Multiple sequence alignment - TraesCS6A01G013600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G013600 chr6A 100.000 5664 0 0 1 5664 6720525 6726188 0.000000e+00 10460
1 TraesCS6A01G013600 chr6A 82.865 712 106 11 33 738 412847579 412848280 4.820000e-175 625
2 TraesCS6A01G013600 chr6A 87.830 493 44 5 1026 1514 136565126 136564646 1.070000e-156 564
3 TraesCS6A01G013600 chr6D 94.003 2418 120 21 2612 5016 7096583 7098988 0.000000e+00 3639
4 TraesCS6A01G013600 chr6D 90.933 772 68 2 1 771 7093861 7094631 0.000000e+00 1037
5 TraesCS6A01G013600 chr6D 89.036 757 50 11 778 1525 7094805 7095537 0.000000e+00 907
6 TraesCS6A01G013600 chr6D 93.182 616 35 3 1728 2343 7095534 7096142 0.000000e+00 898
7 TraesCS6A01G013600 chr6D 83.541 802 68 35 1018 1798 473225176 473225934 0.000000e+00 691
8 TraesCS6A01G013600 chr6D 95.149 268 9 2 2325 2588 7096151 7096418 2.440000e-113 420
9 TraesCS6A01G013600 chr6D 87.826 345 21 12 5044 5371 7098981 7099321 8.900000e-103 385
10 TraesCS6A01G013600 chr6B 93.253 1408 54 16 2623 4002 12661110 12662504 0.000000e+00 2036
11 TraesCS6A01G013600 chr6B 89.557 881 66 8 1729 2607 12660095 12660951 0.000000e+00 1094
12 TraesCS6A01G013600 chr6B 92.507 694 42 9 4318 5003 12662740 12663431 0.000000e+00 985
13 TraesCS6A01G013600 chr6B 88.211 738 55 13 809 1527 12659375 12660099 0.000000e+00 852
14 TraesCS6A01G013600 chr6B 84.070 747 110 6 32 772 469705674 469706417 0.000000e+00 712
15 TraesCS6A01G013600 chr6B 83.902 528 80 5 240 764 183376097 183375572 3.050000e-137 499
16 TraesCS6A01G013600 chr6B 94.167 240 12 2 4029 4267 12662504 12662742 1.160000e-96 364
17 TraesCS6A01G013600 chr6B 79.739 153 24 7 5044 5195 12663433 12663579 2.790000e-18 104
18 TraesCS6A01G013600 chr7D 85.501 738 97 7 29 763 442765030 442765760 0.000000e+00 761
19 TraesCS6A01G013600 chr3D 83.145 795 80 31 1018 1798 182926945 182927699 0.000000e+00 676
20 TraesCS6A01G013600 chr2B 83.198 738 114 8 32 764 765544306 765543574 0.000000e+00 667
21 TraesCS6A01G013600 chr2D 84.559 680 95 7 91 764 623507970 623507295 0.000000e+00 665
22 TraesCS6A01G013600 chr2D 89.258 512 45 4 1018 1525 466831367 466830862 2.880000e-177 632
23 TraesCS6A01G013600 chr2D 95.098 102 5 0 1697 1798 466830728 466830627 1.630000e-35 161
24 TraesCS6A01G013600 chr3A 82.625 800 83 34 1016 1798 289987478 289988238 0.000000e+00 656
25 TraesCS6A01G013600 chr4D 89.648 512 41 5 1018 1525 387808045 387807542 4.780000e-180 641
26 TraesCS6A01G013600 chr4D 95.098 102 5 0 1697 1798 115695411 115695512 1.630000e-35 161
27 TraesCS6A01G013600 chr4D 95.098 102 5 0 1697 1798 437400406 437400305 1.630000e-35 161
28 TraesCS6A01G013600 chr5A 86.473 584 45 11 1018 1587 602122661 602122098 1.350000e-170 610
29 TraesCS6A01G013600 chr5A 79.599 299 49 7 2304 2599 501496423 501496134 2.680000e-48 204
30 TraesCS6A01G013600 chr5A 95.098 102 5 0 1697 1798 602122020 602121919 1.630000e-35 161
31 TraesCS6A01G013600 chr7B 88.623 501 44 7 1018 1514 670834717 670834226 1.050000e-166 597
32 TraesCS6A01G013600 chr7A 80.501 718 126 9 57 764 191902692 191901979 6.460000e-149 538
33 TraesCS6A01G013600 chr7A 89.600 125 12 1 1674 1798 321840902 321840779 2.110000e-34 158
34 TraesCS6A01G013600 chr2A 81.549 607 92 16 32 630 755025687 755025093 3.070000e-132 483


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G013600 chr6A 6720525 6726188 5663 False 10460.000000 10460 100.000000 1 5664 1 chr6A.!!$F1 5663
1 TraesCS6A01G013600 chr6A 412847579 412848280 701 False 625.000000 625 82.865000 33 738 1 chr6A.!!$F2 705
2 TraesCS6A01G013600 chr6D 7093861 7099321 5460 False 1214.333333 3639 91.688167 1 5371 6 chr6D.!!$F2 5370
3 TraesCS6A01G013600 chr6D 473225176 473225934 758 False 691.000000 691 83.541000 1018 1798 1 chr6D.!!$F1 780
4 TraesCS6A01G013600 chr6B 12659375 12663579 4204 False 905.833333 2036 89.572333 809 5195 6 chr6B.!!$F2 4386
5 TraesCS6A01G013600 chr6B 469705674 469706417 743 False 712.000000 712 84.070000 32 772 1 chr6B.!!$F1 740
6 TraesCS6A01G013600 chr6B 183375572 183376097 525 True 499.000000 499 83.902000 240 764 1 chr6B.!!$R1 524
7 TraesCS6A01G013600 chr7D 442765030 442765760 730 False 761.000000 761 85.501000 29 763 1 chr7D.!!$F1 734
8 TraesCS6A01G013600 chr3D 182926945 182927699 754 False 676.000000 676 83.145000 1018 1798 1 chr3D.!!$F1 780
9 TraesCS6A01G013600 chr2B 765543574 765544306 732 True 667.000000 667 83.198000 32 764 1 chr2B.!!$R1 732
10 TraesCS6A01G013600 chr2D 623507295 623507970 675 True 665.000000 665 84.559000 91 764 1 chr2D.!!$R1 673
11 TraesCS6A01G013600 chr2D 466830627 466831367 740 True 396.500000 632 92.178000 1018 1798 2 chr2D.!!$R2 780
12 TraesCS6A01G013600 chr3A 289987478 289988238 760 False 656.000000 656 82.625000 1016 1798 1 chr3A.!!$F1 782
13 TraesCS6A01G013600 chr4D 387807542 387808045 503 True 641.000000 641 89.648000 1018 1525 1 chr4D.!!$R1 507
14 TraesCS6A01G013600 chr5A 602121919 602122661 742 True 385.500000 610 90.785500 1018 1798 2 chr5A.!!$R2 780
15 TraesCS6A01G013600 chr7A 191901979 191902692 713 True 538.000000 538 80.501000 57 764 1 chr7A.!!$R1 707
16 TraesCS6A01G013600 chr2A 755025093 755025687 594 True 483.000000 483 81.549000 32 630 1 chr2A.!!$R1 598

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
807 990 0.240945 CCATTTCGGTGGCAGAACAC 59.759 55.000 0.0 0.0 40.60 3.32 F
980 1172 0.402121 AAGCTTTCGCCTTTCTCCCT 59.598 50.000 0.0 0.0 36.60 4.20 F
1480 1717 0.526310 GCTCGCTGCCATTTTTAGCC 60.526 55.000 0.0 0.0 34.02 3.93 F
1482 1719 1.064654 CTCGCTGCCATTTTTAGCCTC 59.935 52.381 0.0 0.0 34.02 4.70 F
1861 2112 1.215014 GCAAGCAGTTTGTTTCGGCC 61.215 55.000 0.0 0.0 39.08 6.13 F
2500 2784 1.467734 GGCTGTTGACTTCTCATGCAG 59.532 52.381 0.0 0.0 34.96 4.41 F
3420 3887 1.138069 TCTCTTGCACCACAAAGTCGA 59.862 47.619 0.0 0.0 37.96 4.20 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1941 2192 0.031178 GCATCAATCGATTGGGGCAC 59.969 55.000 31.71 18.92 38.3 5.01 R
2282 2535 0.539669 AAAGGAAAACTCAGCGGGGG 60.540 55.000 0.00 0.00 0.0 5.40 R
2283 2536 0.881796 GAAAGGAAAACTCAGCGGGG 59.118 55.000 0.00 0.00 0.0 5.73 R
2344 2628 1.411246 AGGACACTACGCACACAAAGA 59.589 47.619 0.00 0.00 0.0 2.52 R
2672 3115 1.927174 CAGGCATGTTACTCGTACTGC 59.073 52.381 0.00 0.00 0.0 4.40 R
3933 4406 0.249398 GTTACATGCGGTGGGACTCT 59.751 55.000 0.00 0.00 0.0 3.24 R
5366 5887 0.034896 TCTCAACGGGAAGGCAAGAC 59.965 55.000 0.00 0.00 0.0 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
115 121 5.105023 TGACAGATCTGAGGAGAAATCCAAG 60.105 44.000 29.27 0.00 0.00 3.61
145 151 4.045636 ACACCAAGTGAAATTGCAAGAC 57.954 40.909 4.94 0.00 36.96 3.01
156 162 9.598517 AGTGAAATTGCAAGACATAAAGAAAAA 57.401 25.926 4.94 0.00 0.00 1.94
164 170 9.677567 TGCAAGACATAAAGAAAAATTACAGAC 57.322 29.630 0.00 0.00 0.00 3.51
223 234 2.497138 CACAATCTTCAGCCACTGTCA 58.503 47.619 0.00 0.00 32.61 3.58
229 240 2.803155 TTCAGCCACTGTCATCGCCC 62.803 60.000 0.00 0.00 32.61 6.13
313 325 6.481976 CCATAGCATCAAAAATGCATTGTGAT 59.518 34.615 23.63 23.63 46.77 3.06
395 409 3.594134 CACATCTCCACTTCTCTTGGAC 58.406 50.000 0.00 0.00 38.28 4.02
460 474 1.644786 GAACCGGCAACCATCTTCCG 61.645 60.000 0.00 0.00 41.41 4.30
507 521 2.579201 CTTGGATGAGACCGCCGT 59.421 61.111 0.00 0.00 0.00 5.68
603 618 2.859165 TGAAGCCGAAGAAACAGGAT 57.141 45.000 0.00 0.00 0.00 3.24
611 626 2.795329 GAAGAAACAGGATCCTTGGCA 58.205 47.619 13.00 0.00 0.00 4.92
642 657 4.800554 CCGTCTTGAAGGCCTTGT 57.199 55.556 26.25 0.00 0.00 3.16
714 729 3.487563 GGTTGCCCGAAAACTTCTATG 57.512 47.619 0.00 0.00 0.00 2.23
726 741 6.128172 CGAAAACTTCTATGCCTGACAAAGAT 60.128 38.462 0.00 0.00 0.00 2.40
750 766 2.976350 ACTGACCGAGCGACGTCA 60.976 61.111 17.16 4.51 40.78 4.35
772 788 6.036517 GTCACCTGAACAAACTAGCATAGATG 59.963 42.308 0.00 0.00 42.77 2.90
774 790 6.036517 CACCTGAACAAACTAGCATAGATGTC 59.963 42.308 0.00 0.00 42.77 3.06
776 792 5.109210 TGAACAAACTAGCATAGATGTCGG 58.891 41.667 0.00 0.00 42.77 4.79
777 793 3.458189 ACAAACTAGCATAGATGTCGGC 58.542 45.455 0.00 0.00 42.77 5.54
797 980 1.167781 ACCGTTTTCGCCATTTCGGT 61.168 50.000 0.00 0.00 44.87 4.69
799 982 0.727793 CGTTTTCGCCATTTCGGTGG 60.728 55.000 0.00 0.00 46.14 4.61
807 990 0.240945 CCATTTCGGTGGCAGAACAC 59.759 55.000 0.00 0.00 40.60 3.32
825 1008 2.482721 ACACGTTTATCAGGCCGAAAAG 59.517 45.455 0.00 2.13 0.00 2.27
839 1022 1.228675 AAAAGGCTGGGCTCAGGTG 60.229 57.895 17.16 0.00 41.19 4.00
865 1052 1.140852 CTCTCCAATGGGCCGAATGTA 59.859 52.381 0.00 0.00 0.00 2.29
869 1056 3.482436 TCCAATGGGCCGAATGTATTAC 58.518 45.455 0.00 0.00 0.00 1.89
870 1057 3.117851 TCCAATGGGCCGAATGTATTACA 60.118 43.478 0.00 0.00 0.00 2.41
871 1058 3.634448 CCAATGGGCCGAATGTATTACAA 59.366 43.478 1.85 0.00 0.00 2.41
872 1059 4.499019 CCAATGGGCCGAATGTATTACAAC 60.499 45.833 1.85 0.00 0.00 3.32
873 1060 3.351794 TGGGCCGAATGTATTACAACA 57.648 42.857 0.00 0.00 0.00 3.33
874 1061 3.275143 TGGGCCGAATGTATTACAACAG 58.725 45.455 0.00 0.00 31.70 3.16
879 1071 2.933906 CGAATGTATTACAACAGCCGGT 59.066 45.455 1.90 0.00 31.70 5.28
892 1084 3.717294 CCGGTAGCCAGGCCTTGT 61.717 66.667 8.22 0.00 0.00 3.16
980 1172 0.402121 AAGCTTTCGCCTTTCTCCCT 59.598 50.000 0.00 0.00 36.60 4.20
983 1175 1.611936 GCTTTCGCCTTTCTCCCTTCT 60.612 52.381 0.00 0.00 0.00 2.85
987 1180 1.190643 CGCCTTTCTCCCTTCTCTCT 58.809 55.000 0.00 0.00 0.00 3.10
991 1184 2.187100 CTTTCTCCCTTCTCTCTGCCT 58.813 52.381 0.00 0.00 0.00 4.75
1053 1248 1.076995 CTTCCCCAAATCCCCGTCC 60.077 63.158 0.00 0.00 0.00 4.79
1160 1366 4.821589 CAGCGCTCCGTCCCCTTC 62.822 72.222 7.13 0.00 0.00 3.46
1480 1717 0.526310 GCTCGCTGCCATTTTTAGCC 60.526 55.000 0.00 0.00 34.02 3.93
1482 1719 1.064654 CTCGCTGCCATTTTTAGCCTC 59.935 52.381 0.00 0.00 34.02 4.70
1556 1797 1.802337 AAAAGTTCCCTTTCGCCCGC 61.802 55.000 0.00 0.00 40.01 6.13
1587 1838 1.902938 TTCGATGCCAAATCACACCA 58.097 45.000 0.00 0.00 0.00 4.17
1588 1839 2.127271 TCGATGCCAAATCACACCAT 57.873 45.000 0.00 0.00 0.00 3.55
1591 1842 2.094597 CGATGCCAAATCACACCATGTT 60.095 45.455 0.00 0.00 0.00 2.71
1592 1843 3.614630 CGATGCCAAATCACACCATGTTT 60.615 43.478 0.00 0.00 0.00 2.83
1593 1844 3.109044 TGCCAAATCACACCATGTTTG 57.891 42.857 0.00 0.00 33.07 2.93
1594 1845 1.799994 GCCAAATCACACCATGTTTGC 59.200 47.619 0.00 0.00 32.47 3.68
1595 1846 2.548493 GCCAAATCACACCATGTTTGCT 60.548 45.455 0.00 0.00 32.47 3.91
1596 1847 3.731089 CCAAATCACACCATGTTTGCTT 58.269 40.909 0.00 0.00 32.47 3.91
1597 1848 3.495377 CCAAATCACACCATGTTTGCTTG 59.505 43.478 0.00 0.00 32.47 4.01
1598 1849 2.443887 ATCACACCATGTTTGCTTGC 57.556 45.000 0.00 0.00 0.00 4.01
1599 1850 1.401761 TCACACCATGTTTGCTTGCT 58.598 45.000 0.00 0.00 0.00 3.91
1600 1851 1.755959 TCACACCATGTTTGCTTGCTT 59.244 42.857 0.00 0.00 0.00 3.91
1601 1852 1.862201 CACACCATGTTTGCTTGCTTG 59.138 47.619 0.00 0.00 0.00 4.01
1609 1860 4.852134 TGTTTGCTTGCTTGTGATGTAT 57.148 36.364 0.00 0.00 0.00 2.29
1611 1862 6.324561 TGTTTGCTTGCTTGTGATGTATTA 57.675 33.333 0.00 0.00 0.00 0.98
1612 1863 6.148948 TGTTTGCTTGCTTGTGATGTATTAC 58.851 36.000 0.00 0.00 0.00 1.89
1613 1864 4.598406 TGCTTGCTTGTGATGTATTACG 57.402 40.909 0.00 0.00 0.00 3.18
1621 1872 5.062934 GCTTGTGATGTATTACGTGCACTAA 59.937 40.000 16.19 12.48 0.00 2.24
1622 1873 6.238103 GCTTGTGATGTATTACGTGCACTAAT 60.238 38.462 16.19 17.95 0.00 1.73
1623 1874 6.822073 TGTGATGTATTACGTGCACTAATC 57.178 37.500 16.19 11.38 0.00 1.75
1624 1875 5.457473 TGTGATGTATTACGTGCACTAATCG 59.543 40.000 16.19 3.38 0.00 3.34
1626 1877 6.197655 GTGATGTATTACGTGCACTAATCGAA 59.802 38.462 16.19 7.64 0.00 3.71
1628 1879 5.643664 TGTATTACGTGCACTAATCGAAGT 58.356 37.500 16.19 5.13 0.00 3.01
1629 1880 6.094719 TGTATTACGTGCACTAATCGAAGTT 58.905 36.000 16.19 0.00 0.00 2.66
1631 1882 5.997732 TTACGTGCACTAATCGAAGTTAC 57.002 39.130 16.19 0.00 0.00 2.50
1632 1883 3.904571 ACGTGCACTAATCGAAGTTACA 58.095 40.909 16.19 0.00 0.00 2.41
1634 1885 4.384846 ACGTGCACTAATCGAAGTTACAAG 59.615 41.667 16.19 0.00 0.00 3.16
1635 1886 4.384846 CGTGCACTAATCGAAGTTACAAGT 59.615 41.667 16.19 0.00 0.00 3.16
1636 1887 5.609088 GTGCACTAATCGAAGTTACAAGTG 58.391 41.667 10.32 0.00 0.00 3.16
1637 1888 4.151689 TGCACTAATCGAAGTTACAAGTGC 59.848 41.667 15.57 15.57 46.85 4.40
1638 1889 4.151689 GCACTAATCGAAGTTACAAGTGCA 59.848 41.667 17.07 0.00 46.21 4.57
1639 1890 5.333798 GCACTAATCGAAGTTACAAGTGCAA 60.334 40.000 17.07 0.00 46.21 4.08
1640 1891 6.655062 CACTAATCGAAGTTACAAGTGCAAA 58.345 36.000 0.00 0.00 0.00 3.68
1643 1894 8.349983 ACTAATCGAAGTTACAAGTGCAAAATT 58.650 29.630 0.00 0.00 0.00 1.82
1644 1895 9.180678 CTAATCGAAGTTACAAGTGCAAAATTT 57.819 29.630 0.00 0.00 0.00 1.82
1647 1898 8.722342 TCGAAGTTACAAGTGCAAAATTTATC 57.278 30.769 0.00 0.00 0.00 1.75
1648 1899 8.564574 TCGAAGTTACAAGTGCAAAATTTATCT 58.435 29.630 0.00 0.00 0.00 1.98
1649 1900 8.629986 CGAAGTTACAAGTGCAAAATTTATCTG 58.370 33.333 0.00 0.00 0.00 2.90
1653 1904 8.850452 GTTACAAGTGCAAAATTTATCTGTAGC 58.150 33.333 0.00 0.00 0.00 3.58
1654 1905 6.980593 ACAAGTGCAAAATTTATCTGTAGCA 58.019 32.000 0.00 0.00 0.00 3.49
1657 1908 9.571810 CAAGTGCAAAATTTATCTGTAGCATTA 57.428 29.630 0.00 0.00 32.98 1.90
1658 1909 9.573133 AAGTGCAAAATTTATCTGTAGCATTAC 57.427 29.630 0.00 0.00 32.98 1.89
1659 1910 8.739039 AGTGCAAAATTTATCTGTAGCATTACA 58.261 29.630 0.00 0.00 37.45 2.41
1660 1911 9.352784 GTGCAAAATTTATCTGTAGCATTACAA 57.647 29.630 0.00 0.00 39.21 2.41
1661 1912 9.352784 TGCAAAATTTATCTGTAGCATTACAAC 57.647 29.630 0.00 0.00 39.21 3.32
1662 1913 9.352784 GCAAAATTTATCTGTAGCATTACAACA 57.647 29.630 0.00 0.00 39.21 3.33
1664 1915 9.855021 AAAATTTATCTGTAGCATTACAACACC 57.145 29.630 0.00 0.00 39.21 4.16
1665 1916 8.574251 AATTTATCTGTAGCATTACAACACCA 57.426 30.769 0.00 0.00 39.21 4.17
1666 1917 7.609760 TTTATCTGTAGCATTACAACACCAG 57.390 36.000 0.00 0.00 39.21 4.00
1667 1918 4.617253 TCTGTAGCATTACAACACCAGT 57.383 40.909 0.00 0.00 39.21 4.00
1668 1919 4.968259 TCTGTAGCATTACAACACCAGTT 58.032 39.130 0.00 0.00 39.21 3.16
1669 1920 4.994852 TCTGTAGCATTACAACACCAGTTC 59.005 41.667 0.00 0.00 39.21 3.01
1670 1921 3.743911 TGTAGCATTACAACACCAGTTCG 59.256 43.478 0.00 0.00 36.86 3.95
1671 1922 2.846193 AGCATTACAACACCAGTTCGT 58.154 42.857 0.00 0.00 35.28 3.85
1672 1923 2.806244 AGCATTACAACACCAGTTCGTC 59.194 45.455 0.00 0.00 35.28 4.20
1673 1924 2.806244 GCATTACAACACCAGTTCGTCT 59.194 45.455 0.00 0.00 35.28 4.18
1674 1925 3.991773 GCATTACAACACCAGTTCGTCTA 59.008 43.478 0.00 0.00 35.28 2.59
1675 1926 4.630069 GCATTACAACACCAGTTCGTCTAT 59.370 41.667 0.00 0.00 35.28 1.98
1676 1927 5.220416 GCATTACAACACCAGTTCGTCTATC 60.220 44.000 0.00 0.00 35.28 2.08
1677 1928 5.717078 TTACAACACCAGTTCGTCTATCT 57.283 39.130 0.00 0.00 35.28 1.98
1678 1929 4.602340 ACAACACCAGTTCGTCTATCTT 57.398 40.909 0.00 0.00 35.28 2.40
1679 1930 4.557205 ACAACACCAGTTCGTCTATCTTC 58.443 43.478 0.00 0.00 35.28 2.87
1680 1931 4.038763 ACAACACCAGTTCGTCTATCTTCA 59.961 41.667 0.00 0.00 35.28 3.02
1681 1932 5.171476 CAACACCAGTTCGTCTATCTTCAT 58.829 41.667 0.00 0.00 35.28 2.57
1682 1933 5.407407 ACACCAGTTCGTCTATCTTCATT 57.593 39.130 0.00 0.00 0.00 2.57
1687 1938 6.812160 ACCAGTTCGTCTATCTTCATTTGTAC 59.188 38.462 0.00 0.00 0.00 2.90
1692 1943 9.229784 GTTCGTCTATCTTCATTTGTACGATTA 57.770 33.333 0.00 0.00 37.86 1.75
1693 1944 9.961265 TTCGTCTATCTTCATTTGTACGATTAT 57.039 29.630 0.00 0.00 37.86 1.28
1861 2112 1.215014 GCAAGCAGTTTGTTTCGGCC 61.215 55.000 0.00 0.00 39.08 6.13
1941 2192 1.927174 CGTAAACAATCCTGGCTCTCG 59.073 52.381 0.00 0.00 0.00 4.04
1943 2194 1.813513 AAACAATCCTGGCTCTCGTG 58.186 50.000 0.00 0.00 0.00 4.35
1977 2228 7.201644 CGATTGATGCATAGTACTTGGTTTTCT 60.202 37.037 0.00 0.00 0.00 2.52
1981 2232 4.083537 TGCATAGTACTTGGTTTTCTTGCG 60.084 41.667 0.00 0.00 0.00 4.85
2010 2261 3.648339 TTCTTGCACTCATTTTGGCTC 57.352 42.857 0.00 0.00 0.00 4.70
2087 2338 2.184066 GATTTTGCCGGCGCCAAT 59.816 55.556 28.98 18.12 0.00 3.16
2099 2350 1.892338 CGCCAATCCCATTGTGCTT 59.108 52.632 7.59 0.00 38.59 3.91
2120 2371 7.224557 GTGCTTGTGATAACAAAGGTGAATTTT 59.775 33.333 0.00 0.00 0.00 1.82
2123 2374 8.417780 TTGTGATAACAAAGGTGAATTTTGTG 57.582 30.769 4.35 0.00 45.28 3.33
2148 2399 6.653183 CATTGTCAAGTTCTCAGTACTGTTG 58.347 40.000 21.99 17.51 0.00 3.33
2165 2416 4.021104 ACTGTTGCTGCTGTCAGATAACTA 60.021 41.667 19.46 0.00 42.95 2.24
2176 2429 6.531503 TGTCAGATAACTAAAGCTAGCTGT 57.468 37.500 20.16 16.49 33.36 4.40
2219 2472 7.009179 TCCTAGAGACACAGATTTGAATTGT 57.991 36.000 0.00 0.00 0.00 2.71
2276 2529 3.348119 GAAACTCAAGTGAGATTCCCCC 58.652 50.000 15.15 0.00 43.72 5.40
2318 2572 9.367444 GTTTTCCTTTCTATTTCGTCAGATCTA 57.633 33.333 0.00 0.00 0.00 1.98
2500 2784 1.467734 GGCTGTTGACTTCTCATGCAG 59.532 52.381 0.00 0.00 34.96 4.41
2522 2806 6.034591 CAGAATCCTGACTGCATTTTCATTC 58.965 40.000 0.00 0.00 43.02 2.67
2581 2865 5.308014 AGCATTATTCATCTATTGCGACCA 58.692 37.500 0.00 0.00 34.66 4.02
2607 2891 6.772233 AGGCATAAATATCACATTGTGCTGTA 59.228 34.615 12.04 5.56 41.59 2.74
2608 2892 7.040892 AGGCATAAATATCACATTGTGCTGTAG 60.041 37.037 12.04 0.00 41.59 2.74
2609 2893 7.041167 GGCATAAATATCACATTGTGCTGTAGA 60.041 37.037 12.04 0.00 41.59 2.59
2610 2894 8.509690 GCATAAATATCACATTGTGCTGTAGAT 58.490 33.333 12.04 2.17 39.61 1.98
2646 3082 8.999220 AATTTGGTTTTTCATTTTGCACATTT 57.001 23.077 0.00 0.00 0.00 2.32
2651 3094 8.133627 TGGTTTTTCATTTTGCACATTTAATGG 58.866 29.630 9.88 0.03 33.60 3.16
2652 3095 7.594386 GGTTTTTCATTTTGCACATTTAATGGG 59.406 33.333 9.88 6.34 36.54 4.00
2658 3101 7.933577 TCATTTTGCACATTTAATGGGTACAAA 59.066 29.630 9.08 8.61 35.65 2.83
2710 3153 3.181465 GCCTGCTTATTGCCTACTGTAGA 60.181 47.826 16.22 0.00 42.00 2.59
2738 3181 5.604565 TCTGACAATCTGATGCGTTCATAT 58.395 37.500 0.00 0.00 32.72 1.78
3037 3484 5.106277 GGGGTATGCTTCTACTTGTTTTCAC 60.106 44.000 0.00 0.00 0.00 3.18
3105 3552 5.653330 TCATTATTGATGTGATGTGGCTGTT 59.347 36.000 0.00 0.00 37.06 3.16
3131 3578 8.971032 AGAGAATCCAATATAATCTCTCCTGT 57.029 34.615 0.00 0.00 42.28 4.00
3147 3594 1.668419 CTGTACCCTGCTTACATGCC 58.332 55.000 0.00 0.00 0.00 4.40
3296 3763 1.140852 CTCCTGTGGTGTCCAGTTTGA 59.859 52.381 0.00 0.00 32.34 2.69
3299 3766 2.643551 CTGTGGTGTCCAGTTTGAACT 58.356 47.619 0.00 0.00 40.60 3.01
3308 3775 9.747898 TGGTGTCCAGTTTGAACTTTAATATAT 57.252 29.630 0.00 0.00 37.08 0.86
3420 3887 1.138069 TCTCTTGCACCACAAAGTCGA 59.862 47.619 0.00 0.00 37.96 4.20
3468 3935 5.775686 TGTATACCCCGATCTGTAAAATCG 58.224 41.667 0.00 0.00 44.29 3.34
3482 3949 9.877178 ATCTGTAAAATCGATGTTACTTTCTCT 57.123 29.630 29.67 12.55 32.51 3.10
3613 4080 7.864379 CGTATCGATGTTGTTAAGGTACCTAAT 59.136 37.037 16.67 2.53 0.00 1.73
3750 4219 6.352516 ACATTCTATGGACCAAAGAAGCTAG 58.647 40.000 0.00 0.00 33.05 3.42
3981 4454 5.592688 TCTGCTAAAAACTAGCTTTTGGTGT 59.407 36.000 12.99 0.00 40.95 4.16
4026 4499 3.684413 GCGGAGGTATTTTGGATGAGGAA 60.684 47.826 0.00 0.00 0.00 3.36
4030 4503 6.204882 CGGAGGTATTTTGGATGAGGAATTAC 59.795 42.308 0.00 0.00 0.00 1.89
4046 4519 7.054491 AGGAATTACTGTGTGCTTTCATTTT 57.946 32.000 0.00 0.00 0.00 1.82
4059 4532 8.509690 TGTGCTTTCATTTTGAACAAAATTGAA 58.490 25.926 18.77 19.57 45.67 2.69
4060 4533 9.002080 GTGCTTTCATTTTGAACAAAATTGAAG 57.998 29.630 23.10 23.10 45.67 3.02
4160 4633 2.142292 GATGGTGTGGGCTTCAGGGT 62.142 60.000 0.00 0.00 0.00 4.34
4181 4654 4.155449 GTGTTCGCGAATTGCAGATAAAA 58.845 39.130 26.23 0.00 46.97 1.52
4216 4689 7.484959 GCTTGATAGGTAATGTTTGCAACTAAC 59.515 37.037 0.00 0.00 0.00 2.34
4269 4742 2.404559 TGGCCAGTACCAGGGTATTAG 58.595 52.381 0.00 0.00 33.75 1.73
4285 4758 5.451381 GGGTATTAGTGCTTTGGTATTTGGC 60.451 44.000 0.00 0.00 0.00 4.52
4309 4782 7.227314 GGCACAGATATGTTATCTTCATGACAA 59.773 37.037 0.00 0.00 32.57 3.18
4326 4799 8.153479 TCATGACAAGCAACCATATATAACAC 57.847 34.615 0.00 0.00 0.00 3.32
4486 4959 2.520069 CCATCTAGCGACCCTGATAGT 58.480 52.381 0.00 0.00 0.00 2.12
4490 4963 2.105993 TCTAGCGACCCTGATAGTAGCA 59.894 50.000 0.00 0.00 38.20 3.49
4502 4975 5.010112 CCTGATAGTAGCATCGAGGAAGAAA 59.990 44.000 0.00 0.00 30.76 2.52
4504 4977 7.055667 TGATAGTAGCATCGAGGAAGAAAAT 57.944 36.000 0.00 0.00 0.00 1.82
4536 5009 3.912694 GCGAGTTGCATTTAAGAGTACG 58.087 45.455 0.00 0.00 45.45 3.67
4734 5215 0.805322 CAGCTCTGCGTGATCCAGTC 60.805 60.000 0.00 0.00 0.00 3.51
4767 5248 7.350467 CGACATTATGTTTCTTGGATGATCTG 58.650 38.462 0.00 0.00 0.00 2.90
4777 5258 4.781621 TCTTGGATGATCTGATAGGGATGG 59.218 45.833 0.00 0.00 0.00 3.51
4829 5310 4.848357 TGAGAATGATTCAGGAAACCTCC 58.152 43.478 8.03 0.00 42.81 4.30
4831 5312 5.222109 TGAGAATGATTCAGGAAACCTCCAA 60.222 40.000 8.03 0.00 45.24 3.53
4842 5323 4.901250 AGGAAACCTCCAATGAAATGTTGT 59.099 37.500 0.00 0.00 45.24 3.32
4905 5386 4.290155 GTCGTCTTGCAATGTTTGATTGT 58.710 39.130 0.00 0.00 0.00 2.71
4937 5418 6.647334 TTGTGCAAGGAGTATCAAATTCAA 57.353 33.333 0.00 0.00 36.25 2.69
4969 5450 7.962373 GCCAAGTTTTATTAAACATGCCAATTC 59.038 33.333 9.77 0.00 44.88 2.17
4978 5459 4.525912 AACATGCCAATTCTGAAGGAAC 57.474 40.909 0.00 0.00 36.70 3.62
4980 5461 4.922206 ACATGCCAATTCTGAAGGAACTA 58.078 39.130 0.00 0.00 38.49 2.24
5016 5497 7.014615 ACAGCCAAGAAGAAAACATACATCTTT 59.985 33.333 0.00 0.00 33.73 2.52
5017 5498 7.869429 CAGCCAAGAAGAAAACATACATCTTTT 59.131 33.333 0.00 0.00 33.73 2.27
5018 5499 8.424133 AGCCAAGAAGAAAACATACATCTTTTT 58.576 29.630 0.00 0.00 33.73 1.94
5041 5522 4.916358 GAGGGAAGGCCATCATGG 57.084 61.111 10.67 0.00 44.29 3.66
5060 5541 4.617253 TGGCTACATCTTACAACAGTGT 57.383 40.909 0.00 0.00 42.09 3.55
5096 5577 0.750249 CAACAAACCACTTCACCCCC 59.250 55.000 0.00 0.00 0.00 5.40
5116 5597 5.187576 CCCCCGCCATATTTGATCAATTTAT 59.812 40.000 9.40 7.22 0.00 1.40
5117 5598 6.379703 CCCCCGCCATATTTGATCAATTTATA 59.620 38.462 9.40 4.92 0.00 0.98
5118 5599 7.069826 CCCCCGCCATATTTGATCAATTTATAT 59.930 37.037 9.40 7.10 0.00 0.86
5119 5600 9.130661 CCCCGCCATATTTGATCAATTTATATA 57.869 33.333 9.40 4.17 0.00 0.86
5214 5734 1.078497 CTGCTCGCCAACCACCATA 60.078 57.895 0.00 0.00 0.00 2.74
5227 5747 2.280552 ACCATACCACGTGTCCGCT 61.281 57.895 15.65 0.00 37.70 5.52
5253 5773 2.511600 CCGCCGATGACCAAGACC 60.512 66.667 0.00 0.00 0.00 3.85
5254 5774 2.264480 CGCCGATGACCAAGACCA 59.736 61.111 0.00 0.00 0.00 4.02
5287 5807 1.101049 CCGACAAAGTGGGTGTTGCT 61.101 55.000 0.00 0.00 0.00 3.91
5307 5827 7.230510 TGTTGCTACTATTGTGAAAAGTTGGAT 59.769 33.333 0.00 0.00 0.00 3.41
5337 5857 7.329962 TGCAATTCTTAAGATGCATCACAAAAG 59.670 33.333 27.81 21.59 43.32 2.27
5338 5858 7.201496 GCAATTCTTAAGATGCATCACAAAAGG 60.201 37.037 27.81 10.62 38.63 3.11
5339 5859 6.899393 TTCTTAAGATGCATCACAAAAGGT 57.101 33.333 27.81 2.07 0.00 3.50
5350 5871 5.005682 GCATCACAAAAGGTCAACTTGTTTC 59.994 40.000 0.00 0.00 39.96 2.78
5366 5887 2.125552 TCGCAAGCGACCATGGAG 60.126 61.111 21.47 13.19 44.01 3.86
5371 5892 1.081892 CAAGCGACCATGGAGTCTTG 58.918 55.000 21.47 21.14 34.46 3.02
5372 5893 0.674895 AAGCGACCATGGAGTCTTGC 60.675 55.000 21.47 11.63 34.46 4.01
5373 5894 2.109126 GCGACCATGGAGTCTTGCC 61.109 63.158 21.47 0.00 34.46 4.52
5374 5895 1.599047 CGACCATGGAGTCTTGCCT 59.401 57.895 21.47 0.00 34.46 4.75
5375 5896 0.036010 CGACCATGGAGTCTTGCCTT 60.036 55.000 21.47 0.00 34.46 4.35
5376 5897 1.743996 GACCATGGAGTCTTGCCTTC 58.256 55.000 21.47 0.00 33.79 3.46
5377 5898 0.329596 ACCATGGAGTCTTGCCTTCC 59.670 55.000 21.47 0.00 0.00 3.46
5378 5899 0.394899 CCATGGAGTCTTGCCTTCCC 60.395 60.000 5.56 0.00 0.00 3.97
5379 5900 0.745845 CATGGAGTCTTGCCTTCCCG 60.746 60.000 0.00 0.00 0.00 5.14
5380 5901 1.201429 ATGGAGTCTTGCCTTCCCGT 61.201 55.000 0.00 0.00 0.00 5.28
5381 5902 1.375326 GGAGTCTTGCCTTCCCGTT 59.625 57.895 0.00 0.00 0.00 4.44
5382 5903 0.955919 GGAGTCTTGCCTTCCCGTTG 60.956 60.000 0.00 0.00 0.00 4.10
5383 5904 0.034896 GAGTCTTGCCTTCCCGTTGA 59.965 55.000 0.00 0.00 0.00 3.18
5384 5905 0.035458 AGTCTTGCCTTCCCGTTGAG 59.965 55.000 0.00 0.00 0.00 3.02
5385 5906 0.034896 GTCTTGCCTTCCCGTTGAGA 59.965 55.000 0.00 0.00 0.00 3.27
5386 5907 0.321671 TCTTGCCTTCCCGTTGAGAG 59.678 55.000 0.00 0.00 0.00 3.20
5387 5908 0.035458 CTTGCCTTCCCGTTGAGAGT 59.965 55.000 0.00 0.00 0.00 3.24
5388 5909 0.034896 TTGCCTTCCCGTTGAGAGTC 59.965 55.000 0.00 0.00 0.00 3.36
5389 5910 0.832135 TGCCTTCCCGTTGAGAGTCT 60.832 55.000 0.00 0.00 0.00 3.24
5390 5911 0.108567 GCCTTCCCGTTGAGAGTCTC 60.109 60.000 13.56 13.56 0.00 3.36
5391 5912 1.551452 CCTTCCCGTTGAGAGTCTCT 58.449 55.000 20.64 0.70 0.00 3.10
5392 5913 1.474879 CCTTCCCGTTGAGAGTCTCTC 59.525 57.143 21.13 21.13 43.65 3.20
5393 5914 1.131504 CTTCCCGTTGAGAGTCTCTCG 59.868 57.143 22.11 21.50 46.25 4.04
5394 5915 0.036448 TCCCGTTGAGAGTCTCTCGT 59.964 55.000 22.11 0.00 46.25 4.18
5395 5916 0.169230 CCCGTTGAGAGTCTCTCGTG 59.831 60.000 22.11 14.68 46.25 4.35
5396 5917 1.157585 CCGTTGAGAGTCTCTCGTGA 58.842 55.000 22.11 10.08 46.25 4.35
5397 5918 1.535896 CCGTTGAGAGTCTCTCGTGAA 59.464 52.381 22.11 10.46 46.25 3.18
5398 5919 2.576406 CGTTGAGAGTCTCTCGTGAAC 58.424 52.381 22.11 18.89 46.25 3.18
5399 5920 2.224549 CGTTGAGAGTCTCTCGTGAACT 59.775 50.000 22.11 3.18 46.25 3.01
5400 5921 3.665848 CGTTGAGAGTCTCTCGTGAACTC 60.666 52.174 22.11 15.70 46.25 3.01
5401 5922 2.070028 TGAGAGTCTCTCGTGAACTCG 58.930 52.381 22.11 0.00 46.25 4.18
5402 5923 2.288886 TGAGAGTCTCTCGTGAACTCGA 60.289 50.000 22.11 1.56 46.25 4.04
5408 5929 3.379445 TCGTGAACTCGAGGCCCC 61.379 66.667 18.41 3.13 34.85 5.80
5409 5930 3.691342 CGTGAACTCGAGGCCCCA 61.691 66.667 18.41 5.83 0.00 4.96
5410 5931 2.747686 GTGAACTCGAGGCCCCAA 59.252 61.111 18.41 0.00 0.00 4.12
5411 5932 1.671379 GTGAACTCGAGGCCCCAAC 60.671 63.158 18.41 2.47 0.00 3.77
5412 5933 2.046217 GAACTCGAGGCCCCAACC 60.046 66.667 18.41 0.00 0.00 3.77
5413 5934 3.623703 GAACTCGAGGCCCCAACCC 62.624 68.421 18.41 0.00 0.00 4.11
5417 5938 4.547367 CGAGGCCCCAACCCGATC 62.547 72.222 0.00 0.00 0.00 3.69
5418 5939 4.191015 GAGGCCCCAACCCGATCC 62.191 72.222 0.00 0.00 0.00 3.36
5422 5943 3.021263 CCCCAACCCGATCCCCTT 61.021 66.667 0.00 0.00 0.00 3.95
5423 5944 2.622447 CCCCAACCCGATCCCCTTT 61.622 63.158 0.00 0.00 0.00 3.11
5424 5945 1.076995 CCCAACCCGATCCCCTTTC 60.077 63.158 0.00 0.00 0.00 2.62
5425 5946 1.571773 CCCAACCCGATCCCCTTTCT 61.572 60.000 0.00 0.00 0.00 2.52
5426 5947 0.331616 CCAACCCGATCCCCTTTCTT 59.668 55.000 0.00 0.00 0.00 2.52
5427 5948 1.682087 CCAACCCGATCCCCTTTCTTC 60.682 57.143 0.00 0.00 0.00 2.87
5428 5949 1.282157 CAACCCGATCCCCTTTCTTCT 59.718 52.381 0.00 0.00 0.00 2.85
5429 5950 1.205055 ACCCGATCCCCTTTCTTCTC 58.795 55.000 0.00 0.00 0.00 2.87
5430 5951 0.470341 CCCGATCCCCTTTCTTCTCC 59.530 60.000 0.00 0.00 0.00 3.71
5431 5952 0.105039 CCGATCCCCTTTCTTCTCCG 59.895 60.000 0.00 0.00 0.00 4.63
5432 5953 0.105039 CGATCCCCTTTCTTCTCCGG 59.895 60.000 0.00 0.00 0.00 5.14
5433 5954 1.497161 GATCCCCTTTCTTCTCCGGA 58.503 55.000 2.93 2.93 0.00 5.14
5434 5955 1.414550 GATCCCCTTTCTTCTCCGGAG 59.585 57.143 26.32 26.32 0.00 4.63
5447 5968 2.125269 CGGAGGTAAGCCCAACCG 60.125 66.667 0.00 0.00 44.48 4.44
5448 5969 2.271173 GGAGGTAAGCCCAACCGG 59.729 66.667 0.00 0.00 42.15 5.28
5449 5970 2.295602 GGAGGTAAGCCCAACCGGA 61.296 63.158 9.46 0.00 42.15 5.14
5450 5971 1.632965 GGAGGTAAGCCCAACCGGAT 61.633 60.000 9.46 0.00 42.15 4.18
5451 5972 0.179054 GAGGTAAGCCCAACCGGATC 60.179 60.000 9.46 0.00 42.15 3.36
5452 5973 0.912487 AGGTAAGCCCAACCGGATCA 60.912 55.000 9.46 0.00 42.15 2.92
5453 5974 0.463833 GGTAAGCCCAACCGGATCAG 60.464 60.000 9.46 0.00 0.00 2.90
5454 5975 0.539986 GTAAGCCCAACCGGATCAGA 59.460 55.000 9.46 0.00 0.00 3.27
5455 5976 0.830648 TAAGCCCAACCGGATCAGAG 59.169 55.000 9.46 0.00 0.00 3.35
5456 5977 0.909610 AAGCCCAACCGGATCAGAGA 60.910 55.000 9.46 0.00 0.00 3.10
5457 5978 0.692419 AGCCCAACCGGATCAGAGAT 60.692 55.000 9.46 0.00 0.00 2.75
5458 5979 0.533755 GCCCAACCGGATCAGAGATG 60.534 60.000 9.46 0.00 0.00 2.90
5459 5980 0.107456 CCCAACCGGATCAGAGATGG 59.893 60.000 9.46 2.98 0.00 3.51
5460 5981 0.107456 CCAACCGGATCAGAGATGGG 59.893 60.000 9.46 0.00 0.00 4.00
5461 5982 1.123077 CAACCGGATCAGAGATGGGA 58.877 55.000 9.46 0.00 0.00 4.37
5462 5983 1.069823 CAACCGGATCAGAGATGGGAG 59.930 57.143 9.46 0.00 0.00 4.30
5463 5984 0.558220 ACCGGATCAGAGATGGGAGA 59.442 55.000 9.46 0.00 0.00 3.71
5464 5985 1.255882 CCGGATCAGAGATGGGAGAG 58.744 60.000 0.00 0.00 0.00 3.20
5465 5986 1.255882 CGGATCAGAGATGGGAGAGG 58.744 60.000 0.00 0.00 0.00 3.69
5466 5987 1.480312 CGGATCAGAGATGGGAGAGGT 60.480 57.143 0.00 0.00 0.00 3.85
5467 5988 1.969923 GGATCAGAGATGGGAGAGGTG 59.030 57.143 0.00 0.00 0.00 4.00
5468 5989 1.344114 GATCAGAGATGGGAGAGGTGC 59.656 57.143 0.00 0.00 0.00 5.01
5469 5990 1.039785 TCAGAGATGGGAGAGGTGCG 61.040 60.000 0.00 0.00 0.00 5.34
5470 5991 1.039785 CAGAGATGGGAGAGGTGCGA 61.040 60.000 0.00 0.00 0.00 5.10
5471 5992 0.754957 AGAGATGGGAGAGGTGCGAG 60.755 60.000 0.00 0.00 0.00 5.03
5472 5993 1.743321 GAGATGGGAGAGGTGCGAGG 61.743 65.000 0.00 0.00 0.00 4.63
5473 5994 2.765807 ATGGGAGAGGTGCGAGGG 60.766 66.667 0.00 0.00 0.00 4.30
5475 5996 4.779733 GGGAGAGGTGCGAGGGGA 62.780 72.222 0.00 0.00 0.00 4.81
5476 5997 2.683933 GGAGAGGTGCGAGGGGAA 60.684 66.667 0.00 0.00 0.00 3.97
5477 5998 2.066999 GGAGAGGTGCGAGGGGAAT 61.067 63.158 0.00 0.00 0.00 3.01
5478 5999 1.627297 GGAGAGGTGCGAGGGGAATT 61.627 60.000 0.00 0.00 0.00 2.17
5479 6000 0.179070 GAGAGGTGCGAGGGGAATTC 60.179 60.000 0.00 0.00 0.00 2.17
5480 6001 0.618968 AGAGGTGCGAGGGGAATTCT 60.619 55.000 5.23 0.00 0.00 2.40
5481 6002 0.253327 GAGGTGCGAGGGGAATTCTT 59.747 55.000 5.23 0.00 0.00 2.52
5482 6003 0.035056 AGGTGCGAGGGGAATTCTTG 60.035 55.000 5.23 0.00 0.00 3.02
5483 6004 0.322546 GGTGCGAGGGGAATTCTTGT 60.323 55.000 5.23 0.00 0.00 3.16
5484 6005 0.804989 GTGCGAGGGGAATTCTTGTG 59.195 55.000 5.23 0.00 0.00 3.33
5485 6006 0.690192 TGCGAGGGGAATTCTTGTGA 59.310 50.000 5.23 0.00 0.00 3.58
5486 6007 1.073125 TGCGAGGGGAATTCTTGTGAA 59.927 47.619 5.23 0.00 36.54 3.18
5487 6008 2.290896 TGCGAGGGGAATTCTTGTGAAT 60.291 45.455 5.23 0.00 44.08 2.57
5488 6009 3.054728 TGCGAGGGGAATTCTTGTGAATA 60.055 43.478 5.23 0.00 41.62 1.75
5489 6010 4.137543 GCGAGGGGAATTCTTGTGAATAT 58.862 43.478 5.23 0.00 41.62 1.28
5490 6011 4.580580 GCGAGGGGAATTCTTGTGAATATT 59.419 41.667 5.23 0.00 41.62 1.28
5491 6012 5.763204 GCGAGGGGAATTCTTGTGAATATTA 59.237 40.000 5.23 0.00 41.62 0.98
5492 6013 6.073003 GCGAGGGGAATTCTTGTGAATATTAG 60.073 42.308 5.23 0.00 41.62 1.73
5493 6014 6.428159 CGAGGGGAATTCTTGTGAATATTAGG 59.572 42.308 5.23 0.00 41.62 2.69
5494 6015 7.226059 AGGGGAATTCTTGTGAATATTAGGT 57.774 36.000 5.23 0.00 41.62 3.08
5495 6016 7.290813 AGGGGAATTCTTGTGAATATTAGGTC 58.709 38.462 5.23 0.00 41.62 3.85
5496 6017 7.129504 AGGGGAATTCTTGTGAATATTAGGTCT 59.870 37.037 5.23 0.00 41.62 3.85
5497 6018 8.437575 GGGGAATTCTTGTGAATATTAGGTCTA 58.562 37.037 5.23 0.00 41.62 2.59
5498 6019 9.495572 GGGAATTCTTGTGAATATTAGGTCTAG 57.504 37.037 5.23 0.00 41.62 2.43
5499 6020 9.495572 GGAATTCTTGTGAATATTAGGTCTAGG 57.504 37.037 5.23 0.00 41.62 3.02
5503 6024 9.667107 TTCTTGTGAATATTAGGTCTAGGTTTG 57.333 33.333 0.00 0.00 0.00 2.93
5504 6025 8.822805 TCTTGTGAATATTAGGTCTAGGTTTGT 58.177 33.333 0.00 0.00 0.00 2.83
5505 6026 8.786826 TTGTGAATATTAGGTCTAGGTTTGTG 57.213 34.615 0.00 0.00 0.00 3.33
5506 6027 7.913789 TGTGAATATTAGGTCTAGGTTTGTGT 58.086 34.615 0.00 0.00 0.00 3.72
5507 6028 8.038944 TGTGAATATTAGGTCTAGGTTTGTGTC 58.961 37.037 0.00 0.00 0.00 3.67
5508 6029 8.258708 GTGAATATTAGGTCTAGGTTTGTGTCT 58.741 37.037 0.00 0.00 0.00 3.41
5509 6030 8.258007 TGAATATTAGGTCTAGGTTTGTGTCTG 58.742 37.037 0.00 0.00 0.00 3.51
5510 6031 2.841442 AGGTCTAGGTTTGTGTCTGC 57.159 50.000 0.00 0.00 0.00 4.26
5511 6032 1.348036 AGGTCTAGGTTTGTGTCTGCC 59.652 52.381 0.00 0.00 0.00 4.85
5512 6033 1.610886 GGTCTAGGTTTGTGTCTGCCC 60.611 57.143 0.00 0.00 0.00 5.36
5513 6034 1.071699 GTCTAGGTTTGTGTCTGCCCA 59.928 52.381 0.00 0.00 0.00 5.36
5514 6035 1.347707 TCTAGGTTTGTGTCTGCCCAG 59.652 52.381 0.00 0.00 0.00 4.45
5515 6036 0.250727 TAGGTTTGTGTCTGCCCAGC 60.251 55.000 0.00 0.00 0.00 4.85
5516 6037 2.639286 GTTTGTGTCTGCCCAGCG 59.361 61.111 0.00 0.00 0.00 5.18
5517 6038 2.594303 TTTGTGTCTGCCCAGCGG 60.594 61.111 0.00 0.00 36.06 5.52
5518 6039 3.414136 TTTGTGTCTGCCCAGCGGT 62.414 57.895 0.00 0.00 36.18 5.68
5519 6040 4.624364 TGTGTCTGCCCAGCGGTG 62.624 66.667 7.86 7.86 36.18 4.94
5520 6041 4.626081 GTGTCTGCCCAGCGGTGT 62.626 66.667 14.40 0.00 36.18 4.16
5521 6042 3.872603 TGTCTGCCCAGCGGTGTT 61.873 61.111 14.40 0.00 36.18 3.32
5522 6043 2.594592 GTCTGCCCAGCGGTGTTT 60.595 61.111 14.40 0.00 36.18 2.83
5523 6044 2.594303 TCTGCCCAGCGGTGTTTG 60.594 61.111 14.40 2.80 36.18 2.93
5524 6045 3.673484 CTGCCCAGCGGTGTTTGG 61.673 66.667 14.40 8.91 0.00 3.28
5528 6049 4.025401 CCAGCGGTGTTTGGCGTC 62.025 66.667 14.40 0.00 0.00 5.19
5529 6050 3.276091 CAGCGGTGTTTGGCGTCA 61.276 61.111 6.41 0.00 0.00 4.35
5530 6051 2.281484 AGCGGTGTTTGGCGTCAT 60.281 55.556 0.00 0.00 0.00 3.06
5531 6052 2.126888 GCGGTGTTTGGCGTCATG 60.127 61.111 0.00 0.00 0.00 3.07
5532 6053 2.126888 CGGTGTTTGGCGTCATGC 60.127 61.111 0.00 0.00 45.38 4.06
5563 6084 4.977126 GCCGACGCCGTATCCGAG 62.977 72.222 0.00 0.00 35.63 4.63
5564 6085 4.977126 CCGACGCCGTATCCGAGC 62.977 72.222 0.00 0.00 35.63 5.03
5565 6086 3.950254 CGACGCCGTATCCGAGCT 61.950 66.667 0.00 0.00 35.63 4.09
5566 6087 2.601398 CGACGCCGTATCCGAGCTA 61.601 63.158 0.00 0.00 35.63 3.32
5567 6088 1.082235 GACGCCGTATCCGAGCTAC 60.082 63.158 0.00 0.00 35.63 3.58
5568 6089 2.127345 CGCCGTATCCGAGCTACG 60.127 66.667 0.00 0.00 41.17 3.51
5569 6090 2.890109 CGCCGTATCCGAGCTACGT 61.890 63.158 5.34 0.00 40.17 3.57
5570 6091 1.370172 GCCGTATCCGAGCTACGTG 60.370 63.158 0.00 0.00 40.17 4.49
5571 6092 1.370172 CCGTATCCGAGCTACGTGC 60.370 63.158 0.00 0.00 40.17 5.34
5581 6102 2.202623 CTACGTGCGGTGGCTCTC 60.203 66.667 0.00 0.00 40.82 3.20
5582 6103 4.111016 TACGTGCGGTGGCTCTCG 62.111 66.667 0.00 0.00 40.82 4.04
5585 6106 4.057428 GTGCGGTGGCTCTCGACT 62.057 66.667 2.44 0.00 40.82 4.18
5586 6107 4.056125 TGCGGTGGCTCTCGACTG 62.056 66.667 2.44 0.00 40.82 3.51
5588 6109 3.753434 CGGTGGCTCTCGACTGCT 61.753 66.667 5.11 0.00 0.00 4.24
5589 6110 2.183046 GGTGGCTCTCGACTGCTC 59.817 66.667 5.11 0.48 0.00 4.26
5590 6111 2.347322 GGTGGCTCTCGACTGCTCT 61.347 63.158 5.11 0.00 0.00 4.09
5591 6112 1.589113 GTGGCTCTCGACTGCTCTT 59.411 57.895 5.11 0.00 0.00 2.85
5592 6113 0.037790 GTGGCTCTCGACTGCTCTTT 60.038 55.000 5.11 0.00 0.00 2.52
5593 6114 0.681733 TGGCTCTCGACTGCTCTTTT 59.318 50.000 5.11 0.00 0.00 2.27
5594 6115 1.337260 TGGCTCTCGACTGCTCTTTTC 60.337 52.381 5.11 0.00 0.00 2.29
5595 6116 1.067213 GGCTCTCGACTGCTCTTTTCT 60.067 52.381 5.11 0.00 0.00 2.52
5596 6117 2.611722 GGCTCTCGACTGCTCTTTTCTT 60.612 50.000 5.11 0.00 0.00 2.52
5597 6118 3.063485 GCTCTCGACTGCTCTTTTCTTT 58.937 45.455 0.00 0.00 0.00 2.52
5598 6119 3.496507 GCTCTCGACTGCTCTTTTCTTTT 59.503 43.478 0.00 0.00 0.00 2.27
5599 6120 4.024472 GCTCTCGACTGCTCTTTTCTTTTT 60.024 41.667 0.00 0.00 0.00 1.94
5617 6138 1.512926 TTTTTGCTCTCGAGAGGTGC 58.487 50.000 36.65 26.50 42.29 5.01
5618 6139 0.667487 TTTTGCTCTCGAGAGGTGCG 60.667 55.000 36.65 17.81 42.29 5.34
5619 6140 1.524008 TTTGCTCTCGAGAGGTGCGA 61.524 55.000 36.65 23.78 42.29 5.10
5620 6141 2.101380 GCTCTCGAGAGGTGCGAC 59.899 66.667 36.65 19.48 42.29 5.19
5621 6142 2.403378 GCTCTCGAGAGGTGCGACT 61.403 63.158 36.65 0.00 42.29 4.18
5622 6143 1.427419 CTCTCGAGAGGTGCGACTG 59.573 63.158 31.01 6.35 38.48 3.51
5623 6144 2.202544 CTCGAGAGGTGCGACTGC 60.203 66.667 6.58 0.00 43.20 4.40
5624 6145 2.673341 TCGAGAGGTGCGACTGCT 60.673 61.111 0.00 0.00 43.34 4.24
5625 6146 2.202544 CGAGAGGTGCGACTGCTC 60.203 66.667 0.00 0.00 43.34 4.26
5626 6147 2.695759 CGAGAGGTGCGACTGCTCT 61.696 63.158 0.00 0.00 43.34 4.09
5627 6148 1.589113 GAGAGGTGCGACTGCTCTT 59.411 57.895 0.00 0.00 43.34 2.85
5628 6149 0.457681 GAGAGGTGCGACTGCTCTTC 60.458 60.000 0.00 0.00 43.34 2.87
5629 6150 0.897863 AGAGGTGCGACTGCTCTTCT 60.898 55.000 0.00 0.00 43.53 2.85
5630 6151 0.037790 GAGGTGCGACTGCTCTTCTT 60.038 55.000 0.00 0.00 43.34 2.52
5631 6152 0.037790 AGGTGCGACTGCTCTTCTTC 60.038 55.000 0.00 0.00 43.34 2.87
5632 6153 0.037790 GGTGCGACTGCTCTTCTTCT 60.038 55.000 0.00 0.00 43.34 2.85
5633 6154 1.606737 GGTGCGACTGCTCTTCTTCTT 60.607 52.381 0.00 0.00 43.34 2.52
5634 6155 1.724082 GTGCGACTGCTCTTCTTCTTC 59.276 52.381 0.00 0.00 43.34 2.87
5635 6156 1.615883 TGCGACTGCTCTTCTTCTTCT 59.384 47.619 0.00 0.00 43.34 2.85
5636 6157 2.820197 TGCGACTGCTCTTCTTCTTCTA 59.180 45.455 0.00 0.00 43.34 2.10
5637 6158 3.175929 GCGACTGCTCTTCTTCTTCTAC 58.824 50.000 0.00 0.00 38.39 2.59
5638 6159 3.765026 CGACTGCTCTTCTTCTTCTACC 58.235 50.000 0.00 0.00 0.00 3.18
5639 6160 3.442273 CGACTGCTCTTCTTCTTCTACCT 59.558 47.826 0.00 0.00 0.00 3.08
5640 6161 4.674101 CGACTGCTCTTCTTCTTCTACCTG 60.674 50.000 0.00 0.00 0.00 4.00
5641 6162 4.156477 ACTGCTCTTCTTCTTCTACCTGT 58.844 43.478 0.00 0.00 0.00 4.00
5642 6163 4.021544 ACTGCTCTTCTTCTTCTACCTGTG 60.022 45.833 0.00 0.00 0.00 3.66
5643 6164 4.152647 TGCTCTTCTTCTTCTACCTGTGA 58.847 43.478 0.00 0.00 0.00 3.58
5644 6165 4.774726 TGCTCTTCTTCTTCTACCTGTGAT 59.225 41.667 0.00 0.00 0.00 3.06
5645 6166 5.108517 GCTCTTCTTCTTCTACCTGTGATG 58.891 45.833 0.00 0.00 0.00 3.07
5646 6167 5.105554 GCTCTTCTTCTTCTACCTGTGATGA 60.106 44.000 0.00 0.00 0.00 2.92
5647 6168 6.406849 GCTCTTCTTCTTCTACCTGTGATGAT 60.407 42.308 0.00 0.00 0.00 2.45
5648 6169 7.106439 TCTTCTTCTTCTACCTGTGATGATC 57.894 40.000 0.00 0.00 0.00 2.92
5649 6170 5.860941 TCTTCTTCTACCTGTGATGATCC 57.139 43.478 0.00 0.00 0.00 3.36
5650 6171 5.272402 TCTTCTTCTACCTGTGATGATCCA 58.728 41.667 0.00 0.00 0.00 3.41
5651 6172 5.901853 TCTTCTTCTACCTGTGATGATCCAT 59.098 40.000 0.00 0.00 0.00 3.41
5652 6173 5.541953 TCTTCTACCTGTGATGATCCATG 57.458 43.478 0.00 0.00 0.00 3.66
5653 6174 4.346127 TCTTCTACCTGTGATGATCCATGG 59.654 45.833 4.97 4.97 0.00 3.66
5654 6175 2.974794 TCTACCTGTGATGATCCATGGG 59.025 50.000 13.02 0.00 0.00 4.00
5655 6176 0.848735 ACCTGTGATGATCCATGGGG 59.151 55.000 13.02 3.99 0.00 4.96
5656 6177 0.111832 CCTGTGATGATCCATGGGGG 59.888 60.000 13.02 0.00 38.37 5.40
5657 6178 0.848735 CTGTGATGATCCATGGGGGT 59.151 55.000 13.02 0.00 38.11 4.95
5658 6179 0.846015 TGTGATGATCCATGGGGGTC 59.154 55.000 13.02 8.71 45.22 4.46
5659 6180 1.143813 GTGATGATCCATGGGGGTCT 58.856 55.000 13.02 0.00 45.24 3.85
5660 6181 2.338809 GTGATGATCCATGGGGGTCTA 58.661 52.381 13.02 0.00 45.24 2.59
5661 6182 2.304180 GTGATGATCCATGGGGGTCTAG 59.696 54.545 13.02 0.00 45.24 2.43
5662 6183 2.182088 TGATGATCCATGGGGGTCTAGA 59.818 50.000 13.02 0.00 45.24 2.43
5663 6184 3.181391 TGATGATCCATGGGGGTCTAGAT 60.181 47.826 13.02 0.00 45.24 1.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
115 121 4.364415 TTTCACTTGGTGTGCTGTTTAC 57.636 40.909 0.00 0.00 45.81 2.01
156 162 7.234355 AGGAGACCAAAAAGATTGTCTGTAAT 58.766 34.615 0.00 0.00 0.00 1.89
164 170 4.589216 TGCAAGGAGACCAAAAAGATTG 57.411 40.909 0.00 0.00 0.00 2.67
223 234 2.667536 GATGCATGCTCGGGCGAT 60.668 61.111 20.33 1.08 42.25 4.58
229 240 0.811219 TCCTTTCCGATGCATGCTCG 60.811 55.000 23.84 23.84 35.92 5.03
332 345 0.249699 ACAAGTGCGATGTCGTTGGA 60.250 50.000 4.20 0.00 42.22 3.53
334 347 3.639222 GACAAGTGCGATGTCGTTG 57.361 52.632 4.20 3.87 42.22 4.10
395 409 2.561733 TGAGTACTTCAGAATCGCGG 57.438 50.000 6.13 0.00 0.00 6.46
460 474 3.189495 GCACCTAGAGTTTCTTTGAAGGC 59.811 47.826 0.00 0.00 0.00 4.35
603 618 0.110486 GTGGAGGTCTTTGCCAAGGA 59.890 55.000 0.00 0.00 32.68 3.36
611 626 3.236003 GACGGCGGTGGAGGTCTTT 62.236 63.158 13.24 0.00 0.00 2.52
642 657 2.261361 CGCGGATGTGTGTCCAGA 59.739 61.111 0.00 0.00 38.21 3.86
697 712 1.004277 AGGCATAGAAGTTTTCGGGCA 59.996 47.619 0.00 0.00 34.02 5.36
735 750 4.034258 GGTGACGTCGCTCGGTCA 62.034 66.667 26.79 0.00 44.69 4.02
750 766 6.054860 ACATCTATGCTAGTTTGTTCAGGT 57.945 37.500 0.00 0.00 0.00 4.00
772 788 4.379143 GGCGAAAACGGTGCCGAC 62.379 66.667 18.16 5.00 42.83 4.79
776 792 1.334288 CGAAATGGCGAAAACGGTGC 61.334 55.000 0.00 0.00 0.00 5.01
777 793 0.727793 CCGAAATGGCGAAAACGGTG 60.728 55.000 0.00 0.00 36.38 4.94
797 980 2.422597 CCTGATAAACGTGTTCTGCCA 58.577 47.619 0.00 0.00 0.00 4.92
798 981 1.130561 GCCTGATAAACGTGTTCTGCC 59.869 52.381 0.00 0.00 0.00 4.85
799 982 1.130561 GGCCTGATAAACGTGTTCTGC 59.869 52.381 0.00 0.00 0.00 4.26
807 990 2.825086 CCTTTTCGGCCTGATAAACG 57.175 50.000 0.00 0.00 0.00 3.60
828 1011 4.648626 GCACTGCACCTGAGCCCA 62.649 66.667 0.00 0.00 0.00 5.36
839 1022 2.413142 GCCCATTGGAGAGCACTGC 61.413 63.158 3.62 0.00 35.03 4.40
865 1052 0.616371 TGGCTACCGGCTGTTGTAAT 59.384 50.000 0.00 0.00 41.46 1.89
869 1056 2.436646 CCTGGCTACCGGCTGTTG 60.437 66.667 0.00 0.00 41.46 3.33
870 1057 4.410400 GCCTGGCTACCGGCTGTT 62.410 66.667 12.43 0.00 39.09 3.16
879 1071 4.408821 CCGCACAAGGCCTGGCTA 62.409 66.667 19.68 0.00 40.31 3.93
980 1172 2.055042 GGAGGCGAGGCAGAGAGAA 61.055 63.158 0.00 0.00 0.00 2.87
983 1175 1.687146 ATTGGAGGCGAGGCAGAGA 60.687 57.895 0.00 0.00 0.00 3.10
987 1180 4.802051 GCCATTGGAGGCGAGGCA 62.802 66.667 6.95 0.00 46.12 4.75
1024 1217 2.668850 TTGGGGAAGGAGAGGAAGAT 57.331 50.000 0.00 0.00 0.00 2.40
1073 1268 3.047877 CGGACGGGTGGTGCTTTC 61.048 66.667 0.00 0.00 34.33 2.62
1326 1538 3.435186 GGCGTCTTCTTGGCCAGC 61.435 66.667 5.11 3.50 46.13 4.85
1480 1717 3.243670 TGCTCTGATAAGCCGATGAAGAG 60.244 47.826 0.00 0.00 41.77 2.85
1482 1719 3.103447 TGCTCTGATAAGCCGATGAAG 57.897 47.619 0.00 0.00 41.77 3.02
1556 1797 1.927210 CATCGAATTCTGCCGACGG 59.073 57.895 10.29 10.29 37.64 4.79
1562 1803 3.111098 GTGATTTGGCATCGAATTCTGC 58.889 45.455 10.43 10.43 37.66 4.26
1563 1804 4.100529 GTGTGATTTGGCATCGAATTCTG 58.899 43.478 3.52 0.00 0.00 3.02
1565 1806 3.119531 TGGTGTGATTTGGCATCGAATTC 60.120 43.478 0.00 0.00 0.00 2.17
1587 1838 3.738830 ACATCACAAGCAAGCAAACAT 57.261 38.095 0.00 0.00 0.00 2.71
1588 1839 4.852134 ATACATCACAAGCAAGCAAACA 57.148 36.364 0.00 0.00 0.00 2.83
1591 1842 4.454161 ACGTAATACATCACAAGCAAGCAA 59.546 37.500 0.00 0.00 0.00 3.91
1592 1843 4.000325 ACGTAATACATCACAAGCAAGCA 59.000 39.130 0.00 0.00 0.00 3.91
1593 1844 4.334443 CACGTAATACATCACAAGCAAGC 58.666 43.478 0.00 0.00 0.00 4.01
1594 1845 4.142924 TGCACGTAATACATCACAAGCAAG 60.143 41.667 0.00 0.00 0.00 4.01
1595 1846 3.748568 TGCACGTAATACATCACAAGCAA 59.251 39.130 0.00 0.00 0.00 3.91
1596 1847 3.124466 GTGCACGTAATACATCACAAGCA 59.876 43.478 0.00 0.00 0.00 3.91
1597 1848 3.370978 AGTGCACGTAATACATCACAAGC 59.629 43.478 12.01 0.00 0.00 4.01
1598 1849 6.641176 TTAGTGCACGTAATACATCACAAG 57.359 37.500 12.01 0.00 0.00 3.16
1599 1850 6.020201 CGATTAGTGCACGTAATACATCACAA 60.020 38.462 12.01 3.55 0.00 3.33
1600 1851 5.457473 CGATTAGTGCACGTAATACATCACA 59.543 40.000 12.01 0.00 0.00 3.58
1601 1852 5.684184 TCGATTAGTGCACGTAATACATCAC 59.316 40.000 12.01 3.07 0.00 3.06
1609 1860 5.459768 TGTAACTTCGATTAGTGCACGTAA 58.540 37.500 12.01 10.78 0.00 3.18
1611 1862 3.904571 TGTAACTTCGATTAGTGCACGT 58.095 40.909 12.01 1.16 0.00 4.49
1612 1863 4.384846 ACTTGTAACTTCGATTAGTGCACG 59.615 41.667 12.01 0.00 0.00 5.34
1613 1864 5.609088 CACTTGTAACTTCGATTAGTGCAC 58.391 41.667 9.40 9.40 0.00 4.57
1621 1872 9.341899 GATAAATTTTGCACTTGTAACTTCGAT 57.658 29.630 0.00 0.00 0.00 3.59
1622 1873 8.564574 AGATAAATTTTGCACTTGTAACTTCGA 58.435 29.630 0.00 0.00 0.00 3.71
1623 1874 8.629986 CAGATAAATTTTGCACTTGTAACTTCG 58.370 33.333 0.00 0.00 0.00 3.79
1624 1875 9.463443 ACAGATAAATTTTGCACTTGTAACTTC 57.537 29.630 0.00 0.00 0.00 3.01
1628 1879 8.572185 TGCTACAGATAAATTTTGCACTTGTAA 58.428 29.630 0.00 0.00 0.00 2.41
1629 1880 8.105097 TGCTACAGATAAATTTTGCACTTGTA 57.895 30.769 0.00 0.00 0.00 2.41
1631 1882 8.470040 AATGCTACAGATAAATTTTGCACTTG 57.530 30.769 0.00 0.00 31.92 3.16
1632 1883 9.573133 GTAATGCTACAGATAAATTTTGCACTT 57.427 29.630 0.00 0.00 31.92 3.16
1634 1885 8.909708 TGTAATGCTACAGATAAATTTTGCAC 57.090 30.769 0.00 0.00 32.93 4.57
1635 1886 9.352784 GTTGTAATGCTACAGATAAATTTTGCA 57.647 29.630 0.00 0.00 39.21 4.08
1636 1887 9.352784 TGTTGTAATGCTACAGATAAATTTTGC 57.647 29.630 0.00 0.00 39.21 3.68
1638 1889 9.855021 GGTGTTGTAATGCTACAGATAAATTTT 57.145 29.630 0.00 0.00 39.21 1.82
1639 1890 9.019656 TGGTGTTGTAATGCTACAGATAAATTT 57.980 29.630 0.00 0.00 39.21 1.82
1640 1891 8.574251 TGGTGTTGTAATGCTACAGATAAATT 57.426 30.769 0.00 0.00 39.21 1.82
1643 1894 6.707290 ACTGGTGTTGTAATGCTACAGATAA 58.293 36.000 0.00 0.00 39.21 1.75
1644 1895 6.294361 ACTGGTGTTGTAATGCTACAGATA 57.706 37.500 0.00 0.00 39.21 1.98
1645 1896 5.165961 ACTGGTGTTGTAATGCTACAGAT 57.834 39.130 0.00 0.00 39.21 2.90
1647 1898 4.143115 CGAACTGGTGTTGTAATGCTACAG 60.143 45.833 0.00 0.00 39.21 2.74
1648 1899 3.743911 CGAACTGGTGTTGTAATGCTACA 59.256 43.478 0.00 0.00 36.39 2.74
1649 1900 3.744426 ACGAACTGGTGTTGTAATGCTAC 59.256 43.478 0.00 0.00 36.39 3.58
1651 1902 2.806244 GACGAACTGGTGTTGTAATGCT 59.194 45.455 0.00 0.00 36.39 3.79
1652 1903 2.806244 AGACGAACTGGTGTTGTAATGC 59.194 45.455 0.00 0.00 36.39 3.56
1653 1904 6.100004 AGATAGACGAACTGGTGTTGTAATG 58.900 40.000 0.00 0.00 36.39 1.90
1654 1905 6.282199 AGATAGACGAACTGGTGTTGTAAT 57.718 37.500 0.00 0.00 36.39 1.89
1657 1908 4.038763 TGAAGATAGACGAACTGGTGTTGT 59.961 41.667 0.00 0.00 36.39 3.32
1658 1909 4.556233 TGAAGATAGACGAACTGGTGTTG 58.444 43.478 0.00 0.00 36.39 3.33
1659 1910 4.866508 TGAAGATAGACGAACTGGTGTT 57.133 40.909 0.00 0.00 39.42 3.32
1660 1911 5.407407 AATGAAGATAGACGAACTGGTGT 57.593 39.130 0.00 0.00 0.00 4.16
1661 1912 5.639506 ACAAATGAAGATAGACGAACTGGTG 59.360 40.000 0.00 0.00 0.00 4.17
1662 1913 5.794894 ACAAATGAAGATAGACGAACTGGT 58.205 37.500 0.00 0.00 0.00 4.00
1663 1914 6.020599 CGTACAAATGAAGATAGACGAACTGG 60.021 42.308 0.00 0.00 0.00 4.00
1664 1915 6.745907 TCGTACAAATGAAGATAGACGAACTG 59.254 38.462 0.00 0.00 35.36 3.16
1665 1916 6.849502 TCGTACAAATGAAGATAGACGAACT 58.150 36.000 0.00 0.00 35.36 3.01
1666 1917 7.681125 ATCGTACAAATGAAGATAGACGAAC 57.319 36.000 0.00 0.00 40.93 3.95
1667 1918 9.961265 ATAATCGTACAAATGAAGATAGACGAA 57.039 29.630 0.00 0.00 40.93 3.85
1678 1929 9.757227 TGTCATGTCATATAATCGTACAAATGA 57.243 29.630 0.00 0.00 0.00 2.57
1681 1932 9.372369 TGTTGTCATGTCATATAATCGTACAAA 57.628 29.630 0.00 0.00 0.00 2.83
1682 1933 8.934507 TGTTGTCATGTCATATAATCGTACAA 57.065 30.769 0.00 0.00 0.00 2.41
1714 1965 1.872952 TGCTCACACAGGATTCAAACG 59.127 47.619 0.00 0.00 0.00 3.60
1720 1971 3.326006 TCTTCTTCTGCTCACACAGGATT 59.674 43.478 0.00 0.00 38.26 3.01
1861 2112 1.754226 AGCTTCTCCCTTAGCTCTTCG 59.246 52.381 0.00 0.00 44.05 3.79
1921 2172 1.927174 CGAGAGCCAGGATTGTTTACG 59.073 52.381 0.00 0.00 0.00 3.18
1941 2192 0.031178 GCATCAATCGATTGGGGCAC 59.969 55.000 31.71 18.92 38.30 5.01
1943 2194 0.963962 ATGCATCAATCGATTGGGGC 59.036 50.000 32.03 31.34 38.30 5.80
2084 2335 3.880047 ATCACAAGCACAATGGGATTG 57.120 42.857 12.32 12.32 37.67 2.67
2087 2338 3.760738 TGTTATCACAAGCACAATGGGA 58.239 40.909 0.00 0.00 34.10 4.37
2093 2344 4.203226 TCACCTTTGTTATCACAAGCACA 58.797 39.130 0.00 0.00 43.92 4.57
2099 2350 6.478344 GCACAAAATTCACCTTTGTTATCACA 59.522 34.615 0.00 0.00 42.86 3.58
2120 2371 3.544684 ACTGAGAACTTGACAATGCACA 58.455 40.909 0.00 0.00 0.00 4.57
2123 2374 4.752101 ACAGTACTGAGAACTTGACAATGC 59.248 41.667 29.30 0.00 0.00 3.56
2148 2399 4.187694 AGCTTTAGTTATCTGACAGCAGC 58.812 43.478 0.00 0.00 42.01 5.25
2165 2416 4.040461 TCAACCTACAGAACAGCTAGCTTT 59.960 41.667 16.46 12.86 0.00 3.51
2176 2429 4.689062 AGGAAGGAGATCAACCTACAGAA 58.311 43.478 11.04 0.00 36.67 3.02
2278 2531 3.569200 AAAACTCAGCGGGGGAGGC 62.569 63.158 0.00 0.00 36.70 4.70
2279 2532 1.377333 GAAAACTCAGCGGGGGAGG 60.377 63.158 0.00 0.00 36.70 4.30
2280 2533 1.377333 GGAAAACTCAGCGGGGGAG 60.377 63.158 0.00 0.00 38.36 4.30
2281 2534 1.423794 AAGGAAAACTCAGCGGGGGA 61.424 55.000 0.00 0.00 0.00 4.81
2282 2535 0.539669 AAAGGAAAACTCAGCGGGGG 60.540 55.000 0.00 0.00 0.00 5.40
2283 2536 0.881796 GAAAGGAAAACTCAGCGGGG 59.118 55.000 0.00 0.00 0.00 5.73
2344 2628 1.411246 AGGACACTACGCACACAAAGA 59.589 47.619 0.00 0.00 0.00 2.52
2500 2784 6.095160 AGAGAATGAAAATGCAGTCAGGATTC 59.905 38.462 0.00 0.00 37.28 2.52
2522 2806 1.988293 TCTCGGGCCTGATAAGAGAG 58.012 55.000 16.52 0.95 33.58 3.20
2569 2853 3.552132 TTATGCCTTGGTCGCAATAGA 57.448 42.857 0.00 0.00 40.22 1.98
2575 2859 3.563808 TGTGATATTTATGCCTTGGTCGC 59.436 43.478 0.00 0.00 0.00 5.19
2581 2865 6.097270 ACAGCACAATGTGATATTTATGCCTT 59.903 34.615 18.66 0.00 35.23 4.35
2621 3057 8.999220 AAATGTGCAAAATGAAAAACCAAATT 57.001 23.077 0.00 0.00 0.00 1.82
2627 3063 8.134261 ACCCATTAAATGTGCAAAATGAAAAAC 58.866 29.630 0.00 0.00 0.00 2.43
2658 3101 4.385825 TCGTACTGCTTGGATTGTCTTTT 58.614 39.130 0.00 0.00 0.00 2.27
2670 3113 2.233922 AGGCATGTTACTCGTACTGCTT 59.766 45.455 0.00 0.00 0.00 3.91
2672 3115 1.927174 CAGGCATGTTACTCGTACTGC 59.073 52.381 0.00 0.00 0.00 4.40
2710 3153 7.381323 TGAACGCATCAGATTGTCAGATATAT 58.619 34.615 0.00 0.00 33.04 0.86
2738 3181 5.772672 ACATTTGCTGAACCCTGTAACAATA 59.227 36.000 0.00 0.00 0.00 1.90
2848 3294 4.751600 GCACGATGAAGATATGGATGAACA 59.248 41.667 0.00 0.00 0.00 3.18
2855 3301 7.063898 CCAACTATTAGCACGATGAAGATATGG 59.936 40.741 0.00 0.00 0.00 2.74
3099 3546 9.377312 GAGATTATATTGGATTCTCTAACAGCC 57.623 37.037 0.00 0.00 32.07 4.85
3131 3578 2.224892 TGTTTGGCATGTAAGCAGGGTA 60.225 45.455 0.00 0.00 35.83 3.69
3147 3594 3.102052 AGGTGAGCAGCATTTTGTTTG 57.898 42.857 0.00 0.00 0.00 2.93
3175 3622 8.109634 TGGAGATTTAAGGCATCTAATTATCCC 58.890 37.037 0.00 0.00 30.70 3.85
3176 3623 9.692325 ATGGAGATTTAAGGCATCTAATTATCC 57.308 33.333 0.00 0.00 30.70 2.59
3234 3701 8.879759 CACTTATCCGTGTCATTTAAATGTACT 58.120 33.333 23.95 12.88 37.65 2.73
3420 3887 2.041216 AGGAAAACATCGCCCCTTTAGT 59.959 45.455 0.00 0.00 0.00 2.24
3468 3935 7.692705 GTGCGGAAATTTAGAGAAAGTAACATC 59.307 37.037 0.00 0.00 0.00 3.06
3482 3949 8.561738 AAGAAAGAGATTAGTGCGGAAATTTA 57.438 30.769 0.00 0.00 0.00 1.40
3933 4406 0.249398 GTTACATGCGGTGGGACTCT 59.751 55.000 0.00 0.00 0.00 3.24
4026 4499 7.264221 TGTTCAAAATGAAAGCACACAGTAAT 58.736 30.769 0.00 0.00 38.22 1.89
4030 4503 6.406093 TTTGTTCAAAATGAAAGCACACAG 57.594 33.333 0.00 0.00 38.22 3.66
4046 4519 4.109050 GACAACGGCTTCAATTTTGTTCA 58.891 39.130 0.00 0.00 30.60 3.18
4059 4532 3.020984 TGAAAAGAAAAGGACAACGGCT 58.979 40.909 0.00 0.00 0.00 5.52
4060 4533 3.113322 GTGAAAAGAAAAGGACAACGGC 58.887 45.455 0.00 0.00 0.00 5.68
4160 4633 4.411993 TTTTATCTGCAATTCGCGAACA 57.588 36.364 26.00 16.73 46.97 3.18
4216 4689 2.165030 CTGCAAAGCTAAGACCCCAATG 59.835 50.000 0.00 0.00 0.00 2.82
4220 4693 0.609131 TGCTGCAAAGCTAAGACCCC 60.609 55.000 0.00 0.00 35.49 4.95
4285 4758 8.281194 GCTTGTCATGAAGATAACATATCTGTG 58.719 37.037 0.00 2.33 35.22 3.66
4287 4760 8.374327 TGCTTGTCATGAAGATAACATATCTG 57.626 34.615 0.00 0.00 0.00 2.90
4288 4761 8.834465 GTTGCTTGTCATGAAGATAACATATCT 58.166 33.333 0.00 0.00 0.00 1.98
4289 4762 8.072567 GGTTGCTTGTCATGAAGATAACATATC 58.927 37.037 0.00 0.00 0.00 1.63
4375 4848 5.420104 CAGGAAAGAAGGTGCCAATAAATCT 59.580 40.000 0.00 0.00 0.00 2.40
4486 4959 4.191544 CACCATTTTCTTCCTCGATGCTA 58.808 43.478 0.00 0.00 0.00 3.49
4490 4963 2.290896 TGCCACCATTTTCTTCCTCGAT 60.291 45.455 0.00 0.00 0.00 3.59
4502 4975 2.360350 CTCGCCACTGCCACCATT 60.360 61.111 0.00 0.00 0.00 3.16
4504 4977 3.872603 AACTCGCCACTGCCACCA 61.873 61.111 0.00 0.00 0.00 4.17
4536 5009 1.607251 CCTCGACTGGTTTGGGTACAC 60.607 57.143 0.00 0.00 0.00 2.90
4579 5052 2.126189 GACGCCGCTTTACCGACT 60.126 61.111 0.00 0.00 0.00 4.18
4734 5215 0.746563 AACATAATGTCGGGGGCGTG 60.747 55.000 0.00 0.00 0.00 5.34
4738 5219 2.687935 CCAAGAAACATAATGTCGGGGG 59.312 50.000 0.00 0.00 0.00 5.40
4767 5248 7.344352 AGCTAGAACTATGAATCCATCCCTATC 59.656 40.741 0.00 0.00 34.31 2.08
4777 5258 7.759433 GCTGATCCTAAGCTAGAACTATGAATC 59.241 40.741 0.00 0.00 37.69 2.52
4810 5291 5.653769 TCATTGGAGGTTTCCTGAATCATTC 59.346 40.000 0.00 0.00 44.36 2.67
4829 5310 6.756074 AGTGTAACCACAACAACATTTCATTG 59.244 34.615 0.00 0.00 44.39 2.82
4831 5312 6.463995 AGTGTAACCACAACAACATTTCAT 57.536 33.333 0.00 0.00 44.39 2.57
4842 5323 7.695480 ATATATGCAACAAGTGTAACCACAA 57.305 32.000 0.00 0.00 44.39 3.33
4905 5386 7.109501 TGATACTCCTTGCACAAAATAGCTAA 58.890 34.615 0.00 0.00 0.00 3.09
5019 5500 2.692709 TGATGGCCTTCCCTCAAAAA 57.307 45.000 15.62 0.00 34.64 1.94
5020 5501 2.459644 CATGATGGCCTTCCCTCAAAA 58.540 47.619 15.62 0.00 39.82 2.44
5021 5502 1.342275 CCATGATGGCCTTCCCTCAAA 60.342 52.381 15.62 0.00 39.82 2.69
5022 5503 0.259647 CCATGATGGCCTTCCCTCAA 59.740 55.000 15.62 0.00 39.82 3.02
5023 5504 1.925120 CCATGATGGCCTTCCCTCA 59.075 57.895 15.62 5.71 40.51 3.86
5024 5505 4.916358 CCATGATGGCCTTCCCTC 57.084 61.111 15.62 0.14 0.00 4.30
5033 5514 5.125356 TGTTGTAAGATGTAGCCATGATGG 58.875 41.667 7.21 7.21 41.55 3.51
5034 5515 5.819379 ACTGTTGTAAGATGTAGCCATGATG 59.181 40.000 0.00 0.00 0.00 3.07
5035 5516 5.819379 CACTGTTGTAAGATGTAGCCATGAT 59.181 40.000 0.00 0.00 0.00 2.45
5036 5517 5.178061 CACTGTTGTAAGATGTAGCCATGA 58.822 41.667 0.00 0.00 0.00 3.07
5037 5518 4.937620 ACACTGTTGTAAGATGTAGCCATG 59.062 41.667 0.00 0.00 32.60 3.66
5038 5519 5.165961 ACACTGTTGTAAGATGTAGCCAT 57.834 39.130 0.00 0.00 32.60 4.40
5039 5520 4.617253 ACACTGTTGTAAGATGTAGCCA 57.383 40.909 0.00 0.00 32.60 4.75
5040 5521 6.649557 ACTTTACACTGTTGTAAGATGTAGCC 59.350 38.462 0.00 0.00 46.53 3.93
5041 5522 7.653767 ACTTTACACTGTTGTAAGATGTAGC 57.346 36.000 0.00 0.00 46.53 3.58
5044 5525 9.783256 GAAAAACTTTACACTGTTGTAAGATGT 57.217 29.630 0.00 0.00 46.53 3.06
5060 5541 8.621286 TGGTTTGTTGCAAAAAGAAAAACTTTA 58.379 25.926 0.00 0.00 46.55 1.85
5069 5550 4.688413 GTGAAGTGGTTTGTTGCAAAAAGA 59.312 37.500 0.00 0.00 0.00 2.52
5214 5734 3.379445 CCCTAGCGGACACGTGGT 61.379 66.667 21.57 5.35 43.45 4.16
5270 5790 2.572290 AGTAGCAACACCCACTTTGTC 58.428 47.619 0.00 0.00 0.00 3.18
5271 5791 2.729028 AGTAGCAACACCCACTTTGT 57.271 45.000 0.00 0.00 0.00 2.83
5279 5799 6.313744 ACTTTTCACAATAGTAGCAACACC 57.686 37.500 0.00 0.00 0.00 4.16
5287 5807 8.673711 GCATGTATCCAACTTTTCACAATAGTA 58.326 33.333 0.00 0.00 0.00 1.82
5307 5827 7.067251 TGTGATGCATCTTAAGAATTGCATGTA 59.933 33.333 34.85 25.08 45.45 2.29
5325 5845 3.446873 ACAAGTTGACCTTTTGTGATGCA 59.553 39.130 10.54 0.00 34.04 3.96
5350 5871 2.434884 ACTCCATGGTCGCTTGCG 60.435 61.111 12.58 8.87 0.00 4.85
5358 5879 0.329596 GGAAGGCAAGACTCCATGGT 59.670 55.000 12.58 0.00 0.00 3.55
5366 5887 0.034896 TCTCAACGGGAAGGCAAGAC 59.965 55.000 0.00 0.00 0.00 3.01
5371 5892 0.108567 GAGACTCTCAACGGGAAGGC 60.109 60.000 0.76 0.00 0.00 4.35
5372 5893 1.474879 GAGAGACTCTCAACGGGAAGG 59.525 57.143 24.74 0.00 42.90 3.46
5373 5894 1.131504 CGAGAGACTCTCAACGGGAAG 59.868 57.143 27.81 8.88 43.55 3.46
5374 5895 1.166129 CGAGAGACTCTCAACGGGAA 58.834 55.000 27.81 0.00 43.55 3.97
5375 5896 0.036448 ACGAGAGACTCTCAACGGGA 59.964 55.000 27.81 0.00 43.55 5.14
5376 5897 0.169230 CACGAGAGACTCTCAACGGG 59.831 60.000 27.81 15.12 43.55 5.28
5377 5898 1.157585 TCACGAGAGACTCTCAACGG 58.842 55.000 27.81 16.00 43.55 4.44
5378 5899 2.224549 AGTTCACGAGAGACTCTCAACG 59.775 50.000 27.81 18.86 43.55 4.10
5379 5900 3.665848 CGAGTTCACGAGAGACTCTCAAC 60.666 52.174 27.81 23.19 43.55 3.18
5380 5901 2.480802 CGAGTTCACGAGAGACTCTCAA 59.519 50.000 27.81 14.67 43.55 3.02
5381 5902 2.070028 CGAGTTCACGAGAGACTCTCA 58.930 52.381 27.81 9.70 43.55 3.27
5382 5903 2.339418 TCGAGTTCACGAGAGACTCTC 58.661 52.381 20.73 20.73 40.06 3.20
5383 5904 2.459060 TCGAGTTCACGAGAGACTCT 57.541 50.000 4.14 4.14 37.37 3.24
5391 5912 3.379445 GGGGCCTCGAGTTCACGA 61.379 66.667 12.31 0.00 40.00 4.35
5392 5913 3.234630 TTGGGGCCTCGAGTTCACG 62.235 63.158 12.31 0.00 0.00 4.35
5393 5914 1.671379 GTTGGGGCCTCGAGTTCAC 60.671 63.158 12.31 4.60 0.00 3.18
5394 5915 2.747686 GTTGGGGCCTCGAGTTCA 59.252 61.111 12.31 1.04 0.00 3.18
5395 5916 2.046217 GGTTGGGGCCTCGAGTTC 60.046 66.667 12.31 2.40 0.00 3.01
5396 5917 3.647771 GGGTTGGGGCCTCGAGTT 61.648 66.667 12.31 0.00 0.00 3.01
5400 5921 4.547367 GATCGGGTTGGGGCCTCG 62.547 72.222 0.84 0.39 0.00 4.63
5401 5922 4.191015 GGATCGGGTTGGGGCCTC 62.191 72.222 0.84 0.00 0.00 4.70
5405 5926 2.567664 GAAAGGGGATCGGGTTGGGG 62.568 65.000 0.00 0.00 0.00 4.96
5406 5927 1.076995 GAAAGGGGATCGGGTTGGG 60.077 63.158 0.00 0.00 0.00 4.12
5407 5928 0.331616 AAGAAAGGGGATCGGGTTGG 59.668 55.000 0.00 0.00 0.00 3.77
5408 5929 1.282157 AGAAGAAAGGGGATCGGGTTG 59.718 52.381 0.00 0.00 0.00 3.77
5409 5930 1.560146 GAGAAGAAAGGGGATCGGGTT 59.440 52.381 0.00 0.00 0.00 4.11
5410 5931 1.205055 GAGAAGAAAGGGGATCGGGT 58.795 55.000 0.00 0.00 0.00 5.28
5411 5932 0.470341 GGAGAAGAAAGGGGATCGGG 59.530 60.000 0.00 0.00 0.00 5.14
5412 5933 0.105039 CGGAGAAGAAAGGGGATCGG 59.895 60.000 0.00 0.00 0.00 4.18
5413 5934 0.105039 CCGGAGAAGAAAGGGGATCG 59.895 60.000 0.00 0.00 0.00 3.69
5414 5935 1.414550 CTCCGGAGAAGAAAGGGGATC 59.585 57.143 28.21 0.00 0.00 3.36
5415 5936 1.501582 CTCCGGAGAAGAAAGGGGAT 58.498 55.000 28.21 0.00 0.00 3.85
5416 5937 0.617820 CCTCCGGAGAAGAAAGGGGA 60.618 60.000 33.39 0.00 0.00 4.81
5417 5938 0.910088 ACCTCCGGAGAAGAAAGGGG 60.910 60.000 33.39 15.91 0.00 4.79
5418 5939 1.861982 TACCTCCGGAGAAGAAAGGG 58.138 55.000 33.39 16.68 0.00 3.95
5419 5940 2.418884 GCTTACCTCCGGAGAAGAAAGG 60.419 54.545 33.39 17.48 0.00 3.11
5420 5941 2.418884 GGCTTACCTCCGGAGAAGAAAG 60.419 54.545 33.39 25.73 0.00 2.62
5421 5942 1.553704 GGCTTACCTCCGGAGAAGAAA 59.446 52.381 33.39 18.06 0.00 2.52
5422 5943 1.192428 GGCTTACCTCCGGAGAAGAA 58.808 55.000 33.39 20.30 0.00 2.52
5423 5944 0.686769 GGGCTTACCTCCGGAGAAGA 60.687 60.000 33.39 14.22 35.85 2.87
5424 5945 0.976073 TGGGCTTACCTCCGGAGAAG 60.976 60.000 33.39 27.14 41.11 2.85
5425 5946 0.545787 TTGGGCTTACCTCCGGAGAA 60.546 55.000 33.39 18.60 41.11 2.87
5426 5947 1.079621 TTGGGCTTACCTCCGGAGA 59.920 57.895 33.39 11.37 41.11 3.71
5427 5948 1.221021 GTTGGGCTTACCTCCGGAG 59.779 63.158 25.36 25.36 41.11 4.63
5428 5949 2.295602 GGTTGGGCTTACCTCCGGA 61.296 63.158 2.93 2.93 41.11 5.14
5429 5950 2.271173 GGTTGGGCTTACCTCCGG 59.729 66.667 0.00 0.00 41.11 5.14
5430 5951 2.125269 CGGTTGGGCTTACCTCCG 60.125 66.667 6.92 0.00 45.19 4.63
5431 5952 1.632965 ATCCGGTTGGGCTTACCTCC 61.633 60.000 0.00 0.00 41.11 4.30
5432 5953 0.179054 GATCCGGTTGGGCTTACCTC 60.179 60.000 0.00 0.00 41.11 3.85
5433 5954 0.912487 TGATCCGGTTGGGCTTACCT 60.912 55.000 0.00 0.00 41.11 3.08
5434 5955 0.463833 CTGATCCGGTTGGGCTTACC 60.464 60.000 0.00 0.00 40.81 2.85
5435 5956 0.539986 TCTGATCCGGTTGGGCTTAC 59.460 55.000 0.00 0.00 35.24 2.34
5436 5957 0.830648 CTCTGATCCGGTTGGGCTTA 59.169 55.000 0.00 0.00 35.24 3.09
5437 5958 0.909610 TCTCTGATCCGGTTGGGCTT 60.910 55.000 0.00 0.00 35.24 4.35
5438 5959 0.692419 ATCTCTGATCCGGTTGGGCT 60.692 55.000 0.00 0.00 35.24 5.19
5439 5960 0.533755 CATCTCTGATCCGGTTGGGC 60.534 60.000 0.00 0.00 35.24 5.36
5440 5961 0.107456 CCATCTCTGATCCGGTTGGG 59.893 60.000 0.00 0.00 35.24 4.12
5441 5962 0.107456 CCCATCTCTGATCCGGTTGG 59.893 60.000 0.00 0.00 0.00 3.77
5442 5963 1.069823 CTCCCATCTCTGATCCGGTTG 59.930 57.143 0.00 0.00 0.00 3.77
5443 5964 1.062886 TCTCCCATCTCTGATCCGGTT 60.063 52.381 0.00 0.00 0.00 4.44
5444 5965 0.558220 TCTCCCATCTCTGATCCGGT 59.442 55.000 0.00 0.00 0.00 5.28
5445 5966 1.255882 CTCTCCCATCTCTGATCCGG 58.744 60.000 0.00 0.00 0.00 5.14
5446 5967 1.255882 CCTCTCCCATCTCTGATCCG 58.744 60.000 0.00 0.00 0.00 4.18
5447 5968 1.969923 CACCTCTCCCATCTCTGATCC 59.030 57.143 0.00 0.00 0.00 3.36
5448 5969 1.344114 GCACCTCTCCCATCTCTGATC 59.656 57.143 0.00 0.00 0.00 2.92
5449 5970 1.422531 GCACCTCTCCCATCTCTGAT 58.577 55.000 0.00 0.00 0.00 2.90
5450 5971 1.039785 CGCACCTCTCCCATCTCTGA 61.040 60.000 0.00 0.00 0.00 3.27
5451 5972 1.039785 TCGCACCTCTCCCATCTCTG 61.040 60.000 0.00 0.00 0.00 3.35
5452 5973 0.754957 CTCGCACCTCTCCCATCTCT 60.755 60.000 0.00 0.00 0.00 3.10
5453 5974 1.739049 CTCGCACCTCTCCCATCTC 59.261 63.158 0.00 0.00 0.00 2.75
5454 5975 1.760086 CCTCGCACCTCTCCCATCT 60.760 63.158 0.00 0.00 0.00 2.90
5455 5976 2.801631 CCCTCGCACCTCTCCCATC 61.802 68.421 0.00 0.00 0.00 3.51
5456 5977 2.765807 CCCTCGCACCTCTCCCAT 60.766 66.667 0.00 0.00 0.00 4.00
5458 5979 4.779733 TCCCCTCGCACCTCTCCC 62.780 72.222 0.00 0.00 0.00 4.30
5459 5980 1.627297 AATTCCCCTCGCACCTCTCC 61.627 60.000 0.00 0.00 0.00 3.71
5460 5981 0.179070 GAATTCCCCTCGCACCTCTC 60.179 60.000 0.00 0.00 0.00 3.20
5461 5982 0.618968 AGAATTCCCCTCGCACCTCT 60.619 55.000 0.65 0.00 0.00 3.69
5462 5983 0.253327 AAGAATTCCCCTCGCACCTC 59.747 55.000 0.65 0.00 0.00 3.85
5463 5984 0.035056 CAAGAATTCCCCTCGCACCT 60.035 55.000 0.65 0.00 0.00 4.00
5464 5985 0.322546 ACAAGAATTCCCCTCGCACC 60.323 55.000 0.65 0.00 0.00 5.01
5465 5986 0.804989 CACAAGAATTCCCCTCGCAC 59.195 55.000 0.65 0.00 0.00 5.34
5466 5987 0.690192 TCACAAGAATTCCCCTCGCA 59.310 50.000 0.65 0.00 0.00 5.10
5467 5988 1.821216 TTCACAAGAATTCCCCTCGC 58.179 50.000 0.65 0.00 0.00 5.03
5468 5989 6.428159 CCTAATATTCACAAGAATTCCCCTCG 59.572 42.308 0.65 0.00 41.64 4.63
5469 5990 7.290813 ACCTAATATTCACAAGAATTCCCCTC 58.709 38.462 0.65 0.00 41.64 4.30
5470 5991 7.129504 AGACCTAATATTCACAAGAATTCCCCT 59.870 37.037 0.65 0.00 41.64 4.79
5471 5992 7.290813 AGACCTAATATTCACAAGAATTCCCC 58.709 38.462 0.65 0.00 41.64 4.81
5472 5993 9.495572 CTAGACCTAATATTCACAAGAATTCCC 57.504 37.037 0.65 0.00 41.64 3.97
5473 5994 9.495572 CCTAGACCTAATATTCACAAGAATTCC 57.504 37.037 0.65 0.00 41.64 3.01
5477 5998 9.667107 CAAACCTAGACCTAATATTCACAAGAA 57.333 33.333 0.00 0.00 38.31 2.52
5478 5999 8.822805 ACAAACCTAGACCTAATATTCACAAGA 58.177 33.333 0.00 0.00 0.00 3.02
5479 6000 8.883731 CACAAACCTAGACCTAATATTCACAAG 58.116 37.037 0.00 0.00 0.00 3.16
5480 6001 8.380099 ACACAAACCTAGACCTAATATTCACAA 58.620 33.333 0.00 0.00 0.00 3.33
5481 6002 7.913789 ACACAAACCTAGACCTAATATTCACA 58.086 34.615 0.00 0.00 0.00 3.58
5482 6003 8.258708 AGACACAAACCTAGACCTAATATTCAC 58.741 37.037 0.00 0.00 0.00 3.18
5483 6004 8.258007 CAGACACAAACCTAGACCTAATATTCA 58.742 37.037 0.00 0.00 0.00 2.57
5484 6005 7.224949 GCAGACACAAACCTAGACCTAATATTC 59.775 40.741 0.00 0.00 0.00 1.75
5485 6006 7.048512 GCAGACACAAACCTAGACCTAATATT 58.951 38.462 0.00 0.00 0.00 1.28
5486 6007 6.408206 GGCAGACACAAACCTAGACCTAATAT 60.408 42.308 0.00 0.00 0.00 1.28
5487 6008 5.105064 GGCAGACACAAACCTAGACCTAATA 60.105 44.000 0.00 0.00 0.00 0.98
5488 6009 4.323562 GGCAGACACAAACCTAGACCTAAT 60.324 45.833 0.00 0.00 0.00 1.73
5489 6010 3.007614 GGCAGACACAAACCTAGACCTAA 59.992 47.826 0.00 0.00 0.00 2.69
5490 6011 2.565834 GGCAGACACAAACCTAGACCTA 59.434 50.000 0.00 0.00 0.00 3.08
5491 6012 1.348036 GGCAGACACAAACCTAGACCT 59.652 52.381 0.00 0.00 0.00 3.85
5492 6013 1.610886 GGGCAGACACAAACCTAGACC 60.611 57.143 0.00 0.00 0.00 3.85
5493 6014 1.071699 TGGGCAGACACAAACCTAGAC 59.928 52.381 0.00 0.00 0.00 2.59
5494 6015 1.347707 CTGGGCAGACACAAACCTAGA 59.652 52.381 0.00 0.00 32.87 2.43
5495 6016 1.813513 CTGGGCAGACACAAACCTAG 58.186 55.000 0.00 0.00 0.00 3.02
5496 6017 0.250727 GCTGGGCAGACACAAACCTA 60.251 55.000 0.00 0.00 0.00 3.08
5497 6018 1.529244 GCTGGGCAGACACAAACCT 60.529 57.895 0.00 0.00 0.00 3.50
5498 6019 2.908073 CGCTGGGCAGACACAAACC 61.908 63.158 0.00 0.00 0.00 3.27
5499 6020 2.639286 CGCTGGGCAGACACAAAC 59.361 61.111 0.00 0.00 0.00 2.93
5500 6021 2.594303 CCGCTGGGCAGACACAAA 60.594 61.111 0.00 0.00 0.00 2.83
5501 6022 3.872603 ACCGCTGGGCAGACACAA 61.873 61.111 0.00 0.00 36.48 3.33
5502 6023 4.624364 CACCGCTGGGCAGACACA 62.624 66.667 0.00 0.00 36.48 3.72
5503 6024 4.626081 ACACCGCTGGGCAGACAC 62.626 66.667 0.00 0.00 36.48 3.67
5504 6025 3.414136 AAACACCGCTGGGCAGACA 62.414 57.895 0.00 0.00 36.48 3.41
5505 6026 2.594592 AAACACCGCTGGGCAGAC 60.595 61.111 0.00 0.00 36.48 3.51
5506 6027 2.594303 CAAACACCGCTGGGCAGA 60.594 61.111 0.00 0.00 36.48 4.26
5507 6028 3.673484 CCAAACACCGCTGGGCAG 61.673 66.667 0.00 0.00 36.48 4.85
5511 6032 4.025401 GACGCCAAACACCGCTGG 62.025 66.667 0.00 0.00 35.67 4.85
5512 6033 2.616330 ATGACGCCAAACACCGCTG 61.616 57.895 0.00 0.00 0.00 5.18
5513 6034 2.281484 ATGACGCCAAACACCGCT 60.281 55.556 0.00 0.00 0.00 5.52
5514 6035 2.126888 CATGACGCCAAACACCGC 60.127 61.111 0.00 0.00 0.00 5.68
5515 6036 2.126888 GCATGACGCCAAACACCG 60.127 61.111 0.00 0.00 32.94 4.94
5555 6076 1.370172 CCGCACGTAGCTCGGATAC 60.370 63.158 4.86 0.00 46.10 2.24
5556 6077 1.820906 ACCGCACGTAGCTCGGATA 60.821 57.895 16.85 0.00 46.10 2.59
5557 6078 3.138798 ACCGCACGTAGCTCGGAT 61.139 61.111 16.85 0.00 46.10 4.18
5558 6079 4.111016 CACCGCACGTAGCTCGGA 62.111 66.667 16.85 0.00 46.10 4.55
5561 6082 4.436998 AGCCACCGCACGTAGCTC 62.437 66.667 0.00 0.00 42.61 4.09
5562 6083 4.436998 GAGCCACCGCACGTAGCT 62.437 66.667 8.07 0.00 42.61 3.32
5563 6084 4.436998 AGAGCCACCGCACGTAGC 62.437 66.667 0.00 0.00 37.52 3.58
5564 6085 2.202623 GAGAGCCACCGCACGTAG 60.203 66.667 0.00 0.00 37.52 3.51
5565 6086 4.111016 CGAGAGCCACCGCACGTA 62.111 66.667 0.00 0.00 37.52 3.57
5568 6089 4.057428 AGTCGAGAGCCACCGCAC 62.057 66.667 0.00 0.00 37.52 5.34
5569 6090 4.056125 CAGTCGAGAGCCACCGCA 62.056 66.667 0.00 0.00 37.52 5.69
5571 6092 3.691744 GAGCAGTCGAGAGCCACCG 62.692 68.421 5.47 0.00 0.00 4.94
5572 6093 1.882989 AAGAGCAGTCGAGAGCCACC 61.883 60.000 5.47 0.00 0.00 4.61
5573 6094 0.037790 AAAGAGCAGTCGAGAGCCAC 60.038 55.000 5.47 1.57 0.00 5.01
5574 6095 0.681733 AAAAGAGCAGTCGAGAGCCA 59.318 50.000 5.47 0.00 0.00 4.75
5575 6096 1.067213 AGAAAAGAGCAGTCGAGAGCC 60.067 52.381 5.47 0.00 0.00 4.70
5576 6097 2.362169 AGAAAAGAGCAGTCGAGAGC 57.638 50.000 0.90 0.90 0.00 4.09
5577 6098 5.665381 AAAAAGAAAAGAGCAGTCGAGAG 57.335 39.130 0.00 0.00 0.00 3.20
5598 6119 1.512926 GCACCTCTCGAGAGCAAAAA 58.487 50.000 32.79 2.08 40.75 1.94
5599 6120 0.667487 CGCACCTCTCGAGAGCAAAA 60.667 55.000 32.79 2.86 40.75 2.44
5600 6121 1.080501 CGCACCTCTCGAGAGCAAA 60.081 57.895 32.79 3.64 40.75 3.68
5601 6122 1.971695 TCGCACCTCTCGAGAGCAA 60.972 57.895 32.79 9.29 40.75 3.91
5602 6123 2.359975 TCGCACCTCTCGAGAGCA 60.360 61.111 32.79 13.20 40.75 4.26
5603 6124 2.101380 GTCGCACCTCTCGAGAGC 59.899 66.667 32.79 22.98 40.75 4.09
5604 6125 1.427419 CAGTCGCACCTCTCGAGAG 59.573 63.158 31.55 31.55 41.71 3.20
5605 6126 2.691771 GCAGTCGCACCTCTCGAGA 61.692 63.158 15.70 15.70 36.56 4.04
5606 6127 2.202544 GCAGTCGCACCTCTCGAG 60.203 66.667 5.93 5.93 36.56 4.04
5607 6128 2.673341 AGCAGTCGCACCTCTCGA 60.673 61.111 0.00 0.00 42.27 4.04
5608 6129 2.202544 GAGCAGTCGCACCTCTCG 60.203 66.667 0.00 0.00 42.27 4.04
5609 6130 0.457681 GAAGAGCAGTCGCACCTCTC 60.458 60.000 0.00 0.00 42.27 3.20
5610 6131 0.897863 AGAAGAGCAGTCGCACCTCT 60.898 55.000 0.00 0.00 42.27 3.69
5611 6132 0.037790 AAGAAGAGCAGTCGCACCTC 60.038 55.000 0.00 0.00 42.27 3.85
5612 6133 0.037790 GAAGAAGAGCAGTCGCACCT 60.038 55.000 0.00 0.00 42.27 4.00
5613 6134 0.037790 AGAAGAAGAGCAGTCGCACC 60.038 55.000 0.00 0.00 42.27 5.01
5614 6135 1.724082 GAAGAAGAAGAGCAGTCGCAC 59.276 52.381 0.00 0.00 42.27 5.34
5615 6136 1.615883 AGAAGAAGAAGAGCAGTCGCA 59.384 47.619 0.00 0.00 42.27 5.10
5616 6137 2.362169 AGAAGAAGAAGAGCAGTCGC 57.638 50.000 0.00 0.00 38.99 5.19
5617 6138 3.442273 AGGTAGAAGAAGAAGAGCAGTCG 59.558 47.826 0.00 0.00 0.00 4.18
5618 6139 4.219725 ACAGGTAGAAGAAGAAGAGCAGTC 59.780 45.833 0.00 0.00 0.00 3.51
5619 6140 4.021544 CACAGGTAGAAGAAGAAGAGCAGT 60.022 45.833 0.00 0.00 0.00 4.40
5620 6141 4.219507 TCACAGGTAGAAGAAGAAGAGCAG 59.780 45.833 0.00 0.00 0.00 4.24
5621 6142 4.152647 TCACAGGTAGAAGAAGAAGAGCA 58.847 43.478 0.00 0.00 0.00 4.26
5622 6143 4.792521 TCACAGGTAGAAGAAGAAGAGC 57.207 45.455 0.00 0.00 0.00 4.09
5623 6144 6.522625 TCATCACAGGTAGAAGAAGAAGAG 57.477 41.667 0.00 0.00 0.00 2.85
5624 6145 6.097554 GGATCATCACAGGTAGAAGAAGAAGA 59.902 42.308 0.00 0.00 0.00 2.87
5625 6146 6.127225 TGGATCATCACAGGTAGAAGAAGAAG 60.127 42.308 0.00 0.00 0.00 2.85
5626 6147 5.721480 TGGATCATCACAGGTAGAAGAAGAA 59.279 40.000 0.00 0.00 0.00 2.52
5627 6148 5.272402 TGGATCATCACAGGTAGAAGAAGA 58.728 41.667 0.00 0.00 0.00 2.87
5628 6149 5.604758 TGGATCATCACAGGTAGAAGAAG 57.395 43.478 0.00 0.00 0.00 2.85
5629 6150 5.163269 CCATGGATCATCACAGGTAGAAGAA 60.163 44.000 5.56 0.00 0.00 2.52
5630 6151 4.346127 CCATGGATCATCACAGGTAGAAGA 59.654 45.833 5.56 0.00 0.00 2.87
5631 6152 4.504514 CCCATGGATCATCACAGGTAGAAG 60.505 50.000 15.22 0.00 0.00 2.85
5632 6153 3.392285 CCCATGGATCATCACAGGTAGAA 59.608 47.826 15.22 0.00 0.00 2.10
5633 6154 2.974794 CCCATGGATCATCACAGGTAGA 59.025 50.000 15.22 0.00 0.00 2.59
5634 6155 2.039480 CCCCATGGATCATCACAGGTAG 59.961 54.545 15.22 0.00 0.00 3.18
5635 6156 2.057140 CCCCATGGATCATCACAGGTA 58.943 52.381 15.22 0.00 0.00 3.08
5636 6157 0.848735 CCCCATGGATCATCACAGGT 59.151 55.000 15.22 0.00 0.00 4.00
5637 6158 0.111832 CCCCCATGGATCATCACAGG 59.888 60.000 15.22 1.66 35.39 4.00
5638 6159 0.848735 ACCCCCATGGATCATCACAG 59.151 55.000 15.22 0.00 38.00 3.66
5639 6160 0.846015 GACCCCCATGGATCATCACA 59.154 55.000 15.22 0.00 38.00 3.58
5640 6161 1.143813 AGACCCCCATGGATCATCAC 58.856 55.000 15.22 0.00 38.00 3.06
5641 6162 2.182088 TCTAGACCCCCATGGATCATCA 59.818 50.000 15.22 0.00 38.00 3.07
5642 6163 2.907892 TCTAGACCCCCATGGATCATC 58.092 52.381 15.22 5.22 38.00 2.92
5643 6164 3.592221 ATCTAGACCCCCATGGATCAT 57.408 47.619 15.22 0.00 38.00 2.45


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.