Multiple sequence alignment - TraesCS6A01G015500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G015500 chr6A 100.000 3322 0 0 1 3322 7696466 7699787 0.000000e+00 6135.0
1 TraesCS6A01G015500 chr6A 89.652 1034 95 6 1311 2340 7398217 7397192 0.000000e+00 1306.0
2 TraesCS6A01G015500 chr6A 85.279 197 24 4 1032 1224 7398520 7398325 7.270000e-47 198.0
3 TraesCS6A01G015500 chr6D 91.908 1866 74 36 966 2782 7551921 7553758 0.000000e+00 2538.0
4 TraesCS6A01G015500 chr6D 90.360 778 50 19 966 1725 7508697 7507927 0.000000e+00 998.0
5 TraesCS6A01G015500 chr6D 82.456 798 80 19 1 780 7509746 7508991 0.000000e+00 643.0
6 TraesCS6A01G015500 chr6D 83.424 736 78 15 1 718 7550872 7551581 0.000000e+00 643.0
7 TraesCS6A01G015500 chr6D 94.757 267 11 3 966 1230 7512606 7512341 2.380000e-111 412.0
8 TraesCS6A01G015500 chr6D 92.179 179 14 0 788 966 7508917 7508739 1.530000e-63 254.0
9 TraesCS6A01G015500 chr6D 92.179 179 14 0 788 966 7551701 7551879 1.530000e-63 254.0
10 TraesCS6A01G015500 chr6D 92.958 142 9 1 826 966 7512789 7512648 4.340000e-49 206.0
11 TraesCS6A01G015500 chr6B 90.288 1843 93 50 965 2776 14126171 14127958 0.000000e+00 2333.0
12 TraesCS6A01G015500 chr6B 90.445 1078 90 8 1311 2384 13975272 13974204 0.000000e+00 1408.0
13 TraesCS6A01G015500 chr6B 83.814 797 85 16 1 780 14125124 14125893 0.000000e+00 717.0
14 TraesCS6A01G015500 chr6B 85.263 190 23 5 1036 1224 13975608 13975423 1.220000e-44 191.0
15 TraesCS6A01G015500 chr5A 84.882 1270 157 22 1084 2322 687655162 687656427 0.000000e+00 1249.0
16 TraesCS6A01G015500 chr4D 84.597 1253 162 20 1084 2322 503175936 503177171 0.000000e+00 1216.0
17 TraesCS6A01G015500 chr4B 83.710 1240 161 33 1104 2322 648269316 648270535 0.000000e+00 1133.0
18 TraesCS6A01G015500 chr4B 83.629 1240 162 33 1104 2322 648243286 648244505 0.000000e+00 1127.0
19 TraesCS6A01G015500 chr4B 83.535 1239 165 32 1104 2322 648194018 648195237 0.000000e+00 1122.0
20 TraesCS6A01G015500 chr4B 85.939 1017 130 12 1311 2322 648219623 648220631 0.000000e+00 1074.0
21 TraesCS6A01G015500 chr4B 85.686 1020 132 9 1311 2322 647693611 647692598 0.000000e+00 1062.0
22 TraesCS6A01G015500 chr4B 89.583 144 15 0 1084 1227 647693849 647693706 2.040000e-42 183.0
23 TraesCS6A01G015500 chr2D 81.081 111 15 3 345 455 557210142 557210246 2.120000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G015500 chr6A 7696466 7699787 3321 False 6135.0 6135 100.000000 1 3322 1 chr6A.!!$F1 3321
1 TraesCS6A01G015500 chr6A 7397192 7398520 1328 True 752.0 1306 87.465500 1032 2340 2 chr6A.!!$R1 1308
2 TraesCS6A01G015500 chr6D 7550872 7553758 2886 False 1145.0 2538 89.170333 1 2782 3 chr6D.!!$F1 2781
3 TraesCS6A01G015500 chr6D 7507927 7512789 4862 True 502.6 998 90.542000 1 1725 5 chr6D.!!$R1 1724
4 TraesCS6A01G015500 chr6B 14125124 14127958 2834 False 1525.0 2333 87.051000 1 2776 2 chr6B.!!$F1 2775
5 TraesCS6A01G015500 chr6B 13974204 13975608 1404 True 799.5 1408 87.854000 1036 2384 2 chr6B.!!$R1 1348
6 TraesCS6A01G015500 chr5A 687655162 687656427 1265 False 1249.0 1249 84.882000 1084 2322 1 chr5A.!!$F1 1238
7 TraesCS6A01G015500 chr4D 503175936 503177171 1235 False 1216.0 1216 84.597000 1084 2322 1 chr4D.!!$F1 1238
8 TraesCS6A01G015500 chr4B 648269316 648270535 1219 False 1133.0 1133 83.710000 1104 2322 1 chr4B.!!$F4 1218
9 TraesCS6A01G015500 chr4B 648243286 648244505 1219 False 1127.0 1127 83.629000 1104 2322 1 chr4B.!!$F3 1218
10 TraesCS6A01G015500 chr4B 648194018 648195237 1219 False 1122.0 1122 83.535000 1104 2322 1 chr4B.!!$F1 1218
11 TraesCS6A01G015500 chr4B 648219623 648220631 1008 False 1074.0 1074 85.939000 1311 2322 1 chr4B.!!$F2 1011
12 TraesCS6A01G015500 chr4B 647692598 647693849 1251 True 622.5 1062 87.634500 1084 2322 2 chr4B.!!$R1 1238

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
130 3174 0.036388 ATGTGTTCCTACTGTGCCCG 60.036 55.0 0.0 0.0 0.0 6.13 F
897 4027 0.316204 CAGCCAACCAGCCAAAGAAG 59.684 55.0 0.0 0.0 0.0 2.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2019 5305 1.134580 AGACGGAAGATGAGCACCATG 60.135 52.381 0.0 0.0 35.17 3.66 R
2807 6142 0.400213 AAAAGGTGACTGCATCCCGA 59.600 50.000 0.0 0.0 42.68 5.14 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 3070 1.633774 GGAGGGTGTCTCTCAAGTCA 58.366 55.000 0.00 0.00 42.10 3.41
59 3103 3.528597 AGAATTAGCGAGGAGGTCAAC 57.471 47.619 0.00 0.00 0.00 3.18
73 3117 0.238289 GTCAACCCATCAACTGCACG 59.762 55.000 0.00 0.00 0.00 5.34
78 3122 0.238289 CCCATCAACTGCACGAACAC 59.762 55.000 0.00 0.00 0.00 3.32
88 3132 1.007336 GCACGAACACTCCGTCGAAT 61.007 55.000 0.00 0.00 38.29 3.34
89 3133 0.708370 CACGAACACTCCGTCGAATG 59.292 55.000 0.00 0.00 38.29 2.67
101 3145 2.032030 CCGTCGAATGCAAAGACAAGTT 60.032 45.455 16.23 0.00 34.80 2.66
102 3146 2.966708 CGTCGAATGCAAAGACAAGTTG 59.033 45.455 16.23 0.00 34.80 3.16
110 3154 2.374184 CAAAGACAAGTTGGGTGGTCA 58.626 47.619 7.96 0.00 32.79 4.02
124 3168 3.074412 GGTGGTCAATGTGTTCCTACTG 58.926 50.000 0.00 0.00 0.00 2.74
130 3174 0.036388 ATGTGTTCCTACTGTGCCCG 60.036 55.000 0.00 0.00 0.00 6.13
132 3176 2.436115 GTTCCTACTGTGCCCGGC 60.436 66.667 1.04 1.04 0.00 6.13
198 3242 5.768317 GTGTTATAACAACACCATGCACTT 58.232 37.500 19.63 0.00 43.39 3.16
199 3243 5.856455 GTGTTATAACAACACCATGCACTTC 59.144 40.000 19.63 0.00 43.39 3.01
218 3262 6.591834 GCACTTCACTACAAACACTATCATCT 59.408 38.462 0.00 0.00 0.00 2.90
240 3284 3.660501 TGACCAGTCACATACTCACAC 57.339 47.619 0.00 0.00 35.76 3.82
242 3286 3.243737 TGACCAGTCACATACTCACACAC 60.244 47.826 0.00 0.00 35.76 3.82
255 3299 0.601046 CACACACGACATGGCTGAGT 60.601 55.000 0.00 0.00 0.00 3.41
258 3302 1.375140 CACGACATGGCTGAGTGCT 60.375 57.895 0.00 0.00 42.39 4.40
267 3311 1.337447 TGGCTGAGTGCTAAACGGTAC 60.337 52.381 0.00 0.00 42.39 3.34
451 3495 8.207545 TGTGTAACATGCATGTCATACCTTATA 58.792 33.333 31.45 14.47 45.67 0.98
462 3506 5.475909 TGTCATACCTTATAGCTCTAACCCG 59.524 44.000 0.00 0.00 0.00 5.28
472 3516 2.158726 AGCTCTAACCCGTGGTCAAAAA 60.159 45.455 0.00 0.00 33.12 1.94
480 3524 4.208746 ACCCGTGGTCAAAAATAAACTCA 58.791 39.130 0.00 0.00 0.00 3.41
485 3531 7.225734 CCCGTGGTCAAAAATAAACTCAAAAAT 59.774 33.333 0.00 0.00 0.00 1.82
489 3535 9.672673 TGGTCAAAAATAAACTCAAAAATGGAA 57.327 25.926 0.00 0.00 0.00 3.53
510 3556 6.183361 TGGAATATCGGCCCTATATATTTGGG 60.183 42.308 15.43 15.43 43.62 4.12
516 3562 4.443034 CGGCCCTATATATTTGGGTAGAGC 60.443 50.000 18.87 8.65 42.77 4.09
517 3563 4.443034 GGCCCTATATATTTGGGTAGAGCG 60.443 50.000 18.87 0.00 42.77 5.03
532 3594 1.134670 AGAGCGAGTGATGGGCTAAAC 60.135 52.381 0.00 0.00 37.10 2.01
559 3621 3.679389 GATAACCATGCATAGTCCAGGG 58.321 50.000 0.00 0.00 39.87 4.45
566 3628 1.562475 TGCATAGTCCAGGGGGTTTAC 59.438 52.381 0.00 0.00 34.93 2.01
605 3667 5.362556 AAAACGATGACATGTCCTTCTTG 57.637 39.130 22.85 10.98 0.00 3.02
606 3668 2.977914 ACGATGACATGTCCTTCTTGG 58.022 47.619 22.85 9.72 37.10 3.61
607 3669 1.667724 CGATGACATGTCCTTCTTGGC 59.332 52.381 22.85 0.00 35.26 4.52
608 3670 2.715046 GATGACATGTCCTTCTTGGCA 58.285 47.619 22.85 1.86 42.17 4.92
609 3671 1.896220 TGACATGTCCTTCTTGGCAC 58.104 50.000 22.85 0.00 34.85 5.01
610 3672 1.142667 TGACATGTCCTTCTTGGCACA 59.857 47.619 22.85 0.00 34.85 4.57
611 3673 1.808945 GACATGTCCTTCTTGGCACAG 59.191 52.381 15.31 0.00 42.39 3.66
612 3674 1.143684 ACATGTCCTTCTTGGCACAGT 59.856 47.619 0.00 0.00 42.39 3.55
615 3677 1.211703 TGTCCTTCTTGGCACAGTCAA 59.788 47.619 0.00 0.00 42.39 3.18
623 3685 2.057137 TGGCACAGTCAAGCTCTTTT 57.943 45.000 0.00 0.00 0.00 2.27
635 3697 6.321181 AGTCAAGCTCTTTTTGATTTACCACA 59.679 34.615 0.00 0.00 36.96 4.17
640 3702 5.175673 GCTCTTTTTGATTTACCACAAGCAC 59.824 40.000 0.00 0.00 0.00 4.40
644 3706 8.417106 TCTTTTTGATTTACCACAAGCACATTA 58.583 29.630 0.00 0.00 0.00 1.90
672 3734 4.858850 ACCTTGCATCTTCCATGTCATTA 58.141 39.130 0.00 0.00 0.00 1.90
678 3740 4.024218 GCATCTTCCATGTCATTAGCAGAC 60.024 45.833 0.00 0.00 36.55 3.51
679 3741 5.366460 CATCTTCCATGTCATTAGCAGACT 58.634 41.667 0.00 0.00 36.94 3.24
684 3746 4.099113 TCCATGTCATTAGCAGACTCTCTG 59.901 45.833 0.00 0.00 46.90 3.35
711 3773 3.846180 CAAGGAATGCCCCCATCG 58.154 61.111 0.00 0.00 34.66 3.84
722 3784 1.882352 GCCCCCATCGATTGTGGATAC 60.882 57.143 5.07 0.00 39.12 2.24
786 3850 0.462789 GCCATTTGCTTCATCCCTGG 59.537 55.000 0.00 0.00 36.87 4.45
818 3948 2.161486 GCTGCGTCCGAAGCTGTAG 61.161 63.158 12.38 2.29 43.33 2.74
859 3989 2.116125 AGGGCAGCCACTCAAACC 59.884 61.111 15.19 0.00 0.00 3.27
884 4014 3.299977 CAGCTTGCAGCCAGCCAA 61.300 61.111 14.78 0.00 43.77 4.52
897 4027 0.316204 CAGCCAACCAGCCAAAGAAG 59.684 55.000 0.00 0.00 0.00 2.85
901 4031 1.035139 CAACCAGCCAAAGAAGCAGT 58.965 50.000 0.00 0.00 0.00 4.40
909 4039 5.065731 CCAGCCAAAGAAGCAGTCTATAAAG 59.934 44.000 0.00 0.00 34.56 1.85
958 4088 1.541310 AAGCTGCTGCATGCCATTGT 61.541 50.000 16.68 0.00 42.74 2.71
961 4091 1.385528 CTGCTGCATGCCATTGTAGA 58.614 50.000 16.68 0.00 42.00 2.59
966 4096 3.794475 GCTGCATGCCATTGTAGATTCAC 60.794 47.826 16.68 0.00 31.72 3.18
967 4097 3.354467 TGCATGCCATTGTAGATTCACA 58.646 40.909 16.68 0.00 0.00 3.58
968 4098 3.762823 TGCATGCCATTGTAGATTCACAA 59.237 39.130 16.68 4.80 42.32 3.33
970 4100 4.802039 GCATGCCATTGTAGATTCACAAAG 59.198 41.667 6.36 3.04 41.50 2.77
971 4101 4.439305 TGCCATTGTAGATTCACAAAGC 57.561 40.909 13.85 13.85 41.50 3.51
1018 4190 0.394216 CATGGGAAGCATCGGAACCA 60.394 55.000 0.00 0.00 0.00 3.67
1028 4206 3.353836 CGGAACCACCAACGGCAG 61.354 66.667 0.00 0.00 38.90 4.85
1227 4414 5.504337 GCTCACCAGAATCTGTACTACTACG 60.504 48.000 9.63 0.00 0.00 3.51
1228 4415 5.494724 TCACCAGAATCTGTACTACTACGT 58.505 41.667 9.63 0.00 0.00 3.57
1230 4417 7.105588 TCACCAGAATCTGTACTACTACGTTA 58.894 38.462 9.63 0.00 0.00 3.18
1236 4423 9.658799 AGAATCTGTACTACTACGTTAACTACA 57.341 33.333 3.71 3.13 0.00 2.74
1237 4424 9.913451 GAATCTGTACTACTACGTTAACTACAG 57.087 37.037 16.83 16.83 33.76 2.74
1249 4452 7.126726 ACGTTAACTACAGTCTACAGTACAG 57.873 40.000 3.71 0.00 0.00 2.74
1290 4517 3.744426 TCGTTTTTCCTGCTACTGCTAAC 59.256 43.478 0.00 0.00 40.48 2.34
1295 4522 7.572353 CGTTTTTCCTGCTACTGCTAACAATTA 60.572 37.037 0.00 0.00 40.48 1.40
1297 4524 5.677319 TCCTGCTACTGCTAACAATTACT 57.323 39.130 0.00 0.00 40.48 2.24
1299 4526 6.570692 TCCTGCTACTGCTAACAATTACTAC 58.429 40.000 0.00 0.00 40.48 2.73
1302 4529 7.010552 CCTGCTACTGCTAACAATTACTACTTG 59.989 40.741 0.00 0.00 40.48 3.16
1541 4827 3.680196 ACCTACTCCGCCTGGGGA 61.680 66.667 12.98 7.97 38.40 4.81
2424 5734 1.199859 CGCGTACGTGTGTCAAACC 59.800 57.895 20.36 0.00 33.53 3.27
2443 5753 1.724623 CCAAATGGACACGTACGTCAG 59.275 52.381 19.94 11.26 37.66 3.51
2446 5756 4.855596 GGACACGTACGTCAGTCC 57.144 61.111 30.51 30.51 43.18 3.85
2466 5776 3.119173 TCCAATCAAATTAAGGCCGCAAG 60.119 43.478 0.00 0.00 0.00 4.01
2558 5868 1.285280 AGTGCCTGCTGGGTGTAATA 58.715 50.000 12.06 0.00 37.43 0.98
2559 5869 1.846439 AGTGCCTGCTGGGTGTAATAT 59.154 47.619 12.06 0.00 37.43 1.28
2560 5870 1.949525 GTGCCTGCTGGGTGTAATATG 59.050 52.381 12.06 0.00 37.43 1.78
2561 5871 0.954452 GCCTGCTGGGTGTAATATGC 59.046 55.000 12.06 0.00 37.43 3.14
2586 5900 9.034544 GCATGATTCACAAAAAGAAACTACTTT 57.965 29.630 0.00 0.00 41.09 2.66
2703 6038 7.962964 TGAAGGTGTGTTATAAGAAGTTGAG 57.037 36.000 0.00 0.00 0.00 3.02
2796 6131 7.581213 AAAACATGAGTAGTCAAATGGAACA 57.419 32.000 3.93 0.00 38.77 3.18
2797 6132 7.765695 AAACATGAGTAGTCAAATGGAACAT 57.234 32.000 3.93 0.00 38.98 2.71
2798 6133 6.748333 ACATGAGTAGTCAAATGGAACATG 57.252 37.500 3.93 0.00 38.98 3.21
2799 6134 6.475504 ACATGAGTAGTCAAATGGAACATGA 58.524 36.000 3.93 0.00 38.98 3.07
2800 6135 6.596888 ACATGAGTAGTCAAATGGAACATGAG 59.403 38.462 3.93 0.00 38.98 2.90
2801 6136 6.820152 CATGAGTAGTCAAATGGAACATGAGA 59.180 38.462 3.93 0.00 38.98 3.27
2802 6137 7.335171 CATGAGTAGTCAAATGGAACATGAGAA 59.665 37.037 3.93 0.00 38.98 2.87
2803 6138 7.884877 ATGAGTAGTCAAATGGAACATGAGAAA 59.115 33.333 3.93 0.00 38.98 2.52
2812 6147 5.366482 TGGAACATGAGAAATAATCGGGA 57.634 39.130 0.00 0.00 0.00 5.14
2813 6148 5.940617 TGGAACATGAGAAATAATCGGGAT 58.059 37.500 0.00 0.00 0.00 3.85
2814 6149 5.764686 TGGAACATGAGAAATAATCGGGATG 59.235 40.000 0.00 0.00 0.00 3.51
2815 6150 5.335191 GGAACATGAGAAATAATCGGGATGC 60.335 44.000 0.00 0.00 0.00 3.91
2816 6151 4.717877 ACATGAGAAATAATCGGGATGCA 58.282 39.130 0.00 0.00 0.00 3.96
2817 6152 4.758674 ACATGAGAAATAATCGGGATGCAG 59.241 41.667 0.00 0.00 0.00 4.41
2818 6153 4.422073 TGAGAAATAATCGGGATGCAGT 57.578 40.909 0.00 0.00 0.00 4.40
2819 6154 4.380531 TGAGAAATAATCGGGATGCAGTC 58.619 43.478 0.00 0.00 0.00 3.51
2820 6155 4.141733 TGAGAAATAATCGGGATGCAGTCA 60.142 41.667 0.00 0.00 0.00 3.41
2821 6156 4.130118 AGAAATAATCGGGATGCAGTCAC 58.870 43.478 0.00 0.00 0.00 3.67
2822 6157 2.550830 ATAATCGGGATGCAGTCACC 57.449 50.000 0.00 0.00 0.00 4.02
2823 6158 1.496060 TAATCGGGATGCAGTCACCT 58.504 50.000 0.00 0.00 0.00 4.00
2824 6159 0.620556 AATCGGGATGCAGTCACCTT 59.379 50.000 0.00 0.00 0.00 3.50
2825 6160 0.620556 ATCGGGATGCAGTCACCTTT 59.379 50.000 0.00 0.00 0.00 3.11
2826 6161 0.400213 TCGGGATGCAGTCACCTTTT 59.600 50.000 0.00 0.00 0.00 2.27
2827 6162 1.202879 TCGGGATGCAGTCACCTTTTT 60.203 47.619 0.00 0.00 0.00 1.94
2859 6194 3.786553 TGGATACAGTCACTTGGTACCT 58.213 45.455 14.36 0.00 46.17 3.08
2860 6195 4.164981 TGGATACAGTCACTTGGTACCTT 58.835 43.478 14.36 0.00 46.17 3.50
2861 6196 4.222145 TGGATACAGTCACTTGGTACCTTC 59.778 45.833 14.36 0.00 46.17 3.46
2862 6197 4.382793 GGATACAGTCACTTGGTACCTTCC 60.383 50.000 14.36 0.00 0.00 3.46
2863 6198 2.690840 ACAGTCACTTGGTACCTTCCT 58.309 47.619 14.36 0.00 0.00 3.36
2864 6199 2.368875 ACAGTCACTTGGTACCTTCCTG 59.631 50.000 14.36 12.09 0.00 3.86
2865 6200 2.368875 CAGTCACTTGGTACCTTCCTGT 59.631 50.000 14.36 1.97 0.00 4.00
2866 6201 3.046374 AGTCACTTGGTACCTTCCTGTT 58.954 45.455 14.36 0.00 0.00 3.16
2867 6202 3.458487 AGTCACTTGGTACCTTCCTGTTT 59.542 43.478 14.36 0.00 0.00 2.83
2868 6203 4.079958 AGTCACTTGGTACCTTCCTGTTTT 60.080 41.667 14.36 0.00 0.00 2.43
2869 6204 4.036380 GTCACTTGGTACCTTCCTGTTTTG 59.964 45.833 14.36 0.00 0.00 2.44
2870 6205 3.951680 CACTTGGTACCTTCCTGTTTTGT 59.048 43.478 14.36 0.00 0.00 2.83
2871 6206 4.036380 CACTTGGTACCTTCCTGTTTTGTC 59.964 45.833 14.36 0.00 0.00 3.18
2872 6207 3.217681 TGGTACCTTCCTGTTTTGTCC 57.782 47.619 14.36 0.00 0.00 4.02
2873 6208 2.148768 GGTACCTTCCTGTTTTGTCCG 58.851 52.381 4.06 0.00 0.00 4.79
2874 6209 2.486013 GGTACCTTCCTGTTTTGTCCGT 60.486 50.000 4.06 0.00 0.00 4.69
2875 6210 1.963172 ACCTTCCTGTTTTGTCCGTC 58.037 50.000 0.00 0.00 0.00 4.79
2876 6211 1.210967 ACCTTCCTGTTTTGTCCGTCA 59.789 47.619 0.00 0.00 0.00 4.35
2877 6212 1.602377 CCTTCCTGTTTTGTCCGTCAC 59.398 52.381 0.00 0.00 0.00 3.67
2878 6213 1.602377 CTTCCTGTTTTGTCCGTCACC 59.398 52.381 0.00 0.00 0.00 4.02
2879 6214 0.542333 TCCTGTTTTGTCCGTCACCA 59.458 50.000 0.00 0.00 0.00 4.17
2880 6215 1.065345 TCCTGTTTTGTCCGTCACCAA 60.065 47.619 0.00 0.00 0.00 3.67
2881 6216 1.333619 CCTGTTTTGTCCGTCACCAAG 59.666 52.381 0.00 0.00 0.00 3.61
2882 6217 1.333619 CTGTTTTGTCCGTCACCAAGG 59.666 52.381 0.00 0.00 0.00 3.61
2883 6218 1.340211 TGTTTTGTCCGTCACCAAGGT 60.340 47.619 0.00 0.00 0.00 3.50
2884 6219 1.746787 GTTTTGTCCGTCACCAAGGTT 59.253 47.619 0.00 0.00 0.00 3.50
2885 6220 2.131776 TTTGTCCGTCACCAAGGTTT 57.868 45.000 0.00 0.00 0.00 3.27
2886 6221 2.131776 TTGTCCGTCACCAAGGTTTT 57.868 45.000 0.00 0.00 0.00 2.43
2887 6222 1.670791 TGTCCGTCACCAAGGTTTTC 58.329 50.000 0.00 0.00 0.00 2.29
2888 6223 1.210967 TGTCCGTCACCAAGGTTTTCT 59.789 47.619 0.00 0.00 0.00 2.52
2889 6224 2.435069 TGTCCGTCACCAAGGTTTTCTA 59.565 45.455 0.00 0.00 0.00 2.10
2890 6225 2.804527 GTCCGTCACCAAGGTTTTCTAC 59.195 50.000 0.00 0.00 0.00 2.59
2903 6238 5.541953 GGTTTTCTACCTACCGGATACAT 57.458 43.478 9.46 0.00 44.10 2.29
2904 6239 6.655078 GGTTTTCTACCTACCGGATACATA 57.345 41.667 9.46 0.00 44.10 2.29
2905 6240 6.685657 GGTTTTCTACCTACCGGATACATAG 58.314 44.000 9.46 0.00 44.10 2.23
2906 6241 6.491403 GGTTTTCTACCTACCGGATACATAGA 59.509 42.308 9.46 5.79 44.10 1.98
2907 6242 7.014615 GGTTTTCTACCTACCGGATACATAGAA 59.985 40.741 9.46 11.68 44.10 2.10
2908 6243 8.416329 GTTTTCTACCTACCGGATACATAGAAA 58.584 37.037 9.46 16.62 34.06 2.52
2909 6244 7.756395 TTCTACCTACCGGATACATAGAAAG 57.244 40.000 9.46 0.10 0.00 2.62
2910 6245 6.845908 TCTACCTACCGGATACATAGAAAGT 58.154 40.000 9.46 0.00 0.00 2.66
2911 6246 7.977818 TCTACCTACCGGATACATAGAAAGTA 58.022 38.462 9.46 0.00 0.00 2.24
2912 6247 8.609483 TCTACCTACCGGATACATAGAAAGTAT 58.391 37.037 9.46 0.00 35.01 2.12
2913 6248 9.240734 CTACCTACCGGATACATAGAAAGTATT 57.759 37.037 9.46 0.00 32.60 1.89
2915 6250 9.765295 ACCTACCGGATACATAGAAAGTATTAT 57.235 33.333 9.46 0.00 32.60 1.28
2918 6253 7.848128 ACCGGATACATAGAAAGTATTATGGG 58.152 38.462 9.46 0.00 32.60 4.00
2919 6254 7.093024 ACCGGATACATAGAAAGTATTATGGGG 60.093 40.741 9.46 0.00 32.60 4.96
2920 6255 6.761714 CGGATACATAGAAAGTATTATGGGGC 59.238 42.308 0.00 0.00 32.60 5.80
2921 6256 7.364762 CGGATACATAGAAAGTATTATGGGGCT 60.365 40.741 0.00 0.00 32.60 5.19
2922 6257 7.988028 GGATACATAGAAAGTATTATGGGGCTC 59.012 40.741 0.00 0.00 32.60 4.70
2923 6258 8.686739 ATACATAGAAAGTATTATGGGGCTCT 57.313 34.615 0.00 0.00 32.76 4.09
2924 6259 6.773638 ACATAGAAAGTATTATGGGGCTCTG 58.226 40.000 0.00 0.00 32.76 3.35
2925 6260 6.558775 ACATAGAAAGTATTATGGGGCTCTGA 59.441 38.462 0.00 0.00 32.76 3.27
2926 6261 7.238514 ACATAGAAAGTATTATGGGGCTCTGAT 59.761 37.037 0.00 0.00 32.76 2.90
2927 6262 8.762645 CATAGAAAGTATTATGGGGCTCTGATA 58.237 37.037 0.00 0.00 0.00 2.15
2928 6263 7.251321 AGAAAGTATTATGGGGCTCTGATAG 57.749 40.000 0.00 0.00 0.00 2.08
2929 6264 7.019388 AGAAAGTATTATGGGGCTCTGATAGA 58.981 38.462 0.00 0.00 0.00 1.98
2930 6265 7.514127 AGAAAGTATTATGGGGCTCTGATAGAA 59.486 37.037 0.00 0.00 0.00 2.10
2931 6266 6.613153 AGTATTATGGGGCTCTGATAGAAC 57.387 41.667 0.00 0.00 0.00 3.01
2932 6267 4.917906 ATTATGGGGCTCTGATAGAACC 57.082 45.455 0.00 0.00 29.70 3.62
2935 6270 1.749033 GGGCTCTGATAGAACCCCG 59.251 63.158 6.10 0.00 43.37 5.73
2936 6271 1.749033 GGCTCTGATAGAACCCCGG 59.251 63.158 0.00 0.00 0.00 5.73
2937 6272 0.759436 GGCTCTGATAGAACCCCGGA 60.759 60.000 0.73 0.00 0.00 5.14
2938 6273 0.676736 GCTCTGATAGAACCCCGGAG 59.323 60.000 0.73 0.00 36.62 4.63
2939 6274 2.030045 GCTCTGATAGAACCCCGGAGT 61.030 57.143 0.73 0.00 36.10 3.85
2940 6275 2.389715 CTCTGATAGAACCCCGGAGTT 58.610 52.381 0.00 0.00 0.00 3.01
2941 6276 2.101582 CTCTGATAGAACCCCGGAGTTG 59.898 54.545 5.89 0.00 0.00 3.16
2942 6277 1.831736 CTGATAGAACCCCGGAGTTGT 59.168 52.381 5.89 4.54 0.00 3.32
2943 6278 1.829222 TGATAGAACCCCGGAGTTGTC 59.171 52.381 5.89 2.34 0.00 3.18
2944 6279 2.108970 GATAGAACCCCGGAGTTGTCT 58.891 52.381 5.89 0.00 0.00 3.41
2945 6280 2.905415 TAGAACCCCGGAGTTGTCTA 57.095 50.000 5.89 0.00 0.00 2.59
2946 6281 2.019807 AGAACCCCGGAGTTGTCTAA 57.980 50.000 5.89 0.00 0.00 2.10
2947 6282 2.547990 AGAACCCCGGAGTTGTCTAAT 58.452 47.619 5.89 0.00 0.00 1.73
2948 6283 2.500504 AGAACCCCGGAGTTGTCTAATC 59.499 50.000 5.89 0.00 0.00 1.75
2949 6284 1.201424 ACCCCGGAGTTGTCTAATCC 58.799 55.000 0.73 0.00 0.00 3.01
2950 6285 1.200519 CCCCGGAGTTGTCTAATCCA 58.799 55.000 0.73 0.00 32.31 3.41
2951 6286 1.768870 CCCCGGAGTTGTCTAATCCAT 59.231 52.381 0.73 0.00 32.31 3.41
2952 6287 2.485479 CCCCGGAGTTGTCTAATCCATG 60.485 54.545 0.73 0.00 32.31 3.66
2953 6288 2.170607 CCCGGAGTTGTCTAATCCATGT 59.829 50.000 0.73 0.00 32.31 3.21
2954 6289 3.386726 CCCGGAGTTGTCTAATCCATGTA 59.613 47.826 0.73 0.00 32.31 2.29
2955 6290 4.369182 CCGGAGTTGTCTAATCCATGTAC 58.631 47.826 0.00 0.00 32.31 2.90
2956 6291 4.142026 CCGGAGTTGTCTAATCCATGTACA 60.142 45.833 0.00 0.00 32.31 2.90
2957 6292 5.416083 CGGAGTTGTCTAATCCATGTACAA 58.584 41.667 0.00 0.00 32.31 2.41
2958 6293 5.520288 CGGAGTTGTCTAATCCATGTACAAG 59.480 44.000 0.00 0.00 31.19 3.16
2959 6294 6.407202 GGAGTTGTCTAATCCATGTACAAGT 58.593 40.000 0.00 0.00 36.64 3.16
2960 6295 6.879458 GGAGTTGTCTAATCCATGTACAAGTT 59.121 38.462 0.00 0.00 34.68 2.66
2961 6296 7.064728 GGAGTTGTCTAATCCATGTACAAGTTC 59.935 40.741 0.00 0.00 34.68 3.01
2962 6297 7.450074 AGTTGTCTAATCCATGTACAAGTTCA 58.550 34.615 0.00 0.00 31.40 3.18
2963 6298 7.936847 AGTTGTCTAATCCATGTACAAGTTCAA 59.063 33.333 0.00 0.40 31.40 2.69
2964 6299 7.667043 TGTCTAATCCATGTACAAGTTCAAC 57.333 36.000 0.00 0.00 0.00 3.18
2965 6300 7.220740 TGTCTAATCCATGTACAAGTTCAACA 58.779 34.615 0.00 0.00 0.00 3.33
2966 6301 7.717436 TGTCTAATCCATGTACAAGTTCAACAA 59.283 33.333 0.00 0.00 0.00 2.83
2967 6302 8.564574 GTCTAATCCATGTACAAGTTCAACAAA 58.435 33.333 0.00 0.00 0.00 2.83
2968 6303 9.126151 TCTAATCCATGTACAAGTTCAACAAAA 57.874 29.630 0.00 0.00 0.00 2.44
2969 6304 9.180678 CTAATCCATGTACAAGTTCAACAAAAC 57.819 33.333 0.00 0.00 0.00 2.43
2970 6305 6.516739 TCCATGTACAAGTTCAACAAAACA 57.483 33.333 0.00 0.00 0.00 2.83
2971 6306 7.106439 TCCATGTACAAGTTCAACAAAACAT 57.894 32.000 0.00 0.00 0.00 2.71
2972 6307 8.226819 TCCATGTACAAGTTCAACAAAACATA 57.773 30.769 0.00 0.00 0.00 2.29
2973 6308 8.349245 TCCATGTACAAGTTCAACAAAACATAG 58.651 33.333 0.00 0.00 0.00 2.23
2974 6309 7.114811 CCATGTACAAGTTCAACAAAACATAGC 59.885 37.037 0.00 0.00 0.00 2.97
2975 6310 7.089770 TGTACAAGTTCAACAAAACATAGCA 57.910 32.000 0.00 0.00 0.00 3.49
2976 6311 6.970043 TGTACAAGTTCAACAAAACATAGCAC 59.030 34.615 0.00 0.00 0.00 4.40
2977 6312 5.348164 ACAAGTTCAACAAAACATAGCACC 58.652 37.500 0.00 0.00 0.00 5.01
2978 6313 5.127031 ACAAGTTCAACAAAACATAGCACCT 59.873 36.000 0.00 0.00 0.00 4.00
2979 6314 5.438761 AGTTCAACAAAACATAGCACCTC 57.561 39.130 0.00 0.00 0.00 3.85
2980 6315 4.024048 AGTTCAACAAAACATAGCACCTCG 60.024 41.667 0.00 0.00 0.00 4.63
2981 6316 2.225491 TCAACAAAACATAGCACCTCGC 59.775 45.455 0.00 0.00 42.91 5.03
2982 6317 1.890876 ACAAAACATAGCACCTCGCA 58.109 45.000 0.00 0.00 46.13 5.10
2983 6318 1.535462 ACAAAACATAGCACCTCGCAC 59.465 47.619 0.00 0.00 46.13 5.34
2984 6319 1.135689 CAAAACATAGCACCTCGCACC 60.136 52.381 0.00 0.00 46.13 5.01
2985 6320 0.676782 AAACATAGCACCTCGCACCC 60.677 55.000 0.00 0.00 46.13 4.61
2986 6321 1.836999 AACATAGCACCTCGCACCCA 61.837 55.000 0.00 0.00 46.13 4.51
2987 6322 1.078497 CATAGCACCTCGCACCCAA 60.078 57.895 0.00 0.00 46.13 4.12
2988 6323 0.676466 CATAGCACCTCGCACCCAAA 60.676 55.000 0.00 0.00 46.13 3.28
2989 6324 0.037590 ATAGCACCTCGCACCCAAAA 59.962 50.000 0.00 0.00 46.13 2.44
2990 6325 0.887387 TAGCACCTCGCACCCAAAAC 60.887 55.000 0.00 0.00 46.13 2.43
2991 6326 2.637025 CACCTCGCACCCAAAACG 59.363 61.111 0.00 0.00 0.00 3.60
2992 6327 1.890041 CACCTCGCACCCAAAACGA 60.890 57.895 0.00 0.00 0.00 3.85
2995 6330 2.975799 TCGCACCCAAAACGAGGC 60.976 61.111 0.00 0.00 0.00 4.70
2996 6331 3.283684 CGCACCCAAAACGAGGCA 61.284 61.111 0.00 0.00 0.00 4.75
2997 6332 2.840066 CGCACCCAAAACGAGGCAA 61.840 57.895 0.00 0.00 0.00 4.52
2998 6333 1.439644 GCACCCAAAACGAGGCAAA 59.560 52.632 0.00 0.00 0.00 3.68
2999 6334 0.597377 GCACCCAAAACGAGGCAAAG 60.597 55.000 0.00 0.00 0.00 2.77
3000 6335 1.028905 CACCCAAAACGAGGCAAAGA 58.971 50.000 0.00 0.00 0.00 2.52
3001 6336 1.407258 CACCCAAAACGAGGCAAAGAA 59.593 47.619 0.00 0.00 0.00 2.52
3002 6337 2.104170 ACCCAAAACGAGGCAAAGAAA 58.896 42.857 0.00 0.00 0.00 2.52
3003 6338 2.498078 ACCCAAAACGAGGCAAAGAAAA 59.502 40.909 0.00 0.00 0.00 2.29
3004 6339 3.133901 ACCCAAAACGAGGCAAAGAAAAT 59.866 39.130 0.00 0.00 0.00 1.82
3005 6340 4.342665 ACCCAAAACGAGGCAAAGAAAATA 59.657 37.500 0.00 0.00 0.00 1.40
3006 6341 5.163395 ACCCAAAACGAGGCAAAGAAAATAA 60.163 36.000 0.00 0.00 0.00 1.40
3007 6342 5.931724 CCCAAAACGAGGCAAAGAAAATAAT 59.068 36.000 0.00 0.00 0.00 1.28
3008 6343 7.093992 CCCAAAACGAGGCAAAGAAAATAATA 58.906 34.615 0.00 0.00 0.00 0.98
3009 6344 7.275560 CCCAAAACGAGGCAAAGAAAATAATAG 59.724 37.037 0.00 0.00 0.00 1.73
3010 6345 7.812669 CCAAAACGAGGCAAAGAAAATAATAGT 59.187 33.333 0.00 0.00 0.00 2.12
3011 6346 9.834628 CAAAACGAGGCAAAGAAAATAATAGTA 57.165 29.630 0.00 0.00 0.00 1.82
3015 6350 9.391006 ACGAGGCAAAGAAAATAATAGTAATCA 57.609 29.630 0.00 0.00 0.00 2.57
3035 6370 9.832445 GTAATCATCAAGATAGAAAACTACCCA 57.168 33.333 0.00 0.00 35.39 4.51
3039 6374 9.213777 TCATCAAGATAGAAAACTACCCATAGT 57.786 33.333 0.00 0.00 43.91 2.12
3040 6375 9.265901 CATCAAGATAGAAAACTACCCATAGTG 57.734 37.037 0.00 0.00 41.00 2.74
3041 6376 8.603898 TCAAGATAGAAAACTACCCATAGTGA 57.396 34.615 0.00 0.00 41.00 3.41
3042 6377 9.042450 TCAAGATAGAAAACTACCCATAGTGAA 57.958 33.333 0.00 0.00 41.00 3.18
3043 6378 9.838339 CAAGATAGAAAACTACCCATAGTGAAT 57.162 33.333 0.00 0.00 41.00 2.57
3048 6383 8.840200 AGAAAACTACCCATAGTGAATAGAGA 57.160 34.615 0.00 0.00 41.00 3.10
3049 6384 9.268282 AGAAAACTACCCATAGTGAATAGAGAA 57.732 33.333 0.00 0.00 41.00 2.87
3050 6385 9.886132 GAAAACTACCCATAGTGAATAGAGAAA 57.114 33.333 0.00 0.00 41.00 2.52
3079 6414 9.751542 AAGTACTTTCTCCGATTCATAATACTG 57.248 33.333 1.12 0.00 0.00 2.74
3080 6415 8.915036 AGTACTTTCTCCGATTCATAATACTGT 58.085 33.333 0.00 0.00 0.00 3.55
3081 6416 9.530633 GTACTTTCTCCGATTCATAATACTGTT 57.469 33.333 0.00 0.00 0.00 3.16
3082 6417 8.425577 ACTTTCTCCGATTCATAATACTGTTG 57.574 34.615 0.00 0.00 0.00 3.33
3083 6418 6.844696 TTCTCCGATTCATAATACTGTTGC 57.155 37.500 0.00 0.00 0.00 4.17
3084 6419 6.161855 TCTCCGATTCATAATACTGTTGCT 57.838 37.500 0.00 0.00 0.00 3.91
3085 6420 6.216569 TCTCCGATTCATAATACTGTTGCTC 58.783 40.000 0.00 0.00 0.00 4.26
3086 6421 5.912892 TCCGATTCATAATACTGTTGCTCA 58.087 37.500 0.00 0.00 0.00 4.26
3087 6422 6.345298 TCCGATTCATAATACTGTTGCTCAA 58.655 36.000 0.00 0.00 0.00 3.02
3088 6423 6.821160 TCCGATTCATAATACTGTTGCTCAAA 59.179 34.615 0.00 0.00 0.00 2.69
3089 6424 7.498900 TCCGATTCATAATACTGTTGCTCAAAT 59.501 33.333 0.00 0.00 0.00 2.32
3090 6425 8.773645 CCGATTCATAATACTGTTGCTCAAATA 58.226 33.333 0.00 0.00 0.00 1.40
3091 6426 9.803130 CGATTCATAATACTGTTGCTCAAATAG 57.197 33.333 0.00 0.00 33.42 1.73
3095 6430 9.836864 TCATAATACTGTTGCTCAAATAGATGT 57.163 29.630 0.00 0.00 31.72 3.06
3102 6437 9.890629 ACTGTTGCTCAAATAGATGTATCTAAA 57.109 29.630 5.75 0.00 42.20 1.85
3137 6472 9.640963 ATTGTTAGATATATCCGTCTAAGCAAC 57.359 33.333 9.18 1.90 37.55 4.17
3138 6473 8.173542 TGTTAGATATATCCGTCTAAGCAACA 57.826 34.615 9.18 4.04 37.55 3.33
3139 6474 8.635328 TGTTAGATATATCCGTCTAAGCAACAA 58.365 33.333 9.18 0.00 37.55 2.83
3140 6475 9.472361 GTTAGATATATCCGTCTAAGCAACAAA 57.528 33.333 9.18 0.00 37.55 2.83
3173 6508 7.749377 AATATAGATCGAATGGGGGTATGAA 57.251 36.000 0.00 0.00 0.00 2.57
3174 6509 7.937700 ATATAGATCGAATGGGGGTATGAAT 57.062 36.000 0.00 0.00 0.00 2.57
3175 6510 4.559862 AGATCGAATGGGGGTATGAATC 57.440 45.455 0.00 0.00 0.00 2.52
3176 6511 3.909995 AGATCGAATGGGGGTATGAATCA 59.090 43.478 0.00 0.00 0.00 2.57
3177 6512 4.350816 AGATCGAATGGGGGTATGAATCAA 59.649 41.667 0.00 0.00 0.00 2.57
3178 6513 4.722526 TCGAATGGGGGTATGAATCAAT 57.277 40.909 0.00 0.00 0.00 2.57
3179 6514 4.651778 TCGAATGGGGGTATGAATCAATC 58.348 43.478 0.00 0.00 0.00 2.67
3180 6515 3.436704 CGAATGGGGGTATGAATCAATCG 59.563 47.826 0.00 0.00 0.00 3.34
3181 6516 2.949177 TGGGGGTATGAATCAATCGG 57.051 50.000 0.00 0.00 0.00 4.18
3182 6517 2.413601 TGGGGGTATGAATCAATCGGA 58.586 47.619 0.00 0.00 0.00 4.55
3183 6518 2.986019 TGGGGGTATGAATCAATCGGAT 59.014 45.455 0.00 0.00 38.05 4.18
3184 6519 3.009033 TGGGGGTATGAATCAATCGGATC 59.991 47.826 0.00 0.00 34.28 3.36
3185 6520 3.262420 GGGGTATGAATCAATCGGATCG 58.738 50.000 0.00 0.00 34.28 3.69
3186 6521 3.262420 GGGTATGAATCAATCGGATCGG 58.738 50.000 0.00 0.00 34.28 4.18
3187 6522 2.673368 GGTATGAATCAATCGGATCGGC 59.327 50.000 0.00 0.00 34.28 5.54
3188 6523 1.432514 ATGAATCAATCGGATCGGCG 58.567 50.000 0.00 0.00 34.28 6.46
3189 6524 0.104120 TGAATCAATCGGATCGGCGT 59.896 50.000 6.85 0.00 34.28 5.68
3190 6525 1.217882 GAATCAATCGGATCGGCGTT 58.782 50.000 6.85 0.00 34.28 4.84
3191 6526 0.937304 AATCAATCGGATCGGCGTTG 59.063 50.000 6.85 2.73 34.28 4.10
3192 6527 0.880278 ATCAATCGGATCGGCGTTGG 60.880 55.000 6.85 0.00 0.00 3.77
3193 6528 1.813753 CAATCGGATCGGCGTTGGT 60.814 57.895 6.85 0.00 0.00 3.67
3194 6529 0.528901 CAATCGGATCGGCGTTGGTA 60.529 55.000 6.85 0.00 0.00 3.25
3195 6530 0.176219 AATCGGATCGGCGTTGGTAA 59.824 50.000 6.85 0.00 0.00 2.85
3196 6531 0.391597 ATCGGATCGGCGTTGGTAAT 59.608 50.000 6.85 0.00 0.00 1.89
3197 6532 0.176219 TCGGATCGGCGTTGGTAATT 59.824 50.000 6.85 0.00 0.00 1.40
3198 6533 0.303493 CGGATCGGCGTTGGTAATTG 59.697 55.000 6.85 0.00 0.00 2.32
3199 6534 0.028902 GGATCGGCGTTGGTAATTGC 59.971 55.000 6.85 0.00 0.00 3.56
3200 6535 1.014352 GATCGGCGTTGGTAATTGCT 58.986 50.000 6.85 0.00 0.00 3.91
3201 6536 0.732571 ATCGGCGTTGGTAATTGCTG 59.267 50.000 6.85 0.00 35.04 4.41
3202 6537 0.320858 TCGGCGTTGGTAATTGCTGA 60.321 50.000 6.85 0.00 40.23 4.26
3203 6538 0.732571 CGGCGTTGGTAATTGCTGAT 59.267 50.000 0.00 0.00 35.76 2.90
3204 6539 1.268032 CGGCGTTGGTAATTGCTGATC 60.268 52.381 0.00 0.00 35.76 2.92
3205 6540 1.742831 GGCGTTGGTAATTGCTGATCA 59.257 47.619 0.00 0.00 0.00 2.92
3206 6541 2.223340 GGCGTTGGTAATTGCTGATCAG 60.223 50.000 18.84 18.84 0.00 2.90
3207 6542 2.223340 GCGTTGGTAATTGCTGATCAGG 60.223 50.000 23.89 6.34 0.00 3.86
3208 6543 3.009723 CGTTGGTAATTGCTGATCAGGT 58.990 45.455 23.89 0.00 0.00 4.00
3209 6544 3.181507 CGTTGGTAATTGCTGATCAGGTG 60.182 47.826 23.89 0.02 0.00 4.00
3210 6545 2.368439 TGGTAATTGCTGATCAGGTGC 58.632 47.619 23.89 11.48 0.00 5.01
3211 6546 2.025981 TGGTAATTGCTGATCAGGTGCT 60.026 45.455 23.89 0.00 0.00 4.40
3212 6547 2.615912 GGTAATTGCTGATCAGGTGCTC 59.384 50.000 23.89 7.54 0.00 4.26
3213 6548 1.376543 AATTGCTGATCAGGTGCTCG 58.623 50.000 23.89 0.00 0.00 5.03
3214 6549 0.463295 ATTGCTGATCAGGTGCTCGG 60.463 55.000 23.89 0.00 0.00 4.63
3215 6550 2.894387 GCTGATCAGGTGCTCGGC 60.894 66.667 23.89 4.18 35.73 5.54
3216 6551 2.584418 CTGATCAGGTGCTCGGCG 60.584 66.667 15.38 0.00 0.00 6.46
3217 6552 3.362399 CTGATCAGGTGCTCGGCGT 62.362 63.158 15.38 0.00 0.00 5.68
3218 6553 2.887568 GATCAGGTGCTCGGCGTG 60.888 66.667 6.85 5.49 0.00 5.34
3219 6554 4.457496 ATCAGGTGCTCGGCGTGG 62.457 66.667 6.85 2.22 0.00 4.94
3233 6568 1.567504 GCGTGGTGCGTGAATATAGT 58.432 50.000 0.00 0.00 43.66 2.12
3234 6569 1.931172 GCGTGGTGCGTGAATATAGTT 59.069 47.619 0.00 0.00 43.66 2.24
3235 6570 2.350498 GCGTGGTGCGTGAATATAGTTT 59.650 45.455 0.00 0.00 43.66 2.66
3236 6571 3.784199 GCGTGGTGCGTGAATATAGTTTG 60.784 47.826 0.00 0.00 43.66 2.93
3237 6572 3.680789 GTGGTGCGTGAATATAGTTTGC 58.319 45.455 0.00 0.00 0.00 3.68
3238 6573 2.680841 TGGTGCGTGAATATAGTTTGCC 59.319 45.455 0.00 0.00 0.00 4.52
3239 6574 2.286184 GGTGCGTGAATATAGTTTGCCG 60.286 50.000 0.00 0.00 0.00 5.69
3240 6575 1.937223 TGCGTGAATATAGTTTGCCGG 59.063 47.619 0.00 0.00 0.00 6.13
3241 6576 1.333791 GCGTGAATATAGTTTGCCGGC 60.334 52.381 22.73 22.73 0.00 6.13
3242 6577 1.263217 CGTGAATATAGTTTGCCGGCC 59.737 52.381 26.77 8.84 0.00 6.13
3243 6578 1.263217 GTGAATATAGTTTGCCGGCCG 59.737 52.381 26.77 21.04 0.00 6.13
3244 6579 0.872388 GAATATAGTTTGCCGGCCGG 59.128 55.000 40.26 40.26 38.57 6.13
3259 6594 4.410400 CGGAAGGTGGGGGAGCAC 62.410 72.222 0.00 0.00 0.00 4.40
3260 6595 4.410400 GGAAGGTGGGGGAGCACG 62.410 72.222 0.00 0.00 0.00 5.34
3261 6596 3.637273 GAAGGTGGGGGAGCACGT 61.637 66.667 0.00 0.00 0.00 4.49
3262 6597 3.607370 GAAGGTGGGGGAGCACGTC 62.607 68.421 0.00 0.00 0.00 4.34
3263 6598 4.640690 AGGTGGGGGAGCACGTCT 62.641 66.667 0.00 0.00 0.00 4.18
3264 6599 2.682494 GGTGGGGGAGCACGTCTA 60.682 66.667 0.00 0.00 0.00 2.59
3265 6600 2.722201 GGTGGGGGAGCACGTCTAG 61.722 68.421 0.00 0.00 0.00 2.43
3266 6601 3.075005 TGGGGGAGCACGTCTAGC 61.075 66.667 0.00 0.00 0.00 3.42
3267 6602 3.075005 GGGGGAGCACGTCTAGCA 61.075 66.667 0.00 0.00 0.00 3.49
3268 6603 2.184579 GGGGAGCACGTCTAGCAC 59.815 66.667 0.00 0.00 0.00 4.40
3269 6604 2.184579 GGGAGCACGTCTAGCACC 59.815 66.667 4.54 4.54 41.29 5.01
3270 6605 2.352032 GGGAGCACGTCTAGCACCT 61.352 63.158 11.54 0.00 41.66 4.00
3271 6606 1.153745 GGAGCACGTCTAGCACCTG 60.154 63.158 5.72 0.00 39.30 4.00
3272 6607 1.595993 GGAGCACGTCTAGCACCTGA 61.596 60.000 5.72 0.00 39.30 3.86
3273 6608 0.243907 GAGCACGTCTAGCACCTGAA 59.756 55.000 0.00 0.00 0.00 3.02
3274 6609 0.898320 AGCACGTCTAGCACCTGAAT 59.102 50.000 0.00 0.00 0.00 2.57
3275 6610 2.099263 GAGCACGTCTAGCACCTGAATA 59.901 50.000 0.00 0.00 0.00 1.75
3276 6611 2.159226 AGCACGTCTAGCACCTGAATAC 60.159 50.000 0.00 0.00 0.00 1.89
3277 6612 2.810650 CACGTCTAGCACCTGAATACC 58.189 52.381 0.00 0.00 0.00 2.73
3278 6613 1.404391 ACGTCTAGCACCTGAATACCG 59.596 52.381 0.00 0.00 0.00 4.02
3279 6614 1.269102 CGTCTAGCACCTGAATACCGG 60.269 57.143 0.00 0.00 0.00 5.28
3280 6615 0.750850 TCTAGCACCTGAATACCGGC 59.249 55.000 0.00 0.00 0.00 6.13
3281 6616 0.464036 CTAGCACCTGAATACCGGCA 59.536 55.000 0.00 0.00 0.00 5.69
3282 6617 0.464036 TAGCACCTGAATACCGGCAG 59.536 55.000 0.00 0.00 0.00 4.85
3283 6618 1.220749 GCACCTGAATACCGGCAGA 59.779 57.895 0.00 0.00 34.06 4.26
3284 6619 1.090052 GCACCTGAATACCGGCAGAC 61.090 60.000 0.00 0.00 34.06 3.51
3285 6620 0.462047 CACCTGAATACCGGCAGACC 60.462 60.000 0.00 0.00 34.06 3.85
3295 6630 3.365265 GGCAGACCGGCAGTTTGG 61.365 66.667 0.00 0.00 40.76 3.28
3296 6631 3.365265 GCAGACCGGCAGTTTGGG 61.365 66.667 0.00 0.00 31.22 4.12
3297 6632 3.365265 CAGACCGGCAGTTTGGGC 61.365 66.667 0.00 0.00 0.00 5.36
3304 6639 3.435186 GCAGTTTGGGCGAGCCTC 61.435 66.667 14.33 4.95 36.10 4.70
3305 6640 2.747855 CAGTTTGGGCGAGCCTCC 60.748 66.667 14.33 0.00 36.10 4.30
3306 6641 4.394712 AGTTTGGGCGAGCCTCCG 62.395 66.667 14.33 0.00 36.10 4.63
3307 6642 4.699522 GTTTGGGCGAGCCTCCGT 62.700 66.667 14.33 0.00 36.10 4.69
3308 6643 4.388499 TTTGGGCGAGCCTCCGTC 62.388 66.667 14.33 0.00 36.10 4.79
3315 6650 4.803426 GAGCCTCCGTCGCCTGTG 62.803 72.222 0.00 0.00 0.00 3.66
3317 6652 4.803426 GCCTCCGTCGCCTGTGAG 62.803 72.222 0.00 0.00 0.00 3.51
3318 6653 3.062466 CCTCCGTCGCCTGTGAGA 61.062 66.667 0.00 0.00 0.00 3.27
3319 6654 2.179517 CTCCGTCGCCTGTGAGAC 59.820 66.667 0.00 0.00 37.87 3.36
3320 6655 2.282251 TCCGTCGCCTGTGAGACT 60.282 61.111 0.00 0.00 38.95 3.24
3321 6656 2.179517 CCGTCGCCTGTGAGACTC 59.820 66.667 0.00 0.00 38.95 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 0.104672 TTGAGAGACACCCTCCCCAA 60.105 55.000 0.00 0.00 42.97 4.12
26 3070 9.778741 TCCTCGCTAATTCTTTATGACATTAAT 57.221 29.630 0.00 0.00 0.00 1.40
46 3090 1.153349 GATGGGTTGACCTCCTCGC 60.153 63.158 0.00 0.00 41.11 5.03
59 3103 0.238289 GTGTTCGTGCAGTTGATGGG 59.762 55.000 0.00 0.00 0.00 4.00
78 3122 1.428448 TGTCTTTGCATTCGACGGAG 58.572 50.000 0.00 0.00 0.00 4.63
88 3132 1.110442 CCACCCAACTTGTCTTTGCA 58.890 50.000 0.00 0.00 0.00 4.08
89 3133 1.067060 GACCACCCAACTTGTCTTTGC 59.933 52.381 0.00 0.00 0.00 3.68
101 3145 0.850100 AGGAACACATTGACCACCCA 59.150 50.000 0.00 0.00 0.00 4.51
102 3146 2.039879 AGTAGGAACACATTGACCACCC 59.960 50.000 0.00 0.00 0.00 4.61
110 3154 1.610624 CGGGCACAGTAGGAACACATT 60.611 52.381 0.00 0.00 0.00 2.71
132 3176 2.190578 GAAGGCCACCATCCCGAG 59.809 66.667 5.01 0.00 0.00 4.63
146 3190 0.107214 TATCCGCTTGGGCTTGGAAG 60.107 55.000 0.00 0.00 33.09 3.46
191 3235 6.230472 TGATAGTGTTTGTAGTGAAGTGCAT 58.770 36.000 0.00 0.00 0.00 3.96
198 3242 7.090808 GTCACAGATGATAGTGTTTGTAGTGA 58.909 38.462 0.00 0.00 37.14 3.41
199 3243 6.311445 GGTCACAGATGATAGTGTTTGTAGTG 59.689 42.308 0.00 0.00 37.14 2.74
240 3284 3.171987 GCACTCAGCCATGTCGTG 58.828 61.111 0.00 0.00 37.23 4.35
255 3299 5.969423 AGTAAGCATTAGTACCGTTTAGCA 58.031 37.500 0.00 0.00 31.10 3.49
258 3302 5.906073 GGGAGTAAGCATTAGTACCGTTTA 58.094 41.667 0.00 0.00 44.68 2.01
267 3311 5.296151 TGGATGAAGGGAGTAAGCATTAG 57.704 43.478 0.00 0.00 0.00 1.73
417 3461 6.206438 TGACATGCATGTTACACAAAGTATGT 59.794 34.615 31.82 5.94 41.87 2.29
418 3462 6.610456 TGACATGCATGTTACACAAAGTATG 58.390 36.000 31.82 2.35 41.95 2.39
419 3463 6.816134 TGACATGCATGTTACACAAAGTAT 57.184 33.333 31.82 5.52 41.95 2.12
420 3464 6.816134 ATGACATGCATGTTACACAAAGTA 57.184 33.333 31.82 9.90 41.95 2.24
421 3465 5.710513 ATGACATGCATGTTACACAAAGT 57.289 34.783 31.82 9.60 41.95 2.66
445 3489 2.963782 ACCACGGGTTAGAGCTATAAGG 59.036 50.000 0.00 1.54 27.29 2.69
446 3490 3.635373 TGACCACGGGTTAGAGCTATAAG 59.365 47.826 0.00 0.00 35.25 1.73
451 3495 1.053424 TTTGACCACGGGTTAGAGCT 58.947 50.000 0.00 0.00 35.25 4.09
462 3506 9.103861 TCCATTTTTGAGTTTATTTTTGACCAC 57.896 29.630 0.00 0.00 0.00 4.16
472 3516 7.433680 GGCCGATATTCCATTTTTGAGTTTAT 58.566 34.615 0.00 0.00 0.00 1.40
480 3524 9.936329 AATATATAGGGCCGATATTCCATTTTT 57.064 29.630 21.92 0.85 0.00 1.94
485 3531 6.183361 CCCAAATATATAGGGCCGATATTCCA 60.183 42.308 21.92 7.18 35.44 3.53
489 3535 7.310634 TCTACCCAAATATATAGGGCCGATAT 58.689 38.462 20.78 20.78 46.88 1.63
493 3539 4.443034 GCTCTACCCAAATATATAGGGCCG 60.443 50.000 18.62 11.98 46.88 6.13
510 3556 1.319541 TAGCCCATCACTCGCTCTAC 58.680 55.000 0.00 0.00 34.03 2.59
516 3562 2.572191 TACGTTTAGCCCATCACTCG 57.428 50.000 0.00 0.00 0.00 4.18
517 3563 3.050619 CGATACGTTTAGCCCATCACTC 58.949 50.000 0.00 0.00 0.00 3.51
532 3594 4.798907 GGACTATGCATGGTTATCGATACG 59.201 45.833 17.50 0.00 0.00 3.06
587 3649 1.667724 GCCAAGAAGGACATGTCATCG 59.332 52.381 26.47 12.34 41.22 3.84
588 3650 2.421424 GTGCCAAGAAGGACATGTCATC 59.579 50.000 26.47 21.91 41.22 2.92
590 3652 1.142667 TGTGCCAAGAAGGACATGTCA 59.857 47.619 26.47 0.93 41.22 3.58
592 3654 1.143684 ACTGTGCCAAGAAGGACATGT 59.856 47.619 0.00 0.00 41.22 3.21
593 3655 1.808945 GACTGTGCCAAGAAGGACATG 59.191 52.381 0.00 0.00 41.22 3.21
595 3657 0.836606 TGACTGTGCCAAGAAGGACA 59.163 50.000 0.00 0.00 41.22 4.02
596 3658 1.876156 CTTGACTGTGCCAAGAAGGAC 59.124 52.381 3.80 0.00 42.57 3.85
597 3659 1.815408 GCTTGACTGTGCCAAGAAGGA 60.815 52.381 12.00 0.00 42.57 3.36
599 3661 1.534595 GAGCTTGACTGTGCCAAGAAG 59.465 52.381 12.00 0.00 42.57 2.85
600 3662 1.141657 AGAGCTTGACTGTGCCAAGAA 59.858 47.619 12.00 0.00 42.57 2.52
601 3663 0.761187 AGAGCTTGACTGTGCCAAGA 59.239 50.000 12.00 0.00 42.57 3.02
602 3664 1.602311 AAGAGCTTGACTGTGCCAAG 58.398 50.000 5.20 5.20 42.77 3.61
603 3665 2.057137 AAAGAGCTTGACTGTGCCAA 57.943 45.000 0.00 0.00 0.00 4.52
604 3666 2.057137 AAAAGAGCTTGACTGTGCCA 57.943 45.000 0.00 0.00 0.00 4.92
605 3667 2.358898 TCAAAAAGAGCTTGACTGTGCC 59.641 45.455 0.00 0.00 0.00 5.01
606 3668 3.698029 TCAAAAAGAGCTTGACTGTGC 57.302 42.857 0.00 0.00 0.00 4.57
607 3669 6.638468 GGTAAATCAAAAAGAGCTTGACTGTG 59.362 38.462 0.00 0.00 35.70 3.66
608 3670 6.321181 TGGTAAATCAAAAAGAGCTTGACTGT 59.679 34.615 0.00 0.00 35.70 3.55
609 3671 6.638468 GTGGTAAATCAAAAAGAGCTTGACTG 59.362 38.462 0.00 0.00 35.70 3.51
610 3672 6.321181 TGTGGTAAATCAAAAAGAGCTTGACT 59.679 34.615 0.00 0.00 35.70 3.41
611 3673 6.503524 TGTGGTAAATCAAAAAGAGCTTGAC 58.496 36.000 0.00 0.00 35.70 3.18
612 3674 6.707440 TGTGGTAAATCAAAAAGAGCTTGA 57.293 33.333 0.00 0.00 37.22 3.02
615 3677 5.068987 TGCTTGTGGTAAATCAAAAAGAGCT 59.931 36.000 0.00 0.00 0.00 4.09
623 3685 6.892658 ACTAATGTGCTTGTGGTAAATCAA 57.107 33.333 0.00 0.00 0.00 2.57
635 3697 3.636300 TGCAAGGTTGAACTAATGTGCTT 59.364 39.130 0.00 0.00 0.00 3.91
640 3702 5.183713 TGGAAGATGCAAGGTTGAACTAATG 59.816 40.000 0.00 0.00 0.00 1.90
644 3706 3.228188 TGGAAGATGCAAGGTTGAACT 57.772 42.857 0.00 0.00 0.00 3.01
678 3740 2.141517 CCTTGCACAGTTGACAGAGAG 58.858 52.381 0.00 0.00 0.00 3.20
679 3741 1.762370 TCCTTGCACAGTTGACAGAGA 59.238 47.619 0.00 0.00 0.00 3.10
711 3773 6.246420 GGATGCAGTAATGTATCCACAATC 57.754 41.667 28.37 6.35 46.14 2.67
722 3784 4.201657 TCTGTTCCATGGATGCAGTAATG 58.798 43.478 30.07 16.15 32.91 1.90
729 3793 4.724074 TGAATTTCTGTTCCATGGATGC 57.276 40.909 17.06 12.37 0.00 3.91
774 3838 1.823041 GCAGCTCCAGGGATGAAGC 60.823 63.158 0.00 0.00 0.00 3.86
780 3844 3.473647 CCGATGCAGCTCCAGGGA 61.474 66.667 0.00 0.00 0.00 4.20
782 3846 2.108566 CTCCGATGCAGCTCCAGG 59.891 66.667 0.00 0.00 0.00 4.45
784 3848 4.166888 GCCTCCGATGCAGCTCCA 62.167 66.667 0.00 0.00 0.00 3.86
785 3849 3.859414 AGCCTCCGATGCAGCTCC 61.859 66.667 0.00 0.00 0.00 4.70
786 3850 2.588314 CAGCCTCCGATGCAGCTC 60.588 66.667 0.00 0.00 31.93 4.09
816 3946 5.568825 GCATTAATTATCGGTCCCTCAGCTA 60.569 44.000 0.00 0.00 0.00 3.32
818 3948 3.437049 GCATTAATTATCGGTCCCTCAGC 59.563 47.826 0.00 0.00 0.00 4.26
847 3977 0.180406 AACTGTCGGTTTGAGTGGCT 59.820 50.000 0.00 0.00 33.90 4.75
884 4014 0.475906 AGACTGCTTCTTTGGCTGGT 59.524 50.000 0.00 0.00 33.87 4.00
901 4031 1.417890 GCTGGGCTCAGGCTTTATAGA 59.582 52.381 17.16 0.00 41.19 1.98
909 4039 1.821332 GTATGTGCTGGGCTCAGGC 60.821 63.158 17.16 8.44 41.19 4.85
967 4097 7.038941 TCTTTCTAAAGTAGGAGCACTAGCTTT 60.039 37.037 0.00 14.21 43.17 3.51
968 4098 6.437793 TCTTTCTAAAGTAGGAGCACTAGCTT 59.562 38.462 0.00 0.00 43.17 3.74
970 4100 6.210287 TCTTTCTAAAGTAGGAGCACTAGC 57.790 41.667 2.58 0.00 37.92 3.42
971 4101 7.136119 CGATCTTTCTAAAGTAGGAGCACTAG 58.864 42.308 2.58 0.00 37.31 2.57
982 4154 3.545703 CCATGGCCGATCTTTCTAAAGT 58.454 45.455 0.00 0.00 37.31 2.66
986 4158 1.801242 TCCCATGGCCGATCTTTCTA 58.199 50.000 6.09 0.00 0.00 2.10
987 4159 0.918983 TTCCCATGGCCGATCTTTCT 59.081 50.000 6.09 0.00 0.00 2.52
1227 4414 9.178427 CAAACTGTACTGTAGACTGTAGTTAAC 57.822 37.037 5.76 0.00 31.12 2.01
1228 4415 7.864379 GCAAACTGTACTGTAGACTGTAGTTAA 59.136 37.037 5.76 0.00 31.12 2.01
1230 4417 6.183360 TGCAAACTGTACTGTAGACTGTAGTT 60.183 38.462 5.76 1.99 31.99 2.24
1236 4423 3.997021 GCATGCAAACTGTACTGTAGACT 59.003 43.478 14.21 0.00 0.00 3.24
1237 4424 3.745975 TGCATGCAAACTGTACTGTAGAC 59.254 43.478 20.30 0.00 0.00 2.59
1290 4517 6.257849 TCGCCTAAATCAGCAAGTAGTAATTG 59.742 38.462 5.98 5.98 0.00 2.32
1295 4522 3.447586 TCTCGCCTAAATCAGCAAGTAGT 59.552 43.478 0.00 0.00 0.00 2.73
1297 4524 4.159693 TCTTCTCGCCTAAATCAGCAAGTA 59.840 41.667 0.00 0.00 0.00 2.24
1299 4526 3.308323 GTCTTCTCGCCTAAATCAGCAAG 59.692 47.826 0.00 0.00 0.00 4.01
1302 4529 1.855360 CGTCTTCTCGCCTAAATCAGC 59.145 52.381 0.00 0.00 0.00 4.26
1463 4749 1.523258 CTCAGAGATGGCCTTGGCG 60.523 63.158 3.32 0.00 0.00 5.69
2019 5305 1.134580 AGACGGAAGATGAGCACCATG 60.135 52.381 0.00 0.00 35.17 3.66
2020 5306 1.137872 GAGACGGAAGATGAGCACCAT 59.862 52.381 0.00 0.00 38.43 3.55
2102 5406 4.194640 CCTTGTCTATGTTGTCCAGGATG 58.805 47.826 0.00 0.00 0.00 3.51
2392 5701 0.435388 TACGCGCACACACAAATACG 59.565 50.000 5.73 0.00 0.00 3.06
2424 5734 2.400399 ACTGACGTACGTGTCCATTTG 58.600 47.619 28.16 8.53 38.11 2.32
2443 5753 2.165437 TGCGGCCTTAATTTGATTGGAC 59.835 45.455 0.00 0.00 0.00 4.02
2446 5756 2.604462 GCTTGCGGCCTTAATTTGATTG 59.396 45.455 0.00 0.00 34.27 2.67
2530 5840 2.368548 CCCAGCAGGCACTACATACATA 59.631 50.000 0.00 0.00 36.02 2.29
2531 5841 1.141657 CCCAGCAGGCACTACATACAT 59.858 52.381 0.00 0.00 36.02 2.29
2532 5842 0.541392 CCCAGCAGGCACTACATACA 59.459 55.000 0.00 0.00 36.02 2.29
2533 5843 0.541863 ACCCAGCAGGCACTACATAC 59.458 55.000 0.00 0.00 40.58 2.39
2558 5868 8.362639 AGTAGTTTCTTTTTGTGAATCATGCAT 58.637 29.630 0.00 0.00 0.00 3.96
2559 5869 7.715657 AGTAGTTTCTTTTTGTGAATCATGCA 58.284 30.769 0.00 0.00 0.00 3.96
2560 5870 8.579682 AAGTAGTTTCTTTTTGTGAATCATGC 57.420 30.769 0.00 0.00 0.00 4.06
2639 5959 8.379457 AGAATTATCTGTCCGCCTTTATAAAC 57.621 34.615 0.00 0.00 33.59 2.01
2645 5965 4.843728 TCAAGAATTATCTGTCCGCCTTT 58.156 39.130 0.00 0.00 35.59 3.11
2698 6033 1.003718 CCGGAGTTGGACCCTCAAC 60.004 63.158 0.00 0.00 45.22 3.18
2699 6034 1.057851 AACCGGAGTTGGACCCTCAA 61.058 55.000 9.46 0.00 33.97 3.02
2703 6038 1.817357 CTTTAACCGGAGTTGGACCC 58.183 55.000 9.46 0.00 36.68 4.46
2776 6111 6.820152 TCTCATGTTCCATTTGACTACTCATG 59.180 38.462 0.00 0.00 33.74 3.07
2777 6112 6.950842 TCTCATGTTCCATTTGACTACTCAT 58.049 36.000 0.00 0.00 0.00 2.90
2778 6113 6.358974 TCTCATGTTCCATTTGACTACTCA 57.641 37.500 0.00 0.00 0.00 3.41
2779 6114 7.672983 TTTCTCATGTTCCATTTGACTACTC 57.327 36.000 0.00 0.00 0.00 2.59
2780 6115 9.739276 TTATTTCTCATGTTCCATTTGACTACT 57.261 29.630 0.00 0.00 0.00 2.57
2783 6118 8.400947 CGATTATTTCTCATGTTCCATTTGACT 58.599 33.333 0.00 0.00 0.00 3.41
2784 6119 7.645340 CCGATTATTTCTCATGTTCCATTTGAC 59.355 37.037 0.00 0.00 0.00 3.18
2785 6120 7.201812 CCCGATTATTTCTCATGTTCCATTTGA 60.202 37.037 0.00 0.00 0.00 2.69
2786 6121 6.919662 CCCGATTATTTCTCATGTTCCATTTG 59.080 38.462 0.00 0.00 0.00 2.32
2787 6122 6.833416 TCCCGATTATTTCTCATGTTCCATTT 59.167 34.615 0.00 0.00 0.00 2.32
2788 6123 6.364701 TCCCGATTATTTCTCATGTTCCATT 58.635 36.000 0.00 0.00 0.00 3.16
2789 6124 5.940617 TCCCGATTATTTCTCATGTTCCAT 58.059 37.500 0.00 0.00 0.00 3.41
2790 6125 5.366482 TCCCGATTATTTCTCATGTTCCA 57.634 39.130 0.00 0.00 0.00 3.53
2791 6126 5.335191 GCATCCCGATTATTTCTCATGTTCC 60.335 44.000 0.00 0.00 0.00 3.62
2792 6127 5.239306 TGCATCCCGATTATTTCTCATGTTC 59.761 40.000 0.00 0.00 0.00 3.18
2793 6128 5.132502 TGCATCCCGATTATTTCTCATGTT 58.867 37.500 0.00 0.00 0.00 2.71
2794 6129 4.717877 TGCATCCCGATTATTTCTCATGT 58.282 39.130 0.00 0.00 0.00 3.21
2795 6130 4.758674 ACTGCATCCCGATTATTTCTCATG 59.241 41.667 0.00 0.00 0.00 3.07
2796 6131 4.978099 ACTGCATCCCGATTATTTCTCAT 58.022 39.130 0.00 0.00 0.00 2.90
2797 6132 4.141733 TGACTGCATCCCGATTATTTCTCA 60.142 41.667 0.00 0.00 0.00 3.27
2798 6133 4.212214 GTGACTGCATCCCGATTATTTCTC 59.788 45.833 0.00 0.00 0.00 2.87
2799 6134 4.130118 GTGACTGCATCCCGATTATTTCT 58.870 43.478 0.00 0.00 0.00 2.52
2800 6135 3.251004 GGTGACTGCATCCCGATTATTTC 59.749 47.826 0.00 0.00 0.00 2.17
2801 6136 3.117888 AGGTGACTGCATCCCGATTATTT 60.118 43.478 0.00 0.00 41.13 1.40
2802 6137 2.439507 AGGTGACTGCATCCCGATTATT 59.560 45.455 0.00 0.00 41.13 1.40
2803 6138 2.050144 AGGTGACTGCATCCCGATTAT 58.950 47.619 0.00 0.00 41.13 1.28
2804 6139 1.496060 AGGTGACTGCATCCCGATTA 58.504 50.000 0.00 0.00 41.13 1.75
2805 6140 0.620556 AAGGTGACTGCATCCCGATT 59.379 50.000 0.00 0.00 42.68 3.34
2806 6141 0.620556 AAAGGTGACTGCATCCCGAT 59.379 50.000 0.00 0.00 42.68 4.18
2807 6142 0.400213 AAAAGGTGACTGCATCCCGA 59.600 50.000 0.00 0.00 42.68 5.14
2808 6143 1.247567 AAAAAGGTGACTGCATCCCG 58.752 50.000 0.00 0.00 42.68 5.14
2829 6164 4.460263 AGTGACTGTATCCACTGCAAAAA 58.540 39.130 0.39 0.00 41.59 1.94
2830 6165 4.085357 AGTGACTGTATCCACTGCAAAA 57.915 40.909 0.39 0.00 41.59 2.44
2831 6166 3.769739 AGTGACTGTATCCACTGCAAA 57.230 42.857 0.39 0.00 41.59 3.68
2832 6167 3.402110 CAAGTGACTGTATCCACTGCAA 58.598 45.455 1.91 0.00 42.25 4.08
2833 6168 2.289631 CCAAGTGACTGTATCCACTGCA 60.290 50.000 1.91 0.00 42.25 4.41
2834 6169 2.289694 ACCAAGTGACTGTATCCACTGC 60.290 50.000 1.91 0.00 42.25 4.40
2835 6170 3.685139 ACCAAGTGACTGTATCCACTG 57.315 47.619 1.91 0.00 42.25 3.66
2836 6171 3.514309 GGTACCAAGTGACTGTATCCACT 59.486 47.826 7.15 0.00 44.69 4.00
2837 6172 3.514309 AGGTACCAAGTGACTGTATCCAC 59.486 47.826 15.94 0.00 0.00 4.02
2838 6173 3.786553 AGGTACCAAGTGACTGTATCCA 58.213 45.455 15.94 0.00 0.00 3.41
2839 6174 4.382793 GGAAGGTACCAAGTGACTGTATCC 60.383 50.000 15.94 0.65 0.00 2.59
2840 6175 4.466726 AGGAAGGTACCAAGTGACTGTATC 59.533 45.833 15.94 0.00 0.00 2.24
2841 6176 4.223032 CAGGAAGGTACCAAGTGACTGTAT 59.777 45.833 15.94 0.00 0.00 2.29
2842 6177 3.576982 CAGGAAGGTACCAAGTGACTGTA 59.423 47.826 15.94 0.00 0.00 2.74
2843 6178 2.368875 CAGGAAGGTACCAAGTGACTGT 59.631 50.000 15.94 0.00 0.00 3.55
2844 6179 2.368875 ACAGGAAGGTACCAAGTGACTG 59.631 50.000 15.94 14.57 0.00 3.51
2845 6180 2.690840 ACAGGAAGGTACCAAGTGACT 58.309 47.619 15.94 0.14 0.00 3.41
2846 6181 3.487120 AACAGGAAGGTACCAAGTGAC 57.513 47.619 15.94 0.00 0.00 3.67
2847 6182 4.204012 CAAAACAGGAAGGTACCAAGTGA 58.796 43.478 15.94 0.00 0.00 3.41
2848 6183 3.951680 ACAAAACAGGAAGGTACCAAGTG 59.048 43.478 15.94 8.27 0.00 3.16
2849 6184 4.204799 GACAAAACAGGAAGGTACCAAGT 58.795 43.478 15.94 0.00 0.00 3.16
2850 6185 3.568430 GGACAAAACAGGAAGGTACCAAG 59.432 47.826 15.94 1.06 0.00 3.61
2851 6186 3.558033 GGACAAAACAGGAAGGTACCAA 58.442 45.455 15.94 0.00 0.00 3.67
2852 6187 2.485835 CGGACAAAACAGGAAGGTACCA 60.486 50.000 15.94 0.00 0.00 3.25
2853 6188 2.148768 CGGACAAAACAGGAAGGTACC 58.851 52.381 2.73 2.73 0.00 3.34
2854 6189 2.804527 GACGGACAAAACAGGAAGGTAC 59.195 50.000 0.00 0.00 0.00 3.34
2855 6190 2.435069 TGACGGACAAAACAGGAAGGTA 59.565 45.455 0.00 0.00 0.00 3.08
2856 6191 1.210967 TGACGGACAAAACAGGAAGGT 59.789 47.619 0.00 0.00 0.00 3.50
2857 6192 1.602377 GTGACGGACAAAACAGGAAGG 59.398 52.381 0.00 0.00 0.00 3.46
2858 6193 1.602377 GGTGACGGACAAAACAGGAAG 59.398 52.381 0.00 0.00 0.00 3.46
2859 6194 1.065345 TGGTGACGGACAAAACAGGAA 60.065 47.619 0.00 0.00 0.00 3.36
2860 6195 0.542333 TGGTGACGGACAAAACAGGA 59.458 50.000 0.00 0.00 0.00 3.86
2861 6196 1.333619 CTTGGTGACGGACAAAACAGG 59.666 52.381 0.00 0.00 0.00 4.00
2862 6197 1.333619 CCTTGGTGACGGACAAAACAG 59.666 52.381 0.00 0.00 0.00 3.16
2863 6198 1.340211 ACCTTGGTGACGGACAAAACA 60.340 47.619 0.00 0.00 0.00 2.83
2864 6199 1.385528 ACCTTGGTGACGGACAAAAC 58.614 50.000 0.00 0.00 0.00 2.43
2865 6200 2.131776 AACCTTGGTGACGGACAAAA 57.868 45.000 0.00 0.00 0.00 2.44
2866 6201 2.131776 AAACCTTGGTGACGGACAAA 57.868 45.000 0.00 0.00 0.00 2.83
2867 6202 2.018515 GAAAACCTTGGTGACGGACAA 58.981 47.619 0.00 0.00 0.00 3.18
2868 6203 1.210967 AGAAAACCTTGGTGACGGACA 59.789 47.619 0.00 0.00 0.00 4.02
2869 6204 1.963172 AGAAAACCTTGGTGACGGAC 58.037 50.000 0.00 0.00 0.00 4.79
2870 6205 2.224354 GGTAGAAAACCTTGGTGACGGA 60.224 50.000 0.00 0.00 45.75 4.69
2871 6206 2.148768 GGTAGAAAACCTTGGTGACGG 58.851 52.381 0.00 0.00 45.75 4.79
2882 6217 7.516198 TCTATGTATCCGGTAGGTAGAAAAC 57.484 40.000 0.00 0.00 39.05 2.43
2883 6218 8.537728 TTTCTATGTATCCGGTAGGTAGAAAA 57.462 34.615 19.40 6.86 39.05 2.29
2884 6219 7.781693 ACTTTCTATGTATCCGGTAGGTAGAAA 59.218 37.037 19.93 19.93 39.05 2.52
2885 6220 7.293073 ACTTTCTATGTATCCGGTAGGTAGAA 58.707 38.462 0.00 7.99 39.05 2.10
2886 6221 6.845908 ACTTTCTATGTATCCGGTAGGTAGA 58.154 40.000 0.00 1.93 39.05 2.59
2887 6222 8.804912 ATACTTTCTATGTATCCGGTAGGTAG 57.195 38.462 0.00 0.00 39.05 3.18
2889 6224 9.765295 ATAATACTTTCTATGTATCCGGTAGGT 57.235 33.333 0.00 0.00 39.05 3.08
2892 6227 8.974238 CCCATAATACTTTCTATGTATCCGGTA 58.026 37.037 0.00 0.00 31.08 4.02
2893 6228 7.093024 CCCCATAATACTTTCTATGTATCCGGT 60.093 40.741 0.00 0.00 31.08 5.28
2894 6229 7.272978 CCCCATAATACTTTCTATGTATCCGG 58.727 42.308 0.00 0.00 31.08 5.14
2895 6230 6.761714 GCCCCATAATACTTTCTATGTATCCG 59.238 42.308 0.00 0.00 31.08 4.18
2896 6231 7.862675 AGCCCCATAATACTTTCTATGTATCC 58.137 38.462 0.00 0.00 31.08 2.59
2897 6232 8.763601 AGAGCCCCATAATACTTTCTATGTATC 58.236 37.037 0.00 0.00 31.08 2.24
2898 6233 8.543774 CAGAGCCCCATAATACTTTCTATGTAT 58.456 37.037 0.00 0.00 32.60 2.29
2899 6234 7.733047 TCAGAGCCCCATAATACTTTCTATGTA 59.267 37.037 0.00 0.00 0.00 2.29
2900 6235 6.558775 TCAGAGCCCCATAATACTTTCTATGT 59.441 38.462 0.00 0.00 0.00 2.29
2901 6236 7.009179 TCAGAGCCCCATAATACTTTCTATG 57.991 40.000 0.00 0.00 0.00 2.23
2902 6237 7.821134 ATCAGAGCCCCATAATACTTTCTAT 57.179 36.000 0.00 0.00 0.00 1.98
2903 6238 8.177456 TCTATCAGAGCCCCATAATACTTTCTA 58.823 37.037 0.00 0.00 0.00 2.10
2904 6239 7.019388 TCTATCAGAGCCCCATAATACTTTCT 58.981 38.462 0.00 0.00 0.00 2.52
2905 6240 7.246171 TCTATCAGAGCCCCATAATACTTTC 57.754 40.000 0.00 0.00 0.00 2.62
2906 6241 7.454225 GTTCTATCAGAGCCCCATAATACTTT 58.546 38.462 0.00 0.00 0.00 2.66
2907 6242 6.013293 GGTTCTATCAGAGCCCCATAATACTT 60.013 42.308 0.00 0.00 39.41 2.24
2908 6243 5.485708 GGTTCTATCAGAGCCCCATAATACT 59.514 44.000 0.00 0.00 39.41 2.12
2909 6244 5.735766 GGTTCTATCAGAGCCCCATAATAC 58.264 45.833 0.00 0.00 39.41 1.89
2911 6246 4.917906 GGTTCTATCAGAGCCCCATAAT 57.082 45.455 0.00 0.00 39.41 1.28
2918 6253 0.759436 TCCGGGGTTCTATCAGAGCC 60.759 60.000 0.00 0.73 43.92 4.70
2919 6254 0.676736 CTCCGGGGTTCTATCAGAGC 59.323 60.000 0.00 0.00 0.00 4.09
2920 6255 2.074729 ACTCCGGGGTTCTATCAGAG 57.925 55.000 0.00 0.00 0.00 3.35
2921 6256 2.108168 CAACTCCGGGGTTCTATCAGA 58.892 52.381 19.32 0.00 0.00 3.27
2922 6257 1.831736 ACAACTCCGGGGTTCTATCAG 59.168 52.381 19.32 7.67 0.00 2.90
2923 6258 1.829222 GACAACTCCGGGGTTCTATCA 59.171 52.381 19.32 0.00 0.00 2.15
2924 6259 2.108970 AGACAACTCCGGGGTTCTATC 58.891 52.381 19.32 15.27 0.00 2.08
2925 6260 2.249309 AGACAACTCCGGGGTTCTAT 57.751 50.000 19.32 5.68 0.00 1.98
2926 6261 2.905415 TAGACAACTCCGGGGTTCTA 57.095 50.000 19.32 14.58 0.00 2.10
2927 6262 2.019807 TTAGACAACTCCGGGGTTCT 57.980 50.000 19.32 15.76 0.00 3.01
2928 6263 2.419713 GGATTAGACAACTCCGGGGTTC 60.420 54.545 19.32 7.53 0.00 3.62
2929 6264 1.558294 GGATTAGACAACTCCGGGGTT 59.442 52.381 15.87 15.87 0.00 4.11
2930 6265 1.201424 GGATTAGACAACTCCGGGGT 58.799 55.000 0.00 0.00 0.00 4.95
2931 6266 1.200519 TGGATTAGACAACTCCGGGG 58.799 55.000 0.00 0.00 31.36 5.73
2932 6267 2.170607 ACATGGATTAGACAACTCCGGG 59.829 50.000 0.00 0.00 31.36 5.73
2933 6268 3.543680 ACATGGATTAGACAACTCCGG 57.456 47.619 0.00 0.00 31.36 5.14
2934 6269 5.006153 TGTACATGGATTAGACAACTCCG 57.994 43.478 0.00 0.00 31.36 4.63
2935 6270 6.407202 ACTTGTACATGGATTAGACAACTCC 58.593 40.000 12.86 0.00 0.00 3.85
2936 6271 7.602644 TGAACTTGTACATGGATTAGACAACTC 59.397 37.037 12.86 0.00 0.00 3.01
2937 6272 7.450074 TGAACTTGTACATGGATTAGACAACT 58.550 34.615 12.86 0.00 0.00 3.16
2938 6273 7.667043 TGAACTTGTACATGGATTAGACAAC 57.333 36.000 12.86 0.00 0.00 3.32
2939 6274 7.717436 TGTTGAACTTGTACATGGATTAGACAA 59.283 33.333 12.86 7.96 0.00 3.18
2940 6275 7.220740 TGTTGAACTTGTACATGGATTAGACA 58.779 34.615 12.86 7.10 0.00 3.41
2941 6276 7.667043 TGTTGAACTTGTACATGGATTAGAC 57.333 36.000 12.86 5.03 0.00 2.59
2942 6277 8.684386 TTTGTTGAACTTGTACATGGATTAGA 57.316 30.769 12.86 0.00 0.00 2.10
2943 6278 9.180678 GTTTTGTTGAACTTGTACATGGATTAG 57.819 33.333 12.86 1.36 0.00 1.73
2944 6279 8.687242 TGTTTTGTTGAACTTGTACATGGATTA 58.313 29.630 12.86 0.00 0.00 1.75
2945 6280 7.551585 TGTTTTGTTGAACTTGTACATGGATT 58.448 30.769 12.86 0.00 0.00 3.01
2946 6281 7.106439 TGTTTTGTTGAACTTGTACATGGAT 57.894 32.000 12.86 1.94 0.00 3.41
2947 6282 6.516739 TGTTTTGTTGAACTTGTACATGGA 57.483 33.333 12.86 0.00 0.00 3.41
2948 6283 7.114811 GCTATGTTTTGTTGAACTTGTACATGG 59.885 37.037 12.86 11.29 0.00 3.66
2949 6284 7.647318 TGCTATGTTTTGTTGAACTTGTACATG 59.353 33.333 7.18 7.18 0.00 3.21
2950 6285 7.647715 GTGCTATGTTTTGTTGAACTTGTACAT 59.352 33.333 0.00 4.42 0.00 2.29
2951 6286 6.970043 GTGCTATGTTTTGTTGAACTTGTACA 59.030 34.615 0.00 0.00 0.00 2.90
2952 6287 6.416750 GGTGCTATGTTTTGTTGAACTTGTAC 59.583 38.462 0.00 0.00 0.00 2.90
2953 6288 6.320164 AGGTGCTATGTTTTGTTGAACTTGTA 59.680 34.615 0.00 0.00 0.00 2.41
2954 6289 5.127031 AGGTGCTATGTTTTGTTGAACTTGT 59.873 36.000 0.00 0.00 0.00 3.16
2955 6290 5.591099 AGGTGCTATGTTTTGTTGAACTTG 58.409 37.500 0.00 0.00 0.00 3.16
2956 6291 5.505654 CGAGGTGCTATGTTTTGTTGAACTT 60.506 40.000 0.00 0.00 0.00 2.66
2957 6292 4.024048 CGAGGTGCTATGTTTTGTTGAACT 60.024 41.667 0.00 0.00 0.00 3.01
2958 6293 4.219033 CGAGGTGCTATGTTTTGTTGAAC 58.781 43.478 0.00 0.00 0.00 3.18
2959 6294 3.304391 GCGAGGTGCTATGTTTTGTTGAA 60.304 43.478 0.00 0.00 41.73 2.69
2960 6295 2.225491 GCGAGGTGCTATGTTTTGTTGA 59.775 45.455 0.00 0.00 41.73 3.18
2961 6296 2.031245 TGCGAGGTGCTATGTTTTGTTG 60.031 45.455 0.00 0.00 46.63 3.33
2962 6297 2.031157 GTGCGAGGTGCTATGTTTTGTT 60.031 45.455 0.00 0.00 46.63 2.83
2963 6298 1.535462 GTGCGAGGTGCTATGTTTTGT 59.465 47.619 0.00 0.00 46.63 2.83
2964 6299 1.135689 GGTGCGAGGTGCTATGTTTTG 60.136 52.381 0.00 0.00 46.63 2.44
2965 6300 1.165270 GGTGCGAGGTGCTATGTTTT 58.835 50.000 0.00 0.00 46.63 2.43
2966 6301 0.676782 GGGTGCGAGGTGCTATGTTT 60.677 55.000 0.00 0.00 46.63 2.83
2967 6302 1.078426 GGGTGCGAGGTGCTATGTT 60.078 57.895 0.00 0.00 46.63 2.71
2968 6303 1.836999 TTGGGTGCGAGGTGCTATGT 61.837 55.000 0.00 0.00 46.63 2.29
2969 6304 0.676466 TTTGGGTGCGAGGTGCTATG 60.676 55.000 0.00 0.00 46.63 2.23
2970 6305 0.037590 TTTTGGGTGCGAGGTGCTAT 59.962 50.000 0.00 0.00 46.63 2.97
2971 6306 0.887387 GTTTTGGGTGCGAGGTGCTA 60.887 55.000 0.00 0.00 46.63 3.49
2972 6307 2.193536 GTTTTGGGTGCGAGGTGCT 61.194 57.895 0.00 0.00 46.63 4.40
2973 6308 2.335011 GTTTTGGGTGCGAGGTGC 59.665 61.111 0.00 0.00 46.70 5.01
2974 6309 1.841663 CTCGTTTTGGGTGCGAGGTG 61.842 60.000 5.41 0.00 45.60 4.00
2975 6310 1.597027 CTCGTTTTGGGTGCGAGGT 60.597 57.895 5.41 0.00 45.60 3.85
2976 6311 3.253955 CTCGTTTTGGGTGCGAGG 58.746 61.111 5.41 0.00 45.60 4.63
2978 6313 2.975799 GCCTCGTTTTGGGTGCGA 60.976 61.111 0.00 0.00 0.00 5.10
2979 6314 2.343163 TTTGCCTCGTTTTGGGTGCG 62.343 55.000 0.00 0.00 0.00 5.34
2980 6315 0.597377 CTTTGCCTCGTTTTGGGTGC 60.597 55.000 0.00 0.00 0.00 5.01
2981 6316 1.028905 TCTTTGCCTCGTTTTGGGTG 58.971 50.000 0.00 0.00 0.00 4.61
2982 6317 1.770294 TTCTTTGCCTCGTTTTGGGT 58.230 45.000 0.00 0.00 0.00 4.51
2983 6318 2.880963 TTTCTTTGCCTCGTTTTGGG 57.119 45.000 0.00 0.00 0.00 4.12
2984 6319 7.812669 ACTATTATTTTCTTTGCCTCGTTTTGG 59.187 33.333 0.00 0.00 0.00 3.28
2985 6320 8.742554 ACTATTATTTTCTTTGCCTCGTTTTG 57.257 30.769 0.00 0.00 0.00 2.44
2989 6324 9.391006 TGATTACTATTATTTTCTTTGCCTCGT 57.609 29.630 0.00 0.00 0.00 4.18
3009 6344 9.832445 TGGGTAGTTTTCTATCTTGATGATTAC 57.168 33.333 0.00 0.00 36.65 1.89
3013 6348 9.213777 ACTATGGGTAGTTTTCTATCTTGATGA 57.786 33.333 0.00 0.00 37.94 2.92
3014 6349 9.265901 CACTATGGGTAGTTTTCTATCTTGATG 57.734 37.037 0.00 0.00 39.12 3.07
3015 6350 9.213777 TCACTATGGGTAGTTTTCTATCTTGAT 57.786 33.333 0.00 0.00 39.12 2.57
3016 6351 8.603898 TCACTATGGGTAGTTTTCTATCTTGA 57.396 34.615 0.00 0.00 39.12 3.02
3017 6352 9.838339 ATTCACTATGGGTAGTTTTCTATCTTG 57.162 33.333 0.00 0.00 39.12 3.02
3022 6357 9.931698 TCTCTATTCACTATGGGTAGTTTTCTA 57.068 33.333 0.00 0.00 39.12 2.10
3023 6358 8.840200 TCTCTATTCACTATGGGTAGTTTTCT 57.160 34.615 0.00 0.00 39.12 2.52
3024 6359 9.886132 TTTCTCTATTCACTATGGGTAGTTTTC 57.114 33.333 0.00 0.00 39.12 2.29
3053 6388 9.751542 CAGTATTATGAATCGGAGAAAGTACTT 57.248 33.333 1.12 1.12 43.58 2.24
3054 6389 8.915036 ACAGTATTATGAATCGGAGAAAGTACT 58.085 33.333 0.00 0.00 43.58 2.73
3055 6390 9.530633 AACAGTATTATGAATCGGAGAAAGTAC 57.469 33.333 0.00 0.00 43.58 2.73
3056 6391 9.529325 CAACAGTATTATGAATCGGAGAAAGTA 57.471 33.333 0.00 0.00 43.58 2.24
3057 6392 7.011482 GCAACAGTATTATGAATCGGAGAAAGT 59.989 37.037 0.00 0.00 43.58 2.66
3058 6393 7.225538 AGCAACAGTATTATGAATCGGAGAAAG 59.774 37.037 0.00 0.00 43.58 2.62
3059 6394 7.047891 AGCAACAGTATTATGAATCGGAGAAA 58.952 34.615 0.00 0.00 43.58 2.52
3060 6395 6.582636 AGCAACAGTATTATGAATCGGAGAA 58.417 36.000 0.00 0.00 43.58 2.87
3061 6396 6.161855 AGCAACAGTATTATGAATCGGAGA 57.838 37.500 0.00 0.00 45.75 3.71
3062 6397 5.985530 TGAGCAACAGTATTATGAATCGGAG 59.014 40.000 0.00 0.00 0.00 4.63
3063 6398 5.912892 TGAGCAACAGTATTATGAATCGGA 58.087 37.500 0.00 0.00 0.00 4.55
3064 6399 6.603237 TTGAGCAACAGTATTATGAATCGG 57.397 37.500 0.00 0.00 0.00 4.18
3065 6400 9.803130 CTATTTGAGCAACAGTATTATGAATCG 57.197 33.333 0.00 0.00 0.00 3.34
3069 6404 9.836864 ACATCTATTTGAGCAACAGTATTATGA 57.163 29.630 0.00 0.00 0.00 2.15
3076 6411 9.890629 TTTAGATACATCTATTTGAGCAACAGT 57.109 29.630 0.00 0.00 39.02 3.55
3111 6446 9.640963 GTTGCTTAGACGGATATATCTAACAAT 57.359 33.333 12.42 0.00 34.61 2.71
3112 6447 8.635328 TGTTGCTTAGACGGATATATCTAACAA 58.365 33.333 12.42 8.08 34.48 2.83
3113 6448 8.173542 TGTTGCTTAGACGGATATATCTAACA 57.826 34.615 12.42 7.46 34.48 2.41
3114 6449 9.472361 TTTGTTGCTTAGACGGATATATCTAAC 57.528 33.333 12.42 4.52 34.48 2.34
3147 6482 9.447279 TTCATACCCCCATTCGATCTATATTAT 57.553 33.333 0.00 0.00 0.00 1.28
3148 6483 8.847982 TTCATACCCCCATTCGATCTATATTA 57.152 34.615 0.00 0.00 0.00 0.98
3149 6484 7.749377 TTCATACCCCCATTCGATCTATATT 57.251 36.000 0.00 0.00 0.00 1.28
3150 6485 7.568738 TGATTCATACCCCCATTCGATCTATAT 59.431 37.037 0.00 0.00 0.00 0.86
3151 6486 6.900743 TGATTCATACCCCCATTCGATCTATA 59.099 38.462 0.00 0.00 0.00 1.31
3152 6487 5.726308 TGATTCATACCCCCATTCGATCTAT 59.274 40.000 0.00 0.00 0.00 1.98
3153 6488 5.090845 TGATTCATACCCCCATTCGATCTA 58.909 41.667 0.00 0.00 0.00 1.98
3154 6489 3.909995 TGATTCATACCCCCATTCGATCT 59.090 43.478 0.00 0.00 0.00 2.75
3155 6490 4.286297 TGATTCATACCCCCATTCGATC 57.714 45.455 0.00 0.00 0.00 3.69
3156 6491 4.722526 TTGATTCATACCCCCATTCGAT 57.277 40.909 0.00 0.00 0.00 3.59
3157 6492 4.651778 GATTGATTCATACCCCCATTCGA 58.348 43.478 0.00 0.00 0.00 3.71
3158 6493 3.436704 CGATTGATTCATACCCCCATTCG 59.563 47.826 0.00 0.00 0.00 3.34
3159 6494 3.758554 CCGATTGATTCATACCCCCATTC 59.241 47.826 0.00 0.00 0.00 2.67
3160 6495 3.397618 TCCGATTGATTCATACCCCCATT 59.602 43.478 0.00 0.00 0.00 3.16
3161 6496 2.986019 TCCGATTGATTCATACCCCCAT 59.014 45.455 0.00 0.00 0.00 4.00
3162 6497 2.413601 TCCGATTGATTCATACCCCCA 58.586 47.619 0.00 0.00 0.00 4.96
3163 6498 3.610911 GATCCGATTGATTCATACCCCC 58.389 50.000 0.00 0.00 32.41 5.40
3164 6499 3.262420 CGATCCGATTGATTCATACCCC 58.738 50.000 0.00 0.00 32.41 4.95
3165 6500 3.262420 CCGATCCGATTGATTCATACCC 58.738 50.000 0.00 0.00 32.41 3.69
3166 6501 2.673368 GCCGATCCGATTGATTCATACC 59.327 50.000 0.00 0.00 32.41 2.73
3167 6502 2.345641 CGCCGATCCGATTGATTCATAC 59.654 50.000 0.00 0.00 32.41 2.39
3168 6503 2.029380 ACGCCGATCCGATTGATTCATA 60.029 45.455 0.00 0.00 32.41 2.15
3169 6504 1.270305 ACGCCGATCCGATTGATTCAT 60.270 47.619 0.00 0.00 32.41 2.57
3170 6505 0.104120 ACGCCGATCCGATTGATTCA 59.896 50.000 0.00 0.00 32.41 2.57
3171 6506 1.070577 CAACGCCGATCCGATTGATTC 60.071 52.381 0.00 0.00 32.41 2.52
3172 6507 0.937304 CAACGCCGATCCGATTGATT 59.063 50.000 0.00 0.00 32.41 2.57
3173 6508 0.880278 CCAACGCCGATCCGATTGAT 60.880 55.000 0.00 0.00 36.01 2.57
3174 6509 1.520564 CCAACGCCGATCCGATTGA 60.521 57.895 0.00 0.00 0.00 2.57
3175 6510 0.528901 TACCAACGCCGATCCGATTG 60.529 55.000 0.00 0.66 0.00 2.67
3176 6511 0.176219 TTACCAACGCCGATCCGATT 59.824 50.000 0.00 0.00 0.00 3.34
3177 6512 0.391597 ATTACCAACGCCGATCCGAT 59.608 50.000 0.00 0.00 0.00 4.18
3178 6513 0.176219 AATTACCAACGCCGATCCGA 59.824 50.000 0.00 0.00 0.00 4.55
3179 6514 0.303493 CAATTACCAACGCCGATCCG 59.697 55.000 0.00 0.00 0.00 4.18
3180 6515 0.028902 GCAATTACCAACGCCGATCC 59.971 55.000 0.00 0.00 0.00 3.36
3181 6516 1.014352 AGCAATTACCAACGCCGATC 58.986 50.000 0.00 0.00 0.00 3.69
3182 6517 0.732571 CAGCAATTACCAACGCCGAT 59.267 50.000 0.00 0.00 0.00 4.18
3183 6518 0.320858 TCAGCAATTACCAACGCCGA 60.321 50.000 0.00 0.00 0.00 5.54
3184 6519 0.732571 ATCAGCAATTACCAACGCCG 59.267 50.000 0.00 0.00 0.00 6.46
3185 6520 1.742831 TGATCAGCAATTACCAACGCC 59.257 47.619 0.00 0.00 0.00 5.68
3186 6521 2.223340 CCTGATCAGCAATTACCAACGC 60.223 50.000 17.76 0.00 0.00 4.84
3187 6522 3.009723 ACCTGATCAGCAATTACCAACG 58.990 45.455 17.76 1.58 0.00 4.10
3188 6523 3.428045 GCACCTGATCAGCAATTACCAAC 60.428 47.826 17.76 0.00 0.00 3.77
3189 6524 2.754552 GCACCTGATCAGCAATTACCAA 59.245 45.455 17.76 0.00 0.00 3.67
3190 6525 2.025981 AGCACCTGATCAGCAATTACCA 60.026 45.455 17.76 0.00 0.00 3.25
3191 6526 2.615912 GAGCACCTGATCAGCAATTACC 59.384 50.000 17.76 1.05 0.00 2.85
3192 6527 2.286294 CGAGCACCTGATCAGCAATTAC 59.714 50.000 17.76 5.73 0.00 1.89
3193 6528 2.554142 CGAGCACCTGATCAGCAATTA 58.446 47.619 17.76 0.00 0.00 1.40
3194 6529 1.376543 CGAGCACCTGATCAGCAATT 58.623 50.000 17.76 2.56 0.00 2.32
3195 6530 0.463295 CCGAGCACCTGATCAGCAAT 60.463 55.000 17.76 1.81 0.00 3.56
3196 6531 1.078918 CCGAGCACCTGATCAGCAA 60.079 57.895 17.76 0.00 0.00 3.91
3197 6532 2.580815 CCGAGCACCTGATCAGCA 59.419 61.111 17.76 0.00 0.00 4.41
3198 6533 2.894387 GCCGAGCACCTGATCAGC 60.894 66.667 17.76 7.28 0.00 4.26
3199 6534 2.584418 CGCCGAGCACCTGATCAG 60.584 66.667 16.24 16.24 0.00 2.90
3200 6535 3.381983 ACGCCGAGCACCTGATCA 61.382 61.111 0.00 0.00 0.00 2.92
3201 6536 2.887568 CACGCCGAGCACCTGATC 60.888 66.667 0.00 0.00 0.00 2.92
3202 6537 4.457496 CCACGCCGAGCACCTGAT 62.457 66.667 0.00 0.00 0.00 2.90
3216 6551 3.486875 GGCAAACTATATTCACGCACCAC 60.487 47.826 0.00 0.00 0.00 4.16
3217 6552 2.680841 GGCAAACTATATTCACGCACCA 59.319 45.455 0.00 0.00 0.00 4.17
3218 6553 2.286184 CGGCAAACTATATTCACGCACC 60.286 50.000 0.00 0.00 0.00 5.01
3219 6554 2.286184 CCGGCAAACTATATTCACGCAC 60.286 50.000 0.00 0.00 0.00 5.34
3220 6555 1.937223 CCGGCAAACTATATTCACGCA 59.063 47.619 0.00 0.00 0.00 5.24
3221 6556 1.333791 GCCGGCAAACTATATTCACGC 60.334 52.381 24.80 0.00 0.00 5.34
3222 6557 1.263217 GGCCGGCAAACTATATTCACG 59.737 52.381 30.85 0.00 0.00 4.35
3223 6558 1.263217 CGGCCGGCAAACTATATTCAC 59.737 52.381 30.85 4.40 0.00 3.18
3224 6559 1.588674 CGGCCGGCAAACTATATTCA 58.411 50.000 30.85 0.00 0.00 2.57
3225 6560 0.872388 CCGGCCGGCAAACTATATTC 59.128 55.000 34.96 5.23 0.00 1.75
3226 6561 0.470766 TCCGGCCGGCAAACTATATT 59.529 50.000 39.89 0.00 34.68 1.28
3227 6562 0.470766 TTCCGGCCGGCAAACTATAT 59.529 50.000 39.89 0.00 34.68 0.86
3228 6563 0.179067 CTTCCGGCCGGCAAACTATA 60.179 55.000 39.89 17.41 34.68 1.31
3229 6564 1.451387 CTTCCGGCCGGCAAACTAT 60.451 57.895 39.89 0.00 34.68 2.12
3230 6565 2.046700 CTTCCGGCCGGCAAACTA 60.047 61.111 39.89 19.14 34.68 2.24
3242 6577 4.410400 GTGCTCCCCCACCTTCCG 62.410 72.222 0.00 0.00 0.00 4.30
3243 6578 4.410400 CGTGCTCCCCCACCTTCC 62.410 72.222 0.00 0.00 32.10 3.46
3244 6579 3.607370 GACGTGCTCCCCCACCTTC 62.607 68.421 0.00 0.00 32.10 3.46
3245 6580 2.741878 TAGACGTGCTCCCCCACCTT 62.742 60.000 0.00 0.00 32.10 3.50
3246 6581 3.233919 TAGACGTGCTCCCCCACCT 62.234 63.158 0.00 0.00 32.10 4.00
3247 6582 2.682494 TAGACGTGCTCCCCCACC 60.682 66.667 0.00 0.00 32.10 4.61
3248 6583 2.893398 CTAGACGTGCTCCCCCAC 59.107 66.667 0.00 0.00 0.00 4.61
3249 6584 3.075005 GCTAGACGTGCTCCCCCA 61.075 66.667 0.00 0.00 0.00 4.96
3250 6585 3.075005 TGCTAGACGTGCTCCCCC 61.075 66.667 0.00 0.00 0.00 5.40
3251 6586 2.184579 GTGCTAGACGTGCTCCCC 59.815 66.667 0.00 0.00 0.00 4.81
3252 6587 2.184579 GGTGCTAGACGTGCTCCC 59.815 66.667 0.00 0.00 37.92 4.30
3253 6588 1.153745 CAGGTGCTAGACGTGCTCC 60.154 63.158 8.88 8.88 42.44 4.70
3254 6589 0.243907 TTCAGGTGCTAGACGTGCTC 59.756 55.000 0.00 0.00 39.80 4.26
3255 6590 0.898320 ATTCAGGTGCTAGACGTGCT 59.102 50.000 0.00 0.00 39.80 4.40
3256 6591 2.194271 GTATTCAGGTGCTAGACGTGC 58.806 52.381 0.00 0.00 39.80 5.34
3257 6592 2.794981 CGGTATTCAGGTGCTAGACGTG 60.795 54.545 0.00 1.47 41.08 4.49
3258 6593 1.404391 CGGTATTCAGGTGCTAGACGT 59.596 52.381 0.00 0.00 0.00 4.34
3259 6594 1.269102 CCGGTATTCAGGTGCTAGACG 60.269 57.143 0.00 0.00 0.00 4.18
3260 6595 1.538419 GCCGGTATTCAGGTGCTAGAC 60.538 57.143 1.90 0.00 0.00 2.59
3261 6596 0.750850 GCCGGTATTCAGGTGCTAGA 59.249 55.000 1.90 0.00 0.00 2.43
3262 6597 0.464036 TGCCGGTATTCAGGTGCTAG 59.536 55.000 1.90 0.00 0.00 3.42
3263 6598 0.464036 CTGCCGGTATTCAGGTGCTA 59.536 55.000 1.90 0.00 0.00 3.49
3264 6599 1.221840 CTGCCGGTATTCAGGTGCT 59.778 57.895 1.90 0.00 0.00 4.40
3265 6600 1.090052 GTCTGCCGGTATTCAGGTGC 61.090 60.000 1.90 0.00 0.00 5.01
3266 6601 0.462047 GGTCTGCCGGTATTCAGGTG 60.462 60.000 1.90 0.00 0.00 4.00
3267 6602 1.905512 GGTCTGCCGGTATTCAGGT 59.094 57.895 1.90 0.00 0.00 4.00
3268 6603 4.857251 GGTCTGCCGGTATTCAGG 57.143 61.111 1.90 0.00 0.00 3.86
3278 6613 3.365265 CCAAACTGCCGGTCTGCC 61.365 66.667 1.90 0.00 0.00 4.85
3279 6614 3.365265 CCCAAACTGCCGGTCTGC 61.365 66.667 1.90 0.00 0.00 4.26
3280 6615 3.365265 GCCCAAACTGCCGGTCTG 61.365 66.667 1.90 2.06 0.00 3.51
3287 6622 3.435186 GAGGCTCGCCCAAACTGC 61.435 66.667 3.92 0.00 36.58 4.40
3288 6623 2.747855 GGAGGCTCGCCCAAACTG 60.748 66.667 8.69 0.00 36.58 3.16
3289 6624 4.394712 CGGAGGCTCGCCCAAACT 62.395 66.667 8.69 0.00 36.58 2.66
3290 6625 4.699522 ACGGAGGCTCGCCCAAAC 62.700 66.667 8.69 0.00 36.58 2.93
3291 6626 4.388499 GACGGAGGCTCGCCCAAA 62.388 66.667 8.69 0.00 36.58 3.28
3298 6633 4.803426 CACAGGCGACGGAGGCTC 62.803 72.222 5.78 5.78 45.76 4.70
3300 6635 4.803426 CTCACAGGCGACGGAGGC 62.803 72.222 0.00 0.00 0.00 4.70
3301 6636 3.062466 TCTCACAGGCGACGGAGG 61.062 66.667 0.00 0.00 0.00 4.30
3302 6637 2.179517 GTCTCACAGGCGACGGAG 59.820 66.667 0.00 0.00 0.00 4.63
3303 6638 2.282251 AGTCTCACAGGCGACGGA 60.282 61.111 0.00 0.00 35.38 4.69
3304 6639 2.179517 GAGTCTCACAGGCGACGG 59.820 66.667 0.00 0.00 35.38 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.