Multiple sequence alignment - TraesCS6A01G019300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G019300 chr6A 100.000 4693 0 0 1 4693 9316026 9320718 0.000000e+00 8667.0
1 TraesCS6A01G019300 chr6A 90.657 578 29 4 2 558 9249757 9250330 0.000000e+00 745.0
2 TraesCS6A01G019300 chr6A 86.317 687 41 20 798 1463 9250808 9251462 0.000000e+00 699.0
3 TraesCS6A01G019300 chr6A 88.750 160 9 4 556 714 9250640 9250791 2.230000e-43 187.0
4 TraesCS6A01G019300 chr6D 88.904 2154 143 37 781 2859 8674102 8671970 0.000000e+00 2566.0
5 TraesCS6A01G019300 chr6D 90.060 503 31 10 4196 4693 8670704 8670216 6.620000e-178 634.0
6 TraesCS6A01G019300 chr6D 81.646 790 105 18 2914 3697 8671967 8671212 1.860000e-173 619.0
7 TraesCS6A01G019300 chr6D 94.048 336 17 3 2 335 8680235 8679901 1.510000e-139 507.0
8 TraesCS6A01G019300 chr6D 97.727 88 2 0 556 643 8676594 8676507 8.130000e-33 152.0
9 TraesCS6A01G019300 chr6D 97.561 41 1 0 752 792 8674157 8674117 2.340000e-08 71.3
10 TraesCS6A01G019300 chr6B 88.594 1771 112 44 808 2504 15793531 15791777 0.000000e+00 2069.0
11 TraesCS6A01G019300 chr6B 89.650 1227 98 20 2492 3697 15791644 15790426 0.000000e+00 1535.0
12 TraesCS6A01G019300 chr6B 86.176 340 36 5 4336 4675 15790087 15789759 1.610000e-94 357.0
13 TraesCS6A01G019300 chr2D 77.152 604 85 37 993 1581 74128968 74129533 7.630000e-78 302.0
14 TraesCS6A01G019300 chr2D 75.584 385 68 15 2957 3336 74130808 74131171 2.900000e-37 167.0
15 TraesCS6A01G019300 chr2B 78.776 490 62 29 993 1451 113262803 113263281 1.650000e-74 291.0
16 TraesCS6A01G019300 chr2B 77.966 413 58 14 2055 2462 113263991 113264375 1.310000e-55 228.0
17 TraesCS6A01G019300 chr2B 83.636 165 27 0 2957 3121 113264667 113264831 6.290000e-34 156.0
18 TraesCS6A01G019300 chr2A 78.675 483 63 28 993 1447 73521151 73521621 7.690000e-73 285.0
19 TraesCS6A01G019300 chr2A 77.724 413 59 18 2055 2462 73522080 73522464 6.110000e-54 222.0
20 TraesCS6A01G019300 chr2A 75.584 385 68 16 2957 3336 73522756 73523119 2.900000e-37 167.0
21 TraesCS6A01G019300 chr7A 100.000 28 0 0 851 878 727897558 727897585 8.000000e-03 52.8
22 TraesCS6A01G019300 chr5B 100.000 28 0 0 853 880 344317616 344317589 8.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G019300 chr6A 9316026 9320718 4692 False 8667.000000 8667 100.000000 1 4693 1 chr6A.!!$F1 4692
1 TraesCS6A01G019300 chr6A 9249757 9251462 1705 False 543.666667 745 88.574667 2 1463 3 chr6A.!!$F2 1461
2 TraesCS6A01G019300 chr6D 8670216 8680235 10019 True 758.216667 2566 91.657667 2 4693 6 chr6D.!!$R1 4691
3 TraesCS6A01G019300 chr6B 15789759 15793531 3772 True 1320.333333 2069 88.140000 808 4675 3 chr6B.!!$R1 3867
4 TraesCS6A01G019300 chr2D 74128968 74131171 2203 False 234.500000 302 76.368000 993 3336 2 chr2D.!!$F1 2343
5 TraesCS6A01G019300 chr2B 113262803 113264831 2028 False 225.000000 291 80.126000 993 3121 3 chr2B.!!$F1 2128
6 TraesCS6A01G019300 chr2A 73521151 73523119 1968 False 224.666667 285 77.327667 993 3336 3 chr2A.!!$F1 2343

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
692 6079 0.613260 ACATTTAGGCCTGCTCGTGA 59.387 50.0 17.99 0.0 0.00 4.35 F
1097 6549 0.623324 CACCCCCTCAACCCTATCCA 60.623 60.0 0.00 0.0 0.00 3.41 F
1339 6879 0.813610 TCTTTCCGTGCCTGTGTGTG 60.814 55.0 0.00 0.0 0.00 3.82 F
2362 8080 0.979665 CTGGAAGCAGACCTGAAGGA 59.020 55.0 2.62 0.0 38.94 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1805 7425 0.328258 TCTGGAAAGCCTACCCAAGC 59.672 55.000 0.0 0.0 34.31 4.01 R
2824 8727 1.522668 TGGAATGTTCTGCCAAGTCG 58.477 50.000 0.0 0.0 0.00 4.18 R
3054 8969 1.734465 GATATGAGTAGCGGGCATTGC 59.266 52.381 0.0 0.0 0.00 3.56 R
3759 9706 0.174162 AAAATGATGAGCGGGCAAGC 59.826 50.000 0.0 0.0 37.41 4.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
64 66 6.479990 TCGGATAGATCATTTGTCATGTTGTC 59.520 38.462 0.00 0.00 0.00 3.18
168 170 8.905702 GCAATATACTCTTGTTTTGTTTGTCAG 58.094 33.333 0.00 0.00 0.00 3.51
176 178 7.693952 TCTTGTTTTGTTTGTCAGCTAACTAG 58.306 34.615 0.00 0.00 32.83 2.57
202 204 6.791887 AATACTCATGTCATCTATTTGCCG 57.208 37.500 0.00 0.00 0.00 5.69
212 214 3.757745 TCTATTTGCCGCAAAAGTAGC 57.242 42.857 21.80 0.00 36.90 3.58
261 264 8.546597 AACCATTTATGATAACAAAGGCAAAC 57.453 30.769 0.00 0.00 0.00 2.93
356 379 1.065854 AGGGGATGAGTTTCGCAGAAG 60.066 52.381 0.00 0.00 45.90 2.85
380 403 7.331026 AGTTTGCTGATACTATTGCACTCTAA 58.669 34.615 0.00 0.00 35.01 2.10
426 561 0.960364 TCCGACCATTTCAAGGCTGC 60.960 55.000 0.00 0.00 0.00 5.25
427 562 1.243342 CCGACCATTTCAAGGCTGCA 61.243 55.000 0.50 0.00 0.00 4.41
435 570 0.752054 TTCAAGGCTGCAGTTTTGGG 59.248 50.000 23.22 8.53 0.00 4.12
466 787 8.940768 AGCACGGTTTATAAAAATGCATATTT 57.059 26.923 22.05 0.16 38.11 1.40
589 3682 4.380531 TGAGCAAGTTTGACTTAGGACAG 58.619 43.478 0.00 0.00 36.03 3.51
669 5080 6.805713 ACTTCAAAGTTTGGACACTTTATGG 58.194 36.000 15.47 0.00 43.75 2.74
689 6076 2.159379 GGAAAACATTTAGGCCTGCTCG 60.159 50.000 17.99 3.80 0.00 5.03
692 6079 0.613260 ACATTTAGGCCTGCTCGTGA 59.387 50.000 17.99 0.00 0.00 4.35
701 6088 2.544267 GGCCTGCTCGTGATGTATTAAC 59.456 50.000 0.00 0.00 0.00 2.01
710 6097 8.194769 TGCTCGTGATGTATTAACTAATCAGAA 58.805 33.333 0.00 0.00 30.00 3.02
711 6098 9.031360 GCTCGTGATGTATTAACTAATCAGAAA 57.969 33.333 0.00 0.00 30.00 2.52
792 6179 4.580868 GAAGACCTTTCTACCCCTCTTTG 58.419 47.826 0.00 0.00 0.00 2.77
794 6181 3.328050 AGACCTTTCTACCCCTCTTTGTG 59.672 47.826 0.00 0.00 0.00 3.33
795 6182 3.323775 ACCTTTCTACCCCTCTTTGTGA 58.676 45.455 0.00 0.00 0.00 3.58
796 6183 3.720002 ACCTTTCTACCCCTCTTTGTGAA 59.280 43.478 0.00 0.00 0.00 3.18
797 6184 4.072839 CCTTTCTACCCCTCTTTGTGAAC 58.927 47.826 0.00 0.00 0.00 3.18
798 6185 3.782656 TTCTACCCCTCTTTGTGAACC 57.217 47.619 0.00 0.00 0.00 3.62
799 6186 1.982958 TCTACCCCTCTTTGTGAACCC 59.017 52.381 0.00 0.00 0.00 4.11
934 6348 1.617947 ATCGAGCCTCAACTCACCCC 61.618 60.000 0.00 0.00 36.42 4.95
950 6391 2.283809 CCCTCTCCCAGATCCGGT 59.716 66.667 0.00 0.00 0.00 5.28
1097 6549 0.623324 CACCCCCTCAACCCTATCCA 60.623 60.000 0.00 0.00 0.00 3.41
1331 6840 2.035321 TCACCATTTTTCTTTCCGTGCC 59.965 45.455 0.00 0.00 0.00 5.01
1339 6879 0.813610 TCTTTCCGTGCCTGTGTGTG 60.814 55.000 0.00 0.00 0.00 3.82
1340 6880 1.078072 TTTCCGTGCCTGTGTGTGT 60.078 52.632 0.00 0.00 0.00 3.72
1341 6881 1.372838 TTTCCGTGCCTGTGTGTGTG 61.373 55.000 0.00 0.00 0.00 3.82
1342 6882 3.952675 CCGTGCCTGTGTGTGTGC 61.953 66.667 0.00 0.00 0.00 4.57
1431 6972 2.094659 ATCAAGTTCGCGCAGGTCG 61.095 57.895 8.75 0.00 42.12 4.79
1478 7019 5.561993 GCATATATCTACCTCGTTCGAGTC 58.438 45.833 18.59 0.00 0.00 3.36
1489 7031 4.799428 CCTCGTTCGAGTCTAGGATTTTTC 59.201 45.833 18.59 0.00 0.00 2.29
1504 7046 1.344065 TTTTCGCTCCCTCTGTGGTA 58.656 50.000 0.00 0.00 0.00 3.25
1549 7091 3.131478 ATGGTTTGCCGCGGTAGC 61.131 61.111 28.70 21.08 37.67 3.58
1727 7339 3.587797 TCTACTGGACAATCGGTGTTC 57.412 47.619 0.00 0.00 41.96 3.18
1728 7340 2.094906 TCTACTGGACAATCGGTGTTCG 60.095 50.000 0.00 0.00 41.96 3.95
1749 7362 2.369394 GTGCTTCTGTATTTGAGGGGG 58.631 52.381 0.00 0.00 0.00 5.40
1760 7376 8.288812 TCTGTATTTGAGGGGGAAATATTTGAT 58.711 33.333 5.17 0.00 30.10 2.57
1805 7425 2.093235 GGAAGTGAGTGAGGAAGGATGG 60.093 54.545 0.00 0.00 0.00 3.51
1827 7447 1.668826 TGGGTAGGCTTTCCAGATGT 58.331 50.000 0.00 0.00 33.74 3.06
1828 7448 1.281867 TGGGTAGGCTTTCCAGATGTG 59.718 52.381 0.00 0.00 33.74 3.21
1844 7467 7.167535 TCCAGATGTGAAATTCAGTAATGTCA 58.832 34.615 0.00 0.00 37.06 3.58
1884 7516 2.000447 GTGCGCTTTACTTGGGACTAG 59.000 52.381 9.73 0.00 0.00 2.57
2022 7707 1.154430 TTGCCCCAACTACCCTTCTT 58.846 50.000 0.00 0.00 0.00 2.52
2023 7708 1.154430 TGCCCCAACTACCCTTCTTT 58.846 50.000 0.00 0.00 0.00 2.52
2024 7709 1.074889 TGCCCCAACTACCCTTCTTTC 59.925 52.381 0.00 0.00 0.00 2.62
2026 7711 2.490168 GCCCCAACTACCCTTCTTTCAA 60.490 50.000 0.00 0.00 0.00 2.69
2032 7717 6.548251 CCCAACTACCCTTCTTTCAAGTTTTA 59.452 38.462 0.00 0.00 0.00 1.52
2047 7732 7.883391 TCAAGTTTTAAAGTGTGGTAATGGA 57.117 32.000 0.00 0.00 0.00 3.41
2053 7746 8.357402 GTTTTAAAGTGTGGTAATGGATCTGTT 58.643 33.333 0.00 0.00 0.00 3.16
2165 7858 6.154706 GTCTTCTGGATACCAAGGAGAAACTA 59.845 42.308 0.00 0.00 30.80 2.24
2183 7876 7.610865 AGAAACTAGAAGTCAGGAGAAATGAG 58.389 38.462 0.00 0.00 0.00 2.90
2362 8080 0.979665 CTGGAAGCAGACCTGAAGGA 59.020 55.000 2.62 0.00 38.94 3.36
2363 8081 1.349026 CTGGAAGCAGACCTGAAGGAA 59.651 52.381 2.62 0.00 38.94 3.36
2427 8145 4.132336 CCACACCATCATATGAACTCCAG 58.868 47.826 9.99 1.03 0.00 3.86
2444 8162 8.325787 TGAACTCCAGCAAGAGGTTAATATTTA 58.674 33.333 7.79 0.00 38.26 1.40
2508 8389 9.573133 CAAAAGTTGGTCATAATTTACTCATCC 57.427 33.333 0.00 0.00 0.00 3.51
2657 8542 6.940867 ACTAAAAGGGGCAAACTAGTTAAGAG 59.059 38.462 8.92 0.97 0.00 2.85
2684 8569 8.778358 GTTTTATCAGATCCTACAGGCATTTAG 58.222 37.037 0.00 0.00 34.44 1.85
2824 8727 4.823442 TCTGTGCATCAATGTGGATATTCC 59.177 41.667 0.00 0.00 36.96 3.01
2835 8738 2.115427 TGGATATTCCGACTTGGCAGA 58.885 47.619 0.00 0.00 40.17 4.26
2970 8885 6.657541 CCTAAAAGCCTAGAACAATACAACCA 59.342 38.462 0.00 0.00 0.00 3.67
3054 8969 5.500234 TCATCTTCAGGGAATACACAAAGG 58.500 41.667 0.00 0.00 0.00 3.11
3271 9191 4.756084 ACTTCAATCAGTTAAGCTGCAC 57.244 40.909 1.02 0.00 44.66 4.57
3342 9265 2.941720 GAGCAGGGCAAAATCTCTACTG 59.058 50.000 0.00 0.00 0.00 2.74
3350 9273 5.167218 GCAAAATCTCTACTGCCTCATTC 57.833 43.478 0.00 0.00 0.00 2.67
3352 9275 5.448360 GCAAAATCTCTACTGCCTCATTCAC 60.448 44.000 0.00 0.00 0.00 3.18
3353 9276 3.724508 ATCTCTACTGCCTCATTCACG 57.275 47.619 0.00 0.00 0.00 4.35
3354 9277 2.447443 TCTCTACTGCCTCATTCACGT 58.553 47.619 0.00 0.00 0.00 4.49
3356 9279 4.014406 TCTCTACTGCCTCATTCACGTTA 58.986 43.478 0.00 0.00 0.00 3.18
3357 9280 4.096532 TCTCTACTGCCTCATTCACGTTAG 59.903 45.833 0.00 0.00 0.00 2.34
3358 9281 3.762288 TCTACTGCCTCATTCACGTTAGT 59.238 43.478 0.00 0.00 0.00 2.24
3370 9293 3.503827 CACGTTAGTGCAGGAGACATA 57.496 47.619 0.00 0.00 41.94 2.29
3391 9314 8.040716 ACATAAATCTTTAGGAGTTTCCAACG 57.959 34.615 1.73 0.00 39.61 4.10
3394 9317 7.576861 AAATCTTTAGGAGTTTCCAACGAAA 57.423 32.000 0.00 0.00 39.61 3.46
3449 9375 5.632959 TCGTTCCGTTAATAAAATGCCTTG 58.367 37.500 0.00 0.00 0.00 3.61
3498 9425 1.532343 CGTCCGAGTCGATGAATGCG 61.532 60.000 15.64 0.22 0.00 4.73
3504 9431 4.086860 TCGATGAATGCGACCGTG 57.913 55.556 0.00 0.00 32.09 4.94
3507 9434 0.025001 CGATGAATGCGACCGTGAAC 59.975 55.000 0.00 0.00 0.00 3.18
3513 9440 0.172803 ATGCGACCGTGAACCTAGTC 59.827 55.000 0.00 0.00 0.00 2.59
3516 9443 1.162698 CGACCGTGAACCTAGTCAGA 58.837 55.000 0.00 0.00 0.00 3.27
3538 9465 6.756074 CAGACAGAAGCTTGATAAGGTAAGAG 59.244 42.308 2.10 0.00 38.49 2.85
3543 9470 8.637986 CAGAAGCTTGATAAGGTAAGAGTATCT 58.362 37.037 2.10 0.00 43.62 1.98
3544 9471 8.637986 AGAAGCTTGATAAGGTAAGAGTATCTG 58.362 37.037 2.10 0.00 41.57 2.90
3545 9472 7.213678 AAGCTTGATAAGGTAAGAGTATCTGC 58.786 38.462 0.00 0.00 41.57 4.26
3546 9473 7.949119 AAGCTTGATAAGGTAAGAGTATCTGCG 60.949 40.741 0.00 0.00 41.57 5.18
3561 9488 6.212235 AGTATCTGCGTCATCTATCACTTTG 58.788 40.000 0.00 0.00 0.00 2.77
3562 9489 3.785486 TCTGCGTCATCTATCACTTTGG 58.215 45.455 0.00 0.00 0.00 3.28
3591 9518 3.624777 AGCCACATGGATGACCTAAAAG 58.375 45.455 0.87 0.00 37.39 2.27
3594 9521 4.380867 GCCACATGGATGACCTAAAAGTTG 60.381 45.833 0.87 0.00 37.39 3.16
3596 9523 3.763897 ACATGGATGACCTAAAAGTTGCC 59.236 43.478 0.00 0.00 37.04 4.52
3597 9524 2.802719 TGGATGACCTAAAAGTTGCCC 58.197 47.619 0.00 0.00 37.04 5.36
3607 9534 7.070074 TGACCTAAAAGTTGCCCTTTCAAAATA 59.930 33.333 0.00 0.00 42.62 1.40
3608 9535 7.441836 ACCTAAAAGTTGCCCTTTCAAAATAG 58.558 34.615 0.00 0.00 42.62 1.73
3626 9554 3.077519 GCAGATACAGTCCGGCGGT 62.078 63.158 27.32 9.18 0.00 5.68
3629 9557 0.968901 AGATACAGTCCGGCGGTGAA 60.969 55.000 27.32 3.11 0.00 3.18
3635 9563 1.301479 GTCCGGCGGTGAAACTTCT 60.301 57.895 27.32 0.00 36.74 2.85
3644 9572 1.200948 GGTGAAACTTCTGATGCTGCC 59.799 52.381 0.00 0.00 36.74 4.85
3666 9594 1.861542 CGCCGCATCCAAGAAACCAA 61.862 55.000 0.00 0.00 0.00 3.67
3674 9602 1.202722 TCCAAGAAACCAAGGGTCGAC 60.203 52.381 7.13 7.13 33.12 4.20
3698 9626 3.680789 CCGAAGGCGTATTTGAATCAAC 58.319 45.455 0.00 0.00 46.14 3.18
3701 9629 2.014128 AGGCGTATTTGAATCAACGGG 58.986 47.619 7.87 0.00 35.93 5.28
3706 9634 4.587306 CGTATTTGAATCAACGGGTGATG 58.413 43.478 9.70 0.00 46.80 3.07
3710 9638 1.003003 TGAATCAACGGGTGATGCAGA 59.997 47.619 12.79 0.00 45.97 4.26
3711 9639 2.083774 GAATCAACGGGTGATGCAGAA 58.916 47.619 9.70 0.00 46.80 3.02
3712 9640 1.453155 ATCAACGGGTGATGCAGAAC 58.547 50.000 7.93 0.00 45.69 3.01
3713 9641 0.948623 TCAACGGGTGATGCAGAACG 60.949 55.000 0.00 0.00 0.00 3.95
3715 9643 1.227999 AACGGGTGATGCAGAACGTG 61.228 55.000 0.00 0.00 34.54 4.49
3723 9651 2.474712 GCAGAACGTGCGTTAGGC 59.525 61.111 10.05 12.36 43.99 3.93
3728 9656 0.449993 GAACGTGCGTTAGGCGTTTC 60.450 55.000 10.05 0.00 46.74 2.78
3729 9657 2.149606 AACGTGCGTTAGGCGTTTCG 62.150 55.000 8.28 0.00 44.89 3.46
3734 9662 2.067459 GCGTTAGGCGTTTCGTATTG 57.933 50.000 0.00 0.00 43.66 1.90
3735 9663 1.849348 GCGTTAGGCGTTTCGTATTGC 60.849 52.381 0.00 0.00 43.66 3.56
3736 9664 1.657094 CGTTAGGCGTTTCGTATTGCT 59.343 47.619 0.00 0.00 35.54 3.91
3739 9667 2.611974 AGGCGTTTCGTATTGCTTTG 57.388 45.000 0.00 0.00 0.00 2.77
3741 9669 2.292292 AGGCGTTTCGTATTGCTTTGTT 59.708 40.909 0.00 0.00 0.00 2.83
3745 9673 3.121496 CGTTTCGTATTGCTTTGTTTGCC 60.121 43.478 0.00 0.00 0.00 4.52
3748 9676 3.413327 TCGTATTGCTTTGTTTGCCCTA 58.587 40.909 0.00 0.00 0.00 3.53
3753 9700 4.414337 TTGCTTTGTTTGCCCTATGTTT 57.586 36.364 0.00 0.00 0.00 2.83
3754 9701 3.988819 TGCTTTGTTTGCCCTATGTTTC 58.011 40.909 0.00 0.00 0.00 2.78
3758 9705 2.577700 TGTTTGCCCTATGTTTCGTGT 58.422 42.857 0.00 0.00 0.00 4.49
3759 9706 2.292016 TGTTTGCCCTATGTTTCGTGTG 59.708 45.455 0.00 0.00 0.00 3.82
3763 9710 1.135689 GCCCTATGTTTCGTGTGCTTG 60.136 52.381 0.00 0.00 0.00 4.01
3766 9713 0.878416 TATGTTTCGTGTGCTTGCCC 59.122 50.000 0.00 0.00 0.00 5.36
3767 9714 2.051345 GTTTCGTGTGCTTGCCCG 60.051 61.111 0.00 0.00 0.00 6.13
3768 9715 3.959975 TTTCGTGTGCTTGCCCGC 61.960 61.111 0.00 0.00 0.00 6.13
3774 9721 2.747460 GTGCTTGCCCGCTCATCA 60.747 61.111 0.00 0.00 0.00 3.07
3777 9724 0.966875 TGCTTGCCCGCTCATCATTT 60.967 50.000 0.00 0.00 0.00 2.32
3778 9725 0.174162 GCTTGCCCGCTCATCATTTT 59.826 50.000 0.00 0.00 0.00 1.82
3782 9729 0.248784 GCCCGCTCATCATTTTCAGC 60.249 55.000 0.00 0.00 0.00 4.26
3786 9733 1.533338 CGCTCATCATTTTCAGCAGGC 60.533 52.381 0.00 0.00 0.00 4.85
3787 9734 1.749634 GCTCATCATTTTCAGCAGGCT 59.250 47.619 0.00 0.00 0.00 4.58
3788 9735 2.479730 GCTCATCATTTTCAGCAGGCTG 60.480 50.000 14.97 14.97 44.86 4.85
3790 9737 2.751259 TCATCATTTTCAGCAGGCTGTC 59.249 45.455 19.75 8.57 43.96 3.51
3792 9739 0.455633 CATTTTCAGCAGGCTGTCGC 60.456 55.000 19.75 1.10 43.96 5.19
3793 9740 0.607489 ATTTTCAGCAGGCTGTCGCT 60.607 50.000 19.75 3.90 43.96 4.93
3795 9742 1.509644 TTTCAGCAGGCTGTCGCTTG 61.510 55.000 19.75 7.45 45.19 4.01
3798 9745 3.730761 GCAGGCTGTCGCTTGGTG 61.731 66.667 17.16 0.00 42.89 4.17
3799 9746 2.031012 CAGGCTGTCGCTTGGTGA 59.969 61.111 6.28 0.00 39.36 4.02
3800 9747 1.376424 CAGGCTGTCGCTTGGTGAT 60.376 57.895 6.28 0.00 39.36 3.06
3801 9748 1.376424 AGGCTGTCGCTTGGTGATG 60.376 57.895 0.00 0.00 36.09 3.07
3803 9750 1.237285 GGCTGTCGCTTGGTGATGTT 61.237 55.000 0.00 0.00 36.09 2.71
3804 9751 1.438651 GCTGTCGCTTGGTGATGTTA 58.561 50.000 0.00 0.00 0.00 2.41
3805 9752 2.009774 GCTGTCGCTTGGTGATGTTAT 58.990 47.619 0.00 0.00 0.00 1.89
3806 9753 2.223112 GCTGTCGCTTGGTGATGTTATG 60.223 50.000 0.00 0.00 0.00 1.90
3807 9754 3.002791 CTGTCGCTTGGTGATGTTATGT 58.997 45.455 0.00 0.00 0.00 2.29
3808 9755 4.180817 CTGTCGCTTGGTGATGTTATGTA 58.819 43.478 0.00 0.00 0.00 2.29
3812 9759 5.459107 GTCGCTTGGTGATGTTATGTAGTAG 59.541 44.000 0.00 0.00 0.00 2.57
3813 9760 4.209288 CGCTTGGTGATGTTATGTAGTAGC 59.791 45.833 0.00 0.00 0.00 3.58
3814 9761 5.116180 GCTTGGTGATGTTATGTAGTAGCA 58.884 41.667 0.00 0.00 0.00 3.49
3816 9763 6.293081 GCTTGGTGATGTTATGTAGTAGCATG 60.293 42.308 0.00 0.00 34.78 4.06
3817 9764 6.233905 TGGTGATGTTATGTAGTAGCATGT 57.766 37.500 0.00 0.00 34.78 3.21
3818 9765 6.649155 TGGTGATGTTATGTAGTAGCATGTT 58.351 36.000 0.00 0.00 34.78 2.71
3819 9766 6.761242 TGGTGATGTTATGTAGTAGCATGTTC 59.239 38.462 0.00 0.00 34.78 3.18
3820 9767 6.202954 GGTGATGTTATGTAGTAGCATGTTCC 59.797 42.308 0.00 0.00 34.78 3.62
3821 9768 6.761242 GTGATGTTATGTAGTAGCATGTTCCA 59.239 38.462 0.00 0.00 34.78 3.53
3822 9769 6.986231 TGATGTTATGTAGTAGCATGTTCCAG 59.014 38.462 0.00 0.00 34.78 3.86
3824 9771 6.573434 TGTTATGTAGTAGCATGTTCCAGAG 58.427 40.000 0.00 0.00 0.00 3.35
3825 9772 4.679373 ATGTAGTAGCATGTTCCAGAGG 57.321 45.455 0.00 0.00 0.00 3.69
3826 9773 3.708451 TGTAGTAGCATGTTCCAGAGGA 58.292 45.455 0.00 0.00 0.00 3.71
3827 9774 4.093743 TGTAGTAGCATGTTCCAGAGGAA 58.906 43.478 0.00 0.00 39.66 3.36
3828 9775 4.716784 TGTAGTAGCATGTTCCAGAGGAAT 59.283 41.667 1.30 0.00 44.04 3.01
3829 9776 4.148128 AGTAGCATGTTCCAGAGGAATG 57.852 45.455 1.30 0.00 44.04 2.67
3830 9777 3.776969 AGTAGCATGTTCCAGAGGAATGA 59.223 43.478 1.30 0.00 44.04 2.57
3831 9778 3.726557 AGCATGTTCCAGAGGAATGAA 57.273 42.857 1.30 0.00 44.04 2.57
3832 9779 4.246712 AGCATGTTCCAGAGGAATGAAT 57.753 40.909 1.30 0.00 44.04 2.57
3833 9780 3.952323 AGCATGTTCCAGAGGAATGAATG 59.048 43.478 1.30 7.88 44.04 2.67
3834 9781 3.067742 GCATGTTCCAGAGGAATGAATGG 59.932 47.826 1.30 0.00 44.04 3.16
3835 9782 4.275810 CATGTTCCAGAGGAATGAATGGT 58.724 43.478 1.30 0.00 44.04 3.55
3836 9783 3.689347 TGTTCCAGAGGAATGAATGGTG 58.311 45.455 1.30 0.00 44.04 4.17
3837 9784 3.074390 TGTTCCAGAGGAATGAATGGTGT 59.926 43.478 1.30 0.00 44.04 4.16
3838 9785 3.354948 TCCAGAGGAATGAATGGTGTG 57.645 47.619 0.00 0.00 34.32 3.82
3839 9786 2.644299 TCCAGAGGAATGAATGGTGTGT 59.356 45.455 0.00 0.00 34.32 3.72
3840 9787 2.751259 CCAGAGGAATGAATGGTGTGTG 59.249 50.000 0.00 0.00 0.00 3.82
3841 9788 3.559811 CCAGAGGAATGAATGGTGTGTGA 60.560 47.826 0.00 0.00 0.00 3.58
3842 9789 4.267536 CAGAGGAATGAATGGTGTGTGAT 58.732 43.478 0.00 0.00 0.00 3.06
3843 9790 5.430886 CAGAGGAATGAATGGTGTGTGATA 58.569 41.667 0.00 0.00 0.00 2.15
3844 9791 5.295292 CAGAGGAATGAATGGTGTGTGATAC 59.705 44.000 0.00 0.00 0.00 2.24
3847 9794 4.943705 GGAATGAATGGTGTGTGATACTGT 59.056 41.667 0.00 0.00 0.00 3.55
3865 9812 0.888285 GTCAGGCTCAGCAGCTGTTT 60.888 55.000 22.10 0.77 46.03 2.83
3873 9820 3.059051 GCTCAGCAGCTGTTTATATGCTC 60.059 47.826 22.10 0.00 45.57 4.26
3874 9821 4.124970 CTCAGCAGCTGTTTATATGCTCA 58.875 43.478 22.10 0.00 45.57 4.26
3875 9822 3.873361 TCAGCAGCTGTTTATATGCTCAC 59.127 43.478 22.10 0.00 45.57 3.51
3877 9824 4.025061 CAGCAGCTGTTTATATGCTCACTC 60.025 45.833 16.64 0.00 45.57 3.51
3880 9827 5.121811 CAGCTGTTTATATGCTCACTCCTT 58.878 41.667 5.25 0.00 34.51 3.36
3884 9831 6.676456 GCTGTTTATATGCTCACTCCTTTGTG 60.676 42.308 0.00 0.00 39.15 3.33
3885 9832 6.237901 TGTTTATATGCTCACTCCTTTGTGT 58.762 36.000 0.00 0.00 38.90 3.72
3886 9833 6.371548 TGTTTATATGCTCACTCCTTTGTGTC 59.628 38.462 0.00 0.00 38.90 3.67
3887 9834 4.833478 ATATGCTCACTCCTTTGTGTCT 57.167 40.909 0.00 0.00 38.90 3.41
3888 9835 5.939764 ATATGCTCACTCCTTTGTGTCTA 57.060 39.130 0.00 0.00 38.90 2.59
3896 9845 7.928706 GCTCACTCCTTTGTGTCTATGTATAAT 59.071 37.037 0.00 0.00 38.90 1.28
3897 9846 9.469807 CTCACTCCTTTGTGTCTATGTATAATC 57.530 37.037 0.00 0.00 38.90 1.75
3899 9848 9.469807 CACTCCTTTGTGTCTATGTATAATCTC 57.530 37.037 0.00 0.00 33.61 2.75
3902 9851 8.144478 TCCTTTGTGTCTATGTATAATCTCTGC 58.856 37.037 0.00 0.00 0.00 4.26
3906 9855 7.436933 TGTGTCTATGTATAATCTCTGCCTTG 58.563 38.462 0.00 0.00 0.00 3.61
3911 9860 3.384789 TGTATAATCTCTGCCTTGCTCGT 59.615 43.478 0.00 0.00 0.00 4.18
3912 9861 2.299993 TAATCTCTGCCTTGCTCGTG 57.700 50.000 0.00 0.00 0.00 4.35
3914 9863 0.108424 ATCTCTGCCTTGCTCGTGAC 60.108 55.000 0.00 0.00 0.00 3.67
3915 9864 1.005748 CTCTGCCTTGCTCGTGACA 60.006 57.895 0.00 0.00 0.00 3.58
3916 9865 1.287730 CTCTGCCTTGCTCGTGACAC 61.288 60.000 0.00 0.00 0.00 3.67
3920 9869 1.594293 CCTTGCTCGTGACACGGTT 60.594 57.895 26.55 0.00 42.81 4.44
3925 9874 1.269883 TGCTCGTGACACGGTTATGTT 60.270 47.619 26.55 0.00 42.81 2.71
3926 9875 1.796459 GCTCGTGACACGGTTATGTTT 59.204 47.619 26.55 0.00 42.81 2.83
3928 9877 2.406130 TCGTGACACGGTTATGTTTCC 58.594 47.619 26.55 0.00 42.81 3.13
3929 9878 2.136728 CGTGACACGGTTATGTTTCCA 58.863 47.619 20.26 0.00 38.08 3.53
3930 9879 2.544686 CGTGACACGGTTATGTTTCCAA 59.455 45.455 20.26 0.00 38.08 3.53
3931 9880 3.187637 CGTGACACGGTTATGTTTCCAAT 59.812 43.478 20.26 0.00 38.08 3.16
3932 9881 4.319911 CGTGACACGGTTATGTTTCCAATT 60.320 41.667 20.26 0.00 38.08 2.32
3933 9882 5.525199 GTGACACGGTTATGTTTCCAATTT 58.475 37.500 0.00 0.00 31.24 1.82
3936 9885 5.216648 ACACGGTTATGTTTCCAATTTTCG 58.783 37.500 0.00 0.00 0.00 3.46
3938 9887 3.299542 CGGTTATGTTTCCAATTTTCGCG 59.700 43.478 0.00 0.00 0.00 5.87
3939 9888 4.477780 GGTTATGTTTCCAATTTTCGCGA 58.522 39.130 3.71 3.71 0.00 5.87
3940 9889 4.918583 GGTTATGTTTCCAATTTTCGCGAA 59.081 37.500 19.38 19.38 0.00 4.70
3941 9890 5.575218 GGTTATGTTTCCAATTTTCGCGAAT 59.425 36.000 24.05 5.62 0.00 3.34
3942 9891 6.090223 GGTTATGTTTCCAATTTTCGCGAATT 59.910 34.615 24.05 12.37 0.00 2.17
3943 9892 7.359681 GGTTATGTTTCCAATTTTCGCGAATTT 60.360 33.333 24.05 16.29 0.00 1.82
3944 9893 5.568747 TGTTTCCAATTTTCGCGAATTTC 57.431 34.783 24.05 7.83 0.00 2.17
3945 9894 5.285651 TGTTTCCAATTTTCGCGAATTTCT 58.714 33.333 24.05 4.88 0.00 2.52
3946 9895 6.439599 TGTTTCCAATTTTCGCGAATTTCTA 58.560 32.000 24.05 3.86 0.00 2.10
3947 9896 6.361214 TGTTTCCAATTTTCGCGAATTTCTAC 59.639 34.615 24.05 13.21 0.00 2.59
3948 9897 4.643953 TCCAATTTTCGCGAATTTCTACG 58.356 39.130 24.05 7.39 0.00 3.51
3949 9898 3.783943 CCAATTTTCGCGAATTTCTACGG 59.216 43.478 24.05 12.76 0.00 4.02
3950 9899 3.668596 ATTTTCGCGAATTTCTACGGG 57.331 42.857 24.05 0.00 42.22 5.28
3951 9900 1.361793 TTTCGCGAATTTCTACGGGG 58.638 50.000 24.05 0.00 41.44 5.73
3952 9901 0.460635 TTCGCGAATTTCTACGGGGG 60.461 55.000 19.38 0.00 41.44 5.40
3953 9902 2.531376 CGCGAATTTCTACGGGGGC 61.531 63.158 0.00 0.00 38.44 5.80
3954 9903 2.531376 GCGAATTTCTACGGGGGCG 61.531 63.158 0.00 0.00 0.00 6.13
3955 9904 1.153509 CGAATTTCTACGGGGGCGT 60.154 57.895 0.00 0.00 0.00 5.68
3956 9905 1.149964 CGAATTTCTACGGGGGCGTC 61.150 60.000 0.00 0.00 0.00 5.19
3957 9906 0.812811 GAATTTCTACGGGGGCGTCC 60.813 60.000 0.00 0.00 0.00 4.79
3970 9919 4.891727 CGTCCCGGCGGATCCTTG 62.892 72.222 30.79 9.73 41.40 3.61
3974 9923 4.609018 CCGGCGGATCCTTGCGAT 62.609 66.667 24.41 0.00 39.29 4.58
3975 9924 3.038417 CGGCGGATCCTTGCGATC 61.038 66.667 10.75 0.00 45.91 3.69
3976 9925 2.423446 GGCGGATCCTTGCGATCT 59.577 61.111 10.75 0.00 45.90 2.75
3977 9926 1.666234 GGCGGATCCTTGCGATCTC 60.666 63.158 10.75 0.00 45.90 2.75
3978 9927 1.666234 GCGGATCCTTGCGATCTCC 60.666 63.158 10.75 0.00 45.90 3.71
3979 9928 1.372251 CGGATCCTTGCGATCTCCG 60.372 63.158 10.75 3.29 45.90 4.63
3994 9943 1.439679 CTCCGGCTGTTTGGAGTAAC 58.560 55.000 0.00 0.00 45.48 2.50
3996 9945 1.349688 TCCGGCTGTTTGGAGTAACAT 59.650 47.619 0.00 0.00 37.39 2.71
3997 9946 2.159382 CCGGCTGTTTGGAGTAACATT 58.841 47.619 0.00 0.00 37.39 2.71
4000 9949 3.004315 CGGCTGTTTGGAGTAACATTTGT 59.996 43.478 0.00 0.00 37.39 2.83
4001 9950 4.546570 GGCTGTTTGGAGTAACATTTGTC 58.453 43.478 0.00 0.00 37.39 3.18
4002 9951 4.278419 GGCTGTTTGGAGTAACATTTGTCT 59.722 41.667 0.00 0.00 37.39 3.41
4003 9952 5.215160 GCTGTTTGGAGTAACATTTGTCTG 58.785 41.667 0.00 0.00 37.39 3.51
4004 9953 5.008613 GCTGTTTGGAGTAACATTTGTCTGA 59.991 40.000 0.00 0.00 37.39 3.27
4005 9954 6.459573 GCTGTTTGGAGTAACATTTGTCTGAA 60.460 38.462 0.00 0.00 37.39 3.02
4008 9957 6.861065 TTGGAGTAACATTTGTCTGAACTC 57.139 37.500 0.00 0.00 34.68 3.01
4009 9958 6.174720 TGGAGTAACATTTGTCTGAACTCT 57.825 37.500 0.00 0.00 35.23 3.24
4010 9959 5.991606 TGGAGTAACATTTGTCTGAACTCTG 59.008 40.000 0.00 0.00 35.23 3.35
4012 9961 6.174720 AGTAACATTTGTCTGAACTCTGGA 57.825 37.500 0.00 0.00 0.00 3.86
4013 9962 6.226787 AGTAACATTTGTCTGAACTCTGGAG 58.773 40.000 0.00 0.00 0.00 3.86
4014 9963 4.696479 ACATTTGTCTGAACTCTGGAGT 57.304 40.909 0.00 0.00 44.94 3.85
4015 9964 5.808366 ACATTTGTCTGAACTCTGGAGTA 57.192 39.130 3.54 0.00 41.58 2.59
4016 9965 6.174720 ACATTTGTCTGAACTCTGGAGTAA 57.825 37.500 3.54 0.00 41.58 2.24
4017 9966 5.992217 ACATTTGTCTGAACTCTGGAGTAAC 59.008 40.000 3.54 2.98 41.58 2.50
4018 9967 5.607939 TTTGTCTGAACTCTGGAGTAACA 57.392 39.130 3.54 6.94 41.58 2.41
4019 9968 5.808366 TTGTCTGAACTCTGGAGTAACAT 57.192 39.130 3.54 0.00 41.58 2.71
4020 9969 5.808366 TGTCTGAACTCTGGAGTAACATT 57.192 39.130 3.54 0.00 41.58 2.71
4021 9970 6.174720 TGTCTGAACTCTGGAGTAACATTT 57.825 37.500 3.54 0.00 41.58 2.32
4022 9971 5.991606 TGTCTGAACTCTGGAGTAACATTTG 59.008 40.000 3.54 0.00 41.58 2.32
4024 9973 6.146347 GTCTGAACTCTGGAGTAACATTTGTC 59.854 42.308 3.54 0.00 41.58 3.18
4025 9974 6.042093 TCTGAACTCTGGAGTAACATTTGTCT 59.958 38.462 3.54 0.00 41.58 3.41
4026 9975 5.991606 TGAACTCTGGAGTAACATTTGTCTG 59.008 40.000 3.54 0.00 41.58 3.51
4028 9977 6.174720 ACTCTGGAGTAACATTTGTCTGAA 57.825 37.500 0.95 0.00 40.43 3.02
4029 9978 5.992217 ACTCTGGAGTAACATTTGTCTGAAC 59.008 40.000 0.95 0.00 40.43 3.18
4031 9980 6.223852 TCTGGAGTAACATTTGTCTGAACTC 58.776 40.000 0.00 0.00 34.68 3.01
4032 9981 6.042093 TCTGGAGTAACATTTGTCTGAACTCT 59.958 38.462 0.00 0.00 35.23 3.24
4034 9983 5.409826 GGAGTAACATTTGTCTGAACTCTGG 59.590 44.000 0.00 0.00 35.23 3.86
4037 10047 7.506114 AGTAACATTTGTCTGAACTCTGGTTA 58.494 34.615 0.00 0.00 35.58 2.85
4040 10050 6.299141 ACATTTGTCTGAACTCTGGTTATGT 58.701 36.000 0.00 0.00 35.58 2.29
4043 10053 4.631131 TGTCTGAACTCTGGTTATGTGTG 58.369 43.478 0.00 0.00 35.58 3.82
4047 10058 6.145696 GTCTGAACTCTGGTTATGTGTGTTAC 59.854 42.308 0.00 0.00 35.58 2.50
4066 10077 5.186021 TGTTACACACACCACCTTTTTCATT 59.814 36.000 0.00 0.00 0.00 2.57
4083 10099 3.395639 TCATTACGGTCAACTCAACACC 58.604 45.455 0.00 0.00 0.00 4.16
4119 10135 3.937062 GGCTTTCGGCGCCGTATG 61.937 66.667 44.16 35.85 42.94 2.39
4120 10136 2.888534 GCTTTCGGCGCCGTATGA 60.889 61.111 44.16 26.14 40.74 2.15
4121 10137 2.457778 GCTTTCGGCGCCGTATGAA 61.458 57.895 44.16 30.19 40.74 2.57
4122 10138 1.636340 CTTTCGGCGCCGTATGAAG 59.364 57.895 44.16 34.32 40.74 3.02
4123 10139 0.804544 CTTTCGGCGCCGTATGAAGA 60.805 55.000 44.16 24.13 40.74 2.87
4124 10140 0.390078 TTTCGGCGCCGTATGAAGAA 60.390 50.000 44.16 28.33 40.74 2.52
4125 10141 0.390078 TTCGGCGCCGTATGAAGAAA 60.390 50.000 44.16 27.58 40.74 2.52
4126 10142 0.390078 TCGGCGCCGTATGAAGAAAA 60.390 50.000 44.16 21.74 40.74 2.29
4127 10143 0.655733 CGGCGCCGTATGAAGAAAAT 59.344 50.000 39.71 0.00 34.35 1.82
4128 10144 1.862201 CGGCGCCGTATGAAGAAAATA 59.138 47.619 39.71 0.00 34.35 1.40
4129 10145 2.478894 CGGCGCCGTATGAAGAAAATAT 59.521 45.455 39.71 0.00 34.35 1.28
4130 10146 3.664276 CGGCGCCGTATGAAGAAAATATG 60.664 47.826 39.71 6.11 34.35 1.78
4131 10147 3.250040 GGCGCCGTATGAAGAAAATATGT 59.750 43.478 12.58 0.00 0.00 2.29
4132 10148 4.261031 GGCGCCGTATGAAGAAAATATGTT 60.261 41.667 12.58 0.00 0.00 2.71
4133 10149 5.270853 GCGCCGTATGAAGAAAATATGTTT 58.729 37.500 0.00 0.00 0.00 2.83
4134 10150 5.171337 GCGCCGTATGAAGAAAATATGTTTG 59.829 40.000 0.00 0.00 0.00 2.93
4135 10151 5.171337 CGCCGTATGAAGAAAATATGTTTGC 59.829 40.000 0.00 0.00 0.00 3.68
4136 10152 6.265577 GCCGTATGAAGAAAATATGTTTGCT 58.734 36.000 0.00 0.00 34.53 3.91
4137 10153 6.414987 GCCGTATGAAGAAAATATGTTTGCTC 59.585 38.462 0.00 0.00 31.73 4.26
4138 10154 7.471721 CCGTATGAAGAAAATATGTTTGCTCA 58.528 34.615 0.00 0.00 31.73 4.26
4139 10155 8.131100 CCGTATGAAGAAAATATGTTTGCTCAT 58.869 33.333 0.00 4.95 31.73 2.90
4140 10156 9.162793 CGTATGAAGAAAATATGTTTGCTCATC 57.837 33.333 9.54 1.27 31.73 2.92
4143 10159 7.765307 TGAAGAAAATATGTTTGCTCATCTCC 58.235 34.615 0.00 0.00 31.73 3.71
4144 10160 7.394077 TGAAGAAAATATGTTTGCTCATCTCCA 59.606 33.333 0.00 0.00 31.73 3.86
4145 10161 7.707624 AGAAAATATGTTTGCTCATCTCCAA 57.292 32.000 0.00 0.00 25.81 3.53
4146 10162 8.125978 AGAAAATATGTTTGCTCATCTCCAAA 57.874 30.769 0.00 0.00 25.81 3.28
4147 10163 8.587608 AGAAAATATGTTTGCTCATCTCCAAAA 58.412 29.630 0.00 0.00 33.25 2.44
4148 10164 9.206870 GAAAATATGTTTGCTCATCTCCAAAAA 57.793 29.630 0.00 0.00 33.25 1.94
4149 10165 8.538409 AAATATGTTTGCTCATCTCCAAAAAC 57.462 30.769 0.00 0.00 33.25 2.43
4150 10166 4.998671 TGTTTGCTCATCTCCAAAAACA 57.001 36.364 0.00 0.00 35.72 2.83
4151 10167 4.935702 TGTTTGCTCATCTCCAAAAACAG 58.064 39.130 0.00 0.00 33.80 3.16
4152 10168 4.644234 TGTTTGCTCATCTCCAAAAACAGA 59.356 37.500 0.00 0.00 33.80 3.41
4153 10169 5.302568 TGTTTGCTCATCTCCAAAAACAGAT 59.697 36.000 0.00 0.00 33.80 2.90
4154 10170 6.183360 TGTTTGCTCATCTCCAAAAACAGATT 60.183 34.615 0.00 0.00 33.80 2.40
4155 10171 5.381174 TGCTCATCTCCAAAAACAGATTG 57.619 39.130 0.00 0.00 0.00 2.67
4156 10172 4.171754 GCTCATCTCCAAAAACAGATTGC 58.828 43.478 0.00 0.00 0.00 3.56
4157 10173 4.082354 GCTCATCTCCAAAAACAGATTGCT 60.082 41.667 0.00 0.00 0.00 3.91
4158 10174 5.124457 GCTCATCTCCAAAAACAGATTGCTA 59.876 40.000 0.00 0.00 0.00 3.49
4159 10175 6.500684 TCATCTCCAAAAACAGATTGCTAC 57.499 37.500 0.00 0.00 0.00 3.58
4160 10176 5.415701 TCATCTCCAAAAACAGATTGCTACC 59.584 40.000 0.00 0.00 0.00 3.18
4161 10177 4.985538 TCTCCAAAAACAGATTGCTACCT 58.014 39.130 0.00 0.00 0.00 3.08
4162 10178 6.121776 TCTCCAAAAACAGATTGCTACCTA 57.878 37.500 0.00 0.00 0.00 3.08
4163 10179 5.938125 TCTCCAAAAACAGATTGCTACCTAC 59.062 40.000 0.00 0.00 0.00 3.18
4164 10180 5.626142 TCCAAAAACAGATTGCTACCTACA 58.374 37.500 0.00 0.00 0.00 2.74
4165 10181 6.245408 TCCAAAAACAGATTGCTACCTACAT 58.755 36.000 0.00 0.00 0.00 2.29
4166 10182 6.150976 TCCAAAAACAGATTGCTACCTACATG 59.849 38.462 0.00 0.00 0.00 3.21
4167 10183 6.071952 CCAAAAACAGATTGCTACCTACATGT 60.072 38.462 2.69 2.69 0.00 3.21
4168 10184 7.120579 CCAAAAACAGATTGCTACCTACATGTA 59.879 37.037 5.25 5.25 0.00 2.29
4169 10185 8.511321 CAAAAACAGATTGCTACCTACATGTAA 58.489 33.333 7.06 0.00 0.00 2.41
4203 10243 4.829064 TTTGCTGGTGTAGAAATGTGTC 57.171 40.909 0.00 0.00 0.00 3.67
4214 10262 7.148623 GGTGTAGAAATGTGTCTGTAAGTAAGC 60.149 40.741 0.00 0.00 33.76 3.09
4219 10267 3.334691 TGTGTCTGTAAGTAAGCCATGC 58.665 45.455 0.00 0.00 33.76 4.06
4237 10285 3.706802 TGCTCTCTTCTAGAAGCGATG 57.293 47.619 25.04 18.10 38.28 3.84
4238 10286 3.020274 TGCTCTCTTCTAGAAGCGATGT 58.980 45.455 25.04 0.00 38.28 3.06
4239 10287 3.181492 TGCTCTCTTCTAGAAGCGATGTG 60.181 47.826 25.04 14.64 38.28 3.21
4252 10300 1.802880 GCGATGTGGTGGTAGTAGCAG 60.803 57.143 1.37 0.00 0.00 4.24
4279 10365 1.107538 ATGCTGATGTGGATGCTGGC 61.108 55.000 0.00 0.00 0.00 4.85
4353 10442 2.546373 CCAGCATGTGTCTTTTGGTTGG 60.546 50.000 0.00 0.00 0.00 3.77
4390 10479 4.363999 CTGTGGTTGCAATTTAAAACGGA 58.636 39.130 0.59 0.00 0.00 4.69
4400 10489 5.181433 GCAATTTAAAACGGAGTCCTCTCTT 59.819 40.000 7.77 0.00 45.00 2.85
4466 10555 5.218139 GCTGTTTTCAATCTCACTTTCTGG 58.782 41.667 0.00 0.00 0.00 3.86
4506 10595 5.448904 GCTGCTTTCAATTTCTTTTTGGCAA 60.449 36.000 0.00 0.00 0.00 4.52
4544 10633 4.013728 TCCTAGTTATGCCGCACAATTTT 58.986 39.130 0.00 0.00 0.00 1.82
4606 10695 2.364323 TAACACCAACCCCCTCCCCT 62.364 60.000 0.00 0.00 0.00 4.79
4607 10696 2.126372 CACCAACCCCCTCCCCTA 59.874 66.667 0.00 0.00 0.00 3.53
4608 10697 2.126603 ACCAACCCCCTCCCCTAC 59.873 66.667 0.00 0.00 0.00 3.18
4609 10698 2.459710 CCAACCCCCTCCCCTACT 59.540 66.667 0.00 0.00 0.00 2.57
4610 10699 1.164288 ACCAACCCCCTCCCCTACTA 61.164 60.000 0.00 0.00 0.00 1.82
4660 10751 5.067153 TGCGTAATCTTTTCATACAATGGGG 59.933 40.000 0.00 0.00 0.00 4.96
4675 10766 4.144297 CAATGGGGGTATGTCAATGTAGG 58.856 47.826 0.00 0.00 0.00 3.18
4677 10768 2.775384 TGGGGGTATGTCAATGTAGGAC 59.225 50.000 0.00 0.00 35.83 3.85
4678 10769 3.046374 GGGGGTATGTCAATGTAGGACT 58.954 50.000 0.00 0.00 36.26 3.85
4679 10770 3.071167 GGGGGTATGTCAATGTAGGACTC 59.929 52.174 0.00 0.00 36.26 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 34 7.951591 TGACAAATGATCTATCCGACTATCAA 58.048 34.615 0.00 0.00 32.47 2.57
176 178 8.598924 CGGCAAATAGATGACATGAGTATTATC 58.401 37.037 0.00 0.00 0.00 1.75
202 204 5.161358 GGTTGAACATTAGGCTACTTTTGC 58.839 41.667 0.00 0.00 0.00 3.68
212 214 5.863965 ACATTTTTGGGGTTGAACATTAGG 58.136 37.500 0.00 0.00 0.00 2.69
243 245 6.309980 CGCATTTGTTTGCCTTTGTTATCATA 59.690 34.615 0.00 0.00 39.52 2.15
261 264 7.216693 GGCAAACAATATTCAATTTCGCATTTG 59.783 33.333 0.00 0.00 0.00 2.32
272 275 7.387397 GGTGAAGAAATGGCAAACAATATTCAA 59.613 33.333 0.00 0.00 34.30 2.69
356 379 7.539712 TTAGAGTGCAATAGTATCAGCAAAC 57.460 36.000 10.71 8.52 38.91 2.93
426 561 0.530431 GTGCTTGGTGCCCAAAACTG 60.530 55.000 7.87 0.00 43.44 3.16
427 562 1.822615 GTGCTTGGTGCCCAAAACT 59.177 52.632 7.87 0.00 43.44 2.66
435 570 3.562567 TTTATAAACCGTGCTTGGTGC 57.437 42.857 1.02 0.00 42.89 5.01
660 5071 6.813152 CAGGCCTAAATGTTTTCCATAAAGTG 59.187 38.462 3.98 0.00 31.97 3.16
669 5080 2.488153 ACGAGCAGGCCTAAATGTTTTC 59.512 45.455 3.98 0.00 0.00 2.29
743 6130 9.875691 GGCCTTTTCTGATTAGTTATGAATTTT 57.124 29.630 0.00 0.00 0.00 1.82
744 6131 8.190784 CGGCCTTTTCTGATTAGTTATGAATTT 58.809 33.333 0.00 0.00 0.00 1.82
745 6132 7.556275 TCGGCCTTTTCTGATTAGTTATGAATT 59.444 33.333 0.00 0.00 0.00 2.17
746 6133 7.054124 TCGGCCTTTTCTGATTAGTTATGAAT 58.946 34.615 0.00 0.00 0.00 2.57
747 6134 6.411376 TCGGCCTTTTCTGATTAGTTATGAA 58.589 36.000 0.00 0.00 0.00 2.57
748 6135 5.984725 TCGGCCTTTTCTGATTAGTTATGA 58.015 37.500 0.00 0.00 0.00 2.15
749 6136 6.538742 TCTTCGGCCTTTTCTGATTAGTTATG 59.461 38.462 0.00 0.00 0.00 1.90
750 6137 6.539103 GTCTTCGGCCTTTTCTGATTAGTTAT 59.461 38.462 0.00 0.00 0.00 1.89
751 6138 5.873164 GTCTTCGGCCTTTTCTGATTAGTTA 59.127 40.000 0.00 0.00 0.00 2.24
752 6139 4.695928 GTCTTCGGCCTTTTCTGATTAGTT 59.304 41.667 0.00 0.00 0.00 2.24
753 6140 4.254492 GTCTTCGGCCTTTTCTGATTAGT 58.746 43.478 0.00 0.00 0.00 2.24
754 6141 3.623510 GGTCTTCGGCCTTTTCTGATTAG 59.376 47.826 0.00 0.00 0.00 1.73
755 6142 3.263425 AGGTCTTCGGCCTTTTCTGATTA 59.737 43.478 0.00 0.00 31.04 1.75
756 6143 2.040412 AGGTCTTCGGCCTTTTCTGATT 59.960 45.455 0.00 0.00 31.04 2.57
757 6144 1.630878 AGGTCTTCGGCCTTTTCTGAT 59.369 47.619 0.00 0.00 31.04 2.90
758 6145 1.056660 AGGTCTTCGGCCTTTTCTGA 58.943 50.000 0.00 0.00 31.04 3.27
759 6146 1.897560 AAGGTCTTCGGCCTTTTCTG 58.102 50.000 0.00 0.00 43.24 3.02
792 6179 2.360475 GGCTGAGCAGGGGTTCAC 60.360 66.667 6.82 0.00 30.57 3.18
794 6181 4.785453 CGGGCTGAGCAGGGGTTC 62.785 72.222 6.82 0.00 0.00 3.62
916 6330 2.283529 GGGGTGAGTTGAGGCTCGA 61.284 63.158 10.42 4.91 38.28 4.04
934 6348 2.196925 CGACCGGATCTGGGAGAGG 61.197 68.421 24.68 5.02 0.00 3.69
969 6410 4.753662 CGTCGAGGAGGGGGTGGA 62.754 72.222 0.00 0.00 0.00 4.02
1097 6549 2.282958 TGACGCGGAGGAGGAGTT 60.283 61.111 12.47 0.00 0.00 3.01
1331 6840 0.167908 ACAAACACGCACACACACAG 59.832 50.000 0.00 0.00 0.00 3.66
1339 6879 1.273688 GAACCCAAACAAACACGCAC 58.726 50.000 0.00 0.00 0.00 5.34
1340 6880 0.888619 TGAACCCAAACAAACACGCA 59.111 45.000 0.00 0.00 0.00 5.24
1341 6881 1.555477 CTGAACCCAAACAAACACGC 58.445 50.000 0.00 0.00 0.00 5.34
1342 6882 1.474879 ACCTGAACCCAAACAAACACG 59.525 47.619 0.00 0.00 0.00 4.49
1431 6972 4.980805 TGGTCACCTCGCGTTGCC 62.981 66.667 5.77 8.48 0.00 4.52
1478 7019 3.118592 ACAGAGGGAGCGAAAAATCCTAG 60.119 47.826 0.00 0.00 35.80 3.02
1489 7031 0.895530 TCTTTACCACAGAGGGAGCG 59.104 55.000 0.00 0.00 43.89 5.03
1504 7046 5.180117 CACAAATCGATCACCAACTCTCTTT 59.820 40.000 0.00 0.00 0.00 2.52
1727 7339 2.009774 CCCTCAAATACAGAAGCACCG 58.990 52.381 0.00 0.00 0.00 4.94
1728 7340 2.369394 CCCCTCAAATACAGAAGCACC 58.631 52.381 0.00 0.00 0.00 5.01
1760 7376 8.093307 TCCATTAATTGTGCTGAATAAAAAGCA 58.907 29.630 0.00 0.00 46.84 3.91
1805 7425 0.328258 TCTGGAAAGCCTACCCAAGC 59.672 55.000 0.00 0.00 34.31 4.01
1851 7474 4.600012 AAAGCGCACATACTGACATTAC 57.400 40.909 11.47 0.00 0.00 1.89
1853 7476 4.253685 AGTAAAGCGCACATACTGACATT 58.746 39.130 11.47 0.00 0.00 2.71
1884 7516 2.755836 TTCTTTCACTCGCAACTTGC 57.244 45.000 3.44 3.44 40.69 4.01
2017 7661 9.849166 TTACCACACTTTAAAACTTGAAAGAAG 57.151 29.630 6.33 2.07 36.39 2.85
2022 7707 8.294954 TCCATTACCACACTTTAAAACTTGAA 57.705 30.769 0.00 0.00 0.00 2.69
2023 7708 7.883391 TCCATTACCACACTTTAAAACTTGA 57.117 32.000 0.00 0.00 0.00 3.02
2024 7709 8.576442 AGATCCATTACCACACTTTAAAACTTG 58.424 33.333 0.00 0.00 0.00 3.16
2026 7711 7.724061 ACAGATCCATTACCACACTTTAAAACT 59.276 33.333 0.00 0.00 0.00 2.66
2032 7717 7.175104 ACATAACAGATCCATTACCACACTTT 58.825 34.615 0.00 0.00 0.00 2.66
2165 7858 3.517500 GGACCTCATTTCTCCTGACTTCT 59.482 47.826 0.00 0.00 0.00 2.85
2183 7876 4.657436 ACATCTTATTCGTCTGAGGACC 57.343 45.455 0.00 0.00 39.15 4.46
2236 7932 6.846988 TGCCATCCCAATAATACATTCTACA 58.153 36.000 0.00 0.00 0.00 2.74
2283 8001 4.473477 AGTCAAGTACCTAGGAACATGC 57.527 45.455 17.98 0.00 0.00 4.06
2284 8002 6.777213 ACTAGTCAAGTACCTAGGAACATG 57.223 41.667 17.98 9.26 36.36 3.21
2287 8005 5.713861 TCCAACTAGTCAAGTACCTAGGAAC 59.286 44.000 17.98 3.63 37.50 3.62
2293 8011 8.611051 ATCTAAATCCAACTAGTCAAGTACCT 57.389 34.615 0.00 0.00 37.50 3.08
2362 8080 4.899457 TGACCCGGTGAATACTGAGATATT 59.101 41.667 0.00 0.00 35.05 1.28
2363 8081 4.480115 TGACCCGGTGAATACTGAGATAT 58.520 43.478 0.00 0.00 35.05 1.63
2444 8162 6.594937 ACAGCACAAAACAAAATGAAGAATGT 59.405 30.769 0.00 0.00 0.00 2.71
2457 8194 8.409371 TGATTATCAGTTTTACAGCACAAAACA 58.591 29.630 17.41 4.26 44.58 2.83
2657 8542 5.036117 TGCCTGTAGGATCTGATAAAACC 57.964 43.478 1.17 0.00 37.39 3.27
2684 8569 8.379902 CCAAACACAAAAACTTGACATAAGAAC 58.620 33.333 0.00 0.00 0.00 3.01
2824 8727 1.522668 TGGAATGTTCTGCCAAGTCG 58.477 50.000 0.00 0.00 0.00 4.18
2835 8738 6.774656 AGAAAGACACAGAATCTTGGAATGTT 59.225 34.615 0.00 0.00 36.52 2.71
2938 8849 6.535963 TGTTCTAGGCTTTTAGGTAGGTAC 57.464 41.667 0.00 0.00 0.00 3.34
2942 8853 8.880750 GTTGTATTGTTCTAGGCTTTTAGGTAG 58.119 37.037 0.00 0.00 0.00 3.18
2970 8885 5.646360 TCGTCTTTTTCTTGGAAAACAGTCT 59.354 36.000 5.14 0.00 0.00 3.24
3054 8969 1.734465 GATATGAGTAGCGGGCATTGC 59.266 52.381 0.00 0.00 0.00 3.56
3180 9096 8.934023 TCTGTTCTTACTAAATGTCCCAATTT 57.066 30.769 0.00 0.00 34.24 1.82
3342 9265 1.394917 CTGCACTAACGTGAATGAGGC 59.605 52.381 0.00 0.00 43.97 4.70
3346 9269 2.668457 GTCTCCTGCACTAACGTGAATG 59.332 50.000 0.00 0.00 43.97 2.67
3347 9270 2.299013 TGTCTCCTGCACTAACGTGAAT 59.701 45.455 0.00 0.00 43.97 2.57
3348 9271 1.684450 TGTCTCCTGCACTAACGTGAA 59.316 47.619 0.00 0.00 43.97 3.18
3350 9273 2.370281 ATGTCTCCTGCACTAACGTG 57.630 50.000 0.00 0.00 44.07 4.49
3352 9275 5.352284 AGATTTATGTCTCCTGCACTAACG 58.648 41.667 0.00 0.00 0.00 3.18
3353 9276 7.617041 AAAGATTTATGTCTCCTGCACTAAC 57.383 36.000 0.00 0.00 0.00 2.34
3354 9277 7.987458 CCTAAAGATTTATGTCTCCTGCACTAA 59.013 37.037 0.00 0.00 0.00 2.24
3356 9279 6.156949 TCCTAAAGATTTATGTCTCCTGCACT 59.843 38.462 0.00 0.00 0.00 4.40
3357 9280 6.349300 TCCTAAAGATTTATGTCTCCTGCAC 58.651 40.000 0.00 0.00 0.00 4.57
3358 9281 6.156949 ACTCCTAAAGATTTATGTCTCCTGCA 59.843 38.462 0.00 0.00 0.00 4.41
3359 9282 6.587273 ACTCCTAAAGATTTATGTCTCCTGC 58.413 40.000 0.00 0.00 0.00 4.85
3360 9283 9.103861 GAAACTCCTAAAGATTTATGTCTCCTG 57.896 37.037 0.00 0.00 0.00 3.86
3361 9284 8.268605 GGAAACTCCTAAAGATTTATGTCTCCT 58.731 37.037 0.00 0.00 32.53 3.69
3362 9285 8.047310 TGGAAACTCCTAAAGATTTATGTCTCC 58.953 37.037 0.00 0.00 37.46 3.71
3363 9286 9.449719 TTGGAAACTCCTAAAGATTTATGTCTC 57.550 33.333 0.00 0.00 37.46 3.36
3366 9289 7.881232 TCGTTGGAAACTCCTAAAGATTTATGT 59.119 33.333 0.00 0.00 46.99 2.29
3370 9293 7.576861 TTTCGTTGGAAACTCCTAAAGATTT 57.423 32.000 0.00 0.00 46.99 2.17
3428 9354 6.383415 TCACAAGGCATTTTATTAACGGAAC 58.617 36.000 0.00 0.00 0.00 3.62
3430 9356 6.559810 CATCACAAGGCATTTTATTAACGGA 58.440 36.000 0.00 0.00 0.00 4.69
3433 9359 9.533253 AATAGCATCACAAGGCATTTTATTAAC 57.467 29.630 0.00 0.00 33.71 2.01
3440 9366 8.042515 ACAATTAAATAGCATCACAAGGCATTT 58.957 29.630 0.00 0.00 33.71 2.32
3498 9425 1.884579 TGTCTGACTAGGTTCACGGTC 59.115 52.381 9.51 0.00 0.00 4.79
3501 9428 3.827625 CTTCTGTCTGACTAGGTTCACG 58.172 50.000 9.51 0.00 0.00 4.35
3504 9431 4.021894 TCAAGCTTCTGTCTGACTAGGTTC 60.022 45.833 9.51 0.00 0.00 3.62
3507 9434 4.734398 ATCAAGCTTCTGTCTGACTAGG 57.266 45.455 9.51 0.00 0.00 3.02
3513 9440 6.634805 TCTTACCTTATCAAGCTTCTGTCTG 58.365 40.000 0.00 0.00 0.00 3.51
3516 9443 6.613153 ACTCTTACCTTATCAAGCTTCTGT 57.387 37.500 0.00 0.00 0.00 3.41
3538 9465 5.403766 CCAAAGTGATAGATGACGCAGATAC 59.596 44.000 0.00 0.00 0.00 2.24
3543 9470 2.236146 ACCCAAAGTGATAGATGACGCA 59.764 45.455 0.00 0.00 0.00 5.24
3544 9471 2.906354 ACCCAAAGTGATAGATGACGC 58.094 47.619 0.00 0.00 0.00 5.19
3557 9484 1.067916 GTGGCTGTTGCACCCAAAG 59.932 57.895 0.00 0.00 41.91 2.77
3561 9488 2.652530 CATGTGGCTGTTGCACCC 59.347 61.111 0.00 0.00 41.91 4.61
3562 9489 1.252904 ATCCATGTGGCTGTTGCACC 61.253 55.000 0.00 0.00 41.91 5.01
3591 9518 4.519540 TCTGCTATTTTGAAAGGGCAAC 57.480 40.909 7.27 0.00 32.13 4.17
3594 9521 5.358160 ACTGTATCTGCTATTTTGAAAGGGC 59.642 40.000 0.00 0.00 0.00 5.19
3596 9523 6.238211 CGGACTGTATCTGCTATTTTGAAAGG 60.238 42.308 0.00 0.00 0.00 3.11
3597 9524 6.238211 CCGGACTGTATCTGCTATTTTGAAAG 60.238 42.308 0.00 0.00 31.52 2.62
3607 9534 2.786495 CCGCCGGACTGTATCTGCT 61.786 63.158 5.05 0.00 31.52 4.24
3608 9535 2.279517 CCGCCGGACTGTATCTGC 60.280 66.667 5.05 0.00 31.52 4.26
3626 9554 1.159285 CGGCAGCATCAGAAGTTTCA 58.841 50.000 0.00 0.00 0.00 2.69
3629 9557 3.583383 GCGGCAGCATCAGAAGTT 58.417 55.556 3.18 0.00 44.35 2.66
3674 9602 3.126171 TGATTCAAATACGCCTTCGGTTG 59.874 43.478 0.00 0.00 40.69 3.77
3680 9608 2.422127 CCCGTTGATTCAAATACGCCTT 59.578 45.455 0.00 0.00 32.97 4.35
3694 9622 0.948623 CGTTCTGCATCACCCGTTGA 60.949 55.000 0.00 0.00 39.11 3.18
3697 9625 1.667830 CACGTTCTGCATCACCCGT 60.668 57.895 0.00 0.00 0.00 5.28
3698 9626 3.027170 GCACGTTCTGCATCACCCG 62.027 63.158 0.00 0.00 46.29 5.28
3706 9634 2.474712 GCCTAACGCACGTTCTGC 59.525 61.111 12.27 12.08 43.21 4.26
3718 9646 3.499157 ACAAAGCAATACGAAACGCCTAA 59.501 39.130 0.00 0.00 0.00 2.69
3719 9647 3.068560 ACAAAGCAATACGAAACGCCTA 58.931 40.909 0.00 0.00 0.00 3.93
3720 9648 1.877443 ACAAAGCAATACGAAACGCCT 59.123 42.857 0.00 0.00 0.00 5.52
3721 9649 2.325509 ACAAAGCAATACGAAACGCC 57.674 45.000 0.00 0.00 0.00 5.68
3723 9651 3.121496 GGCAAACAAAGCAATACGAAACG 60.121 43.478 0.00 0.00 0.00 3.60
3728 9656 2.723124 AGGGCAAACAAAGCAATACG 57.277 45.000 0.00 0.00 0.00 3.06
3729 9657 5.072040 ACATAGGGCAAACAAAGCAATAC 57.928 39.130 0.00 0.00 0.00 1.89
3730 9658 5.736951 AACATAGGGCAAACAAAGCAATA 57.263 34.783 0.00 0.00 0.00 1.90
3731 9659 4.622260 AACATAGGGCAAACAAAGCAAT 57.378 36.364 0.00 0.00 0.00 3.56
3732 9660 4.376146 GAAACATAGGGCAAACAAAGCAA 58.624 39.130 0.00 0.00 0.00 3.91
3734 9662 2.986479 CGAAACATAGGGCAAACAAAGC 59.014 45.455 0.00 0.00 0.00 3.51
3735 9663 3.980775 CACGAAACATAGGGCAAACAAAG 59.019 43.478 0.00 0.00 0.00 2.77
3736 9664 3.381908 ACACGAAACATAGGGCAAACAAA 59.618 39.130 0.00 0.00 0.00 2.83
3739 9667 2.920647 GCACACGAAACATAGGGCAAAC 60.921 50.000 0.00 0.00 0.00 2.93
3741 9669 0.878416 GCACACGAAACATAGGGCAA 59.122 50.000 0.00 0.00 0.00 4.52
3745 9673 1.135689 GGCAAGCACACGAAACATAGG 60.136 52.381 0.00 0.00 0.00 2.57
3748 9676 1.659794 GGGCAAGCACACGAAACAT 59.340 52.632 0.00 0.00 0.00 2.71
3758 9705 0.966875 AAATGATGAGCGGGCAAGCA 60.967 50.000 6.94 0.00 40.15 3.91
3759 9706 0.174162 AAAATGATGAGCGGGCAAGC 59.826 50.000 0.00 0.00 37.41 4.01
3763 9710 0.248784 GCTGAAAATGATGAGCGGGC 60.249 55.000 0.00 0.00 0.00 6.13
3766 9713 1.533338 GCCTGCTGAAAATGATGAGCG 60.533 52.381 0.00 0.00 33.97 5.03
3767 9714 1.749634 AGCCTGCTGAAAATGATGAGC 59.250 47.619 0.00 0.00 0.00 4.26
3768 9715 2.753452 ACAGCCTGCTGAAAATGATGAG 59.247 45.455 24.88 0.00 46.30 2.90
3771 9718 1.741706 CGACAGCCTGCTGAAAATGAT 59.258 47.619 24.88 0.90 46.30 2.45
3774 9721 0.607489 AGCGACAGCCTGCTGAAAAT 60.607 50.000 24.88 2.82 46.30 1.82
3777 9724 1.962822 CAAGCGACAGCCTGCTGAA 60.963 57.895 24.88 0.00 46.30 3.02
3778 9725 2.357881 CAAGCGACAGCCTGCTGA 60.358 61.111 24.88 0.00 46.30 4.26
3782 9729 1.376424 ATCACCAAGCGACAGCCTG 60.376 57.895 0.00 0.00 46.67 4.85
3786 9733 3.002791 ACATAACATCACCAAGCGACAG 58.997 45.455 0.00 0.00 0.00 3.51
3787 9734 3.052455 ACATAACATCACCAAGCGACA 57.948 42.857 0.00 0.00 0.00 4.35
3788 9735 4.181578 ACTACATAACATCACCAAGCGAC 58.818 43.478 0.00 0.00 0.00 5.19
3790 9737 4.209288 GCTACTACATAACATCACCAAGCG 59.791 45.833 0.00 0.00 0.00 4.68
3792 9739 6.763135 ACATGCTACTACATAACATCACCAAG 59.237 38.462 0.00 0.00 0.00 3.61
3793 9740 6.649155 ACATGCTACTACATAACATCACCAA 58.351 36.000 0.00 0.00 0.00 3.67
3795 9742 6.202954 GGAACATGCTACTACATAACATCACC 59.797 42.308 0.00 0.00 0.00 4.02
3798 9745 7.210174 TCTGGAACATGCTACTACATAACATC 58.790 38.462 0.00 0.00 38.20 3.06
3799 9746 7.124573 TCTGGAACATGCTACTACATAACAT 57.875 36.000 0.00 0.00 38.20 2.71
3800 9747 6.406961 CCTCTGGAACATGCTACTACATAACA 60.407 42.308 0.00 0.00 38.20 2.41
3801 9748 5.986135 CCTCTGGAACATGCTACTACATAAC 59.014 44.000 0.00 0.00 38.20 1.89
3803 9750 5.454966 TCCTCTGGAACATGCTACTACATA 58.545 41.667 0.00 0.00 38.20 2.29
3804 9751 4.290093 TCCTCTGGAACATGCTACTACAT 58.710 43.478 0.00 0.00 38.20 2.29
3805 9752 3.708451 TCCTCTGGAACATGCTACTACA 58.292 45.455 0.00 0.00 38.20 2.74
3806 9753 4.737855 TTCCTCTGGAACATGCTACTAC 57.262 45.455 0.00 0.00 36.71 2.73
3807 9754 4.962362 TCATTCCTCTGGAACATGCTACTA 59.038 41.667 0.71 0.00 45.07 1.82
3808 9755 3.776969 TCATTCCTCTGGAACATGCTACT 59.223 43.478 0.71 0.00 45.07 2.57
3812 9759 3.067742 CCATTCATTCCTCTGGAACATGC 59.932 47.826 0.71 0.00 45.07 4.06
3813 9760 4.097437 CACCATTCATTCCTCTGGAACATG 59.903 45.833 0.71 0.00 45.07 3.21
3814 9761 4.264083 ACACCATTCATTCCTCTGGAACAT 60.264 41.667 0.71 0.00 45.07 2.71
3816 9763 3.441572 CACACCATTCATTCCTCTGGAAC 59.558 47.826 0.71 0.00 45.07 3.62
3817 9764 3.074390 ACACACCATTCATTCCTCTGGAA 59.926 43.478 1.24 1.24 46.39 3.53
3818 9765 2.644299 ACACACCATTCATTCCTCTGGA 59.356 45.455 0.00 0.00 32.92 3.86
3819 9766 2.751259 CACACACCATTCATTCCTCTGG 59.249 50.000 0.00 0.00 34.84 3.86
3820 9767 3.678289 TCACACACCATTCATTCCTCTG 58.322 45.455 0.00 0.00 0.00 3.35
3821 9768 4.581309 ATCACACACCATTCATTCCTCT 57.419 40.909 0.00 0.00 0.00 3.69
3822 9769 5.295292 CAGTATCACACACCATTCATTCCTC 59.705 44.000 0.00 0.00 0.00 3.71
3824 9771 4.943705 ACAGTATCACACACCATTCATTCC 59.056 41.667 0.00 0.00 0.00 3.01
3825 9772 5.643348 TGACAGTATCACACACCATTCATTC 59.357 40.000 0.00 0.00 29.99 2.67
3826 9773 5.559770 TGACAGTATCACACACCATTCATT 58.440 37.500 0.00 0.00 29.99 2.57
3827 9774 5.164620 TGACAGTATCACACACCATTCAT 57.835 39.130 0.00 0.00 29.99 2.57
3828 9775 4.563374 CCTGACAGTATCACACACCATTCA 60.563 45.833 0.93 0.00 32.37 2.57
3829 9776 3.935203 CCTGACAGTATCACACACCATTC 59.065 47.826 0.93 0.00 32.37 2.67
3830 9777 3.869912 GCCTGACAGTATCACACACCATT 60.870 47.826 0.93 0.00 32.37 3.16
3831 9778 2.355108 GCCTGACAGTATCACACACCAT 60.355 50.000 0.93 0.00 32.37 3.55
3832 9779 1.001974 GCCTGACAGTATCACACACCA 59.998 52.381 0.93 0.00 32.37 4.17
3833 9780 1.276421 AGCCTGACAGTATCACACACC 59.724 52.381 0.93 0.00 32.37 4.16
3834 9781 2.029020 TGAGCCTGACAGTATCACACAC 60.029 50.000 0.93 0.00 32.37 3.82
3835 9782 2.232208 CTGAGCCTGACAGTATCACACA 59.768 50.000 0.93 0.00 32.37 3.72
3836 9783 2.886081 CTGAGCCTGACAGTATCACAC 58.114 52.381 0.93 0.00 32.37 3.82
3837 9784 1.205655 GCTGAGCCTGACAGTATCACA 59.794 52.381 0.93 0.00 37.64 3.58
3838 9785 1.205655 TGCTGAGCCTGACAGTATCAC 59.794 52.381 0.23 1.99 37.64 3.06
3839 9786 1.479730 CTGCTGAGCCTGACAGTATCA 59.520 52.381 0.23 4.38 37.64 2.15
3840 9787 1.805871 GCTGCTGAGCCTGACAGTATC 60.806 57.143 0.23 0.00 39.57 2.24
3841 9788 0.177604 GCTGCTGAGCCTGACAGTAT 59.822 55.000 0.23 0.00 39.57 2.12
3842 9789 1.593787 GCTGCTGAGCCTGACAGTA 59.406 57.895 0.23 0.00 39.57 2.74
3843 9790 2.346739 GCTGCTGAGCCTGACAGT 59.653 61.111 0.23 0.00 39.57 3.55
3865 9812 5.939764 AGACACAAAGGAGTGAGCATATA 57.060 39.130 0.57 0.00 42.05 0.86
3873 9820 9.469807 GAGATTATACATAGACACAAAGGAGTG 57.530 37.037 0.00 0.00 44.93 3.51
3874 9821 9.427821 AGAGATTATACATAGACACAAAGGAGT 57.572 33.333 0.00 0.00 0.00 3.85
3875 9822 9.689976 CAGAGATTATACATAGACACAAAGGAG 57.310 37.037 0.00 0.00 0.00 3.69
3877 9824 7.386299 GGCAGAGATTATACATAGACACAAAGG 59.614 40.741 0.00 0.00 0.00 3.11
3880 9827 7.603180 AGGCAGAGATTATACATAGACACAA 57.397 36.000 0.00 0.00 0.00 3.33
3884 9831 6.696411 AGCAAGGCAGAGATTATACATAGAC 58.304 40.000 0.00 0.00 0.00 2.59
3885 9832 6.349694 CGAGCAAGGCAGAGATTATACATAGA 60.350 42.308 0.00 0.00 0.00 1.98
3886 9833 5.804473 CGAGCAAGGCAGAGATTATACATAG 59.196 44.000 0.00 0.00 0.00 2.23
3887 9834 5.243954 ACGAGCAAGGCAGAGATTATACATA 59.756 40.000 0.00 0.00 0.00 2.29
3888 9835 4.039730 ACGAGCAAGGCAGAGATTATACAT 59.960 41.667 0.00 0.00 0.00 2.29
3896 9845 1.290324 GTCACGAGCAAGGCAGAGA 59.710 57.895 0.00 0.00 0.00 3.10
3897 9846 1.005748 TGTCACGAGCAAGGCAGAG 60.006 57.895 0.00 0.00 0.00 3.35
3899 9848 2.661566 CGTGTCACGAGCAAGGCAG 61.662 63.158 20.75 0.00 46.05 4.85
3902 9851 0.319211 TAACCGTGTCACGAGCAAGG 60.319 55.000 26.53 10.91 46.05 3.61
3906 9855 1.425412 AACATAACCGTGTCACGAGC 58.575 50.000 26.53 0.00 46.05 5.03
3911 9860 5.776173 AAATTGGAAACATAACCGTGTCA 57.224 34.783 0.00 0.00 42.32 3.58
3912 9861 5.341196 CGAAAATTGGAAACATAACCGTGTC 59.659 40.000 0.00 0.00 42.32 3.67
3914 9863 4.089351 GCGAAAATTGGAAACATAACCGTG 59.911 41.667 0.00 0.00 42.32 4.94
3915 9864 4.231439 GCGAAAATTGGAAACATAACCGT 58.769 39.130 0.00 0.00 42.32 4.83
3916 9865 3.299542 CGCGAAAATTGGAAACATAACCG 59.700 43.478 0.00 0.00 42.32 4.44
3920 9869 7.087639 AGAAATTCGCGAAAATTGGAAACATA 58.912 30.769 27.23 0.00 42.32 2.29
3925 9874 5.083389 CGTAGAAATTCGCGAAAATTGGAA 58.917 37.500 27.23 0.00 0.00 3.53
3926 9875 4.436317 CCGTAGAAATTCGCGAAAATTGGA 60.436 41.667 27.23 10.62 0.00 3.53
3928 9877 3.783943 CCCGTAGAAATTCGCGAAAATTG 59.216 43.478 27.23 11.60 0.00 2.32
3929 9878 3.181504 CCCCGTAGAAATTCGCGAAAATT 60.182 43.478 27.23 22.60 0.00 1.82
3930 9879 2.353579 CCCCGTAGAAATTCGCGAAAAT 59.646 45.455 27.23 17.43 0.00 1.82
3931 9880 1.733360 CCCCGTAGAAATTCGCGAAAA 59.267 47.619 27.23 3.73 0.00 2.29
3932 9881 1.361793 CCCCGTAGAAATTCGCGAAA 58.638 50.000 27.23 5.75 0.00 3.46
3933 9882 0.460635 CCCCCGTAGAAATTCGCGAA 60.461 55.000 25.66 25.66 0.00 4.70
3936 9885 2.531376 CGCCCCCGTAGAAATTCGC 61.531 63.158 0.00 0.00 0.00 4.70
3957 9906 4.609018 ATCGCAAGGATCCGCCGG 62.609 66.667 17.51 0.00 43.43 6.13
3958 9907 3.038417 GATCGCAAGGATCCGCCG 61.038 66.667 5.98 10.53 44.86 6.46
3964 9913 2.136878 AGCCGGAGATCGCAAGGAT 61.137 57.895 5.05 4.99 38.35 3.24
3965 9914 2.759973 AGCCGGAGATCGCAAGGA 60.760 61.111 5.05 0.00 37.59 3.36
3966 9915 2.587194 CAGCCGGAGATCGCAAGG 60.587 66.667 5.05 2.34 37.59 3.61
3967 9916 1.021390 AAACAGCCGGAGATCGCAAG 61.021 55.000 5.05 0.00 37.59 4.01
3968 9917 1.003839 AAACAGCCGGAGATCGCAA 60.004 52.632 5.05 0.00 37.59 4.85
3969 9918 1.741401 CAAACAGCCGGAGATCGCA 60.741 57.895 5.05 0.00 37.59 5.10
3970 9919 2.464459 CCAAACAGCCGGAGATCGC 61.464 63.158 5.05 0.00 37.59 4.58
3971 9920 1.218047 TCCAAACAGCCGGAGATCG 59.782 57.895 5.05 0.00 38.88 3.69
3976 9925 0.759959 TGTTACTCCAAACAGCCGGA 59.240 50.000 5.05 0.00 34.50 5.14
3977 9926 1.821216 ATGTTACTCCAAACAGCCGG 58.179 50.000 0.00 0.00 42.33 6.13
3978 9927 3.004315 ACAAATGTTACTCCAAACAGCCG 59.996 43.478 0.00 0.00 42.33 5.52
3979 9928 4.278419 AGACAAATGTTACTCCAAACAGCC 59.722 41.667 0.00 0.00 42.33 4.85
3992 9941 5.041191 ACTCCAGAGTTCAGACAAATGTT 57.959 39.130 0.00 0.00 38.83 2.71
3994 9943 5.991606 TGTTACTCCAGAGTTCAGACAAATG 59.008 40.000 5.49 0.00 42.54 2.32
3996 9945 5.607939 TGTTACTCCAGAGTTCAGACAAA 57.392 39.130 5.49 0.00 42.54 2.83
3997 9946 5.808366 ATGTTACTCCAGAGTTCAGACAA 57.192 39.130 5.49 0.00 42.54 3.18
4000 9949 6.042093 AGACAAATGTTACTCCAGAGTTCAGA 59.958 38.462 5.49 0.00 42.54 3.27
4001 9950 6.146837 CAGACAAATGTTACTCCAGAGTTCAG 59.853 42.308 5.49 0.00 42.54 3.02
4002 9951 5.991606 CAGACAAATGTTACTCCAGAGTTCA 59.008 40.000 5.49 6.71 42.54 3.18
4003 9952 6.223852 TCAGACAAATGTTACTCCAGAGTTC 58.776 40.000 5.49 1.22 42.54 3.01
4004 9953 6.174720 TCAGACAAATGTTACTCCAGAGTT 57.825 37.500 5.49 0.00 42.54 3.01
4005 9954 5.808366 TCAGACAAATGTTACTCCAGAGT 57.192 39.130 5.50 5.50 45.02 3.24
4008 9957 6.146837 CAGAGTTCAGACAAATGTTACTCCAG 59.853 42.308 0.00 0.00 35.48 3.86
4009 9958 5.991606 CAGAGTTCAGACAAATGTTACTCCA 59.008 40.000 0.00 0.00 35.48 3.86
4010 9959 5.409826 CCAGAGTTCAGACAAATGTTACTCC 59.590 44.000 0.00 0.00 35.48 3.85
4012 9961 5.930135 ACCAGAGTTCAGACAAATGTTACT 58.070 37.500 0.00 0.00 0.00 2.24
4013 9962 6.619801 AACCAGAGTTCAGACAAATGTTAC 57.380 37.500 0.00 0.00 0.00 2.50
4014 9963 7.936847 ACATAACCAGAGTTCAGACAAATGTTA 59.063 33.333 0.00 0.00 37.42 2.41
4015 9964 6.772716 ACATAACCAGAGTTCAGACAAATGTT 59.227 34.615 0.00 0.00 37.42 2.71
4016 9965 6.205464 CACATAACCAGAGTTCAGACAAATGT 59.795 38.462 0.00 0.00 37.42 2.71
4017 9966 6.205464 ACACATAACCAGAGTTCAGACAAATG 59.795 38.462 0.00 0.00 37.42 2.32
4018 9967 6.205464 CACACATAACCAGAGTTCAGACAAAT 59.795 38.462 0.00 0.00 37.42 2.32
4019 9968 5.527214 CACACATAACCAGAGTTCAGACAAA 59.473 40.000 0.00 0.00 37.42 2.83
4020 9969 5.056480 CACACATAACCAGAGTTCAGACAA 58.944 41.667 0.00 0.00 37.42 3.18
4021 9970 4.100963 ACACACATAACCAGAGTTCAGACA 59.899 41.667 0.00 0.00 37.42 3.41
4022 9971 4.632153 ACACACATAACCAGAGTTCAGAC 58.368 43.478 0.00 0.00 37.42 3.51
4024 9973 5.989168 TGTAACACACATAACCAGAGTTCAG 59.011 40.000 0.00 0.00 32.75 3.02
4025 9974 5.919755 TGTAACACACATAACCAGAGTTCA 58.080 37.500 0.00 0.00 32.75 3.18
4043 10053 4.705337 TGAAAAAGGTGGTGTGTGTAAC 57.295 40.909 0.00 0.00 37.35 2.50
4047 10058 4.286910 CGTAATGAAAAAGGTGGTGTGTG 58.713 43.478 0.00 0.00 0.00 3.82
4056 10067 5.682943 TGAGTTGACCGTAATGAAAAAGG 57.317 39.130 0.00 0.00 0.00 3.11
4061 10072 3.810941 GGTGTTGAGTTGACCGTAATGAA 59.189 43.478 0.00 0.00 0.00 2.57
4066 10077 3.573569 CGGTGTTGAGTTGACCGTA 57.426 52.632 0.00 0.00 46.11 4.02
4083 10099 0.713883 CTTCGGATTCGGAACACACG 59.286 55.000 2.79 0.00 36.95 4.49
4084 10100 1.076332 CCTTCGGATTCGGAACACAC 58.924 55.000 2.79 0.00 36.95 3.82
4089 10105 1.734163 GAAAGCCTTCGGATTCGGAA 58.266 50.000 6.51 6.51 36.95 4.30
4110 10126 4.468095 ACATATTTTCTTCATACGGCGC 57.532 40.909 6.90 0.00 0.00 6.53
4113 10129 7.471721 TGAGCAAACATATTTTCTTCATACGG 58.528 34.615 0.00 0.00 0.00 4.02
4114 10130 9.162793 GATGAGCAAACATATTTTCTTCATACG 57.837 33.333 0.00 0.00 0.00 3.06
4119 10135 7.765307 TGGAGATGAGCAAACATATTTTCTTC 58.235 34.615 0.00 0.00 0.00 2.87
4120 10136 7.707624 TGGAGATGAGCAAACATATTTTCTT 57.292 32.000 0.00 0.00 0.00 2.52
4121 10137 7.707624 TTGGAGATGAGCAAACATATTTTCT 57.292 32.000 0.00 0.00 0.00 2.52
4122 10138 8.761575 TTTTGGAGATGAGCAAACATATTTTC 57.238 30.769 0.00 0.00 0.00 2.29
4123 10139 8.992073 GTTTTTGGAGATGAGCAAACATATTTT 58.008 29.630 0.00 0.00 0.00 1.82
4124 10140 8.149647 TGTTTTTGGAGATGAGCAAACATATTT 58.850 29.630 0.00 0.00 31.00 1.40
4125 10141 7.669427 TGTTTTTGGAGATGAGCAAACATATT 58.331 30.769 0.00 0.00 31.00 1.28
4126 10142 7.177216 TCTGTTTTTGGAGATGAGCAAACATAT 59.823 33.333 0.00 0.00 34.52 1.78
4127 10143 6.489700 TCTGTTTTTGGAGATGAGCAAACATA 59.510 34.615 0.00 0.00 34.52 2.29
4128 10144 5.302568 TCTGTTTTTGGAGATGAGCAAACAT 59.697 36.000 0.00 0.00 34.52 2.71
4129 10145 4.644234 TCTGTTTTTGGAGATGAGCAAACA 59.356 37.500 0.00 0.00 34.03 2.83
4130 10146 5.186996 TCTGTTTTTGGAGATGAGCAAAC 57.813 39.130 0.00 0.00 0.00 2.93
4131 10147 6.218019 CAATCTGTTTTTGGAGATGAGCAAA 58.782 36.000 0.00 0.00 0.00 3.68
4132 10148 5.775686 CAATCTGTTTTTGGAGATGAGCAA 58.224 37.500 0.00 0.00 0.00 3.91
4133 10149 4.321452 GCAATCTGTTTTTGGAGATGAGCA 60.321 41.667 0.00 0.00 33.75 4.26
4134 10150 4.082354 AGCAATCTGTTTTTGGAGATGAGC 60.082 41.667 0.00 0.00 33.75 4.26
4135 10151 5.640189 AGCAATCTGTTTTTGGAGATGAG 57.360 39.130 0.00 0.00 0.00 2.90
4136 10152 5.415701 GGTAGCAATCTGTTTTTGGAGATGA 59.584 40.000 0.00 0.00 0.00 2.92
4137 10153 5.416952 AGGTAGCAATCTGTTTTTGGAGATG 59.583 40.000 0.00 0.00 0.00 2.90
4138 10154 5.574188 AGGTAGCAATCTGTTTTTGGAGAT 58.426 37.500 0.00 0.00 0.00 2.75
4139 10155 4.985538 AGGTAGCAATCTGTTTTTGGAGA 58.014 39.130 0.00 0.00 0.00 3.71
4140 10156 5.705441 TGTAGGTAGCAATCTGTTTTTGGAG 59.295 40.000 0.00 0.00 0.00 3.86
4141 10157 5.626142 TGTAGGTAGCAATCTGTTTTTGGA 58.374 37.500 0.00 0.00 0.00 3.53
4142 10158 5.957842 TGTAGGTAGCAATCTGTTTTTGG 57.042 39.130 0.00 0.00 0.00 3.28
4143 10159 6.913170 ACATGTAGGTAGCAATCTGTTTTTG 58.087 36.000 0.00 0.00 0.00 2.44
4144 10160 8.630054 TTACATGTAGGTAGCAATCTGTTTTT 57.370 30.769 5.56 0.00 0.00 1.94
4145 10161 8.807948 ATTACATGTAGGTAGCAATCTGTTTT 57.192 30.769 5.56 0.00 0.00 2.43
4146 10162 8.807948 AATTACATGTAGGTAGCAATCTGTTT 57.192 30.769 5.56 0.00 0.00 2.83
4147 10163 8.807948 AAATTACATGTAGGTAGCAATCTGTT 57.192 30.769 5.56 0.00 0.00 3.16
4148 10164 8.807948 AAAATTACATGTAGGTAGCAATCTGT 57.192 30.769 5.56 0.00 0.00 3.41
4185 10201 3.403038 ACAGACACATTTCTACACCAGC 58.597 45.455 0.00 0.00 0.00 4.85
4186 10202 6.223852 ACTTACAGACACATTTCTACACCAG 58.776 40.000 0.00 0.00 0.00 4.00
4187 10203 6.169557 ACTTACAGACACATTTCTACACCA 57.830 37.500 0.00 0.00 0.00 4.17
4188 10204 7.148623 GCTTACTTACAGACACATTTCTACACC 60.149 40.741 0.00 0.00 0.00 4.16
4189 10205 7.148623 GGCTTACTTACAGACACATTTCTACAC 60.149 40.741 0.00 0.00 0.00 2.90
4190 10206 6.872020 GGCTTACTTACAGACACATTTCTACA 59.128 38.462 0.00 0.00 0.00 2.74
4191 10207 6.872020 TGGCTTACTTACAGACACATTTCTAC 59.128 38.462 0.00 0.00 0.00 2.59
4192 10208 6.999950 TGGCTTACTTACAGACACATTTCTA 58.000 36.000 0.00 0.00 0.00 2.10
4193 10209 5.865085 TGGCTTACTTACAGACACATTTCT 58.135 37.500 0.00 0.00 0.00 2.52
4199 10239 3.600388 AGCATGGCTTACTTACAGACAC 58.400 45.455 0.00 0.00 33.89 3.67
4203 10243 4.399004 AGAGAGCATGGCTTACTTACAG 57.601 45.455 0.00 0.00 39.88 2.74
4214 10262 2.360483 TCGCTTCTAGAAGAGAGCATGG 59.640 50.000 32.16 8.56 41.23 3.66
4237 10285 3.604875 TTAAGCTGCTACTACCACCAC 57.395 47.619 0.90 0.00 0.00 4.16
4238 10286 4.837093 AATTAAGCTGCTACTACCACCA 57.163 40.909 0.90 0.00 0.00 4.17
4239 10287 5.179555 GCATAATTAAGCTGCTACTACCACC 59.820 44.000 0.90 0.00 33.15 4.61
4252 10300 5.048224 AGCATCCACATCAGCATAATTAAGC 60.048 40.000 4.51 4.51 0.00 3.09
4279 10365 0.665835 CTAGAGCTGTCTGGCTACCG 59.334 60.000 0.00 0.00 43.20 4.02
4428 10517 2.341846 ACAGCCCGGTGGTATTATTG 57.658 50.000 0.00 0.00 0.00 1.90
4436 10525 0.243636 GATTGAAAACAGCCCGGTGG 59.756 55.000 0.00 0.00 0.00 4.61
4441 10530 4.279420 AGAAAGTGAGATTGAAAACAGCCC 59.721 41.667 0.00 0.00 0.00 5.19
4466 10555 4.078639 AGCAGCCTGGTCATATCTTTAC 57.921 45.455 0.00 0.00 0.00 2.01
4517 10606 4.013728 TGTGCGGCATAACTAGGATTTTT 58.986 39.130 5.72 0.00 0.00 1.94
4518 10607 3.616219 TGTGCGGCATAACTAGGATTTT 58.384 40.909 5.72 0.00 0.00 1.82
4519 10608 3.275617 TGTGCGGCATAACTAGGATTT 57.724 42.857 5.72 0.00 0.00 2.17
4520 10609 3.275617 TTGTGCGGCATAACTAGGATT 57.724 42.857 5.72 0.00 0.00 3.01
4521 10610 3.492102 ATTGTGCGGCATAACTAGGAT 57.508 42.857 14.48 0.00 0.00 3.24
4606 10695 6.069673 CCCCCAGTATATGAAATGGCATAGTA 60.070 42.308 0.00 0.00 34.50 1.82
4607 10696 5.281193 CCCCCAGTATATGAAATGGCATAGT 60.281 44.000 0.00 0.00 34.50 2.12
4608 10697 5.044919 TCCCCCAGTATATGAAATGGCATAG 60.045 44.000 0.00 0.00 34.50 2.23
4609 10698 4.855018 TCCCCCAGTATATGAAATGGCATA 59.145 41.667 0.00 0.00 35.41 3.14
4610 10699 3.662148 TCCCCCAGTATATGAAATGGCAT 59.338 43.478 0.00 0.00 0.00 4.40
4660 10751 5.599999 AGTGAGTCCTACATTGACATACC 57.400 43.478 0.00 0.00 35.15 2.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.