Multiple sequence alignment - TraesCS6A01G018400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G018400 chr6A 100.000 5283 0 0 1 5283 9016592 9011310 0.000000e+00 9756.0
1 TraesCS6A01G018400 chr6A 82.394 852 122 16 794 1636 1757852 1757020 0.000000e+00 717.0
2 TraesCS6A01G018400 chr6A 94.245 139 8 0 5145 5283 233003752 233003890 4.140000e-51 213.0
3 TraesCS6A01G018400 chr6D 96.293 4262 132 13 794 5037 24751675 24747422 0.000000e+00 6972.0
4 TraesCS6A01G018400 chr6D 83.307 2570 400 23 1652 4217 424064 421520 0.000000e+00 2342.0
5 TraesCS6A01G018400 chr6D 84.259 1944 275 14 1652 3581 2749980 2748054 0.000000e+00 1866.0
6 TraesCS6A01G018400 chr6D 80.976 799 125 15 858 1648 400706 399927 4.520000e-170 608.0
7 TraesCS6A01G018400 chr6D 83.744 609 89 8 930 1538 687620 688218 7.680000e-158 568.0
8 TraesCS6A01G018400 chr6D 95.146 206 9 1 223 428 15786078 15786282 1.840000e-84 324.0
9 TraesCS6A01G018400 chr6D 94.326 141 6 2 5143 5282 455990847 455990986 1.150000e-51 215.0
10 TraesCS6A01G018400 chr6D 93.506 77 5 0 719 795 460808093 460808169 1.200000e-21 115.0
11 TraesCS6A01G018400 chr6D 88.506 87 3 2 1028 1107 24752691 24752605 1.210000e-16 99.0
12 TraesCS6A01G018400 chr6B 96.287 4175 147 3 821 4995 15277747 15273581 0.000000e+00 6844.0
13 TraesCS6A01G018400 chr6B 79.721 789 141 18 862 1645 2716261 2717035 2.150000e-153 553.0
14 TraesCS6A01G018400 chr6B 96.954 197 6 0 232 428 418799556 418799360 1.100000e-86 331.0
15 TraesCS6A01G018400 chr6B 92.958 142 8 2 5143 5283 715292319 715292179 6.940000e-49 206.0
16 TraesCS6A01G018400 chr6B 78.136 279 45 12 4433 4703 186568753 186568483 4.230000e-36 163.0
17 TraesCS6A01G018400 chr6B 91.209 91 4 3 722 810 126924471 126924383 2.580000e-23 121.0
18 TraesCS6A01G018400 chr6B 93.750 80 5 0 719 798 637124774 637124853 2.580000e-23 121.0
19 TraesCS6A01G018400 chr6B 93.671 79 5 0 722 800 660144057 660143979 9.290000e-23 119.0
20 TraesCS6A01G018400 chr6B 86.538 104 11 3 694 795 542171871 542171769 1.560000e-20 111.0
21 TraesCS6A01G018400 chr1B 88.008 2585 304 6 1633 4215 2917468 2920048 0.000000e+00 3051.0
22 TraesCS6A01G018400 chr1B 84.011 738 107 6 796 1530 2915892 2916621 0.000000e+00 699.0
23 TraesCS6A01G018400 chr1B 94.406 143 6 1 5143 5283 592491918 592492060 8.910000e-53 219.0
24 TraesCS6A01G018400 chr1B 93.617 141 7 1 5145 5283 592494330 592494470 5.360000e-50 209.0
25 TraesCS6A01G018400 chr1B 94.805 77 4 0 722 798 380259928 380259852 2.580000e-23 121.0
26 TraesCS6A01G018400 chr1B 94.805 77 4 0 722 798 509376410 509376334 2.580000e-23 121.0
27 TraesCS6A01G018400 chr1B 90.909 88 6 1 719 804 275498543 275498630 3.340000e-22 117.0
28 TraesCS6A01G018400 chr1B 87.952 83 8 2 4870 4950 149866655 149866573 4.350000e-16 97.1
29 TraesCS6A01G018400 chr4B 85.637 2590 353 18 1643 4223 650656511 650659090 0.000000e+00 2704.0
30 TraesCS6A01G018400 chr4B 80.216 647 114 5 1000 1645 650655952 650656585 1.720000e-129 473.0
31 TraesCS6A01G018400 chr4B 90.196 204 20 0 31 234 37402517 37402720 3.140000e-67 267.0
32 TraesCS6A01G018400 chr4B 97.297 74 2 0 722 795 21577331 21577258 5.550000e-25 126.0
33 TraesCS6A01G018400 chr4B 94.805 77 4 0 719 795 68663807 68663883 2.580000e-23 121.0
34 TraesCS6A01G018400 chr4B 95.946 74 3 0 722 795 536012482 536012555 2.580000e-23 121.0
35 TraesCS6A01G018400 chr4B 93.506 77 5 0 719 795 37402713 37402789 1.200000e-21 115.0
36 TraesCS6A01G018400 chr4B 91.463 82 7 0 719 800 652975281 652975362 4.320000e-21 113.0
37 TraesCS6A01G018400 chr4B 86.538 104 11 3 694 795 33742799 33742901 1.560000e-20 111.0
38 TraesCS6A01G018400 chr4B 90.244 82 7 1 715 795 558183692 558183611 7.240000e-19 106.0
39 TraesCS6A01G018400 chr4B 85.577 104 12 3 694 795 622192075 622192177 7.240000e-19 106.0
40 TraesCS6A01G018400 chr4B 86.747 83 9 2 4870 4950 213986692 213986610 2.030000e-14 91.6
41 TraesCS6A01G018400 chr4B 86.747 83 9 2 4870 4950 213994895 213994813 2.030000e-14 91.6
42 TraesCS6A01G018400 chr5D 85.476 2582 356 15 1643 4217 369019466 369022035 0.000000e+00 2673.0
43 TraesCS6A01G018400 chr3A 85.300 2551 350 20 1682 4223 23648650 23646116 0.000000e+00 2610.0
44 TraesCS6A01G018400 chr3A 96.071 280 11 0 445 724 587906941 587906662 1.730000e-124 457.0
45 TraesCS6A01G018400 chr3A 96.954 197 6 0 232 428 385575342 385575146 1.100000e-86 331.0
46 TraesCS6A01G018400 chr3A 90.667 75 6 1 4877 4950 39145819 39145745 1.210000e-16 99.0
47 TraesCS6A01G018400 chrUn 84.687 2586 368 19 1656 4217 94836948 94839529 0.000000e+00 2556.0
48 TraesCS6A01G018400 chrUn 94.667 75 4 0 719 793 358211142 358211216 3.340000e-22 117.0
49 TraesCS6A01G018400 chrUn 93.506 77 5 0 719 795 31477176 31477252 1.200000e-21 115.0
50 TraesCS6A01G018400 chrUn 94.595 74 4 0 722 795 40943357 40943284 1.200000e-21 115.0
51 TraesCS6A01G018400 chrUn 93.506 77 5 0 719 795 63677036 63677112 1.200000e-21 115.0
52 TraesCS6A01G018400 chrUn 92.208 77 6 0 719 795 31198947 31199023 5.590000e-20 110.0
53 TraesCS6A01G018400 chrUn 92.208 77 6 0 719 795 36486392 36486468 5.590000e-20 110.0
54 TraesCS6A01G018400 chr4A 84.540 2568 380 16 1658 4217 730948224 730950782 0.000000e+00 2527.0
55 TraesCS6A01G018400 chr4A 83.742 775 118 8 868 1637 730947504 730948275 0.000000e+00 726.0
56 TraesCS6A01G018400 chr4A 94.245 139 7 1 5146 5283 20241558 20241696 1.490000e-50 211.0
57 TraesCS6A01G018400 chr4A 86.325 117 12 2 4188 4300 657198770 657198886 2.000000e-24 124.0
58 TraesCS6A01G018400 chr4A 92.771 83 6 0 722 804 472947054 472946972 2.580000e-23 121.0
59 TraesCS6A01G018400 chr7D 84.463 2568 382 16 1658 4217 9183020 9185578 0.000000e+00 2516.0
60 TraesCS6A01G018400 chr7D 84.303 739 109 6 901 1637 9182338 9183071 0.000000e+00 715.0
61 TraesCS6A01G018400 chr7D 96.954 197 6 0 232 428 125335104 125334908 1.100000e-86 331.0
62 TraesCS6A01G018400 chr2A 96.416 279 10 0 446 724 61973569 61973291 1.340000e-125 460.0
63 TraesCS6A01G018400 chr2A 95.760 283 12 0 442 724 214842239 214842521 1.730000e-124 457.0
64 TraesCS6A01G018400 chr2A 90.196 204 20 0 31 234 641966319 641966522 3.140000e-67 267.0
65 TraesCS6A01G018400 chr2A 94.286 140 7 1 5145 5283 745753785 745753646 4.140000e-51 213.0
66 TraesCS6A01G018400 chr2A 93.571 140 8 1 5145 5283 165008301 165008162 1.930000e-49 207.0
67 TraesCS6A01G018400 chr2A 92.857 84 6 0 722 805 195070942 195070859 7.180000e-24 122.0
68 TraesCS6A01G018400 chr1A 96.416 279 10 0 446 724 444351433 444351155 1.340000e-125 460.0
69 TraesCS6A01G018400 chr1A 95.215 209 8 2 220 428 509012167 509012373 3.940000e-86 329.0
70 TraesCS6A01G018400 chr1A 95.946 74 3 0 722 795 70494944 70494871 2.580000e-23 121.0
71 TraesCS6A01G018400 chr7A 95.745 282 12 0 445 726 641431263 641430982 6.240000e-124 455.0
72 TraesCS6A01G018400 chr3B 88.189 381 35 4 419 795 389770114 389769740 3.750000e-121 446.0
73 TraesCS6A01G018400 chr3B 91.089 202 18 0 33 234 520934719 520934518 1.870000e-69 274.0
74 TraesCS6A01G018400 chr3B 77.936 281 46 12 4433 4705 563456189 563455917 1.520000e-35 161.0
75 TraesCS6A01G018400 chr3B 87.952 83 8 2 4870 4950 355885710 355885628 4.350000e-16 97.1
76 TraesCS6A01G018400 chr2B 83.367 499 59 10 303 798 782691927 782691450 1.750000e-119 440.0
77 TraesCS6A01G018400 chr2B 84.097 371 55 4 58 426 782691969 782691601 6.510000e-94 355.0
78 TraesCS6A01G018400 chr2B 83.166 398 43 9 32 428 236886544 236886170 5.070000e-90 342.0
79 TraesCS6A01G018400 chr2B 90.686 204 19 0 31 234 339116325 339116122 6.740000e-69 272.0
80 TraesCS6A01G018400 chr2B 90.196 204 20 0 31 234 712896067 712896270 3.140000e-67 267.0
81 TraesCS6A01G018400 chr2B 93.662 142 8 1 5143 5283 384051329 384051470 1.490000e-50 211.0
82 TraesCS6A01G018400 chr2B 87.288 118 13 2 683 800 93898672 93898557 3.320000e-27 134.0
83 TraesCS6A01G018400 chr2B 87.952 83 10 0 4868 4950 392424075 392424157 1.210000e-16 99.0
84 TraesCS6A01G018400 chr5B 91.049 324 25 3 419 740 477555869 477556190 8.130000e-118 435.0
85 TraesCS6A01G018400 chr5B 78.214 280 45 12 4434 4705 346237386 346237657 1.180000e-36 165.0
86 TraesCS6A01G018400 chr5B 78.214 280 45 12 4434 4705 698989191 698989462 1.180000e-36 165.0
87 TraesCS6A01G018400 chr5B 77.936 281 44 14 4434 4705 698997237 698997508 5.480000e-35 159.0
88 TraesCS6A01G018400 chr5B 92.771 83 6 0 719 801 311780282 311780364 2.580000e-23 121.0
89 TraesCS6A01G018400 chr7B 89.881 336 30 2 419 752 274229698 274230031 3.780000e-116 429.0
90 TraesCS6A01G018400 chr7B 82.379 227 24 12 4434 4652 513968570 513968352 3.250000e-42 183.0
91 TraesCS6A01G018400 chr7B 87.069 116 13 2 680 795 274229769 274229656 4.290000e-26 130.0
92 TraesCS6A01G018400 chr7B 87.654 81 6 3 4868 4944 299421950 299422030 2.030000e-14 91.6
93 TraesCS6A01G018400 chr5A 97.462 197 5 0 232 428 608041430 608041626 2.360000e-88 337.0
94 TraesCS6A01G018400 chr5A 96.104 77 3 0 719 795 593601266 593601342 5.550000e-25 126.0
95 TraesCS6A01G018400 chr3D 96.954 197 6 0 232 428 1327590 1327394 1.100000e-86 331.0
96 TraesCS6A01G018400 chr3D 96.059 203 8 0 226 428 505973691 505973489 1.100000e-86 331.0
97 TraesCS6A01G018400 chr3D 85.577 104 12 3 694 795 333949500 333949602 7.240000e-19 106.0
98 TraesCS6A01G018400 chr1D 92.574 202 15 0 31 232 452997356 452997557 1.860000e-74 291.0
99 TraesCS6A01G018400 chr1D 88.318 214 25 0 15 228 182288995 182289208 1.890000e-64 257.0
100 TraesCS6A01G018400 chr2D 80.000 280 43 10 4432 4705 241865408 241865136 1.500000e-45 195.0
101 TraesCS6A01G018400 chr4D 92.308 78 6 0 718 795 476879155 476879078 1.560000e-20 111.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G018400 chr6A 9011310 9016592 5282 True 9756.0 9756 100.0000 1 5283 1 chr6A.!!$R2 5282
1 TraesCS6A01G018400 chr6A 1757020 1757852 832 True 717.0 717 82.3940 794 1636 1 chr6A.!!$R1 842
2 TraesCS6A01G018400 chr6D 24747422 24752691 5269 True 3535.5 6972 92.3995 794 5037 2 chr6D.!!$R4 4243
3 TraesCS6A01G018400 chr6D 421520 424064 2544 True 2342.0 2342 83.3070 1652 4217 1 chr6D.!!$R2 2565
4 TraesCS6A01G018400 chr6D 2748054 2749980 1926 True 1866.0 1866 84.2590 1652 3581 1 chr6D.!!$R3 1929
5 TraesCS6A01G018400 chr6D 399927 400706 779 True 608.0 608 80.9760 858 1648 1 chr6D.!!$R1 790
6 TraesCS6A01G018400 chr6D 687620 688218 598 False 568.0 568 83.7440 930 1538 1 chr6D.!!$F1 608
7 TraesCS6A01G018400 chr6B 15273581 15277747 4166 True 6844.0 6844 96.2870 821 4995 1 chr6B.!!$R1 4174
8 TraesCS6A01G018400 chr6B 2716261 2717035 774 False 553.0 553 79.7210 862 1645 1 chr6B.!!$F1 783
9 TraesCS6A01G018400 chr1B 2915892 2920048 4156 False 1875.0 3051 86.0095 796 4215 2 chr1B.!!$F2 3419
10 TraesCS6A01G018400 chr1B 592491918 592494470 2552 False 214.0 219 94.0115 5143 5283 2 chr1B.!!$F3 140
11 TraesCS6A01G018400 chr4B 650655952 650659090 3138 False 1588.5 2704 82.9265 1000 4223 2 chr4B.!!$F7 3223
12 TraesCS6A01G018400 chr5D 369019466 369022035 2569 False 2673.0 2673 85.4760 1643 4217 1 chr5D.!!$F1 2574
13 TraesCS6A01G018400 chr3A 23646116 23648650 2534 True 2610.0 2610 85.3000 1682 4223 1 chr3A.!!$R1 2541
14 TraesCS6A01G018400 chrUn 94836948 94839529 2581 False 2556.0 2556 84.6870 1656 4217 1 chrUn.!!$F5 2561
15 TraesCS6A01G018400 chr4A 730947504 730950782 3278 False 1626.5 2527 84.1410 868 4217 2 chr4A.!!$F3 3349
16 TraesCS6A01G018400 chr7D 9182338 9185578 3240 False 1615.5 2516 84.3830 901 4217 2 chr7D.!!$F1 3316
17 TraesCS6A01G018400 chr2B 782691450 782691969 519 True 397.5 440 83.7320 58 798 2 chr2B.!!$R4 740

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
290 291 0.109597 CTTGGGACTCGCAAACATGC 60.110 55.000 9.59 0.0 35.96 4.06 F
467 468 0.179468 GGCTGCCCGTAATGGAAGTA 59.821 55.000 7.66 0.0 42.00 2.24 F
720 721 0.331616 ACTCCCCATTACAACCAGCC 59.668 55.000 0.00 0.0 0.00 4.85 F
1856 2934 1.047596 TTGGAAAGGCTTGGCTTGCA 61.048 50.000 15.42 0.0 0.00 4.08 F
2089 3174 3.568538 CAACTGCAGAAATTGGCACTAC 58.431 45.455 23.35 0.0 35.86 2.73 F
3684 4792 2.029288 CATGAGCGCACGAGTTGGT 61.029 57.895 11.47 0.0 0.00 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1823 2901 0.555769 TTCCAACTTGGGGAGCTTGT 59.444 50.000 8.01 0.00 38.32 3.16 R
2176 3261 2.307768 CGCAGGTATACTCCCAGAGAA 58.692 52.381 2.25 0.00 33.32 2.87 R
2586 3673 4.451629 TCCTGATAGAACAAGTCGGTTC 57.548 45.455 0.00 0.00 45.87 3.62 R
3414 4522 2.290641 GTGGTTGACGCTTGAACAAGAT 59.709 45.455 17.19 5.31 40.79 2.40 R
4051 5159 1.202710 TGTTGTCCGTTGTGTAGCCAT 60.203 47.619 0.00 0.00 0.00 4.40 R
5051 6164 0.031314 GGATTCATGCGAGAGAGCGA 59.969 55.000 0.00 0.00 40.67 4.93 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 2.996444 GCCTTTGCTTTGCTTTGCT 58.004 47.368 0.00 0.00 33.53 3.91
28 29 1.302366 GCCTTTGCTTTGCTTTGCTT 58.698 45.000 0.00 0.00 33.53 3.91
29 30 1.672363 GCCTTTGCTTTGCTTTGCTTT 59.328 42.857 0.00 0.00 33.53 3.51
31 32 2.540157 CCTTTGCTTTGCTTTGCTTTGC 60.540 45.455 0.00 0.00 0.00 3.68
32 33 2.027003 TTGCTTTGCTTTGCTTTGCT 57.973 40.000 0.00 0.00 0.00 3.91
34 35 0.584876 GCTTTGCTTTGCTTTGCTGG 59.415 50.000 0.00 0.00 0.00 4.85
36 37 1.862827 CTTTGCTTTGCTTTGCTGGTC 59.137 47.619 0.00 0.00 0.00 4.02
37 38 0.248990 TTGCTTTGCTTTGCTGGTCG 60.249 50.000 0.00 0.00 0.00 4.79
38 39 1.360192 GCTTTGCTTTGCTGGTCGT 59.640 52.632 0.00 0.00 0.00 4.34
39 40 0.591170 GCTTTGCTTTGCTGGTCGTA 59.409 50.000 0.00 0.00 0.00 3.43
40 41 1.001815 GCTTTGCTTTGCTGGTCGTAA 60.002 47.619 0.00 0.00 0.00 3.18
43 44 2.177394 TGCTTTGCTGGTCGTAATGA 57.823 45.000 0.00 0.00 0.00 2.57
44 45 2.710377 TGCTTTGCTGGTCGTAATGAT 58.290 42.857 0.00 0.00 0.00 2.45
45 46 3.867857 TGCTTTGCTGGTCGTAATGATA 58.132 40.909 0.00 0.00 0.00 2.15
47 48 3.871594 GCTTTGCTGGTCGTAATGATAGT 59.128 43.478 0.00 0.00 0.00 2.12
48 49 5.047847 GCTTTGCTGGTCGTAATGATAGTA 58.952 41.667 0.00 0.00 0.00 1.82
50 51 6.128795 GCTTTGCTGGTCGTAATGATAGTATC 60.129 42.308 2.97 2.97 0.00 2.24
51 52 6.399639 TTGCTGGTCGTAATGATAGTATCA 57.600 37.500 15.10 15.10 44.55 2.15
77 78 7.203218 TGACTAGTATCATGCATGTCAACTAC 58.797 38.462 25.43 17.91 31.30 2.73
78 79 7.112452 ACTAGTATCATGCATGTCAACTACA 57.888 36.000 25.43 12.03 43.86 2.74
89 90 7.880105 TGCATGTCAACTACACAATTTTGATA 58.120 30.769 0.00 0.00 42.09 2.15
122 123 9.822185 CATAAAATTAAATGAAGAAAGAGGGGG 57.178 33.333 0.00 0.00 0.00 5.40
123 124 7.872061 AAAATTAAATGAAGAAAGAGGGGGT 57.128 32.000 0.00 0.00 0.00 4.95
124 125 7.872061 AAATTAAATGAAGAAAGAGGGGGTT 57.128 32.000 0.00 0.00 0.00 4.11
125 126 6.857437 ATTAAATGAAGAAAGAGGGGGTTG 57.143 37.500 0.00 0.00 0.00 3.77
126 127 4.469469 AAATGAAGAAAGAGGGGGTTGA 57.531 40.909 0.00 0.00 0.00 3.18
127 128 3.728385 ATGAAGAAAGAGGGGGTTGAG 57.272 47.619 0.00 0.00 0.00 3.02
128 129 2.418669 TGAAGAAAGAGGGGGTTGAGT 58.581 47.619 0.00 0.00 0.00 3.41
130 131 4.175962 TGAAGAAAGAGGGGGTTGAGTAT 58.824 43.478 0.00 0.00 0.00 2.12
150 151 9.425248 TGAGTATCATATCATGCTACCATATCA 57.575 33.333 0.00 0.00 42.56 2.15
161 162 9.910267 TCATGCTACCATATCATAATAAATGCT 57.090 29.630 0.00 0.00 0.00 3.79
180 181 7.606858 AATGCTATGATACTATGTGTCATGC 57.393 36.000 16.45 16.40 42.62 4.06
181 182 6.100404 TGCTATGATACTATGTGTCATGCA 57.900 37.500 16.45 18.03 42.62 3.96
182 183 6.704310 TGCTATGATACTATGTGTCATGCAT 58.296 36.000 16.45 0.00 42.62 3.96
185 186 8.598924 GCTATGATACTATGTGTCATGCATAAC 58.401 37.037 16.45 0.00 42.62 1.89
186 187 9.643693 CTATGATACTATGTGTCATGCATAACA 57.356 33.333 16.45 0.00 42.62 2.41
187 188 8.907222 ATGATACTATGTGTCATGCATAACAA 57.093 30.769 3.65 0.00 41.50 2.83
188 189 8.907222 TGATACTATGTGTCATGCATAACAAT 57.093 30.769 3.65 3.86 29.19 2.71
189 190 9.995003 TGATACTATGTGTCATGCATAACAATA 57.005 29.630 3.65 4.78 29.19 1.90
238 239 3.942829 TCATACTATGCATTAGGCTGGC 58.057 45.455 3.54 0.00 45.15 4.85
239 240 2.859165 TACTATGCATTAGGCTGGCC 57.141 50.000 3.54 3.00 45.15 5.36
240 241 0.846015 ACTATGCATTAGGCTGGCCA 59.154 50.000 14.39 4.71 45.15 5.36
241 242 1.426598 ACTATGCATTAGGCTGGCCAT 59.573 47.619 5.51 0.00 45.15 4.40
244 245 0.846015 TGCATTAGGCTGGCCATAGT 59.154 50.000 5.51 0.00 45.15 2.12
245 246 1.242076 GCATTAGGCTGGCCATAGTG 58.758 55.000 5.51 4.27 40.25 2.74
246 247 1.901591 CATTAGGCTGGCCATAGTGG 58.098 55.000 5.51 0.00 41.55 4.00
247 248 0.773644 ATTAGGCTGGCCATAGTGGG 59.226 55.000 5.51 0.00 38.19 4.61
250 251 3.420482 GCTGGCCATAGTGGGGGT 61.420 66.667 5.51 0.00 38.19 4.95
251 252 2.076184 GCTGGCCATAGTGGGGGTA 61.076 63.158 5.51 0.00 38.19 3.69
252 253 1.641552 GCTGGCCATAGTGGGGGTAA 61.642 60.000 5.51 0.00 38.19 2.85
253 254 0.182775 CTGGCCATAGTGGGGGTAAC 59.817 60.000 5.51 0.00 38.19 2.50
254 255 0.550393 TGGCCATAGTGGGGGTAACA 60.550 55.000 0.00 0.00 38.19 2.41
255 256 0.850784 GGCCATAGTGGGGGTAACAT 59.149 55.000 0.00 0.00 38.19 2.71
256 257 2.059490 GGCCATAGTGGGGGTAACATA 58.941 52.381 0.00 0.00 38.19 2.29
258 259 3.483421 GCCATAGTGGGGGTAACATAAC 58.517 50.000 0.00 0.00 38.19 1.89
260 261 4.348754 GCCATAGTGGGGGTAACATAACTA 59.651 45.833 0.00 0.00 38.19 2.24
261 262 5.512576 GCCATAGTGGGGGTAACATAACTAG 60.513 48.000 0.00 0.00 38.19 2.57
263 264 6.783977 CCATAGTGGGGGTAACATAACTAGTA 59.216 42.308 0.00 0.00 39.74 1.82
266 267 6.446451 AGTGGGGGTAACATAACTAGTATCA 58.554 40.000 0.00 0.00 39.74 2.15
267 268 7.080353 AGTGGGGGTAACATAACTAGTATCAT 58.920 38.462 0.00 0.00 39.74 2.45
268 269 8.236643 AGTGGGGGTAACATAACTAGTATCATA 58.763 37.037 0.00 0.00 39.74 2.15
269 270 9.043548 GTGGGGGTAACATAACTAGTATCATAT 57.956 37.037 0.00 0.00 39.74 1.78
281 282 7.925043 ACTAGTATCATATACTTGGGACTCG 57.075 40.000 4.99 0.00 0.00 4.18
282 283 5.646577 AGTATCATATACTTGGGACTCGC 57.353 43.478 0.00 0.00 0.00 5.03
283 284 5.077564 AGTATCATATACTTGGGACTCGCA 58.922 41.667 0.00 0.00 0.00 5.10
285 286 4.746535 TCATATACTTGGGACTCGCAAA 57.253 40.909 9.59 0.00 35.96 3.68
286 287 4.439057 TCATATACTTGGGACTCGCAAAC 58.561 43.478 9.59 0.00 35.96 2.93
287 288 2.851263 ATACTTGGGACTCGCAAACA 57.149 45.000 9.59 1.72 35.96 2.83
288 289 2.851263 TACTTGGGACTCGCAAACAT 57.149 45.000 9.59 2.18 35.96 2.71
289 290 1.238439 ACTTGGGACTCGCAAACATG 58.762 50.000 9.59 0.00 35.96 3.21
290 291 0.109597 CTTGGGACTCGCAAACATGC 60.110 55.000 9.59 0.00 35.96 4.06
293 294 1.271108 TGGGACTCGCAAACATGCTTA 60.271 47.619 0.00 0.00 0.00 3.09
294 295 1.130561 GGGACTCGCAAACATGCTTAC 59.869 52.381 0.00 0.00 0.00 2.34
295 296 1.201921 GGACTCGCAAACATGCTTACG 60.202 52.381 0.00 0.00 0.00 3.18
299 300 1.065031 CGCAAACATGCTTACGTGGC 61.065 55.000 0.00 3.00 37.10 5.01
301 302 1.967762 CAAACATGCTTACGTGGCAG 58.032 50.000 19.47 14.54 43.15 4.85
306 307 2.819608 ACATGCTTACGTGGCAGAAAAT 59.180 40.909 19.47 4.06 43.15 1.82
307 308 3.255642 ACATGCTTACGTGGCAGAAAATT 59.744 39.130 19.47 3.47 43.15 1.82
309 310 5.048364 ACATGCTTACGTGGCAGAAAATTAA 60.048 36.000 19.47 0.00 43.15 1.40
310 311 5.440234 TGCTTACGTGGCAGAAAATTAAA 57.560 34.783 12.76 0.00 34.56 1.52
311 312 5.457140 TGCTTACGTGGCAGAAAATTAAAG 58.543 37.500 12.76 0.00 34.56 1.85
312 313 5.239744 TGCTTACGTGGCAGAAAATTAAAGA 59.760 36.000 12.76 0.00 34.56 2.52
313 314 6.146898 GCTTACGTGGCAGAAAATTAAAGAA 58.853 36.000 0.00 0.00 0.00 2.52
314 315 6.305638 GCTTACGTGGCAGAAAATTAAAGAAG 59.694 38.462 0.00 0.00 0.00 2.85
315 316 7.499321 TTACGTGGCAGAAAATTAAAGAAGA 57.501 32.000 0.00 0.00 0.00 2.87
316 317 6.002062 ACGTGGCAGAAAATTAAAGAAGAG 57.998 37.500 0.00 0.00 0.00 2.85
317 318 5.763204 ACGTGGCAGAAAATTAAAGAAGAGA 59.237 36.000 0.00 0.00 0.00 3.10
318 319 6.073003 ACGTGGCAGAAAATTAAAGAAGAGAG 60.073 38.462 0.00 0.00 0.00 3.20
319 320 6.147821 CGTGGCAGAAAATTAAAGAAGAGAGA 59.852 38.462 0.00 0.00 0.00 3.10
322 323 7.605691 TGGCAGAAAATTAAAGAAGAGAGAGAG 59.394 37.037 0.00 0.00 0.00 3.20
323 324 7.065683 GGCAGAAAATTAAAGAAGAGAGAGAGG 59.934 40.741 0.00 0.00 0.00 3.69
326 327 8.318412 AGAAAATTAAAGAAGAGAGAGAGGGTC 58.682 37.037 0.00 0.00 0.00 4.46
327 328 7.560796 AAATTAAAGAAGAGAGAGAGGGTCA 57.439 36.000 0.00 0.00 0.00 4.02
329 330 8.846423 AATTAAAGAAGAGAGAGAGGGTCATA 57.154 34.615 0.00 0.00 0.00 2.15
330 331 7.889873 TTAAAGAAGAGAGAGAGGGTCATAG 57.110 40.000 0.00 0.00 0.00 2.23
332 333 6.584471 AAGAAGAGAGAGAGGGTCATAGTA 57.416 41.667 0.00 0.00 0.00 1.82
334 335 6.362248 AGAAGAGAGAGAGGGTCATAGTAAC 58.638 44.000 0.00 0.00 0.00 2.50
335 336 5.718801 AGAGAGAGAGGGTCATAGTAACA 57.281 43.478 0.00 0.00 0.00 2.41
336 337 6.274322 AGAGAGAGAGGGTCATAGTAACAT 57.726 41.667 0.00 0.00 0.00 2.71
337 338 7.395525 AGAGAGAGAGGGTCATAGTAACATA 57.604 40.000 0.00 0.00 0.00 2.29
338 339 7.458397 AGAGAGAGAGGGTCATAGTAACATAG 58.542 42.308 0.00 0.00 0.00 2.23
339 340 6.548321 AGAGAGAGGGTCATAGTAACATAGG 58.452 44.000 0.00 0.00 0.00 2.57
340 341 6.103501 AGAGAGAGGGTCATAGTAACATAGGT 59.896 42.308 0.00 0.00 0.00 3.08
341 342 7.295196 AGAGAGAGGGTCATAGTAACATAGGTA 59.705 40.741 0.00 0.00 0.00 3.08
343 344 7.295196 AGAGAGGGTCATAGTAACATAGGTAGA 59.705 40.741 0.00 0.00 0.00 2.59
345 346 9.125255 AGAGGGTCATAGTAACATAGGTAGATA 57.875 37.037 0.00 0.00 0.00 1.98
346 347 9.176460 GAGGGTCATAGTAACATAGGTAGATAC 57.824 40.741 0.00 0.00 0.00 2.24
347 348 8.114743 AGGGTCATAGTAACATAGGTAGATACC 58.885 40.741 0.43 0.43 46.82 2.73
383 384 6.791887 ATGTTATGCTACTATGTGTCATGC 57.208 37.500 0.00 0.00 0.00 4.06
386 387 6.203338 TGTTATGCTACTATGTGTCATGCATG 59.797 38.462 21.07 21.07 39.07 4.06
387 388 3.469739 TGCTACTATGTGTCATGCATGG 58.530 45.455 25.97 10.76 0.00 3.66
390 391 2.725637 ACTATGTGTCATGCATGGCAA 58.274 42.857 34.01 23.37 44.94 4.52
391 392 3.293337 ACTATGTGTCATGCATGGCAAT 58.707 40.909 34.01 27.34 44.94 3.56
392 393 4.463070 ACTATGTGTCATGCATGGCAATA 58.537 39.130 34.01 27.05 44.94 1.90
394 395 4.739587 ATGTGTCATGCATGGCAATAAA 57.260 36.364 34.01 20.14 44.94 1.40
396 397 5.848833 TGTGTCATGCATGGCAATAAATA 57.151 34.783 34.01 14.13 44.94 1.40
397 398 6.218108 TGTGTCATGCATGGCAATAAATAA 57.782 33.333 34.01 7.61 44.94 1.40
398 399 6.274579 TGTGTCATGCATGGCAATAAATAAG 58.725 36.000 34.01 0.13 44.94 1.73
399 400 6.096564 TGTGTCATGCATGGCAATAAATAAGA 59.903 34.615 34.01 6.14 44.94 2.10
400 401 6.418819 GTGTCATGCATGGCAATAAATAAGAC 59.581 38.462 34.01 14.70 44.94 3.01
401 402 5.922544 GTCATGCATGGCAATAAATAAGACC 59.077 40.000 26.04 0.00 43.62 3.85
402 403 5.597594 TCATGCATGGCAATAAATAAGACCA 59.402 36.000 25.97 0.00 43.62 4.02
403 404 6.268158 TCATGCATGGCAATAAATAAGACCAT 59.732 34.615 25.97 0.00 43.62 3.55
404 405 6.088016 TGCATGGCAATAAATAAGACCATC 57.912 37.500 0.00 0.00 35.76 3.51
405 406 5.834742 TGCATGGCAATAAATAAGACCATCT 59.165 36.000 0.00 0.00 35.76 2.90
406 407 7.003482 TGCATGGCAATAAATAAGACCATCTA 58.997 34.615 0.00 0.00 35.76 1.98
407 408 7.670979 TGCATGGCAATAAATAAGACCATCTAT 59.329 33.333 0.00 0.00 35.76 1.98
408 409 7.972277 GCATGGCAATAAATAAGACCATCTATG 59.028 37.037 0.00 0.00 35.76 2.23
409 410 9.234827 CATGGCAATAAATAAGACCATCTATGA 57.765 33.333 0.00 0.00 35.76 2.15
410 411 9.986157 ATGGCAATAAATAAGACCATCTATGAT 57.014 29.630 0.00 0.00 32.49 2.45
452 453 8.783833 ACTTTATCATACTATGCATTAGGCTG 57.216 34.615 3.54 3.31 45.15 4.85
454 455 3.942829 TCATACTATGCATTAGGCTGCC 58.057 45.455 11.65 11.65 45.15 4.85
456 457 0.250467 ACTATGCATTAGGCTGCCCG 60.250 55.000 16.57 2.67 45.15 6.13
457 458 0.250467 CTATGCATTAGGCTGCCCGT 60.250 55.000 16.57 3.33 45.15 5.28
460 461 0.182537 TGCATTAGGCTGCCCGTAAT 59.817 50.000 16.57 11.04 45.15 1.89
461 462 0.593128 GCATTAGGCTGCCCGTAATG 59.407 55.000 25.15 25.15 40.25 1.90
462 463 1.238439 CATTAGGCTGCCCGTAATGG 58.762 55.000 23.19 11.43 33.39 3.16
465 466 0.468226 TAGGCTGCCCGTAATGGAAG 59.532 55.000 16.57 0.00 42.00 3.46
466 467 1.077716 GGCTGCCCGTAATGGAAGT 60.078 57.895 7.66 0.00 42.00 3.01
467 468 0.179468 GGCTGCCCGTAATGGAAGTA 59.821 55.000 7.66 0.00 42.00 2.24
468 469 1.202770 GGCTGCCCGTAATGGAAGTAT 60.203 52.381 7.66 0.00 42.00 2.12
469 470 2.143925 GCTGCCCGTAATGGAAGTATC 58.856 52.381 0.00 0.00 42.00 2.24
470 471 2.484770 GCTGCCCGTAATGGAAGTATCA 60.485 50.000 0.00 0.00 42.00 2.15
471 472 3.807209 GCTGCCCGTAATGGAAGTATCAT 60.807 47.826 0.00 0.00 42.00 2.45
474 475 4.020573 TGCCCGTAATGGAAGTATCATAGG 60.021 45.833 0.00 0.00 42.00 2.57
475 476 4.020485 GCCCGTAATGGAAGTATCATAGGT 60.020 45.833 0.00 0.00 42.00 3.08
477 478 6.627508 GCCCGTAATGGAAGTATCATAGGTAG 60.628 46.154 0.00 0.00 42.00 3.18
478 479 6.436532 CCCGTAATGGAAGTATCATAGGTAGT 59.563 42.308 0.00 0.00 42.00 2.73
479 480 7.613022 CCCGTAATGGAAGTATCATAGGTAGTA 59.387 40.741 0.00 0.00 42.00 1.82
486 487 7.673926 TGGAAGTATCATAGGTAGTATCATGCA 59.326 37.037 0.00 0.00 0.00 3.96
487 488 8.700051 GGAAGTATCATAGGTAGTATCATGCAT 58.300 37.037 0.00 0.00 0.00 3.96
488 489 9.526713 GAAGTATCATAGGTAGTATCATGCATG 57.473 37.037 21.07 21.07 0.00 4.06
489 490 7.495901 AGTATCATAGGTAGTATCATGCATGC 58.504 38.462 22.25 11.82 0.00 4.06
490 491 5.089970 TCATAGGTAGTATCATGCATGCC 57.910 43.478 22.25 15.40 0.00 4.40
492 493 3.862877 AGGTAGTATCATGCATGCCAA 57.137 42.857 22.25 5.34 0.00 4.52
493 494 3.480470 AGGTAGTATCATGCATGCCAAC 58.520 45.455 22.25 17.59 0.00 3.77
495 496 4.347876 AGGTAGTATCATGCATGCCAACTA 59.652 41.667 22.25 21.88 0.00 2.24
496 497 5.063204 GGTAGTATCATGCATGCCAACTAA 58.937 41.667 24.68 9.84 0.00 2.24
497 498 5.180117 GGTAGTATCATGCATGCCAACTAAG 59.820 44.000 24.68 3.62 0.00 2.18
499 500 1.836802 TCATGCATGCCAACTAAGCA 58.163 45.000 22.25 0.00 45.94 3.91
500 501 2.169330 TCATGCATGCCAACTAAGCAA 58.831 42.857 22.25 0.00 44.83 3.91
501 502 2.761767 TCATGCATGCCAACTAAGCAAT 59.238 40.909 22.25 0.00 44.83 3.56
503 504 3.681593 TGCATGCCAACTAAGCAATTT 57.318 38.095 16.68 0.00 44.83 1.82
504 505 4.005487 TGCATGCCAACTAAGCAATTTT 57.995 36.364 16.68 0.00 44.83 1.82
506 507 3.995705 GCATGCCAACTAAGCAATTTTGA 59.004 39.130 6.36 0.00 44.83 2.69
507 508 4.632688 GCATGCCAACTAAGCAATTTTGAT 59.367 37.500 6.36 0.00 44.83 2.57
508 509 5.446741 GCATGCCAACTAAGCAATTTTGATG 60.447 40.000 6.36 0.00 44.83 3.07
509 510 5.465532 TGCCAACTAAGCAATTTTGATGA 57.534 34.783 0.00 0.00 37.28 2.92
511 512 5.927689 TGCCAACTAAGCAATTTTGATGAAG 59.072 36.000 0.00 0.00 37.28 3.02
512 513 5.928264 GCCAACTAAGCAATTTTGATGAAGT 59.072 36.000 0.00 0.00 0.00 3.01
514 515 6.366877 CCAACTAAGCAATTTTGATGAAGTGG 59.633 38.462 0.00 0.00 0.00 4.00
515 516 5.473039 ACTAAGCAATTTTGATGAAGTGGC 58.527 37.500 0.00 0.00 0.00 5.01
516 517 4.339872 AAGCAATTTTGATGAAGTGGCA 57.660 36.364 0.00 0.00 0.00 4.92
517 518 4.546829 AGCAATTTTGATGAAGTGGCAT 57.453 36.364 0.00 0.00 0.00 4.40
518 519 5.664294 AGCAATTTTGATGAAGTGGCATA 57.336 34.783 0.00 0.00 0.00 3.14
519 520 5.657474 AGCAATTTTGATGAAGTGGCATAG 58.343 37.500 0.00 0.00 0.00 2.23
520 521 5.419788 AGCAATTTTGATGAAGTGGCATAGA 59.580 36.000 0.00 0.00 0.00 1.98
522 523 6.759827 GCAATTTTGATGAAGTGGCATAGAAT 59.240 34.615 0.00 0.00 0.00 2.40
523 524 7.279313 GCAATTTTGATGAAGTGGCATAGAATT 59.721 33.333 0.00 0.00 0.00 2.17
524 525 9.806203 CAATTTTGATGAAGTGGCATAGAATTA 57.194 29.630 0.00 0.00 0.00 1.40
528 529 9.806203 TTTGATGAAGTGGCATAGAATTAAATG 57.194 29.630 0.00 0.00 0.00 2.32
530 531 9.187996 TGATGAAGTGGCATAGAATTAAATGAA 57.812 29.630 0.00 0.00 0.00 2.57
531 532 9.674824 GATGAAGTGGCATAGAATTAAATGAAG 57.325 33.333 0.00 0.00 0.00 3.02
532 533 8.806429 TGAAGTGGCATAGAATTAAATGAAGA 57.194 30.769 0.00 0.00 0.00 2.87
533 534 9.241919 TGAAGTGGCATAGAATTAAATGAAGAA 57.758 29.630 0.00 0.00 0.00 2.52
536 537 9.466497 AGTGGCATAGAATTAAATGAAGAAAGA 57.534 29.630 0.00 0.00 0.00 2.52
537 538 9.727627 GTGGCATAGAATTAAATGAAGAAAGAG 57.272 33.333 0.00 0.00 0.00 2.85
538 539 9.685276 TGGCATAGAATTAAATGAAGAAAGAGA 57.315 29.630 4.14 0.00 0.00 3.10
550 551 9.651913 AAATGAAGAAAGAGAGACTTGAGTATC 57.348 33.333 0.00 0.00 38.98 2.24
585 586 9.890629 ATACCGTATCATATTAAATGATGTGCT 57.109 29.630 16.73 5.80 38.98 4.40
588 589 9.371136 CCGTATCATATTAAATGATGTGCTACT 57.629 33.333 16.73 0.65 38.98 2.57
597 598 6.579666 AAATGATGTGCTACTTTGTGTCAT 57.420 33.333 0.00 0.00 0.00 3.06
598 599 5.556355 ATGATGTGCTACTTTGTGTCATG 57.444 39.130 0.00 0.00 0.00 3.07
601 602 3.148412 TGTGCTACTTTGTGTCATGCAT 58.852 40.909 0.00 0.00 34.18 3.96
602 603 3.058085 TGTGCTACTTTGTGTCATGCATG 60.058 43.478 21.07 21.07 34.18 4.06
603 604 2.488937 TGCTACTTTGTGTCATGCATGG 59.511 45.455 25.97 10.76 0.00 3.66
604 605 2.733227 GCTACTTTGTGTCATGCATGGC 60.733 50.000 24.40 24.40 0.00 4.40
605 606 1.330234 ACTTTGTGTCATGCATGGCA 58.670 45.000 29.45 29.45 44.86 4.92
607 608 2.300723 ACTTTGTGTCATGCATGGCAAT 59.699 40.909 34.01 15.19 44.94 3.56
609 610 4.021280 ACTTTGTGTCATGCATGGCAATAA 60.021 37.500 34.01 26.82 44.94 1.40
611 612 4.739587 TGTGTCATGCATGGCAATAAAT 57.260 36.364 34.01 0.00 44.94 1.40
613 614 6.408107 TGTGTCATGCATGGCAATAAATAT 57.592 33.333 34.01 0.00 44.94 1.28
615 616 7.595604 TGTGTCATGCATGGCAATAAATATAG 58.404 34.615 34.01 0.00 44.94 1.31
616 617 7.231115 TGTGTCATGCATGGCAATAAATATAGT 59.769 33.333 34.01 0.00 44.94 2.12
618 619 7.094248 TGTCATGCATGGCAATAAATATAGTCC 60.094 37.037 30.82 0.00 43.62 3.85
620 621 7.337689 TCATGCATGGCAATAAATATAGTCCTC 59.662 37.037 25.97 0.00 43.62 3.71
624 625 8.834465 GCATGGCAATAAATATAGTCCTCTATG 58.166 37.037 0.00 0.00 37.44 2.23
639 640 8.907829 AGTCCTCTATGATACCAACATATGAT 57.092 34.615 10.38 0.00 31.26 2.45
640 641 9.997172 AGTCCTCTATGATACCAACATATGATA 57.003 33.333 10.38 0.00 31.26 2.15
654 655 9.617523 CCAACATATGATACTATGCATTATGGA 57.382 33.333 10.38 0.00 33.26 3.41
706 707 9.355916 TGCATGATACTAGTATATGATACTCCC 57.644 37.037 22.89 9.00 0.00 4.30
707 708 8.798402 GCATGATACTAGTATATGATACTCCCC 58.202 40.741 22.89 8.64 0.00 4.81
716 717 8.147244 AGTATATGATACTCCCCATTACAACC 57.853 38.462 0.00 0.00 0.00 3.77
717 718 7.737607 AGTATATGATACTCCCCATTACAACCA 59.262 37.037 0.00 0.00 0.00 3.67
718 719 4.771114 TGATACTCCCCATTACAACCAG 57.229 45.455 0.00 0.00 0.00 4.00
719 720 3.118038 TGATACTCCCCATTACAACCAGC 60.118 47.826 0.00 0.00 0.00 4.85
720 721 0.331616 ACTCCCCATTACAACCAGCC 59.668 55.000 0.00 0.00 0.00 4.85
723 724 2.241176 CTCCCCATTACAACCAGCCTTA 59.759 50.000 0.00 0.00 0.00 2.69
724 725 2.241176 TCCCCATTACAACCAGCCTTAG 59.759 50.000 0.00 0.00 0.00 2.18
725 726 2.654863 CCCATTACAACCAGCCTTAGG 58.345 52.381 0.00 0.00 0.00 2.69
726 727 2.241176 CCCATTACAACCAGCCTTAGGA 59.759 50.000 0.69 0.00 0.00 2.94
727 728 3.308832 CCCATTACAACCAGCCTTAGGAA 60.309 47.826 0.69 0.00 0.00 3.36
728 729 3.947834 CCATTACAACCAGCCTTAGGAAG 59.052 47.826 0.69 0.00 0.00 3.46
790 791 9.601810 AGTATATGATACTCCTCATTACAACCA 57.398 33.333 0.00 0.00 37.13 3.67
791 792 9.862371 GTATATGATACTCCTCATTACAACCAG 57.138 37.037 0.00 0.00 37.13 4.00
846 1073 2.430465 GAGATTTTGAGAGCTGTGCCA 58.570 47.619 0.00 0.00 0.00 4.92
898 1138 2.857483 CAACACCCACATGACCAACTA 58.143 47.619 0.00 0.00 0.00 2.24
938 1186 7.686438 ATATATGGAATACGCAAATGCTTCA 57.314 32.000 3.63 0.00 39.32 3.02
954 1202 3.130633 GCTTCATCCAAACCAAACCAAC 58.869 45.455 0.00 0.00 0.00 3.77
961 1209 1.999024 CAAACCAAACCAACAGCACAC 59.001 47.619 0.00 0.00 0.00 3.82
1272 1534 1.377725 CCTGCGGATGCTCAACCTT 60.378 57.895 0.00 0.00 43.34 3.50
1581 2659 6.592607 TCGAACTCACTTATAACCATTTCACC 59.407 38.462 0.00 0.00 0.00 4.02
1766 2844 3.478857 TTACAACTGGTCGTCATTGGT 57.521 42.857 0.00 0.00 0.00 3.67
1856 2934 1.047596 TTGGAAAGGCTTGGCTTGCA 61.048 50.000 15.42 0.00 0.00 4.08
2089 3174 3.568538 CAACTGCAGAAATTGGCACTAC 58.431 45.455 23.35 0.00 35.86 2.73
2176 3261 6.938596 GTGGTTAAACTTACAGGACAATAGGT 59.061 38.462 0.00 0.00 0.00 3.08
2586 3673 7.026631 TGAAGTTGGTAGTTTGTCAAATCTG 57.973 36.000 0.40 0.00 0.00 2.90
3157 4265 4.712476 ACCAAGCCAGAAGATATTAGCAG 58.288 43.478 0.00 0.00 0.00 4.24
3414 4522 7.277760 CACCGTTGTCTCATTAAGATCATTACA 59.722 37.037 0.00 0.00 36.11 2.41
3684 4792 2.029288 CATGAGCGCACGAGTTGGT 61.029 57.895 11.47 0.00 0.00 3.67
3747 4855 5.132648 TGAGGGGATGCAAACTTCATATAGT 59.867 40.000 0.00 0.00 0.00 2.12
3849 4957 2.297033 CCAATATGGCATGCTAACCACC 59.703 50.000 18.92 0.00 39.19 4.61
4051 5159 4.037222 TGGAGATAGCTGACCCAACAATA 58.963 43.478 0.00 0.00 0.00 1.90
4344 5453 6.586082 ACTTCAGTTTGTGTTTGTTTGTCATC 59.414 34.615 0.00 0.00 0.00 2.92
4373 5484 7.102346 CCCATTTTATTTGCAACAATGAGGTA 58.898 34.615 16.16 0.00 0.00 3.08
4420 5531 9.519191 TGGAGAGATTTCTTATTGTTTGAATCA 57.481 29.630 0.00 0.00 32.53 2.57
4472 5583 3.809832 GGTATGCACCTAGTGTTAGCATG 59.190 47.826 8.32 0.00 44.75 4.06
4484 5595 3.674753 GTGTTAGCATGTTGTTTGCATCC 59.325 43.478 0.00 0.00 42.62 3.51
4530 5641 2.858644 TGGGGATGATCAAACCCTAGT 58.141 47.619 28.37 0.64 43.72 2.57
4558 5669 8.096414 CCAAATGGAATTCAAATAGGTTCAACT 58.904 33.333 7.93 0.00 33.67 3.16
4559 5670 9.492973 CAAATGGAATTCAAATAGGTTCAACTT 57.507 29.630 7.93 0.00 33.67 2.66
4593 5704 1.327303 TCAGTGCACCCAAAATGTCC 58.673 50.000 14.63 0.00 0.00 4.02
4642 5755 3.056821 GGTGGAAACCTAAACCAGAATGC 60.057 47.826 0.00 0.00 34.21 3.56
4660 5773 3.712016 TGCTGCACATTTACCTAGGAA 57.288 42.857 17.98 0.00 0.00 3.36
4709 5822 4.405116 TGCATTTGAAATGGGGCTAATC 57.595 40.909 18.52 1.22 0.00 1.75
4742 5855 6.209391 CCAATAATCCTGAAAAGTTGTGAGGT 59.791 38.462 0.00 0.00 0.00 3.85
4842 5955 8.782144 TCAAAACAAACAGCAGAAAAGAAAAAT 58.218 25.926 0.00 0.00 0.00 1.82
4999 6112 3.458163 CCCCTAAGAGCGCCACGA 61.458 66.667 2.29 0.00 0.00 4.35
5037 6150 1.385631 AGCTCCTCCCCATGCTCAT 60.386 57.895 0.00 0.00 0.00 2.90
5038 6151 1.072852 GCTCCTCCCCATGCTCATC 59.927 63.158 0.00 0.00 0.00 2.92
5039 6152 1.759881 CTCCTCCCCATGCTCATCC 59.240 63.158 0.00 0.00 0.00 3.51
5040 6153 1.771746 TCCTCCCCATGCTCATCCC 60.772 63.158 0.00 0.00 0.00 3.85
5041 6154 2.838467 CCTCCCCATGCTCATCCCC 61.838 68.421 0.00 0.00 0.00 4.81
5042 6155 1.773391 CTCCCCATGCTCATCCCCT 60.773 63.158 0.00 0.00 0.00 4.79
5043 6156 1.771746 TCCCCATGCTCATCCCCTC 60.772 63.158 0.00 0.00 0.00 4.30
5044 6157 2.838467 CCCCATGCTCATCCCCTCC 61.838 68.421 0.00 0.00 0.00 4.30
5045 6158 1.773391 CCCATGCTCATCCCCTCCT 60.773 63.158 0.00 0.00 0.00 3.69
5046 6159 1.759881 CCATGCTCATCCCCTCCTC 59.240 63.158 0.00 0.00 0.00 3.71
5047 6160 0.767446 CCATGCTCATCCCCTCCTCT 60.767 60.000 0.00 0.00 0.00 3.69
5048 6161 0.397187 CATGCTCATCCCCTCCTCTG 59.603 60.000 0.00 0.00 0.00 3.35
5049 6162 0.767446 ATGCTCATCCCCTCCTCTGG 60.767 60.000 0.00 0.00 0.00 3.86
5050 6163 2.817056 GCTCATCCCCTCCTCTGGC 61.817 68.421 0.00 0.00 0.00 4.85
5051 6164 1.074623 CTCATCCCCTCCTCTGGCT 60.075 63.158 0.00 0.00 0.00 4.75
5052 6165 1.074926 TCATCCCCTCCTCTGGCTC 60.075 63.158 0.00 0.00 0.00 4.70
5053 6166 2.123077 ATCCCCTCCTCTGGCTCG 60.123 66.667 0.00 0.00 0.00 5.03
5056 6169 3.535962 CCCTCCTCTGGCTCGCTC 61.536 72.222 0.00 0.00 0.00 5.03
5057 6170 2.441901 CCTCCTCTGGCTCGCTCT 60.442 66.667 0.00 0.00 0.00 4.09
5058 6171 2.489275 CCTCCTCTGGCTCGCTCTC 61.489 68.421 0.00 0.00 0.00 3.20
5059 6172 1.453745 CTCCTCTGGCTCGCTCTCT 60.454 63.158 0.00 0.00 0.00 3.10
5060 6173 1.447317 CTCCTCTGGCTCGCTCTCTC 61.447 65.000 0.00 0.00 0.00 3.20
5061 6174 2.715005 CTCTGGCTCGCTCTCTCG 59.285 66.667 0.00 0.00 0.00 4.04
5062 6175 3.468266 CTCTGGCTCGCTCTCTCGC 62.468 68.421 0.00 0.00 0.00 5.03
5063 6176 3.819920 CTGGCTCGCTCTCTCGCA 61.820 66.667 0.00 0.00 0.00 5.10
5064 6177 3.136345 CTGGCTCGCTCTCTCGCAT 62.136 63.158 0.00 0.00 0.00 4.73
5065 6178 2.657944 GGCTCGCTCTCTCGCATG 60.658 66.667 0.00 0.00 0.00 4.06
5066 6179 2.410879 GCTCGCTCTCTCGCATGA 59.589 61.111 0.00 0.00 0.00 3.07
5067 6180 1.226802 GCTCGCTCTCTCGCATGAA 60.227 57.895 0.00 0.00 0.00 2.57
5068 6181 0.597118 GCTCGCTCTCTCGCATGAAT 60.597 55.000 0.00 0.00 0.00 2.57
5069 6182 1.407434 CTCGCTCTCTCGCATGAATC 58.593 55.000 0.00 0.00 0.00 2.52
5070 6183 0.031314 TCGCTCTCTCGCATGAATCC 59.969 55.000 0.00 0.00 0.00 3.01
5071 6184 1.274126 CGCTCTCTCGCATGAATCCG 61.274 60.000 0.00 0.00 0.00 4.18
5072 6185 0.031314 GCTCTCTCGCATGAATCCGA 59.969 55.000 0.00 0.00 0.00 4.55
5076 6189 1.930100 CTCGCATGAATCCGAGTGC 59.070 57.895 11.05 0.00 44.25 4.40
5077 6190 1.493950 CTCGCATGAATCCGAGTGCC 61.494 60.000 11.05 0.00 44.25 5.01
5078 6191 1.815003 CGCATGAATCCGAGTGCCA 60.815 57.895 0.00 0.00 34.20 4.92
5079 6192 1.723870 GCATGAATCCGAGTGCCAC 59.276 57.895 0.00 0.00 0.00 5.01
5080 6193 1.718757 GCATGAATCCGAGTGCCACC 61.719 60.000 0.00 0.00 0.00 4.61
5081 6194 0.392863 CATGAATCCGAGTGCCACCA 60.393 55.000 0.00 0.00 0.00 4.17
5082 6195 0.548031 ATGAATCCGAGTGCCACCAT 59.452 50.000 0.00 0.00 0.00 3.55
5083 6196 0.107703 TGAATCCGAGTGCCACCATC 60.108 55.000 0.00 0.00 0.00 3.51
5084 6197 1.153369 AATCCGAGTGCCACCATCG 60.153 57.895 0.00 0.00 36.24 3.84
5085 6198 3.740128 ATCCGAGTGCCACCATCGC 62.740 63.158 1.30 0.00 35.18 4.58
5101 6214 4.699522 GCCGCCCCTCGTTGTTCT 62.700 66.667 0.00 0.00 36.19 3.01
5102 6215 2.434359 CCGCCCCTCGTTGTTCTC 60.434 66.667 0.00 0.00 36.19 2.87
5103 6216 2.809601 CGCCCCTCGTTGTTCTCG 60.810 66.667 0.00 0.00 0.00 4.04
5104 6217 2.342648 GCCCCTCGTTGTTCTCGT 59.657 61.111 0.00 0.00 0.00 4.18
5105 6218 2.027625 GCCCCTCGTTGTTCTCGTG 61.028 63.158 0.00 0.00 0.00 4.35
5106 6219 1.374252 CCCCTCGTTGTTCTCGTGG 60.374 63.158 0.00 0.00 40.26 4.94
5107 6220 2.027625 CCCTCGTTGTTCTCGTGGC 61.028 63.158 0.00 0.00 39.57 5.01
5108 6221 2.027625 CCTCGTTGTTCTCGTGGCC 61.028 63.158 0.00 0.00 35.72 5.36
5109 6222 1.300620 CTCGTTGTTCTCGTGGCCA 60.301 57.895 0.00 0.00 0.00 5.36
5110 6223 1.557443 CTCGTTGTTCTCGTGGCCAC 61.557 60.000 26.78 26.78 0.00 5.01
5111 6224 2.604174 CGTTGTTCTCGTGGCCACC 61.604 63.158 29.95 15.85 0.00 4.61
5112 6225 1.525077 GTTGTTCTCGTGGCCACCA 60.525 57.895 29.95 17.50 0.00 4.17
5113 6226 0.889186 GTTGTTCTCGTGGCCACCAT 60.889 55.000 29.95 0.00 35.28 3.55
5114 6227 0.888736 TTGTTCTCGTGGCCACCATG 60.889 55.000 29.95 19.03 41.56 3.66
5115 6228 2.359850 TTCTCGTGGCCACCATGC 60.360 61.111 29.95 5.12 40.13 4.06
5116 6229 3.189376 TTCTCGTGGCCACCATGCA 62.189 57.895 29.95 7.93 40.13 3.96
5117 6230 3.434319 CTCGTGGCCACCATGCAC 61.434 66.667 29.95 3.46 40.13 4.57
5187 6302 9.088987 AGATTTGGTGGAATAGTTGTTGTATTT 57.911 29.630 0.00 0.00 0.00 1.40
5197 6312 8.409358 AATAGTTGTTGTATTTCTTGAGCCTT 57.591 30.769 0.00 0.00 0.00 4.35
5250 6365 1.308783 GGAGTACAAGGCAAGCCAGC 61.309 60.000 14.40 0.00 38.92 4.85
5267 6382 6.694445 AGCCAGCATATTTCCTAGTCTAAT 57.306 37.500 0.00 0.00 0.00 1.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 1.302366 AAGCAAAGCAAAGCAAAGGC 58.698 45.000 0.00 0.00 41.61 4.35
10 11 2.540157 GCAAAGCAAAGCAAAGCAAAGG 60.540 45.455 0.00 0.00 0.00 3.11
12 13 2.096174 CAGCAAAGCAAAGCAAAGCAAA 59.904 40.909 0.00 0.00 0.00 3.68
16 17 1.862827 GACCAGCAAAGCAAAGCAAAG 59.137 47.619 0.00 0.00 0.00 2.77
18 19 0.248990 CGACCAGCAAAGCAAAGCAA 60.249 50.000 0.00 0.00 0.00 3.91
21 22 3.058293 TCATTACGACCAGCAAAGCAAAG 60.058 43.478 0.00 0.00 0.00 2.77
22 23 2.881513 TCATTACGACCAGCAAAGCAAA 59.118 40.909 0.00 0.00 0.00 3.68
23 24 2.499197 TCATTACGACCAGCAAAGCAA 58.501 42.857 0.00 0.00 0.00 3.91
24 25 2.177394 TCATTACGACCAGCAAAGCA 57.823 45.000 0.00 0.00 0.00 3.91
25 26 3.871594 ACTATCATTACGACCAGCAAAGC 59.128 43.478 0.00 0.00 0.00 3.51
27 28 6.811954 TGATACTATCATTACGACCAGCAAA 58.188 36.000 0.00 0.00 33.59 3.68
28 29 6.399639 TGATACTATCATTACGACCAGCAA 57.600 37.500 0.00 0.00 33.59 3.91
51 52 6.824553 AGTTGACATGCATGATACTAGTCAT 58.175 36.000 32.75 6.24 39.34 3.06
52 53 6.225981 AGTTGACATGCATGATACTAGTCA 57.774 37.500 32.75 19.92 33.23 3.41
53 54 7.168302 GTGTAGTTGACATGCATGATACTAGTC 59.832 40.741 32.75 17.59 41.14 2.59
54 55 6.980978 GTGTAGTTGACATGCATGATACTAGT 59.019 38.462 32.75 21.04 41.14 2.57
55 56 6.980397 TGTGTAGTTGACATGCATGATACTAG 59.020 38.462 32.75 4.95 41.14 2.57
56 57 6.872920 TGTGTAGTTGACATGCATGATACTA 58.127 36.000 32.75 26.93 41.14 1.82
70 71 8.458573 ACACCTTATCAAAATTGTGTAGTTGA 57.541 30.769 0.00 0.00 35.36 3.18
119 120 5.171339 AGCATGATATGATACTCAACCCC 57.829 43.478 0.00 0.00 0.00 4.95
135 136 9.910267 AGCATTTATTATGATATGGTAGCATGA 57.090 29.630 17.58 1.89 35.30 3.07
154 155 9.154847 GCATGACACATAGTATCATAGCATTTA 57.845 33.333 0.00 0.00 31.83 1.40
155 156 7.662669 TGCATGACACATAGTATCATAGCATTT 59.337 33.333 0.00 0.00 34.71 2.32
156 157 7.163441 TGCATGACACATAGTATCATAGCATT 58.837 34.615 0.00 0.00 34.71 3.56
157 158 6.704310 TGCATGACACATAGTATCATAGCAT 58.296 36.000 0.00 0.00 34.71 3.79
158 159 6.100404 TGCATGACACATAGTATCATAGCA 57.900 37.500 0.00 9.68 35.97 3.49
159 160 8.598924 GTTATGCATGACACATAGTATCATAGC 58.401 37.037 16.16 0.00 31.83 2.97
160 161 9.643693 TGTTATGCATGACACATAGTATCATAG 57.356 33.333 19.43 0.00 31.83 2.23
161 162 9.995003 TTGTTATGCATGACACATAGTATCATA 57.005 29.630 22.61 2.27 31.83 2.15
162 163 8.907222 TTGTTATGCATGACACATAGTATCAT 57.093 30.769 22.61 0.00 31.90 2.45
163 164 8.907222 ATTGTTATGCATGACACATAGTATCA 57.093 30.769 22.61 6.55 31.90 2.15
212 213 8.099537 GCCAGCCTAATGCATAGTATGATATAT 58.900 37.037 14.52 0.00 44.83 0.86
213 214 7.445121 GCCAGCCTAATGCATAGTATGATATA 58.555 38.462 14.52 2.36 44.83 0.86
214 215 6.294473 GCCAGCCTAATGCATAGTATGATAT 58.706 40.000 14.52 4.62 44.83 1.63
215 216 5.396772 GGCCAGCCTAATGCATAGTATGATA 60.397 44.000 14.52 2.35 44.83 2.15
216 217 4.521146 GCCAGCCTAATGCATAGTATGAT 58.479 43.478 14.52 2.27 44.83 2.45
217 218 3.307691 GGCCAGCCTAATGCATAGTATGA 60.308 47.826 14.52 0.00 44.83 2.15
218 219 3.012518 GGCCAGCCTAATGCATAGTATG 58.987 50.000 0.00 5.73 44.83 2.39
219 220 2.644299 TGGCCAGCCTAATGCATAGTAT 59.356 45.455 0.00 0.00 44.83 2.12
220 221 2.054021 TGGCCAGCCTAATGCATAGTA 58.946 47.619 0.00 0.00 44.83 1.82
222 223 2.211250 ATGGCCAGCCTAATGCATAG 57.789 50.000 13.05 0.00 44.83 2.23
223 224 2.644299 ACTATGGCCAGCCTAATGCATA 59.356 45.455 13.05 0.00 44.83 3.14
225 226 0.846015 ACTATGGCCAGCCTAATGCA 59.154 50.000 13.05 0.00 44.83 3.96
226 227 1.242076 CACTATGGCCAGCCTAATGC 58.758 55.000 13.05 0.00 41.71 3.56
227 228 1.546323 CCCACTATGGCCAGCCTAATG 60.546 57.143 13.05 0.00 35.79 1.90
228 229 0.773644 CCCACTATGGCCAGCCTAAT 59.226 55.000 13.05 0.00 35.79 1.73
230 231 1.770110 CCCCACTATGGCCAGCCTA 60.770 63.158 13.05 0.00 35.79 3.93
231 232 3.099170 CCCCACTATGGCCAGCCT 61.099 66.667 13.05 0.00 35.79 4.58
233 234 1.641552 TTACCCCCACTATGGCCAGC 61.642 60.000 13.05 0.00 35.79 4.85
235 236 0.550393 TGTTACCCCCACTATGGCCA 60.550 55.000 8.56 8.56 35.79 5.36
236 237 0.850784 ATGTTACCCCCACTATGGCC 59.149 55.000 0.00 0.00 35.79 5.36
237 238 3.137728 AGTTATGTTACCCCCACTATGGC 59.862 47.826 0.00 0.00 35.79 4.40
238 239 5.605488 ACTAGTTATGTTACCCCCACTATGG 59.395 44.000 0.00 0.00 37.25 2.74
239 240 6.742559 ACTAGTTATGTTACCCCCACTATG 57.257 41.667 0.00 0.00 0.00 2.23
240 241 8.236643 TGATACTAGTTATGTTACCCCCACTAT 58.763 37.037 0.00 0.00 0.00 2.12
241 242 7.594570 TGATACTAGTTATGTTACCCCCACTA 58.405 38.462 0.00 0.00 0.00 2.74
255 256 9.445878 CGAGTCCCAAGTATATGATACTAGTTA 57.554 37.037 0.00 0.00 0.00 2.24
256 257 7.094291 GCGAGTCCCAAGTATATGATACTAGTT 60.094 40.741 0.00 0.00 0.00 2.24
258 259 6.374613 TGCGAGTCCCAAGTATATGATACTAG 59.625 42.308 0.00 0.00 0.00 2.57
260 261 5.077564 TGCGAGTCCCAAGTATATGATACT 58.922 41.667 0.00 0.00 0.00 2.12
261 262 5.386958 TGCGAGTCCCAAGTATATGATAC 57.613 43.478 0.00 0.00 0.00 2.24
263 264 4.955811 TTGCGAGTCCCAAGTATATGAT 57.044 40.909 0.00 0.00 0.00 2.45
266 267 4.481368 TGTTTGCGAGTCCCAAGTATAT 57.519 40.909 0.00 0.00 0.00 0.86
267 268 3.965379 TGTTTGCGAGTCCCAAGTATA 57.035 42.857 0.00 0.00 0.00 1.47
268 269 2.851263 TGTTTGCGAGTCCCAAGTAT 57.149 45.000 0.00 0.00 0.00 2.12
269 270 2.422597 CATGTTTGCGAGTCCCAAGTA 58.577 47.619 0.00 0.00 0.00 2.24
271 272 0.109597 GCATGTTTGCGAGTCCCAAG 60.110 55.000 0.00 0.00 39.49 3.61
272 273 1.956043 GCATGTTTGCGAGTCCCAA 59.044 52.632 0.00 0.00 39.49 4.12
282 283 1.535028 TCTGCCACGTAAGCATGTTTG 59.465 47.619 12.34 2.01 40.04 2.93
283 284 1.890876 TCTGCCACGTAAGCATGTTT 58.109 45.000 12.34 0.00 40.04 2.83
285 286 1.890876 TTTCTGCCACGTAAGCATGT 58.109 45.000 12.34 0.00 40.04 3.21
286 287 2.987413 TTTTCTGCCACGTAAGCATG 57.013 45.000 12.34 7.59 40.04 4.06
287 288 5.637006 TTAATTTTCTGCCACGTAAGCAT 57.363 34.783 12.34 0.60 40.04 3.79
288 289 5.239744 TCTTTAATTTTCTGCCACGTAAGCA 59.760 36.000 11.51 11.51 45.62 3.91
289 290 5.695818 TCTTTAATTTTCTGCCACGTAAGC 58.304 37.500 2.88 2.88 45.62 3.09
293 294 5.763204 TCTCTTCTTTAATTTTCTGCCACGT 59.237 36.000 0.00 0.00 0.00 4.49
294 295 6.147821 TCTCTCTTCTTTAATTTTCTGCCACG 59.852 38.462 0.00 0.00 0.00 4.94
295 296 7.389053 TCTCTCTCTTCTTTAATTTTCTGCCAC 59.611 37.037 0.00 0.00 0.00 5.01
299 300 8.100164 ACCCTCTCTCTCTTCTTTAATTTTCTG 58.900 37.037 0.00 0.00 0.00 3.02
301 302 8.097662 TGACCCTCTCTCTCTTCTTTAATTTTC 58.902 37.037 0.00 0.00 0.00 2.29
306 307 7.415086 ACTATGACCCTCTCTCTCTTCTTTAA 58.585 38.462 0.00 0.00 0.00 1.52
307 308 6.975949 ACTATGACCCTCTCTCTCTTCTTTA 58.024 40.000 0.00 0.00 0.00 1.85
309 310 5.466127 ACTATGACCCTCTCTCTCTTCTT 57.534 43.478 0.00 0.00 0.00 2.52
310 311 6.069323 TGTTACTATGACCCTCTCTCTCTTCT 60.069 42.308 0.00 0.00 0.00 2.85
311 312 6.123651 TGTTACTATGACCCTCTCTCTCTTC 58.876 44.000 0.00 0.00 0.00 2.87
312 313 6.080969 TGTTACTATGACCCTCTCTCTCTT 57.919 41.667 0.00 0.00 0.00 2.85
313 314 5.718801 TGTTACTATGACCCTCTCTCTCT 57.281 43.478 0.00 0.00 0.00 3.10
314 315 6.657541 CCTATGTTACTATGACCCTCTCTCTC 59.342 46.154 0.00 0.00 0.00 3.20
315 316 6.103501 ACCTATGTTACTATGACCCTCTCTCT 59.896 42.308 0.00 0.00 0.00 3.10
316 317 6.308566 ACCTATGTTACTATGACCCTCTCTC 58.691 44.000 0.00 0.00 0.00 3.20
317 318 6.282568 ACCTATGTTACTATGACCCTCTCT 57.717 41.667 0.00 0.00 0.00 3.10
318 319 7.460071 TCTACCTATGTTACTATGACCCTCTC 58.540 42.308 0.00 0.00 0.00 3.20
319 320 7.403837 TCTACCTATGTTACTATGACCCTCT 57.596 40.000 0.00 0.00 0.00 3.69
322 323 7.892241 TGGTATCTACCTATGTTACTATGACCC 59.108 40.741 7.84 0.00 46.58 4.46
323 324 8.874744 TGGTATCTACCTATGTTACTATGACC 57.125 38.462 7.84 0.00 46.58 4.02
357 358 8.773645 GCATGACACATAGTAGCATAACATTTA 58.226 33.333 0.00 0.00 0.00 1.40
359 360 6.767423 TGCATGACACATAGTAGCATAACATT 59.233 34.615 0.00 0.00 30.65 2.71
360 361 6.290605 TGCATGACACATAGTAGCATAACAT 58.709 36.000 0.00 0.00 30.65 2.71
362 363 6.347969 CCATGCATGACACATAGTAGCATAAC 60.348 42.308 28.31 0.00 39.67 1.89
363 364 5.702209 CCATGCATGACACATAGTAGCATAA 59.298 40.000 28.31 0.00 39.67 1.90
364 365 5.240121 CCATGCATGACACATAGTAGCATA 58.760 41.667 28.31 0.00 39.67 3.14
366 367 3.469739 CCATGCATGACACATAGTAGCA 58.530 45.455 28.31 0.00 37.13 3.49
369 370 3.557228 TGCCATGCATGACACATAGTA 57.443 42.857 28.31 5.91 31.71 1.82
370 371 2.423446 TGCCATGCATGACACATAGT 57.577 45.000 28.31 0.00 31.71 2.12
371 372 5.441709 TTATTGCCATGCATGACACATAG 57.558 39.130 28.31 10.23 38.76 2.23
373 374 4.739587 TTTATTGCCATGCATGACACAT 57.260 36.364 28.31 18.68 38.76 3.21
374 375 4.739587 ATTTATTGCCATGCATGACACA 57.260 36.364 28.31 18.81 38.76 3.72
375 376 6.418819 GTCTTATTTATTGCCATGCATGACAC 59.581 38.462 28.31 16.49 38.76 3.67
376 377 6.461370 GGTCTTATTTATTGCCATGCATGACA 60.461 38.462 28.31 20.53 38.76 3.58
377 378 5.922544 GGTCTTATTTATTGCCATGCATGAC 59.077 40.000 28.31 17.77 38.76 3.06
379 380 5.845103 TGGTCTTATTTATTGCCATGCATG 58.155 37.500 20.19 20.19 38.76 4.06
380 381 6.495872 AGATGGTCTTATTTATTGCCATGCAT 59.504 34.615 0.00 0.00 38.76 3.96
382 383 6.336842 AGATGGTCTTATTTATTGCCATGC 57.663 37.500 0.00 0.00 36.91 4.06
383 384 9.234827 TCATAGATGGTCTTATTTATTGCCATG 57.765 33.333 0.00 0.00 36.91 3.66
426 427 9.875691 CAGCCTAATGCATAGTATGATAAAGTA 57.124 33.333 14.52 0.00 44.83 2.24
427 428 7.335422 GCAGCCTAATGCATAGTATGATAAAGT 59.665 37.037 14.52 0.00 45.77 2.66
428 429 7.692088 GCAGCCTAATGCATAGTATGATAAAG 58.308 38.462 14.52 5.40 45.77 1.85
443 444 1.202758 TCCATTACGGGCAGCCTAATG 60.203 52.381 19.91 19.91 34.36 1.90
444 445 1.136828 TCCATTACGGGCAGCCTAAT 58.863 50.000 12.43 5.73 34.36 1.73
445 446 0.913205 TTCCATTACGGGCAGCCTAA 59.087 50.000 12.43 3.22 34.36 2.69
446 447 0.468226 CTTCCATTACGGGCAGCCTA 59.532 55.000 12.43 0.00 34.36 3.93
447 448 1.224592 CTTCCATTACGGGCAGCCT 59.775 57.895 12.43 0.00 34.36 4.58
448 449 0.179468 TACTTCCATTACGGGCAGCC 59.821 55.000 1.26 1.26 34.36 4.85
449 450 2.143925 GATACTTCCATTACGGGCAGC 58.856 52.381 0.00 0.00 34.36 5.25
451 452 4.020573 CCTATGATACTTCCATTACGGGCA 60.021 45.833 0.00 0.00 34.36 5.36
452 453 4.020485 ACCTATGATACTTCCATTACGGGC 60.020 45.833 0.00 0.00 34.36 6.13
454 455 7.463961 ACTACCTATGATACTTCCATTACGG 57.536 40.000 0.00 0.00 0.00 4.02
460 461 7.673926 TGCATGATACTACCTATGATACTTCCA 59.326 37.037 0.00 0.00 0.00 3.53
461 462 8.067751 TGCATGATACTACCTATGATACTTCC 57.932 38.462 0.00 0.00 0.00 3.46
462 463 9.526713 CATGCATGATACTACCTATGATACTTC 57.473 37.037 22.59 0.00 0.00 3.01
465 466 6.703607 GGCATGCATGATACTACCTATGATAC 59.296 42.308 30.64 5.71 0.00 2.24
466 467 6.383726 TGGCATGCATGATACTACCTATGATA 59.616 38.462 30.64 0.87 0.00 2.15
467 468 5.190330 TGGCATGCATGATACTACCTATGAT 59.810 40.000 30.64 0.00 0.00 2.45
468 469 4.531732 TGGCATGCATGATACTACCTATGA 59.468 41.667 30.64 1.93 0.00 2.15
469 470 4.835678 TGGCATGCATGATACTACCTATG 58.164 43.478 30.64 0.23 0.00 2.23
470 471 5.013495 AGTTGGCATGCATGATACTACCTAT 59.987 40.000 30.64 7.77 0.00 2.57
471 472 4.347876 AGTTGGCATGCATGATACTACCTA 59.652 41.667 30.64 13.97 0.00 3.08
474 475 5.334414 GCTTAGTTGGCATGCATGATACTAC 60.334 44.000 30.64 22.16 0.00 2.73
475 476 4.756642 GCTTAGTTGGCATGCATGATACTA 59.243 41.667 30.64 25.19 0.00 1.82
477 478 3.316029 TGCTTAGTTGGCATGCATGATAC 59.684 43.478 30.64 21.28 34.56 2.24
478 479 3.553904 TGCTTAGTTGGCATGCATGATA 58.446 40.909 30.64 14.66 34.56 2.15
479 480 2.380941 TGCTTAGTTGGCATGCATGAT 58.619 42.857 30.64 11.73 34.56 2.45
482 483 3.899052 AATTGCTTAGTTGGCATGCAT 57.101 38.095 21.36 4.57 39.54 3.96
483 484 3.681593 AAATTGCTTAGTTGGCATGCA 57.318 38.095 21.36 2.54 39.54 3.96
484 485 3.995705 TCAAAATTGCTTAGTTGGCATGC 59.004 39.130 9.90 9.90 39.54 4.06
486 487 6.040209 TCATCAAAATTGCTTAGTTGGCAT 57.960 33.333 0.00 0.00 39.54 4.40
487 488 5.465532 TCATCAAAATTGCTTAGTTGGCA 57.534 34.783 0.00 0.00 37.97 4.92
488 489 5.928264 ACTTCATCAAAATTGCTTAGTTGGC 59.072 36.000 0.00 0.00 0.00 4.52
489 490 6.366877 CCACTTCATCAAAATTGCTTAGTTGG 59.633 38.462 0.00 0.00 0.00 3.77
490 491 6.128742 GCCACTTCATCAAAATTGCTTAGTTG 60.129 38.462 0.00 0.00 0.00 3.16
492 493 5.010922 TGCCACTTCATCAAAATTGCTTAGT 59.989 36.000 0.00 0.00 0.00 2.24
493 494 5.472148 TGCCACTTCATCAAAATTGCTTAG 58.528 37.500 0.00 0.00 0.00 2.18
495 496 4.339872 TGCCACTTCATCAAAATTGCTT 57.660 36.364 0.00 0.00 0.00 3.91
496 497 4.546829 ATGCCACTTCATCAAAATTGCT 57.453 36.364 0.00 0.00 0.00 3.91
497 498 5.653507 TCTATGCCACTTCATCAAAATTGC 58.346 37.500 0.00 0.00 0.00 3.56
503 504 9.187996 TCATTTAATTCTATGCCACTTCATCAA 57.812 29.630 0.00 0.00 0.00 2.57
504 505 8.750515 TCATTTAATTCTATGCCACTTCATCA 57.249 30.769 0.00 0.00 0.00 3.07
506 507 9.412460 TCTTCATTTAATTCTATGCCACTTCAT 57.588 29.630 0.00 0.00 0.00 2.57
507 508 8.806429 TCTTCATTTAATTCTATGCCACTTCA 57.194 30.769 0.00 0.00 0.00 3.02
511 512 9.727627 CTCTTTCTTCATTTAATTCTATGCCAC 57.272 33.333 0.00 0.00 0.00 5.01
512 513 9.685276 TCTCTTTCTTCATTTAATTCTATGCCA 57.315 29.630 0.00 0.00 0.00 4.92
524 525 9.651913 GATACTCAAGTCTCTCTTTCTTCATTT 57.348 33.333 0.00 0.00 33.63 2.32
526 527 8.359875 TGATACTCAAGTCTCTCTTTCTTCAT 57.640 34.615 0.00 0.00 33.63 2.57
527 528 7.767250 TGATACTCAAGTCTCTCTTTCTTCA 57.233 36.000 0.00 0.00 33.63 3.02
559 560 9.890629 AGCACATCATTTAATATGATACGGTAT 57.109 29.630 0.00 0.00 36.69 2.73
561 562 9.151471 GTAGCACATCATTTAATATGATACGGT 57.849 33.333 10.72 11.66 36.69 4.83
562 563 9.371136 AGTAGCACATCATTTAATATGATACGG 57.629 33.333 10.72 6.78 36.69 4.02
571 572 8.109705 TGACACAAAGTAGCACATCATTTAAT 57.890 30.769 0.00 0.00 0.00 1.40
572 573 7.503521 TGACACAAAGTAGCACATCATTTAA 57.496 32.000 0.00 0.00 0.00 1.52
575 576 5.620654 GCATGACACAAAGTAGCACATCATT 60.621 40.000 0.00 0.00 0.00 2.57
576 577 4.142534 GCATGACACAAAGTAGCACATCAT 60.143 41.667 0.00 0.00 0.00 2.45
578 579 3.189080 TGCATGACACAAAGTAGCACATC 59.811 43.478 0.00 0.00 30.65 3.06
579 580 3.148412 TGCATGACACAAAGTAGCACAT 58.852 40.909 0.00 0.00 30.65 3.21
580 581 2.570135 TGCATGACACAAAGTAGCACA 58.430 42.857 0.00 0.00 30.65 4.57
581 582 3.495193 CATGCATGACACAAAGTAGCAC 58.505 45.455 22.59 0.00 36.06 4.40
582 583 2.488937 CCATGCATGACACAAAGTAGCA 59.511 45.455 28.31 0.00 37.13 3.49
583 584 2.733227 GCCATGCATGACACAAAGTAGC 60.733 50.000 28.31 14.15 0.00 3.58
584 585 2.488937 TGCCATGCATGACACAAAGTAG 59.511 45.455 28.31 8.01 31.71 2.57
585 586 2.512705 TGCCATGCATGACACAAAGTA 58.487 42.857 28.31 5.91 31.71 2.24
588 589 4.532314 TTATTGCCATGCATGACACAAA 57.468 36.364 28.31 15.45 38.76 2.83
589 590 4.532314 TTTATTGCCATGCATGACACAA 57.468 36.364 28.31 25.14 38.76 3.33
590 591 4.739587 ATTTATTGCCATGCATGACACA 57.260 36.364 28.31 18.81 38.76 3.72
591 592 7.596494 ACTATATTTATTGCCATGCATGACAC 58.404 34.615 28.31 16.49 38.76 3.67
592 593 7.094248 GGACTATATTTATTGCCATGCATGACA 60.094 37.037 28.31 20.53 38.76 3.58
593 594 7.121759 AGGACTATATTTATTGCCATGCATGAC 59.878 37.037 28.31 17.77 38.76 3.06
594 595 7.177184 AGGACTATATTTATTGCCATGCATGA 58.823 34.615 28.31 8.76 38.76 3.07
597 598 6.782986 AGAGGACTATATTTATTGCCATGCA 58.217 36.000 0.00 0.00 36.47 3.96
598 599 8.834465 CATAGAGGACTATATTTATTGCCATGC 58.166 37.037 0.00 0.00 37.24 4.06
613 614 9.997172 ATCATATGTTGGTATCATAGAGGACTA 57.003 33.333 1.90 0.00 32.43 2.59
616 617 9.997172 AGTATCATATGTTGGTATCATAGAGGA 57.003 33.333 1.90 0.00 32.43 3.71
627 628 9.399797 CCATAATGCATAGTATCATATGTTGGT 57.600 33.333 0.00 0.00 35.87 3.67
628 629 9.617523 TCCATAATGCATAGTATCATATGTTGG 57.382 33.333 0.00 0.00 35.87 3.77
681 682 8.798402 GGGGAGTATCATATACTAGTATCATGC 58.202 40.741 18.68 12.34 36.25 4.06
682 683 9.868160 TGGGGAGTATCATATACTAGTATCATG 57.132 37.037 18.68 17.93 36.25 3.07
691 692 7.737607 TGGTTGTAATGGGGAGTATCATATACT 59.262 37.037 0.00 0.00 36.25 2.12
692 693 7.913789 TGGTTGTAATGGGGAGTATCATATAC 58.086 38.462 0.00 0.00 36.25 1.47
694 695 6.522459 GCTGGTTGTAATGGGGAGTATCATAT 60.522 42.308 0.00 0.00 36.25 1.78
696 697 4.446311 GCTGGTTGTAATGGGGAGTATCAT 60.446 45.833 0.00 0.00 36.25 2.45
697 698 3.118038 GCTGGTTGTAATGGGGAGTATCA 60.118 47.826 0.00 0.00 36.25 2.15
698 699 3.477530 GCTGGTTGTAATGGGGAGTATC 58.522 50.000 0.00 0.00 0.00 2.24
699 700 2.174854 GGCTGGTTGTAATGGGGAGTAT 59.825 50.000 0.00 0.00 0.00 2.12
700 701 1.562475 GGCTGGTTGTAATGGGGAGTA 59.438 52.381 0.00 0.00 0.00 2.59
701 702 0.331616 GGCTGGTTGTAATGGGGAGT 59.668 55.000 0.00 0.00 0.00 3.85
702 703 0.625849 AGGCTGGTTGTAATGGGGAG 59.374 55.000 0.00 0.00 0.00 4.30
703 704 1.080638 AAGGCTGGTTGTAATGGGGA 58.919 50.000 0.00 0.00 0.00 4.81
705 706 2.241176 TCCTAAGGCTGGTTGTAATGGG 59.759 50.000 0.00 0.00 0.00 4.00
706 707 3.644966 TCCTAAGGCTGGTTGTAATGG 57.355 47.619 0.00 0.00 0.00 3.16
707 708 3.947834 CCTTCCTAAGGCTGGTTGTAATG 59.052 47.826 0.00 0.00 42.78 1.90
764 765 9.601810 TGGTTGTAATGAGGAGTATCATATACT 57.398 33.333 0.00 0.00 39.00 2.12
765 766 9.862371 CTGGTTGTAATGAGGAGTATCATATAC 57.138 37.037 0.00 0.00 39.00 1.47
766 767 8.531982 GCTGGTTGTAATGAGGAGTATCATATA 58.468 37.037 0.00 0.00 39.00 0.86
767 768 7.390027 GCTGGTTGTAATGAGGAGTATCATAT 58.610 38.462 0.00 0.00 39.00 1.78
768 769 6.239600 GGCTGGTTGTAATGAGGAGTATCATA 60.240 42.308 0.00 0.00 39.00 2.15
769 770 5.455326 GGCTGGTTGTAATGAGGAGTATCAT 60.455 44.000 0.00 0.00 41.72 2.45
770 771 4.141711 GGCTGGTTGTAATGAGGAGTATCA 60.142 45.833 0.00 0.00 36.25 2.15
772 773 4.040755 AGGCTGGTTGTAATGAGGAGTAT 58.959 43.478 0.00 0.00 0.00 2.12
773 774 3.197766 CAGGCTGGTTGTAATGAGGAGTA 59.802 47.826 6.61 0.00 0.00 2.59
774 775 2.026822 CAGGCTGGTTGTAATGAGGAGT 60.027 50.000 6.61 0.00 0.00 3.85
775 776 2.237143 TCAGGCTGGTTGTAATGAGGAG 59.763 50.000 15.73 0.00 0.00 3.69
776 777 2.027192 GTCAGGCTGGTTGTAATGAGGA 60.027 50.000 15.73 0.00 0.00 3.71
777 778 2.290260 TGTCAGGCTGGTTGTAATGAGG 60.290 50.000 15.73 0.00 0.00 3.86
778 779 3.005554 CTGTCAGGCTGGTTGTAATGAG 58.994 50.000 15.73 0.00 0.00 2.90
779 780 2.637382 TCTGTCAGGCTGGTTGTAATGA 59.363 45.455 15.73 0.00 0.00 2.57
780 781 3.057969 TCTGTCAGGCTGGTTGTAATG 57.942 47.619 15.73 0.00 0.00 1.90
781 782 3.614092 CATCTGTCAGGCTGGTTGTAAT 58.386 45.455 15.73 0.00 0.00 1.89
782 783 2.290260 CCATCTGTCAGGCTGGTTGTAA 60.290 50.000 15.73 0.00 0.00 2.41
784 785 0.037303 CCATCTGTCAGGCTGGTTGT 59.963 55.000 15.73 0.00 0.00 3.32
786 787 1.556911 CTACCATCTGTCAGGCTGGTT 59.443 52.381 24.27 13.68 41.98 3.67
787 788 1.198713 CTACCATCTGTCAGGCTGGT 58.801 55.000 23.25 23.25 44.07 4.00
788 789 1.489481 TCTACCATCTGTCAGGCTGG 58.511 55.000 15.73 16.48 34.84 4.85
789 790 3.616956 TTTCTACCATCTGTCAGGCTG 57.383 47.619 8.58 8.58 0.00 4.85
790 791 3.584848 AGTTTTCTACCATCTGTCAGGCT 59.415 43.478 0.00 0.00 0.00 4.58
791 792 3.935828 GAGTTTTCTACCATCTGTCAGGC 59.064 47.826 0.00 0.00 0.00 4.85
846 1073 7.012044 GCTGTGGTAATAATATTTCTGTCCGTT 59.988 37.037 0.00 0.00 0.00 4.44
938 1186 2.114616 TGCTGTTGGTTTGGTTTGGAT 58.885 42.857 0.00 0.00 0.00 3.41
954 1202 1.597854 TCCCTCTTTGCGTGTGCTG 60.598 57.895 0.00 0.00 43.34 4.41
961 1209 2.861462 TTTTTGTGTCCCTCTTTGCG 57.139 45.000 0.00 0.00 0.00 4.85
1272 1534 1.133598 CCGTATAGCGAGTTGACACCA 59.866 52.381 0.00 0.00 44.77 4.17
1675 2753 2.574006 TGCATGCTCTGGAAACTTCT 57.426 45.000 20.33 0.00 0.00 2.85
1766 2844 4.987408 TTCGACCCGACATCAAATACTA 57.013 40.909 0.00 0.00 34.89 1.82
1823 2901 0.555769 TTCCAACTTGGGGAGCTTGT 59.444 50.000 8.01 0.00 38.32 3.16
1856 2934 2.821969 GTTCCTGTGAAGTGATTGGCAT 59.178 45.455 0.00 0.00 0.00 4.40
2176 3261 2.307768 CGCAGGTATACTCCCAGAGAA 58.692 52.381 2.25 0.00 33.32 2.87
2489 3576 7.331026 AGAAAGGCTAGGCAATTTAAAAATCC 58.669 34.615 19.70 0.00 0.00 3.01
2586 3673 4.451629 TCCTGATAGAACAAGTCGGTTC 57.548 45.455 0.00 0.00 45.87 3.62
3034 4142 6.917533 AGATTACAAAAGACTTTGGCATCTG 58.082 36.000 13.43 5.51 45.30 2.90
3049 4157 6.350528 CCAGCTGTCACTAGAGAGATTACAAA 60.351 42.308 13.81 0.00 37.33 2.83
3157 4265 7.605410 AATGGTCATCAGCAATTGAATTTTC 57.395 32.000 10.34 0.00 39.77 2.29
3414 4522 2.290641 GTGGTTGACGCTTGAACAAGAT 59.709 45.455 17.19 5.31 40.79 2.40
3684 4792 4.166725 AGGATCCTTGATATGCCAAAGTCA 59.833 41.667 9.02 0.00 0.00 3.41
4051 5159 1.202710 TGTTGTCCGTTGTGTAGCCAT 60.203 47.619 0.00 0.00 0.00 4.40
4233 5341 1.908068 GCCCTCCATGCTCCCCTATAT 60.908 57.143 0.00 0.00 0.00 0.86
4344 5453 2.006169 GTTGCAAATAAAATGGGCCCG 58.994 47.619 19.37 0.00 0.00 6.13
4397 5508 9.525826 ACCTGATTCAAACAATAAGAAATCTCT 57.474 29.630 0.00 0.00 0.00 3.10
4420 5531 1.826487 GTGACACCGGCCAAAACCT 60.826 57.895 0.00 0.00 0.00 3.50
4427 5538 2.363975 TAGGGATGTGACACCGGCC 61.364 63.158 0.00 0.00 0.00 6.13
4472 5583 7.475771 TGAATTTAAACAGGATGCAAACAAC 57.524 32.000 0.00 0.00 42.53 3.32
4514 5625 6.263168 CCATTTGGTACTAGGGTTTGATCATC 59.737 42.308 0.00 0.00 0.00 2.92
4530 5641 8.657387 TGAACCTATTTGAATTCCATTTGGTA 57.343 30.769 2.27 0.00 36.34 3.25
4560 5671 9.566432 TTGGGTGCACTGAAAATATTTTTAATT 57.434 25.926 17.98 0.00 0.00 1.40
4561 5672 9.566432 TTTGGGTGCACTGAAAATATTTTTAAT 57.434 25.926 17.98 0.00 0.00 1.40
4593 5704 8.929827 TGTGCCATAATCATGAACATTTTTAG 57.070 30.769 0.00 0.00 33.67 1.85
4642 5755 7.253422 CAGAAATTTCCTAGGTAAATGTGCAG 58.747 38.462 14.61 1.82 0.00 4.41
4660 5773 6.133356 TGGGTTAACTCAAAGACCAGAAATT 58.867 36.000 5.47 0.00 33.81 1.82
4709 5822 9.566432 AACTTTTCAGGATTATTGGAGCTATAG 57.434 33.333 0.00 0.00 0.00 1.31
4725 5838 2.291741 GAGCACCTCACAACTTTTCAGG 59.708 50.000 0.00 0.00 0.00 3.86
4850 5963 5.479027 GCCAGGTGAGTTTTCCCTTTTATTA 59.521 40.000 0.00 0.00 0.00 0.98
4984 6097 1.805945 GTGTCGTGGCGCTCTTAGG 60.806 63.158 7.64 0.00 0.00 2.69
5005 6118 4.787280 AGCTCGAGGGGGTCCAGG 62.787 72.222 15.58 0.00 34.83 4.45
5039 6152 3.535962 GAGCGAGCCAGAGGAGGG 61.536 72.222 0.00 0.00 0.00 4.30
5040 6153 2.441901 AGAGCGAGCCAGAGGAGG 60.442 66.667 0.00 0.00 0.00 4.30
5041 6154 1.447317 GAGAGAGCGAGCCAGAGGAG 61.447 65.000 0.00 0.00 0.00 3.69
5042 6155 1.453015 GAGAGAGCGAGCCAGAGGA 60.453 63.158 0.00 0.00 0.00 3.71
5043 6156 2.833533 CGAGAGAGCGAGCCAGAGG 61.834 68.421 0.00 0.00 0.00 3.69
5044 6157 2.715005 CGAGAGAGCGAGCCAGAG 59.285 66.667 0.00 0.00 0.00 3.35
5045 6158 3.513438 GCGAGAGAGCGAGCCAGA 61.513 66.667 0.00 0.00 0.00 3.86
5046 6159 3.136345 ATGCGAGAGAGCGAGCCAG 62.136 63.158 0.00 0.00 40.67 4.85
5047 6160 3.143515 ATGCGAGAGAGCGAGCCA 61.144 61.111 0.00 0.00 40.67 4.75
5048 6161 2.619840 TTCATGCGAGAGAGCGAGCC 62.620 60.000 0.00 0.00 40.67 4.70
5049 6162 0.597118 ATTCATGCGAGAGAGCGAGC 60.597 55.000 0.00 0.00 40.67 5.03
5050 6163 1.407434 GATTCATGCGAGAGAGCGAG 58.593 55.000 0.00 0.00 40.67 5.03
5051 6164 0.031314 GGATTCATGCGAGAGAGCGA 59.969 55.000 0.00 0.00 40.67 4.93
5052 6165 1.274126 CGGATTCATGCGAGAGAGCG 61.274 60.000 0.00 0.00 44.78 5.03
5053 6166 0.031314 TCGGATTCATGCGAGAGAGC 59.969 55.000 0.00 0.00 45.57 4.09
5060 6173 1.815003 TGGCACTCGGATTCATGCG 60.815 57.895 0.00 0.00 43.28 4.73
5061 6174 1.718757 GGTGGCACTCGGATTCATGC 61.719 60.000 18.45 0.00 37.35 4.06
5062 6175 0.392863 TGGTGGCACTCGGATTCATG 60.393 55.000 18.45 0.00 0.00 3.07
5063 6176 0.548031 ATGGTGGCACTCGGATTCAT 59.452 50.000 18.45 7.50 0.00 2.57
5064 6177 0.107703 GATGGTGGCACTCGGATTCA 60.108 55.000 18.45 5.23 0.00 2.57
5065 6178 1.154205 CGATGGTGGCACTCGGATTC 61.154 60.000 18.45 0.00 0.00 2.52
5066 6179 1.153369 CGATGGTGGCACTCGGATT 60.153 57.895 18.45 0.00 0.00 3.01
5067 6180 2.501128 CGATGGTGGCACTCGGAT 59.499 61.111 18.45 4.73 0.00 4.18
5068 6181 4.451150 GCGATGGTGGCACTCGGA 62.451 66.667 24.62 6.55 33.17 4.55
5084 6197 4.699522 AGAACAACGAGGGGCGGC 62.700 66.667 0.00 0.00 46.49 6.53
5085 6198 2.434359 GAGAACAACGAGGGGCGG 60.434 66.667 0.00 0.00 46.49 6.13
5087 6200 2.027625 CACGAGAACAACGAGGGGC 61.028 63.158 0.00 0.00 34.70 5.80
5088 6201 1.374252 CCACGAGAACAACGAGGGG 60.374 63.158 0.00 0.00 37.72 4.79
5089 6202 2.027625 GCCACGAGAACAACGAGGG 61.028 63.158 0.00 0.00 40.63 4.30
5090 6203 2.027625 GGCCACGAGAACAACGAGG 61.028 63.158 0.00 0.00 42.49 4.63
5091 6204 1.300620 TGGCCACGAGAACAACGAG 60.301 57.895 0.00 0.00 34.70 4.18
5092 6205 1.593209 GTGGCCACGAGAACAACGA 60.593 57.895 22.49 0.00 34.70 3.85
5093 6206 2.604174 GGTGGCCACGAGAACAACG 61.604 63.158 29.08 0.00 0.00 4.10
5094 6207 0.889186 ATGGTGGCCACGAGAACAAC 60.889 55.000 29.08 13.30 35.80 3.32
5095 6208 0.888736 CATGGTGGCCACGAGAACAA 60.889 55.000 29.08 8.98 35.80 2.83
5096 6209 1.302431 CATGGTGGCCACGAGAACA 60.302 57.895 29.08 20.72 35.80 3.18
5097 6210 2.690778 GCATGGTGGCCACGAGAAC 61.691 63.158 29.08 15.54 35.80 3.01
5098 6211 2.359850 GCATGGTGGCCACGAGAA 60.360 61.111 29.08 15.06 35.80 2.87
5099 6212 3.635191 TGCATGGTGGCCACGAGA 61.635 61.111 29.08 16.03 35.80 4.04
5100 6213 3.434319 GTGCATGGTGGCCACGAG 61.434 66.667 29.08 21.01 35.80 4.18
5125 6238 4.394078 TTCGGACACGTCGGCGAG 62.394 66.667 20.03 12.09 42.00 5.03
5126 6239 4.394078 CTTCGGACACGTCGGCGA 62.394 66.667 20.03 4.99 42.00 5.54
5127 6240 4.695231 ACTTCGGACACGTCGGCG 62.695 66.667 8.42 8.42 44.93 6.46
5128 6241 3.103911 CACTTCGGACACGTCGGC 61.104 66.667 0.00 0.00 41.85 5.54
5129 6242 0.040157 TAACACTTCGGACACGTCGG 60.040 55.000 0.00 0.00 41.85 4.79
5130 6243 1.069703 TCTAACACTTCGGACACGTCG 60.070 52.381 0.00 0.00 41.85 5.12
5131 6244 2.693797 TCTAACACTTCGGACACGTC 57.306 50.000 0.00 0.00 41.85 4.34
5132 6245 2.288030 CCTTCTAACACTTCGGACACGT 60.288 50.000 0.00 0.00 41.85 4.49
5133 6246 2.325761 CCTTCTAACACTTCGGACACG 58.674 52.381 0.00 0.00 42.74 4.49
5134 6247 2.298163 TCCCTTCTAACACTTCGGACAC 59.702 50.000 0.00 0.00 0.00 3.67
5135 6248 2.561419 CTCCCTTCTAACACTTCGGACA 59.439 50.000 0.00 0.00 0.00 4.02
5136 6249 2.824341 TCTCCCTTCTAACACTTCGGAC 59.176 50.000 0.00 0.00 0.00 4.79
5137 6250 3.090037 CTCTCCCTTCTAACACTTCGGA 58.910 50.000 0.00 0.00 0.00 4.55
5138 6251 3.090037 TCTCTCCCTTCTAACACTTCGG 58.910 50.000 0.00 0.00 0.00 4.30
5139 6252 4.011023 TCTCTCTCCCTTCTAACACTTCG 58.989 47.826 0.00 0.00 0.00 3.79
5140 6253 5.258051 TCTCTCTCTCCCTTCTAACACTTC 58.742 45.833 0.00 0.00 0.00 3.01
5141 6254 5.263872 TCTCTCTCTCCCTTCTAACACTT 57.736 43.478 0.00 0.00 0.00 3.16
5228 6343 1.133637 TGGCTTGCCTTGTACTCCAAA 60.134 47.619 13.18 0.00 31.20 3.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.