Multiple sequence alignment - TraesCS6A01G027300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G027300 chr6A 100.000 3124 0 0 1 3124 13733020 13736143 0.000000e+00 5770.0
1 TraesCS6A01G027300 chr6A 100.000 2742 0 0 3527 6268 13736546 13739287 0.000000e+00 5064.0
2 TraesCS6A01G027300 chr6A 76.881 1834 326 56 962 2770 13672404 13674164 0.000000e+00 948.0
3 TraesCS6A01G027300 chr6A 74.884 645 133 16 1016 1655 12926002 12925382 3.730000e-67 267.0
4 TraesCS6A01G027300 chr6A 80.405 148 19 8 1511 1650 12460343 12460488 3.090000e-18 104.0
5 TraesCS6A01G027300 chr6A 97.674 43 1 0 1 43 541070222 541070264 2.420000e-09 75.0
6 TraesCS6A01G027300 chr6A 95.556 45 2 0 1 45 252644315 252644359 8.720000e-09 73.1
7 TraesCS6A01G027300 chr6A 93.878 49 1 2 1 49 408923692 408923646 8.720000e-09 73.1
8 TraesCS6A01G027300 chr6D 94.732 1974 71 15 863 2812 12357978 12359942 0.000000e+00 3038.0
9 TraesCS6A01G027300 chr6D 96.746 1721 46 7 4176 5889 12360968 12362685 0.000000e+00 2859.0
10 TraesCS6A01G027300 chr6D 92.796 583 22 6 3542 4123 12360409 12360972 0.000000e+00 826.0
11 TraesCS6A01G027300 chr6D 77.473 1021 183 26 1071 2087 12316103 12317080 9.120000e-158 568.0
12 TraesCS6A01G027300 chr6D 97.333 300 7 1 5967 6266 12362698 12362996 5.610000e-140 508.0
13 TraesCS6A01G027300 chr6D 76.460 531 78 21 4766 5254 11259596 11260121 1.750000e-60 244.0
14 TraesCS6A01G027300 chr6D 95.946 74 3 0 3047 3120 12359934 12360007 3.070000e-23 121.0
15 TraesCS6A01G027300 chr6D 78.689 183 27 8 1511 1684 11238398 11238577 1.850000e-20 111.0
16 TraesCS6A01G027300 chr6B 94.585 1976 75 9 863 2812 22715410 22717379 0.000000e+00 3027.0
17 TraesCS6A01G027300 chr6B 96.194 1445 50 5 4827 6268 22718745 22720187 0.000000e+00 2359.0
18 TraesCS6A01G027300 chr6B 94.507 892 47 1 3527 4418 22717860 22718749 0.000000e+00 1375.0
19 TraesCS6A01G027300 chr6B 74.686 1114 200 46 1008 2087 22584462 22585527 2.700000e-113 420.0
20 TraesCS6A01G027300 chr6B 76.181 529 79 21 4766 5252 21133789 21134312 1.050000e-57 235.0
21 TraesCS6A01G027300 chr6B 80.519 154 16 10 1511 1654 21124846 21124995 8.590000e-19 106.0
22 TraesCS6A01G027300 chr6B 96.429 56 1 1 159 214 22715222 22715276 2.410000e-14 91.6
23 TraesCS6A01G027300 chr2A 87.788 434 37 9 863 1288 348246556 348246131 1.570000e-135 494.0
24 TraesCS6A01G027300 chr2A 88.235 170 16 2 505 674 31878241 31878406 3.830000e-47 200.0
25 TraesCS6A01G027300 chr2A 93.878 49 2 1 2 49 217731532 217731484 8.720000e-09 73.1
26 TraesCS6A01G027300 chr2A 92.308 52 2 2 1 52 421379239 421379288 8.720000e-09 73.1
27 TraesCS6A01G027300 chr2A 95.238 42 2 0 173 214 345169953 345169912 4.060000e-07 67.6
28 TraesCS6A01G027300 chr2A 92.857 42 3 0 173 214 344899947 344899906 1.890000e-05 62.1
29 TraesCS6A01G027300 chr3B 96.610 236 8 0 2816 3051 771409487 771409252 5.890000e-105 392.0
30 TraesCS6A01G027300 chr3B 96.186 236 9 0 2813 3048 117006799 117007034 2.740000e-103 387.0
31 TraesCS6A01G027300 chr2B 96.610 236 8 0 2816 3051 751836438 751836203 5.890000e-105 392.0
32 TraesCS6A01G027300 chr2B 86.517 178 19 5 498 674 180913705 180913532 2.310000e-44 191.0
33 TraesCS6A01G027300 chr2B 84.656 189 23 3 505 690 594834039 594833854 3.860000e-42 183.0
34 TraesCS6A01G027300 chr2B 95.238 42 2 0 173 214 40911384 40911343 4.060000e-07 67.6
35 TraesCS6A01G027300 chr7B 96.596 235 8 0 2816 3050 746821101 746821335 2.120000e-104 390.0
36 TraesCS6A01G027300 chr7B 85.635 181 21 3 500 679 100414197 100414021 1.070000e-42 185.0
37 TraesCS6A01G027300 chr4B 96.218 238 9 0 2815 3052 656239137 656238900 2.120000e-104 390.0
38 TraesCS6A01G027300 chr3A 96.218 238 9 0 2816 3053 724789967 724789730 2.120000e-104 390.0
39 TraesCS6A01G027300 chr3A 92.308 52 3 1 1 52 262142447 262142397 8.720000e-09 73.1
40 TraesCS6A01G027300 chrUn 95.436 241 11 0 2816 3056 67023006 67022766 9.860000e-103 385.0
41 TraesCS6A01G027300 chr1B 94.737 247 13 0 2808 3054 505767716 505767962 9.860000e-103 385.0
42 TraesCS6A01G027300 chr4A 95.763 236 10 0 2811 3046 621693382 621693617 1.280000e-101 381.0
43 TraesCS6A01G027300 chr4A 84.536 194 26 2 482 674 362068099 362067909 8.300000e-44 189.0
44 TraesCS6A01G027300 chr4A 93.750 48 1 1 1 48 419540870 419540825 3.130000e-08 71.3
45 TraesCS6A01G027300 chr4A 92.157 51 3 1 1 51 515584891 515584940 3.130000e-08 71.3
46 TraesCS6A01G027300 chr5D 87.283 173 19 1 501 673 321901910 321902079 1.780000e-45 195.0
47 TraesCS6A01G027300 chr5D 86.705 173 19 2 501 672 25040149 25039980 8.300000e-44 189.0
48 TraesCS6A01G027300 chr5D 83.590 195 28 2 486 680 274577994 274578184 4.990000e-41 180.0
49 TraesCS6A01G027300 chr2D 86.034 179 21 2 498 675 516708484 516708309 8.300000e-44 189.0
50 TraesCS6A01G027300 chr1A 93.750 48 2 1 1 48 479508066 479508112 3.130000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G027300 chr6A 13733020 13739287 6267 False 5417.00 5770 100.00000 1 6268 2 chr6A.!!$F5 6267
1 TraesCS6A01G027300 chr6A 13672404 13674164 1760 False 948.00 948 76.88100 962 2770 1 chr6A.!!$F2 1808
2 TraesCS6A01G027300 chr6A 12925382 12926002 620 True 267.00 267 74.88400 1016 1655 1 chr6A.!!$R1 639
3 TraesCS6A01G027300 chr6D 12357978 12362996 5018 False 1470.40 3038 95.51060 863 6266 5 chr6D.!!$F4 5403
4 TraesCS6A01G027300 chr6D 12316103 12317080 977 False 568.00 568 77.47300 1071 2087 1 chr6D.!!$F3 1016
5 TraesCS6A01G027300 chr6D 11259596 11260121 525 False 244.00 244 76.46000 4766 5254 1 chr6D.!!$F2 488
6 TraesCS6A01G027300 chr6B 22715222 22720187 4965 False 1713.15 3027 95.42875 159 6268 4 chr6B.!!$F4 6109
7 TraesCS6A01G027300 chr6B 22584462 22585527 1065 False 420.00 420 74.68600 1008 2087 1 chr6B.!!$F3 1079
8 TraesCS6A01G027300 chr6B 21133789 21134312 523 False 235.00 235 76.18100 4766 5252 1 chr6B.!!$F2 486

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
365 366 0.035820 GGCGTCTGTACCCCAATCAA 60.036 55.000 0.00 0.0 0.00 2.57 F
890 925 0.180171 TGGGCCGTAATCCATCACTG 59.820 55.000 0.00 0.0 0.00 3.66 F
1395 1515 1.153168 CCACGGCTGGGTCCTTATG 60.153 63.158 0.00 0.0 33.23 1.90 F
2597 2736 0.954452 GAGTGGTCAAAGGCACCTTG 59.046 55.000 1.91 0.0 36.26 3.61 F
2975 3116 0.035598 TGACCAATTTCGGCGGAAGA 59.964 50.000 6.80 0.0 32.80 2.87 F
3917 4069 0.183492 TGGCTCTTGTTCTGGCAACT 59.817 50.000 0.00 0.0 33.38 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1395 1515 0.034863 TAGGCCAAAACCGGATGACC 60.035 55.000 9.46 6.14 33.69 4.02 R
2597 2736 0.240945 AAGGTGTACGCTTTGCATGC 59.759 50.000 11.82 11.82 0.00 4.06 R
2956 3097 0.035598 TCTTCCGCCGAAATTGGTCA 59.964 50.000 0.00 0.00 0.00 4.02 R
3917 4069 1.074775 GGTGTCCCCATTCAGCACA 59.925 57.895 0.00 0.00 33.12 4.57 R
4597 4749 0.400213 TCCTCTTCACACGGCCAAAT 59.600 50.000 2.24 0.00 0.00 2.32 R
5339 5534 0.249120 TGCCCACTTGGTATGAGTCG 59.751 55.000 0.00 0.00 36.04 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.319052 TGGAGTACAAATAGGGAAAGTTACA 57.681 36.000 0.00 0.00 0.00 2.41
25 26 7.924541 TGGAGTACAAATAGGGAAAGTTACAT 58.075 34.615 0.00 0.00 0.00 2.29
26 27 8.044908 TGGAGTACAAATAGGGAAAGTTACATC 58.955 37.037 0.00 0.00 0.00 3.06
27 28 7.498239 GGAGTACAAATAGGGAAAGTTACATCC 59.502 40.741 0.00 0.00 34.85 3.51
28 29 7.046033 AGTACAAATAGGGAAAGTTACATCCG 58.954 38.462 0.00 0.00 36.54 4.18
29 30 5.190677 ACAAATAGGGAAAGTTACATCCGG 58.809 41.667 0.00 0.00 36.54 5.14
30 31 4.432980 AATAGGGAAAGTTACATCCGGG 57.567 45.455 0.00 0.00 36.54 5.73
31 32 0.916809 AGGGAAAGTTACATCCGGGG 59.083 55.000 0.00 0.00 36.54 5.73
32 33 0.622136 GGGAAAGTTACATCCGGGGT 59.378 55.000 0.00 2.79 36.54 4.95
33 34 1.407851 GGGAAAGTTACATCCGGGGTC 60.408 57.143 0.00 0.00 36.54 4.46
34 35 1.558294 GGAAAGTTACATCCGGGGTCT 59.442 52.381 0.00 0.00 0.00 3.85
35 36 2.026542 GGAAAGTTACATCCGGGGTCTT 60.027 50.000 0.00 0.00 0.00 3.01
36 37 3.198417 GGAAAGTTACATCCGGGGTCTTA 59.802 47.826 0.00 0.00 0.00 2.10
37 38 3.900966 AAGTTACATCCGGGGTCTTAC 57.099 47.619 0.00 0.75 0.00 2.34
38 39 2.823959 AGTTACATCCGGGGTCTTACA 58.176 47.619 0.00 0.00 0.00 2.41
39 40 3.381335 AGTTACATCCGGGGTCTTACAT 58.619 45.455 0.00 0.00 0.00 2.29
40 41 3.778629 AGTTACATCCGGGGTCTTACATT 59.221 43.478 0.00 0.00 0.00 2.71
41 42 4.124970 GTTACATCCGGGGTCTTACATTC 58.875 47.826 0.00 0.00 0.00 2.67
42 43 1.138266 ACATCCGGGGTCTTACATTCG 59.862 52.381 0.00 0.00 0.00 3.34
43 44 0.106149 ATCCGGGGTCTTACATTCGC 59.894 55.000 0.00 0.00 0.00 4.70
44 45 0.974010 TCCGGGGTCTTACATTCGCT 60.974 55.000 0.00 0.00 0.00 4.93
45 46 0.107848 CCGGGGTCTTACATTCGCTT 60.108 55.000 0.00 0.00 0.00 4.68
46 47 1.287425 CGGGGTCTTACATTCGCTTC 58.713 55.000 0.00 0.00 0.00 3.86
47 48 1.664873 GGGGTCTTACATTCGCTTCC 58.335 55.000 0.00 0.00 0.00 3.46
48 49 1.065709 GGGGTCTTACATTCGCTTCCA 60.066 52.381 0.00 0.00 0.00 3.53
49 50 2.617021 GGGGTCTTACATTCGCTTCCAA 60.617 50.000 0.00 0.00 0.00 3.53
50 51 3.078837 GGGTCTTACATTCGCTTCCAAA 58.921 45.455 0.00 0.00 0.00 3.28
51 52 3.127030 GGGTCTTACATTCGCTTCCAAAG 59.873 47.826 0.00 0.00 0.00 2.77
64 65 4.327854 CTTCCAAAGCTCGTCACATAAC 57.672 45.455 0.00 0.00 0.00 1.89
65 66 3.394674 TCCAAAGCTCGTCACATAACA 57.605 42.857 0.00 0.00 0.00 2.41
66 67 3.734463 TCCAAAGCTCGTCACATAACAA 58.266 40.909 0.00 0.00 0.00 2.83
67 68 4.130857 TCCAAAGCTCGTCACATAACAAA 58.869 39.130 0.00 0.00 0.00 2.83
68 69 4.024387 TCCAAAGCTCGTCACATAACAAAC 60.024 41.667 0.00 0.00 0.00 2.93
69 70 4.024048 CCAAAGCTCGTCACATAACAAACT 60.024 41.667 0.00 0.00 0.00 2.66
70 71 5.178623 CCAAAGCTCGTCACATAACAAACTA 59.821 40.000 0.00 0.00 0.00 2.24
71 72 5.840940 AAGCTCGTCACATAACAAACTAC 57.159 39.130 0.00 0.00 0.00 2.73
72 73 4.243270 AGCTCGTCACATAACAAACTACC 58.757 43.478 0.00 0.00 0.00 3.18
73 74 3.991773 GCTCGTCACATAACAAACTACCA 59.008 43.478 0.00 0.00 0.00 3.25
74 75 4.449743 GCTCGTCACATAACAAACTACCAA 59.550 41.667 0.00 0.00 0.00 3.67
75 76 5.614013 GCTCGTCACATAACAAACTACCAAC 60.614 44.000 0.00 0.00 0.00 3.77
76 77 5.358090 TCGTCACATAACAAACTACCAACA 58.642 37.500 0.00 0.00 0.00 3.33
77 78 5.992829 TCGTCACATAACAAACTACCAACAT 59.007 36.000 0.00 0.00 0.00 2.71
78 79 6.483974 TCGTCACATAACAAACTACCAACATT 59.516 34.615 0.00 0.00 0.00 2.71
79 80 6.577055 CGTCACATAACAAACTACCAACATTG 59.423 38.462 0.00 0.00 0.00 2.82
88 89 4.850193 CCAACATTGGCACCCTCT 57.150 55.556 0.00 0.00 42.21 3.69
89 90 3.976704 CCAACATTGGCACCCTCTA 57.023 52.632 0.00 0.00 42.21 2.43
90 91 2.214376 CCAACATTGGCACCCTCTAA 57.786 50.000 0.00 0.00 42.21 2.10
91 92 2.524306 CCAACATTGGCACCCTCTAAA 58.476 47.619 0.00 0.00 42.21 1.85
92 93 2.231235 CCAACATTGGCACCCTCTAAAC 59.769 50.000 0.00 0.00 42.21 2.01
93 94 2.890311 CAACATTGGCACCCTCTAAACA 59.110 45.455 0.00 0.00 0.00 2.83
94 95 3.237268 ACATTGGCACCCTCTAAACAA 57.763 42.857 0.00 0.00 0.00 2.83
95 96 3.571590 ACATTGGCACCCTCTAAACAAA 58.428 40.909 0.00 0.00 0.00 2.83
96 97 3.964031 ACATTGGCACCCTCTAAACAAAA 59.036 39.130 0.00 0.00 0.00 2.44
97 98 4.407296 ACATTGGCACCCTCTAAACAAAAA 59.593 37.500 0.00 0.00 0.00 1.94
125 126 5.540400 CCAACAATGGCCATATTGAGATT 57.460 39.130 30.83 13.41 40.58 2.40
126 127 5.920903 CCAACAATGGCCATATTGAGATTT 58.079 37.500 30.83 13.12 40.58 2.17
127 128 6.350906 CCAACAATGGCCATATTGAGATTTT 58.649 36.000 30.83 12.83 40.58 1.82
128 129 6.824704 CCAACAATGGCCATATTGAGATTTTT 59.175 34.615 30.83 12.27 40.58 1.94
149 150 4.488126 TTTTGTATGAGCTGACACTTGC 57.512 40.909 0.00 0.00 0.00 4.01
150 151 2.837532 TGTATGAGCTGACACTTGCA 57.162 45.000 0.00 0.00 0.00 4.08
151 152 2.416747 TGTATGAGCTGACACTTGCAC 58.583 47.619 0.00 0.00 0.00 4.57
152 153 1.391485 GTATGAGCTGACACTTGCACG 59.609 52.381 0.00 0.00 0.00 5.34
153 154 0.250038 ATGAGCTGACACTTGCACGT 60.250 50.000 0.00 0.00 0.00 4.49
154 155 1.153597 TGAGCTGACACTTGCACGTG 61.154 55.000 20.72 20.72 40.67 4.49
155 156 2.051882 GCTGACACTTGCACGTGC 60.052 61.111 33.11 33.11 38.45 5.34
186 187 6.379133 TGCCCGATTACTAGTTAGAGAGAAAA 59.621 38.462 0.00 0.00 0.00 2.29
266 267 3.994931 TTAGGAAACCCTAGTTGCTCC 57.005 47.619 0.00 0.00 37.58 4.70
267 268 2.046280 AGGAAACCCTAGTTGCTCCT 57.954 50.000 0.00 0.00 38.07 3.69
268 269 3.200958 AGGAAACCCTAGTTGCTCCTA 57.799 47.619 0.00 0.00 40.13 2.94
269 270 2.838813 AGGAAACCCTAGTTGCTCCTAC 59.161 50.000 0.00 0.00 40.13 3.18
282 283 4.077300 TGCTCCTACAAATCAGCATAGG 57.923 45.455 0.00 0.00 36.96 2.57
289 290 5.180868 CCTACAAATCAGCATAGGCATCTTC 59.819 44.000 0.67 0.00 44.61 2.87
291 292 5.933617 ACAAATCAGCATAGGCATCTTCTA 58.066 37.500 0.67 0.00 44.61 2.10
292 293 6.540995 ACAAATCAGCATAGGCATCTTCTAT 58.459 36.000 0.67 0.00 44.61 1.98
293 294 7.002879 ACAAATCAGCATAGGCATCTTCTATT 58.997 34.615 0.67 0.00 44.61 1.73
294 295 7.504911 ACAAATCAGCATAGGCATCTTCTATTT 59.495 33.333 0.67 0.00 44.61 1.40
295 296 8.358148 CAAATCAGCATAGGCATCTTCTATTTT 58.642 33.333 0.67 0.00 44.61 1.82
297 298 6.594744 TCAGCATAGGCATCTTCTATTTTCA 58.405 36.000 0.67 0.00 44.61 2.69
298 299 7.229308 TCAGCATAGGCATCTTCTATTTTCAT 58.771 34.615 0.67 0.00 44.61 2.57
299 300 7.174426 TCAGCATAGGCATCTTCTATTTTCATG 59.826 37.037 0.67 0.00 44.61 3.07
301 302 4.825546 AGGCATCTTCTATTTTCATGCG 57.174 40.909 0.00 0.00 40.70 4.73
302 303 3.004106 AGGCATCTTCTATTTTCATGCGC 59.996 43.478 0.00 0.00 40.70 6.09
323 324 3.200918 AAAAAGGCCAAGACCACGT 57.799 47.368 5.01 0.00 0.00 4.49
324 325 0.744281 AAAAAGGCCAAGACCACGTG 59.256 50.000 9.08 9.08 0.00 4.49
325 326 1.734388 AAAAGGCCAAGACCACGTGC 61.734 55.000 10.91 0.00 0.00 5.34
326 327 4.643387 AGGCCAAGACCACGTGCC 62.643 66.667 10.91 6.34 0.00 5.01
330 331 3.276091 CAAGACCACGTGCCGCAA 61.276 61.111 10.91 0.00 0.00 4.85
331 332 3.276846 AAGACCACGTGCCGCAAC 61.277 61.111 10.91 0.00 0.00 4.17
337 338 4.373116 ACGTGCCGCAACCGAGAT 62.373 61.111 10.07 0.00 36.29 2.75
338 339 3.554692 CGTGCCGCAACCGAGATC 61.555 66.667 0.00 0.00 36.29 2.75
339 340 2.434185 GTGCCGCAACCGAGATCA 60.434 61.111 0.00 0.00 36.29 2.92
340 341 2.125552 TGCCGCAACCGAGATCAG 60.126 61.111 0.00 0.00 36.29 2.90
341 342 2.184322 GCCGCAACCGAGATCAGA 59.816 61.111 0.00 0.00 36.29 3.27
342 343 1.227380 GCCGCAACCGAGATCAGAT 60.227 57.895 0.00 0.00 36.29 2.90
343 344 0.811616 GCCGCAACCGAGATCAGATT 60.812 55.000 0.00 0.00 36.29 2.40
344 345 1.538204 GCCGCAACCGAGATCAGATTA 60.538 52.381 0.00 0.00 36.29 1.75
345 346 2.398498 CCGCAACCGAGATCAGATTAG 58.602 52.381 0.00 0.00 36.29 1.73
346 347 2.398498 CGCAACCGAGATCAGATTAGG 58.602 52.381 0.00 0.00 36.29 2.69
347 348 2.760374 GCAACCGAGATCAGATTAGGG 58.240 52.381 0.00 0.50 0.00 3.53
348 349 2.760374 CAACCGAGATCAGATTAGGGC 58.240 52.381 0.00 0.00 0.00 5.19
349 350 0.962489 ACCGAGATCAGATTAGGGCG 59.038 55.000 0.00 0.00 0.00 6.13
350 351 0.962489 CCGAGATCAGATTAGGGCGT 59.038 55.000 0.00 0.00 0.00 5.68
351 352 1.068194 CCGAGATCAGATTAGGGCGTC 60.068 57.143 0.00 0.00 0.00 5.19
352 353 1.883275 CGAGATCAGATTAGGGCGTCT 59.117 52.381 0.00 0.00 0.00 4.18
353 354 2.351253 CGAGATCAGATTAGGGCGTCTG 60.351 54.545 0.00 0.00 42.46 3.51
354 355 2.625790 GAGATCAGATTAGGGCGTCTGT 59.374 50.000 0.00 0.00 41.92 3.41
355 356 3.821600 GAGATCAGATTAGGGCGTCTGTA 59.178 47.826 0.00 0.00 41.92 2.74
356 357 3.570550 AGATCAGATTAGGGCGTCTGTAC 59.429 47.826 0.00 0.00 41.92 2.90
357 358 2.029623 TCAGATTAGGGCGTCTGTACC 58.970 52.381 2.72 0.00 41.92 3.34
362 363 2.995547 GGGCGTCTGTACCCCAAT 59.004 61.111 0.00 0.00 40.56 3.16
363 364 1.153229 GGGCGTCTGTACCCCAATC 60.153 63.158 0.00 0.00 40.56 2.67
364 365 1.600107 GGCGTCTGTACCCCAATCA 59.400 57.895 0.00 0.00 0.00 2.57
365 366 0.035820 GGCGTCTGTACCCCAATCAA 60.036 55.000 0.00 0.00 0.00 2.57
366 367 1.408266 GGCGTCTGTACCCCAATCAAT 60.408 52.381 0.00 0.00 0.00 2.57
367 368 2.158871 GGCGTCTGTACCCCAATCAATA 60.159 50.000 0.00 0.00 0.00 1.90
368 369 3.131396 GCGTCTGTACCCCAATCAATAG 58.869 50.000 0.00 0.00 0.00 1.73
369 370 3.431766 GCGTCTGTACCCCAATCAATAGT 60.432 47.826 0.00 0.00 0.00 2.12
370 371 4.766375 CGTCTGTACCCCAATCAATAGTT 58.234 43.478 0.00 0.00 0.00 2.24
371 372 4.809426 CGTCTGTACCCCAATCAATAGTTC 59.191 45.833 0.00 0.00 0.00 3.01
372 373 5.123936 GTCTGTACCCCAATCAATAGTTCC 58.876 45.833 0.00 0.00 0.00 3.62
373 374 4.785914 TCTGTACCCCAATCAATAGTTCCA 59.214 41.667 0.00 0.00 0.00 3.53
374 375 5.251932 TCTGTACCCCAATCAATAGTTCCAA 59.748 40.000 0.00 0.00 0.00 3.53
375 376 5.258051 TGTACCCCAATCAATAGTTCCAAC 58.742 41.667 0.00 0.00 0.00 3.77
376 377 3.352648 ACCCCAATCAATAGTTCCAACG 58.647 45.455 0.00 0.00 0.00 4.10
377 378 2.099098 CCCCAATCAATAGTTCCAACGC 59.901 50.000 0.00 0.00 0.00 4.84
378 379 3.016736 CCCAATCAATAGTTCCAACGCT 58.983 45.455 0.00 0.00 0.00 5.07
379 380 3.065371 CCCAATCAATAGTTCCAACGCTC 59.935 47.826 0.00 0.00 0.00 5.03
380 381 3.689161 CCAATCAATAGTTCCAACGCTCA 59.311 43.478 0.00 0.00 0.00 4.26
381 382 4.437390 CCAATCAATAGTTCCAACGCTCAC 60.437 45.833 0.00 0.00 0.00 3.51
382 383 2.695359 TCAATAGTTCCAACGCTCACC 58.305 47.619 0.00 0.00 0.00 4.02
383 384 2.037902 TCAATAGTTCCAACGCTCACCA 59.962 45.455 0.00 0.00 0.00 4.17
384 385 3.009723 CAATAGTTCCAACGCTCACCAT 58.990 45.455 0.00 0.00 0.00 3.55
385 386 2.093306 TAGTTCCAACGCTCACCATG 57.907 50.000 0.00 0.00 0.00 3.66
386 387 0.606401 AGTTCCAACGCTCACCATGG 60.606 55.000 11.19 11.19 0.00 3.66
387 388 1.971167 TTCCAACGCTCACCATGGC 60.971 57.895 13.04 0.00 32.87 4.40
392 393 4.457496 CGCTCACCATGGCGGAGT 62.457 66.667 26.28 1.22 46.42 3.85
393 394 2.512515 GCTCACCATGGCGGAGTC 60.513 66.667 26.28 18.13 38.63 3.36
394 395 2.187946 CTCACCATGGCGGAGTCC 59.812 66.667 20.66 0.00 38.63 3.85
406 407 4.131088 GAGTCCGAGCCCGTCCAC 62.131 72.222 0.00 0.00 0.00 4.02
417 418 4.920112 CGTCCACCGCCAACACCA 62.920 66.667 0.00 0.00 0.00 4.17
418 419 3.284449 GTCCACCGCCAACACCAC 61.284 66.667 0.00 0.00 0.00 4.16
419 420 4.572571 TCCACCGCCAACACCACC 62.573 66.667 0.00 0.00 0.00 4.61
420 421 4.885270 CCACCGCCAACACCACCA 62.885 66.667 0.00 0.00 0.00 4.17
421 422 3.591835 CACCGCCAACACCACCAC 61.592 66.667 0.00 0.00 0.00 4.16
422 423 4.887190 ACCGCCAACACCACCACC 62.887 66.667 0.00 0.00 0.00 4.61
426 427 3.286751 CCAACACCACCACCGCAG 61.287 66.667 0.00 0.00 0.00 5.18
438 439 2.423446 CCGCAGGCACCTAGATCC 59.577 66.667 0.00 0.00 46.14 3.36
439 440 2.423446 CGCAGGCACCTAGATCCC 59.577 66.667 0.00 0.00 0.00 3.85
440 441 2.423446 GCAGGCACCTAGATCCCG 59.577 66.667 0.00 0.00 0.00 5.14
441 442 3.142393 CAGGCACCTAGATCCCGG 58.858 66.667 0.00 0.00 0.00 5.73
442 443 2.122813 AGGCACCTAGATCCCGGG 60.123 66.667 16.85 16.85 0.00 5.73
443 444 3.942439 GGCACCTAGATCCCGGGC 61.942 72.222 18.49 1.77 0.00 6.13
444 445 3.942439 GCACCTAGATCCCGGGCC 61.942 72.222 18.49 10.46 0.00 5.80
445 446 3.242291 CACCTAGATCCCGGGCCC 61.242 72.222 18.49 13.57 0.00 5.80
446 447 3.449126 ACCTAGATCCCGGGCCCT 61.449 66.667 22.43 17.48 0.00 5.19
447 448 2.604991 CCTAGATCCCGGGCCCTC 60.605 72.222 22.43 10.85 0.00 4.30
448 449 2.604991 CTAGATCCCGGGCCCTCC 60.605 72.222 22.43 3.84 0.00 4.30
449 450 3.444417 TAGATCCCGGGCCCTCCA 61.444 66.667 22.43 2.48 34.36 3.86
450 451 3.768833 TAGATCCCGGGCCCTCCAC 62.769 68.421 22.43 7.48 34.36 4.02
477 478 3.803082 CGCAGCCATCACCCAACG 61.803 66.667 0.00 0.00 0.00 4.10
478 479 4.120331 GCAGCCATCACCCAACGC 62.120 66.667 0.00 0.00 0.00 4.84
479 480 2.360350 CAGCCATCACCCAACGCT 60.360 61.111 0.00 0.00 0.00 5.07
480 481 2.360350 AGCCATCACCCAACGCTG 60.360 61.111 0.00 0.00 0.00 5.18
481 482 2.672996 GCCATCACCCAACGCTGT 60.673 61.111 0.00 0.00 0.00 4.40
482 483 2.690778 GCCATCACCCAACGCTGTC 61.691 63.158 0.00 0.00 0.00 3.51
483 484 2.040544 CCATCACCCAACGCTGTCC 61.041 63.158 0.00 0.00 0.00 4.02
484 485 1.302431 CATCACCCAACGCTGTCCA 60.302 57.895 0.00 0.00 0.00 4.02
485 486 0.888736 CATCACCCAACGCTGTCCAA 60.889 55.000 0.00 0.00 0.00 3.53
486 487 0.889186 ATCACCCAACGCTGTCCAAC 60.889 55.000 0.00 0.00 0.00 3.77
487 488 2.590575 ACCCAACGCTGTCCAACG 60.591 61.111 0.00 0.00 0.00 4.10
488 489 4.025401 CCCAACGCTGTCCAACGC 62.025 66.667 0.00 0.00 0.00 4.84
494 495 2.125512 GCTGTCCAACGCGATCCT 60.126 61.111 15.93 0.00 0.00 3.24
495 496 1.141019 GCTGTCCAACGCGATCCTA 59.859 57.895 15.93 0.00 0.00 2.94
496 497 0.872021 GCTGTCCAACGCGATCCTAG 60.872 60.000 15.93 4.85 0.00 3.02
497 498 0.456221 CTGTCCAACGCGATCCTAGT 59.544 55.000 15.93 0.00 0.00 2.57
498 499 0.892755 TGTCCAACGCGATCCTAGTT 59.107 50.000 15.93 0.00 0.00 2.24
499 500 1.274167 TGTCCAACGCGATCCTAGTTT 59.726 47.619 15.93 0.00 0.00 2.66
500 501 2.289195 TGTCCAACGCGATCCTAGTTTT 60.289 45.455 15.93 0.00 0.00 2.43
501 502 2.740447 GTCCAACGCGATCCTAGTTTTT 59.260 45.455 15.93 0.00 0.00 1.94
502 503 3.928375 GTCCAACGCGATCCTAGTTTTTA 59.072 43.478 15.93 0.00 0.00 1.52
503 504 4.569564 GTCCAACGCGATCCTAGTTTTTAT 59.430 41.667 15.93 0.00 0.00 1.40
504 505 5.064325 GTCCAACGCGATCCTAGTTTTTATT 59.936 40.000 15.93 0.00 0.00 1.40
505 506 6.256321 GTCCAACGCGATCCTAGTTTTTATTA 59.744 38.462 15.93 0.00 0.00 0.98
506 507 6.256321 TCCAACGCGATCCTAGTTTTTATTAC 59.744 38.462 15.93 0.00 0.00 1.89
507 508 6.257193 CCAACGCGATCCTAGTTTTTATTACT 59.743 38.462 15.93 0.00 0.00 2.24
508 509 7.201582 CCAACGCGATCCTAGTTTTTATTACTT 60.202 37.037 15.93 0.00 0.00 2.24
509 510 7.460751 ACGCGATCCTAGTTTTTATTACTTC 57.539 36.000 15.93 0.00 0.00 3.01
510 511 6.478016 ACGCGATCCTAGTTTTTATTACTTCC 59.522 38.462 15.93 0.00 0.00 3.46
511 512 6.700520 CGCGATCCTAGTTTTTATTACTTCCT 59.299 38.462 0.00 0.00 0.00 3.36
512 513 7.224167 CGCGATCCTAGTTTTTATTACTTCCTT 59.776 37.037 0.00 0.00 0.00 3.36
513 514 8.549548 GCGATCCTAGTTTTTATTACTTCCTTC 58.450 37.037 0.00 0.00 0.00 3.46
514 515 8.753175 CGATCCTAGTTTTTATTACTTCCTTCG 58.247 37.037 0.00 0.00 0.00 3.79
515 516 7.838771 TCCTAGTTTTTATTACTTCCTTCGC 57.161 36.000 0.00 0.00 0.00 4.70
516 517 7.618137 TCCTAGTTTTTATTACTTCCTTCGCT 58.382 34.615 0.00 0.00 0.00 4.93
517 518 8.098912 TCCTAGTTTTTATTACTTCCTTCGCTT 58.901 33.333 0.00 0.00 0.00 4.68
518 519 8.388853 CCTAGTTTTTATTACTTCCTTCGCTTC 58.611 37.037 0.00 0.00 0.00 3.86
519 520 7.981102 AGTTTTTATTACTTCCTTCGCTTCT 57.019 32.000 0.00 0.00 0.00 2.85
521 522 9.498176 AGTTTTTATTACTTCCTTCGCTTCTAA 57.502 29.630 0.00 0.00 0.00 2.10
528 529 8.873215 TTACTTCCTTCGCTTCTAAATATCTG 57.127 34.615 0.00 0.00 0.00 2.90
529 530 6.879400 ACTTCCTTCGCTTCTAAATATCTGT 58.121 36.000 0.00 0.00 0.00 3.41
530 531 6.981559 ACTTCCTTCGCTTCTAAATATCTGTC 59.018 38.462 0.00 0.00 0.00 3.51
531 532 6.716934 TCCTTCGCTTCTAAATATCTGTCT 57.283 37.500 0.00 0.00 0.00 3.41
532 533 7.113658 TCCTTCGCTTCTAAATATCTGTCTT 57.886 36.000 0.00 0.00 0.00 3.01
533 534 7.556844 TCCTTCGCTTCTAAATATCTGTCTTT 58.443 34.615 0.00 0.00 0.00 2.52
534 535 8.041323 TCCTTCGCTTCTAAATATCTGTCTTTT 58.959 33.333 0.00 0.00 0.00 2.27
535 536 8.669243 CCTTCGCTTCTAAATATCTGTCTTTTT 58.331 33.333 0.00 0.00 0.00 1.94
564 565 7.987649 GGTTTCAAATAAACCACCATATACGA 58.012 34.615 13.43 0.00 46.74 3.43
565 566 8.460428 GGTTTCAAATAAACCACCATATACGAA 58.540 33.333 13.43 0.00 46.74 3.85
568 569 8.740123 TCAAATAAACCACCATATACGAATGT 57.260 30.769 0.00 0.00 0.00 2.71
569 570 9.833917 TCAAATAAACCACCATATACGAATGTA 57.166 29.630 0.00 0.00 34.45 2.29
677 678 4.897025 AGGAACGGAGATAGTAGAAACG 57.103 45.455 0.00 0.00 0.00 3.60
678 679 4.521146 AGGAACGGAGATAGTAGAAACGA 58.479 43.478 0.00 0.00 0.00 3.85
679 680 4.946157 AGGAACGGAGATAGTAGAAACGAA 59.054 41.667 0.00 0.00 0.00 3.85
680 681 5.416952 AGGAACGGAGATAGTAGAAACGAAA 59.583 40.000 0.00 0.00 0.00 3.46
681 682 5.514559 GGAACGGAGATAGTAGAAACGAAAC 59.485 44.000 0.00 0.00 0.00 2.78
682 683 5.893897 ACGGAGATAGTAGAAACGAAACT 57.106 39.130 0.00 0.00 0.00 2.66
683 684 5.638783 ACGGAGATAGTAGAAACGAAACTG 58.361 41.667 0.00 0.00 0.00 3.16
684 685 5.413833 ACGGAGATAGTAGAAACGAAACTGA 59.586 40.000 0.00 0.00 0.00 3.41
685 686 5.738225 CGGAGATAGTAGAAACGAAACTGAC 59.262 44.000 0.00 0.00 0.00 3.51
686 687 6.618811 GGAGATAGTAGAAACGAAACTGACA 58.381 40.000 0.00 0.00 0.00 3.58
687 688 7.259161 GGAGATAGTAGAAACGAAACTGACAT 58.741 38.462 0.00 0.00 0.00 3.06
688 689 7.432838 GGAGATAGTAGAAACGAAACTGACATC 59.567 40.741 0.00 0.00 0.00 3.06
689 690 7.827701 AGATAGTAGAAACGAAACTGACATCA 58.172 34.615 0.00 0.00 0.00 3.07
690 691 8.304596 AGATAGTAGAAACGAAACTGACATCAA 58.695 33.333 0.00 0.00 0.00 2.57
691 692 9.088512 GATAGTAGAAACGAAACTGACATCAAT 57.911 33.333 0.00 0.00 0.00 2.57
692 693 7.730364 AGTAGAAACGAAACTGACATCAATT 57.270 32.000 0.00 0.00 0.00 2.32
693 694 8.154649 AGTAGAAACGAAACTGACATCAATTT 57.845 30.769 0.00 0.00 0.00 1.82
694 695 8.621286 AGTAGAAACGAAACTGACATCAATTTT 58.379 29.630 0.00 0.00 0.00 1.82
695 696 9.233232 GTAGAAACGAAACTGACATCAATTTTT 57.767 29.630 0.00 0.00 0.00 1.94
725 726 8.850007 AAGAGAGACCCTAACATTAGTTTTTC 57.150 34.615 0.00 0.00 39.15 2.29
726 727 8.208575 AGAGAGACCCTAACATTAGTTTTTCT 57.791 34.615 0.00 0.00 39.15 2.52
727 728 8.661345 AGAGAGACCCTAACATTAGTTTTTCTT 58.339 33.333 0.00 0.00 39.15 2.52
728 729 9.286170 GAGAGACCCTAACATTAGTTTTTCTTT 57.714 33.333 0.00 0.00 39.15 2.52
729 730 9.642343 AGAGACCCTAACATTAGTTTTTCTTTT 57.358 29.630 0.00 0.00 39.15 2.27
730 731 9.894783 GAGACCCTAACATTAGTTTTTCTTTTC 57.105 33.333 0.00 0.00 39.15 2.29
731 732 9.416284 AGACCCTAACATTAGTTTTTCTTTTCA 57.584 29.630 0.00 0.00 39.15 2.69
732 733 9.678941 GACCCTAACATTAGTTTTTCTTTTCAG 57.321 33.333 0.00 0.00 39.15 3.02
733 734 8.638873 ACCCTAACATTAGTTTTTCTTTTCAGG 58.361 33.333 0.00 0.00 39.15 3.86
734 735 8.088365 CCCTAACATTAGTTTTTCTTTTCAGGG 58.912 37.037 0.00 0.00 39.15 4.45
735 736 8.856103 CCTAACATTAGTTTTTCTTTTCAGGGA 58.144 33.333 0.00 0.00 39.15 4.20
740 741 9.639601 CATTAGTTTTTCTTTTCAGGGATAACC 57.360 33.333 0.00 0.00 40.67 2.85
741 742 6.327279 AGTTTTTCTTTTCAGGGATAACCG 57.673 37.500 0.00 0.00 46.96 4.44
742 743 5.831525 AGTTTTTCTTTTCAGGGATAACCGT 59.168 36.000 0.00 0.00 46.96 4.83
743 744 5.952526 TTTTCTTTTCAGGGATAACCGTC 57.047 39.130 0.00 0.00 46.96 4.79
744 745 3.622166 TCTTTTCAGGGATAACCGTCC 57.378 47.619 0.00 0.00 46.96 4.79
803 804 9.569122 TGAAGGTAAGCTAATTATATTGTTCCC 57.431 33.333 0.00 0.00 0.00 3.97
804 805 9.569122 GAAGGTAAGCTAATTATATTGTTCCCA 57.431 33.333 0.00 0.00 0.00 4.37
806 807 9.520515 AGGTAAGCTAATTATATTGTTCCCATG 57.479 33.333 0.00 0.00 0.00 3.66
807 808 9.515226 GGTAAGCTAATTATATTGTTCCCATGA 57.485 33.333 0.00 0.00 0.00 3.07
811 812 9.812347 AGCTAATTATATTGTTCCCATGAATCA 57.188 29.630 0.00 0.00 31.98 2.57
815 816 5.779529 ATATTGTTCCCATGAATCAGCAC 57.220 39.130 0.00 0.00 31.98 4.40
822 823 1.067060 CCATGAATCAGCACAGGCATG 59.933 52.381 0.00 0.00 44.61 4.06
886 921 1.757682 TTGTTGGGCCGTAATCCATC 58.242 50.000 0.00 0.00 32.48 3.51
887 922 0.621082 TGTTGGGCCGTAATCCATCA 59.379 50.000 0.00 0.00 32.48 3.07
888 923 1.021968 GTTGGGCCGTAATCCATCAC 58.978 55.000 0.00 0.00 32.48 3.06
890 925 0.180171 TGGGCCGTAATCCATCACTG 59.820 55.000 0.00 0.00 0.00 3.66
907 947 5.384063 TCACTGAGCTTTTCTAGTGAGAG 57.616 43.478 11.91 0.00 43.14 3.20
1283 1388 1.884075 TTCACACCCATCCTCGACCG 61.884 60.000 0.00 0.00 0.00 4.79
1395 1515 1.153168 CCACGGCTGGGTCCTTATG 60.153 63.158 0.00 0.00 33.23 1.90
1417 1537 1.283613 TCATCCGGTTTTGGCCTATGT 59.716 47.619 3.32 0.00 0.00 2.29
1505 1628 2.811317 GCACGACTTCAGCGGAGG 60.811 66.667 0.00 0.00 0.00 4.30
1524 1647 2.510238 GTGCTCTGCGCTGTAGGG 60.510 66.667 9.73 0.00 40.11 3.53
1558 1681 4.314440 TGCACGGAGACTGCCACC 62.314 66.667 0.00 0.00 34.77 4.61
1560 1683 3.625897 CACGGAGACTGCCACCCA 61.626 66.667 0.00 0.00 0.00 4.51
1968 2091 4.120331 GTTGCCTCATGGGTGCGC 62.120 66.667 0.00 0.00 37.43 6.09
2040 2163 2.894765 GACAGGGAAGGGAGCTATAGTC 59.105 54.545 0.84 0.00 0.00 2.59
2122 2245 3.318839 TGCCTTCATTGTTCAACTTGAGG 59.681 43.478 0.00 0.00 0.00 3.86
2182 2305 1.204941 AGTCCTACCATCTGTTCGCAC 59.795 52.381 0.00 0.00 0.00 5.34
2224 2347 7.765695 AATTGCTTACCATTACATCATAGGG 57.234 36.000 0.00 0.00 0.00 3.53
2597 2736 0.954452 GAGTGGTCAAAGGCACCTTG 59.046 55.000 1.91 0.00 36.26 3.61
2686 2827 3.242608 GCACACTTTTCGTTGTAGCAGAA 60.243 43.478 0.00 0.00 0.00 3.02
2687 2828 4.554723 GCACACTTTTCGTTGTAGCAGAAT 60.555 41.667 0.00 0.00 0.00 2.40
2697 2838 8.803201 TTCGTTGTAGCAGAATATTCTCTATG 57.197 34.615 15.24 6.54 34.74 2.23
2812 2953 3.868077 GGCTAAGTTGCTGACATCTACAG 59.132 47.826 0.00 0.00 38.27 2.74
2813 2954 4.382040 GGCTAAGTTGCTGACATCTACAGA 60.382 45.833 0.00 0.00 37.54 3.41
2814 2955 5.355596 GCTAAGTTGCTGACATCTACAGAT 58.644 41.667 0.00 0.00 37.54 2.90
2815 2956 5.461737 GCTAAGTTGCTGACATCTACAGATC 59.538 44.000 0.00 0.00 37.54 2.75
2816 2957 5.411831 AAGTTGCTGACATCTACAGATCA 57.588 39.130 0.00 0.00 37.54 2.92
2817 2958 5.008619 AGTTGCTGACATCTACAGATCAG 57.991 43.478 0.00 5.76 37.54 2.90
2818 2959 3.449528 TGCTGACATCTACAGATCAGC 57.550 47.619 20.52 20.52 45.26 4.26
2819 2960 2.223665 TGCTGACATCTACAGATCAGCG 60.224 50.000 21.29 2.76 46.67 5.18
2820 2961 2.223688 GCTGACATCTACAGATCAGCGT 60.224 50.000 15.44 0.65 40.29 5.07
2821 2962 3.736433 GCTGACATCTACAGATCAGCGTT 60.736 47.826 15.44 0.00 40.29 4.84
2822 2963 4.428209 CTGACATCTACAGATCAGCGTTT 58.572 43.478 0.00 0.00 37.54 3.60
2823 2964 4.820897 TGACATCTACAGATCAGCGTTTT 58.179 39.130 0.00 0.00 31.21 2.43
2824 2965 4.627035 TGACATCTACAGATCAGCGTTTTG 59.373 41.667 0.00 0.00 31.21 2.44
2825 2966 4.820897 ACATCTACAGATCAGCGTTTTGA 58.179 39.130 0.00 0.00 31.21 2.69
2826 2967 5.423015 ACATCTACAGATCAGCGTTTTGAT 58.577 37.500 0.00 0.00 40.40 2.57
2827 2968 5.877012 ACATCTACAGATCAGCGTTTTGATT 59.123 36.000 0.00 0.00 37.90 2.57
2828 2969 6.372659 ACATCTACAGATCAGCGTTTTGATTT 59.627 34.615 0.00 0.00 37.90 2.17
2829 2970 6.801539 TCTACAGATCAGCGTTTTGATTTT 57.198 33.333 0.00 0.00 37.90 1.82
2830 2971 6.831769 TCTACAGATCAGCGTTTTGATTTTC 58.168 36.000 0.00 0.00 37.90 2.29
2831 2972 4.466828 ACAGATCAGCGTTTTGATTTTCG 58.533 39.130 0.00 0.00 37.90 3.46
2832 2973 3.848019 CAGATCAGCGTTTTGATTTTCGG 59.152 43.478 0.00 0.00 37.90 4.30
2833 2974 3.502211 AGATCAGCGTTTTGATTTTCGGT 59.498 39.130 0.00 0.00 37.90 4.69
2834 2975 3.701532 TCAGCGTTTTGATTTTCGGTT 57.298 38.095 0.00 0.00 31.89 4.44
2835 2976 4.035278 TCAGCGTTTTGATTTTCGGTTT 57.965 36.364 0.00 0.00 31.89 3.27
2836 2977 3.794028 TCAGCGTTTTGATTTTCGGTTTG 59.206 39.130 0.00 0.00 31.89 2.93
2837 2978 3.549873 CAGCGTTTTGATTTTCGGTTTGT 59.450 39.130 0.00 0.00 31.89 2.83
2838 2979 3.549873 AGCGTTTTGATTTTCGGTTTGTG 59.450 39.130 0.00 0.00 0.00 3.33
2839 2980 3.548268 GCGTTTTGATTTTCGGTTTGTGA 59.452 39.130 0.00 0.00 0.00 3.58
2840 2981 4.208253 GCGTTTTGATTTTCGGTTTGTGAT 59.792 37.500 0.00 0.00 0.00 3.06
2841 2982 5.276631 GCGTTTTGATTTTCGGTTTGTGATT 60.277 36.000 0.00 0.00 0.00 2.57
2842 2983 6.700978 CGTTTTGATTTTCGGTTTGTGATTT 58.299 32.000 0.00 0.00 0.00 2.17
2843 2984 7.176741 CGTTTTGATTTTCGGTTTGTGATTTT 58.823 30.769 0.00 0.00 0.00 1.82
2844 2985 7.690224 CGTTTTGATTTTCGGTTTGTGATTTTT 59.310 29.630 0.00 0.00 0.00 1.94
2845 2986 8.994881 GTTTTGATTTTCGGTTTGTGATTTTTC 58.005 29.630 0.00 0.00 0.00 2.29
2846 2987 8.485976 TTTGATTTTCGGTTTGTGATTTTTCT 57.514 26.923 0.00 0.00 0.00 2.52
2847 2988 7.692908 TGATTTTCGGTTTGTGATTTTTCTC 57.307 32.000 0.00 0.00 0.00 2.87
2848 2989 6.416455 TGATTTTCGGTTTGTGATTTTTCTCG 59.584 34.615 0.00 0.00 0.00 4.04
2849 2990 3.262135 TCGGTTTGTGATTTTTCTCGC 57.738 42.857 0.00 0.00 0.00 5.03
2850 2991 2.031508 TCGGTTTGTGATTTTTCTCGCC 60.032 45.455 0.00 0.00 0.00 5.54
2851 2992 2.672714 GGTTTGTGATTTTTCTCGCCC 58.327 47.619 0.00 0.00 0.00 6.13
2852 2993 2.296190 GGTTTGTGATTTTTCTCGCCCT 59.704 45.455 0.00 0.00 0.00 5.19
2853 2994 3.504520 GGTTTGTGATTTTTCTCGCCCTA 59.495 43.478 0.00 0.00 0.00 3.53
2854 2995 4.379499 GGTTTGTGATTTTTCTCGCCCTAG 60.379 45.833 0.00 0.00 0.00 3.02
2855 2996 2.985896 TGTGATTTTTCTCGCCCTAGG 58.014 47.619 0.06 0.06 0.00 3.02
2856 2997 1.671328 GTGATTTTTCTCGCCCTAGGC 59.329 52.381 2.05 0.00 46.75 3.93
2874 3015 1.934463 CCGAGATGGCCGAATTTCG 59.066 57.895 11.81 11.81 40.07 3.46
2891 3032 8.959761 CGAATTTCGGTCGTTTTTAAAAATTT 57.040 26.923 16.02 0.00 36.00 1.82
2892 3033 9.073266 CGAATTTCGGTCGTTTTTAAAAATTTC 57.927 29.630 16.02 9.25 36.00 2.17
2893 3034 8.959761 AATTTCGGTCGTTTTTAAAAATTTCG 57.040 26.923 16.02 14.40 0.00 3.46
2894 3035 6.493697 TTCGGTCGTTTTTAAAAATTTCGG 57.506 33.333 16.02 12.42 0.00 4.30
2895 3036 4.440431 TCGGTCGTTTTTAAAAATTTCGGC 59.560 37.500 16.02 15.29 0.00 5.54
2896 3037 4.375205 CGGTCGTTTTTAAAAATTTCGGCC 60.375 41.667 24.70 24.70 36.74 6.13
2897 3038 4.746115 GGTCGTTTTTAAAAATTTCGGCCT 59.254 37.500 26.13 0.00 36.98 5.19
2898 3039 5.919707 GGTCGTTTTTAAAAATTTCGGCCTA 59.080 36.000 26.13 7.47 36.98 3.93
2899 3040 6.420306 GGTCGTTTTTAAAAATTTCGGCCTAA 59.580 34.615 26.13 0.00 36.98 2.69
2900 3041 7.042858 GGTCGTTTTTAAAAATTTCGGCCTAAA 60.043 33.333 26.13 4.72 36.98 1.85
2901 3042 8.489559 GTCGTTTTTAAAAATTTCGGCCTAAAT 58.510 29.630 16.02 9.37 0.00 1.40
2902 3043 9.043079 TCGTTTTTAAAAATTTCGGCCTAAATT 57.957 25.926 19.45 19.45 40.02 1.82
2903 3044 9.653067 CGTTTTTAAAAATTTCGGCCTAAATTT 57.347 25.926 26.75 26.75 46.09 1.82
2907 3048 6.795098 AAAAATTTCGGCCTAAATTTGACC 57.205 33.333 30.60 0.00 44.35 4.02
2908 3049 5.476091 AAATTTCGGCCTAAATTTGACCA 57.524 34.783 29.82 0.00 43.78 4.02
2909 3050 5.476091 AATTTCGGCCTAAATTTGACCAA 57.524 34.783 19.45 0.00 35.96 3.67
2910 3051 5.675684 ATTTCGGCCTAAATTTGACCAAT 57.324 34.783 9.37 0.00 0.00 3.16
2911 3052 5.476091 TTTCGGCCTAAATTTGACCAATT 57.524 34.783 0.00 0.00 36.57 2.32
2912 3053 5.476091 TTCGGCCTAAATTTGACCAATTT 57.524 34.783 0.00 3.08 45.45 1.82
2913 3054 5.476091 TCGGCCTAAATTTGACCAATTTT 57.524 34.783 0.00 5.60 41.57 1.82
2914 3055 5.859495 TCGGCCTAAATTTGACCAATTTTT 58.141 33.333 0.00 3.43 41.57 1.94
2915 3056 5.698545 TCGGCCTAAATTTGACCAATTTTTG 59.301 36.000 0.00 6.37 41.57 2.44
2916 3057 5.698545 CGGCCTAAATTTGACCAATTTTTGA 59.301 36.000 0.00 0.00 41.57 2.69
2917 3058 6.347321 CGGCCTAAATTTGACCAATTTTTGAC 60.347 38.462 0.00 0.00 41.57 3.18
2918 3059 6.710295 GGCCTAAATTTGACCAATTTTTGACT 59.290 34.615 0.00 0.00 41.57 3.41
2919 3060 7.307930 GGCCTAAATTTGACCAATTTTTGACTG 60.308 37.037 0.00 0.00 41.57 3.51
2920 3061 7.440856 GCCTAAATTTGACCAATTTTTGACTGA 59.559 33.333 0.00 0.00 41.57 3.41
2921 3062 9.323985 CCTAAATTTGACCAATTTTTGACTGAA 57.676 29.630 0.00 0.00 41.57 3.02
2927 3068 8.783833 TTGACCAATTTTTGACTGAAATTTGA 57.216 26.923 0.00 0.00 35.21 2.69
2928 3069 8.961294 TGACCAATTTTTGACTGAAATTTGAT 57.039 26.923 0.00 0.00 35.21 2.57
2929 3070 9.393512 TGACCAATTTTTGACTGAAATTTGATT 57.606 25.926 0.00 0.00 35.21 2.57
2968 3109 7.656707 ATTTCTCAAATTTGACCAATTTCGG 57.343 32.000 16.91 4.55 42.28 4.30
2969 3110 4.555262 TCTCAAATTTGACCAATTTCGGC 58.445 39.130 16.91 0.00 42.28 5.54
2970 3111 3.312828 TCAAATTTGACCAATTTCGGCG 58.687 40.909 16.91 0.00 42.28 6.46
2971 3112 2.362169 AATTTGACCAATTTCGGCGG 57.638 45.000 7.21 0.00 30.09 6.13
2972 3113 1.540267 ATTTGACCAATTTCGGCGGA 58.460 45.000 7.21 0.00 0.00 5.54
2973 3114 1.319541 TTTGACCAATTTCGGCGGAA 58.680 45.000 1.65 1.65 0.00 4.30
2974 3115 0.878416 TTGACCAATTTCGGCGGAAG 59.122 50.000 6.80 0.00 32.80 3.46
2975 3116 0.035598 TGACCAATTTCGGCGGAAGA 59.964 50.000 6.80 0.00 32.80 2.87
2976 3117 1.339631 TGACCAATTTCGGCGGAAGAT 60.340 47.619 6.80 0.00 32.80 2.40
2977 3118 2.093394 TGACCAATTTCGGCGGAAGATA 60.093 45.455 6.80 0.00 32.80 1.98
2978 3119 2.544267 GACCAATTTCGGCGGAAGATAG 59.456 50.000 6.80 0.00 32.80 2.08
2979 3120 2.169769 ACCAATTTCGGCGGAAGATAGA 59.830 45.455 6.80 0.00 32.80 1.98
2980 3121 3.181454 ACCAATTTCGGCGGAAGATAGAT 60.181 43.478 6.80 0.00 32.80 1.98
2981 3122 3.815401 CCAATTTCGGCGGAAGATAGATT 59.185 43.478 6.80 1.49 32.80 2.40
2982 3123 4.275936 CCAATTTCGGCGGAAGATAGATTT 59.724 41.667 6.80 0.00 32.80 2.17
2983 3124 5.444122 CAATTTCGGCGGAAGATAGATTTC 58.556 41.667 6.80 0.00 32.80 2.17
2984 3125 2.417339 TCGGCGGAAGATAGATTTCG 57.583 50.000 7.21 0.00 0.00 3.46
2985 3126 0.784778 CGGCGGAAGATAGATTTCGC 59.215 55.000 0.00 3.57 0.00 4.70
2986 3127 1.149148 GGCGGAAGATAGATTTCGCC 58.851 55.000 14.76 14.76 37.21 5.54
2987 3128 1.149148 GCGGAAGATAGATTTCGCCC 58.851 55.000 0.68 0.00 0.00 6.13
2988 3129 1.270358 GCGGAAGATAGATTTCGCCCT 60.270 52.381 0.68 0.00 0.00 5.19
2989 3130 2.029290 GCGGAAGATAGATTTCGCCCTA 60.029 50.000 0.68 0.00 0.00 3.53
2990 3131 3.839293 CGGAAGATAGATTTCGCCCTAG 58.161 50.000 0.00 0.00 0.00 3.02
2991 3132 3.367498 CGGAAGATAGATTTCGCCCTAGG 60.367 52.174 0.06 0.06 0.00 3.02
2992 3133 3.591023 GAAGATAGATTTCGCCCTAGGC 58.409 50.000 2.05 0.00 46.75 3.93
3010 3151 3.924238 CCAAGATGGCCGAAATTCG 57.076 52.632 8.62 8.62 40.07 3.34
3020 3161 3.526825 CGAAATTCGGCCGAAATCC 57.473 52.632 41.31 29.08 37.69 3.01
3022 3163 0.730840 GAAATTCGGCCGAAATCCGT 59.269 50.000 41.31 24.03 46.49 4.69
3023 3164 1.131693 GAAATTCGGCCGAAATCCGTT 59.868 47.619 41.31 28.12 46.49 4.44
3024 3165 1.170442 AATTCGGCCGAAATCCGTTT 58.830 45.000 41.31 27.41 46.49 3.60
3025 3166 1.170442 ATTCGGCCGAAATCCGTTTT 58.830 45.000 41.31 21.74 46.49 2.43
3026 3167 0.953003 TTCGGCCGAAATCCGTTTTT 59.047 45.000 37.13 0.00 46.49 1.94
3045 3186 4.780546 TTTTTCGGCCGAAATTGAAAAC 57.219 36.364 43.99 0.00 42.71 2.43
3046 3187 3.438297 TTTCGGCCGAAATTGAAAACA 57.562 38.095 41.63 22.24 38.95 2.83
3047 3188 2.409152 TCGGCCGAAATTGAAAACAC 57.591 45.000 28.99 0.00 0.00 3.32
3048 3189 1.676529 TCGGCCGAAATTGAAAACACA 59.323 42.857 28.99 0.00 0.00 3.72
3049 3190 2.050691 CGGCCGAAATTGAAAACACAG 58.949 47.619 24.07 0.00 0.00 3.66
3050 3191 1.792367 GGCCGAAATTGAAAACACAGC 59.208 47.619 0.00 0.00 0.00 4.40
3051 3192 2.545742 GGCCGAAATTGAAAACACAGCT 60.546 45.455 0.00 0.00 0.00 4.24
3052 3193 3.305064 GGCCGAAATTGAAAACACAGCTA 60.305 43.478 0.00 0.00 0.00 3.32
3053 3194 3.668656 GCCGAAATTGAAAACACAGCTAC 59.331 43.478 0.00 0.00 0.00 3.58
3054 3195 4.791411 GCCGAAATTGAAAACACAGCTACA 60.791 41.667 0.00 0.00 0.00 2.74
3055 3196 4.911610 CCGAAATTGAAAACACAGCTACAG 59.088 41.667 0.00 0.00 0.00 2.74
3088 3229 7.721402 ACAAATATGTCAAACAAACCTTAGCA 58.279 30.769 0.00 0.00 33.41 3.49
3120 3261 3.530535 TCGTGCTGCTGATAAATGCTTA 58.469 40.909 0.00 0.00 0.00 3.09
3121 3262 4.129380 TCGTGCTGCTGATAAATGCTTAT 58.871 39.130 0.00 0.00 0.00 1.73
3122 3263 4.212004 TCGTGCTGCTGATAAATGCTTATC 59.788 41.667 0.00 0.00 42.61 1.75
3123 3264 4.612259 CGTGCTGCTGATAAATGCTTATCC 60.612 45.833 0.00 0.00 41.91 2.59
3704 3856 4.672542 CGATCACACATGACCATTTTGACC 60.673 45.833 0.00 0.00 37.79 4.02
3799 3951 1.486211 GCTACCTTCCTAGCCTGACA 58.514 55.000 0.00 0.00 34.16 3.58
3804 3956 2.324541 CCTTCCTAGCCTGACATAGCT 58.675 52.381 5.54 5.54 43.20 3.32
3824 3976 3.013932 CCTCCAGCTTCCCTGCCT 61.014 66.667 0.00 0.00 40.36 4.75
3831 3983 2.423947 CCAGCTTCCCTGCCTATGAATT 60.424 50.000 0.00 0.00 40.36 2.17
3871 4023 4.779486 ACATCCCCACCCCTCCCC 62.779 72.222 0.00 0.00 0.00 4.81
3917 4069 0.183492 TGGCTCTTGTTCTGGCAACT 59.817 50.000 0.00 0.00 33.38 3.16
3991 4143 1.149174 GGCGATCCCATGTCACCAT 59.851 57.895 0.00 0.00 0.00 3.55
4000 4152 3.329225 TCCCATGTCACCATAGTTGTTCA 59.671 43.478 0.00 0.00 0.00 3.18
4044 4196 2.896801 CTTGTTCAAGCGCGCCACT 61.897 57.895 30.33 10.24 0.00 4.00
4069 4221 1.299976 GGGATCCTTTGTCAGCCGT 59.700 57.895 12.58 0.00 0.00 5.68
4070 4222 0.322546 GGGATCCTTTGTCAGCCGTT 60.323 55.000 12.58 0.00 0.00 4.44
4106 4258 1.379977 TTCCCATCTCGCTCTCCGT 60.380 57.895 0.00 0.00 38.35 4.69
4150 4302 2.032071 CCCAGCCCGACGACTTTT 59.968 61.111 0.00 0.00 0.00 2.27
4156 4308 1.615107 GCCCGACGACTTTTCTCACG 61.615 60.000 0.00 0.00 0.00 4.35
4159 4311 0.937699 CGACGACTTTTCTCACGCCA 60.938 55.000 0.00 0.00 0.00 5.69
4293 4445 2.228822 GTGATTGCATTTTGACCGTCCT 59.771 45.455 0.00 0.00 0.00 3.85
4439 4591 7.129972 TCCCTACCTGTAACTTATCTCTTAGGA 59.870 40.741 0.00 0.00 0.00 2.94
4451 4603 4.669866 TCTCTTAGGAGGACTGTAACCA 57.330 45.455 1.52 0.00 39.86 3.67
4463 4615 4.448060 GGACTGTAACCAAAAACTCTCTCG 59.552 45.833 0.00 0.00 0.00 4.04
4479 4631 6.892691 ACTCTCTCGTTTCAATGAAATGAAC 58.107 36.000 25.14 8.42 43.84 3.18
4507 4659 3.877508 AGGTCCTTCGTGTTTTCTCAAAG 59.122 43.478 0.00 0.00 0.00 2.77
4508 4660 3.875134 GGTCCTTCGTGTTTTCTCAAAGA 59.125 43.478 0.00 0.00 0.00 2.52
4605 4757 5.636965 TGTTATTTCAATTGTCATTTGGCCG 59.363 36.000 5.13 0.00 0.00 6.13
4704 4859 7.339721 AGAAGAATCTGATCATTCTGTTGCAAT 59.660 33.333 11.43 0.00 41.45 3.56
4708 4863 7.876936 ATCTGATCATTCTGTTGCAATAGTT 57.123 32.000 20.91 8.91 0.00 2.24
4717 4872 3.417101 TGTTGCAATAGTTACCCACCAG 58.583 45.455 0.59 0.00 0.00 4.00
4895 5057 5.122239 CAGCTTCCAAATGTTCGATAACTCA 59.878 40.000 0.00 0.00 36.51 3.41
5391 5588 2.620585 GCTGTGAGAGAAAAAGCCTTGT 59.379 45.455 0.00 0.00 0.00 3.16
5468 5665 9.046296 GTTCTTCCATACAATACCTTATCACTG 57.954 37.037 0.00 0.00 0.00 3.66
5482 5679 7.394016 ACCTTATCACTGATGTCACAACAATA 58.606 34.615 1.42 0.00 39.30 1.90
5628 5825 2.206576 AGACAAGTTGATTCCTGGGC 57.793 50.000 10.54 0.00 0.00 5.36
5667 5864 0.391597 TTCTGAACCCGTGTGTCTCC 59.608 55.000 0.00 0.00 0.00 3.71
5727 5924 2.684881 AGTTGACAACTGAAGGTGCAAG 59.315 45.455 19.96 0.00 41.01 4.01
5922 6119 3.847184 TCCAATCCCACCACATGTAGTAA 59.153 43.478 0.00 0.00 0.00 2.24
6001 6198 3.007182 CAGAGATTGGCAATTGTGGGTTT 59.993 43.478 14.93 0.00 0.00 3.27
6084 6281 3.822940 TGGACTTTGGTAATTTGGTCGT 58.177 40.909 0.00 0.00 0.00 4.34
6159 6356 3.404899 GTCATGTTTTGGGGTTCGACTA 58.595 45.455 0.00 0.00 0.00 2.59
6193 6390 5.244626 CACATCCCTTTCTCCTTTTCACAAT 59.755 40.000 0.00 0.00 0.00 2.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.319052 TGTAACTTTCCCTATTTGTACTCCA 57.681 36.000 0.00 0.00 0.00 3.86
1 2 7.498239 GGATGTAACTTTCCCTATTTGTACTCC 59.502 40.741 0.00 0.00 0.00 3.85
2 3 7.224167 CGGATGTAACTTTCCCTATTTGTACTC 59.776 40.741 0.00 0.00 0.00 2.59
3 4 7.046033 CGGATGTAACTTTCCCTATTTGTACT 58.954 38.462 0.00 0.00 0.00 2.73
4 5 6.259387 CCGGATGTAACTTTCCCTATTTGTAC 59.741 42.308 0.00 0.00 0.00 2.90
5 6 6.350906 CCGGATGTAACTTTCCCTATTTGTA 58.649 40.000 0.00 0.00 0.00 2.41
6 7 5.190677 CCGGATGTAACTTTCCCTATTTGT 58.809 41.667 0.00 0.00 0.00 2.83
7 8 4.578928 CCCGGATGTAACTTTCCCTATTTG 59.421 45.833 0.73 0.00 0.00 2.32
8 9 4.385977 CCCCGGATGTAACTTTCCCTATTT 60.386 45.833 0.73 0.00 0.00 1.40
9 10 3.137728 CCCCGGATGTAACTTTCCCTATT 59.862 47.826 0.73 0.00 0.00 1.73
10 11 2.709397 CCCCGGATGTAACTTTCCCTAT 59.291 50.000 0.73 0.00 0.00 2.57
11 12 2.121129 CCCCGGATGTAACTTTCCCTA 58.879 52.381 0.73 0.00 0.00 3.53
12 13 0.916809 CCCCGGATGTAACTTTCCCT 59.083 55.000 0.73 0.00 0.00 4.20
13 14 0.622136 ACCCCGGATGTAACTTTCCC 59.378 55.000 0.73 0.00 0.00 3.97
14 15 1.558294 AGACCCCGGATGTAACTTTCC 59.442 52.381 0.73 0.00 0.00 3.13
15 16 3.345508 AAGACCCCGGATGTAACTTTC 57.654 47.619 0.73 0.00 0.00 2.62
16 17 3.583966 TGTAAGACCCCGGATGTAACTTT 59.416 43.478 0.73 0.00 0.00 2.66
17 18 3.175594 TGTAAGACCCCGGATGTAACTT 58.824 45.455 0.73 3.27 0.00 2.66
18 19 2.823959 TGTAAGACCCCGGATGTAACT 58.176 47.619 0.73 0.00 0.00 2.24
19 20 3.832615 ATGTAAGACCCCGGATGTAAC 57.167 47.619 0.73 0.17 0.00 2.50
20 21 3.181473 CGAATGTAAGACCCCGGATGTAA 60.181 47.826 0.73 0.00 0.00 2.41
21 22 2.363038 CGAATGTAAGACCCCGGATGTA 59.637 50.000 0.73 0.00 0.00 2.29
22 23 1.138266 CGAATGTAAGACCCCGGATGT 59.862 52.381 0.73 0.00 0.00 3.06
23 24 1.865865 CGAATGTAAGACCCCGGATG 58.134 55.000 0.73 0.00 0.00 3.51
24 25 0.106149 GCGAATGTAAGACCCCGGAT 59.894 55.000 0.73 0.00 0.00 4.18
25 26 0.974010 AGCGAATGTAAGACCCCGGA 60.974 55.000 0.73 0.00 0.00 5.14
26 27 0.107848 AAGCGAATGTAAGACCCCGG 60.108 55.000 0.00 0.00 0.00 5.73
27 28 1.287425 GAAGCGAATGTAAGACCCCG 58.713 55.000 0.00 0.00 0.00 5.73
28 29 1.065709 TGGAAGCGAATGTAAGACCCC 60.066 52.381 0.00 0.00 0.00 4.95
29 30 2.396590 TGGAAGCGAATGTAAGACCC 57.603 50.000 0.00 0.00 0.00 4.46
30 31 3.426292 GCTTTGGAAGCGAATGTAAGACC 60.426 47.826 0.00 0.00 45.74 3.85
31 32 3.748298 GCTTTGGAAGCGAATGTAAGAC 58.252 45.455 0.00 0.00 45.74 3.01
43 44 3.745975 TGTTATGTGACGAGCTTTGGAAG 59.254 43.478 0.00 0.00 0.00 3.46
44 45 3.734463 TGTTATGTGACGAGCTTTGGAA 58.266 40.909 0.00 0.00 0.00 3.53
45 46 3.394674 TGTTATGTGACGAGCTTTGGA 57.605 42.857 0.00 0.00 0.00 3.53
46 47 4.024048 AGTTTGTTATGTGACGAGCTTTGG 60.024 41.667 0.00 0.00 0.00 3.28
47 48 5.095691 AGTTTGTTATGTGACGAGCTTTG 57.904 39.130 0.00 0.00 0.00 2.77
48 49 5.178809 GGTAGTTTGTTATGTGACGAGCTTT 59.821 40.000 0.00 0.00 0.00 3.51
49 50 4.689345 GGTAGTTTGTTATGTGACGAGCTT 59.311 41.667 0.00 0.00 0.00 3.74
50 51 4.243270 GGTAGTTTGTTATGTGACGAGCT 58.757 43.478 0.00 0.00 0.00 4.09
51 52 3.991773 TGGTAGTTTGTTATGTGACGAGC 59.008 43.478 0.00 0.00 0.00 5.03
52 53 5.464057 TGTTGGTAGTTTGTTATGTGACGAG 59.536 40.000 0.00 0.00 0.00 4.18
53 54 5.358090 TGTTGGTAGTTTGTTATGTGACGA 58.642 37.500 0.00 0.00 0.00 4.20
54 55 5.660629 TGTTGGTAGTTTGTTATGTGACG 57.339 39.130 0.00 0.00 0.00 4.35
55 56 6.861055 CCAATGTTGGTAGTTTGTTATGTGAC 59.139 38.462 3.58 0.00 43.43 3.67
56 57 6.976088 CCAATGTTGGTAGTTTGTTATGTGA 58.024 36.000 3.58 0.00 43.43 3.58
72 73 2.890311 TGTTTAGAGGGTGCCAATGTTG 59.110 45.455 0.00 0.00 0.00 3.33
73 74 3.237268 TGTTTAGAGGGTGCCAATGTT 57.763 42.857 0.00 0.00 0.00 2.71
74 75 2.969821 TGTTTAGAGGGTGCCAATGT 57.030 45.000 0.00 0.00 0.00 2.71
75 76 4.599047 TTTTGTTTAGAGGGTGCCAATG 57.401 40.909 0.00 0.00 0.00 2.82
95 96 4.972751 ATGGCCATTGTTGGTAGTTTTT 57.027 36.364 14.09 0.00 45.57 1.94
96 97 6.212388 TCAATATGGCCATTGTTGGTAGTTTT 59.788 34.615 28.83 7.20 45.57 2.43
97 98 5.719085 TCAATATGGCCATTGTTGGTAGTTT 59.281 36.000 28.83 7.57 45.57 2.66
98 99 5.268387 TCAATATGGCCATTGTTGGTAGTT 58.732 37.500 28.83 7.75 45.57 2.24
99 100 4.865905 TCAATATGGCCATTGTTGGTAGT 58.134 39.130 28.83 9.44 45.57 2.73
100 101 5.132502 TCTCAATATGGCCATTGTTGGTAG 58.867 41.667 28.83 22.94 45.57 3.18
101 102 5.122707 TCTCAATATGGCCATTGTTGGTA 57.877 39.130 28.83 19.94 45.57 3.25
102 103 3.979911 TCTCAATATGGCCATTGTTGGT 58.020 40.909 28.83 10.10 45.57 3.67
103 104 5.540400 AATCTCAATATGGCCATTGTTGG 57.460 39.130 28.83 22.53 46.66 3.77
104 105 7.852971 AAAAATCTCAATATGGCCATTGTTG 57.147 32.000 26.37 26.16 37.23 3.33
127 128 4.337836 TGCAAGTGTCAGCTCATACAAAAA 59.662 37.500 0.00 0.00 0.00 1.94
128 129 3.882288 TGCAAGTGTCAGCTCATACAAAA 59.118 39.130 0.00 0.00 0.00 2.44
129 130 3.250762 GTGCAAGTGTCAGCTCATACAAA 59.749 43.478 0.00 0.00 0.00 2.83
130 131 2.807967 GTGCAAGTGTCAGCTCATACAA 59.192 45.455 0.00 0.00 0.00 2.41
131 132 2.416747 GTGCAAGTGTCAGCTCATACA 58.583 47.619 0.00 0.00 0.00 2.29
132 133 1.391485 CGTGCAAGTGTCAGCTCATAC 59.609 52.381 0.00 0.00 0.00 2.39
133 134 1.000843 ACGTGCAAGTGTCAGCTCATA 59.999 47.619 3.91 0.00 0.00 2.15
134 135 0.250038 ACGTGCAAGTGTCAGCTCAT 60.250 50.000 3.91 0.00 0.00 2.90
135 136 1.143838 ACGTGCAAGTGTCAGCTCA 59.856 52.632 3.91 0.00 0.00 4.26
136 137 1.566563 CACGTGCAAGTGTCAGCTC 59.433 57.895 22.64 0.00 37.35 4.09
137 138 2.537560 GCACGTGCAAGTGTCAGCT 61.538 57.895 34.52 0.00 43.61 4.24
138 139 2.051882 GCACGTGCAAGTGTCAGC 60.052 61.111 34.52 14.64 43.61 4.26
155 156 1.135199 ACTAGTAATCGGGCACGTGTG 60.135 52.381 18.38 7.81 41.85 3.82
156 157 1.180029 ACTAGTAATCGGGCACGTGT 58.820 50.000 18.38 0.00 41.85 4.49
157 158 2.288961 AACTAGTAATCGGGCACGTG 57.711 50.000 12.28 12.28 41.85 4.49
243 244 5.074804 GGAGCAACTAGGGTTTCCTAAAAA 58.925 41.667 0.00 0.00 44.45 1.94
244 245 4.352893 AGGAGCAACTAGGGTTTCCTAAAA 59.647 41.667 6.40 0.00 44.45 1.52
245 246 3.914435 AGGAGCAACTAGGGTTTCCTAAA 59.086 43.478 6.40 0.00 44.45 1.85
246 247 3.527937 AGGAGCAACTAGGGTTTCCTAA 58.472 45.455 6.40 0.00 44.45 2.69
247 248 3.200958 AGGAGCAACTAGGGTTTCCTA 57.799 47.619 6.40 0.00 44.38 2.94
248 249 2.046280 AGGAGCAACTAGGGTTTCCT 57.954 50.000 0.00 0.00 46.96 3.36
249 250 2.570302 TGTAGGAGCAACTAGGGTTTCC 59.430 50.000 0.00 0.00 34.31 3.13
250 251 3.975168 TGTAGGAGCAACTAGGGTTTC 57.025 47.619 0.00 0.00 32.73 2.78
251 252 4.717279 TTTGTAGGAGCAACTAGGGTTT 57.283 40.909 0.00 0.00 32.73 3.27
252 253 4.288626 TGATTTGTAGGAGCAACTAGGGTT 59.711 41.667 0.00 0.00 35.86 4.11
253 254 3.844211 TGATTTGTAGGAGCAACTAGGGT 59.156 43.478 0.00 0.00 0.00 4.34
254 255 4.446371 CTGATTTGTAGGAGCAACTAGGG 58.554 47.826 0.00 0.00 0.00 3.53
255 256 3.873952 GCTGATTTGTAGGAGCAACTAGG 59.126 47.826 0.00 0.00 0.00 3.02
256 257 4.507710 TGCTGATTTGTAGGAGCAACTAG 58.492 43.478 0.00 0.00 38.48 2.57
257 258 4.551702 TGCTGATTTGTAGGAGCAACTA 57.448 40.909 0.00 0.00 38.48 2.24
258 259 3.423539 TGCTGATTTGTAGGAGCAACT 57.576 42.857 0.00 0.00 38.48 3.16
259 260 4.274459 CCTATGCTGATTTGTAGGAGCAAC 59.726 45.833 0.00 0.00 44.27 4.17
260 261 4.454678 CCTATGCTGATTTGTAGGAGCAA 58.545 43.478 0.00 0.00 44.27 3.91
261 262 3.745480 GCCTATGCTGATTTGTAGGAGCA 60.745 47.826 0.00 0.00 45.12 4.26
262 263 2.810852 GCCTATGCTGATTTGTAGGAGC 59.189 50.000 1.65 0.00 36.62 4.70
263 264 4.077300 TGCCTATGCTGATTTGTAGGAG 57.923 45.455 1.65 0.00 36.62 3.69
264 265 4.349048 AGATGCCTATGCTGATTTGTAGGA 59.651 41.667 1.65 0.00 36.62 2.94
265 266 4.649692 AGATGCCTATGCTGATTTGTAGG 58.350 43.478 0.00 0.00 38.71 3.18
266 267 5.996513 AGAAGATGCCTATGCTGATTTGTAG 59.003 40.000 0.00 0.00 38.71 2.74
267 268 5.933617 AGAAGATGCCTATGCTGATTTGTA 58.066 37.500 0.00 0.00 38.71 2.41
268 269 4.789807 AGAAGATGCCTATGCTGATTTGT 58.210 39.130 0.00 0.00 38.71 2.83
269 270 7.450124 AATAGAAGATGCCTATGCTGATTTG 57.550 36.000 0.00 0.00 38.71 2.32
282 283 3.956233 TGCGCATGAAAATAGAAGATGC 58.044 40.909 5.66 0.00 36.81 3.91
308 309 2.594592 GCACGTGGTCTTGGCCTT 60.595 61.111 18.88 0.00 0.00 4.35
309 310 4.643387 GGCACGTGGTCTTGGCCT 62.643 66.667 18.88 0.00 41.39 5.19
322 323 2.434185 TGATCTCGGTTGCGGCAC 60.434 61.111 0.05 0.00 0.00 5.01
323 324 1.960040 ATCTGATCTCGGTTGCGGCA 61.960 55.000 0.00 0.00 0.00 5.69
324 325 0.811616 AATCTGATCTCGGTTGCGGC 60.812 55.000 0.00 0.00 0.00 6.53
325 326 2.398498 CTAATCTGATCTCGGTTGCGG 58.602 52.381 0.00 0.00 0.00 5.69
326 327 2.398498 CCTAATCTGATCTCGGTTGCG 58.602 52.381 0.00 0.00 0.00 4.85
327 328 2.760374 CCCTAATCTGATCTCGGTTGC 58.240 52.381 0.00 0.00 0.00 4.17
328 329 2.760374 GCCCTAATCTGATCTCGGTTG 58.240 52.381 0.00 0.00 0.00 3.77
329 330 1.341531 CGCCCTAATCTGATCTCGGTT 59.658 52.381 0.00 0.00 0.00 4.44
330 331 0.962489 CGCCCTAATCTGATCTCGGT 59.038 55.000 0.00 0.00 0.00 4.69
331 332 0.962489 ACGCCCTAATCTGATCTCGG 59.038 55.000 0.00 0.00 0.00 4.63
332 333 1.883275 AGACGCCCTAATCTGATCTCG 59.117 52.381 0.00 0.00 0.00 4.04
333 334 2.625790 ACAGACGCCCTAATCTGATCTC 59.374 50.000 8.18 0.00 44.32 2.75
334 335 2.672098 ACAGACGCCCTAATCTGATCT 58.328 47.619 8.18 0.00 44.32 2.75
335 336 3.305471 GGTACAGACGCCCTAATCTGATC 60.305 52.174 8.18 0.00 44.32 2.92
336 337 2.628657 GGTACAGACGCCCTAATCTGAT 59.371 50.000 8.18 0.00 44.32 2.90
337 338 2.029623 GGTACAGACGCCCTAATCTGA 58.970 52.381 8.18 0.00 44.32 3.27
338 339 1.068741 GGGTACAGACGCCCTAATCTG 59.931 57.143 0.00 0.00 46.49 2.90
339 340 1.411041 GGGTACAGACGCCCTAATCT 58.589 55.000 0.00 0.00 41.63 2.40
340 341 3.982709 GGGTACAGACGCCCTAATC 57.017 57.895 0.00 0.00 41.63 1.75
347 348 2.038387 ATTGATTGGGGTACAGACGC 57.962 50.000 0.00 0.00 37.79 5.19
348 349 4.402056 ACTATTGATTGGGGTACAGACG 57.598 45.455 0.00 0.00 0.00 4.18
349 350 5.123936 GGAACTATTGATTGGGGTACAGAC 58.876 45.833 0.00 0.00 0.00 3.51
350 351 4.785914 TGGAACTATTGATTGGGGTACAGA 59.214 41.667 0.00 0.00 0.00 3.41
351 352 5.110814 TGGAACTATTGATTGGGGTACAG 57.889 43.478 0.00 0.00 0.00 2.74
352 353 5.258051 GTTGGAACTATTGATTGGGGTACA 58.742 41.667 0.00 0.00 0.00 2.90
353 354 4.334481 CGTTGGAACTATTGATTGGGGTAC 59.666 45.833 0.00 0.00 0.00 3.34
354 355 4.519213 CGTTGGAACTATTGATTGGGGTA 58.481 43.478 0.00 0.00 0.00 3.69
355 356 3.352648 CGTTGGAACTATTGATTGGGGT 58.647 45.455 0.00 0.00 0.00 4.95
356 357 2.099098 GCGTTGGAACTATTGATTGGGG 59.901 50.000 0.00 0.00 0.00 4.96
357 358 3.016736 AGCGTTGGAACTATTGATTGGG 58.983 45.455 0.00 0.00 0.00 4.12
358 359 3.689161 TGAGCGTTGGAACTATTGATTGG 59.311 43.478 0.00 0.00 0.00 3.16
359 360 4.437390 GGTGAGCGTTGGAACTATTGATTG 60.437 45.833 0.00 0.00 0.00 2.67
360 361 3.689649 GGTGAGCGTTGGAACTATTGATT 59.310 43.478 0.00 0.00 0.00 2.57
361 362 3.270877 GGTGAGCGTTGGAACTATTGAT 58.729 45.455 0.00 0.00 0.00 2.57
362 363 2.037902 TGGTGAGCGTTGGAACTATTGA 59.962 45.455 0.00 0.00 0.00 2.57
363 364 2.422597 TGGTGAGCGTTGGAACTATTG 58.577 47.619 0.00 0.00 0.00 1.90
364 365 2.851263 TGGTGAGCGTTGGAACTATT 57.149 45.000 0.00 0.00 0.00 1.73
365 366 2.632377 CATGGTGAGCGTTGGAACTAT 58.368 47.619 0.00 0.00 0.00 2.12
366 367 1.338674 CCATGGTGAGCGTTGGAACTA 60.339 52.381 2.57 0.00 0.00 2.24
367 368 0.606401 CCATGGTGAGCGTTGGAACT 60.606 55.000 2.57 0.00 0.00 3.01
368 369 1.875963 CCATGGTGAGCGTTGGAAC 59.124 57.895 2.57 0.00 0.00 3.62
369 370 1.971167 GCCATGGTGAGCGTTGGAA 60.971 57.895 14.67 0.00 0.00 3.53
370 371 2.359850 GCCATGGTGAGCGTTGGA 60.360 61.111 14.67 0.00 0.00 3.53
376 377 2.512515 GACTCCGCCATGGTGAGC 60.513 66.667 27.12 16.40 39.52 4.26
377 378 2.187946 GGACTCCGCCATGGTGAG 59.812 66.667 27.12 25.16 39.52 3.51
378 379 3.770040 CGGACTCCGCCATGGTGA 61.770 66.667 27.12 15.61 41.17 4.02
389 390 4.131088 GTGGACGGGCTCGGACTC 62.131 72.222 12.42 0.00 41.39 3.36
401 402 3.284449 GTGGTGTTGGCGGTGGAC 61.284 66.667 0.00 0.00 0.00 4.02
402 403 4.572571 GGTGGTGTTGGCGGTGGA 62.573 66.667 0.00 0.00 0.00 4.02
403 404 4.885270 TGGTGGTGTTGGCGGTGG 62.885 66.667 0.00 0.00 0.00 4.61
404 405 3.591835 GTGGTGGTGTTGGCGGTG 61.592 66.667 0.00 0.00 0.00 4.94
405 406 4.887190 GGTGGTGGTGTTGGCGGT 62.887 66.667 0.00 0.00 0.00 5.68
409 410 3.286751 CTGCGGTGGTGGTGTTGG 61.287 66.667 0.00 0.00 0.00 3.77
410 411 3.286751 CCTGCGGTGGTGGTGTTG 61.287 66.667 0.00 0.00 0.00 3.33
416 417 3.958147 CTAGGTGCCTGCGGTGGTG 62.958 68.421 0.12 0.00 0.00 4.17
417 418 3.706373 CTAGGTGCCTGCGGTGGT 61.706 66.667 0.12 0.00 0.00 4.16
418 419 2.650813 GATCTAGGTGCCTGCGGTGG 62.651 65.000 0.12 0.00 0.00 4.61
419 420 1.227380 GATCTAGGTGCCTGCGGTG 60.227 63.158 0.12 0.00 0.00 4.94
420 421 2.435693 GGATCTAGGTGCCTGCGGT 61.436 63.158 0.12 0.00 0.00 5.68
421 422 2.423446 GGATCTAGGTGCCTGCGG 59.577 66.667 0.12 0.00 0.00 5.69
422 423 2.423446 GGGATCTAGGTGCCTGCG 59.577 66.667 6.24 0.00 0.00 5.18
423 424 2.423446 CGGGATCTAGGTGCCTGC 59.577 66.667 12.24 0.00 0.00 4.85
424 425 2.511452 CCCGGGATCTAGGTGCCTG 61.511 68.421 18.48 4.88 0.00 4.85
425 426 2.122813 CCCGGGATCTAGGTGCCT 60.123 66.667 18.48 0.00 0.00 4.75
426 427 3.942439 GCCCGGGATCTAGGTGCC 61.942 72.222 29.31 2.81 0.00 5.01
427 428 3.942439 GGCCCGGGATCTAGGTGC 61.942 72.222 29.31 4.51 0.00 5.01
428 429 3.242291 GGGCCCGGGATCTAGGTG 61.242 72.222 29.31 0.00 0.00 4.00
429 430 3.449126 AGGGCCCGGGATCTAGGT 61.449 66.667 29.31 0.00 0.00 3.08
430 431 2.604991 GAGGGCCCGGGATCTAGG 60.605 72.222 29.31 0.00 0.00 3.02
431 432 2.604991 GGAGGGCCCGGGATCTAG 60.605 72.222 29.31 0.00 0.00 2.43
432 433 3.444417 TGGAGGGCCCGGGATCTA 61.444 66.667 29.31 13.98 37.93 1.98
459 460 4.120331 GTTGGGTGATGGCTGCGC 62.120 66.667 0.00 0.00 0.00 6.09
460 461 3.803082 CGTTGGGTGATGGCTGCG 61.803 66.667 0.00 0.00 0.00 5.18
461 462 4.120331 GCGTTGGGTGATGGCTGC 62.120 66.667 0.00 0.00 0.00 5.25
462 463 2.360350 AGCGTTGGGTGATGGCTG 60.360 61.111 0.00 0.00 31.74 4.85
463 464 2.360350 CAGCGTTGGGTGATGGCT 60.360 61.111 0.00 0.00 44.37 4.75
464 465 2.672996 ACAGCGTTGGGTGATGGC 60.673 61.111 3.74 0.00 44.37 4.40
465 466 2.040544 GGACAGCGTTGGGTGATGG 61.041 63.158 3.74 0.00 44.37 3.51
466 467 0.888736 TTGGACAGCGTTGGGTGATG 60.889 55.000 3.74 0.00 44.37 3.07
467 468 0.889186 GTTGGACAGCGTTGGGTGAT 60.889 55.000 3.74 0.00 44.37 3.06
468 469 1.525077 GTTGGACAGCGTTGGGTGA 60.525 57.895 3.74 0.00 44.37 4.02
469 470 2.892334 CGTTGGACAGCGTTGGGTG 61.892 63.158 3.74 0.00 46.91 4.61
470 471 2.590575 CGTTGGACAGCGTTGGGT 60.591 61.111 3.74 0.00 0.00 4.51
471 472 4.025401 GCGTTGGACAGCGTTGGG 62.025 66.667 10.10 0.00 37.36 4.12
477 478 0.872021 CTAGGATCGCGTTGGACAGC 60.872 60.000 5.77 0.00 0.00 4.40
478 479 0.456221 ACTAGGATCGCGTTGGACAG 59.544 55.000 5.77 0.27 0.00 3.51
479 480 0.892755 AACTAGGATCGCGTTGGACA 59.107 50.000 5.77 0.00 0.00 4.02
480 481 2.005971 AAACTAGGATCGCGTTGGAC 57.994 50.000 5.77 0.00 0.00 4.02
481 482 2.754946 AAAACTAGGATCGCGTTGGA 57.245 45.000 5.77 0.00 0.00 3.53
482 483 5.479716 AATAAAAACTAGGATCGCGTTGG 57.520 39.130 5.77 0.00 0.00 3.77
483 484 7.230466 AGTAATAAAAACTAGGATCGCGTTG 57.770 36.000 5.77 0.00 0.00 4.10
484 485 7.010830 GGAAGTAATAAAAACTAGGATCGCGTT 59.989 37.037 5.77 0.00 0.00 4.84
485 486 6.478016 GGAAGTAATAAAAACTAGGATCGCGT 59.522 38.462 5.77 0.00 0.00 6.01
486 487 6.700520 AGGAAGTAATAAAAACTAGGATCGCG 59.299 38.462 0.00 0.00 0.00 5.87
487 488 8.434733 AAGGAAGTAATAAAAACTAGGATCGC 57.565 34.615 0.00 0.00 0.00 4.58
488 489 8.753175 CGAAGGAAGTAATAAAAACTAGGATCG 58.247 37.037 0.00 0.00 0.00 3.69
489 490 8.549548 GCGAAGGAAGTAATAAAAACTAGGATC 58.450 37.037 0.00 0.00 0.00 3.36
490 491 8.265764 AGCGAAGGAAGTAATAAAAACTAGGAT 58.734 33.333 0.00 0.00 0.00 3.24
491 492 7.618137 AGCGAAGGAAGTAATAAAAACTAGGA 58.382 34.615 0.00 0.00 0.00 2.94
492 493 7.845066 AGCGAAGGAAGTAATAAAAACTAGG 57.155 36.000 0.00 0.00 0.00 3.02
493 494 9.152595 AGAAGCGAAGGAAGTAATAAAAACTAG 57.847 33.333 0.00 0.00 0.00 2.57
495 496 7.981102 AGAAGCGAAGGAAGTAATAAAAACT 57.019 32.000 0.00 0.00 0.00 2.66
502 503 9.482627 CAGATATTTAGAAGCGAAGGAAGTAAT 57.517 33.333 0.00 0.00 0.00 1.89
503 504 8.475639 ACAGATATTTAGAAGCGAAGGAAGTAA 58.524 33.333 0.00 0.00 0.00 2.24
504 505 8.008513 ACAGATATTTAGAAGCGAAGGAAGTA 57.991 34.615 0.00 0.00 0.00 2.24
505 506 6.879400 ACAGATATTTAGAAGCGAAGGAAGT 58.121 36.000 0.00 0.00 0.00 3.01
506 507 7.206687 AGACAGATATTTAGAAGCGAAGGAAG 58.793 38.462 0.00 0.00 0.00 3.46
507 508 7.113658 AGACAGATATTTAGAAGCGAAGGAA 57.886 36.000 0.00 0.00 0.00 3.36
508 509 6.716934 AGACAGATATTTAGAAGCGAAGGA 57.283 37.500 0.00 0.00 0.00 3.36
509 510 7.778470 AAAGACAGATATTTAGAAGCGAAGG 57.222 36.000 0.00 0.00 0.00 3.46
542 543 9.179909 ACATTCGTATATGGTGGTTTATTTGAA 57.820 29.630 0.00 0.00 0.00 2.69
543 544 8.740123 ACATTCGTATATGGTGGTTTATTTGA 57.260 30.769 0.00 0.00 0.00 2.69
651 652 8.562892 CGTTTCTACTATCTCCGTTCCTAAATA 58.437 37.037 0.00 0.00 0.00 1.40
652 653 7.284034 TCGTTTCTACTATCTCCGTTCCTAAAT 59.716 37.037 0.00 0.00 0.00 1.40
653 654 6.599244 TCGTTTCTACTATCTCCGTTCCTAAA 59.401 38.462 0.00 0.00 0.00 1.85
654 655 6.115446 TCGTTTCTACTATCTCCGTTCCTAA 58.885 40.000 0.00 0.00 0.00 2.69
655 656 5.674525 TCGTTTCTACTATCTCCGTTCCTA 58.325 41.667 0.00 0.00 0.00 2.94
656 657 4.521146 TCGTTTCTACTATCTCCGTTCCT 58.479 43.478 0.00 0.00 0.00 3.36
657 658 4.889832 TCGTTTCTACTATCTCCGTTCC 57.110 45.455 0.00 0.00 0.00 3.62
658 659 6.250951 CAGTTTCGTTTCTACTATCTCCGTTC 59.749 42.308 0.00 0.00 0.00 3.95
659 660 6.072286 TCAGTTTCGTTTCTACTATCTCCGTT 60.072 38.462 0.00 0.00 0.00 4.44
660 661 5.413833 TCAGTTTCGTTTCTACTATCTCCGT 59.586 40.000 0.00 0.00 0.00 4.69
661 662 5.738225 GTCAGTTTCGTTTCTACTATCTCCG 59.262 44.000 0.00 0.00 0.00 4.63
662 663 6.618811 TGTCAGTTTCGTTTCTACTATCTCC 58.381 40.000 0.00 0.00 0.00 3.71
663 664 7.968956 TGATGTCAGTTTCGTTTCTACTATCTC 59.031 37.037 0.00 0.00 0.00 2.75
664 665 7.827701 TGATGTCAGTTTCGTTTCTACTATCT 58.172 34.615 0.00 0.00 0.00 1.98
665 666 8.462143 TTGATGTCAGTTTCGTTTCTACTATC 57.538 34.615 0.00 0.00 0.00 2.08
666 667 9.436957 AATTGATGTCAGTTTCGTTTCTACTAT 57.563 29.630 0.00 0.00 0.00 2.12
667 668 8.827177 AATTGATGTCAGTTTCGTTTCTACTA 57.173 30.769 0.00 0.00 0.00 1.82
668 669 7.730364 AATTGATGTCAGTTTCGTTTCTACT 57.270 32.000 0.00 0.00 0.00 2.57
669 670 8.782533 AAAATTGATGTCAGTTTCGTTTCTAC 57.217 30.769 4.32 0.00 35.21 2.59
699 700 9.939802 GAAAAACTAATGTTAGGGTCTCTCTTA 57.060 33.333 4.92 0.00 34.96 2.10
700 701 8.661345 AGAAAAACTAATGTTAGGGTCTCTCTT 58.339 33.333 4.92 0.00 34.96 2.85
701 702 8.208575 AGAAAAACTAATGTTAGGGTCTCTCT 57.791 34.615 4.92 0.00 34.96 3.10
702 703 8.850007 AAGAAAAACTAATGTTAGGGTCTCTC 57.150 34.615 4.92 0.00 34.96 3.20
703 704 9.642343 AAAAGAAAAACTAATGTTAGGGTCTCT 57.358 29.630 4.92 0.00 34.96 3.10
704 705 9.894783 GAAAAGAAAAACTAATGTTAGGGTCTC 57.105 33.333 4.92 0.00 34.96 3.36
705 706 9.416284 TGAAAAGAAAAACTAATGTTAGGGTCT 57.584 29.630 4.92 0.00 34.96 3.85
706 707 9.678941 CTGAAAAGAAAAACTAATGTTAGGGTC 57.321 33.333 4.92 0.00 34.96 4.46
707 708 8.638873 CCTGAAAAGAAAAACTAATGTTAGGGT 58.361 33.333 4.92 0.00 34.96 4.34
708 709 8.088365 CCCTGAAAAGAAAAACTAATGTTAGGG 58.912 37.037 4.92 0.00 34.96 3.53
709 710 8.856103 TCCCTGAAAAGAAAAACTAATGTTAGG 58.144 33.333 4.92 0.00 34.96 2.69
714 715 9.639601 GGTTATCCCTGAAAAGAAAAACTAATG 57.360 33.333 0.00 0.00 0.00 1.90
715 716 8.520351 CGGTTATCCCTGAAAAGAAAAACTAAT 58.480 33.333 0.00 0.00 0.00 1.73
716 717 7.503230 ACGGTTATCCCTGAAAAGAAAAACTAA 59.497 33.333 0.00 0.00 0.00 2.24
717 718 6.999871 ACGGTTATCCCTGAAAAGAAAAACTA 59.000 34.615 0.00 0.00 0.00 2.24
718 719 5.831525 ACGGTTATCCCTGAAAAGAAAAACT 59.168 36.000 0.00 0.00 0.00 2.66
719 720 6.080648 ACGGTTATCCCTGAAAAGAAAAAC 57.919 37.500 0.00 0.00 0.00 2.43
720 721 5.242171 GGACGGTTATCCCTGAAAAGAAAAA 59.758 40.000 0.00 0.00 31.94 1.94
721 722 4.763279 GGACGGTTATCCCTGAAAAGAAAA 59.237 41.667 0.00 0.00 31.94 2.29
722 723 4.329392 GGACGGTTATCCCTGAAAAGAAA 58.671 43.478 0.00 0.00 31.94 2.52
723 724 3.946606 GGACGGTTATCCCTGAAAAGAA 58.053 45.455 0.00 0.00 31.94 2.52
724 725 3.622166 GGACGGTTATCCCTGAAAAGA 57.378 47.619 0.00 0.00 31.94 2.52
777 778 9.569122 GGGAACAATATAATTAGCTTACCTTCA 57.431 33.333 0.00 0.00 0.00 3.02
778 779 9.569122 TGGGAACAATATAATTAGCTTACCTTC 57.431 33.333 0.00 0.00 37.44 3.46
798 799 1.747355 CCTGTGCTGATTCATGGGAAC 59.253 52.381 0.00 0.00 35.46 3.62
799 800 1.956636 GCCTGTGCTGATTCATGGGAA 60.957 52.381 0.00 0.00 33.98 3.97
800 801 0.394762 GCCTGTGCTGATTCATGGGA 60.395 55.000 0.00 0.00 33.53 4.37
801 802 0.681887 TGCCTGTGCTGATTCATGGG 60.682 55.000 0.00 0.00 38.71 4.00
802 803 1.067060 CATGCCTGTGCTGATTCATGG 59.933 52.381 0.00 0.00 38.71 3.66
803 804 1.749063 ACATGCCTGTGCTGATTCATG 59.251 47.619 0.00 0.00 38.71 3.07
804 805 2.139323 ACATGCCTGTGCTGATTCAT 57.861 45.000 0.00 0.00 38.71 2.57
805 806 1.913778 AACATGCCTGTGCTGATTCA 58.086 45.000 0.00 0.00 38.71 2.57
806 807 3.308438 AAAACATGCCTGTGCTGATTC 57.692 42.857 0.00 0.00 38.71 2.52
807 808 3.756933 AAAAACATGCCTGTGCTGATT 57.243 38.095 0.00 0.00 38.71 2.57
843 844 9.139174 CAAACATAAAAAGATATCGGTGCTTTT 57.861 29.630 5.56 5.56 41.95 2.27
846 847 7.391148 ACAAACATAAAAAGATATCGGTGCT 57.609 32.000 0.00 0.00 0.00 4.40
847 848 7.009174 CCAACAAACATAAAAAGATATCGGTGC 59.991 37.037 0.00 0.00 0.00 5.01
848 849 7.487829 CCCAACAAACATAAAAAGATATCGGTG 59.512 37.037 0.00 0.00 0.00 4.94
849 850 7.543756 CCCAACAAACATAAAAAGATATCGGT 58.456 34.615 0.00 0.00 0.00 4.69
850 851 6.475402 GCCCAACAAACATAAAAAGATATCGG 59.525 38.462 0.00 0.00 0.00 4.18
851 852 6.475402 GGCCCAACAAACATAAAAAGATATCG 59.525 38.462 0.00 0.00 0.00 2.92
853 854 6.071051 ACGGCCCAACAAACATAAAAAGATAT 60.071 34.615 0.00 0.00 0.00 1.63
854 855 5.244178 ACGGCCCAACAAACATAAAAAGATA 59.756 36.000 0.00 0.00 0.00 1.98
857 858 3.723260 ACGGCCCAACAAACATAAAAAG 58.277 40.909 0.00 0.00 0.00 2.27
886 921 4.493547 CCTCTCACTAGAAAAGCTCAGTG 58.506 47.826 0.00 0.00 39.79 3.66
887 922 3.056179 GCCTCTCACTAGAAAAGCTCAGT 60.056 47.826 0.00 0.00 0.00 3.41
888 923 3.520569 GCCTCTCACTAGAAAAGCTCAG 58.479 50.000 0.00 0.00 0.00 3.35
890 925 2.234908 TGGCCTCTCACTAGAAAAGCTC 59.765 50.000 3.32 0.00 0.00 4.09
906 946 2.590092 GAATACACGGGCTGGCCT 59.410 61.111 18.81 1.96 36.10 5.19
907 947 2.516225 GGAATACACGGGCTGGCC 60.516 66.667 10.75 10.75 0.00 5.36
1141 1219 0.249657 CATAGCTTGGAGACGAGGGC 60.250 60.000 0.00 0.00 42.59 5.19
1395 1515 0.034863 TAGGCCAAAACCGGATGACC 60.035 55.000 9.46 6.14 33.69 4.02
1417 1537 2.632996 AGACAGGATGAAACACGAGGAA 59.367 45.455 0.00 0.00 39.69 3.36
1458 1578 5.004821 CTGTAAGAAATCTGACGGAATGTCG 59.995 44.000 0.97 0.00 44.39 4.35
1520 1643 4.791069 GGCCCTGGTCGTCCCCTA 62.791 72.222 0.00 0.00 0.00 3.53
1558 1681 0.542702 ACAACCTTGAAGGGGCATGG 60.543 55.000 16.78 0.00 40.58 3.66
1560 1683 0.779997 AGACAACCTTGAAGGGGCAT 59.220 50.000 16.78 0.00 40.58 4.40
1968 2091 7.819644 TCTTGTGAATGTCAATAATCTTGTGG 58.180 34.615 0.00 0.00 0.00 4.17
2122 2245 0.610232 AGTTTCCTGGACTGCATGGC 60.610 55.000 0.00 0.00 0.00 4.40
2163 2286 1.067142 TGTGCGAACAGATGGTAGGAC 60.067 52.381 0.00 0.00 32.13 3.85
2182 2305 7.502120 AGCAATTACCTGCAGTATAGAAATG 57.498 36.000 13.81 3.88 45.18 2.32
2211 2334 6.732862 AGATTCAGCTACCCCTATGATGTAAT 59.267 38.462 0.00 0.00 0.00 1.89
2224 2347 3.669251 ATAAGCGGAGATTCAGCTACC 57.331 47.619 4.23 0.00 46.83 3.18
2597 2736 0.240945 AAGGTGTACGCTTTGCATGC 59.759 50.000 11.82 11.82 0.00 4.06
2736 2877 3.009473 TCAAGAGCTGGGCATAAGAAACT 59.991 43.478 0.00 0.00 0.00 2.66
2812 2953 3.821841 ACCGAAAATCAAAACGCTGATC 58.178 40.909 0.00 0.00 34.90 2.92
2813 2954 3.915437 ACCGAAAATCAAAACGCTGAT 57.085 38.095 0.00 0.00 37.66 2.90
2814 2955 3.701532 AACCGAAAATCAAAACGCTGA 57.298 38.095 0.00 0.00 0.00 4.26
2815 2956 3.549873 ACAAACCGAAAATCAAAACGCTG 59.450 39.130 0.00 0.00 0.00 5.18
2816 2957 3.549873 CACAAACCGAAAATCAAAACGCT 59.450 39.130 0.00 0.00 0.00 5.07
2817 2958 3.548268 TCACAAACCGAAAATCAAAACGC 59.452 39.130 0.00 0.00 0.00 4.84
2818 2959 5.881637 ATCACAAACCGAAAATCAAAACG 57.118 34.783 0.00 0.00 0.00 3.60
2819 2960 8.888332 AAAAATCACAAACCGAAAATCAAAAC 57.112 26.923 0.00 0.00 0.00 2.43
2820 2961 8.940952 AGAAAAATCACAAACCGAAAATCAAAA 58.059 25.926 0.00 0.00 0.00 2.44
2821 2962 8.485976 AGAAAAATCACAAACCGAAAATCAAA 57.514 26.923 0.00 0.00 0.00 2.69
2822 2963 7.043722 CGAGAAAAATCACAAACCGAAAATCAA 60.044 33.333 0.00 0.00 0.00 2.57
2823 2964 6.416455 CGAGAAAAATCACAAACCGAAAATCA 59.584 34.615 0.00 0.00 0.00 2.57
2824 2965 6.613536 GCGAGAAAAATCACAAACCGAAAATC 60.614 38.462 0.00 0.00 0.00 2.17
2825 2966 5.174943 GCGAGAAAAATCACAAACCGAAAAT 59.825 36.000 0.00 0.00 0.00 1.82
2826 2967 4.501198 GCGAGAAAAATCACAAACCGAAAA 59.499 37.500 0.00 0.00 0.00 2.29
2827 2968 4.039032 GCGAGAAAAATCACAAACCGAAA 58.961 39.130 0.00 0.00 0.00 3.46
2828 2969 3.549221 GGCGAGAAAAATCACAAACCGAA 60.549 43.478 0.00 0.00 0.00 4.30
2829 2970 2.031508 GGCGAGAAAAATCACAAACCGA 60.032 45.455 0.00 0.00 0.00 4.69
2830 2971 2.315901 GGCGAGAAAAATCACAAACCG 58.684 47.619 0.00 0.00 0.00 4.44
2831 2972 2.296190 AGGGCGAGAAAAATCACAAACC 59.704 45.455 0.00 0.00 0.00 3.27
2832 2973 3.643159 AGGGCGAGAAAAATCACAAAC 57.357 42.857 0.00 0.00 0.00 2.93
2833 2974 3.756434 CCTAGGGCGAGAAAAATCACAAA 59.244 43.478 0.00 0.00 0.00 2.83
2834 2975 3.343617 CCTAGGGCGAGAAAAATCACAA 58.656 45.455 0.00 0.00 0.00 3.33
2835 2976 2.939640 GCCTAGGGCGAGAAAAATCACA 60.940 50.000 11.72 0.00 39.62 3.58
2836 2977 1.671328 GCCTAGGGCGAGAAAAATCAC 59.329 52.381 11.72 0.00 39.62 3.06
2837 2978 2.038387 GCCTAGGGCGAGAAAAATCA 57.962 50.000 11.72 0.00 39.62 2.57
2856 2997 1.934463 CGAAATTCGGCCATCTCGG 59.066 57.895 7.61 0.00 36.00 4.63
2866 3007 8.959761 AAATTTTTAAAAACGACCGAAATTCG 57.040 26.923 15.35 8.62 42.36 3.34
2867 3008 9.073266 CGAAATTTTTAAAAACGACCGAAATTC 57.927 29.630 15.35 8.09 0.00 2.17
2868 3009 8.057156 CCGAAATTTTTAAAAACGACCGAAATT 58.943 29.630 15.35 0.63 0.00 1.82
2869 3010 7.557285 CCGAAATTTTTAAAAACGACCGAAAT 58.443 30.769 15.35 0.00 0.00 2.17
2870 3011 6.507614 GCCGAAATTTTTAAAAACGACCGAAA 60.508 34.615 15.35 0.00 0.00 3.46
2871 3012 5.051841 GCCGAAATTTTTAAAAACGACCGAA 60.052 36.000 15.35 0.00 0.00 4.30
2872 3013 4.440431 GCCGAAATTTTTAAAAACGACCGA 59.560 37.500 15.35 0.00 0.00 4.69
2873 3014 4.375205 GGCCGAAATTTTTAAAAACGACCG 60.375 41.667 15.35 14.74 0.00 4.79
2874 3015 4.746115 AGGCCGAAATTTTTAAAAACGACC 59.254 37.500 15.35 15.26 0.00 4.79
2875 3016 5.893512 AGGCCGAAATTTTTAAAAACGAC 57.106 34.783 15.35 7.56 0.00 4.34
2876 3017 7.998753 TTTAGGCCGAAATTTTTAAAAACGA 57.001 28.000 15.35 0.00 0.00 3.85
2877 3018 9.653067 AAATTTAGGCCGAAATTTTTAAAAACG 57.347 25.926 31.79 13.78 43.29 3.60
2881 3022 8.775527 GGTCAAATTTAGGCCGAAATTTTTAAA 58.224 29.630 33.71 21.60 43.29 1.52
2882 3023 7.931948 TGGTCAAATTTAGGCCGAAATTTTTAA 59.068 29.630 33.71 23.40 43.29 1.52
2883 3024 7.442656 TGGTCAAATTTAGGCCGAAATTTTTA 58.557 30.769 33.71 25.25 43.29 1.52
2884 3025 6.292150 TGGTCAAATTTAGGCCGAAATTTTT 58.708 32.000 33.71 20.33 43.29 1.94
2885 3026 5.859495 TGGTCAAATTTAGGCCGAAATTTT 58.141 33.333 33.71 21.79 43.29 1.82
2886 3027 5.476091 TGGTCAAATTTAGGCCGAAATTT 57.524 34.783 31.79 31.79 45.50 1.82
2887 3028 5.476091 TTGGTCAAATTTAGGCCGAAATT 57.524 34.783 25.60 25.60 40.03 1.82
2888 3029 5.675684 ATTGGTCAAATTTAGGCCGAAAT 57.324 34.783 17.19 17.19 0.00 2.17
2889 3030 5.476091 AATTGGTCAAATTTAGGCCGAAA 57.524 34.783 13.75 13.75 34.72 3.46
2890 3031 5.476091 AAATTGGTCAAATTTAGGCCGAA 57.524 34.783 0.00 0.00 44.84 4.30
2891 3032 5.476091 AAAATTGGTCAAATTTAGGCCGA 57.524 34.783 0.00 0.00 45.73 5.54
2892 3033 5.698545 TCAAAAATTGGTCAAATTTAGGCCG 59.301 36.000 0.00 0.00 45.73 6.13
2893 3034 6.710295 AGTCAAAAATTGGTCAAATTTAGGCC 59.290 34.615 0.00 0.00 45.73 5.19
2894 3035 7.440856 TCAGTCAAAAATTGGTCAAATTTAGGC 59.559 33.333 0.00 0.00 45.73 3.93
2895 3036 8.885494 TCAGTCAAAAATTGGTCAAATTTAGG 57.115 30.769 0.00 0.00 45.73 2.69
2901 3042 9.224267 TCAAATTTCAGTCAAAAATTGGTCAAA 57.776 25.926 0.00 0.00 36.65 2.69
2902 3043 8.783833 TCAAATTTCAGTCAAAAATTGGTCAA 57.216 26.923 0.00 0.00 36.65 3.18
2903 3044 8.961294 ATCAAATTTCAGTCAAAAATTGGTCA 57.039 26.923 0.00 0.00 36.65 4.02
2935 3076 9.610705 TGGTCAAATTTGAGAAATTTTGATCAA 57.389 25.926 21.05 3.38 46.01 2.57
2936 3077 9.610705 TTGGTCAAATTTGAGAAATTTTGATCA 57.389 25.926 21.05 13.60 46.01 2.92
2941 3082 9.934190 CGAAATTGGTCAAATTTGAGAAATTTT 57.066 25.926 30.89 22.60 46.01 1.82
2942 3083 8.558700 CCGAAATTGGTCAAATTTGAGAAATTT 58.441 29.630 30.86 30.86 46.29 1.82
2943 3084 7.307930 GCCGAAATTGGTCAAATTTGAGAAATT 60.308 33.333 21.05 22.40 46.29 1.82
2944 3085 6.147656 GCCGAAATTGGTCAAATTTGAGAAAT 59.852 34.615 21.05 18.58 46.29 2.17
2945 3086 5.465056 GCCGAAATTGGTCAAATTTGAGAAA 59.535 36.000 21.05 17.28 46.29 2.52
2946 3087 4.987912 GCCGAAATTGGTCAAATTTGAGAA 59.012 37.500 21.05 16.20 46.29 2.87
2947 3088 4.555262 GCCGAAATTGGTCAAATTTGAGA 58.445 39.130 21.05 10.65 46.29 3.27
2948 3089 3.364621 CGCCGAAATTGGTCAAATTTGAG 59.635 43.478 21.05 7.43 46.29 3.02
2949 3090 3.312828 CGCCGAAATTGGTCAAATTTGA 58.687 40.909 16.91 16.91 46.29 2.69
2950 3091 2.411409 CCGCCGAAATTGGTCAAATTTG 59.589 45.455 12.15 12.15 46.29 2.32
2952 3093 1.889829 TCCGCCGAAATTGGTCAAATT 59.110 42.857 0.00 0.00 40.32 1.82
2953 3094 1.540267 TCCGCCGAAATTGGTCAAAT 58.460 45.000 0.00 0.00 0.00 2.32
2954 3095 1.268352 CTTCCGCCGAAATTGGTCAAA 59.732 47.619 0.00 0.00 0.00 2.69
2955 3096 0.878416 CTTCCGCCGAAATTGGTCAA 59.122 50.000 0.00 0.00 0.00 3.18
2956 3097 0.035598 TCTTCCGCCGAAATTGGTCA 59.964 50.000 0.00 0.00 0.00 4.02
2957 3098 1.379527 ATCTTCCGCCGAAATTGGTC 58.620 50.000 0.00 0.00 0.00 4.02
2958 3099 2.169769 TCTATCTTCCGCCGAAATTGGT 59.830 45.455 0.00 0.00 0.00 3.67
2959 3100 2.833794 TCTATCTTCCGCCGAAATTGG 58.166 47.619 0.00 0.00 0.00 3.16
2960 3101 5.424121 AAATCTATCTTCCGCCGAAATTG 57.576 39.130 0.00 0.00 0.00 2.32
2961 3102 4.211374 CGAAATCTATCTTCCGCCGAAATT 59.789 41.667 0.00 0.00 0.00 1.82
2962 3103 3.741344 CGAAATCTATCTTCCGCCGAAAT 59.259 43.478 0.00 0.00 0.00 2.17
2963 3104 3.120792 CGAAATCTATCTTCCGCCGAAA 58.879 45.455 0.00 0.00 0.00 3.46
2964 3105 2.739292 CGAAATCTATCTTCCGCCGAA 58.261 47.619 0.00 0.00 0.00 4.30
2965 3106 1.602165 GCGAAATCTATCTTCCGCCGA 60.602 52.381 0.00 0.00 0.00 5.54
2966 3107 0.784778 GCGAAATCTATCTTCCGCCG 59.215 55.000 0.00 0.00 0.00 6.46
2967 3108 1.149148 GGCGAAATCTATCTTCCGCC 58.851 55.000 7.84 7.84 36.26 6.13
2968 3109 1.149148 GGGCGAAATCTATCTTCCGC 58.851 55.000 0.00 0.00 0.00 5.54
2969 3110 2.821991 AGGGCGAAATCTATCTTCCG 57.178 50.000 0.00 0.00 0.00 4.30
2970 3111 3.617775 GCCTAGGGCGAAATCTATCTTCC 60.618 52.174 11.72 0.00 39.62 3.46
2971 3112 3.591023 GCCTAGGGCGAAATCTATCTTC 58.409 50.000 11.72 0.00 39.62 2.87
2972 3113 3.686916 GCCTAGGGCGAAATCTATCTT 57.313 47.619 11.72 0.00 39.62 2.40
2992 3133 3.924238 CGAATTTCGGCCATCTTGG 57.076 52.632 10.95 0.00 41.55 3.61
3002 3143 3.526825 GGATTTCGGCCGAATTTCG 57.473 52.632 38.89 11.81 40.07 3.46
3024 3165 4.033014 GTGTTTTCAATTTCGGCCGAAAAA 59.967 37.500 45.97 35.15 45.60 1.94
3025 3166 3.552294 GTGTTTTCAATTTCGGCCGAAAA 59.448 39.130 45.97 32.24 45.60 2.29
3026 3167 3.117046 GTGTTTTCAATTTCGGCCGAAA 58.883 40.909 44.99 44.99 46.37 3.46
3027 3168 2.099263 TGTGTTTTCAATTTCGGCCGAA 59.901 40.909 35.81 35.81 0.00 4.30
3028 3169 1.676529 TGTGTTTTCAATTTCGGCCGA 59.323 42.857 27.28 27.28 0.00 5.54
3029 3170 2.050691 CTGTGTTTTCAATTTCGGCCG 58.949 47.619 22.12 22.12 0.00 6.13
3030 3171 1.792367 GCTGTGTTTTCAATTTCGGCC 59.208 47.619 0.00 0.00 0.00 6.13
3031 3172 2.742774 AGCTGTGTTTTCAATTTCGGC 58.257 42.857 0.00 0.00 0.00 5.54
3032 3173 4.854399 TGTAGCTGTGTTTTCAATTTCGG 58.146 39.130 0.00 0.00 0.00 4.30
3033 3174 5.747565 TCTGTAGCTGTGTTTTCAATTTCG 58.252 37.500 0.00 0.00 0.00 3.46
3034 3175 9.118236 GTTATCTGTAGCTGTGTTTTCAATTTC 57.882 33.333 0.00 0.00 0.00 2.17
3035 3176 7.803189 CGTTATCTGTAGCTGTGTTTTCAATTT 59.197 33.333 0.00 0.00 0.00 1.82
3036 3177 7.172532 TCGTTATCTGTAGCTGTGTTTTCAATT 59.827 33.333 0.00 0.00 0.00 2.32
3037 3178 6.649141 TCGTTATCTGTAGCTGTGTTTTCAAT 59.351 34.615 0.00 0.00 0.00 2.57
3038 3179 5.986741 TCGTTATCTGTAGCTGTGTTTTCAA 59.013 36.000 0.00 0.00 0.00 2.69
3039 3180 5.534407 TCGTTATCTGTAGCTGTGTTTTCA 58.466 37.500 0.00 0.00 0.00 2.69
3040 3181 6.073980 TGTTCGTTATCTGTAGCTGTGTTTTC 60.074 38.462 0.00 0.00 0.00 2.29
3041 3182 5.756347 TGTTCGTTATCTGTAGCTGTGTTTT 59.244 36.000 0.00 0.00 0.00 2.43
3042 3183 5.294356 TGTTCGTTATCTGTAGCTGTGTTT 58.706 37.500 0.00 0.00 0.00 2.83
3043 3184 4.878439 TGTTCGTTATCTGTAGCTGTGTT 58.122 39.130 0.00 0.00 0.00 3.32
3044 3185 4.514781 TGTTCGTTATCTGTAGCTGTGT 57.485 40.909 0.00 0.00 0.00 3.72
3045 3186 5.839262 TTTGTTCGTTATCTGTAGCTGTG 57.161 39.130 0.00 0.00 0.00 3.66
3046 3187 7.764443 ACATATTTGTTCGTTATCTGTAGCTGT 59.236 33.333 0.00 0.00 29.55 4.40
3047 3188 8.131455 ACATATTTGTTCGTTATCTGTAGCTG 57.869 34.615 0.00 0.00 29.55 4.24
3048 3189 7.979537 TGACATATTTGTTCGTTATCTGTAGCT 59.020 33.333 0.00 0.00 35.79 3.32
3049 3190 8.126871 TGACATATTTGTTCGTTATCTGTAGC 57.873 34.615 0.00 0.00 35.79 3.58
3052 3193 8.779303 TGTTTGACATATTTGTTCGTTATCTGT 58.221 29.630 0.00 0.00 35.79 3.41
3053 3194 9.605955 TTGTTTGACATATTTGTTCGTTATCTG 57.394 29.630 0.00 0.00 35.79 2.90
3088 3229 2.096980 CAGCAGCACGATCATGAAACAT 59.903 45.455 0.00 0.00 0.00 2.71
3610 3760 3.813724 GAGGTGAGTAAAACCAAGACACC 59.186 47.826 0.00 0.00 44.20 4.16
3666 3818 3.622612 TGTGATCGCCATATCAAACACAG 59.377 43.478 3.31 0.00 37.61 3.66
3667 3819 3.373748 GTGTGATCGCCATATCAAACACA 59.626 43.478 3.31 0.00 41.77 3.72
3704 3856 2.094803 TGTTTACCATTGGCGATTGCAG 60.095 45.455 7.38 0.00 45.35 4.41
3804 3956 2.596851 GCAGGGAAGCTGGAGGACA 61.597 63.158 0.00 0.00 0.00 4.02
3815 3967 3.290710 GCAAGAATTCATAGGCAGGGAA 58.709 45.455 8.44 0.00 0.00 3.97
3824 3976 2.701587 CCGCCGGCAAGAATTCATA 58.298 52.632 28.98 0.00 0.00 2.15
3917 4069 1.074775 GGTGTCCCCATTCAGCACA 59.925 57.895 0.00 0.00 33.12 4.57
3991 4143 3.512329 TCAACGGCTAGGATGAACAACTA 59.488 43.478 0.00 0.00 0.00 2.24
4000 4152 1.853963 AGAGTGTCAACGGCTAGGAT 58.146 50.000 0.00 0.00 0.00 3.24
4044 4196 2.507058 CTGACAAAGGATCCCCATCTCA 59.493 50.000 8.55 2.48 33.88 3.27
4106 4258 3.142951 CAAAACAGGACCACGTAATCCA 58.857 45.455 17.19 0.00 37.47 3.41
4117 4269 2.369394 CTGGGGATAGCAAAACAGGAC 58.631 52.381 0.00 0.00 0.00 3.85
4150 4302 2.291365 CAAATCATCCATGGCGTGAGA 58.709 47.619 19.91 4.31 0.00 3.27
4156 4308 1.758280 TGCTTCCAAATCATCCATGGC 59.242 47.619 6.96 0.00 34.13 4.40
4159 4311 3.972133 TCAGTGCTTCCAAATCATCCAT 58.028 40.909 0.00 0.00 0.00 3.41
4293 4445 3.323403 CCAATGTGTTAAAAGAAGGCCCA 59.677 43.478 0.00 0.00 0.00 5.36
4439 4591 5.612351 GAGAGAGTTTTTGGTTACAGTCCT 58.388 41.667 0.00 0.00 0.00 3.85
4451 4603 8.405531 TCATTTCATTGAAACGAGAGAGTTTTT 58.594 29.630 13.80 0.00 43.54 1.94
4463 4615 5.333263 CCTTTGCGGTTCATTTCATTGAAAC 60.333 40.000 13.80 2.49 39.45 2.78
4479 4631 1.164041 AACACGAAGGACCTTTGCGG 61.164 55.000 19.92 14.88 39.35 5.69
4507 4659 7.667219 TGAATTTAGGGGCATATGAGAGATTTC 59.333 37.037 6.97 0.63 0.00 2.17
4508 4660 7.529555 TGAATTTAGGGGCATATGAGAGATTT 58.470 34.615 6.97 0.00 0.00 2.17
4582 4734 5.637387 ACGGCCAAATGACAATTGAAATAAC 59.363 36.000 13.59 0.00 0.00 1.89
4591 4743 1.614996 TCACACGGCCAAATGACAAT 58.385 45.000 2.24 0.00 0.00 2.71
4597 4749 0.400213 TCCTCTTCACACGGCCAAAT 59.600 50.000 2.24 0.00 0.00 2.32
4605 4757 6.016777 ACATGAGAATTTTGTCCTCTTCACAC 60.017 38.462 0.00 0.00 0.00 3.82
4704 4859 5.942961 TCAATTTGTTCTGGTGGGTAACTA 58.057 37.500 0.00 0.00 0.00 2.24
4708 4863 4.447138 ACTCAATTTGTTCTGGTGGGTA 57.553 40.909 0.00 0.00 0.00 3.69
4836 4993 9.066892 ACTCTCAAATGTTAAAAGTAATGCAGA 57.933 29.630 0.00 0.00 0.00 4.26
4849 5006 7.824289 AGCTGCTAACAATACTCTCAAATGTTA 59.176 33.333 0.00 0.00 35.89 2.41
4908 5070 5.297776 CACCAGATTCCCAAGTATGATCAAC 59.702 44.000 0.00 0.00 0.00 3.18
5289 5484 5.895636 TCATACGAAATTGCAAGGTTCAT 57.104 34.783 19.92 11.31 0.00 2.57
5331 5526 5.171476 CACTTGGTATGAGTCGTTCATCTT 58.829 41.667 8.14 0.00 43.03 2.40
5339 5534 0.249120 TGCCCACTTGGTATGAGTCG 59.751 55.000 0.00 0.00 36.04 4.18
5468 5665 6.558009 ACAGCATCATTATTGTTGTGACATC 58.442 36.000 0.00 0.00 37.19 3.06
5482 5679 2.304092 CAGGCATACCACAGCATCATT 58.696 47.619 0.00 0.00 39.06 2.57
5628 5825 0.322456 TTCCATTCAGAGCCCCAACG 60.322 55.000 0.00 0.00 0.00 4.10
5667 5864 3.305398 ACACTAGAGGAAAAGAGTGCG 57.695 47.619 0.00 0.00 42.49 5.34
5719 5916 2.086610 ACCATCCAAAACTTGCACCT 57.913 45.000 0.00 0.00 0.00 4.00
5727 5924 5.065859 CCCAAAACTCAAAACCATCCAAAAC 59.934 40.000 0.00 0.00 0.00 2.43
5943 6140 2.162681 CCAAGTCCAGGACCATTTGAC 58.837 52.381 16.72 0.00 32.18 3.18
6001 6198 5.723672 AAGAAACGACTACCAGATTGAGA 57.276 39.130 0.00 0.00 0.00 3.27
6084 6281 0.895530 CCCCACTACGAGAGAAGCAA 59.104 55.000 0.00 0.00 0.00 3.91
6159 6356 2.358322 AAGGGATGTGGTGAAAACGT 57.642 45.000 0.00 0.00 0.00 3.99
6193 6390 2.158593 TGGGACAATGGTCGAAAAGGAA 60.159 45.455 0.00 0.00 45.28 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.