Multiple sequence alignment - TraesCS6A01G025900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G025900 chr6A 100.000 3383 0 0 1 3383 12893667 12890285 0.000000e+00 6248.0
1 TraesCS6A01G025900 chr6A 93.878 2499 86 26 738 3231 12589450 12591886 0.000000e+00 3705.0
2 TraesCS6A01G025900 chr6A 80.284 2115 263 89 740 2756 12627677 12625619 0.000000e+00 1454.0
3 TraesCS6A01G025900 chr6A 81.451 1833 249 50 977 2756 12857341 12859135 0.000000e+00 1417.0
4 TraesCS6A01G025900 chr6A 81.600 500 78 8 1743 2238 12863535 12864024 5.260000e-108 401.0
5 TraesCS6A01G025900 chr6A 87.059 85 11 0 1743 1827 12623030 12622946 2.780000e-16 97.1
6 TraesCS6A01G025900 chr6B 91.149 2237 138 20 805 3018 21143681 21145880 0.000000e+00 2979.0
7 TraesCS6A01G025900 chr6B 81.296 1481 183 51 740 2148 21210474 21209016 0.000000e+00 1114.0
8 TraesCS6A01G025900 chr6B 86.137 743 75 19 2284 3018 21208773 21208051 0.000000e+00 776.0
9 TraesCS6A01G025900 chr6D 95.736 1759 44 6 1217 2975 11569344 11567617 0.000000e+00 2804.0
10 TraesCS6A01G025900 chr6D 80.568 2218 273 86 634 2756 11359367 11357213 0.000000e+00 1563.0
11 TraesCS6A01G025900 chr6D 79.520 2373 300 109 483 2756 11429838 11432123 0.000000e+00 1519.0
12 TraesCS6A01G025900 chr6D 90.411 803 41 11 874 1659 11324612 11325395 0.000000e+00 1024.0
13 TraesCS6A01G025900 chr6D 94.435 611 31 3 2623 3231 11335913 11336522 0.000000e+00 937.0
14 TraesCS6A01G025900 chr6D 94.434 539 28 1 1653 2189 11333607 11334145 0.000000e+00 828.0
15 TraesCS6A01G025900 chr6D 92.308 416 24 5 2973 3383 11565902 11565490 4.860000e-163 584.0
16 TraesCS6A01G025900 chr6D 89.770 391 12 6 2244 2634 11334154 11334516 3.050000e-130 475.0
17 TraesCS6A01G025900 chr6D 81.854 507 77 11 1745 2245 11434553 11435050 2.430000e-111 412.0
18 TraesCS6A01G025900 chr1D 75.084 1192 213 48 991 2120 485737461 485736292 2.360000e-131 479.0
19 TraesCS6A01G025900 chr7A 100.000 56 0 0 1 56 651089756 651089811 1.660000e-18 104.0
20 TraesCS6A01G025900 chr7A 98.214 56 1 0 1 56 240348982 240349037 7.730000e-17 99.0
21 TraesCS6A01G025900 chr7A 94.643 56 3 0 1 56 616431470 616431415 1.670000e-13 87.9
22 TraesCS6A01G025900 chr3A 93.846 65 4 0 1 65 437461138 437461074 7.730000e-17 99.0
23 TraesCS6A01G025900 chr3A 92.593 54 4 0 3 56 712956116 712956169 1.010000e-10 78.7
24 TraesCS6A01G025900 chr1A 94.737 57 3 0 1 57 393303079 393303023 4.650000e-14 89.8
25 TraesCS6A01G025900 chr2A 94.643 56 3 0 1 56 362133034 362133089 1.670000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G025900 chr6A 12890285 12893667 3382 True 6248.000000 6248 100.000000 1 3383 1 chr6A.!!$R1 3382
1 TraesCS6A01G025900 chr6A 12589450 12591886 2436 False 3705.000000 3705 93.878000 738 3231 1 chr6A.!!$F1 2493
2 TraesCS6A01G025900 chr6A 12857341 12859135 1794 False 1417.000000 1417 81.451000 977 2756 1 chr6A.!!$F2 1779
3 TraesCS6A01G025900 chr6A 12622946 12627677 4731 True 775.550000 1454 83.671500 740 2756 2 chr6A.!!$R2 2016
4 TraesCS6A01G025900 chr6B 21143681 21145880 2199 False 2979.000000 2979 91.149000 805 3018 1 chr6B.!!$F1 2213
5 TraesCS6A01G025900 chr6B 21208051 21210474 2423 True 945.000000 1114 83.716500 740 3018 2 chr6B.!!$R1 2278
6 TraesCS6A01G025900 chr6D 11565490 11569344 3854 True 1694.000000 2804 94.022000 1217 3383 2 chr6D.!!$R2 2166
7 TraesCS6A01G025900 chr6D 11357213 11359367 2154 True 1563.000000 1563 80.568000 634 2756 1 chr6D.!!$R1 2122
8 TraesCS6A01G025900 chr6D 11324612 11325395 783 False 1024.000000 1024 90.411000 874 1659 1 chr6D.!!$F1 785
9 TraesCS6A01G025900 chr6D 11429838 11435050 5212 False 965.500000 1519 80.687000 483 2756 2 chr6D.!!$F3 2273
10 TraesCS6A01G025900 chr6D 11333607 11336522 2915 False 746.666667 937 92.879667 1653 3231 3 chr6D.!!$F2 1578
11 TraesCS6A01G025900 chr1D 485736292 485737461 1169 True 479.000000 479 75.084000 991 2120 1 chr1D.!!$R1 1129

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
357 358 0.032316 TCTCTCTCTGCAGCCATCCT 60.032 55.0 9.47 0.0 0.00 3.24 F
572 573 0.035881 CATAGGCTGGTGGCATCGAT 59.964 55.0 0.00 0.0 44.01 3.59 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1841 2020 1.968017 AGCACCCATGTCGCAACAG 60.968 57.895 0.0 0.0 39.2 3.16 R
2509 2855 0.859232 CAAACACGAGACCAGAACCG 59.141 55.000 0.0 0.0 0.0 4.44 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 2.034221 GCCTTCTCCCGGCAGTTT 59.966 61.111 0.00 0.00 46.77 2.66
24 25 2.041115 GCCTTCTCCCGGCAGTTTC 61.041 63.158 0.00 0.00 46.77 2.78
25 26 1.679898 CCTTCTCCCGGCAGTTTCT 59.320 57.895 0.00 0.00 0.00 2.52
26 27 0.391793 CCTTCTCCCGGCAGTTTCTC 60.392 60.000 0.00 0.00 0.00 2.87
27 28 0.610687 CTTCTCCCGGCAGTTTCTCT 59.389 55.000 0.00 0.00 0.00 3.10
28 29 0.321671 TTCTCCCGGCAGTTTCTCTG 59.678 55.000 0.00 0.00 46.12 3.35
29 30 0.832135 TCTCCCGGCAGTTTCTCTGT 60.832 55.000 0.00 0.00 45.23 3.41
30 31 0.390472 CTCCCGGCAGTTTCTCTGTC 60.390 60.000 0.00 0.00 45.23 3.51
31 32 1.376037 CCCGGCAGTTTCTCTGTCC 60.376 63.158 0.00 0.00 45.05 4.02
32 33 1.674057 CCGGCAGTTTCTCTGTCCT 59.326 57.895 0.00 0.00 45.05 3.85
33 34 0.035458 CCGGCAGTTTCTCTGTCCTT 59.965 55.000 0.00 0.00 45.05 3.36
34 35 1.275291 CCGGCAGTTTCTCTGTCCTTA 59.725 52.381 0.00 0.00 45.05 2.69
35 36 2.338500 CGGCAGTTTCTCTGTCCTTAC 58.662 52.381 0.00 0.00 45.05 2.34
36 37 2.288825 CGGCAGTTTCTCTGTCCTTACA 60.289 50.000 0.00 0.00 45.05 2.41
37 38 3.617531 CGGCAGTTTCTCTGTCCTTACAT 60.618 47.826 0.00 0.00 45.05 2.29
38 39 4.327680 GGCAGTTTCTCTGTCCTTACATT 58.672 43.478 0.00 0.00 45.23 2.71
39 40 5.488341 GGCAGTTTCTCTGTCCTTACATTA 58.512 41.667 0.00 0.00 45.23 1.90
40 41 5.582665 GGCAGTTTCTCTGTCCTTACATTAG 59.417 44.000 0.00 0.00 45.23 1.73
41 42 6.166982 GCAGTTTCTCTGTCCTTACATTAGT 58.833 40.000 0.00 0.00 45.23 2.24
42 43 6.091441 GCAGTTTCTCTGTCCTTACATTAGTG 59.909 42.308 0.00 0.00 45.23 2.74
43 44 7.155328 CAGTTTCTCTGTCCTTACATTAGTGT 58.845 38.462 0.00 0.00 39.46 3.55
44 45 7.657761 CAGTTTCTCTGTCCTTACATTAGTGTT 59.342 37.037 0.00 0.00 38.24 3.32
45 46 7.657761 AGTTTCTCTGTCCTTACATTAGTGTTG 59.342 37.037 0.00 0.00 39.77 3.33
46 47 6.665992 TCTCTGTCCTTACATTAGTGTTGT 57.334 37.500 0.00 0.00 39.77 3.32
47 48 6.455647 TCTCTGTCCTTACATTAGTGTTGTG 58.544 40.000 0.00 0.00 39.77 3.33
48 49 5.547465 TCTGTCCTTACATTAGTGTTGTGG 58.453 41.667 0.00 0.00 39.77 4.17
49 50 5.071250 TCTGTCCTTACATTAGTGTTGTGGT 59.929 40.000 0.00 0.00 39.77 4.16
50 51 5.060506 TGTCCTTACATTAGTGTTGTGGTG 58.939 41.667 0.00 0.00 39.77 4.17
51 52 5.061179 GTCCTTACATTAGTGTTGTGGTGT 58.939 41.667 0.00 0.00 39.77 4.16
52 53 6.183360 TGTCCTTACATTAGTGTTGTGGTGTA 60.183 38.462 0.00 0.00 39.77 2.90
53 54 6.367969 GTCCTTACATTAGTGTTGTGGTGTAG 59.632 42.308 0.00 0.00 39.77 2.74
54 55 6.042322 TCCTTACATTAGTGTTGTGGTGTAGT 59.958 38.462 0.00 0.00 39.77 2.73
55 56 6.147164 CCTTACATTAGTGTTGTGGTGTAGTG 59.853 42.308 0.00 0.00 39.77 2.74
56 57 5.031066 ACATTAGTGTTGTGGTGTAGTGT 57.969 39.130 0.00 0.00 34.01 3.55
57 58 4.814234 ACATTAGTGTTGTGGTGTAGTGTG 59.186 41.667 0.00 0.00 34.01 3.82
58 59 1.663695 AGTGTTGTGGTGTAGTGTGC 58.336 50.000 0.00 0.00 0.00 4.57
59 60 0.303493 GTGTTGTGGTGTAGTGTGCG 59.697 55.000 0.00 0.00 0.00 5.34
60 61 0.108089 TGTTGTGGTGTAGTGTGCGT 60.108 50.000 0.00 0.00 0.00 5.24
61 62 1.011333 GTTGTGGTGTAGTGTGCGTT 58.989 50.000 0.00 0.00 0.00 4.84
62 63 1.004292 GTTGTGGTGTAGTGTGCGTTC 60.004 52.381 0.00 0.00 0.00 3.95
63 64 0.175989 TGTGGTGTAGTGTGCGTTCA 59.824 50.000 0.00 0.00 0.00 3.18
64 65 0.580104 GTGGTGTAGTGTGCGTTCAC 59.420 55.000 4.43 4.43 43.40 3.18
66 67 1.137513 GGTGTAGTGTGCGTTCACTC 58.862 55.000 15.45 3.12 45.79 3.51
67 68 1.137513 GTGTAGTGTGCGTTCACTCC 58.862 55.000 15.45 7.56 45.79 3.85
68 69 0.032952 TGTAGTGTGCGTTCACTCCC 59.967 55.000 15.45 9.86 45.79 4.30
69 70 0.032952 GTAGTGTGCGTTCACTCCCA 59.967 55.000 15.45 0.03 45.79 4.37
70 71 0.753867 TAGTGTGCGTTCACTCCCAA 59.246 50.000 15.45 0.00 45.79 4.12
71 72 0.532862 AGTGTGCGTTCACTCCCAAG 60.533 55.000 8.39 0.00 44.07 3.61
72 73 0.814010 GTGTGCGTTCACTCCCAAGT 60.814 55.000 5.20 0.00 43.49 3.16
73 74 0.531974 TGTGCGTTCACTCCCAAGTC 60.532 55.000 0.00 0.00 43.49 3.01
74 75 0.531974 GTGCGTTCACTCCCAAGTCA 60.532 55.000 0.00 0.00 40.03 3.41
75 76 0.396435 TGCGTTCACTCCCAAGTCAT 59.604 50.000 0.00 0.00 31.71 3.06
76 77 1.202758 TGCGTTCACTCCCAAGTCATT 60.203 47.619 0.00 0.00 31.71 2.57
77 78 1.464997 GCGTTCACTCCCAAGTCATTC 59.535 52.381 0.00 0.00 31.71 2.67
78 79 2.076863 CGTTCACTCCCAAGTCATTCC 58.923 52.381 0.00 0.00 31.71 3.01
79 80 2.549992 CGTTCACTCCCAAGTCATTCCA 60.550 50.000 0.00 0.00 31.71 3.53
80 81 3.690460 GTTCACTCCCAAGTCATTCCAT 58.310 45.455 0.00 0.00 31.71 3.41
81 82 4.082125 GTTCACTCCCAAGTCATTCCATT 58.918 43.478 0.00 0.00 31.71 3.16
82 83 3.689347 TCACTCCCAAGTCATTCCATTG 58.311 45.455 0.00 0.00 31.71 2.82
83 84 2.756760 CACTCCCAAGTCATTCCATTGG 59.243 50.000 0.00 0.00 42.59 3.16
84 85 2.379907 ACTCCCAAGTCATTCCATTGGT 59.620 45.455 1.86 0.00 41.60 3.67
85 86 3.591527 ACTCCCAAGTCATTCCATTGGTA 59.408 43.478 1.86 0.00 41.60 3.25
86 87 4.202441 CTCCCAAGTCATTCCATTGGTAG 58.798 47.826 1.86 0.00 41.60 3.18
87 88 2.689983 CCCAAGTCATTCCATTGGTAGC 59.310 50.000 1.86 0.00 41.60 3.58
88 89 3.624777 CCAAGTCATTCCATTGGTAGCT 58.375 45.455 1.86 0.00 38.92 3.32
89 90 4.019174 CCAAGTCATTCCATTGGTAGCTT 58.981 43.478 1.86 0.00 38.92 3.74
90 91 4.463891 CCAAGTCATTCCATTGGTAGCTTT 59.536 41.667 1.86 0.00 38.92 3.51
91 92 5.047092 CCAAGTCATTCCATTGGTAGCTTTT 60.047 40.000 1.86 0.00 38.92 2.27
92 93 6.458210 CAAGTCATTCCATTGGTAGCTTTTT 58.542 36.000 1.86 0.00 0.00 1.94
118 119 8.677148 TTTCTTTTCATGTATGTCTATAGCCC 57.323 34.615 0.00 0.00 0.00 5.19
119 120 7.373617 TCTTTTCATGTATGTCTATAGCCCA 57.626 36.000 0.00 0.00 0.00 5.36
120 121 7.801104 TCTTTTCATGTATGTCTATAGCCCAA 58.199 34.615 0.00 0.00 0.00 4.12
121 122 8.271458 TCTTTTCATGTATGTCTATAGCCCAAA 58.729 33.333 0.00 0.00 0.00 3.28
122 123 7.801716 TTTCATGTATGTCTATAGCCCAAAC 57.198 36.000 0.00 0.00 0.00 2.93
123 124 5.538118 TCATGTATGTCTATAGCCCAAACG 58.462 41.667 0.00 0.00 0.00 3.60
124 125 5.303333 TCATGTATGTCTATAGCCCAAACGA 59.697 40.000 0.00 0.00 0.00 3.85
125 126 5.601583 TGTATGTCTATAGCCCAAACGAA 57.398 39.130 0.00 0.00 0.00 3.85
126 127 5.353938 TGTATGTCTATAGCCCAAACGAAC 58.646 41.667 0.00 0.00 0.00 3.95
127 128 3.255969 TGTCTATAGCCCAAACGAACC 57.744 47.619 0.00 0.00 0.00 3.62
128 129 2.835764 TGTCTATAGCCCAAACGAACCT 59.164 45.455 0.00 0.00 0.00 3.50
129 130 3.262405 TGTCTATAGCCCAAACGAACCTT 59.738 43.478 0.00 0.00 0.00 3.50
130 131 4.467082 TGTCTATAGCCCAAACGAACCTTA 59.533 41.667 0.00 0.00 0.00 2.69
131 132 5.129815 TGTCTATAGCCCAAACGAACCTTAT 59.870 40.000 0.00 0.00 0.00 1.73
132 133 6.324512 TGTCTATAGCCCAAACGAACCTTATA 59.675 38.462 0.00 0.00 0.00 0.98
133 134 6.867293 GTCTATAGCCCAAACGAACCTTATAG 59.133 42.308 0.00 0.00 0.00 1.31
134 135 5.881923 ATAGCCCAAACGAACCTTATAGA 57.118 39.130 0.00 0.00 0.00 1.98
135 136 3.870274 AGCCCAAACGAACCTTATAGAC 58.130 45.455 0.00 0.00 0.00 2.59
136 137 3.262405 AGCCCAAACGAACCTTATAGACA 59.738 43.478 0.00 0.00 0.00 3.41
137 138 3.373130 GCCCAAACGAACCTTATAGACAC 59.627 47.826 0.00 0.00 0.00 3.67
138 139 4.571919 CCCAAACGAACCTTATAGACACA 58.428 43.478 0.00 0.00 0.00 3.72
139 140 4.390909 CCCAAACGAACCTTATAGACACAC 59.609 45.833 0.00 0.00 0.00 3.82
140 141 4.992319 CCAAACGAACCTTATAGACACACA 59.008 41.667 0.00 0.00 0.00 3.72
141 142 5.467399 CCAAACGAACCTTATAGACACACAA 59.533 40.000 0.00 0.00 0.00 3.33
142 143 6.017770 CCAAACGAACCTTATAGACACACAAA 60.018 38.462 0.00 0.00 0.00 2.83
143 144 6.780706 AACGAACCTTATAGACACACAAAG 57.219 37.500 0.00 0.00 0.00 2.77
144 145 6.092955 ACGAACCTTATAGACACACAAAGA 57.907 37.500 0.00 0.00 0.00 2.52
145 146 6.518493 ACGAACCTTATAGACACACAAAGAA 58.482 36.000 0.00 0.00 0.00 2.52
146 147 6.987992 ACGAACCTTATAGACACACAAAGAAA 59.012 34.615 0.00 0.00 0.00 2.52
147 148 7.496591 ACGAACCTTATAGACACACAAAGAAAA 59.503 33.333 0.00 0.00 0.00 2.29
148 149 8.009974 CGAACCTTATAGACACACAAAGAAAAG 58.990 37.037 0.00 0.00 0.00 2.27
149 150 7.745620 ACCTTATAGACACACAAAGAAAAGG 57.254 36.000 0.00 0.00 36.64 3.11
150 151 7.514721 ACCTTATAGACACACAAAGAAAAGGA 58.485 34.615 0.00 0.00 35.02 3.36
151 152 7.996644 ACCTTATAGACACACAAAGAAAAGGAA 59.003 33.333 0.00 0.00 35.02 3.36
152 153 8.846211 CCTTATAGACACACAAAGAAAAGGAAA 58.154 33.333 0.00 0.00 33.20 3.13
153 154 9.884465 CTTATAGACACACAAAGAAAAGGAAAG 57.116 33.333 0.00 0.00 0.00 2.62
154 155 9.621629 TTATAGACACACAAAGAAAAGGAAAGA 57.378 29.630 0.00 0.00 0.00 2.52
155 156 6.442513 AGACACACAAAGAAAAGGAAAGAG 57.557 37.500 0.00 0.00 0.00 2.85
156 157 5.946377 AGACACACAAAGAAAAGGAAAGAGT 59.054 36.000 0.00 0.00 0.00 3.24
157 158 6.094186 AGACACACAAAGAAAAGGAAAGAGTC 59.906 38.462 0.00 0.00 0.00 3.36
166 167 3.534721 GGAAAGAGTCCCGTTCCTG 57.465 57.895 9.56 0.00 45.96 3.86
167 168 0.673956 GGAAAGAGTCCCGTTCCTGC 60.674 60.000 9.56 0.00 45.96 4.85
168 169 0.673956 GAAAGAGTCCCGTTCCTGCC 60.674 60.000 0.00 0.00 0.00 4.85
169 170 1.415672 AAAGAGTCCCGTTCCTGCCA 61.416 55.000 0.00 0.00 0.00 4.92
170 171 2.047179 GAGTCCCGTTCCTGCCAC 60.047 66.667 0.00 0.00 0.00 5.01
171 172 3.607370 GAGTCCCGTTCCTGCCACC 62.607 68.421 0.00 0.00 0.00 4.61
172 173 4.717313 GTCCCGTTCCTGCCACCC 62.717 72.222 0.00 0.00 0.00 4.61
188 189 4.537260 CCCCCACTTCCATTGCAA 57.463 55.556 0.00 0.00 0.00 4.08
189 190 2.995480 CCCCCACTTCCATTGCAAT 58.005 52.632 5.99 5.99 0.00 3.56
190 191 2.157640 CCCCCACTTCCATTGCAATA 57.842 50.000 12.53 0.00 0.00 1.90
191 192 1.756538 CCCCCACTTCCATTGCAATAC 59.243 52.381 12.53 0.00 0.00 1.89
192 193 1.756538 CCCCACTTCCATTGCAATACC 59.243 52.381 12.53 0.00 0.00 2.73
193 194 1.756538 CCCACTTCCATTGCAATACCC 59.243 52.381 12.53 0.00 0.00 3.69
194 195 2.624029 CCCACTTCCATTGCAATACCCT 60.624 50.000 12.53 0.00 0.00 4.34
195 196 3.372566 CCCACTTCCATTGCAATACCCTA 60.373 47.826 12.53 0.00 0.00 3.53
196 197 4.277476 CCACTTCCATTGCAATACCCTAA 58.723 43.478 12.53 1.76 0.00 2.69
197 198 4.709397 CCACTTCCATTGCAATACCCTAAA 59.291 41.667 12.53 0.11 0.00 1.85
198 199 5.186797 CCACTTCCATTGCAATACCCTAAAA 59.813 40.000 12.53 0.00 0.00 1.52
199 200 6.295575 CCACTTCCATTGCAATACCCTAAAAA 60.296 38.462 12.53 0.00 0.00 1.94
214 215 2.267045 AAAAACAGGCTCGCATCCC 58.733 52.632 0.00 0.00 0.00 3.85
215 216 0.251341 AAAAACAGGCTCGCATCCCT 60.251 50.000 0.00 0.00 0.00 4.20
216 217 0.618458 AAAACAGGCTCGCATCCCTA 59.382 50.000 0.00 0.00 0.00 3.53
217 218 0.839946 AAACAGGCTCGCATCCCTAT 59.160 50.000 0.00 0.00 0.00 2.57
218 219 0.839946 AACAGGCTCGCATCCCTATT 59.160 50.000 0.00 0.00 0.00 1.73
219 220 0.394565 ACAGGCTCGCATCCCTATTC 59.605 55.000 0.00 0.00 0.00 1.75
220 221 0.321122 CAGGCTCGCATCCCTATTCC 60.321 60.000 0.00 0.00 0.00 3.01
221 222 0.764369 AGGCTCGCATCCCTATTCCA 60.764 55.000 0.00 0.00 0.00 3.53
222 223 0.326264 GGCTCGCATCCCTATTCCAT 59.674 55.000 0.00 0.00 0.00 3.41
223 224 1.271597 GGCTCGCATCCCTATTCCATT 60.272 52.381 0.00 0.00 0.00 3.16
224 225 2.079925 GCTCGCATCCCTATTCCATTC 58.920 52.381 0.00 0.00 0.00 2.67
225 226 2.704572 CTCGCATCCCTATTCCATTCC 58.295 52.381 0.00 0.00 0.00 3.01
226 227 2.038952 CTCGCATCCCTATTCCATTCCA 59.961 50.000 0.00 0.00 0.00 3.53
227 228 2.154462 CGCATCCCTATTCCATTCCAC 58.846 52.381 0.00 0.00 0.00 4.02
228 229 2.487086 CGCATCCCTATTCCATTCCACA 60.487 50.000 0.00 0.00 0.00 4.17
229 230 2.887152 GCATCCCTATTCCATTCCACAC 59.113 50.000 0.00 0.00 0.00 3.82
230 231 3.141398 CATCCCTATTCCATTCCACACG 58.859 50.000 0.00 0.00 0.00 4.49
231 232 1.488812 TCCCTATTCCATTCCACACGG 59.511 52.381 0.00 0.00 0.00 4.94
232 233 1.476833 CCCTATTCCATTCCACACGGG 60.477 57.143 0.00 0.00 38.37 5.28
233 234 1.211949 CCTATTCCATTCCACACGGGT 59.788 52.381 0.00 0.00 38.11 5.28
234 235 2.436542 CCTATTCCATTCCACACGGGTA 59.563 50.000 0.00 0.00 38.11 3.69
235 236 3.118186 CCTATTCCATTCCACACGGGTAA 60.118 47.826 0.00 0.00 38.11 2.85
236 237 2.188062 TTCCATTCCACACGGGTAAC 57.812 50.000 0.00 0.00 38.11 2.50
237 238 1.057471 TCCATTCCACACGGGTAACA 58.943 50.000 0.00 0.00 38.11 2.41
238 239 1.631388 TCCATTCCACACGGGTAACAT 59.369 47.619 0.00 0.00 38.11 2.71
239 240 2.014128 CCATTCCACACGGGTAACATC 58.986 52.381 0.00 0.00 38.11 3.06
240 241 1.663643 CATTCCACACGGGTAACATCG 59.336 52.381 0.00 0.00 38.11 3.84
241 242 0.037139 TTCCACACGGGTAACATCGG 60.037 55.000 0.00 0.00 38.11 4.18
242 243 2.104253 CCACACGGGTAACATCGGC 61.104 63.158 0.00 0.00 39.74 5.54
243 244 2.125832 ACACGGGTAACATCGGCG 60.126 61.111 0.00 0.00 39.74 6.46
244 245 2.888534 CACGGGTAACATCGGCGG 60.889 66.667 7.21 0.00 39.74 6.13
245 246 3.384532 ACGGGTAACATCGGCGGT 61.385 61.111 7.21 0.00 39.74 5.68
246 247 2.584143 CGGGTAACATCGGCGGTC 60.584 66.667 7.21 0.00 39.74 4.79
247 248 2.580276 GGGTAACATCGGCGGTCA 59.420 61.111 7.21 0.00 39.74 4.02
248 249 1.520787 GGGTAACATCGGCGGTCAG 60.521 63.158 7.21 0.00 39.74 3.51
249 250 1.514087 GGTAACATCGGCGGTCAGA 59.486 57.895 7.21 0.00 0.00 3.27
250 251 0.104304 GGTAACATCGGCGGTCAGAT 59.896 55.000 7.21 0.00 0.00 2.90
251 252 1.209128 GTAACATCGGCGGTCAGATG 58.791 55.000 7.21 5.42 46.95 2.90
252 253 1.107945 TAACATCGGCGGTCAGATGA 58.892 50.000 17.01 0.00 45.08 2.92
253 254 0.460284 AACATCGGCGGTCAGATGAC 60.460 55.000 17.01 4.33 45.08 3.06
261 262 4.035843 GTCAGATGACCCCCGACT 57.964 61.111 1.33 0.00 39.07 4.18
262 263 3.202548 GTCAGATGACCCCCGACTA 57.797 57.895 1.33 0.00 39.07 2.59
263 264 1.705873 GTCAGATGACCCCCGACTAT 58.294 55.000 1.33 0.00 39.07 2.12
264 265 1.341531 GTCAGATGACCCCCGACTATG 59.658 57.143 1.33 0.00 39.07 2.23
265 266 0.681733 CAGATGACCCCCGACTATGG 59.318 60.000 0.00 0.00 0.00 2.74
266 267 1.122019 AGATGACCCCCGACTATGGC 61.122 60.000 0.00 0.00 0.00 4.40
267 268 2.113243 GATGACCCCCGACTATGGCC 62.113 65.000 0.00 0.00 0.00 5.36
268 269 2.766651 GACCCCCGACTATGGCCA 60.767 66.667 8.56 8.56 0.00 5.36
269 270 3.087906 ACCCCCGACTATGGCCAC 61.088 66.667 8.16 0.00 0.00 5.01
270 271 3.873812 CCCCCGACTATGGCCACC 61.874 72.222 8.16 0.00 0.00 4.61
271 272 4.235762 CCCCGACTATGGCCACCG 62.236 72.222 8.16 9.77 0.00 4.94
272 273 4.910585 CCCGACTATGGCCACCGC 62.911 72.222 8.16 0.00 0.00 5.68
273 274 4.155733 CCGACTATGGCCACCGCA 62.156 66.667 8.16 0.00 36.38 5.69
274 275 2.586079 CGACTATGGCCACCGCAG 60.586 66.667 8.16 5.69 36.38 5.18
275 276 2.584608 GACTATGGCCACCGCAGT 59.415 61.111 8.16 9.44 36.38 4.40
276 277 1.078426 GACTATGGCCACCGCAGTT 60.078 57.895 8.16 0.00 36.38 3.16
277 278 1.078426 ACTATGGCCACCGCAGTTC 60.078 57.895 8.16 0.00 36.38 3.01
278 279 2.125310 TATGGCCACCGCAGTTCG 60.125 61.111 8.16 0.00 36.38 3.95
279 280 2.852495 CTATGGCCACCGCAGTTCGT 62.852 60.000 8.16 0.00 36.38 3.85
280 281 2.845752 TATGGCCACCGCAGTTCGTC 62.846 60.000 8.16 0.00 36.38 4.20
286 287 4.657824 CCGCAGTTCGTCGGTGGT 62.658 66.667 0.00 0.00 40.72 4.16
287 288 2.660552 CGCAGTTCGTCGGTGGTT 60.661 61.111 0.00 0.00 0.00 3.67
288 289 1.372004 CGCAGTTCGTCGGTGGTTA 60.372 57.895 0.00 0.00 0.00 2.85
289 290 0.734942 CGCAGTTCGTCGGTGGTTAT 60.735 55.000 0.00 0.00 0.00 1.89
290 291 1.467883 CGCAGTTCGTCGGTGGTTATA 60.468 52.381 0.00 0.00 0.00 0.98
291 292 2.190981 GCAGTTCGTCGGTGGTTATAG 58.809 52.381 0.00 0.00 0.00 1.31
292 293 2.190981 CAGTTCGTCGGTGGTTATAGC 58.809 52.381 0.00 0.00 0.00 2.97
293 294 1.194495 GTTCGTCGGTGGTTATAGCG 58.806 55.000 0.00 0.00 42.44 4.26
294 295 0.101040 TTCGTCGGTGGTTATAGCGG 59.899 55.000 0.00 0.00 41.49 5.52
295 296 1.947642 CGTCGGTGGTTATAGCGGC 60.948 63.158 0.00 0.00 42.16 6.53
296 297 1.947642 GTCGGTGGTTATAGCGGCG 60.948 63.158 0.51 0.51 41.49 6.46
297 298 2.105528 CGGTGGTTATAGCGGCGT 59.894 61.111 9.37 0.00 37.86 5.68
298 299 1.947642 CGGTGGTTATAGCGGCGTC 60.948 63.158 9.37 0.13 37.86 5.19
299 300 1.947642 GGTGGTTATAGCGGCGTCG 60.948 63.158 4.29 4.29 39.81 5.12
310 311 3.838271 GGCGTCGCTGGAGGATGA 61.838 66.667 18.11 0.00 0.00 2.92
311 312 2.184322 GCGTCGCTGGAGGATGAA 59.816 61.111 10.68 0.00 0.00 2.57
312 313 1.447838 GCGTCGCTGGAGGATGAAA 60.448 57.895 10.68 0.00 0.00 2.69
313 314 1.019278 GCGTCGCTGGAGGATGAAAA 61.019 55.000 10.68 0.00 0.00 2.29
314 315 0.721718 CGTCGCTGGAGGATGAAAAC 59.278 55.000 0.00 0.00 0.00 2.43
315 316 0.721718 GTCGCTGGAGGATGAAAACG 59.278 55.000 0.00 0.00 0.00 3.60
316 317 0.320374 TCGCTGGAGGATGAAAACGT 59.680 50.000 0.00 0.00 0.00 3.99
317 318 0.721718 CGCTGGAGGATGAAAACGTC 59.278 55.000 0.00 0.00 0.00 4.34
318 319 1.087501 GCTGGAGGATGAAAACGTCC 58.912 55.000 0.00 0.00 43.10 4.79
322 323 3.834732 AGGATGAAAACGTCCTCGG 57.165 52.632 5.31 0.00 40.87 4.63
323 324 0.974383 AGGATGAAAACGTCCTCGGT 59.026 50.000 5.31 0.00 40.87 4.69
324 325 1.076332 GGATGAAAACGTCCTCGGTG 58.924 55.000 0.00 0.00 41.85 4.94
325 326 1.337447 GGATGAAAACGTCCTCGGTGA 60.337 52.381 0.00 0.00 41.85 4.02
326 327 1.993370 GATGAAAACGTCCTCGGTGAG 59.007 52.381 0.00 0.00 41.85 3.51
334 335 2.989824 CCTCGGTGAGGTCCACGT 60.990 66.667 4.65 0.00 46.62 4.49
335 336 2.567049 CTCGGTGAGGTCCACGTC 59.433 66.667 0.00 0.00 46.62 4.34
336 337 2.987547 TCGGTGAGGTCCACGTCC 60.988 66.667 0.00 0.00 46.62 4.79
337 338 3.299977 CGGTGAGGTCCACGTCCA 61.300 66.667 0.00 0.00 46.62 4.02
338 339 2.646175 CGGTGAGGTCCACGTCCAT 61.646 63.158 0.00 0.00 46.62 3.41
339 340 1.218316 GGTGAGGTCCACGTCCATC 59.782 63.158 0.00 0.00 46.62 3.51
340 341 1.258445 GGTGAGGTCCACGTCCATCT 61.258 60.000 0.00 0.00 46.62 2.90
341 342 0.173708 GTGAGGTCCACGTCCATCTC 59.826 60.000 0.00 0.00 35.86 2.75
342 343 0.039764 TGAGGTCCACGTCCATCTCT 59.960 55.000 5.37 0.00 0.00 3.10
343 344 0.741915 GAGGTCCACGTCCATCTCTC 59.258 60.000 0.00 0.00 0.00 3.20
344 345 0.333312 AGGTCCACGTCCATCTCTCT 59.667 55.000 0.00 0.00 0.00 3.10
345 346 0.741915 GGTCCACGTCCATCTCTCTC 59.258 60.000 0.00 0.00 0.00 3.20
346 347 1.683629 GGTCCACGTCCATCTCTCTCT 60.684 57.143 0.00 0.00 0.00 3.10
347 348 1.403679 GTCCACGTCCATCTCTCTCTG 59.596 57.143 0.00 0.00 0.00 3.35
348 349 0.102120 CCACGTCCATCTCTCTCTGC 59.898 60.000 0.00 0.00 0.00 4.26
349 350 0.813821 CACGTCCATCTCTCTCTGCA 59.186 55.000 0.00 0.00 0.00 4.41
350 351 1.102154 ACGTCCATCTCTCTCTGCAG 58.898 55.000 7.63 7.63 0.00 4.41
351 352 0.248990 CGTCCATCTCTCTCTGCAGC 60.249 60.000 9.47 0.00 0.00 5.25
352 353 0.104671 GTCCATCTCTCTCTGCAGCC 59.895 60.000 9.47 0.00 0.00 4.85
353 354 0.325016 TCCATCTCTCTCTGCAGCCA 60.325 55.000 9.47 0.00 0.00 4.75
354 355 0.759959 CCATCTCTCTCTGCAGCCAT 59.240 55.000 9.47 0.00 0.00 4.40
355 356 1.270412 CCATCTCTCTCTGCAGCCATC 60.270 57.143 9.47 0.00 0.00 3.51
356 357 1.050204 ATCTCTCTCTGCAGCCATCC 58.950 55.000 9.47 0.00 0.00 3.51
357 358 0.032316 TCTCTCTCTGCAGCCATCCT 60.032 55.000 9.47 0.00 0.00 3.24
358 359 0.390124 CTCTCTCTGCAGCCATCCTC 59.610 60.000 9.47 0.00 0.00 3.71
359 360 1.047596 TCTCTCTGCAGCCATCCTCC 61.048 60.000 9.47 0.00 0.00 4.30
360 361 2.042404 CTCTCTGCAGCCATCCTCCC 62.042 65.000 9.47 0.00 0.00 4.30
361 362 2.041762 TCTGCAGCCATCCTCCCT 59.958 61.111 9.47 0.00 0.00 4.20
362 363 2.042404 CTCTGCAGCCATCCTCCCTC 62.042 65.000 9.47 0.00 0.00 4.30
363 364 3.092511 TGCAGCCATCCTCCCTCC 61.093 66.667 0.00 0.00 0.00 4.30
364 365 2.771762 GCAGCCATCCTCCCTCCT 60.772 66.667 0.00 0.00 0.00 3.69
365 366 3.117452 GCAGCCATCCTCCCTCCTG 62.117 68.421 0.00 0.00 0.00 3.86
366 367 2.771762 AGCCATCCTCCCTCCTGC 60.772 66.667 0.00 0.00 0.00 4.85
367 368 3.883549 GCCATCCTCCCTCCTGCC 61.884 72.222 0.00 0.00 0.00 4.85
368 369 3.174265 CCATCCTCCCTCCTGCCC 61.174 72.222 0.00 0.00 0.00 5.36
369 370 2.367377 CATCCTCCCTCCTGCCCA 60.367 66.667 0.00 0.00 0.00 5.36
370 371 2.367512 ATCCTCCCTCCTGCCCAC 60.368 66.667 0.00 0.00 0.00 4.61
373 374 3.775654 CTCCCTCCTGCCCACGAC 61.776 72.222 0.00 0.00 0.00 4.34
376 377 4.135153 CCTCCTGCCCACGACGAG 62.135 72.222 0.00 0.00 0.00 4.18
377 378 4.135153 CTCCTGCCCACGACGAGG 62.135 72.222 0.00 2.17 0.00 4.63
383 384 4.436998 CCCACGACGAGGCAGGAC 62.437 72.222 5.72 0.00 0.00 3.85
384 385 3.680786 CCACGACGAGGCAGGACA 61.681 66.667 0.00 0.00 0.00 4.02
385 386 2.338620 CACGACGAGGCAGGACAA 59.661 61.111 0.00 0.00 0.00 3.18
386 387 1.300620 CACGACGAGGCAGGACAAA 60.301 57.895 0.00 0.00 0.00 2.83
387 388 0.670546 CACGACGAGGCAGGACAAAT 60.671 55.000 0.00 0.00 0.00 2.32
388 389 0.389948 ACGACGAGGCAGGACAAATC 60.390 55.000 0.00 0.00 0.00 2.17
389 390 1.084370 CGACGAGGCAGGACAAATCC 61.084 60.000 0.00 0.00 46.69 3.01
398 399 2.768834 GGACAAATCCTCGCACCTC 58.231 57.895 0.00 0.00 42.45 3.85
399 400 0.744771 GGACAAATCCTCGCACCTCC 60.745 60.000 0.00 0.00 42.45 4.30
400 401 0.744771 GACAAATCCTCGCACCTCCC 60.745 60.000 0.00 0.00 0.00 4.30
401 402 1.299648 CAAATCCTCGCACCTCCCA 59.700 57.895 0.00 0.00 0.00 4.37
402 403 0.107017 CAAATCCTCGCACCTCCCAT 60.107 55.000 0.00 0.00 0.00 4.00
403 404 0.625849 AAATCCTCGCACCTCCCATT 59.374 50.000 0.00 0.00 0.00 3.16
404 405 1.507140 AATCCTCGCACCTCCCATTA 58.493 50.000 0.00 0.00 0.00 1.90
405 406 1.507140 ATCCTCGCACCTCCCATTAA 58.493 50.000 0.00 0.00 0.00 1.40
406 407 1.507140 TCCTCGCACCTCCCATTAAT 58.493 50.000 0.00 0.00 0.00 1.40
407 408 2.684943 TCCTCGCACCTCCCATTAATA 58.315 47.619 0.00 0.00 0.00 0.98
408 409 2.632996 TCCTCGCACCTCCCATTAATAG 59.367 50.000 0.00 0.00 0.00 1.73
409 410 2.632996 CCTCGCACCTCCCATTAATAGA 59.367 50.000 0.00 0.00 0.00 1.98
410 411 3.071023 CCTCGCACCTCCCATTAATAGAA 59.929 47.826 0.00 0.00 0.00 2.10
411 412 4.310769 CTCGCACCTCCCATTAATAGAAG 58.689 47.826 0.00 0.00 0.00 2.85
412 413 3.071023 TCGCACCTCCCATTAATAGAAGG 59.929 47.826 7.35 7.35 0.00 3.46
413 414 3.181454 CGCACCTCCCATTAATAGAAGGT 60.181 47.826 8.35 8.35 0.00 3.50
414 415 4.686122 CGCACCTCCCATTAATAGAAGGTT 60.686 45.833 10.57 0.00 0.00 3.50
415 416 4.580580 GCACCTCCCATTAATAGAAGGTTG 59.419 45.833 10.57 8.54 0.00 3.77
416 417 5.755849 CACCTCCCATTAATAGAAGGTTGT 58.244 41.667 10.57 0.88 0.00 3.32
417 418 5.823045 CACCTCCCATTAATAGAAGGTTGTC 59.177 44.000 10.57 0.00 0.00 3.18
418 419 5.491078 ACCTCCCATTAATAGAAGGTTGTCA 59.509 40.000 8.35 0.00 0.00 3.58
419 420 6.011981 ACCTCCCATTAATAGAAGGTTGTCAA 60.012 38.462 8.35 0.00 0.00 3.18
420 421 6.318900 CCTCCCATTAATAGAAGGTTGTCAAC 59.681 42.308 7.20 7.20 0.00 3.18
421 422 6.785076 TCCCATTAATAGAAGGTTGTCAACA 58.215 36.000 17.29 0.00 0.00 3.33
422 423 7.235079 TCCCATTAATAGAAGGTTGTCAACAA 58.765 34.615 17.29 0.00 0.00 2.83
423 424 7.393234 TCCCATTAATAGAAGGTTGTCAACAAG 59.607 37.037 17.29 0.00 36.39 3.16
424 425 7.393234 CCCATTAATAGAAGGTTGTCAACAAGA 59.607 37.037 17.29 0.00 36.39 3.02
425 426 8.960591 CCATTAATAGAAGGTTGTCAACAAGAT 58.039 33.333 17.29 3.46 36.39 2.40
430 431 9.442047 AATAGAAGGTTGTCAACAAGATAAGAG 57.558 33.333 17.29 0.00 36.39 2.85
431 432 6.234177 AGAAGGTTGTCAACAAGATAAGAGG 58.766 40.000 17.29 0.00 36.39 3.69
432 433 4.911390 AGGTTGTCAACAAGATAAGAGGG 58.089 43.478 17.29 0.00 36.39 4.30
433 434 4.010349 GGTTGTCAACAAGATAAGAGGGG 58.990 47.826 17.29 0.00 36.39 4.79
434 435 3.350219 TGTCAACAAGATAAGAGGGGC 57.650 47.619 0.00 0.00 0.00 5.80
435 436 2.912956 TGTCAACAAGATAAGAGGGGCT 59.087 45.455 0.00 0.00 0.00 5.19
436 437 4.101114 TGTCAACAAGATAAGAGGGGCTA 58.899 43.478 0.00 0.00 0.00 3.93
437 438 4.162320 TGTCAACAAGATAAGAGGGGCTAG 59.838 45.833 0.00 0.00 0.00 3.42
438 439 3.134804 TCAACAAGATAAGAGGGGCTAGC 59.865 47.826 6.04 6.04 0.00 3.42
439 440 2.050918 ACAAGATAAGAGGGGCTAGCC 58.949 52.381 26.55 26.55 0.00 3.93
440 441 1.001406 CAAGATAAGAGGGGCTAGCCG 59.999 57.143 27.24 5.07 36.85 5.52
441 442 0.543174 AGATAAGAGGGGCTAGCCGG 60.543 60.000 27.24 0.00 36.85 6.13
442 443 0.542232 GATAAGAGGGGCTAGCCGGA 60.542 60.000 27.24 8.83 36.85 5.14
443 444 0.105142 ATAAGAGGGGCTAGCCGGAA 60.105 55.000 27.24 9.74 36.85 4.30
444 445 0.105142 TAAGAGGGGCTAGCCGGAAT 60.105 55.000 27.24 12.74 36.85 3.01
445 446 1.411651 AAGAGGGGCTAGCCGGAATC 61.412 60.000 27.24 20.07 36.85 2.52
446 447 2.040884 AGGGGCTAGCCGGAATCA 60.041 61.111 27.24 0.00 36.85 2.57
447 448 1.692749 AGGGGCTAGCCGGAATCAA 60.693 57.895 27.24 0.00 36.85 2.57
448 449 1.226262 GGGGCTAGCCGGAATCAAA 59.774 57.895 27.24 0.00 36.85 2.69
449 450 0.819666 GGGGCTAGCCGGAATCAAAG 60.820 60.000 27.24 0.00 36.85 2.77
450 451 1.448119 GGGCTAGCCGGAATCAAAGC 61.448 60.000 27.24 5.62 36.85 3.51
451 452 0.464554 GGCTAGCCGGAATCAAAGCT 60.465 55.000 20.16 0.00 39.37 3.74
452 453 1.202651 GGCTAGCCGGAATCAAAGCTA 60.203 52.381 20.16 0.00 36.79 3.32
453 454 2.551071 GGCTAGCCGGAATCAAAGCTAT 60.551 50.000 20.16 0.00 37.22 2.97
454 455 3.142174 GCTAGCCGGAATCAAAGCTATT 58.858 45.455 5.05 0.00 37.22 1.73
455 456 3.058639 GCTAGCCGGAATCAAAGCTATTG 60.059 47.826 5.05 0.00 37.22 1.90
456 457 3.004752 AGCCGGAATCAAAGCTATTGT 57.995 42.857 5.05 0.00 32.73 2.71
457 458 3.356290 AGCCGGAATCAAAGCTATTGTT 58.644 40.909 5.05 0.00 32.73 2.83
458 459 3.129287 AGCCGGAATCAAAGCTATTGTTG 59.871 43.478 5.05 0.00 32.73 3.33
459 460 3.128589 GCCGGAATCAAAGCTATTGTTGA 59.871 43.478 5.05 1.21 38.09 3.18
460 461 4.662145 CCGGAATCAAAGCTATTGTTGAC 58.338 43.478 0.00 0.00 36.62 3.18
461 462 4.396166 CCGGAATCAAAGCTATTGTTGACT 59.604 41.667 0.00 0.00 36.62 3.41
462 463 5.584649 CCGGAATCAAAGCTATTGTTGACTA 59.415 40.000 0.00 0.00 36.62 2.59
463 464 6.238211 CCGGAATCAAAGCTATTGTTGACTAG 60.238 42.308 0.00 0.00 36.62 2.57
464 465 6.535150 CGGAATCAAAGCTATTGTTGACTAGA 59.465 38.462 0.00 0.00 36.62 2.43
465 466 7.225538 CGGAATCAAAGCTATTGTTGACTAGAT 59.774 37.037 0.00 0.00 36.62 1.98
466 467 8.555361 GGAATCAAAGCTATTGTTGACTAGATC 58.445 37.037 0.00 0.00 36.62 2.75
467 468 9.323985 GAATCAAAGCTATTGTTGACTAGATCT 57.676 33.333 0.00 0.00 36.62 2.75
470 471 9.809096 TCAAAGCTATTGTTGACTAGATCTAAG 57.191 33.333 3.57 1.21 0.00 2.18
471 472 9.039870 CAAAGCTATTGTTGACTAGATCTAAGG 57.960 37.037 3.57 0.00 0.00 2.69
472 473 8.540507 AAGCTATTGTTGACTAGATCTAAGGA 57.459 34.615 3.57 0.00 0.00 3.36
473 474 8.177119 AGCTATTGTTGACTAGATCTAAGGAG 57.823 38.462 3.57 0.00 0.00 3.69
474 475 7.232534 AGCTATTGTTGACTAGATCTAAGGAGG 59.767 40.741 3.57 0.00 0.00 4.30
475 476 7.231722 GCTATTGTTGACTAGATCTAAGGAGGA 59.768 40.741 3.57 0.00 0.00 3.71
476 477 7.595819 ATTGTTGACTAGATCTAAGGAGGAG 57.404 40.000 3.57 0.00 0.00 3.69
477 478 4.890581 TGTTGACTAGATCTAAGGAGGAGC 59.109 45.833 3.57 0.00 0.00 4.70
478 479 5.137551 GTTGACTAGATCTAAGGAGGAGCT 58.862 45.833 3.57 0.00 33.81 4.09
479 480 4.724399 TGACTAGATCTAAGGAGGAGCTG 58.276 47.826 3.57 0.00 31.63 4.24
480 481 4.079253 GACTAGATCTAAGGAGGAGCTGG 58.921 52.174 3.57 0.00 34.65 4.85
481 482 1.715785 AGATCTAAGGAGGAGCTGGC 58.284 55.000 0.00 0.00 0.00 4.85
496 497 4.603535 GGCCACCAACCAGCCACT 62.604 66.667 0.00 0.00 46.34 4.00
497 498 2.985847 GCCACCAACCAGCCACTC 60.986 66.667 0.00 0.00 0.00 3.51
498 499 2.669569 CCACCAACCAGCCACTCG 60.670 66.667 0.00 0.00 0.00 4.18
499 500 3.357079 CACCAACCAGCCACTCGC 61.357 66.667 0.00 0.00 37.98 5.03
507 508 3.872603 AGCCACTCGCACCACCAA 61.873 61.111 0.00 0.00 41.38 3.67
512 513 0.307760 CACTCGCACCACCAAAGAAC 59.692 55.000 0.00 0.00 0.00 3.01
515 516 2.335011 GCACCACCAAAGAACGCC 59.665 61.111 0.00 0.00 0.00 5.68
525 526 1.507141 AAAGAACGCCTCCTGCAACG 61.507 55.000 0.00 0.00 41.33 4.10
528 529 1.822186 AACGCCTCCTGCAACGTTT 60.822 52.632 0.00 0.00 45.62 3.60
529 530 2.058829 AACGCCTCCTGCAACGTTTG 62.059 55.000 0.00 0.00 45.62 2.93
530 531 2.250939 CGCCTCCTGCAACGTTTGA 61.251 57.895 0.00 0.00 41.33 2.69
531 532 1.577328 CGCCTCCTGCAACGTTTGAT 61.577 55.000 0.00 0.00 41.33 2.57
533 534 1.522668 CCTCCTGCAACGTTTGATGA 58.477 50.000 0.00 0.00 0.00 2.92
538 539 1.267806 CTGCAACGTTTGATGAAGGCT 59.732 47.619 0.00 0.00 0.00 4.58
539 540 1.266718 TGCAACGTTTGATGAAGGCTC 59.733 47.619 0.00 0.00 0.00 4.70
540 541 1.266718 GCAACGTTTGATGAAGGCTCA 59.733 47.619 0.00 0.00 35.56 4.26
541 542 2.918131 GCAACGTTTGATGAAGGCTCAC 60.918 50.000 0.00 0.00 33.30 3.51
542 543 2.549754 CAACGTTTGATGAAGGCTCACT 59.450 45.455 0.00 0.00 33.30 3.41
545 546 1.135859 GTTTGATGAAGGCTCACTGCG 60.136 52.381 0.00 0.00 44.05 5.18
547 548 2.437359 ATGAAGGCTCACTGCGGC 60.437 61.111 0.00 0.00 44.05 6.53
567 568 4.488136 CGGCATAGGCTGGTGGCA 62.488 66.667 21.80 0.00 42.93 4.92
568 569 2.196776 GGCATAGGCTGGTGGCAT 59.803 61.111 18.79 0.00 44.01 4.40
572 573 0.035881 CATAGGCTGGTGGCATCGAT 59.964 55.000 0.00 0.00 44.01 3.59
576 577 0.601311 GGCTGGTGGCATCGATAGTC 60.601 60.000 0.00 0.00 44.01 2.59
577 578 0.390860 GCTGGTGGCATCGATAGTCT 59.609 55.000 0.00 0.00 41.35 3.24
579 580 1.683385 CTGGTGGCATCGATAGTCTGA 59.317 52.381 0.00 0.00 37.40 3.27
586 587 1.198867 CATCGATAGTCTGAGGGAGCG 59.801 57.143 0.00 0.00 37.40 5.03
589 590 2.136196 GATAGTCTGAGGGAGCGGCG 62.136 65.000 0.51 0.51 0.00 6.46
591 592 2.626255 TAGTCTGAGGGAGCGGCGAT 62.626 60.000 12.98 2.76 0.00 4.58
614 615 2.344025 GAAACCTAAGTGTGGTAGCGG 58.656 52.381 0.00 0.00 36.69 5.52
616 617 1.189524 ACCTAAGTGTGGTAGCGGCA 61.190 55.000 1.45 0.00 35.80 5.69
621 622 1.079127 GTGTGGTAGCGGCATGAGT 60.079 57.895 1.45 0.00 0.00 3.41
622 623 1.079197 TGTGGTAGCGGCATGAGTG 60.079 57.895 1.45 0.00 0.00 3.51
653 654 0.464373 CCCTAGGCATGCGACACAAT 60.464 55.000 12.44 0.00 0.00 2.71
658 659 1.066215 AGGCATGCGACACAATAGTCA 60.066 47.619 12.44 0.00 38.43 3.41
659 660 1.942657 GGCATGCGACACAATAGTCAT 59.057 47.619 12.44 0.00 38.43 3.06
662 663 1.368641 TGCGACACAATAGTCATGGC 58.631 50.000 0.00 0.00 38.43 4.40
671 672 0.327480 ATAGTCATGGCCTCACCCCA 60.327 55.000 3.32 0.00 37.83 4.96
687 688 0.181350 CCCATTCCCCTTCTTCCTCG 59.819 60.000 0.00 0.00 0.00 4.63
698 699 3.181474 CCTTCTTCCTCGACCCAACTATC 60.181 52.174 0.00 0.00 0.00 2.08
708 709 3.134804 CGACCCAACTATCTCTTTCCCAT 59.865 47.826 0.00 0.00 0.00 4.00
716 717 7.123247 CCAACTATCTCTTTCCCATCATTTTGT 59.877 37.037 0.00 0.00 0.00 2.83
718 719 9.753674 AACTATCTCTTTCCCATCATTTTGTTA 57.246 29.630 0.00 0.00 0.00 2.41
734 735 3.906720 TGTTACCTCCTTGCCTCATAC 57.093 47.619 0.00 0.00 0.00 2.39
735 736 2.504175 TGTTACCTCCTTGCCTCATACC 59.496 50.000 0.00 0.00 0.00 2.73
736 737 2.504175 GTTACCTCCTTGCCTCATACCA 59.496 50.000 0.00 0.00 0.00 3.25
763 798 9.667107 TCGGTAGATTTTCCATAATAATCATCC 57.333 33.333 0.00 0.00 32.11 3.51
818 863 7.549134 CCCTTGATAGTATATGCGAATTGCTAA 59.451 37.037 0.00 0.00 46.63 3.09
846 900 6.949352 ATATCAGTTTGTTATCTTGGGCTG 57.051 37.500 0.00 0.00 0.00 4.85
896 959 0.608308 CCAAACGGACCTTCCTTCCC 60.608 60.000 0.00 0.00 33.30 3.97
898 961 0.400594 AAACGGACCTTCCTTCCCAG 59.599 55.000 0.00 0.00 33.30 4.45
970 1040 5.550403 TCCACTGGAAAACCCTAGAAATAGT 59.450 40.000 0.00 0.00 35.38 2.12
983 1069 5.125739 CCTAGAAATAGTCTCGACACAAGGT 59.874 44.000 0.00 0.00 37.84 3.50
1105 1191 3.228017 GCCTCTCCCCGGAGCTAC 61.228 72.222 0.73 0.00 41.71 3.58
1395 1503 1.860641 TCCTCATCTGCGACCCTTTA 58.139 50.000 0.00 0.00 0.00 1.85
1545 1692 2.017559 GAGTTGAGGCCCGCGTCTAT 62.018 60.000 4.92 0.00 0.00 1.98
1626 1805 4.309950 GTCCCCGTCACCGTGCTT 62.310 66.667 0.00 0.00 0.00 3.91
1841 2020 0.314578 CGCAACATCGATTCTCACGC 60.315 55.000 0.00 0.00 0.00 5.34
2375 2720 0.692756 TGATTACCAGGCCCATCGGA 60.693 55.000 0.00 0.00 0.00 4.55
2532 2878 3.872771 GGTTCTGGTCTCGTGTTTGTTTA 59.127 43.478 0.00 0.00 0.00 2.01
2533 2879 4.514066 GGTTCTGGTCTCGTGTTTGTTTAT 59.486 41.667 0.00 0.00 0.00 1.40
2534 2880 5.008316 GGTTCTGGTCTCGTGTTTGTTTATT 59.992 40.000 0.00 0.00 0.00 1.40
2633 4388 1.078567 GAACTCAGGCTGGGAGCAG 60.079 63.158 23.81 10.13 44.75 4.24
2732 4491 2.507407 TCACCTTGCCATAAGGGTTC 57.493 50.000 10.19 0.00 41.71 3.62
2749 4508 6.305272 AGGGTTCACATGCATCCTATATAG 57.695 41.667 0.00 2.46 0.00 1.31
2761 4520 5.566826 GCATCCTATATAGAGAACCGTTGCA 60.567 44.000 11.53 0.00 0.00 4.08
2905 4668 8.731275 TGACTTTTTGTTAGAGTCAGATTTCA 57.269 30.769 1.60 0.00 43.38 2.69
3075 6598 6.251549 GTTCAAACTCTGAGTTGTCTTTCAC 58.748 40.000 22.67 9.75 38.66 3.18
3079 6602 4.608951 ACTCTGAGTTGTCTTTCACGTAC 58.391 43.478 4.06 0.00 0.00 3.67
3093 6616 7.216693 GTCTTTCACGTACTTTCTCTTATCGAG 59.783 40.741 0.00 0.00 41.30 4.04
3104 6627 9.804758 ACTTTCTCTTATCGAGGTACTATTTTG 57.195 33.333 0.00 0.00 41.55 2.44
3127 6650 6.749139 TGAGTTATATCGTTAGAAGCTGCAT 58.251 36.000 1.02 0.00 0.00 3.96
3235 6761 3.208747 TGAAGTTGACTCCTGGGTTTC 57.791 47.619 0.00 0.00 0.00 2.78
3331 6862 4.925646 GCCTGCAAATTTTAGAGACCTTTG 59.074 41.667 0.00 0.00 0.00 2.77
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 0.391793 GAGAAACTGCCGGGAGAAGG 60.392 60.000 31.46 3.75 0.00 3.46
8 9 0.610687 AGAGAAACTGCCGGGAGAAG 59.389 55.000 31.46 4.20 0.00 2.85
9 10 0.321671 CAGAGAAACTGCCGGGAGAA 59.678 55.000 31.46 0.00 39.86 2.87
10 11 1.975327 CAGAGAAACTGCCGGGAGA 59.025 57.895 31.46 0.00 39.86 3.71
11 12 4.606071 CAGAGAAACTGCCGGGAG 57.394 61.111 22.94 22.94 39.86 4.30
17 18 8.218876 ACACTAATGTAAGGACAGAGAAACTGC 61.219 40.741 0.00 0.00 43.09 4.40
18 19 7.155328 ACACTAATGTAAGGACAGAGAAACTG 58.845 38.462 0.00 0.00 44.07 3.16
19 20 7.304497 ACACTAATGTAAGGACAGAGAAACT 57.696 36.000 0.00 0.00 39.50 2.66
20 21 7.441458 ACAACACTAATGTAAGGACAGAGAAAC 59.559 37.037 0.00 0.00 38.45 2.78
21 22 7.441157 CACAACACTAATGTAAGGACAGAGAAA 59.559 37.037 0.00 0.00 38.45 2.52
22 23 6.929049 CACAACACTAATGTAAGGACAGAGAA 59.071 38.462 0.00 0.00 38.45 2.87
23 24 6.455647 CACAACACTAATGTAAGGACAGAGA 58.544 40.000 0.00 0.00 38.45 3.10
24 25 5.639506 CCACAACACTAATGTAAGGACAGAG 59.360 44.000 0.00 0.00 38.45 3.35
25 26 5.071250 ACCACAACACTAATGTAAGGACAGA 59.929 40.000 0.00 0.00 38.45 3.41
26 27 5.179368 CACCACAACACTAATGTAAGGACAG 59.821 44.000 0.00 0.00 38.45 3.51
27 28 5.060506 CACCACAACACTAATGTAAGGACA 58.939 41.667 0.00 0.00 38.45 4.02
28 29 5.061179 ACACCACAACACTAATGTAAGGAC 58.939 41.667 0.00 0.00 38.45 3.85
29 30 5.298989 ACACCACAACACTAATGTAAGGA 57.701 39.130 0.00 0.00 38.45 3.36
30 31 6.147164 CACTACACCACAACACTAATGTAAGG 59.853 42.308 0.00 0.00 38.45 2.69
31 32 6.704493 ACACTACACCACAACACTAATGTAAG 59.296 38.462 0.00 0.00 38.45 2.34
32 33 6.480651 CACACTACACCACAACACTAATGTAA 59.519 38.462 0.00 0.00 38.45 2.41
33 34 5.986741 CACACTACACCACAACACTAATGTA 59.013 40.000 0.00 0.00 38.45 2.29
34 35 4.814234 CACACTACACCACAACACTAATGT 59.186 41.667 0.00 0.00 42.46 2.71
35 36 4.319477 GCACACTACACCACAACACTAATG 60.319 45.833 0.00 0.00 0.00 1.90
36 37 3.813166 GCACACTACACCACAACACTAAT 59.187 43.478 0.00 0.00 0.00 1.73
37 38 3.199677 GCACACTACACCACAACACTAA 58.800 45.455 0.00 0.00 0.00 2.24
38 39 2.800273 CGCACACTACACCACAACACTA 60.800 50.000 0.00 0.00 0.00 2.74
39 40 1.663695 GCACACTACACCACAACACT 58.336 50.000 0.00 0.00 0.00 3.55
40 41 0.303493 CGCACACTACACCACAACAC 59.697 55.000 0.00 0.00 0.00 3.32
41 42 0.108089 ACGCACACTACACCACAACA 60.108 50.000 0.00 0.00 0.00 3.33
42 43 1.004292 GAACGCACACTACACCACAAC 60.004 52.381 0.00 0.00 0.00 3.32
43 44 1.292061 GAACGCACACTACACCACAA 58.708 50.000 0.00 0.00 0.00 3.33
44 45 0.175989 TGAACGCACACTACACCACA 59.824 50.000 0.00 0.00 0.00 4.17
45 46 0.580104 GTGAACGCACACTACACCAC 59.420 55.000 5.51 0.00 44.51 4.16
46 47 2.980562 GTGAACGCACACTACACCA 58.019 52.632 5.51 0.00 44.51 4.17
55 56 0.531974 TGACTTGGGAGTGAACGCAC 60.532 55.000 0.00 0.00 45.49 5.34
56 57 0.396435 ATGACTTGGGAGTGAACGCA 59.604 50.000 0.00 0.00 35.88 5.24
57 58 1.464997 GAATGACTTGGGAGTGAACGC 59.535 52.381 0.00 0.00 35.88 4.84
58 59 2.076863 GGAATGACTTGGGAGTGAACG 58.923 52.381 0.00 0.00 35.88 3.95
59 60 3.140325 TGGAATGACTTGGGAGTGAAC 57.860 47.619 0.00 0.00 35.88 3.18
60 61 4.081406 CAATGGAATGACTTGGGAGTGAA 58.919 43.478 0.00 0.00 35.88 3.18
61 62 3.561960 CCAATGGAATGACTTGGGAGTGA 60.562 47.826 0.00 0.00 36.58 3.41
62 63 2.756760 CCAATGGAATGACTTGGGAGTG 59.243 50.000 0.00 0.00 36.58 3.51
63 64 2.379907 ACCAATGGAATGACTTGGGAGT 59.620 45.455 6.16 0.00 43.02 3.85
64 65 3.091633 ACCAATGGAATGACTTGGGAG 57.908 47.619 6.16 0.00 43.02 4.30
65 66 3.624707 GCTACCAATGGAATGACTTGGGA 60.625 47.826 6.16 0.00 43.02 4.37
66 67 2.689983 GCTACCAATGGAATGACTTGGG 59.310 50.000 6.16 0.00 43.02 4.12
67 68 3.624777 AGCTACCAATGGAATGACTTGG 58.375 45.455 6.16 0.00 44.06 3.61
68 69 5.649782 AAAGCTACCAATGGAATGACTTG 57.350 39.130 6.16 0.00 0.00 3.16
69 70 6.670695 AAAAAGCTACCAATGGAATGACTT 57.329 33.333 6.16 0.00 0.00 3.01
92 93 9.120538 GGGCTATAGACATACATGAAAAGAAAA 57.879 33.333 8.15 0.00 0.00 2.29
93 94 8.271458 TGGGCTATAGACATACATGAAAAGAAA 58.729 33.333 8.15 0.00 0.00 2.52
94 95 7.801104 TGGGCTATAGACATACATGAAAAGAA 58.199 34.615 8.15 0.00 0.00 2.52
95 96 7.373617 TGGGCTATAGACATACATGAAAAGA 57.626 36.000 8.15 0.00 0.00 2.52
96 97 8.345565 GTTTGGGCTATAGACATACATGAAAAG 58.654 37.037 8.15 0.00 0.00 2.27
97 98 7.011950 CGTTTGGGCTATAGACATACATGAAAA 59.988 37.037 8.15 0.00 0.00 2.29
98 99 6.481976 CGTTTGGGCTATAGACATACATGAAA 59.518 38.462 8.15 0.00 0.00 2.69
99 100 5.989168 CGTTTGGGCTATAGACATACATGAA 59.011 40.000 8.15 0.00 0.00 2.57
100 101 5.303333 TCGTTTGGGCTATAGACATACATGA 59.697 40.000 8.15 0.00 0.00 3.07
101 102 5.538118 TCGTTTGGGCTATAGACATACATG 58.462 41.667 8.15 0.00 0.00 3.21
102 103 5.801531 TCGTTTGGGCTATAGACATACAT 57.198 39.130 8.15 0.00 0.00 2.29
103 104 5.353938 GTTCGTTTGGGCTATAGACATACA 58.646 41.667 8.15 0.00 0.00 2.29
104 105 4.748600 GGTTCGTTTGGGCTATAGACATAC 59.251 45.833 8.15 7.90 0.00 2.39
105 106 4.652421 AGGTTCGTTTGGGCTATAGACATA 59.348 41.667 8.15 0.00 0.00 2.29
106 107 3.454812 AGGTTCGTTTGGGCTATAGACAT 59.545 43.478 8.15 0.00 0.00 3.06
107 108 2.835764 AGGTTCGTTTGGGCTATAGACA 59.164 45.455 8.15 0.46 0.00 3.41
108 109 3.538634 AGGTTCGTTTGGGCTATAGAC 57.461 47.619 3.21 0.00 0.00 2.59
109 110 5.881923 ATAAGGTTCGTTTGGGCTATAGA 57.118 39.130 3.21 0.00 0.00 1.98
110 111 6.867293 GTCTATAAGGTTCGTTTGGGCTATAG 59.133 42.308 0.00 0.00 0.00 1.31
111 112 6.324512 TGTCTATAAGGTTCGTTTGGGCTATA 59.675 38.462 0.00 0.00 0.00 1.31
112 113 5.129815 TGTCTATAAGGTTCGTTTGGGCTAT 59.870 40.000 0.00 0.00 0.00 2.97
113 114 4.467082 TGTCTATAAGGTTCGTTTGGGCTA 59.533 41.667 0.00 0.00 0.00 3.93
114 115 3.262405 TGTCTATAAGGTTCGTTTGGGCT 59.738 43.478 0.00 0.00 0.00 5.19
115 116 3.373130 GTGTCTATAAGGTTCGTTTGGGC 59.627 47.826 0.00 0.00 0.00 5.36
116 117 4.390909 GTGTGTCTATAAGGTTCGTTTGGG 59.609 45.833 0.00 0.00 0.00 4.12
117 118 4.992319 TGTGTGTCTATAAGGTTCGTTTGG 59.008 41.667 0.00 0.00 0.00 3.28
118 119 6.533819 TTGTGTGTCTATAAGGTTCGTTTG 57.466 37.500 0.00 0.00 0.00 2.93
119 120 6.987992 TCTTTGTGTGTCTATAAGGTTCGTTT 59.012 34.615 0.00 0.00 0.00 3.60
120 121 6.518493 TCTTTGTGTGTCTATAAGGTTCGTT 58.482 36.000 0.00 0.00 0.00 3.85
121 122 6.092955 TCTTTGTGTGTCTATAAGGTTCGT 57.907 37.500 0.00 0.00 0.00 3.85
122 123 7.416154 TTTCTTTGTGTGTCTATAAGGTTCG 57.584 36.000 0.00 0.00 0.00 3.95
123 124 8.290325 CCTTTTCTTTGTGTGTCTATAAGGTTC 58.710 37.037 0.00 0.00 0.00 3.62
124 125 7.996644 TCCTTTTCTTTGTGTGTCTATAAGGTT 59.003 33.333 0.00 0.00 32.34 3.50
125 126 7.514721 TCCTTTTCTTTGTGTGTCTATAAGGT 58.485 34.615 0.00 0.00 32.34 3.50
126 127 7.979444 TCCTTTTCTTTGTGTGTCTATAAGG 57.021 36.000 0.00 0.00 0.00 2.69
127 128 9.884465 CTTTCCTTTTCTTTGTGTGTCTATAAG 57.116 33.333 0.00 0.00 0.00 1.73
128 129 9.621629 TCTTTCCTTTTCTTTGTGTGTCTATAA 57.378 29.630 0.00 0.00 0.00 0.98
129 130 9.273016 CTCTTTCCTTTTCTTTGTGTGTCTATA 57.727 33.333 0.00 0.00 0.00 1.31
130 131 7.775561 ACTCTTTCCTTTTCTTTGTGTGTCTAT 59.224 33.333 0.00 0.00 0.00 1.98
131 132 7.110155 ACTCTTTCCTTTTCTTTGTGTGTCTA 58.890 34.615 0.00 0.00 0.00 2.59
132 133 5.946377 ACTCTTTCCTTTTCTTTGTGTGTCT 59.054 36.000 0.00 0.00 0.00 3.41
133 134 6.196079 ACTCTTTCCTTTTCTTTGTGTGTC 57.804 37.500 0.00 0.00 0.00 3.67
134 135 5.125578 GGACTCTTTCCTTTTCTTTGTGTGT 59.874 40.000 0.00 0.00 41.95 3.72
135 136 5.450550 GGGACTCTTTCCTTTTCTTTGTGTG 60.451 44.000 0.00 0.00 45.09 3.82
136 137 4.645136 GGGACTCTTTCCTTTTCTTTGTGT 59.355 41.667 0.00 0.00 45.09 3.72
137 138 4.261197 CGGGACTCTTTCCTTTTCTTTGTG 60.261 45.833 0.00 0.00 45.09 3.33
138 139 3.883489 CGGGACTCTTTCCTTTTCTTTGT 59.117 43.478 0.00 0.00 45.09 2.83
139 140 3.883489 ACGGGACTCTTTCCTTTTCTTTG 59.117 43.478 0.00 0.00 45.09 2.77
140 141 4.166246 ACGGGACTCTTTCCTTTTCTTT 57.834 40.909 0.00 0.00 45.09 2.52
141 142 3.859061 ACGGGACTCTTTCCTTTTCTT 57.141 42.857 0.00 0.00 45.09 2.52
142 143 3.496337 GGAACGGGACTCTTTCCTTTTCT 60.496 47.826 3.32 0.00 45.09 2.52
143 144 2.812591 GGAACGGGACTCTTTCCTTTTC 59.187 50.000 3.32 0.00 45.09 2.29
144 145 2.442126 AGGAACGGGACTCTTTCCTTTT 59.558 45.455 7.29 0.00 45.74 2.27
145 146 2.055579 AGGAACGGGACTCTTTCCTTT 58.944 47.619 7.29 0.00 45.74 3.11
146 147 1.348036 CAGGAACGGGACTCTTTCCTT 59.652 52.381 10.37 0.00 45.74 3.36
147 148 3.477783 AGGAACGGGACTCTTTCCT 57.522 52.632 7.29 7.29 45.09 3.36
148 149 0.673956 GCAGGAACGGGACTCTTTCC 60.674 60.000 2.27 2.27 45.00 3.13
149 150 0.673956 GGCAGGAACGGGACTCTTTC 60.674 60.000 0.00 0.00 0.00 2.62
150 151 1.375326 GGCAGGAACGGGACTCTTT 59.625 57.895 0.00 0.00 0.00 2.52
151 152 1.841556 TGGCAGGAACGGGACTCTT 60.842 57.895 0.00 0.00 0.00 2.85
152 153 2.203788 TGGCAGGAACGGGACTCT 60.204 61.111 0.00 0.00 0.00 3.24
153 154 2.047179 GTGGCAGGAACGGGACTC 60.047 66.667 0.00 0.00 0.00 3.36
154 155 3.637273 GGTGGCAGGAACGGGACT 61.637 66.667 0.00 0.00 0.00 3.85
155 156 4.717313 GGGTGGCAGGAACGGGAC 62.717 72.222 0.00 0.00 0.00 4.46
171 172 1.756538 GTATTGCAATGGAAGTGGGGG 59.243 52.381 22.27 0.00 28.90 5.40
172 173 1.756538 GGTATTGCAATGGAAGTGGGG 59.243 52.381 22.27 0.00 28.90 4.96
173 174 1.756538 GGGTATTGCAATGGAAGTGGG 59.243 52.381 22.27 0.00 28.90 4.61
174 175 2.738743 AGGGTATTGCAATGGAAGTGG 58.261 47.619 22.27 0.00 28.90 4.00
175 176 5.913137 TTTAGGGTATTGCAATGGAAGTG 57.087 39.130 22.27 0.00 33.24 3.16
176 177 6.926630 TTTTTAGGGTATTGCAATGGAAGT 57.073 33.333 22.27 5.41 0.00 3.01
196 197 0.251341 AGGGATGCGAGCCTGTTTTT 60.251 50.000 0.00 0.00 0.00 1.94
197 198 0.618458 TAGGGATGCGAGCCTGTTTT 59.382 50.000 0.00 0.00 0.00 2.43
198 199 0.839946 ATAGGGATGCGAGCCTGTTT 59.160 50.000 0.00 0.00 0.00 2.83
199 200 0.839946 AATAGGGATGCGAGCCTGTT 59.160 50.000 0.00 0.00 0.00 3.16
200 201 0.394565 GAATAGGGATGCGAGCCTGT 59.605 55.000 0.00 0.00 0.00 4.00
201 202 0.321122 GGAATAGGGATGCGAGCCTG 60.321 60.000 0.00 0.00 0.00 4.85
202 203 0.764369 TGGAATAGGGATGCGAGCCT 60.764 55.000 0.00 0.00 0.00 4.58
203 204 0.326264 ATGGAATAGGGATGCGAGCC 59.674 55.000 0.00 0.00 0.00 4.70
204 205 2.079925 GAATGGAATAGGGATGCGAGC 58.920 52.381 0.00 0.00 0.00 5.03
205 206 2.038952 TGGAATGGAATAGGGATGCGAG 59.961 50.000 0.00 0.00 0.00 5.03
206 207 2.054021 TGGAATGGAATAGGGATGCGA 58.946 47.619 0.00 0.00 0.00 5.10
207 208 2.154462 GTGGAATGGAATAGGGATGCG 58.846 52.381 0.00 0.00 0.00 4.73
208 209 2.887152 GTGTGGAATGGAATAGGGATGC 59.113 50.000 0.00 0.00 0.00 3.91
209 210 3.141398 CGTGTGGAATGGAATAGGGATG 58.859 50.000 0.00 0.00 0.00 3.51
210 211 2.106511 CCGTGTGGAATGGAATAGGGAT 59.893 50.000 0.00 0.00 37.06 3.85
211 212 1.488812 CCGTGTGGAATGGAATAGGGA 59.511 52.381 0.00 0.00 37.06 4.20
212 213 1.476833 CCCGTGTGGAATGGAATAGGG 60.477 57.143 0.00 0.00 37.06 3.53
213 214 1.211949 ACCCGTGTGGAATGGAATAGG 59.788 52.381 0.00 0.00 37.06 2.57
214 215 2.710096 ACCCGTGTGGAATGGAATAG 57.290 50.000 0.00 0.00 37.06 1.73
215 216 3.263681 TGTTACCCGTGTGGAATGGAATA 59.736 43.478 0.00 0.00 37.06 1.75
216 217 2.040545 TGTTACCCGTGTGGAATGGAAT 59.959 45.455 0.00 0.00 37.06 3.01
217 218 1.420514 TGTTACCCGTGTGGAATGGAA 59.579 47.619 0.00 0.00 37.06 3.53
218 219 1.057471 TGTTACCCGTGTGGAATGGA 58.943 50.000 0.00 0.00 37.06 3.41
219 220 2.014128 GATGTTACCCGTGTGGAATGG 58.986 52.381 0.00 0.00 37.49 3.16
220 221 1.663643 CGATGTTACCCGTGTGGAATG 59.336 52.381 0.00 0.00 37.49 2.67
221 222 1.406341 CCGATGTTACCCGTGTGGAAT 60.406 52.381 0.00 0.00 37.49 3.01
222 223 0.037139 CCGATGTTACCCGTGTGGAA 60.037 55.000 0.00 0.00 37.49 3.53
223 224 1.592743 CCGATGTTACCCGTGTGGA 59.407 57.895 0.00 0.00 37.49 4.02
224 225 2.104253 GCCGATGTTACCCGTGTGG 61.104 63.158 0.00 0.00 41.37 4.17
225 226 2.449525 CGCCGATGTTACCCGTGTG 61.450 63.158 0.00 0.00 0.00 3.82
226 227 2.125832 CGCCGATGTTACCCGTGT 60.126 61.111 0.00 0.00 0.00 4.49
227 228 2.888534 CCGCCGATGTTACCCGTG 60.889 66.667 0.00 0.00 0.00 4.94
228 229 3.360956 GACCGCCGATGTTACCCGT 62.361 63.158 0.00 0.00 0.00 5.28
229 230 2.584143 GACCGCCGATGTTACCCG 60.584 66.667 0.00 0.00 0.00 5.28
230 231 1.520787 CTGACCGCCGATGTTACCC 60.521 63.158 0.00 0.00 0.00 3.69
231 232 0.104304 ATCTGACCGCCGATGTTACC 59.896 55.000 0.00 0.00 0.00 2.85
232 233 1.202371 TCATCTGACCGCCGATGTTAC 60.202 52.381 0.00 0.00 38.47 2.50
233 234 1.107945 TCATCTGACCGCCGATGTTA 58.892 50.000 0.00 0.00 38.47 2.41
234 235 0.460284 GTCATCTGACCGCCGATGTT 60.460 55.000 0.00 0.00 39.07 2.71
235 236 1.141881 GTCATCTGACCGCCGATGT 59.858 57.895 0.00 0.00 39.07 3.06
236 237 4.018609 GTCATCTGACCGCCGATG 57.981 61.111 0.00 0.00 39.07 3.84
244 245 1.341531 CATAGTCGGGGGTCATCTGAC 59.658 57.143 1.59 1.59 44.04 3.51
245 246 1.704641 CATAGTCGGGGGTCATCTGA 58.295 55.000 0.00 0.00 0.00 3.27
246 247 0.681733 CCATAGTCGGGGGTCATCTG 59.318 60.000 0.00 0.00 0.00 2.90
247 248 1.122019 GCCATAGTCGGGGGTCATCT 61.122 60.000 0.00 0.00 0.00 2.90
248 249 1.371558 GCCATAGTCGGGGGTCATC 59.628 63.158 0.00 0.00 0.00 2.92
249 250 2.147387 GGCCATAGTCGGGGGTCAT 61.147 63.158 0.00 0.00 0.00 3.06
250 251 2.766651 GGCCATAGTCGGGGGTCA 60.767 66.667 0.00 0.00 0.00 4.02
251 252 2.766651 TGGCCATAGTCGGGGGTC 60.767 66.667 0.00 0.00 0.00 4.46
252 253 3.087906 GTGGCCATAGTCGGGGGT 61.088 66.667 9.72 0.00 0.00 4.95
253 254 3.873812 GGTGGCCATAGTCGGGGG 61.874 72.222 9.72 0.00 0.00 5.40
254 255 4.235762 CGGTGGCCATAGTCGGGG 62.236 72.222 9.72 0.00 0.00 5.73
255 256 4.910585 GCGGTGGCCATAGTCGGG 62.911 72.222 9.72 0.00 0.00 5.14
256 257 4.155733 TGCGGTGGCCATAGTCGG 62.156 66.667 9.72 0.77 38.85 4.79
257 258 2.586079 CTGCGGTGGCCATAGTCG 60.586 66.667 9.72 12.43 38.85 4.18
258 259 1.078426 AACTGCGGTGGCCATAGTC 60.078 57.895 9.72 0.00 38.85 2.59
259 260 1.078426 GAACTGCGGTGGCCATAGT 60.078 57.895 9.72 8.95 38.85 2.12
260 261 2.173669 CGAACTGCGGTGGCCATAG 61.174 63.158 9.72 7.48 38.85 2.23
261 262 2.125310 CGAACTGCGGTGGCCATA 60.125 61.111 9.72 0.00 38.85 2.74
262 263 4.329545 ACGAACTGCGGTGGCCAT 62.330 61.111 9.72 0.00 46.49 4.40
263 264 4.980805 GACGAACTGCGGTGGCCA 62.981 66.667 0.00 0.00 46.49 5.36
271 272 2.190981 CTATAACCACCGACGAACTGC 58.809 52.381 0.00 0.00 0.00 4.40
272 273 2.190981 GCTATAACCACCGACGAACTG 58.809 52.381 0.00 0.00 0.00 3.16
273 274 1.202222 CGCTATAACCACCGACGAACT 60.202 52.381 0.00 0.00 0.00 3.01
274 275 1.194495 CGCTATAACCACCGACGAAC 58.806 55.000 0.00 0.00 0.00 3.95
275 276 0.101040 CCGCTATAACCACCGACGAA 59.899 55.000 0.00 0.00 0.00 3.85
276 277 1.729276 CCGCTATAACCACCGACGA 59.271 57.895 0.00 0.00 0.00 4.20
277 278 1.947642 GCCGCTATAACCACCGACG 60.948 63.158 0.00 0.00 0.00 5.12
278 279 1.947642 CGCCGCTATAACCACCGAC 60.948 63.158 0.00 0.00 0.00 4.79
279 280 2.340453 GACGCCGCTATAACCACCGA 62.340 60.000 0.00 0.00 0.00 4.69
280 281 1.947642 GACGCCGCTATAACCACCG 60.948 63.158 0.00 0.00 0.00 4.94
281 282 1.947642 CGACGCCGCTATAACCACC 60.948 63.158 0.00 0.00 0.00 4.61
282 283 3.609258 CGACGCCGCTATAACCAC 58.391 61.111 0.00 0.00 0.00 4.16
293 294 2.852495 TTTCATCCTCCAGCGACGCC 62.852 60.000 17.79 0.00 0.00 5.68
294 295 1.019278 TTTTCATCCTCCAGCGACGC 61.019 55.000 13.03 13.03 0.00 5.19
295 296 0.721718 GTTTTCATCCTCCAGCGACG 59.278 55.000 0.00 0.00 0.00 5.12
296 297 0.721718 CGTTTTCATCCTCCAGCGAC 59.278 55.000 0.00 0.00 0.00 5.19
297 298 0.320374 ACGTTTTCATCCTCCAGCGA 59.680 50.000 0.00 0.00 0.00 4.93
298 299 0.721718 GACGTTTTCATCCTCCAGCG 59.278 55.000 0.00 0.00 0.00 5.18
299 300 1.087501 GGACGTTTTCATCCTCCAGC 58.912 55.000 0.00 0.00 31.75 4.85
300 301 2.770164 AGGACGTTTTCATCCTCCAG 57.230 50.000 0.00 0.00 41.83 3.86
305 306 1.076332 CACCGAGGACGTTTTCATCC 58.924 55.000 0.00 0.00 37.88 3.51
306 307 1.993370 CTCACCGAGGACGTTTTCATC 59.007 52.381 0.00 0.00 37.88 2.92
307 308 2.080286 CTCACCGAGGACGTTTTCAT 57.920 50.000 0.00 0.00 37.88 2.57
308 309 3.580904 CTCACCGAGGACGTTTTCA 57.419 52.632 0.00 0.00 37.88 2.69
318 319 2.567049 GACGTGGACCTCACCGAG 59.433 66.667 0.00 0.00 43.23 4.63
319 320 2.987547 GGACGTGGACCTCACCGA 60.988 66.667 0.00 0.00 43.23 4.69
320 321 2.558554 GATGGACGTGGACCTCACCG 62.559 65.000 0.00 0.00 43.23 4.94
321 322 1.218316 GATGGACGTGGACCTCACC 59.782 63.158 0.00 0.00 43.23 4.02
322 323 0.173708 GAGATGGACGTGGACCTCAC 59.826 60.000 0.00 0.00 42.74 3.51
323 324 0.039764 AGAGATGGACGTGGACCTCA 59.960 55.000 0.00 0.00 0.00 3.86
324 325 0.741915 GAGAGATGGACGTGGACCTC 59.258 60.000 0.00 0.00 0.00 3.85
325 326 0.333312 AGAGAGATGGACGTGGACCT 59.667 55.000 0.00 0.00 0.00 3.85
326 327 0.741915 GAGAGAGATGGACGTGGACC 59.258 60.000 0.00 0.00 0.00 4.46
327 328 1.403679 CAGAGAGAGATGGACGTGGAC 59.596 57.143 0.00 0.00 0.00 4.02
328 329 1.756430 CAGAGAGAGATGGACGTGGA 58.244 55.000 0.00 0.00 0.00 4.02
329 330 0.102120 GCAGAGAGAGATGGACGTGG 59.898 60.000 0.00 0.00 0.00 4.94
330 331 0.813821 TGCAGAGAGAGATGGACGTG 59.186 55.000 0.00 0.00 0.00 4.49
331 332 1.102154 CTGCAGAGAGAGATGGACGT 58.898 55.000 8.42 0.00 0.00 4.34
332 333 0.248990 GCTGCAGAGAGAGATGGACG 60.249 60.000 20.43 0.00 0.00 4.79
333 334 0.104671 GGCTGCAGAGAGAGATGGAC 59.895 60.000 20.43 0.00 0.00 4.02
334 335 0.325016 TGGCTGCAGAGAGAGATGGA 60.325 55.000 20.43 0.00 0.00 3.41
335 336 0.759959 ATGGCTGCAGAGAGAGATGG 59.240 55.000 20.43 0.00 0.00 3.51
336 337 1.270412 GGATGGCTGCAGAGAGAGATG 60.270 57.143 20.43 0.00 0.00 2.90
337 338 1.050204 GGATGGCTGCAGAGAGAGAT 58.950 55.000 20.43 0.00 0.00 2.75
338 339 0.032316 AGGATGGCTGCAGAGAGAGA 60.032 55.000 20.43 0.00 0.00 3.10
339 340 0.390124 GAGGATGGCTGCAGAGAGAG 59.610 60.000 20.43 0.00 0.00 3.20
340 341 1.047596 GGAGGATGGCTGCAGAGAGA 61.048 60.000 20.43 0.00 0.00 3.10
341 342 1.446791 GGAGGATGGCTGCAGAGAG 59.553 63.158 20.43 0.00 0.00 3.20
342 343 2.068821 GGGAGGATGGCTGCAGAGA 61.069 63.158 20.43 2.07 0.00 3.10
343 344 2.042404 GAGGGAGGATGGCTGCAGAG 62.042 65.000 20.43 0.00 0.00 3.35
344 345 2.041762 AGGGAGGATGGCTGCAGA 59.958 61.111 20.43 0.00 0.00 4.26
345 346 2.509916 GAGGGAGGATGGCTGCAG 59.490 66.667 10.11 10.11 0.00 4.41
346 347 3.092511 GGAGGGAGGATGGCTGCA 61.093 66.667 0.50 0.00 0.00 4.41
347 348 2.771762 AGGAGGGAGGATGGCTGC 60.772 66.667 0.00 0.00 0.00 5.25
348 349 3.117452 GCAGGAGGGAGGATGGCTG 62.117 68.421 0.00 0.00 0.00 4.85
349 350 2.771762 GCAGGAGGGAGGATGGCT 60.772 66.667 0.00 0.00 0.00 4.75
350 351 3.883549 GGCAGGAGGGAGGATGGC 61.884 72.222 0.00 0.00 0.00 4.40
351 352 3.174265 GGGCAGGAGGGAGGATGG 61.174 72.222 0.00 0.00 0.00 3.51
352 353 2.367377 TGGGCAGGAGGGAGGATG 60.367 66.667 0.00 0.00 0.00 3.51
353 354 2.367512 GTGGGCAGGAGGGAGGAT 60.368 66.667 0.00 0.00 0.00 3.24
356 357 3.775654 GTCGTGGGCAGGAGGGAG 61.776 72.222 0.00 0.00 0.00 4.30
359 360 4.135153 CTCGTCGTGGGCAGGAGG 62.135 72.222 0.00 0.00 33.82 4.30
360 361 4.135153 CCTCGTCGTGGGCAGGAG 62.135 72.222 5.40 0.00 0.00 3.69
366 367 4.436998 GTCCTGCCTCGTCGTGGG 62.437 72.222 14.77 8.73 0.00 4.61
367 368 2.709125 TTTGTCCTGCCTCGTCGTGG 62.709 60.000 9.00 9.00 0.00 4.94
368 369 0.670546 ATTTGTCCTGCCTCGTCGTG 60.671 55.000 0.00 0.00 0.00 4.35
369 370 0.389948 GATTTGTCCTGCCTCGTCGT 60.390 55.000 0.00 0.00 0.00 4.34
370 371 1.084370 GGATTTGTCCTGCCTCGTCG 61.084 60.000 0.00 0.00 0.00 5.12
371 372 0.250513 AGGATTTGTCCTGCCTCGTC 59.749 55.000 0.00 0.00 38.98 4.20
372 373 0.250513 GAGGATTTGTCCTGCCTCGT 59.749 55.000 0.93 0.00 40.86 4.18
373 374 3.071580 GAGGATTTGTCCTGCCTCG 57.928 57.895 0.93 0.00 40.86 4.63
374 375 1.092345 GCGAGGATTTGTCCTGCCTC 61.092 60.000 0.93 0.00 40.86 4.70
375 376 1.078143 GCGAGGATTTGTCCTGCCT 60.078 57.895 0.93 0.00 40.86 4.75
376 377 1.377202 TGCGAGGATTTGTCCTGCC 60.377 57.895 0.93 0.00 40.86 4.85
377 378 1.648467 GGTGCGAGGATTTGTCCTGC 61.648 60.000 0.93 6.79 40.86 4.85
378 379 0.036010 AGGTGCGAGGATTTGTCCTG 60.036 55.000 0.93 0.00 40.86 3.86
379 380 0.250513 GAGGTGCGAGGATTTGTCCT 59.749 55.000 0.00 0.00 44.06 3.85
380 381 0.744771 GGAGGTGCGAGGATTTGTCC 60.745 60.000 0.00 0.00 0.00 4.02
381 382 0.744771 GGGAGGTGCGAGGATTTGTC 60.745 60.000 0.00 0.00 0.00 3.18
382 383 1.299976 GGGAGGTGCGAGGATTTGT 59.700 57.895 0.00 0.00 0.00 2.83
383 384 0.107017 ATGGGAGGTGCGAGGATTTG 60.107 55.000 0.00 0.00 0.00 2.32
384 385 0.625849 AATGGGAGGTGCGAGGATTT 59.374 50.000 0.00 0.00 0.00 2.17
385 386 1.507140 TAATGGGAGGTGCGAGGATT 58.493 50.000 0.00 0.00 0.00 3.01
386 387 1.507140 TTAATGGGAGGTGCGAGGAT 58.493 50.000 0.00 0.00 0.00 3.24
387 388 1.507140 ATTAATGGGAGGTGCGAGGA 58.493 50.000 0.00 0.00 0.00 3.71
388 389 2.632996 TCTATTAATGGGAGGTGCGAGG 59.367 50.000 0.00 0.00 0.00 4.63
389 390 4.310769 CTTCTATTAATGGGAGGTGCGAG 58.689 47.826 0.00 0.00 0.00 5.03
390 391 3.071023 CCTTCTATTAATGGGAGGTGCGA 59.929 47.826 16.40 0.00 0.00 5.10
391 392 3.181454 ACCTTCTATTAATGGGAGGTGCG 60.181 47.826 26.63 5.46 0.00 5.34
392 393 4.439253 ACCTTCTATTAATGGGAGGTGC 57.561 45.455 26.63 0.00 0.00 5.01
393 394 5.755849 ACAACCTTCTATTAATGGGAGGTG 58.244 41.667 27.59 22.46 0.00 4.00
394 395 5.491078 TGACAACCTTCTATTAATGGGAGGT 59.509 40.000 22.91 22.91 0.00 3.85
395 396 6.001449 TGACAACCTTCTATTAATGGGAGG 57.999 41.667 21.66 21.66 0.00 4.30
396 397 6.884295 TGTTGACAACCTTCTATTAATGGGAG 59.116 38.462 15.59 0.03 0.00 4.30
397 398 6.785076 TGTTGACAACCTTCTATTAATGGGA 58.215 36.000 15.59 0.00 0.00 4.37
398 399 7.393234 TCTTGTTGACAACCTTCTATTAATGGG 59.607 37.037 15.59 0.00 0.00 4.00
399 400 8.335532 TCTTGTTGACAACCTTCTATTAATGG 57.664 34.615 15.59 0.00 0.00 3.16
404 405 9.442047 CTCTTATCTTGTTGACAACCTTCTATT 57.558 33.333 15.59 0.00 0.00 1.73
405 406 8.043710 CCTCTTATCTTGTTGACAACCTTCTAT 58.956 37.037 15.59 5.23 0.00 1.98
406 407 7.386851 CCTCTTATCTTGTTGACAACCTTCTA 58.613 38.462 15.59 0.57 0.00 2.10
407 408 6.234177 CCTCTTATCTTGTTGACAACCTTCT 58.766 40.000 15.59 1.47 0.00 2.85
408 409 5.412904 CCCTCTTATCTTGTTGACAACCTTC 59.587 44.000 15.59 0.00 0.00 3.46
409 410 5.316987 CCCTCTTATCTTGTTGACAACCTT 58.683 41.667 15.59 0.97 0.00 3.50
410 411 4.263506 CCCCTCTTATCTTGTTGACAACCT 60.264 45.833 15.59 1.14 0.00 3.50
411 412 4.010349 CCCCTCTTATCTTGTTGACAACC 58.990 47.826 15.59 0.00 0.00 3.77
412 413 3.440522 GCCCCTCTTATCTTGTTGACAAC 59.559 47.826 11.54 11.54 0.00 3.32
413 414 3.330701 AGCCCCTCTTATCTTGTTGACAA 59.669 43.478 0.00 0.00 0.00 3.18
414 415 2.912956 AGCCCCTCTTATCTTGTTGACA 59.087 45.455 0.00 0.00 0.00 3.58
415 416 3.636153 AGCCCCTCTTATCTTGTTGAC 57.364 47.619 0.00 0.00 0.00 3.18
416 417 3.134804 GCTAGCCCCTCTTATCTTGTTGA 59.865 47.826 2.29 0.00 0.00 3.18
417 418 3.471680 GCTAGCCCCTCTTATCTTGTTG 58.528 50.000 2.29 0.00 0.00 3.33
418 419 2.439880 GGCTAGCCCCTCTTATCTTGTT 59.560 50.000 24.19 0.00 0.00 2.83
419 420 2.050918 GGCTAGCCCCTCTTATCTTGT 58.949 52.381 24.19 0.00 0.00 3.16
420 421 1.001406 CGGCTAGCCCCTCTTATCTTG 59.999 57.143 28.09 5.31 0.00 3.02
421 422 1.343069 CGGCTAGCCCCTCTTATCTT 58.657 55.000 28.09 0.00 0.00 2.40
422 423 0.543174 CCGGCTAGCCCCTCTTATCT 60.543 60.000 28.09 0.00 0.00 1.98
423 424 0.542232 TCCGGCTAGCCCCTCTTATC 60.542 60.000 28.09 0.00 0.00 1.75
424 425 0.105142 TTCCGGCTAGCCCCTCTTAT 60.105 55.000 28.09 0.00 0.00 1.73
425 426 0.105142 ATTCCGGCTAGCCCCTCTTA 60.105 55.000 28.09 8.05 0.00 2.10
426 427 1.384643 ATTCCGGCTAGCCCCTCTT 60.385 57.895 28.09 6.61 0.00 2.85
427 428 1.839296 GATTCCGGCTAGCCCCTCT 60.839 63.158 28.09 10.65 0.00 3.69
428 429 1.696097 TTGATTCCGGCTAGCCCCTC 61.696 60.000 28.09 18.11 0.00 4.30
429 430 1.279025 TTTGATTCCGGCTAGCCCCT 61.279 55.000 28.09 9.89 0.00 4.79
430 431 0.819666 CTTTGATTCCGGCTAGCCCC 60.820 60.000 28.09 12.21 0.00 5.80
431 432 1.448119 GCTTTGATTCCGGCTAGCCC 61.448 60.000 28.09 13.89 0.00 5.19
432 433 0.464554 AGCTTTGATTCCGGCTAGCC 60.465 55.000 24.75 24.75 32.94 3.93
433 434 2.240493 TAGCTTTGATTCCGGCTAGC 57.760 50.000 6.04 6.04 36.40 3.42
434 435 4.130118 ACAATAGCTTTGATTCCGGCTAG 58.870 43.478 13.35 0.00 40.01 3.42
435 436 4.150897 ACAATAGCTTTGATTCCGGCTA 57.849 40.909 13.35 0.00 40.75 3.93
436 437 3.004752 ACAATAGCTTTGATTCCGGCT 57.995 42.857 13.35 0.00 38.62 5.52
437 438 3.128589 TCAACAATAGCTTTGATTCCGGC 59.871 43.478 13.35 0.00 0.00 6.13
438 439 4.396166 AGTCAACAATAGCTTTGATTCCGG 59.604 41.667 13.35 0.00 34.34 5.14
439 440 5.551760 AGTCAACAATAGCTTTGATTCCG 57.448 39.130 13.35 0.00 34.34 4.30
440 441 7.849804 TCTAGTCAACAATAGCTTTGATTCC 57.150 36.000 13.35 0.00 34.34 3.01
441 442 9.323985 AGATCTAGTCAACAATAGCTTTGATTC 57.676 33.333 13.35 0.00 34.34 2.52
444 445 9.809096 CTTAGATCTAGTCAACAATAGCTTTGA 57.191 33.333 13.35 5.26 0.00 2.69
445 446 9.039870 CCTTAGATCTAGTCAACAATAGCTTTG 57.960 37.037 2.02 0.00 0.00 2.77
446 447 8.982723 TCCTTAGATCTAGTCAACAATAGCTTT 58.017 33.333 2.02 0.00 0.00 3.51
447 448 8.540507 TCCTTAGATCTAGTCAACAATAGCTT 57.459 34.615 2.02 0.00 0.00 3.74
448 449 7.232534 CCTCCTTAGATCTAGTCAACAATAGCT 59.767 40.741 2.02 0.00 0.00 3.32
449 450 7.231722 TCCTCCTTAGATCTAGTCAACAATAGC 59.768 40.741 2.02 0.00 0.00 2.97
450 451 8.698973 TCCTCCTTAGATCTAGTCAACAATAG 57.301 38.462 2.02 0.00 0.00 1.73
451 452 7.231722 GCTCCTCCTTAGATCTAGTCAACAATA 59.768 40.741 2.02 0.00 0.00 1.90
452 453 6.041523 GCTCCTCCTTAGATCTAGTCAACAAT 59.958 42.308 2.02 0.00 0.00 2.71
453 454 5.361285 GCTCCTCCTTAGATCTAGTCAACAA 59.639 44.000 2.02 0.00 0.00 2.83
454 455 4.890581 GCTCCTCCTTAGATCTAGTCAACA 59.109 45.833 2.02 0.00 0.00 3.33
455 456 5.009610 CAGCTCCTCCTTAGATCTAGTCAAC 59.990 48.000 2.02 0.00 0.00 3.18
456 457 5.136828 CAGCTCCTCCTTAGATCTAGTCAA 58.863 45.833 2.02 0.00 0.00 3.18
457 458 4.447034 CCAGCTCCTCCTTAGATCTAGTCA 60.447 50.000 2.02 0.00 0.00 3.41
458 459 4.079253 CCAGCTCCTCCTTAGATCTAGTC 58.921 52.174 2.02 0.00 0.00 2.59
459 460 3.753846 GCCAGCTCCTCCTTAGATCTAGT 60.754 52.174 2.02 0.00 0.00 2.57
460 461 2.825532 GCCAGCTCCTCCTTAGATCTAG 59.174 54.545 2.02 0.00 0.00 2.43
461 462 2.491825 GGCCAGCTCCTCCTTAGATCTA 60.492 54.545 0.00 0.00 0.00 1.98
462 463 1.715785 GCCAGCTCCTCCTTAGATCT 58.284 55.000 0.00 0.00 0.00 2.75
463 464 0.684535 GGCCAGCTCCTCCTTAGATC 59.315 60.000 0.00 0.00 0.00 2.75
464 465 0.030705 TGGCCAGCTCCTCCTTAGAT 60.031 55.000 0.00 0.00 0.00 1.98
465 466 0.978146 GTGGCCAGCTCCTCCTTAGA 60.978 60.000 5.11 0.00 0.00 2.10
466 467 1.524482 GTGGCCAGCTCCTCCTTAG 59.476 63.158 5.11 0.00 0.00 2.18
467 468 1.995626 GGTGGCCAGCTCCTCCTTA 60.996 63.158 27.63 0.00 36.94 2.69
468 469 3.334054 GGTGGCCAGCTCCTCCTT 61.334 66.667 27.63 0.00 36.94 3.36
469 470 4.664267 TGGTGGCCAGCTCCTCCT 62.664 66.667 33.29 0.00 39.79 3.69
470 471 3.650950 TTGGTGGCCAGCTCCTCC 61.651 66.667 33.29 18.05 39.58 4.30
471 472 2.360475 GTTGGTGGCCAGCTCCTC 60.360 66.667 33.29 17.48 33.81 3.71
472 473 3.971702 GGTTGGTGGCCAGCTCCT 61.972 66.667 33.29 0.00 35.07 3.69
473 474 4.284550 TGGTTGGTGGCCAGCTCC 62.285 66.667 33.29 30.98 35.07 4.70
474 475 2.674380 CTGGTTGGTGGCCAGCTC 60.674 66.667 33.29 24.69 45.72 4.09
479 480 4.603535 AGTGGCTGGTTGGTGGCC 62.604 66.667 0.00 0.00 45.45 5.36
480 481 2.985847 GAGTGGCTGGTTGGTGGC 60.986 66.667 0.00 0.00 0.00 5.01
481 482 2.669569 CGAGTGGCTGGTTGGTGG 60.670 66.667 0.00 0.00 0.00 4.61
493 494 0.307760 GTTCTTTGGTGGTGCGAGTG 59.692 55.000 0.00 0.00 0.00 3.51
494 495 1.157870 CGTTCTTTGGTGGTGCGAGT 61.158 55.000 0.00 0.00 0.00 4.18
495 496 1.569493 CGTTCTTTGGTGGTGCGAG 59.431 57.895 0.00 0.00 0.00 5.03
496 497 2.539338 GCGTTCTTTGGTGGTGCGA 61.539 57.895 0.00 0.00 0.00 5.10
497 498 2.051345 GCGTTCTTTGGTGGTGCG 60.051 61.111 0.00 0.00 0.00 5.34
498 499 2.130073 GAGGCGTTCTTTGGTGGTGC 62.130 60.000 0.00 0.00 0.00 5.01
499 500 1.515521 GGAGGCGTTCTTTGGTGGTG 61.516 60.000 0.00 0.00 0.00 4.17
515 516 2.095567 CCTTCATCAAACGTTGCAGGAG 60.096 50.000 0.00 0.00 0.00 3.69
525 526 1.135859 CGCAGTGAGCCTTCATCAAAC 60.136 52.381 0.00 0.00 41.38 2.93
528 529 1.078918 CCGCAGTGAGCCTTCATCA 60.079 57.895 0.00 0.00 41.38 3.07
529 530 2.467826 GCCGCAGTGAGCCTTCATC 61.468 63.158 0.00 0.00 41.38 2.92
530 531 2.437359 GCCGCAGTGAGCCTTCAT 60.437 61.111 0.00 0.00 41.38 2.57
531 532 4.704833 GGCCGCAGTGAGCCTTCA 62.705 66.667 15.44 0.00 46.14 3.02
552 553 2.256591 CGATGCCACCAGCCTATGC 61.257 63.158 0.00 0.00 42.71 3.14
555 556 0.969149 CTATCGATGCCACCAGCCTA 59.031 55.000 8.54 0.00 42.71 3.93
560 561 1.683385 CTCAGACTATCGATGCCACCA 59.317 52.381 8.54 0.00 0.00 4.17
561 562 1.000283 CCTCAGACTATCGATGCCACC 60.000 57.143 8.54 0.00 0.00 4.61
566 567 1.198867 CGCTCCCTCAGACTATCGATG 59.801 57.143 8.54 0.52 0.00 3.84
567 568 1.529226 CGCTCCCTCAGACTATCGAT 58.471 55.000 2.16 2.16 0.00 3.59
568 569 0.535328 CCGCTCCCTCAGACTATCGA 60.535 60.000 0.00 0.00 0.00 3.59
572 573 2.626255 ATCGCCGCTCCCTCAGACTA 62.626 60.000 0.00 0.00 0.00 2.59
576 577 4.598894 CCATCGCCGCTCCCTCAG 62.599 72.222 0.00 0.00 0.00 3.35
586 587 1.339727 ACACTTAGGTTTCCCATCGCC 60.340 52.381 0.00 0.00 0.00 5.54
589 590 3.434940 ACCACACTTAGGTTTCCCATC 57.565 47.619 0.00 0.00 35.33 3.51
591 592 2.039348 GCTACCACACTTAGGTTTCCCA 59.961 50.000 0.00 0.00 40.54 4.37
596 597 0.036671 GCCGCTACCACACTTAGGTT 60.037 55.000 0.00 0.00 40.54 3.50
601 602 0.391661 CTCATGCCGCTACCACACTT 60.392 55.000 0.00 0.00 0.00 3.16
605 606 2.464459 GCACTCATGCCGCTACCAC 61.464 63.158 0.00 0.00 46.97 4.16
616 617 3.402681 CGACCTGGGGGCACTCAT 61.403 66.667 0.00 0.00 35.63 2.90
653 654 0.327480 ATGGGGTGAGGCCATGACTA 60.327 55.000 5.01 0.00 39.65 2.59
658 659 2.704424 GGGAATGGGGTGAGGCCAT 61.704 63.158 5.01 0.00 39.65 4.40
659 660 3.346734 GGGAATGGGGTGAGGCCA 61.347 66.667 5.01 0.00 39.65 5.36
662 663 0.921256 AGAAGGGGAATGGGGTGAGG 60.921 60.000 0.00 0.00 0.00 3.86
671 672 1.205055 GGTCGAGGAAGAAGGGGAAT 58.795 55.000 0.00 0.00 0.00 3.01
687 688 4.164221 TGATGGGAAAGAGATAGTTGGGTC 59.836 45.833 0.00 0.00 0.00 4.46
698 699 6.127619 GGAGGTAACAAAATGATGGGAAAGAG 60.128 42.308 0.00 0.00 41.41 2.85
708 709 4.079253 GAGGCAAGGAGGTAACAAAATGA 58.921 43.478 0.00 0.00 41.41 2.57
716 717 2.840511 TGGTATGAGGCAAGGAGGTAA 58.159 47.619 0.00 0.00 0.00 2.85
718 719 1.771255 GATGGTATGAGGCAAGGAGGT 59.229 52.381 0.00 0.00 0.00 3.85
734 735 9.448438 TGATTATTATGGAAAATCTACCGATGG 57.552 33.333 0.00 0.00 32.12 3.51
783 818 9.469807 CGCATATACTATCAAGGGATAATTCTC 57.530 37.037 0.00 0.00 35.64 2.87
784 819 9.201989 TCGCATATACTATCAAGGGATAATTCT 57.798 33.333 0.00 0.00 35.64 2.40
788 823 9.599866 CAATTCGCATATACTATCAAGGGATAA 57.400 33.333 0.00 0.00 35.64 1.75
789 824 7.710907 GCAATTCGCATATACTATCAAGGGATA 59.289 37.037 0.00 0.00 41.79 2.59
791 826 5.874810 GCAATTCGCATATACTATCAAGGGA 59.125 40.000 0.00 0.00 41.79 4.20
792 827 5.877012 AGCAATTCGCATATACTATCAAGGG 59.123 40.000 3.32 0.00 46.13 3.95
793 828 6.974932 AGCAATTCGCATATACTATCAAGG 57.025 37.500 3.32 0.00 46.13 3.61
820 865 9.725019 CAGCCCAAGATAACAAACTGATATATA 57.275 33.333 0.00 0.00 0.00 0.86
833 887 2.945668 AGCGATTTCAGCCCAAGATAAC 59.054 45.455 0.00 0.00 34.64 1.89
836 890 2.134789 AAGCGATTTCAGCCCAAGAT 57.865 45.000 0.00 0.00 34.64 2.40
837 891 1.909700 AAAGCGATTTCAGCCCAAGA 58.090 45.000 0.00 0.00 34.64 3.02
838 892 2.730550 AAAAGCGATTTCAGCCCAAG 57.269 45.000 0.00 0.00 34.64 3.61
896 959 3.748568 CCGGACTCTTTTTCTTTCCTCTG 59.251 47.826 0.00 0.00 0.00 3.35
898 961 2.484651 GCCGGACTCTTTTTCTTTCCTC 59.515 50.000 5.05 0.00 0.00 3.71
1786 1965 5.221561 CGATGGTAGGGTACAACAATATGGA 60.222 44.000 0.00 0.00 0.00 3.41
1841 2020 1.968017 AGCACCCATGTCGCAACAG 60.968 57.895 0.00 0.00 39.20 3.16
2375 2720 3.064958 CACATGAGCAAGAATTCATCGCT 59.935 43.478 14.00 14.00 31.91 4.93
2380 2725 5.771153 TTGTTCACATGAGCAAGAATTCA 57.229 34.783 8.44 0.00 39.71 2.57
2509 2855 0.859232 CAAACACGAGACCAGAACCG 59.141 55.000 0.00 0.00 0.00 4.44
2532 2878 4.551702 GGGTCCAAAAGCCAACAATAAT 57.448 40.909 0.00 0.00 45.43 1.28
2633 4388 2.158971 ACCACAAATGTTCCAAACAGGC 60.159 45.455 0.00 0.00 45.95 4.85
2732 4491 6.038985 CGGTTCTCTATATAGGATGCATGTG 58.961 44.000 2.46 0.00 0.00 3.21
2749 4508 4.148891 CGTTATCTTTTGCAACGGTTCTC 58.851 43.478 0.00 0.00 40.90 2.87
2761 4520 4.243270 CTCTTCGACCACCGTTATCTTTT 58.757 43.478 0.00 0.00 39.75 2.27
2905 4668 1.084289 GTTTATCCTGCGGCGAAACT 58.916 50.000 12.98 0.00 30.05 2.66
3025 6547 4.847255 GCTGCCAGCTGTAAAACG 57.153 55.556 13.81 0.00 38.45 3.60
3104 6627 7.644986 AATGCAGCTTCTAACGATATAACTC 57.355 36.000 0.00 0.00 0.00 3.01
3105 6628 7.599245 GGTAATGCAGCTTCTAACGATATAACT 59.401 37.037 0.00 0.00 0.00 2.24
3113 6636 3.521560 TCAGGTAATGCAGCTTCTAACG 58.478 45.455 0.00 0.00 30.72 3.18
3127 6650 4.410228 AGCAAGAATAGATGGCTCAGGTAA 59.590 41.667 0.00 0.00 0.00 2.85
3168 6694 3.913799 TCCACCACAAAGAAATCCTCCTA 59.086 43.478 0.00 0.00 0.00 2.94
3235 6761 0.250513 AGGCTTCAGAGTTAAGGGCG 59.749 55.000 0.00 0.00 0.00 6.13
3301 6831 7.362920 GGTCTCTAAAATTTGCAGGCTCAATAA 60.363 37.037 0.00 0.00 0.00 1.40
3303 6833 5.105595 GGTCTCTAAAATTTGCAGGCTCAAT 60.106 40.000 0.00 0.00 0.00 2.57
3304 6834 4.218417 GGTCTCTAAAATTTGCAGGCTCAA 59.782 41.667 0.00 0.00 0.00 3.02
3306 6836 4.013050 AGGTCTCTAAAATTTGCAGGCTC 58.987 43.478 0.00 0.00 0.00 4.70
3307 6837 4.039603 AGGTCTCTAAAATTTGCAGGCT 57.960 40.909 0.00 0.00 0.00 4.58
3308 6838 4.790765 AAGGTCTCTAAAATTTGCAGGC 57.209 40.909 0.00 0.00 0.00 4.85
3309 6839 6.331369 TCAAAGGTCTCTAAAATTTGCAGG 57.669 37.500 0.00 0.00 32.28 4.85
3311 6841 9.612066 AAAATTCAAAGGTCTCTAAAATTTGCA 57.388 25.926 0.00 0.00 32.28 4.08
3317 6847 7.717875 TCCTCGAAAATTCAAAGGTCTCTAAAA 59.282 33.333 9.95 0.00 33.65 1.52
3331 6862 8.400186 TCGGGTTAATTTAATCCTCGAAAATTC 58.600 33.333 14.93 0.00 36.78 2.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.