 0.00 0.00 0.00 3.28
109 110 3.801114 ACTGAACTTTCCTTGCCAAAC 57.199 42.857 0.00 0.00 0.00 2.93
110 111 2.430694 ACTGAACTTTCCTTGCCAAACC 59.569 45.455 0.00 0.00 0.00 3.27
111 112 2.430332 CTGAACTTTCCTTGCCAAACCA 59.570 45.455 0.00 0.00 0.00 3.67
112 113 2.167487 TGAACTTTCCTTGCCAAACCAC 59.833 45.455 0.00 0.00 0.00 4.16
113 114 1.119684 ACTTTCCTTGCCAAACCACC 58.880 50.000 0.00 0.00 0.00 4.61
114 115 1.118838 CTTTCCTTGCCAAACCACCA 58.881 50.000 0.00 0.00 0.00 4.17
115 116 1.693606 CTTTCCTTGCCAAACCACCAT 59.306 47.619 0.00 0.00 0.00 3.55
116 117 1.799933 TTCCTTGCCAAACCACCATT 58.200 45.000 0.00 0.00 0.00 3.16
117 118 1.047002 TCCTTGCCAAACCACCATTG 58.953 50.000 0.00 0.00 0.00 2.82
118 119 1.047002 CCTTGCCAAACCACCATTGA 58.953 50.000 0.00 0.00 0.00 2.57
119 120 1.415659 CCTTGCCAAACCACCATTGAA 59.584 47.619 0.00 0.00 0.00 2.69
120 121 2.038820 CCTTGCCAAACCACCATTGAAT 59.961 45.455 0.00 0.00 0.00 2.57
121 122 2.835580 TGCCAAACCACCATTGAATG 57.164 45.000 0.00 0.00 0.00 2.67
122 123 1.270732 TGCCAAACCACCATTGAATGC 60.271 47.619 0.00 0.00 0.00 3.56
123 124 1.945355 GCCAAACCACCATTGAATGCC 60.945 52.381 0.00 0.00 0.00 4.40
124 125 1.338960 CCAAACCACCATTGAATGCCC 60.339 52.381 0.00 0.00 0.00 5.36
125 126 1.347050 CAAACCACCATTGAATGCCCA 59.653 47.619 0.00 0.00 0.00 5.36
126 127 1.727062 AACCACCATTGAATGCCCAA 58.273 45.000 0.00 0.00 0.00 4.12
127 128 1.269012 ACCACCATTGAATGCCCAAG 58.731 50.000 0.00 0.00 0.00 3.61
128 129 1.203162 ACCACCATTGAATGCCCAAGA 60.203 47.619 0.00 0.00 0.00 3.02
129 130 1.479323 CCACCATTGAATGCCCAAGAG 59.521 52.381 0.00 0.00 0.00 2.85
130 131 2.449464 CACCATTGAATGCCCAAGAGA 58.551 47.619 0.00 0.00 0.00 3.10
131 132 2.827322 CACCATTGAATGCCCAAGAGAA 59.173 45.455 0.00 0.00 0.00 2.87
132 133 3.094572 ACCATTGAATGCCCAAGAGAAG 58.905 45.455 0.00 0.00 0.00 2.85
133 134 3.245371 ACCATTGAATGCCCAAGAGAAGA 60.245 43.478 0.00 0.00 0.00 2.87
134 135 3.765511 CCATTGAATGCCCAAGAGAAGAA 59.234 43.478 0.00 0.00 0.00 2.52
135 136 4.142227 CCATTGAATGCCCAAGAGAAGAAG 60.142 45.833 0.00 0.00 0.00 2.85
136 137 3.077484 TGAATGCCCAAGAGAAGAAGG 57.923 47.619 0.00 0.00 0.00 3.46
137 138 2.644299 TGAATGCCCAAGAGAAGAAGGA 59.356 45.455 0.00 0.00 0.00 3.36
138 139 3.074390 TGAATGCCCAAGAGAAGAAGGAA 59.926 43.478 0.00 0.00 0.00 3.36
139 140 2.867109 TGCCCAAGAGAAGAAGGAAG 57.133 50.000 0.00 0.00 0.00 3.46
140 141 1.352352 TGCCCAAGAGAAGAAGGAAGG 59.648 52.381 0.00 0.00 0.00 3.46
141 142 1.352687 GCCCAAGAGAAGAAGGAAGGT 59.647 52.381 0.00 0.00 0.00 3.50
142 143 2.572104 GCCCAAGAGAAGAAGGAAGGTA 59.428 50.000 0.00 0.00 0.00 3.08
143 144 3.369997 GCCCAAGAGAAGAAGGAAGGTAG 60.370 52.174 0.00 0.00 0.00 3.18
144 145 4.097418 CCCAAGAGAAGAAGGAAGGTAGA 58.903 47.826 0.00 0.00 0.00 2.59
145 146 4.719273 CCCAAGAGAAGAAGGAAGGTAGAT 59.281 45.833 0.00 0.00 0.00 1.98
146 147 5.396213 CCCAAGAGAAGAAGGAAGGTAGATG 60.396 48.000 0.00 0.00 0.00 2.90
147 148 5.396213 CCAAGAGAAGAAGGAAGGTAGATGG 60.396 48.000 0.00 0.00 0.00 3.51
148 149 3.709141 AGAGAAGAAGGAAGGTAGATGGC 59.291 47.826 0.00 0.00 0.00 4.40
149 150 2.432510 AGAAGAAGGAAGGTAGATGGCG 59.567 50.000 0.00 0.00 0.00 5.69
150 151 1.123928 AGAAGGAAGGTAGATGGCGG 58.876 55.000 0.00 0.00 0.00 6.13
151 152 0.106894 GAAGGAAGGTAGATGGCGGG 59.893 60.000 0.00 0.00 0.00 6.13
152 153 0.326238 AAGGAAGGTAGATGGCGGGA 60.326 55.000 0.00 0.00 0.00 5.14
153 154 1.049289 AGGAAGGTAGATGGCGGGAC 61.049 60.000 0.00 0.00 0.00 4.46
154 155 1.049289 GGAAGGTAGATGGCGGGACT 61.049 60.000 0.00 0.00 0.00 3.85
155 156 0.389757 GAAGGTAGATGGCGGGACTC 59.610 60.000 0.00 0.00 0.00 3.36
156 157 1.392710 AAGGTAGATGGCGGGACTCG 61.393 60.000 0.00 0.00 42.76 4.18
157 158 1.826921 GGTAGATGGCGGGACTCGA 60.827 63.158 0.00 0.00 42.43 4.04
158 159 1.179814 GGTAGATGGCGGGACTCGAT 61.180 60.000 0.00 0.00 42.43 3.59
159 160 0.674534 GTAGATGGCGGGACTCGATT 59.325 55.000 0.00 0.00 42.43 3.34
160 161 1.068741 GTAGATGGCGGGACTCGATTT 59.931 52.381 0.00 0.00 42.43 2.17
161 162 0.179073 AGATGGCGGGACTCGATTTG 60.179 55.000 0.00 0.00 42.43 2.32
162 163 0.462047 GATGGCGGGACTCGATTTGT 60.462 55.000 0.00 0.00 42.43 2.83
163 164 0.462047 ATGGCGGGACTCGATTTGTC 60.462 55.000 0.00 0.00 42.43 3.18
173 174 2.088950 TCGATTTGTCCCGAGAAACC 57.911 50.000 0.00 0.00 0.00 3.27
192 193 0.526211 CATCGTCTTGGACTCACCGA 59.474 55.000 0.00 0.00 42.61 4.69
195 196 1.137513 CGTCTTGGACTCACCGAAAC 58.862 55.000 0.00 0.00 42.61 2.78
228 229 1.471501 CGCCCATGAAGATCAACTCGA 60.472 52.381 0.00 0.00 0.00 4.04
234 235 1.205655 TGAAGATCAACTCGAGCCAGG 59.794 52.381 13.61 0.00 0.00 4.45
281 282 1.404843 ATACTCCAAGCCGACTCTCC 58.595 55.000 0.00 0.00 0.00 3.71
286 287 1.367471 CAAGCCGACTCTCCACACA 59.633 57.895 0.00 0.00 0.00 3.72
287 288 0.946221 CAAGCCGACTCTCCACACAC 60.946 60.000 0.00 0.00 0.00 3.82
288 289 2.048127 GCCGACTCTCCACACACC 60.048 66.667 0.00 0.00 0.00 4.16
292 293 0.318441 CGACTCTCCACACACCATGT 59.682 55.000 0.00 0.00 44.81 3.21
304 305 1.774254 ACACCATGTTCCCAACAGAGA 59.226 47.619 0.00 0.00 45.95 3.10
312 313 2.234300 TCCCAACAGAGAAACGACAC 57.766 50.000 0.00 0.00 0.00 3.67
319 320 3.195661 ACAGAGAAACGACACCAAAGAC 58.804 45.455 0.00 0.00 0.00 3.01
320 321 3.194861 CAGAGAAACGACACCAAAGACA 58.805 45.455 0.00 0.00 0.00 3.41
321 322 3.809832 CAGAGAAACGACACCAAAGACAT 59.190 43.478 0.00 0.00 0.00 3.06
328 329 1.131126 GACACCAAAGACATCGCCATG 59.869 52.381 0.00 0.00 35.92 3.66
329 330 1.271325 ACACCAAAGACATCGCCATGA 60.271 47.619 0.00 0.00 33.72 3.07
336 337 1.487976 AGACATCGCCATGACCAATCT 59.512 47.619 0.00 0.00 33.72 2.40
357 367 2.680352 ACAGACCGCCGGAGACAT 60.680 61.111 11.71 0.00 0.00 3.06
358 368 2.283529 ACAGACCGCCGGAGACATT 61.284 57.895 11.71 0.00 0.00 2.71
363 373 2.727392 CCGCCGGAGACATTACCCA 61.727 63.158 5.05 0.00 0.00 4.51
365 375 0.391927 CGCCGGAGACATTACCCAAA 60.392 55.000 5.05 0.00 0.00 3.28
382 393 2.499303 AAACAAGGGGGAGATGCCGG 62.499 60.000 0.00 0.00 37.63 6.13
406 417 2.989253 TCAGCGACGCCTCCAAGA 60.989 61.111 17.79 2.45 0.00 3.02
444 455 2.592574 CGCCATCGCCACCATCAT 60.593 61.111 0.00 0.00 0.00 2.45
448 459 1.224069 CCATCGCCACCATCATCGAC 61.224 60.000 0.00 0.00 33.59 4.20
452 463 1.431488 CGCCACCATCATCGACCAAG 61.431 60.000 0.00 0.00 0.00 3.61
457 468 0.175760 CCATCATCGACCAAGGACGT 59.824 55.000 10.46 0.00 35.12 4.34
478 489 2.675844 TGCCGGATTTTCATCAGTAACG 59.324 45.455 5.05 0.00 0.00 3.18
479 490 2.676342 GCCGGATTTTCATCAGTAACGT 59.324 45.455 5.05 0.00 0.00 3.99
480 491 3.242316 GCCGGATTTTCATCAGTAACGTC 60.242 47.826 5.05 0.00 0.00 4.34
481 492 4.181578 CCGGATTTTCATCAGTAACGTCT 58.818 43.478 0.00 0.00 0.00 4.18
482 493 4.267928 CCGGATTTTCATCAGTAACGTCTC 59.732 45.833 0.00 0.00 0.00 3.36
483 494 4.862574 CGGATTTTCATCAGTAACGTCTCA 59.137 41.667 0.00 0.00 0.00 3.27
484 495 5.520288 CGGATTTTCATCAGTAACGTCTCAT 59.480 40.000 0.00 0.00 0.00 2.90
507 518 2.378634 CCCACCCCTCCCATCTGAC 61.379 68.421 0.00 0.00 0.00 3.51
584 595 2.446036 GGGGGCCTACGTGATCCT 60.446 66.667 0.84 0.00 0.00 3.24
585 596 2.508751 GGGGGCCTACGTGATCCTC 61.509 68.421 0.84 0.00 0.00 3.71
586 597 1.457831 GGGGCCTACGTGATCCTCT 60.458 63.158 0.84 0.00 0.00 3.69
587 598 1.465200 GGGGCCTACGTGATCCTCTC 61.465 65.000 0.84 0.00 0.00 3.20
588 599 1.465200 GGGCCTACGTGATCCTCTCC 61.465 65.000 0.84 0.00 0.00 3.71
589 600 1.465200 GGCCTACGTGATCCTCTCCC 61.465 65.000 0.00 0.00 0.00 4.30
590 601 0.468400 GCCTACGTGATCCTCTCCCT 60.468 60.000 0.00 0.00 0.00 4.20
591 602 1.611519 CCTACGTGATCCTCTCCCTC 58.388 60.000 0.00 0.00 0.00 4.30
592 603 1.144093 CCTACGTGATCCTCTCCCTCT 59.856 57.143 0.00 0.00 0.00 3.69
593 604 2.372504 CCTACGTGATCCTCTCCCTCTA 59.627 54.545 0.00 0.00 0.00 2.43
594 605 3.009695 CCTACGTGATCCTCTCCCTCTAT 59.990 52.174 0.00 0.00 0.00 1.98
595 606 3.603965 ACGTGATCCTCTCCCTCTATT 57.396 47.619 0.00 0.00 0.00 1.73
596 607 3.226777 ACGTGATCCTCTCCCTCTATTG 58.773 50.000 0.00 0.00 0.00 1.90
597 608 3.117474 ACGTGATCCTCTCCCTCTATTGA 60.117 47.826 0.00 0.00 0.00 2.57
598 609 3.254657 CGTGATCCTCTCCCTCTATTGAC 59.745 52.174 0.00 0.00 0.00 3.18
599 610 4.219115 GTGATCCTCTCCCTCTATTGACA 58.781 47.826 0.00 0.00 0.00 3.58
600 611 4.837860 GTGATCCTCTCCCTCTATTGACAT 59.162 45.833 0.00 0.00 0.00 3.06
601 612 5.047377 GTGATCCTCTCCCTCTATTGACATC 60.047 48.000 0.00 0.00 0.00 3.06
602 613 4.823364 TCCTCTCCCTCTATTGACATCT 57.177 45.455 0.00 0.00 0.00 2.90
603 614 4.735369 TCCTCTCCCTCTATTGACATCTC 58.265 47.826 0.00 0.00 0.00 2.75
604 615 3.831911 CCTCTCCCTCTATTGACATCTCC 59.168 52.174 0.00 0.00 0.00 3.71
605 616 4.478203 CTCTCCCTCTATTGACATCTCCA 58.522 47.826 0.00 0.00 0.00 3.86
606 617 4.219115 TCTCCCTCTATTGACATCTCCAC 58.781 47.826 0.00 0.00 0.00 4.02
607 618 3.963374 CTCCCTCTATTGACATCTCCACA 59.037 47.826 0.00 0.00 0.00 4.17
608 619 3.706594 TCCCTCTATTGACATCTCCACAC 59.293 47.826 0.00 0.00 0.00 3.82
609 620 3.491619 CCCTCTATTGACATCTCCACACG 60.492 52.174 0.00 0.00 0.00 4.49
610 621 3.119291 CTCTATTGACATCTCCACACGC 58.881 50.000 0.00 0.00 0.00 5.34
611 622 1.854743 CTATTGACATCTCCACACGCG 59.145 52.381 3.53 3.53 0.00 6.01
612 623 0.246360 ATTGACATCTCCACACGCGA 59.754 50.000 15.93 0.00 0.00 5.87
613 624 0.246360 TTGACATCTCCACACGCGAT 59.754 50.000 15.93 0.00 0.00 4.58
614 625 0.458370 TGACATCTCCACACGCGATG 60.458 55.000 15.93 10.97 40.18 3.84
615 626 1.756375 GACATCTCCACACGCGATGC 61.756 60.000 15.93 0.00 38.42 3.91
616 627 1.520120 CATCTCCACACGCGATGCT 60.520 57.895 15.93 0.00 0.00 3.79
617 628 1.086067 CATCTCCACACGCGATGCTT 61.086 55.000 15.93 0.00 0.00 3.91
618 629 0.807667 ATCTCCACACGCGATGCTTC 60.808 55.000 15.93 0.00 0.00 3.86
619 630 2.434185 TCCACACGCGATGCTTCC 60.434 61.111 15.93 0.00 0.00 3.46
620 631 2.741985 CCACACGCGATGCTTCCA 60.742 61.111 15.93 0.00 0.00 3.53
621 632 2.324330 CCACACGCGATGCTTCCAA 61.324 57.895 15.93 0.00 0.00 3.53
622 633 1.647545 CCACACGCGATGCTTCCAAT 61.648 55.000 15.93 0.00 0.00 3.16
623 634 1.006086 CACACGCGATGCTTCCAATA 58.994 50.000 15.93 0.00 0.00 1.90
624 635 1.004610 CACACGCGATGCTTCCAATAG 60.005 52.381 15.93 0.00 0.00 1.73
625 636 1.134818 ACACGCGATGCTTCCAATAGA 60.135 47.619 15.93 0.00 0.00 1.98
626 637 1.524355 CACGCGATGCTTCCAATAGAG 59.476 52.381 15.93 0.00 0.00 2.43
627 638 1.409064 ACGCGATGCTTCCAATAGAGA 59.591 47.619 15.93 0.00 0.00 3.10
628 639 2.159099 ACGCGATGCTTCCAATAGAGAA 60.159 45.455 15.93 0.00 0.00 2.87
629 640 3.062763 CGCGATGCTTCCAATAGAGAAT 58.937 45.455 0.00 0.00 0.00 2.40
630 641 3.122613 CGCGATGCTTCCAATAGAGAATC 59.877 47.826 0.00 0.00 0.00 2.52
631 642 4.060900 GCGATGCTTCCAATAGAGAATCA 58.939 43.478 0.00 0.00 37.82 2.57
632 643 4.512944 GCGATGCTTCCAATAGAGAATCAA 59.487 41.667 0.00 0.00 37.82 2.57
633 644 5.559799 GCGATGCTTCCAATAGAGAATCAAC 60.560 44.000 0.00 0.00 37.82 3.18
634 645 5.525012 CGATGCTTCCAATAGAGAATCAACA 59.475 40.000 0.00 0.00 37.82 3.33
635 646 6.510799 CGATGCTTCCAATAGAGAATCAACAC 60.511 42.308 0.00 0.00 37.82 3.32
636 647 4.943705 TGCTTCCAATAGAGAATCAACACC 59.056 41.667 0.00 0.00 37.82 4.16
637 648 4.943705 GCTTCCAATAGAGAATCAACACCA 59.056 41.667 0.00 0.00 37.82 4.17
638 649 5.415701 GCTTCCAATAGAGAATCAACACCAA 59.584 40.000 0.00 0.00 37.82 3.67
639 650 6.071952 GCTTCCAATAGAGAATCAACACCAAA 60.072 38.462 0.00 0.00 37.82 3.28
640 651 7.452880 TTCCAATAGAGAATCAACACCAAAG 57.547 36.000 0.00 0.00 37.82 2.77
641 652 6.778821 TCCAATAGAGAATCAACACCAAAGA 58.221 36.000 0.00 0.00 37.82 2.52
642 653 6.655003 TCCAATAGAGAATCAACACCAAAGAC 59.345 38.462 0.00 0.00 37.82 3.01
643 654 6.430925 CCAATAGAGAATCAACACCAAAGACA 59.569 38.462 0.00 0.00 37.82 3.41
644 655 7.301054 CAATAGAGAATCAACACCAAAGACAC 58.699 38.462 0.00 0.00 37.82 3.67
645 656 4.137543 AGAGAATCAACACCAAAGACACC 58.862 43.478 0.00 0.00 37.82 4.16
646 657 2.878406 AGAATCAACACCAAAGACACCG 59.122 45.455 0.00 0.00 0.00 4.94
647 658 0.951558 ATCAACACCAAAGACACCGC 59.048 50.000 0.00 0.00 0.00 5.68
648 659 1.098712 TCAACACCAAAGACACCGCC 61.099 55.000 0.00 0.00 0.00 6.13
649 660 1.077357 AACACCAAAGACACCGCCA 60.077 52.632 0.00 0.00 0.00 5.69
650 661 0.467290 AACACCAAAGACACCGCCAT 60.467 50.000 0.00 0.00 0.00 4.40
651 662 1.172180 ACACCAAAGACACCGCCATG 61.172 55.000 0.00 0.00 0.00 3.66
652 663 0.888736 CACCAAAGACACCGCCATGA 60.889 55.000 0.00 0.00 0.00 3.07
653 664 0.889186 ACCAAAGACACCGCCATGAC 60.889 55.000 0.00 0.00 0.00 3.06
654 665 1.586154 CCAAAGACACCGCCATGACC 61.586 60.000 0.00 0.00 0.00 4.02
655 666 0.888736 CAAAGACACCGCCATGACCA 60.889 55.000 0.00 0.00 0.00 4.02
656 667 0.179004 AAAGACACCGCCATGACCAA 60.179 50.000 0.00 0.00 0.00 3.67
657 668 0.038166 AAGACACCGCCATGACCAAT 59.962 50.000 0.00 0.00 0.00 3.16
658 669 0.392998 AGACACCGCCATGACCAATC 60.393 55.000 0.00 0.00 0.00 2.67
659 670 0.392998 GACACCGCCATGACCAATCT 60.393 55.000 0.00 0.00 0.00 2.40
660 671 0.677731 ACACCGCCATGACCAATCTG 60.678 55.000 0.00 0.00 0.00 2.90
661 672 1.077501 ACCGCCATGACCAATCTGG 60.078 57.895 0.00 0.00 45.02 3.86
667 678 3.497103 CCATGACCAATCTGGCATAGA 57.503 47.619 0.00 0.00 42.67 1.98
668 679 3.144506 CCATGACCAATCTGGCATAGAC 58.855 50.000 0.00 0.00 42.67 2.59
669 680 3.144506 CATGACCAATCTGGCATAGACC 58.855 50.000 0.00 0.00 42.67 3.85
670 681 1.138859 TGACCAATCTGGCATAGACCG 59.861 52.381 0.00 0.00 42.67 4.79
671 682 1.412710 GACCAATCTGGCATAGACCGA 59.587 52.381 0.00 0.00 42.67 4.69
672 683 1.414181 ACCAATCTGGCATAGACCGAG 59.586 52.381 0.00 0.00 42.67 4.63
673 684 1.270518 CCAATCTGGCATAGACCGAGG 60.271 57.143 0.00 0.00 38.49 4.63
674 685 0.394565 AATCTGGCATAGACCGAGGC 59.605 55.000 0.00 0.00 38.49 4.70
675 686 0.470833 ATCTGGCATAGACCGAGGCT 60.471 55.000 0.00 0.00 38.49 4.58
676 687 0.687757 TCTGGCATAGACCGAGGCTT 60.688 55.000 0.00 0.00 0.00 4.35
677 688 0.179000 CTGGCATAGACCGAGGCTTT 59.821 55.000 0.00 0.00 0.00 3.51
678 689 0.107703 TGGCATAGACCGAGGCTTTG 60.108 55.000 0.00 0.00 0.00 2.77
679 690 1.440145 GGCATAGACCGAGGCTTTGC 61.440 60.000 11.77 11.77 38.88 3.68
689 700 3.056328 GGCTTTGCCCGGAGACAC 61.056 66.667 0.73 0.00 44.06 3.67
690 701 2.032681 GCTTTGCCCGGAGACACT 59.967 61.111 0.73 0.00 0.00 3.55
691 702 1.295423 GCTTTGCCCGGAGACACTA 59.705 57.895 0.73 0.00 0.00 2.74
692 703 1.019805 GCTTTGCCCGGAGACACTAC 61.020 60.000 0.73 0.00 0.00 2.73
693 704 0.391263 CTTTGCCCGGAGACACTACC 60.391 60.000 0.73 0.00 0.00 3.18
694 705 1.833787 TTTGCCCGGAGACACTACCC 61.834 60.000 0.73 0.00 0.00 3.69
695 706 2.682494 GCCCGGAGACACTACCCA 60.682 66.667 0.73 0.00 0.00 4.51
696 707 2.288025 GCCCGGAGACACTACCCAA 61.288 63.158 0.73 0.00 0.00 4.12
697 708 1.833787 GCCCGGAGACACTACCCAAA 61.834 60.000 0.73 0.00 0.00 3.28
698 709 0.036671 CCCGGAGACACTACCCAAAC 60.037 60.000 0.73 0.00 0.00 2.93
699 710 0.682852 CCGGAGACACTACCCAAACA 59.317 55.000 0.00 0.00 0.00 2.83
700 711 1.071071 CCGGAGACACTACCCAAACAA 59.929 52.381 0.00 0.00 0.00 2.83
701 712 2.413837 CGGAGACACTACCCAAACAAG 58.586 52.381 0.00 0.00 0.00 3.16
702 713 2.779506 GGAGACACTACCCAAACAAGG 58.220 52.381 0.00 0.00 0.00 3.61
703 714 2.370849 GGAGACACTACCCAAACAAGGA 59.629 50.000 0.00 0.00 0.00 3.36
704 715 3.557264 GGAGACACTACCCAAACAAGGAG 60.557 52.174 0.00 0.00 0.00 3.69
705 716 3.314693 AGACACTACCCAAACAAGGAGA 58.685 45.455 0.00 0.00 0.00 3.71
706 717 3.714798 AGACACTACCCAAACAAGGAGAA 59.285 43.478 0.00 0.00 0.00 2.87
707 718 4.065789 GACACTACCCAAACAAGGAGAAG 58.934 47.826 0.00 0.00 0.00 2.85
708 719 3.714798 ACACTACCCAAACAAGGAGAAGA 59.285 43.478 0.00 0.00 0.00 2.87
709 720 4.351111 ACACTACCCAAACAAGGAGAAGAT 59.649 41.667 0.00 0.00 0.00 2.40
710 721 4.697352 CACTACCCAAACAAGGAGAAGATG 59.303 45.833 0.00 0.00 0.00 2.90
711 722 2.519013 ACCCAAACAAGGAGAAGATGC 58.481 47.619 0.00 0.00 0.00 3.91
712 723 1.821136 CCCAAACAAGGAGAAGATGCC 59.179 52.381 0.00 0.00 0.00 4.40
713 724 2.517959 CCAAACAAGGAGAAGATGCCA 58.482 47.619 0.00 0.00 0.00 4.92
714 725 2.229784 CCAAACAAGGAGAAGATGCCAC 59.770 50.000 0.00 0.00 0.00 5.01
715 726 1.813513 AACAAGGAGAAGATGCCACG 58.186 50.000 0.00 0.00 0.00 4.94
716 727 0.674895 ACAAGGAGAAGATGCCACGC 60.675 55.000 0.00 0.00 0.00 5.34
717 728 0.392193 CAAGGAGAAGATGCCACGCT 60.392 55.000 0.00 0.00 0.00 5.07
718 729 0.392193 AAGGAGAAGATGCCACGCTG 60.392 55.000 0.00 0.00 0.00 5.18
719 730 1.078848 GGAGAAGATGCCACGCTGT 60.079 57.895 0.00 0.00 0.00 4.40
720 731 1.086634 GGAGAAGATGCCACGCTGTC 61.087 60.000 0.00 0.00 0.00 3.51
721 732 0.390340 GAGAAGATGCCACGCTGTCA 60.390 55.000 0.00 0.00 0.00 3.58
722 733 0.035317 AGAAGATGCCACGCTGTCAA 59.965 50.000 0.00 0.00 0.00 3.18
723 734 1.089920 GAAGATGCCACGCTGTCAAT 58.910 50.000 0.00 0.00 0.00 2.57
724 735 0.806868 AAGATGCCACGCTGTCAATG 59.193 50.000 0.00 0.00 0.00 2.82
725 736 0.321919 AGATGCCACGCTGTCAATGT 60.322 50.000 0.00 0.00 0.00 2.71
726 737 1.066215 AGATGCCACGCTGTCAATGTA 60.066 47.619 0.00 0.00 0.00 2.29
727 738 1.328680 GATGCCACGCTGTCAATGTAG 59.671 52.381 0.00 0.00 0.00 2.74
728 739 0.320050 TGCCACGCTGTCAATGTAGA 59.680 50.000 0.00 0.00 0.00 2.59
729 740 1.270571 TGCCACGCTGTCAATGTAGAA 60.271 47.619 0.00 0.00 0.00 2.10
730 741 1.394917 GCCACGCTGTCAATGTAGAAG 59.605 52.381 0.00 0.00 0.00 2.85
731 742 2.688507 CCACGCTGTCAATGTAGAAGT 58.311 47.619 0.00 0.00 0.00 3.01
732 743 2.413112 CCACGCTGTCAATGTAGAAGTG 59.587 50.000 0.00 0.00 0.00 3.16
733 744 2.413112 CACGCTGTCAATGTAGAAGTGG 59.587 50.000 0.00 0.00 0.00 4.00
734 745 2.299013 ACGCTGTCAATGTAGAAGTGGA 59.701 45.455 0.00 0.00 0.00 4.02
735 746 3.055819 ACGCTGTCAATGTAGAAGTGGAT 60.056 43.478 0.00 0.00 0.00 3.41
736 747 3.935203 CGCTGTCAATGTAGAAGTGGATT 59.065 43.478 0.00 0.00 0.00 3.01
737 748 4.393062 CGCTGTCAATGTAGAAGTGGATTT 59.607 41.667 0.00 0.00 0.00 2.17
738 749 5.106555 CGCTGTCAATGTAGAAGTGGATTTT 60.107 40.000 0.00 0.00 0.00 1.82
739 750 6.317857 GCTGTCAATGTAGAAGTGGATTTTC 58.682 40.000 0.00 0.00 0.00 2.29
740 751 6.150140 GCTGTCAATGTAGAAGTGGATTTTCT 59.850 38.462 0.00 0.00 38.40 2.52
741 752 7.439157 TGTCAATGTAGAAGTGGATTTTCTG 57.561 36.000 0.00 0.00 36.38 3.02
742 753 6.072508 TGTCAATGTAGAAGTGGATTTTCTGC 60.073 38.462 0.00 0.00 37.66 4.26
743 754 6.003326 TCAATGTAGAAGTGGATTTTCTGCA 58.997 36.000 7.93 7.93 46.34 4.41
745 756 5.885230 TGTAGAAGTGGATTTTCTGCATG 57.115 39.130 2.37 0.00 40.67 4.06
746 757 5.559770 TGTAGAAGTGGATTTTCTGCATGA 58.440 37.500 0.00 0.00 40.67 3.07
747 758 5.412594 TGTAGAAGTGGATTTTCTGCATGAC 59.587 40.000 0.00 0.00 40.67 3.06
748 759 4.401022 AGAAGTGGATTTTCTGCATGACA 58.599 39.130 0.00 0.00 33.79 3.58
826 837 1.215382 CGACATCGCCAACCTCTCA 59.785 57.895 0.00 0.00 0.00 3.27
837 848 0.193574 AACCTCTCACCCTTCCTCCA 59.806 55.000 0.00 0.00 0.00 3.86
838 849 0.252467 ACCTCTCACCCTTCCTCCAG 60.252 60.000 0.00 0.00 0.00 3.86
865 886 2.353208 CCACACTAGCTCACTTCACTCC 60.353 54.545 0.00 0.00 0.00 3.85
909 930 1.079266 CAGCTGGTCCAGTGAGCTC 60.079 63.158 20.24 6.82 41.19 4.09
912 933 0.952984 GCTGGTCCAGTGAGCTCAAC 60.953 60.000 20.19 12.98 39.75 3.18
925 946 1.891919 CTCAACACCACACACGGGG 60.892 63.158 0.00 0.00 34.65 5.73
1107 1129 3.827898 CCGCTCAGGGACCGTCTC 61.828 72.222 0.00 0.00 35.97 3.36
1380 1402 3.775654 CTGGACACGGAGGAGCCC 61.776 72.222 0.00 0.00 0.00 5.19
1620 1642 2.328639 GAGGATCTCGTCGACCGC 59.671 66.667 10.58 0.00 36.19 5.68
1899 1921 3.665675 CTTCGGGGGCTTCTCGGTG 62.666 68.421 0.56 0.00 0.00 4.94
2349 2371 2.358737 GCCAAGGAGGTGGTCGTG 60.359 66.667 0.00 0.00 41.12 4.35
2465 2487 3.438183 AGCCCAGCTGAAAATCAAATCT 58.562 40.909 17.39 0.00 37.57 2.40
2466 2488 3.446516 AGCCCAGCTGAAAATCAAATCTC 59.553 43.478 17.39 0.00 37.57 2.75
2467 2489 3.733077 GCCCAGCTGAAAATCAAATCTCG 60.733 47.826 17.39 0.00 0.00 4.04
2468 2490 3.441572 CCCAGCTGAAAATCAAATCTCGT 59.558 43.478 17.39 0.00 0.00 4.18
2469 2491 4.635765 CCCAGCTGAAAATCAAATCTCGTA 59.364 41.667 17.39 0.00 0.00 3.43
2470 2492 5.447818 CCCAGCTGAAAATCAAATCTCGTAC 60.448 44.000 17.39 0.00 0.00 3.67
2471 2493 5.352569 CCAGCTGAAAATCAAATCTCGTACT 59.647 40.000 17.39 0.00 0.00 2.73
2485 2507 2.068839 CGTACTGTACGTGCGTCTAG 57.931 55.000 27.27 3.77 45.05 2.43
2486 2508 1.267235 CGTACTGTACGTGCGTCTAGG 60.267 57.143 27.27 0.73 45.05 3.02
2487 2509 2.002586 GTACTGTACGTGCGTCTAGGA 58.997 52.381 0.00 0.00 0.00 2.94
2489 2511 1.881973 ACTGTACGTGCGTCTAGGAAA 59.118 47.619 0.00 0.00 0.00 3.13
2490 2512 2.490903 ACTGTACGTGCGTCTAGGAAAT 59.509 45.455 0.00 0.00 0.00 2.17
2491 2513 3.057033 ACTGTACGTGCGTCTAGGAAATT 60.057 43.478 0.00 0.00 0.00 1.82
2541 2566 0.961753 TTCACTCGCTCTGCTTCTGA 59.038 50.000 0.00 0.00 0.00 3.27
2542 2567 0.242286 TCACTCGCTCTGCTTCTGAC 59.758 55.000 0.00 0.00 0.00 3.51
2543 2568 0.735632 CACTCGCTCTGCTTCTGACC 60.736 60.000 0.00 0.00 0.00 4.02
2544 2569 0.897863 ACTCGCTCTGCTTCTGACCT 60.898 55.000 0.00 0.00 0.00 3.85
2545 2570 0.246086 CTCGCTCTGCTTCTGACCTT 59.754 55.000 0.00 0.00 0.00 3.50
2546 2571 0.244994 TCGCTCTGCTTCTGACCTTC 59.755 55.000 0.00 0.00 0.00 3.46
2547 2572 0.246086 CGCTCTGCTTCTGACCTTCT 59.754 55.000 0.00 0.00 0.00 2.85
2548 2573 1.724429 GCTCTGCTTCTGACCTTCTG 58.276 55.000 0.00 0.00 0.00 3.02
2563 2588 5.105187 TGACCTTCTGTTGATCGATCTCAAT 60.105 40.000 25.02 8.42 37.47 2.57
2673 2708 8.908786 AAATAAAATCGCAGAGGATATCTTGA 57.091 30.769 2.05 0.00 43.63 3.02
2682 2717 6.017026 CGCAGAGGATATCTTGAACTGTACTA 60.017 42.308 2.05 0.00 35.47 1.82
2683 2718 7.308891 CGCAGAGGATATCTTGAACTGTACTAT 60.309 40.741 2.05 0.00 35.47 2.12
2684 2719 9.015367 GCAGAGGATATCTTGAACTGTACTATA 57.985 37.037 2.05 0.00 35.47 1.31
2693 2728 8.818622 TCTTGAACTGTACTATATACCAGTGT 57.181 34.615 0.00 0.00 0.00 3.55
2751 2786 9.943163 GCTTGTATTTTCAGATTATCTTCTTCC 57.057 33.333 0.00 0.00 0.00 3.46
2760 2795 7.782049 TCAGATTATCTTCTTCCAACGTACAT 58.218 34.615 0.00 0.00 0.00 2.29
2763 2809 9.530633 AGATTATCTTCTTCCAACGTACATTAC 57.469 33.333 0.00 0.00 0.00 1.89
2782 2828 7.204604 ACATTACATTTGCATGTGTATGGATG 58.795 34.615 15.72 15.05 43.92 3.51
2788 2834 2.233271 GCATGTGTATGGATGGGAAGG 58.767 52.381 0.00 0.00 34.79 3.46
2790 2836 3.216800 CATGTGTATGGATGGGAAGGTG 58.783 50.000 0.00 0.00 0.00 4.00
2796 2842 0.630673 TGGATGGGAAGGTGGAATGG 59.369 55.000 0.00 0.00 0.00 3.16
2816 2862 1.597027 ACGGGAGTGGCAAGAAACG 60.597 57.895 0.00 0.00 44.82 3.60
2899 2945 1.298788 CAACGGGCGTGTTTGGTTC 60.299 57.895 0.00 0.00 0.00 3.62
2904 2950 1.388837 GGGCGTGTTTGGTTCCAGTT 61.389 55.000 0.00 0.00 0.00 3.16
2958 3004 4.078639 ACCCAGTCTGACTCTGAAAAAG 57.921 45.455 7.49 0.00 35.20 2.27
2974 3020 7.492524 TCTGAAAAAGTAGTCTCATATGCGAT 58.507 34.615 0.00 0.00 0.00 4.58
2977 3023 9.764363 TGAAAAAGTAGTCTCATATGCGATATT 57.236 29.630 0.00 0.00 0.00 1.28
3022 3068 6.328934 TGCATATGGACTTTCTGTATTAGGGA 59.671 38.462 4.56 0.00 0.00 4.20
3032 3078 9.232473 ACTTTCTGTATTAGGGAATCAACTTTC 57.768 33.333 0.00 0.00 0.00 2.62
3140 3187 3.431725 GCACTTAGCACACGGGGC 61.432 66.667 0.00 0.00 44.79 5.80
3161 3208 4.744795 CTAAGAGCTAGCAAAGGAAGGA 57.255 45.455 18.83 0.00 0.00 3.36
3163 3211 2.826488 AGAGCTAGCAAAGGAAGGAGA 58.174 47.619 18.83 0.00 0.00 3.71
3281 3331 1.731613 CGTCGGCGAACTAGTTGCA 60.732 57.895 14.14 0.00 41.33 4.08
3287 3338 0.670546 GCGAACTAGTTGCAGGCTCA 60.671 55.000 14.14 0.00 0.00 4.26
3289 3340 1.605457 CGAACTAGTTGCAGGCTCACA 60.605 52.381 14.14 0.00 0.00 3.58
3294 3345 4.003648 ACTAGTTGCAGGCTCACATAAAC 58.996 43.478 0.00 0.00 0.00 2.01
3328 3379 1.449246 GGAGAATGCAGTGCTCGCT 60.449 57.895 17.60 10.13 0.00 4.93
3421 3473 1.000993 GGGTGAGAGAGAGGAGGCA 59.999 63.158 0.00 0.00 0.00 4.75
3429 3481 3.448934 AGAGAGAGGAGGCAAAGATGAA 58.551 45.455 0.00 0.00 0.00 2.57
3430 3482 3.451902 AGAGAGAGGAGGCAAAGATGAAG 59.548 47.826 0.00 0.00 0.00 3.02
3431 3483 2.504996 AGAGAGGAGGCAAAGATGAAGG 59.495 50.000 0.00 0.00 0.00 3.46
3432 3484 2.503356 GAGAGGAGGCAAAGATGAAGGA 59.497 50.000 0.00 0.00 0.00 3.36
3433 3485 2.915604 AGAGGAGGCAAAGATGAAGGAA 59.084 45.455 0.00 0.00 0.00 3.36
3434 3486 3.331889 AGAGGAGGCAAAGATGAAGGAAA 59.668 43.478 0.00 0.00 0.00 3.13
3435 3487 4.017683 AGAGGAGGCAAAGATGAAGGAAAT 60.018 41.667 0.00 0.00 0.00 2.17
3436 3488 4.681484 AGGAGGCAAAGATGAAGGAAATT 58.319 39.130 0.00 0.00 0.00 1.82
3437 3489 5.089434 AGGAGGCAAAGATGAAGGAAATTT 58.911 37.500 0.00 0.00 0.00 1.82
3438 3490 5.046807 AGGAGGCAAAGATGAAGGAAATTTG 60.047 40.000 0.00 0.00 34.70 2.32
3439 3491 5.047092 GGAGGCAAAGATGAAGGAAATTTGA 60.047 40.000 0.00 0.00 33.69 2.69
3440 3492 6.423776 AGGCAAAGATGAAGGAAATTTGAA 57.576 33.333 0.00 0.00 33.69 2.69
3441 3493 6.829849 AGGCAAAGATGAAGGAAATTTGAAA 58.170 32.000 0.00 0.00 33.69 2.69
3442 3494 7.455891 AGGCAAAGATGAAGGAAATTTGAAAT 58.544 30.769 0.00 0.00 33.69 2.17
3443 3495 7.389607 AGGCAAAGATGAAGGAAATTTGAAATG 59.610 33.333 0.00 0.00 33.69 2.32
3444 3496 7.388500 GGCAAAGATGAAGGAAATTTGAAATGA 59.612 33.333 0.00 0.00 33.69 2.57
3445 3497 8.943002 GCAAAGATGAAGGAAATTTGAAATGAT 58.057 29.630 0.00 0.00 33.69 2.45
3447 3499 8.922058 AAGATGAAGGAAATTTGAAATGATCG 57.078 30.769 0.00 0.00 0.00 3.69
3448 3500 8.284945 AGATGAAGGAAATTTGAAATGATCGA 57.715 30.769 0.00 0.00 0.00 3.59
3449 3501 8.186821 AGATGAAGGAAATTTGAAATGATCGAC 58.813 33.333 0.00 0.00 0.00 4.20
3450 3502 6.620678 TGAAGGAAATTTGAAATGATCGACC 58.379 36.000 0.00 0.00 0.00 4.79
3451 3503 5.235305 AGGAAATTTGAAATGATCGACCG 57.765 39.130 0.00 0.00 0.00 4.79
3452 3504 4.700213 AGGAAATTTGAAATGATCGACCGT 59.300 37.500 0.00 0.00 0.00 4.83
3453 3505 4.793216 GGAAATTTGAAATGATCGACCGTG 59.207 41.667 0.00 0.00 0.00 4.94
3454 3506 2.892373 TTTGAAATGATCGACCGTGC 57.108 45.000 0.00 0.00 0.00 5.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.502979 GGTCCCTTTGCGTTGTATTTGTA 59.497 43.478 0.00 0.00 0.00 2.41
3 4 2.556622 CAGGTCCCTTTGCGTTGTATTT 59.443 45.455 0.00 0.00 0.00 1.40
4 5 2.159382 CAGGTCCCTTTGCGTTGTATT 58.841 47.619 0.00 0.00 0.00 1.89
5 6 1.821216 CAGGTCCCTTTGCGTTGTAT 58.179 50.000 0.00 0.00 0.00 2.29
6 7 0.887387 GCAGGTCCCTTTGCGTTGTA 60.887 55.000 0.00 0.00 0.00 2.41
7 8 2.193536 GCAGGTCCCTTTGCGTTGT 61.194 57.895 0.00 0.00 0.00 3.32
8 9 2.644992 GCAGGTCCCTTTGCGTTG 59.355 61.111 0.00 0.00 0.00 4.10
9 10 2.597510 GGCAGGTCCCTTTGCGTT 60.598 61.111 0.00 0.00 41.17 4.84
18 19 1.685180 GGATTGGTTTAGGGCAGGTCC 60.685 57.143 0.00 0.00 0.00 4.46
19 20 1.685180 GGGATTGGTTTAGGGCAGGTC 60.685 57.143 0.00 0.00 0.00 3.85
20 21 0.335019 GGGATTGGTTTAGGGCAGGT 59.665 55.000 0.00 0.00 0.00 4.00
21 22 0.397114 GGGGATTGGTTTAGGGCAGG 60.397 60.000 0.00 0.00 0.00 4.85
22 23 0.334676 TGGGGATTGGTTTAGGGCAG 59.665 55.000 0.00 0.00 0.00 4.85
23 24 0.787084 TTGGGGATTGGTTTAGGGCA 59.213 50.000 0.00 0.00 0.00 5.36
24 25 1.485124 CTTGGGGATTGGTTTAGGGC 58.515 55.000 0.00 0.00 0.00 5.19
25 26 1.485124 GCTTGGGGATTGGTTTAGGG 58.515 55.000 0.00 0.00 0.00 3.53
26 27 1.485124 GGCTTGGGGATTGGTTTAGG 58.515 55.000 0.00 0.00 0.00 2.69
27 28 1.102978 CGGCTTGGGGATTGGTTTAG 58.897 55.000 0.00 0.00 0.00 1.85
28 29 0.968393 GCGGCTTGGGGATTGGTTTA 60.968 55.000 0.00 0.00 0.00 2.01
29 30 2.282783 GCGGCTTGGGGATTGGTTT 61.283 57.895 0.00 0.00 0.00 3.27
30 31 2.679996 GCGGCTTGGGGATTGGTT 60.680 61.111 0.00 0.00 0.00 3.67
31 32 4.759205 GGCGGCTTGGGGATTGGT 62.759 66.667 0.00 0.00 0.00 3.67
32 33 4.447342 AGGCGGCTTGGGGATTGG 62.447 66.667 5.25 0.00 0.00 3.16
33 34 2.830370 GAGGCGGCTTGGGGATTG 60.830 66.667 14.76 0.00 0.00 2.67
34 35 2.616458 AAGAGGCGGCTTGGGGATT 61.616 57.895 14.76 0.00 0.00 3.01
35 36 3.017581 AAGAGGCGGCTTGGGGAT 61.018 61.111 14.76 0.00 0.00 3.85
36 37 4.033776 CAAGAGGCGGCTTGGGGA 62.034 66.667 14.76 0.00 41.15 4.81
37 38 4.033776 TCAAGAGGCGGCTTGGGG 62.034 66.667 14.76 3.63 44.14 4.96
38 39 2.747855 GTCAAGAGGCGGCTTGGG 60.748 66.667 14.76 5.62 44.14 4.12
39 40 1.580845 CTTGTCAAGAGGCGGCTTGG 61.581 60.000 14.76 6.02 44.14 3.61
40 41 1.871772 CTTGTCAAGAGGCGGCTTG 59.128 57.895 14.76 8.88 45.10 4.01
41 42 1.968540 GCTTGTCAAGAGGCGGCTT 60.969 57.895 14.76 0.00 0.00 4.35
42 43 2.359230 GCTTGTCAAGAGGCGGCT 60.359 61.111 13.09 13.09 0.00 5.52
43 44 2.669569 TGCTTGTCAAGAGGCGGC 60.670 61.111 16.99 0.00 0.00 6.53
44 45 2.328099 GGTGCTTGTCAAGAGGCGG 61.328 63.158 16.99 0.00 0.00 6.13
45 46 2.671177 CGGTGCTTGTCAAGAGGCG 61.671 63.158 16.99 0.00 0.00 5.52
46 47 2.328099 CCGGTGCTTGTCAAGAGGC 61.328 63.158 16.99 2.52 0.00 4.70
47 48 0.951040 GACCGGTGCTTGTCAAGAGG 60.951 60.000 14.63 14.17 0.00 3.69
48 49 0.249868 TGACCGGTGCTTGTCAAGAG 60.250 55.000 14.63 4.13 38.48 2.85
49 50 0.531974 GTGACCGGTGCTTGTCAAGA 60.532 55.000 14.63 0.00 42.67 3.02
50 51 1.507141 GGTGACCGGTGCTTGTCAAG 61.507 60.000 14.63 8.31 42.67 3.02
51 52 1.525077 GGTGACCGGTGCTTGTCAA 60.525 57.895 14.63 0.00 42.67 3.18
52 53 1.978455 AAGGTGACCGGTGCTTGTCA 61.978 55.000 14.63 0.00 39.08 3.58
53 54 1.227853 AAGGTGACCGGTGCTTGTC 60.228 57.895 14.63 0.00 0.00 3.18
54 55 1.525995 CAAGGTGACCGGTGCTTGT 60.526 57.895 14.63 0.00 0.00 3.16
55 56 0.817634 TTCAAGGTGACCGGTGCTTG 60.818 55.000 14.63 10.95 0.00 4.01
56 57 0.535102 CTTCAAGGTGACCGGTGCTT 60.535 55.000 14.63 0.00 0.00 3.91
57 58 1.071471 CTTCAAGGTGACCGGTGCT 59.929 57.895 14.63 0.00 0.00 4.40
58 59 0.321653 ATCTTCAAGGTGACCGGTGC 60.322 55.000 14.63 4.10 0.00 5.01
59 60 3.328382 TTATCTTCAAGGTGACCGGTG 57.672 47.619 14.63 0.00 0.00 4.94
60 61 4.261801 CATTTATCTTCAAGGTGACCGGT 58.738 43.478 6.92 6.92 0.00 5.28
61 62 4.261801 ACATTTATCTTCAAGGTGACCGG 58.738 43.478 0.00 0.00 0.00 5.28
62 63 5.178797 AGACATTTATCTTCAAGGTGACCG 58.821 41.667 0.00 0.00 0.00 4.79
63 64 7.454260 AAAGACATTTATCTTCAAGGTGACC 57.546 36.000 0.00 0.00 37.99 4.02
64 65 9.827411 GTTAAAGACATTTATCTTCAAGGTGAC 57.173 33.333 0.00 0.00 37.99 3.67
65 66 9.793259 AGTTAAAGACATTTATCTTCAAGGTGA 57.207 29.630 0.00 0.00 37.99 4.02
66 67 9.831737 CAGTTAAAGACATTTATCTTCAAGGTG 57.168 33.333 0.00 0.00 37.99 4.00
67 68 9.793259 TCAGTTAAAGACATTTATCTTCAAGGT 57.207 29.630 0.00 0.00 37.99 3.50
78 79 7.706607 GCAAGGAAAGTTCAGTTAAAGACATTT 59.293 33.333 0.00 0.00 0.00 2.32
79 80 7.203218 GCAAGGAAAGTTCAGTTAAAGACATT 58.797 34.615 0.00 0.00 0.00 2.71
80 81 6.239036 GGCAAGGAAAGTTCAGTTAAAGACAT 60.239 38.462 0.00 0.00 0.00 3.06
81 82 5.067283 GGCAAGGAAAGTTCAGTTAAAGACA 59.933 40.000 0.00 0.00 0.00 3.41
82 83 5.067283 TGGCAAGGAAAGTTCAGTTAAAGAC 59.933 40.000 0.00 0.00 0.00 3.01
83 84 5.197451 TGGCAAGGAAAGTTCAGTTAAAGA 58.803 37.500 0.00 0.00 0.00 2.52
84 85 5.514274 TGGCAAGGAAAGTTCAGTTAAAG 57.486 39.130 0.00 0.00 0.00 1.85
85 86 5.923733 TTGGCAAGGAAAGTTCAGTTAAA 57.076 34.783 0.00 0.00 0.00 1.52
86 87 5.394773 GGTTTGGCAAGGAAAGTTCAGTTAA 60.395 40.000 0.00 0.00 0.00 2.01
87 88 4.098807 GGTTTGGCAAGGAAAGTTCAGTTA 59.901 41.667 0.00 0.00 0.00 2.24
88 89 3.118775 GGTTTGGCAAGGAAAGTTCAGTT 60.119 43.478 0.00 0.00 0.00 3.16
89 90 2.430694 GGTTTGGCAAGGAAAGTTCAGT 59.569 45.455 0.00 0.00 0.00 3.41
90 91 2.430332 TGGTTTGGCAAGGAAAGTTCAG 59.570 45.455 0.00 0.00 0.00 3.02
91 92 2.167487 GTGGTTTGGCAAGGAAAGTTCA 59.833 45.455 0.00 0.00 0.00 3.18
92 93 2.483013 GGTGGTTTGGCAAGGAAAGTTC 60.483 50.000 0.00 0.00 0.00 3.01
93 94 1.484653 GGTGGTTTGGCAAGGAAAGTT 59.515 47.619 0.00 0.00 0.00 2.66
94 95 1.119684 GGTGGTTTGGCAAGGAAAGT 58.880 50.000 0.00 0.00 0.00 2.66
95 96 1.118838 TGGTGGTTTGGCAAGGAAAG 58.881 50.000 0.00 0.00 0.00 2.62
96 97 1.799933 ATGGTGGTTTGGCAAGGAAA 58.200 45.000 0.00 0.00 0.00 3.13
97 98 1.415659 CAATGGTGGTTTGGCAAGGAA 59.584 47.619 0.00 0.00 0.00 3.36
98 99 1.047002 CAATGGTGGTTTGGCAAGGA 58.953 50.000 0.00 0.00 0.00 3.36
99 100 1.047002 TCAATGGTGGTTTGGCAAGG 58.953 50.000 0.00 0.00 0.00 3.61
100 101 2.906691 TTCAATGGTGGTTTGGCAAG 57.093 45.000 0.00 0.00 0.00 4.01
101 102 2.809665 GCATTCAATGGTGGTTTGGCAA 60.810 45.455 0.00 0.00 0.00 4.52
102 103 1.270732 GCATTCAATGGTGGTTTGGCA 60.271 47.619 0.00 0.00 0.00 4.92
103 104 1.441738 GCATTCAATGGTGGTTTGGC 58.558 50.000 0.00 0.00 0.00 4.52
104 105 1.338960 GGGCATTCAATGGTGGTTTGG 60.339 52.381 0.00 0.00 0.00 3.28
105 106 1.347050 TGGGCATTCAATGGTGGTTTG 59.653 47.619 0.00 0.00 0.00 2.93
106 107 1.727062 TGGGCATTCAATGGTGGTTT 58.273 45.000 0.00 0.00 0.00 3.27
107 108 1.624813 CTTGGGCATTCAATGGTGGTT 59.375 47.619 0.00 0.00 0.00 3.67
108 109 1.203162 TCTTGGGCATTCAATGGTGGT 60.203 47.619 0.00 0.00 0.00 4.16
109 110 1.479323 CTCTTGGGCATTCAATGGTGG 59.521 52.381 0.00 0.00 0.00 4.61
110 111 2.449464 TCTCTTGGGCATTCAATGGTG 58.551 47.619 0.00 0.00 0.00 4.17
111 112 2.905415 TCTCTTGGGCATTCAATGGT 57.095 45.000 0.00 0.00 0.00 3.55
112 113 3.359033 TCTTCTCTTGGGCATTCAATGG 58.641 45.455 0.00 0.00 0.00 3.16
113 114 4.142227 CCTTCTTCTCTTGGGCATTCAATG 60.142 45.833 0.00 0.00 0.00 2.82
114 115 4.021916 CCTTCTTCTCTTGGGCATTCAAT 58.978 43.478 0.00 0.00 0.00 2.57
115 116 3.074390 TCCTTCTTCTCTTGGGCATTCAA 59.926 43.478 0.00 0.00 0.00 2.69
116 117 2.644299 TCCTTCTTCTCTTGGGCATTCA 59.356 45.455 0.00 0.00 0.00 2.57
117 118 3.356529 TCCTTCTTCTCTTGGGCATTC 57.643 47.619 0.00 0.00 0.00 2.67
118 119 3.563043 CCTTCCTTCTTCTCTTGGGCATT 60.563 47.826 0.00 0.00 0.00 3.56
119 120 2.025510 CCTTCCTTCTTCTCTTGGGCAT 60.026 50.000 0.00 0.00 0.00 4.40
120 121 1.352352 CCTTCCTTCTTCTCTTGGGCA 59.648 52.381 0.00 0.00 0.00 5.36
121 122 1.352687 ACCTTCCTTCTTCTCTTGGGC 59.647 52.381 0.00 0.00 0.00 5.36
122 123 4.097418 TCTACCTTCCTTCTTCTCTTGGG 58.903 47.826 0.00 0.00 0.00 4.12
123 124 5.396213 CCATCTACCTTCCTTCTTCTCTTGG 60.396 48.000 0.00 0.00 0.00 3.61
124 125 5.669477 CCATCTACCTTCCTTCTTCTCTTG 58.331 45.833 0.00 0.00 0.00 3.02
125 126 4.163268 GCCATCTACCTTCCTTCTTCTCTT 59.837 45.833 0.00 0.00 0.00 2.85
126 127 3.709141 GCCATCTACCTTCCTTCTTCTCT 59.291 47.826 0.00 0.00 0.00 3.10
127 128 3.491792 CGCCATCTACCTTCCTTCTTCTC 60.492 52.174 0.00 0.00 0.00 2.87
128 129 2.432510 CGCCATCTACCTTCCTTCTTCT 59.567 50.000 0.00 0.00 0.00 2.85
129 130 2.483889 CCGCCATCTACCTTCCTTCTTC 60.484 54.545 0.00 0.00 0.00 2.87
130 131 1.486726 CCGCCATCTACCTTCCTTCTT 59.513 52.381 0.00 0.00 0.00 2.52
131 132 1.123928 CCGCCATCTACCTTCCTTCT 58.876 55.000 0.00 0.00 0.00 2.85
132 133 0.106894 CCCGCCATCTACCTTCCTTC 59.893 60.000 0.00 0.00 0.00 3.46
133 134 0.326238 TCCCGCCATCTACCTTCCTT 60.326 55.000 0.00 0.00 0.00 3.36
134 135 1.049289 GTCCCGCCATCTACCTTCCT 61.049 60.000 0.00 0.00 0.00 3.36
135 136 1.049289 AGTCCCGCCATCTACCTTCC 61.049 60.000 0.00 0.00 0.00 3.46
136 137 0.389757 GAGTCCCGCCATCTACCTTC 59.610 60.000 0.00 0.00 0.00 3.46
137 138 1.392710 CGAGTCCCGCCATCTACCTT 61.393 60.000 0.00 0.00 0.00 3.50
138 139 1.828660 CGAGTCCCGCCATCTACCT 60.829 63.158 0.00 0.00 0.00 3.08
139 140 1.179814 ATCGAGTCCCGCCATCTACC 61.180 60.000 0.00 0.00 38.37 3.18
140 141 0.674534 AATCGAGTCCCGCCATCTAC 59.325 55.000 0.00 0.00 38.37 2.59
141 142 1.068588 CAAATCGAGTCCCGCCATCTA 59.931 52.381 0.00 0.00 38.37 1.98
142 143 0.179073 CAAATCGAGTCCCGCCATCT 60.179 55.000 0.00 0.00 38.37 2.90
143 144 0.462047 ACAAATCGAGTCCCGCCATC 60.462 55.000 0.00 0.00 38.37 3.51
144 145 0.462047 GACAAATCGAGTCCCGCCAT 60.462 55.000 0.00 0.00 38.37 4.40
145 146 1.079405 GACAAATCGAGTCCCGCCA 60.079 57.895 0.00 0.00 38.37 5.69
146 147 3.795638 GACAAATCGAGTCCCGCC 58.204 61.111 0.00 0.00 38.37 6.13
151 152 2.649331 TTCTCGGGACAAATCGAGTC 57.351 50.000 11.59 0.00 42.38 3.36
152 153 2.612221 GGTTTCTCGGGACAAATCGAGT 60.612 50.000 11.59 0.00 42.38 4.18
153 154 2.000447 GGTTTCTCGGGACAAATCGAG 59.000 52.381 6.42 6.42 42.38 4.04
154 155 1.345089 TGGTTTCTCGGGACAAATCGA 59.655 47.619 0.00 0.00 0.00 3.59
155 156 1.803334 TGGTTTCTCGGGACAAATCG 58.197 50.000 0.00 0.00 0.00 3.34
156 157 2.351726 CGATGGTTTCTCGGGACAAATC 59.648 50.000 0.00 0.00 32.58 2.17
157 158 2.290071 ACGATGGTTTCTCGGGACAAAT 60.290 45.455 0.00 0.00 40.37 2.32
158 159 1.071071 ACGATGGTTTCTCGGGACAAA 59.929 47.619 0.00 0.00 40.37 2.83
159 160 0.682852 ACGATGGTTTCTCGGGACAA 59.317 50.000 0.00 0.00 40.37 3.18
160 161 0.245539 GACGATGGTTTCTCGGGACA 59.754 55.000 0.00 0.00 40.37 4.02
161 162 0.531200 AGACGATGGTTTCTCGGGAC 59.469 55.000 0.00 0.00 40.37 4.46
162 163 1.067142 CAAGACGATGGTTTCTCGGGA 60.067 52.381 0.00 0.00 40.37 5.14
163 164 1.359848 CAAGACGATGGTTTCTCGGG 58.640 55.000 0.00 0.00 40.37 5.14
164 165 1.067142 TCCAAGACGATGGTTTCTCGG 60.067 52.381 0.00 0.00 41.46 4.63
165 166 1.993370 GTCCAAGACGATGGTTTCTCG 59.007 52.381 0.00 0.00 41.46 4.04
166 167 3.254892 GAGTCCAAGACGATGGTTTCTC 58.745 50.000 0.00 2.28 41.46 2.87
167 168 2.632996 TGAGTCCAAGACGATGGTTTCT 59.367 45.455 0.00 0.00 41.46 2.52
168 169 2.737252 GTGAGTCCAAGACGATGGTTTC 59.263 50.000 0.00 0.00 41.46 2.78
169 170 2.550208 GGTGAGTCCAAGACGATGGTTT 60.550 50.000 0.00 0.00 41.46 3.27
170 171 1.002087 GGTGAGTCCAAGACGATGGTT 59.998 52.381 0.00 0.00 41.46 3.67
171 172 0.608640 GGTGAGTCCAAGACGATGGT 59.391 55.000 0.00 0.00 41.46 3.55
172 173 0.458543 CGGTGAGTCCAAGACGATGG 60.459 60.000 0.00 0.00 42.12 3.51
173 174 0.526211 TCGGTGAGTCCAAGACGATG 59.474 55.000 0.00 0.00 37.67 3.84
192 193 1.676006 GGGCGCTATGTATGCAAGTTT 59.324 47.619 7.64 0.00 0.00 2.66
195 196 1.198408 CATGGGCGCTATGTATGCAAG 59.802 52.381 7.64 0.00 0.00 4.01
234 235 1.079750 GGTTCTCTGGTGCTCGTCC 60.080 63.158 0.00 0.00 0.00 4.79
245 246 4.406003 GGAGTATATGTGTGGTGGTTCTCT 59.594 45.833 0.00 0.00 0.00 3.10
281 282 1.337703 CTGTTGGGAACATGGTGTGTG 59.662 52.381 0.00 0.00 41.14 3.82
286 287 3.222603 GTTTCTCTGTTGGGAACATGGT 58.777 45.455 0.00 0.00 41.26 3.55
287 288 2.226437 CGTTTCTCTGTTGGGAACATGG 59.774 50.000 0.00 0.00 41.26 3.66
288 289 3.058914 GTCGTTTCTCTGTTGGGAACATG 60.059 47.826 0.00 0.00 41.26 3.21
292 293 2.557317 GTGTCGTTTCTCTGTTGGGAA 58.443 47.619 0.00 0.00 0.00 3.97
304 305 1.263217 GCGATGTCTTTGGTGTCGTTT 59.737 47.619 0.00 0.00 34.97 3.60
312 313 0.734889 GGTCATGGCGATGTCTTTGG 59.265 55.000 8.66 0.00 0.00 3.28
319 320 0.949397 CCAGATTGGTCATGGCGATG 59.051 55.000 1.66 1.66 31.35 3.84
320 321 3.409201 CCAGATTGGTCATGGCGAT 57.591 52.632 0.00 0.00 31.35 4.58
321 322 4.961637 CCAGATTGGTCATGGCGA 57.038 55.556 0.00 0.00 31.35 5.54
328 329 1.021390 CGGTCTGTGCCAGATTGGTC 61.021 60.000 7.95 0.00 42.73 4.02
329 330 1.003355 CGGTCTGTGCCAGATTGGT 60.003 57.895 7.95 0.00 42.73 3.67
347 348 1.092348 GTTTGGGTAATGTCTCCGGC 58.908 55.000 0.00 0.00 0.00 6.13
350 360 3.089284 CCCTTGTTTGGGTAATGTCTCC 58.911 50.000 0.00 0.00 42.25 3.71
357 367 1.835895 TCTCCCCCTTGTTTGGGTAA 58.164 50.000 0.00 0.00 45.70 2.85
358 368 1.638589 CATCTCCCCCTTGTTTGGGTA 59.361 52.381 0.00 0.00 45.70 3.69
363 373 1.000896 CGGCATCTCCCCCTTGTTT 60.001 57.895 0.00 0.00 0.00 2.83
365 375 3.411517 CCGGCATCTCCCCCTTGT 61.412 66.667 0.00 0.00 0.00 3.16
393 404 2.125512 CCCTTCTTGGAGGCGTCG 60.126 66.667 0.00 0.00 38.35 5.12
406 417 4.324991 GTGGGCGTCGTTCCCCTT 62.325 66.667 7.77 0.00 43.24 3.95
425 436 3.272334 GATGGTGGCGATGGCGTC 61.272 66.667 0.00 0.00 43.78 5.19
426 437 3.405093 ATGATGGTGGCGATGGCGT 62.405 57.895 0.00 0.00 41.24 5.68
457 468 2.675844 CGTTACTGATGAAAATCCGGCA 59.324 45.455 0.00 0.00 0.00 5.69
478 489 0.031010 AGGGGTGGGAGGTATGAGAC 60.031 60.000 0.00 0.00 0.00 3.36
479 490 0.264955 GAGGGGTGGGAGGTATGAGA 59.735 60.000 0.00 0.00 0.00 3.27
480 491 0.764752 GGAGGGGTGGGAGGTATGAG 60.765 65.000 0.00 0.00 0.00 2.90
481 492 1.316969 GGAGGGGTGGGAGGTATGA 59.683 63.158 0.00 0.00 0.00 2.15
482 493 1.770518 GGGAGGGGTGGGAGGTATG 60.771 68.421 0.00 0.00 0.00 2.39
483 494 1.623067 ATGGGAGGGGTGGGAGGTAT 61.623 60.000 0.00 0.00 0.00 2.73
484 495 2.265890 GATGGGAGGGGTGGGAGGTA 62.266 65.000 0.00 0.00 0.00 3.08
507 518 1.149174 CATTGACCGGATCCCCCAG 59.851 63.158 9.46 0.00 34.14 4.45
567 578 2.446036 AGGATCACGTAGGCCCCC 60.446 66.667 0.00 0.00 0.00 5.40
571 582 0.468400 AGGGAGAGGATCACGTAGGC 60.468 60.000 0.00 0.00 35.97 3.93
572 583 1.144093 AGAGGGAGAGGATCACGTAGG 59.856 57.143 0.00 0.00 35.97 3.18
573 584 2.649531 AGAGGGAGAGGATCACGTAG 57.350 55.000 0.00 0.00 35.97 3.51
574 585 4.104261 TCAATAGAGGGAGAGGATCACGTA 59.896 45.833 0.00 0.00 35.97 3.57
575 586 3.117474 TCAATAGAGGGAGAGGATCACGT 60.117 47.826 0.00 0.00 35.97 4.49
576 587 3.254657 GTCAATAGAGGGAGAGGATCACG 59.745 52.174 0.00 0.00 35.97 4.35
577 588 4.219115 TGTCAATAGAGGGAGAGGATCAC 58.781 47.826 0.00 0.00 37.82 3.06
578 589 4.542906 TGTCAATAGAGGGAGAGGATCA 57.457 45.455 0.00 0.00 37.82 2.92
579 590 5.332743 AGATGTCAATAGAGGGAGAGGATC 58.667 45.833 0.00 0.00 0.00 3.36
580 591 5.332743 GAGATGTCAATAGAGGGAGAGGAT 58.667 45.833 0.00 0.00 0.00 3.24
581 592 4.448493 GGAGATGTCAATAGAGGGAGAGGA 60.448 50.000 0.00 0.00 0.00 3.71
582 593 3.831911 GGAGATGTCAATAGAGGGAGAGG 59.168 52.174 0.00 0.00 0.00 3.69
583 594 4.280677 GTGGAGATGTCAATAGAGGGAGAG 59.719 50.000 0.00 0.00 0.00 3.20
584 595 4.219115 GTGGAGATGTCAATAGAGGGAGA 58.781 47.826 0.00 0.00 0.00 3.71
585 596 3.963374 TGTGGAGATGTCAATAGAGGGAG 59.037 47.826 0.00 0.00 0.00 4.30
586 597 3.706594 GTGTGGAGATGTCAATAGAGGGA 59.293 47.826 0.00 0.00 0.00 4.20
587 598 3.491619 CGTGTGGAGATGTCAATAGAGGG 60.492 52.174 0.00 0.00 0.00 4.30
588 599 3.711086 CGTGTGGAGATGTCAATAGAGG 58.289 50.000 0.00 0.00 0.00 3.69
589 600 3.119291 GCGTGTGGAGATGTCAATAGAG 58.881 50.000 0.00 0.00 0.00 2.43
590 601 2.479560 CGCGTGTGGAGATGTCAATAGA 60.480 50.000 0.00 0.00 0.00 1.98
591 602 1.854743 CGCGTGTGGAGATGTCAATAG 59.145 52.381 0.00 0.00 0.00 1.73
592 603 1.474879 TCGCGTGTGGAGATGTCAATA 59.525 47.619 5.77 0.00 0.00 1.90
593 604 0.246360 TCGCGTGTGGAGATGTCAAT 59.754 50.000 5.77 0.00 0.00 2.57
594 605 0.246360 ATCGCGTGTGGAGATGTCAA 59.754 50.000 5.77 0.00 33.58 3.18
595 606 0.458370 CATCGCGTGTGGAGATGTCA 60.458 55.000 5.77 0.00 44.87 3.58
596 607 2.291843 CATCGCGTGTGGAGATGTC 58.708 57.895 5.77 0.00 44.87 3.06
597 608 4.502263 CATCGCGTGTGGAGATGT 57.498 55.556 5.77 0.00 44.87 3.06
599 610 0.807667 GAAGCATCGCGTGTGGAGAT 60.808 55.000 5.77 0.00 35.35 2.75
600 611 1.446099 GAAGCATCGCGTGTGGAGA 60.446 57.895 5.77 0.00 0.00 3.71
601 612 2.456119 GGAAGCATCGCGTGTGGAG 61.456 63.158 5.77 0.00 0.00 3.86
602 613 2.434185 GGAAGCATCGCGTGTGGA 60.434 61.111 5.77 0.00 0.00 4.02
603 614 1.647545 ATTGGAAGCATCGCGTGTGG 61.648 55.000 5.77 0.00 0.00 4.17
604 615 1.004610 CTATTGGAAGCATCGCGTGTG 60.005 52.381 5.77 8.00 0.00 3.82
605 616 1.134818 TCTATTGGAAGCATCGCGTGT 60.135 47.619 5.77 0.00 0.00 4.49
606 617 1.524355 CTCTATTGGAAGCATCGCGTG 59.476 52.381 5.77 5.06 0.00 5.34
607 618 1.409064 TCTCTATTGGAAGCATCGCGT 59.591 47.619 5.77 0.00 0.00 6.01
608 619 2.140065 TCTCTATTGGAAGCATCGCG 57.860 50.000 0.00 0.00 0.00 5.87
609 620 4.060900 TGATTCTCTATTGGAAGCATCGC 58.939 43.478 0.00 0.00 34.77 4.58
610 621 5.525012 TGTTGATTCTCTATTGGAAGCATCG 59.475 40.000 0.00 0.00 38.57 3.84
611 622 6.238593 GGTGTTGATTCTCTATTGGAAGCATC 60.239 42.308 0.00 0.00 38.57 3.91
612 623 5.591877 GGTGTTGATTCTCTATTGGAAGCAT 59.408 40.000 0.00 0.00 38.57 3.79
613 624 4.943705 GGTGTTGATTCTCTATTGGAAGCA 59.056 41.667 0.00 0.00 37.32 3.91
614 625 4.943705 TGGTGTTGATTCTCTATTGGAAGC 59.056 41.667 0.00 0.00 0.00 3.86
615 626 7.391554 TCTTTGGTGTTGATTCTCTATTGGAAG 59.608 37.037 0.00 0.00 0.00 3.46
616 627 7.174946 GTCTTTGGTGTTGATTCTCTATTGGAA 59.825 37.037 0.00 0.00 0.00 3.53
617 628 6.655003 GTCTTTGGTGTTGATTCTCTATTGGA 59.345 38.462 0.00 0.00 0.00 3.53
618 629 6.430925 TGTCTTTGGTGTTGATTCTCTATTGG 59.569 38.462 0.00 0.00 0.00 3.16
619 630 7.301054 GTGTCTTTGGTGTTGATTCTCTATTG 58.699 38.462 0.00 0.00 0.00 1.90
620 631 6.431234 GGTGTCTTTGGTGTTGATTCTCTATT 59.569 38.462 0.00 0.00 0.00 1.73
621 632 5.940470 GGTGTCTTTGGTGTTGATTCTCTAT 59.060 40.000 0.00 0.00 0.00 1.98
622 633 5.305585 GGTGTCTTTGGTGTTGATTCTCTA 58.694 41.667 0.00 0.00 0.00 2.43
623 634 4.137543 GGTGTCTTTGGTGTTGATTCTCT 58.862 43.478 0.00 0.00 0.00 3.10
624 635 3.058914 CGGTGTCTTTGGTGTTGATTCTC 60.059 47.826 0.00 0.00 0.00 2.87
625 636 2.878406 CGGTGTCTTTGGTGTTGATTCT 59.122 45.455 0.00 0.00 0.00 2.40
626 637 2.604614 GCGGTGTCTTTGGTGTTGATTC 60.605 50.000 0.00 0.00 0.00 2.52
627 638 1.336755 GCGGTGTCTTTGGTGTTGATT 59.663 47.619 0.00 0.00 0.00 2.57
628 639 0.951558 GCGGTGTCTTTGGTGTTGAT 59.048 50.000 0.00 0.00 0.00 2.57
629 640 1.098712 GGCGGTGTCTTTGGTGTTGA 61.099 55.000 0.00 0.00 0.00 3.18
630 641 1.358759 GGCGGTGTCTTTGGTGTTG 59.641 57.895 0.00 0.00 0.00 3.33
631 642 0.467290 ATGGCGGTGTCTTTGGTGTT 60.467 50.000 0.00 0.00 0.00 3.32
632 643 1.150536 ATGGCGGTGTCTTTGGTGT 59.849 52.632 0.00 0.00 0.00 4.16
633 644 0.888736 TCATGGCGGTGTCTTTGGTG 60.889 55.000 0.00 0.00 0.00 4.17
634 645 0.889186 GTCATGGCGGTGTCTTTGGT 60.889 55.000 0.00 0.00 0.00 3.67
635 646 1.586154 GGTCATGGCGGTGTCTTTGG 61.586 60.000 0.00 0.00 0.00 3.28
636 647 0.888736 TGGTCATGGCGGTGTCTTTG 60.889 55.000 0.00 0.00 0.00 2.77
637 648 0.179004 TTGGTCATGGCGGTGTCTTT 60.179 50.000 0.00 0.00 0.00 2.52
638 649 0.038166 ATTGGTCATGGCGGTGTCTT 59.962 50.000 0.00 0.00 0.00 3.01
639 650 0.392998 GATTGGTCATGGCGGTGTCT 60.393 55.000 0.00 0.00 0.00 3.41
640 651 0.392998 AGATTGGTCATGGCGGTGTC 60.393 55.000 0.00 0.00 0.00 3.67
641 652 0.677731 CAGATTGGTCATGGCGGTGT 60.678 55.000 0.00 0.00 0.00 4.16
642 653 1.378882 CCAGATTGGTCATGGCGGTG 61.379 60.000 0.00 0.00 31.35 4.94
643 654 1.077501 CCAGATTGGTCATGGCGGT 60.078 57.895 0.00 0.00 31.35 5.68
644 655 3.831883 CCAGATTGGTCATGGCGG 58.168 61.111 0.00 0.00 31.35 6.13
647 658 3.144506 GTCTATGCCAGATTGGTCATGG 58.855 50.000 12.29 10.36 40.46 3.66
648 659 3.144506 GGTCTATGCCAGATTGGTCATG 58.855 50.000 12.29 0.00 40.46 3.07
649 660 2.224378 CGGTCTATGCCAGATTGGTCAT 60.224 50.000 9.05 9.05 40.46 3.06
650 661 1.138859 CGGTCTATGCCAGATTGGTCA 59.861 52.381 0.00 0.00 40.46 4.02
651 662 1.412710 TCGGTCTATGCCAGATTGGTC 59.587 52.381 0.00 0.00 40.46 4.02
652 663 1.414181 CTCGGTCTATGCCAGATTGGT 59.586 52.381 0.00 0.00 40.46 3.67
653 664 1.270518 CCTCGGTCTATGCCAGATTGG 60.271 57.143 0.00 0.00 41.55 3.16
654 665 1.875576 GCCTCGGTCTATGCCAGATTG 60.876 57.143 0.00 0.00 35.17 2.67
655 666 0.394565 GCCTCGGTCTATGCCAGATT 59.605 55.000 0.00 0.00 35.17 2.40
656 667 0.470833 AGCCTCGGTCTATGCCAGAT 60.471 55.000 0.00 0.00 35.17 2.90
657 668 0.687757 AAGCCTCGGTCTATGCCAGA 60.688 55.000 0.00 0.00 0.00 3.86
658 669 0.179000 AAAGCCTCGGTCTATGCCAG 59.821 55.000 0.00 0.00 0.00 4.85
659 670 0.107703 CAAAGCCTCGGTCTATGCCA 60.108 55.000 0.00 0.00 0.00 4.92
660 671 1.440145 GCAAAGCCTCGGTCTATGCC 61.440 60.000 0.00 0.00 0.00 4.40
661 672 1.440145 GGCAAAGCCTCGGTCTATGC 61.440 60.000 0.00 0.00 46.69 3.14
662 673 2.695314 GGCAAAGCCTCGGTCTATG 58.305 57.895 0.00 0.00 46.69 2.23
673 684 1.019805 GTAGTGTCTCCGGGCAAAGC 61.020 60.000 0.00 0.00 0.00 3.51
674 685 0.391263 GGTAGTGTCTCCGGGCAAAG 60.391 60.000 0.00 0.00 0.00 2.77
675 686 1.675219 GGTAGTGTCTCCGGGCAAA 59.325 57.895 0.00 0.00 0.00 3.68
676 687 2.288025 GGGTAGTGTCTCCGGGCAA 61.288 63.158 0.00 0.00 0.00 4.52
677 688 2.682494 GGGTAGTGTCTCCGGGCA 60.682 66.667 0.00 0.00 0.00 5.36
678 689 1.833787 TTTGGGTAGTGTCTCCGGGC 61.834 60.000 0.00 0.00 0.00 6.13
679 690 0.036671 GTTTGGGTAGTGTCTCCGGG 60.037 60.000 0.00 0.00 0.00 5.73
680 691 0.682852 TGTTTGGGTAGTGTCTCCGG 59.317 55.000 0.00 0.00 0.00 5.14
681 692 2.413837 CTTGTTTGGGTAGTGTCTCCG 58.586 52.381 0.00 0.00 0.00 4.63
682 693 2.370849 TCCTTGTTTGGGTAGTGTCTCC 59.629 50.000 0.00 0.00 0.00 3.71
683 694 3.323979 TCTCCTTGTTTGGGTAGTGTCTC 59.676 47.826 0.00 0.00 0.00 3.36
684 695 3.314693 TCTCCTTGTTTGGGTAGTGTCT 58.685 45.455 0.00 0.00 0.00 3.41
685 696 3.764237 TCTCCTTGTTTGGGTAGTGTC 57.236 47.619 0.00 0.00 0.00 3.67
686 697 3.714798 TCTTCTCCTTGTTTGGGTAGTGT 59.285 43.478 0.00 0.00 0.00 3.55
687 698 4.351874 TCTTCTCCTTGTTTGGGTAGTG 57.648 45.455 0.00 0.00 0.00 2.74
688 699 4.807643 GCATCTTCTCCTTGTTTGGGTAGT 60.808 45.833 0.00 0.00 0.00 2.73
689 700 3.691609 GCATCTTCTCCTTGTTTGGGTAG 59.308 47.826 0.00 0.00 0.00 3.18
690 701 3.561313 GGCATCTTCTCCTTGTTTGGGTA 60.561 47.826 0.00 0.00 0.00 3.69
691 702 2.519013 GCATCTTCTCCTTGTTTGGGT 58.481 47.619 0.00 0.00 0.00 4.51
692 703 1.821136 GGCATCTTCTCCTTGTTTGGG 59.179 52.381 0.00 0.00 0.00 4.12
693 704 2.229784 GTGGCATCTTCTCCTTGTTTGG 59.770 50.000 0.00 0.00 0.00 3.28
694 705 2.095567 CGTGGCATCTTCTCCTTGTTTG 60.096 50.000 0.00 0.00 0.00 2.93
695 706 2.154462 CGTGGCATCTTCTCCTTGTTT 58.846 47.619 0.00 0.00 0.00 2.83
696 707 1.813513 CGTGGCATCTTCTCCTTGTT 58.186 50.000 0.00 0.00 0.00 2.83
697 708 0.674895 GCGTGGCATCTTCTCCTTGT 60.675 55.000 0.00 0.00 0.00 3.16
698 709 0.392193 AGCGTGGCATCTTCTCCTTG 60.392 55.000 0.00 0.00 0.00 3.61
699 710 0.392193 CAGCGTGGCATCTTCTCCTT 60.392 55.000 0.00 0.00 0.00 3.36
700 711 1.220206 CAGCGTGGCATCTTCTCCT 59.780 57.895 0.00 0.00 0.00 3.69
701 712 1.078848 ACAGCGTGGCATCTTCTCC 60.079 57.895 0.00 0.00 0.00 3.71
702 713 0.390340 TGACAGCGTGGCATCTTCTC 60.390 55.000 0.00 0.00 24.43 2.87
703 714 0.035317 TTGACAGCGTGGCATCTTCT 59.965 50.000 0.00 0.00 33.90 2.85
704 715 1.089920 ATTGACAGCGTGGCATCTTC 58.910 50.000 0.00 0.00 33.90 2.87
705 716 0.806868 CATTGACAGCGTGGCATCTT 59.193 50.000 0.00 0.00 33.90 2.40
706 717 0.321919 ACATTGACAGCGTGGCATCT 60.322 50.000 0.00 0.00 33.90 2.90
707 718 1.328680 CTACATTGACAGCGTGGCATC 59.671 52.381 0.00 0.00 33.90 3.91
708 719 1.066215 TCTACATTGACAGCGTGGCAT 60.066 47.619 0.00 0.00 33.90 4.40
709 720 0.320050 TCTACATTGACAGCGTGGCA 59.680 50.000 0.00 0.00 30.30 4.92
710 721 1.394917 CTTCTACATTGACAGCGTGGC 59.605 52.381 0.00 0.00 0.00 5.01
711 722 2.413112 CACTTCTACATTGACAGCGTGG 59.587 50.000 0.00 0.00 0.00 4.94
712 723 2.413112 CCACTTCTACATTGACAGCGTG 59.587 50.000 0.00 0.00 0.00 5.34
713 724 2.299013 TCCACTTCTACATTGACAGCGT 59.701 45.455 0.00 0.00 0.00 5.07
714 725 2.959516 TCCACTTCTACATTGACAGCG 58.040 47.619 0.00 0.00 0.00 5.18
715 726 5.886960 AAATCCACTTCTACATTGACAGC 57.113 39.130 0.00 0.00 0.00 4.40
716 727 7.524912 CAGAAAATCCACTTCTACATTGACAG 58.475 38.462 0.00 0.00 31.84 3.51
717 728 6.072508 GCAGAAAATCCACTTCTACATTGACA 60.073 38.462 0.00 0.00 31.84 3.58
718 729 6.072508 TGCAGAAAATCCACTTCTACATTGAC 60.073 38.462 0.00 0.00 31.84 3.18
719 730 6.003326 TGCAGAAAATCCACTTCTACATTGA 58.997 36.000 0.00 0.00 31.84 2.57
720 731 6.258230 TGCAGAAAATCCACTTCTACATTG 57.742 37.500 0.00 0.00 31.84 2.82
721 732 6.660521 TCATGCAGAAAATCCACTTCTACATT 59.339 34.615 0.00 0.00 35.58 2.71
722 733 6.094603 GTCATGCAGAAAATCCACTTCTACAT 59.905 38.462 0.00 0.00 37.37 2.29
723 734 5.412594 GTCATGCAGAAAATCCACTTCTACA 59.587 40.000 0.00 0.00 32.19 2.74
724 735 5.412594 TGTCATGCAGAAAATCCACTTCTAC 59.587 40.000 0.00 0.00 31.84 2.59
725 736 5.559770 TGTCATGCAGAAAATCCACTTCTA 58.440 37.500 0.00 0.00 31.84 2.10
726 737 4.401022 TGTCATGCAGAAAATCCACTTCT 58.599 39.130 0.00 0.00 33.31 2.85
727 738 4.771590 TGTCATGCAGAAAATCCACTTC 57.228 40.909 0.00 0.00 0.00 3.01
739 750 4.219846 GCGCGCTCTGTCATGCAG 62.220 66.667 26.67 9.94 46.34 4.41
767 778 4.176752 GAGGATCACGTGGGCCCC 62.177 72.222 22.27 10.05 33.17 5.80
768 779 3.083997 AGAGGATCACGTGGGCCC 61.084 66.667 17.59 17.59 37.82 5.80
769 780 2.501610 GAGAGGATCACGTGGGCC 59.498 66.667 17.00 16.81 37.82 5.80
770 781 2.501610 GGAGAGGATCACGTGGGC 59.498 66.667 17.00 7.87 37.82 5.36
810 821 1.296715 GGTGAGAGGTTGGCGATGT 59.703 57.895 0.00 0.00 0.00 3.06
826 837 1.134438 GGTTCACCTGGAGGAAGGGT 61.134 60.000 0.00 0.00 42.11 4.34
865 886 2.433838 CAGCAGCTCGGTGGAGTG 60.434 66.667 0.00 0.00 42.53 3.51
909 930 3.591835 GCCCCGTGTGTGGTGTTG 61.592 66.667 0.00 0.00 0.00 3.33
1096 1118 0.327591 AAGTAGTCGAGACGGTCCCT 59.672 55.000 4.14 0.00 36.20 4.20
1104 1126 3.082548 CTGGAACCAGAAGTAGTCGAGA 58.917 50.000 14.94 0.00 46.30 4.04
1107 1129 1.204941 CCCTGGAACCAGAAGTAGTCG 59.795 57.143 20.79 3.02 46.30 4.18
1620 1642 0.390860 CCAGGATGAAGAGCCCGTAG 59.609 60.000 0.00 0.00 39.69 3.51
1899 1921 0.840617 GGATGAGGAAGGGGAGGAAC 59.159 60.000 0.00 0.00 0.00 3.62
2311 2333 4.043200 GCACTGCTTGTTCCCCGC 62.043 66.667 0.00 0.00 0.00 6.13
2312 2334 3.726517 CGCACTGCTTGTTCCCCG 61.727 66.667 0.00 0.00 0.00 5.73
2467 2489 2.002586 TCCTAGACGCACGTACAGTAC 58.997 52.381 0.00 0.00 0.00 2.73
2468 2490 2.385013 TCCTAGACGCACGTACAGTA 57.615 50.000 0.00 0.00 0.00 2.74
2469 2491 1.527034 TTCCTAGACGCACGTACAGT 58.473 50.000 0.00 0.00 0.00 3.55
2470 2492 2.624316 TTTCCTAGACGCACGTACAG 57.376 50.000 0.00 0.00 0.00 2.74
2471 2493 3.581024 AATTTCCTAGACGCACGTACA 57.419 42.857 0.00 0.00 0.00 2.90
2519 2544 1.615883 AGAAGCAGAGCGAGTGAAGAA 59.384 47.619 0.00 0.00 0.00 2.52
2520 2545 1.067985 CAGAAGCAGAGCGAGTGAAGA 60.068 52.381 0.00 0.00 0.00 2.87
2521 2546 1.067985 TCAGAAGCAGAGCGAGTGAAG 60.068 52.381 0.00 0.00 0.00 3.02
2541 2566 4.808414 TTGAGATCGATCAACAGAAGGT 57.192 40.909 26.47 2.88 34.31 3.50
2542 2567 6.047870 AGAATTGAGATCGATCAACAGAAGG 58.952 40.000 26.47 0.00 41.76 3.46
2543 2568 6.755607 TGAGAATTGAGATCGATCAACAGAAG 59.244 38.462 26.47 0.00 41.76 2.85
2544 2569 6.633856 TGAGAATTGAGATCGATCAACAGAA 58.366 36.000 26.47 12.37 41.76 3.02
2545 2570 6.212888 TGAGAATTGAGATCGATCAACAGA 57.787 37.500 26.47 15.39 41.76 3.41
2546 2571 6.534436 ACTTGAGAATTGAGATCGATCAACAG 59.466 38.462 26.47 13.08 41.76 3.16
2547 2572 6.312180 CACTTGAGAATTGAGATCGATCAACA 59.688 38.462 26.47 21.26 41.76 3.33
2548 2573 6.312426 ACACTTGAGAATTGAGATCGATCAAC 59.688 38.462 26.47 19.13 41.76 3.18
2563 2588 3.306571 CCAGCTCATCTGACACTTGAGAA 60.307 47.826 9.56 0.00 45.72 2.87
2638 2669 7.759433 CCTCTGCGATTTTATTTACCAACATTT 59.241 33.333 0.00 0.00 0.00 2.32
2673 2708 6.834451 AGCAGACACTGGTATATAGTACAGTT 59.166 38.462 10.41 5.08 41.85 3.16
2693 2728 0.237498 CACAGTACGTGTCGAGCAGA 59.763 55.000 0.00 0.00 41.03 4.26
2751 2786 5.855925 ACACATGCAAATGTAATGTACGTTG 59.144 36.000 10.68 0.00 37.91 4.10
2760 2795 5.068855 CCCATCCATACACATGCAAATGTAA 59.931 40.000 15.14 2.78 35.05 2.41
2763 2809 3.637694 TCCCATCCATACACATGCAAATG 59.362 43.478 0.00 0.00 0.00 2.32
2782 2828 1.077716 CGTCCCATTCCACCTTCCC 60.078 63.158 0.00 0.00 0.00 3.97
2788 2834 1.078426 CACTCCCGTCCCATTCCAC 60.078 63.158 0.00 0.00 0.00 4.02
2790 2836 2.590092 CCACTCCCGTCCCATTCC 59.410 66.667 0.00 0.00 0.00 3.01
2796 2842 1.072505 TTTCTTGCCACTCCCGTCC 59.927 57.895 0.00 0.00 0.00 4.79
2805 2851 3.353836 GGCTCGCGTTTCTTGCCA 61.354 61.111 5.77 0.00 42.79 4.92
2809 2855 2.737376 GACGGGCTCGCGTTTCTT 60.737 61.111 5.51 0.00 40.63 2.52
2863 2909 2.024319 GTCACTGTCAGCGCCAGTC 61.024 63.158 13.89 2.24 41.10 3.51
2870 2916 2.607892 GCCCGTTGTCACTGTCAGC 61.608 63.158 0.00 0.00 0.00 4.26
2873 2919 2.279918 ACGCCCGTTGTCACTGTC 60.280 61.111 0.00 0.00 0.00 3.51
2899 2945 0.670162 CAGCCACTGTTCCAAACTGG 59.330 55.000 2.49 0.00 39.43 4.00
2904 2950 0.675083 CAATGCAGCCACTGTTCCAA 59.325 50.000 0.00 0.00 33.43 3.53
2914 2960 0.316204 GATGGGTATGCAATGCAGCC 59.684 55.000 14.98 17.39 43.65 4.85
2958 3004 5.800438 TCGCAAATATCGCATATGAGACTAC 59.200 40.000 11.59 0.00 0.00 2.73
2974 3020 3.376540 GCAACCAAACAACTCGCAAATA 58.623 40.909 0.00 0.00 0.00 1.40
2977 3023 0.179124 GGCAACCAAACAACTCGCAA 60.179 50.000 0.00 0.00 0.00 4.85
3022 3068 9.044150 CAACCAAACAATATGTGAAAGTTGATT 57.956 29.630 0.00 0.00 33.43 2.57
3032 3078 2.995258 GCAGGCAACCAAACAATATGTG 59.005 45.455 0.00 0.00 37.17 3.21
3140 3187 4.404073 TCTCCTTCCTTTGCTAGCTCTTAG 59.596 45.833 17.23 7.53 0.00 2.18
3161 3208 3.911661 GCACACTGCATTTCTTCTTCT 57.088 42.857 0.00 0.00 44.26 2.85
3281 3331 2.371841 TCCACTGTGTTTATGTGAGCCT 59.628 45.455 7.08 0.00 33.95 4.58
3287 3338 3.646162 TCCTCTGTCCACTGTGTTTATGT 59.354 43.478 7.08 0.00 0.00 2.29
3289 3340 3.261897 CCTCCTCTGTCCACTGTGTTTAT 59.738 47.826 7.08 0.00 0.00 1.40
3294 3345 0.894141 CTCCTCCTCTGTCCACTGTG 59.106 60.000 0.00 0.00 0.00 3.66
3328 3379 2.773661 ACTGCACTGATGATACCATGGA 59.226 45.455 21.47 2.01 32.09 3.41
3421 3473 9.362539 CGATCATTTCAAATTTCCTTCATCTTT 57.637 29.630 0.00 0.00 0.00 2.52
3429 3481 4.700213 ACGGTCGATCATTTCAAATTTCCT 59.300 37.500 0.00 0.00 0.00 3.36
3430 3482 4.793216 CACGGTCGATCATTTCAAATTTCC 59.207 41.667 0.00 0.00 0.00 3.13
3431 3483 4.262976 GCACGGTCGATCATTTCAAATTTC 59.737 41.667 0.00 0.00 0.00 2.17
3432 3484 4.165779 GCACGGTCGATCATTTCAAATTT 58.834 39.130 0.00 0.00 0.00 1.82
3433 3485 3.758300 GCACGGTCGATCATTTCAAATT 58.242 40.909 0.00 0.00 0.00 1.82
3434 3486 3.405170 GCACGGTCGATCATTTCAAAT 57.595 42.857 0.00 0.00 0.00 2.32
3435 3487 2.892373 GCACGGTCGATCATTTCAAA 57.108 45.000 0.00 0.00 0.00 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.