Multiple sequence alignment - TraesCS6A01G011800
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6A01G011800 | chr6A | 100.000 | 9424 | 0 | 0 | 1 | 9424 | 5481862 | 5472439 | 0.000000e+00 | 17403.0 |
1 | TraesCS6A01G011800 | chr6A | 93.926 | 4445 | 238 | 13 | 4996 | 9424 | 5502231 | 5497803 | 0.000000e+00 | 6684.0 |
2 | TraesCS6A01G011800 | chr6A | 92.720 | 3324 | 163 | 27 | 568 | 3871 | 5505490 | 5502226 | 0.000000e+00 | 4724.0 |
3 | TraesCS6A01G011800 | chr6A | 81.352 | 1716 | 258 | 27 | 7743 | 9424 | 5551865 | 5550178 | 0.000000e+00 | 1339.0 |
4 | TraesCS6A01G011800 | chr6A | 81.315 | 867 | 109 | 29 | 568 | 1397 | 5558800 | 5557950 | 0.000000e+00 | 654.0 |
5 | TraesCS6A01G011800 | chr6A | 87.455 | 558 | 62 | 7 | 1495 | 2050 | 5557922 | 5557371 | 3.710000e-178 | 636.0 |
6 | TraesCS6A01G011800 | chr6A | 96.133 | 181 | 7 | 0 | 4817 | 4997 | 112960770 | 112960950 | 7.160000e-76 | 296.0 |
7 | TraesCS6A01G011800 | chr6A | 95.580 | 181 | 8 | 0 | 4817 | 4997 | 206430740 | 206430560 | 3.330000e-74 | 291.0 |
8 | TraesCS6A01G011800 | chr6A | 95.556 | 180 | 7 | 1 | 4817 | 4996 | 112706262 | 112706440 | 4.310000e-73 | 287.0 |
9 | TraesCS6A01G011800 | chr6A | 95.028 | 181 | 9 | 0 | 4817 | 4997 | 112764428 | 112764608 | 1.550000e-72 | 285.0 |
10 | TraesCS6A01G011800 | chr6A | 95.000 | 180 | 9 | 0 | 4817 | 4996 | 206461193 | 206461014 | 5.570000e-72 | 283.0 |
11 | TraesCS6A01G011800 | chr6A | 94.944 | 178 | 9 | 0 | 4817 | 4994 | 241574566 | 241574743 | 7.210000e-71 | 279.0 |
12 | TraesCS6A01G011800 | chr6A | 81.605 | 299 | 20 | 17 | 186 | 461 | 5505828 | 5505542 | 2.060000e-51 | 215.0 |
13 | TraesCS6A01G011800 | chr6A | 93.750 | 48 | 3 | 0 | 750 | 797 | 5505276 | 5505229 | 1.310000e-08 | 73.1 |
14 | TraesCS6A01G011800 | chr6D | 92.774 | 3626 | 237 | 14 | 5810 | 9424 | 6118581 | 6114970 | 0.000000e+00 | 5221.0 |
15 | TraesCS6A01G011800 | chr6D | 92.209 | 1874 | 127 | 8 | 2006 | 3871 | 6133817 | 6131955 | 0.000000e+00 | 2634.0 |
16 | TraesCS6A01G011800 | chr6D | 84.784 | 2011 | 249 | 25 | 7117 | 9113 | 6256660 | 6254693 | 0.000000e+00 | 1965.0 |
17 | TraesCS6A01G011800 | chr6D | 82.950 | 1871 | 269 | 19 | 5002 | 6848 | 6258512 | 6256668 | 0.000000e+00 | 1642.0 |
18 | TraesCS6A01G011800 | chr6D | 86.119 | 1376 | 165 | 16 | 1495 | 2863 | 6260852 | 6259496 | 0.000000e+00 | 1459.0 |
19 | TraesCS6A01G011800 | chr6D | 93.182 | 704 | 32 | 7 | 784 | 1473 | 6135200 | 6134499 | 0.000000e+00 | 1020.0 |
20 | TraesCS6A01G011800 | chr6D | 96.545 | 550 | 19 | 0 | 1458 | 2007 | 6134460 | 6133911 | 0.000000e+00 | 911.0 |
21 | TraesCS6A01G011800 | chr6D | 81.881 | 872 | 97 | 29 | 568 | 1397 | 6261732 | 6260880 | 0.000000e+00 | 678.0 |
22 | TraesCS6A01G011800 | chr6D | 89.273 | 289 | 22 | 5 | 5139 | 5418 | 6131694 | 6131406 | 4.190000e-93 | 353.0 |
23 | TraesCS6A01G011800 | chr6D | 83.489 | 321 | 18 | 15 | 164 | 461 | 6135742 | 6135434 | 5.610000e-67 | 267.0 |
24 | TraesCS6A01G011800 | chr6D | 79.426 | 418 | 45 | 16 | 165 | 557 | 6262118 | 6261717 | 3.380000e-64 | 257.0 |
25 | TraesCS6A01G011800 | chr6D | 91.803 | 183 | 11 | 3 | 4817 | 4996 | 378823157 | 378822976 | 1.570000e-62 | 252.0 |
26 | TraesCS6A01G011800 | chr6D | 91.713 | 181 | 14 | 1 | 4817 | 4996 | 376267256 | 376267076 | 5.650000e-62 | 250.0 |
27 | TraesCS6A01G011800 | chr6D | 91.209 | 182 | 15 | 1 | 4817 | 4997 | 299843836 | 299844017 | 7.310000e-61 | 246.0 |
28 | TraesCS6A01G011800 | chr6D | 90.374 | 187 | 14 | 4 | 4817 | 5000 | 421933387 | 421933572 | 9.450000e-60 | 243.0 |
29 | TraesCS6A01G011800 | chr6D | 92.405 | 79 | 6 | 0 | 5002 | 5080 | 6131954 | 6131876 | 7.730000e-21 | 113.0 |
30 | TraesCS6A01G011800 | chr6B | 91.238 | 2545 | 200 | 16 | 6888 | 9424 | 11416906 | 11414377 | 0.000000e+00 | 3443.0 |
31 | TraesCS6A01G011800 | chr6B | 91.581 | 1853 | 119 | 18 | 568 | 2387 | 11429227 | 11427379 | 0.000000e+00 | 2523.0 |
32 | TraesCS6A01G011800 | chr6B | 83.791 | 2406 | 329 | 32 | 1497 | 3871 | 11525447 | 11523072 | 0.000000e+00 | 2226.0 |
33 | TraesCS6A01G011800 | chr6B | 89.793 | 1499 | 141 | 7 | 2383 | 3871 | 11420220 | 11418724 | 0.000000e+00 | 1910.0 |
34 | TraesCS6A01G011800 | chr6B | 84.798 | 1559 | 199 | 21 | 7880 | 9423 | 11521066 | 11519531 | 0.000000e+00 | 1531.0 |
35 | TraesCS6A01G011800 | chr6B | 88.462 | 1170 | 96 | 13 | 5002 | 6132 | 11418723 | 11417554 | 0.000000e+00 | 1376.0 |
36 | TraesCS6A01G011800 | chr6B | 90.520 | 654 | 56 | 1 | 6169 | 6822 | 11417552 | 11416905 | 0.000000e+00 | 859.0 |
37 | TraesCS6A01G011800 | chr6B | 77.734 | 1280 | 141 | 53 | 165 | 1380 | 11526680 | 11525481 | 0.000000e+00 | 652.0 |
38 | TraesCS6A01G011800 | chr6B | 89.104 | 413 | 24 | 6 | 164 | 555 | 11429626 | 11429214 | 2.360000e-135 | 494.0 |
39 | TraesCS6A01G011800 | chr6B | 85.329 | 334 | 44 | 4 | 7103 | 7433 | 11521392 | 11521061 | 3.260000e-89 | 340.0 |
40 | TraesCS6A01G011800 | chr6B | 91.667 | 48 | 4 | 0 | 750 | 797 | 11429005 | 11428958 | 6.110000e-07 | 67.6 |
41 | TraesCS6A01G011800 | chr3A | 91.910 | 754 | 44 | 10 | 3872 | 4624 | 188762071 | 188762808 | 0.000000e+00 | 1038.0 |
42 | TraesCS6A01G011800 | chr3A | 90.382 | 759 | 61 | 9 | 3872 | 4624 | 369994166 | 369994918 | 0.000000e+00 | 987.0 |
43 | TraesCS6A01G011800 | chr3A | 88.830 | 761 | 73 | 8 | 3870 | 4624 | 369964934 | 369965688 | 0.000000e+00 | 924.0 |
44 | TraesCS6A01G011800 | chr3A | 97.990 | 199 | 3 | 1 | 4620 | 4818 | 540164158 | 540164355 | 2.520000e-90 | 344.0 |
45 | TraesCS6A01G011800 | chr3A | 93.607 | 219 | 13 | 1 | 4608 | 4825 | 176906578 | 176906796 | 9.130000e-85 | 326.0 |
46 | TraesCS6A01G011800 | chr3A | 95.580 | 181 | 7 | 1 | 4817 | 4996 | 369965678 | 369965858 | 1.200000e-73 | 289.0 |
47 | TraesCS6A01G011800 | chr4A | 90.395 | 760 | 62 | 9 | 3872 | 4623 | 113451101 | 113450345 | 0.000000e+00 | 989.0 |
48 | TraesCS6A01G011800 | chr4A | 90.369 | 758 | 59 | 10 | 3871 | 4624 | 31010793 | 31011540 | 0.000000e+00 | 983.0 |
49 | TraesCS6A01G011800 | chr4A | 90.382 | 759 | 58 | 12 | 3871 | 4624 | 560249115 | 560249863 | 0.000000e+00 | 983.0 |
50 | TraesCS6A01G011800 | chr4A | 89.432 | 757 | 66 | 10 | 3872 | 4624 | 31019361 | 31020107 | 0.000000e+00 | 942.0 |
51 | TraesCS6A01G011800 | chr4A | 88.874 | 764 | 73 | 8 | 3872 | 4624 | 203612058 | 203611296 | 0.000000e+00 | 929.0 |
52 | TraesCS6A01G011800 | chr4A | 87.949 | 780 | 65 | 10 | 3872 | 4624 | 203548875 | 203548098 | 0.000000e+00 | 893.0 |
53 | TraesCS6A01G011800 | chr4A | 96.447 | 197 | 7 | 0 | 4624 | 4820 | 551529125 | 551528929 | 9.130000e-85 | 326.0 |
54 | TraesCS6A01G011800 | chr4A | 95.939 | 197 | 8 | 0 | 4624 | 4820 | 377581720 | 377581916 | 4.250000e-83 | 320.0 |
55 | TraesCS6A01G011800 | chr4A | 95.556 | 180 | 8 | 0 | 4817 | 4996 | 303832584 | 303832405 | 1.200000e-73 | 289.0 |
56 | TraesCS6A01G011800 | chr4A | 95.556 | 180 | 8 | 0 | 4817 | 4996 | 504275327 | 504275148 | 1.200000e-73 | 289.0 |
57 | TraesCS6A01G011800 | chr4A | 95.506 | 178 | 8 | 0 | 4819 | 4996 | 113467494 | 113467317 | 1.550000e-72 | 285.0 |
58 | TraesCS6A01G011800 | chr2A | 90.464 | 755 | 58 | 9 | 3874 | 4624 | 425538060 | 425538804 | 0.000000e+00 | 983.0 |
59 | TraesCS6A01G011800 | chr2A | 96.923 | 195 | 6 | 0 | 4624 | 4818 | 28523946 | 28524140 | 2.540000e-85 | 327.0 |
60 | TraesCS6A01G011800 | chr2A | 95.980 | 199 | 8 | 0 | 4624 | 4822 | 377927599 | 377927797 | 3.280000e-84 | 324.0 |
61 | TraesCS6A01G011800 | chr2A | 96.111 | 180 | 7 | 0 | 4817 | 4996 | 495740933 | 495741112 | 2.570000e-75 | 294.0 |
62 | TraesCS6A01G011800 | chr7A | 94.931 | 217 | 7 | 2 | 4612 | 4826 | 50131699 | 50131485 | 4.220000e-88 | 337.0 |
63 | TraesCS6A01G011800 | chr7A | 96.939 | 196 | 6 | 0 | 4623 | 4818 | 707815813 | 707816008 | 7.060000e-86 | 329.0 |
64 | TraesCS6A01G011800 | chr7A | 97.222 | 180 | 5 | 0 | 4817 | 4996 | 439971325 | 439971504 | 1.190000e-78 | 305.0 |
65 | TraesCS6A01G011800 | chr7A | 96.685 | 181 | 6 | 0 | 4817 | 4997 | 497107961 | 497107781 | 1.540000e-77 | 302.0 |
66 | TraesCS6A01G011800 | chr7A | 96.133 | 181 | 6 | 1 | 4817 | 4996 | 288078185 | 288078365 | 2.570000e-75 | 294.0 |
67 | TraesCS6A01G011800 | chr7B | 88.462 | 260 | 25 | 4 | 4608 | 4863 | 546896512 | 546896254 | 9.190000e-80 | 309.0 |
68 | TraesCS6A01G011800 | chr5A | 96.154 | 182 | 7 | 0 | 4817 | 4998 | 57331528 | 57331709 | 1.990000e-76 | 298.0 |
69 | TraesCS6A01G011800 | chr1A | 96.154 | 182 | 7 | 0 | 4817 | 4998 | 326077977 | 326078158 | 1.990000e-76 | 298.0 |
70 | TraesCS6A01G011800 | chr1A | 94.475 | 181 | 10 | 0 | 4817 | 4997 | 9226502 | 9226682 | 7.210000e-71 | 279.0 |
71 | TraesCS6A01G011800 | chr1A | 94.475 | 181 | 8 | 2 | 4817 | 4996 | 148376098 | 148375919 | 2.590000e-70 | 278.0 |
72 | TraesCS6A01G011800 | chr1A | 94.444 | 180 | 10 | 0 | 4817 | 4996 | 325162138 | 325162317 | 2.590000e-70 | 278.0 |
73 | TraesCS6A01G011800 | chr1A | 94.444 | 180 | 10 | 0 | 4817 | 4996 | 432314474 | 432314653 | 2.590000e-70 | 278.0 |
74 | TraesCS6A01G011800 | chr1A | 94.382 | 178 | 10 | 0 | 4817 | 4994 | 187444921 | 187444744 | 3.350000e-69 | 274.0 |
75 | TraesCS6A01G011800 | chr1A | 93.889 | 180 | 11 | 0 | 4817 | 4996 | 106807525 | 106807346 | 1.210000e-68 | 272.0 |
76 | TraesCS6A01G011800 | chr1A | 93.333 | 180 | 12 | 0 | 4817 | 4996 | 432329449 | 432329628 | 5.610000e-67 | 267.0 |
77 | TraesCS6A01G011800 | chr1A | 92.818 | 181 | 12 | 1 | 4817 | 4997 | 362540214 | 362540035 | 2.610000e-65 | 261.0 |
78 | TraesCS6A01G011800 | chrUn | 93.258 | 178 | 12 | 0 | 4817 | 4994 | 72923865 | 72924042 | 7.260000e-66 | 263.0 |
79 | TraesCS6A01G011800 | chrUn | 93.258 | 178 | 12 | 0 | 4817 | 4994 | 286478713 | 286478536 | 7.260000e-66 | 263.0 |
80 | TraesCS6A01G011800 | chrUn | 91.813 | 171 | 14 | 0 | 4817 | 4987 | 296380832 | 296381002 | 1.220000e-58 | 239.0 |
81 | TraesCS6A01G011800 | chrUn | 91.813 | 171 | 14 | 0 | 4817 | 4987 | 340752577 | 340752407 | 1.220000e-58 | 239.0 |
82 | TraesCS6A01G011800 | chrUn | 89.617 | 183 | 16 | 2 | 4817 | 4996 | 331734025 | 331733843 | 7.360000e-56 | 230.0 |
83 | TraesCS6A01G011800 | chrUn | 87.432 | 183 | 19 | 4 | 4817 | 4996 | 270036230 | 270036411 | 3.450000e-49 | 207.0 |
84 | TraesCS6A01G011800 | chrUn | 87.432 | 183 | 19 | 4 | 4817 | 4996 | 330465735 | 330465916 | 3.450000e-49 | 207.0 |
85 | TraesCS6A01G011800 | chrUn | 87.432 | 183 | 20 | 3 | 4817 | 4997 | 357911162 | 357911343 | 3.450000e-49 | 207.0 |
86 | TraesCS6A01G011800 | chrUn | 86.486 | 185 | 21 | 4 | 4817 | 4998 | 25117462 | 25117279 | 5.770000e-47 | 200.0 |
87 | TraesCS6A01G011800 | chr5D | 92.857 | 182 | 11 | 2 | 4817 | 4996 | 366383682 | 366383863 | 7.260000e-66 | 263.0 |
88 | TraesCS6A01G011800 | chr4D | 92.308 | 182 | 12 | 2 | 4817 | 4996 | 98354571 | 98354752 | 3.380000e-64 | 257.0 |
89 | TraesCS6A01G011800 | chr4D | 92.265 | 181 | 13 | 1 | 4817 | 4996 | 360667568 | 360667388 | 1.210000e-63 | 255.0 |
90 | TraesCS6A01G011800 | chr4D | 92.982 | 171 | 9 | 3 | 4817 | 4985 | 103183069 | 103183238 | 7.310000e-61 | 246.0 |
91 | TraesCS6A01G011800 | chr4D | 91.209 | 182 | 14 | 2 | 4817 | 4996 | 289590673 | 289590854 | 7.310000e-61 | 246.0 |
92 | TraesCS6A01G011800 | chr4D | 91.257 | 183 | 13 | 2 | 4817 | 4997 | 320449177 | 320448996 | 7.310000e-61 | 246.0 |
93 | TraesCS6A01G011800 | chr4D | 91.209 | 182 | 14 | 2 | 4817 | 4996 | 404875457 | 404875638 | 7.310000e-61 | 246.0 |
94 | TraesCS6A01G011800 | chr4D | 91.160 | 181 | 15 | 1 | 4817 | 4996 | 75126605 | 75126785 | 2.630000e-60 | 244.0 |
95 | TraesCS6A01G011800 | chr4D | 91.160 | 181 | 15 | 1 | 4817 | 4996 | 78040176 | 78039996 | 2.630000e-60 | 244.0 |
96 | TraesCS6A01G011800 | chr4D | 89.947 | 189 | 15 | 3 | 4817 | 5002 | 196263506 | 196263319 | 3.400000e-59 | 241.0 |
97 | TraesCS6A01G011800 | chr1D | 92.350 | 183 | 11 | 3 | 4817 | 4996 | 454058449 | 454058631 | 3.380000e-64 | 257.0 |
98 | TraesCS6A01G011800 | chr1D | 91.758 | 182 | 13 | 2 | 4817 | 4996 | 355037484 | 355037303 | 1.570000e-62 | 252.0 |
99 | TraesCS6A01G011800 | chr1D | 91.803 | 183 | 12 | 2 | 4817 | 4996 | 409819757 | 409819575 | 1.570000e-62 | 252.0 |
100 | TraesCS6A01G011800 | chr1D | 91.803 | 183 | 12 | 2 | 4817 | 4996 | 409828337 | 409828155 | 1.570000e-62 | 252.0 |
101 | TraesCS6A01G011800 | chr1D | 90.957 | 188 | 13 | 3 | 4815 | 4999 | 119701687 | 119701501 | 5.650000e-62 | 250.0 |
102 | TraesCS6A01G011800 | chr1D | 90.957 | 188 | 11 | 4 | 4817 | 5002 | 96316250 | 96316433 | 2.030000e-61 | 248.0 |
103 | TraesCS6A01G011800 | chr7D | 83.824 | 68 | 8 | 3 | 81 | 146 | 636489208 | 636489274 | 2.840000e-05 | 62.1 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6A01G011800 | chr6A | 5472439 | 5481862 | 9423 | True | 17403.000 | 17403 | 100.000000 | 1 | 9424 | 1 | chr6A.!!$R1 | 9423 |
1 | TraesCS6A01G011800 | chr6A | 5497803 | 5505828 | 8025 | True | 2924.025 | 6684 | 90.500250 | 186 | 9424 | 4 | chr6A.!!$R5 | 9238 |
2 | TraesCS6A01G011800 | chr6A | 5550178 | 5551865 | 1687 | True | 1339.000 | 1339 | 81.352000 | 7743 | 9424 | 1 | chr6A.!!$R2 | 1681 |
3 | TraesCS6A01G011800 | chr6A | 5557371 | 5558800 | 1429 | True | 645.000 | 654 | 84.385000 | 568 | 2050 | 2 | chr6A.!!$R6 | 1482 |
4 | TraesCS6A01G011800 | chr6D | 6114970 | 6118581 | 3611 | True | 5221.000 | 5221 | 92.774000 | 5810 | 9424 | 1 | chr6D.!!$R1 | 3614 |
5 | TraesCS6A01G011800 | chr6D | 6254693 | 6262118 | 7425 | True | 1200.200 | 1965 | 83.032000 | 165 | 9113 | 5 | chr6D.!!$R5 | 8948 |
6 | TraesCS6A01G011800 | chr6D | 6131406 | 6135742 | 4336 | True | 883.000 | 2634 | 91.183833 | 164 | 5418 | 6 | chr6D.!!$R4 | 5254 |
7 | TraesCS6A01G011800 | chr6B | 11414377 | 11420220 | 5843 | True | 1897.000 | 3443 | 90.003250 | 2383 | 9424 | 4 | chr6B.!!$R1 | 7041 |
8 | TraesCS6A01G011800 | chr6B | 11519531 | 11526680 | 7149 | True | 1187.250 | 2226 | 82.913000 | 165 | 9423 | 4 | chr6B.!!$R3 | 9258 |
9 | TraesCS6A01G011800 | chr6B | 11427379 | 11429626 | 2247 | True | 1028.200 | 2523 | 90.784000 | 164 | 2387 | 3 | chr6B.!!$R2 | 2223 |
10 | TraesCS6A01G011800 | chr3A | 188762071 | 188762808 | 737 | False | 1038.000 | 1038 | 91.910000 | 3872 | 4624 | 1 | chr3A.!!$F2 | 752 |
11 | TraesCS6A01G011800 | chr3A | 369994166 | 369994918 | 752 | False | 987.000 | 987 | 90.382000 | 3872 | 4624 | 1 | chr3A.!!$F3 | 752 |
12 | TraesCS6A01G011800 | chr3A | 369964934 | 369965858 | 924 | False | 606.500 | 924 | 92.205000 | 3870 | 4996 | 2 | chr3A.!!$F5 | 1126 |
13 | TraesCS6A01G011800 | chr4A | 113450345 | 113451101 | 756 | True | 989.000 | 989 | 90.395000 | 3872 | 4623 | 1 | chr4A.!!$R1 | 751 |
14 | TraesCS6A01G011800 | chr4A | 31010793 | 31011540 | 747 | False | 983.000 | 983 | 90.369000 | 3871 | 4624 | 1 | chr4A.!!$F1 | 753 |
15 | TraesCS6A01G011800 | chr4A | 560249115 | 560249863 | 748 | False | 983.000 | 983 | 90.382000 | 3871 | 4624 | 1 | chr4A.!!$F4 | 753 |
16 | TraesCS6A01G011800 | chr4A | 31019361 | 31020107 | 746 | False | 942.000 | 942 | 89.432000 | 3872 | 4624 | 1 | chr4A.!!$F2 | 752 |
17 | TraesCS6A01G011800 | chr4A | 203611296 | 203612058 | 762 | True | 929.000 | 929 | 88.874000 | 3872 | 4624 | 1 | chr4A.!!$R4 | 752 |
18 | TraesCS6A01G011800 | chr4A | 203548098 | 203548875 | 777 | True | 893.000 | 893 | 87.949000 | 3872 | 4624 | 1 | chr4A.!!$R3 | 752 |
19 | TraesCS6A01G011800 | chr2A | 425538060 | 425538804 | 744 | False | 983.000 | 983 | 90.464000 | 3874 | 4624 | 1 | chr2A.!!$F3 | 750 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
793 | 887 | 0.036590 | TTCATGCTGGTGCTGCTGTA | 59.963 | 50.0 | 0.00 | 0.00 | 40.48 | 2.74 | F |
2042 | 2424 | 0.032952 | TGGGTGCTCACTACGTGTTC | 59.967 | 55.0 | 0.00 | 0.00 | 34.79 | 3.18 | F |
2986 | 3377 | 0.179020 | CAGTGTTGCTCTGGTTCCCA | 60.179 | 55.0 | 0.00 | 0.00 | 0.00 | 4.37 | F |
4708 | 5157 | 0.107410 | ATCGGCAAGTTAATCGGCCA | 60.107 | 50.0 | 2.24 | 0.00 | 46.75 | 5.36 | F |
4709 | 5158 | 0.107410 | TCGGCAAGTTAATCGGCCAT | 60.107 | 50.0 | 2.24 | 0.00 | 46.75 | 4.40 | F |
5178 | 5751 | 0.250209 | GATGGGTGCTCGATCATGCT | 60.250 | 55.0 | 8.15 | 0.00 | 31.87 | 3.79 | F |
7010 | 7647 | 0.396435 | ATCAACAAGCCGTGGAGACA | 59.604 | 50.0 | 0.00 | 0.00 | 28.41 | 3.41 | F |
7104 | 7743 | 0.322322 | CCCCAAAGCATGCATTGTGT | 59.678 | 50.0 | 28.16 | 1.92 | 0.00 | 3.72 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2100 | 2482 | 0.621862 | GTCCCCACCCCAAGAGAGAT | 60.622 | 60.0 | 0.00 | 0.0 | 0.00 | 2.75 | R |
3528 | 3936 | 0.251653 | TGCGGTAGTGGAGAGGAAGT | 60.252 | 55.0 | 0.00 | 0.0 | 0.00 | 3.01 | R |
4750 | 5199 | 0.107508 | CCTACTCGTAGGGTCACCGA | 60.108 | 60.0 | 14.08 | 0.0 | 46.96 | 4.69 | R |
6245 | 6874 | 0.037605 | GCCGGCACACTGTACTTACT | 60.038 | 55.0 | 24.80 | 0.0 | 0.00 | 2.24 | R |
6597 | 7228 | 0.537371 | AAAAGTTGAGGGTGAGGCCG | 60.537 | 55.0 | 0.00 | 0.0 | 38.44 | 6.13 | R |
7021 | 7658 | 0.178992 | CTTCACCCCACCAGAAAGCA | 60.179 | 55.0 | 0.00 | 0.0 | 0.00 | 3.91 | R |
8277 | 8924 | 0.534877 | TTGCCACGAATGAGCAGTGT | 60.535 | 50.0 | 0.00 | 0.0 | 34.71 | 3.55 | R |
8431 | 9078 | 0.755686 | GCCTCCTCCTTGACGATGAT | 59.244 | 55.0 | 0.00 | 0.0 | 0.00 | 2.45 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
105 | 106 | 9.277783 | AGATATTTTACTGTATGTGGATGAAGC | 57.722 | 33.333 | 0.00 | 0.00 | 0.00 | 3.86 |
106 | 107 | 8.978874 | ATATTTTACTGTATGTGGATGAAGCA | 57.021 | 30.769 | 0.00 | 0.00 | 0.00 | 3.91 |
107 | 108 | 6.494893 | TTTTACTGTATGTGGATGAAGCAC | 57.505 | 37.500 | 0.00 | 0.00 | 0.00 | 4.40 |
108 | 109 | 2.621338 | ACTGTATGTGGATGAAGCACG | 58.379 | 47.619 | 0.00 | 0.00 | 0.00 | 5.34 |
109 | 110 | 2.028112 | ACTGTATGTGGATGAAGCACGT | 60.028 | 45.455 | 0.00 | 0.00 | 0.00 | 4.49 |
110 | 111 | 2.345876 | TGTATGTGGATGAAGCACGTG | 58.654 | 47.619 | 12.28 | 12.28 | 0.00 | 4.49 |
111 | 112 | 1.665679 | GTATGTGGATGAAGCACGTGG | 59.334 | 52.381 | 18.88 | 0.00 | 0.00 | 4.94 |
112 | 113 | 1.308069 | ATGTGGATGAAGCACGTGGC | 61.308 | 55.000 | 18.88 | 9.78 | 45.30 | 5.01 |
121 | 122 | 3.922175 | GCACGTGGCTTCTTTTGC | 58.078 | 55.556 | 18.88 | 0.00 | 40.25 | 3.68 |
122 | 123 | 1.360192 | GCACGTGGCTTCTTTTGCT | 59.640 | 52.632 | 18.88 | 0.00 | 40.25 | 3.91 |
123 | 124 | 0.249031 | GCACGTGGCTTCTTTTGCTT | 60.249 | 50.000 | 18.88 | 0.00 | 40.25 | 3.91 |
124 | 125 | 1.001815 | GCACGTGGCTTCTTTTGCTTA | 60.002 | 47.619 | 18.88 | 0.00 | 40.25 | 3.09 |
125 | 126 | 2.351738 | GCACGTGGCTTCTTTTGCTTAT | 60.352 | 45.455 | 18.88 | 0.00 | 40.25 | 1.73 |
126 | 127 | 3.236816 | CACGTGGCTTCTTTTGCTTATG | 58.763 | 45.455 | 7.95 | 0.00 | 0.00 | 1.90 |
127 | 128 | 2.884639 | ACGTGGCTTCTTTTGCTTATGT | 59.115 | 40.909 | 0.00 | 0.00 | 0.00 | 2.29 |
128 | 129 | 3.317993 | ACGTGGCTTCTTTTGCTTATGTT | 59.682 | 39.130 | 0.00 | 0.00 | 0.00 | 2.71 |
129 | 130 | 4.202111 | ACGTGGCTTCTTTTGCTTATGTTT | 60.202 | 37.500 | 0.00 | 0.00 | 0.00 | 2.83 |
130 | 131 | 4.744631 | CGTGGCTTCTTTTGCTTATGTTTT | 59.255 | 37.500 | 0.00 | 0.00 | 0.00 | 2.43 |
131 | 132 | 5.918011 | CGTGGCTTCTTTTGCTTATGTTTTA | 59.082 | 36.000 | 0.00 | 0.00 | 0.00 | 1.52 |
132 | 133 | 6.419413 | CGTGGCTTCTTTTGCTTATGTTTTAA | 59.581 | 34.615 | 0.00 | 0.00 | 0.00 | 1.52 |
133 | 134 | 7.116233 | CGTGGCTTCTTTTGCTTATGTTTTAAT | 59.884 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
134 | 135 | 8.773645 | GTGGCTTCTTTTGCTTATGTTTTAATT | 58.226 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
135 | 136 | 9.988815 | TGGCTTCTTTTGCTTATGTTTTAATTA | 57.011 | 25.926 | 0.00 | 0.00 | 0.00 | 1.40 |
204 | 205 | 0.470766 | AGACGGTTGGGTGCTTTACA | 59.529 | 50.000 | 0.00 | 0.00 | 0.00 | 2.41 |
330 | 346 | 3.256558 | TGCTTCGTGTGATCTTGATCAG | 58.743 | 45.455 | 12.95 | 3.36 | 0.00 | 2.90 |
370 | 414 | 1.003118 | TGAAGGATTCCCCGTGTCTTG | 59.997 | 52.381 | 0.00 | 0.00 | 46.93 | 3.02 |
381 | 425 | 1.603172 | CCGTGTCTTGTCCTCTCACAC | 60.603 | 57.143 | 0.00 | 0.00 | 35.11 | 3.82 |
406 | 450 | 1.402968 | CCGGTTTGATTGGAGATGCAG | 59.597 | 52.381 | 0.00 | 0.00 | 0.00 | 4.41 |
415 | 459 | 3.581024 | TTGGAGATGCAGCACATTTTC | 57.419 | 42.857 | 4.07 | 0.00 | 39.84 | 2.29 |
416 | 460 | 2.516906 | TGGAGATGCAGCACATTTTCA | 58.483 | 42.857 | 4.07 | 0.00 | 39.84 | 2.69 |
455 | 499 | 9.871238 | GAGAATACAAACTCACCTTTCAGTATA | 57.129 | 33.333 | 0.00 | 0.00 | 33.86 | 1.47 |
470 | 515 | 7.837187 | CCTTTCAGTATATTTTTGAGGGGGTAA | 59.163 | 37.037 | 0.00 | 0.00 | 0.00 | 2.85 |
483 | 528 | 2.748513 | GGGTAAGCGGGGTATGCCA | 61.749 | 63.158 | 1.04 | 0.00 | 36.17 | 4.92 |
485 | 530 | 0.179001 | GGTAAGCGGGGTATGCCAAT | 60.179 | 55.000 | 1.04 | 0.00 | 36.17 | 3.16 |
496 | 541 | 3.493176 | GGGTATGCCAATCCATTTCTTGC | 60.493 | 47.826 | 1.04 | 0.00 | 36.17 | 4.01 |
503 | 548 | 2.226962 | ATCCATTTCTTGCAGGCACT | 57.773 | 45.000 | 0.00 | 0.00 | 43.88 | 4.40 |
557 | 602 | 9.113838 | TGTATCTCTTAAAAATCTTGGCTGATC | 57.886 | 33.333 | 0.00 | 0.00 | 0.00 | 2.92 |
559 | 604 | 7.383102 | TCTCTTAAAAATCTTGGCTGATCAC | 57.617 | 36.000 | 0.00 | 0.00 | 0.00 | 3.06 |
560 | 605 | 6.375455 | TCTCTTAAAAATCTTGGCTGATCACC | 59.625 | 38.462 | 0.00 | 0.00 | 0.00 | 4.02 |
561 | 606 | 5.418840 | TCTTAAAAATCTTGGCTGATCACCC | 59.581 | 40.000 | 0.00 | 0.00 | 0.00 | 4.61 |
562 | 607 | 1.755179 | AAATCTTGGCTGATCACCCG | 58.245 | 50.000 | 2.59 | 0.09 | 0.00 | 5.28 |
566 | 611 | 1.073125 | TCTTGGCTGATCACCCGAAAA | 59.927 | 47.619 | 2.59 | 0.00 | 0.00 | 2.29 |
639 | 686 | 0.682292 | TTCTGGATGCACCACGTACA | 59.318 | 50.000 | 4.16 | 0.00 | 44.64 | 2.90 |
645 | 692 | 2.095919 | GGATGCACCACGTACACTTTTC | 60.096 | 50.000 | 0.00 | 0.00 | 38.79 | 2.29 |
646 | 693 | 2.025589 | TGCACCACGTACACTTTTCA | 57.974 | 45.000 | 0.00 | 0.00 | 0.00 | 2.69 |
652 | 699 | 3.311596 | ACCACGTACACTTTTCAGCTTTC | 59.688 | 43.478 | 0.00 | 0.00 | 0.00 | 2.62 |
762 | 856 | 1.679680 | GCATTCATGGTGCTGCTGTAT | 59.320 | 47.619 | 14.30 | 0.00 | 39.45 | 2.29 |
782 | 876 | 4.778534 | ATGGTTTTGTCTCTTCATGCTG | 57.221 | 40.909 | 0.00 | 0.00 | 0.00 | 4.41 |
783 | 877 | 2.886523 | TGGTTTTGTCTCTTCATGCTGG | 59.113 | 45.455 | 0.00 | 0.00 | 0.00 | 4.85 |
784 | 878 | 2.887152 | GGTTTTGTCTCTTCATGCTGGT | 59.113 | 45.455 | 0.00 | 0.00 | 0.00 | 4.00 |
785 | 879 | 3.304928 | GGTTTTGTCTCTTCATGCTGGTG | 60.305 | 47.826 | 0.00 | 0.00 | 0.00 | 4.17 |
786 | 880 | 1.527034 | TTGTCTCTTCATGCTGGTGC | 58.473 | 50.000 | 0.00 | 0.00 | 40.20 | 5.01 |
787 | 881 | 0.689055 | TGTCTCTTCATGCTGGTGCT | 59.311 | 50.000 | 0.00 | 0.00 | 40.48 | 4.40 |
788 | 882 | 1.085091 | GTCTCTTCATGCTGGTGCTG | 58.915 | 55.000 | 0.00 | 0.00 | 40.48 | 4.41 |
789 | 883 | 0.675837 | TCTCTTCATGCTGGTGCTGC | 60.676 | 55.000 | 0.00 | 0.00 | 40.48 | 5.25 |
790 | 884 | 0.677098 | CTCTTCATGCTGGTGCTGCT | 60.677 | 55.000 | 0.00 | 0.00 | 40.48 | 4.24 |
791 | 885 | 0.958876 | TCTTCATGCTGGTGCTGCTG | 60.959 | 55.000 | 0.00 | 0.00 | 40.48 | 4.41 |
792 | 886 | 1.228337 | TTCATGCTGGTGCTGCTGT | 60.228 | 52.632 | 0.00 | 0.00 | 40.48 | 4.40 |
793 | 887 | 0.036590 | TTCATGCTGGTGCTGCTGTA | 59.963 | 50.000 | 0.00 | 0.00 | 40.48 | 2.74 |
794 | 888 | 0.036590 | TCATGCTGGTGCTGCTGTAA | 59.963 | 50.000 | 0.00 | 0.00 | 40.48 | 2.41 |
795 | 889 | 0.883153 | CATGCTGGTGCTGCTGTAAA | 59.117 | 50.000 | 0.00 | 0.00 | 40.48 | 2.01 |
796 | 890 | 1.135489 | CATGCTGGTGCTGCTGTAAAG | 60.135 | 52.381 | 0.00 | 0.00 | 40.48 | 1.85 |
797 | 891 | 0.179020 | TGCTGGTGCTGCTGTAAAGT | 60.179 | 50.000 | 0.00 | 0.00 | 40.48 | 2.66 |
798 | 892 | 0.954452 | GCTGGTGCTGCTGTAAAGTT | 59.046 | 50.000 | 0.00 | 0.00 | 36.03 | 2.66 |
799 | 893 | 1.338020 | GCTGGTGCTGCTGTAAAGTTT | 59.662 | 47.619 | 0.00 | 0.00 | 36.03 | 2.66 |
800 | 894 | 2.223805 | GCTGGTGCTGCTGTAAAGTTTT | 60.224 | 45.455 | 0.00 | 0.00 | 36.03 | 2.43 |
801 | 895 | 3.374745 | CTGGTGCTGCTGTAAAGTTTTG | 58.625 | 45.455 | 0.00 | 0.00 | 0.00 | 2.44 |
802 | 896 | 2.757868 | TGGTGCTGCTGTAAAGTTTTGT | 59.242 | 40.909 | 0.00 | 0.00 | 0.00 | 2.83 |
803 | 897 | 3.181491 | TGGTGCTGCTGTAAAGTTTTGTC | 60.181 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
804 | 898 | 3.066760 | GGTGCTGCTGTAAAGTTTTGTCT | 59.933 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
805 | 899 | 4.282873 | GTGCTGCTGTAAAGTTTTGTCTC | 58.717 | 43.478 | 0.00 | 0.00 | 0.00 | 3.36 |
806 | 900 | 4.035675 | GTGCTGCTGTAAAGTTTTGTCTCT | 59.964 | 41.667 | 0.00 | 0.00 | 0.00 | 3.10 |
807 | 901 | 4.640201 | TGCTGCTGTAAAGTTTTGTCTCTT | 59.360 | 37.500 | 0.00 | 0.00 | 0.00 | 2.85 |
808 | 902 | 5.208503 | GCTGCTGTAAAGTTTTGTCTCTTC | 58.791 | 41.667 | 0.00 | 0.00 | 0.00 | 2.87 |
809 | 903 | 5.220854 | GCTGCTGTAAAGTTTTGTCTCTTCA | 60.221 | 40.000 | 0.00 | 0.00 | 0.00 | 3.02 |
810 | 904 | 6.514048 | GCTGCTGTAAAGTTTTGTCTCTTCAT | 60.514 | 38.462 | 0.00 | 0.00 | 0.00 | 2.57 |
811 | 905 | 7.307989 | GCTGCTGTAAAGTTTTGTCTCTTCATA | 60.308 | 37.037 | 0.00 | 0.00 | 0.00 | 2.15 |
812 | 906 | 7.861630 | TGCTGTAAAGTTTTGTCTCTTCATAC | 58.138 | 34.615 | 0.00 | 0.00 | 0.00 | 2.39 |
813 | 907 | 7.715249 | TGCTGTAAAGTTTTGTCTCTTCATACT | 59.285 | 33.333 | 0.00 | 0.00 | 0.00 | 2.12 |
843 | 1022 | 2.817844 | TGTAGAGCATACACGTGTCTGT | 59.182 | 45.455 | 27.16 | 16.92 | 0.00 | 3.41 |
935 | 1123 | 0.730834 | CACTCTCACAACGCTCCTCG | 60.731 | 60.000 | 0.00 | 0.00 | 45.38 | 4.63 |
941 | 1129 | 2.268802 | ACAACGCTCCTCGCTCTCA | 61.269 | 57.895 | 0.00 | 0.00 | 43.23 | 3.27 |
948 | 1146 | 2.578178 | CCTCGCTCTCAACGCTCG | 60.578 | 66.667 | 0.00 | 0.00 | 0.00 | 5.03 |
971 | 1169 | 1.593196 | CTGACGGGCAAGAGTTTGAA | 58.407 | 50.000 | 0.00 | 0.00 | 36.36 | 2.69 |
984 | 1182 | 2.539338 | TTTGAAGCGCGTGTGACCC | 61.539 | 57.895 | 8.43 | 0.00 | 0.00 | 4.46 |
1198 | 1403 | 2.821546 | CTCTTTGTGTTCTGACCGACA | 58.178 | 47.619 | 0.00 | 0.00 | 0.00 | 4.35 |
1396 | 1622 | 2.239402 | TCCTCACACATGCCACACATAT | 59.761 | 45.455 | 0.00 | 0.00 | 36.64 | 1.78 |
1397 | 1623 | 3.018856 | CCTCACACATGCCACACATATT | 58.981 | 45.455 | 0.00 | 0.00 | 36.64 | 1.28 |
1398 | 1624 | 3.444742 | CCTCACACATGCCACACATATTT | 59.555 | 43.478 | 0.00 | 0.00 | 36.64 | 1.40 |
1854 | 2141 | 6.094603 | GGACTACAGAGATGCATGAATTGTTT | 59.905 | 38.462 | 2.46 | 0.00 | 0.00 | 2.83 |
1966 | 2253 | 6.180472 | GTGGACCATCTTTTCTTTCTCCATA | 58.820 | 40.000 | 0.00 | 0.00 | 0.00 | 2.74 |
2037 | 2419 | 6.046593 | TCTTAATAATTGGGTGCTCACTACG | 58.953 | 40.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2042 | 2424 | 0.032952 | TGGGTGCTCACTACGTGTTC | 59.967 | 55.000 | 0.00 | 0.00 | 34.79 | 3.18 |
2100 | 2482 | 4.696877 | CCAAACTTGCTGACATATGAGTGA | 59.303 | 41.667 | 10.38 | 0.00 | 0.00 | 3.41 |
2257 | 2641 | 2.673775 | TTTGGCTTGGTTGGATGAGA | 57.326 | 45.000 | 0.00 | 0.00 | 0.00 | 3.27 |
2307 | 2694 | 5.463392 | CGTGGTAACTCATTGAATCGATGAT | 59.537 | 40.000 | 13.15 | 3.13 | 34.24 | 2.45 |
2335 | 2722 | 6.147473 | TGTATATTGGAGGAGTGGATGGTTA | 58.853 | 40.000 | 0.00 | 0.00 | 0.00 | 2.85 |
2467 | 2856 | 1.160870 | ACATCCCCCAGTCCACTCA | 59.839 | 57.895 | 0.00 | 0.00 | 0.00 | 3.41 |
2562 | 2952 | 3.000819 | CCCGGTCAGCACCTACCA | 61.001 | 66.667 | 0.00 | 0.00 | 41.17 | 3.25 |
2588 | 2978 | 1.389609 | GGTTCGTCCGGGAGCATCTA | 61.390 | 60.000 | 0.00 | 0.00 | 33.73 | 1.98 |
2599 | 2989 | 1.202830 | GGAGCATCTACTCTCCCTCGA | 60.203 | 57.143 | 0.00 | 0.00 | 42.30 | 4.04 |
2610 | 3001 | 1.027357 | CTCCCTCGATGGCCAATTTG | 58.973 | 55.000 | 10.96 | 0.00 | 0.00 | 2.32 |
2632 | 3023 | 0.888736 | TTGACATCCCGGTTGTGCTG | 60.889 | 55.000 | 11.65 | 0.00 | 0.00 | 4.41 |
2768 | 3159 | 4.159377 | TGTCTTCCAAAAAGCTATTGCG | 57.841 | 40.909 | 6.64 | 1.97 | 45.42 | 4.85 |
2770 | 3161 | 4.083324 | TGTCTTCCAAAAAGCTATTGCGAG | 60.083 | 41.667 | 6.64 | 6.65 | 45.42 | 5.03 |
2792 | 3183 | 1.468985 | CCACGGTGGCCAATTCATTA | 58.531 | 50.000 | 15.29 | 0.00 | 0.00 | 1.90 |
2803 | 3194 | 4.590222 | GGCCAATTCATTATCTCCCACAAT | 59.410 | 41.667 | 0.00 | 0.00 | 0.00 | 2.71 |
2986 | 3377 | 0.179020 | CAGTGTTGCTCTGGTTCCCA | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 4.37 |
2990 | 3381 | 1.228245 | TTGCTCTGGTTCCCACTGC | 60.228 | 57.895 | 0.00 | 0.00 | 0.00 | 4.40 |
3078 | 3471 | 8.597167 | CCCCATCTTGTCTCATCTACATTAATA | 58.403 | 37.037 | 0.00 | 0.00 | 0.00 | 0.98 |
3146 | 3540 | 0.770166 | TCATCCACCCCACCACTTGA | 60.770 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
3188 | 3590 | 2.270205 | CATGCTCCAGCCTCGGTT | 59.730 | 61.111 | 0.00 | 0.00 | 41.18 | 4.44 |
3222 | 3625 | 7.398829 | TGTTGCCTCCACTATATAAAAGAACA | 58.601 | 34.615 | 0.00 | 0.00 | 0.00 | 3.18 |
3257 | 3660 | 2.502295 | GCATAGATTGCCTCTTCCCAG | 58.498 | 52.381 | 0.00 | 0.00 | 46.15 | 4.45 |
3262 | 3665 | 0.624500 | ATTGCCTCTTCCCAGCCCTA | 60.625 | 55.000 | 0.00 | 0.00 | 0.00 | 3.53 |
3275 | 3682 | 2.398588 | CAGCCCTAACCATCTCCACTA | 58.601 | 52.381 | 0.00 | 0.00 | 0.00 | 2.74 |
3301 | 3708 | 1.892819 | CTCGCTCCTCTCCCAAAGCA | 61.893 | 60.000 | 0.00 | 0.00 | 34.39 | 3.91 |
3523 | 3931 | 3.164269 | CTCCCCCGACCTGGATGG | 61.164 | 72.222 | 0.00 | 0.78 | 42.00 | 3.51 |
3606 | 4014 | 0.534873 | GTGCCTGGTTTTGTTGTGGT | 59.465 | 50.000 | 0.00 | 0.00 | 0.00 | 4.16 |
3677 | 4087 | 5.070685 | CCTAGTTTTGTCAACTAAAGGCCT | 58.929 | 41.667 | 0.00 | 0.00 | 32.89 | 5.19 |
3714 | 4124 | 2.291540 | CCTTTTTCCTGCCCCACATCTA | 60.292 | 50.000 | 0.00 | 0.00 | 0.00 | 1.98 |
3738 | 4148 | 3.636764 | GGTTTGTTTCTCCATCACCAACT | 59.363 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
3846 | 4258 | 4.123506 | CGGTGGGCAATTTTAACTTTGTT | 58.876 | 39.130 | 0.00 | 0.00 | 0.00 | 2.83 |
3853 | 4265 | 6.181944 | GGCAATTTTAACTTTGTTTGTGACG | 58.818 | 36.000 | 0.00 | 0.00 | 0.00 | 4.35 |
3907 | 4319 | 2.936032 | GGGGTCCCCAGACTTGCT | 60.936 | 66.667 | 23.53 | 0.00 | 44.65 | 3.91 |
3969 | 4381 | 2.381911 | GGCCCATCATCATCAACAAGT | 58.618 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
4027 | 4439 | 1.192803 | GGACGTCCCAAGACCTCCTT | 61.193 | 60.000 | 24.75 | 0.00 | 42.07 | 3.36 |
4183 | 4599 | 1.376037 | GTGCTAAGGAGGCAAGCGT | 60.376 | 57.895 | 0.00 | 0.00 | 41.54 | 5.07 |
4209 | 4625 | 1.068250 | GAGTACCGAGGCATCAGGC | 59.932 | 63.158 | 8.76 | 0.00 | 43.74 | 4.85 |
4283 | 4699 | 2.439156 | GTCACCATGGAGCCCAGC | 60.439 | 66.667 | 21.47 | 0.00 | 36.75 | 4.85 |
4301 | 4718 | 3.991051 | ACGGCGTCACCACCAGAG | 61.991 | 66.667 | 6.77 | 0.00 | 39.03 | 3.35 |
4335 | 4752 | 2.640316 | AGACCACCTTTTGTCAGGAC | 57.360 | 50.000 | 0.00 | 0.00 | 37.39 | 3.85 |
4390 | 4808 | 1.152830 | GTTGTTGGCTCCCTTCCCA | 59.847 | 57.895 | 0.00 | 0.00 | 0.00 | 4.37 |
4457 | 4879 | 1.144093 | ACCACCTAGAGAGAGGGATCG | 59.856 | 57.143 | 0.00 | 0.00 | 41.36 | 3.69 |
4459 | 4881 | 2.158593 | CCACCTAGAGAGAGGGATCGAA | 60.159 | 54.545 | 0.00 | 0.00 | 41.36 | 3.71 |
4460 | 4882 | 3.146066 | CACCTAGAGAGAGGGATCGAAG | 58.854 | 54.545 | 0.00 | 0.00 | 41.36 | 3.79 |
4463 | 4885 | 1.227249 | AGAGAGAGGGATCGAAGGGA | 58.773 | 55.000 | 0.00 | 0.00 | 0.00 | 4.20 |
4464 | 4886 | 1.144913 | AGAGAGAGGGATCGAAGGGAG | 59.855 | 57.143 | 0.00 | 0.00 | 0.00 | 4.30 |
4465 | 4887 | 1.144093 | GAGAGAGGGATCGAAGGGAGA | 59.856 | 57.143 | 0.00 | 0.00 | 0.00 | 3.71 |
4472 | 4914 | 2.225017 | GGGATCGAAGGGAGAGAGAGAT | 60.225 | 54.545 | 0.00 | 0.00 | 0.00 | 2.75 |
4563 | 5012 | 0.853530 | AGGCTGTTCTTCCCCTTGTT | 59.146 | 50.000 | 0.00 | 0.00 | 0.00 | 2.83 |
4564 | 5013 | 1.217942 | AGGCTGTTCTTCCCCTTGTTT | 59.782 | 47.619 | 0.00 | 0.00 | 0.00 | 2.83 |
4565 | 5014 | 1.341209 | GGCTGTTCTTCCCCTTGTTTG | 59.659 | 52.381 | 0.00 | 0.00 | 0.00 | 2.93 |
4587 | 5036 | 1.588239 | TCATCATCAGCCCAAGAGGT | 58.412 | 50.000 | 0.00 | 0.00 | 38.26 | 3.85 |
4588 | 5037 | 1.211212 | TCATCATCAGCCCAAGAGGTG | 59.789 | 52.381 | 0.00 | 0.00 | 38.26 | 4.00 |
4616 | 5065 | 1.296715 | CACCACACTGGAGTAGGGC | 59.703 | 63.158 | 0.00 | 0.00 | 40.96 | 5.19 |
4624 | 5073 | 2.236146 | CACTGGAGTAGGGCATTACACA | 59.764 | 50.000 | 1.99 | 0.46 | 0.00 | 3.72 |
4625 | 5074 | 3.115390 | ACTGGAGTAGGGCATTACACAT | 58.885 | 45.455 | 1.99 | 0.00 | 0.00 | 3.21 |
4626 | 5075 | 3.523564 | ACTGGAGTAGGGCATTACACATT | 59.476 | 43.478 | 1.99 | 0.00 | 0.00 | 2.71 |
4627 | 5076 | 3.879295 | CTGGAGTAGGGCATTACACATTG | 59.121 | 47.826 | 1.99 | 0.00 | 0.00 | 2.82 |
4628 | 5077 | 3.265737 | TGGAGTAGGGCATTACACATTGT | 59.734 | 43.478 | 1.99 | 0.00 | 0.00 | 2.71 |
4629 | 5078 | 4.263727 | TGGAGTAGGGCATTACACATTGTT | 60.264 | 41.667 | 0.00 | 0.00 | 0.00 | 2.83 |
4630 | 5079 | 4.096382 | GGAGTAGGGCATTACACATTGTTG | 59.904 | 45.833 | 0.00 | 0.00 | 0.00 | 3.33 |
4631 | 5080 | 4.917385 | AGTAGGGCATTACACATTGTTGA | 58.083 | 39.130 | 0.00 | 0.00 | 0.00 | 3.18 |
4632 | 5081 | 4.943705 | AGTAGGGCATTACACATTGTTGAG | 59.056 | 41.667 | 0.00 | 0.00 | 0.00 | 3.02 |
4633 | 5082 | 3.091545 | AGGGCATTACACATTGTTGAGG | 58.908 | 45.455 | 0.00 | 0.00 | 0.00 | 3.86 |
4634 | 5083 | 3.088532 | GGGCATTACACATTGTTGAGGA | 58.911 | 45.455 | 0.00 | 0.00 | 0.00 | 3.71 |
4635 | 5084 | 3.509575 | GGGCATTACACATTGTTGAGGAA | 59.490 | 43.478 | 0.00 | 0.00 | 0.00 | 3.36 |
4636 | 5085 | 4.021544 | GGGCATTACACATTGTTGAGGAAA | 60.022 | 41.667 | 0.00 | 0.00 | 0.00 | 3.13 |
4637 | 5086 | 5.337491 | GGGCATTACACATTGTTGAGGAAAT | 60.337 | 40.000 | 0.00 | 0.00 | 0.00 | 2.17 |
4638 | 5087 | 5.807011 | GGCATTACACATTGTTGAGGAAATC | 59.193 | 40.000 | 0.00 | 0.00 | 0.00 | 2.17 |
4639 | 5088 | 5.512788 | GCATTACACATTGTTGAGGAAATCG | 59.487 | 40.000 | 0.00 | 0.00 | 0.00 | 3.34 |
4640 | 5089 | 6.611381 | CATTACACATTGTTGAGGAAATCGT | 58.389 | 36.000 | 0.00 | 0.00 | 0.00 | 3.73 |
4641 | 5090 | 6.627395 | TTACACATTGTTGAGGAAATCGTT | 57.373 | 33.333 | 0.00 | 0.00 | 0.00 | 3.85 |
4642 | 5091 | 7.731882 | TTACACATTGTTGAGGAAATCGTTA | 57.268 | 32.000 | 0.00 | 0.00 | 0.00 | 3.18 |
4643 | 5092 | 6.627395 | ACACATTGTTGAGGAAATCGTTAA | 57.373 | 33.333 | 0.00 | 0.00 | 0.00 | 2.01 |
4644 | 5093 | 6.435428 | ACACATTGTTGAGGAAATCGTTAAC | 58.565 | 36.000 | 0.00 | 0.00 | 32.93 | 2.01 |
4645 | 5094 | 6.262273 | ACACATTGTTGAGGAAATCGTTAACT | 59.738 | 34.615 | 3.71 | 0.00 | 33.31 | 2.24 |
4646 | 5095 | 6.578545 | CACATTGTTGAGGAAATCGTTAACTG | 59.421 | 38.462 | 3.71 | 0.00 | 33.31 | 3.16 |
4647 | 5096 | 5.682943 | TTGTTGAGGAAATCGTTAACTGG | 57.317 | 39.130 | 3.71 | 0.00 | 33.31 | 4.00 |
4648 | 5097 | 4.710324 | TGTTGAGGAAATCGTTAACTGGT | 58.290 | 39.130 | 3.71 | 0.00 | 33.31 | 4.00 |
4649 | 5098 | 5.856156 | TGTTGAGGAAATCGTTAACTGGTA | 58.144 | 37.500 | 3.71 | 0.00 | 33.31 | 3.25 |
4650 | 5099 | 5.929992 | TGTTGAGGAAATCGTTAACTGGTAG | 59.070 | 40.000 | 3.71 | 0.00 | 33.31 | 3.18 |
4651 | 5100 | 4.501071 | TGAGGAAATCGTTAACTGGTAGC | 58.499 | 43.478 | 3.71 | 0.00 | 0.00 | 3.58 |
4652 | 5101 | 4.222145 | TGAGGAAATCGTTAACTGGTAGCT | 59.778 | 41.667 | 3.71 | 0.00 | 0.00 | 3.32 |
4653 | 5102 | 4.504858 | AGGAAATCGTTAACTGGTAGCTG | 58.495 | 43.478 | 3.71 | 0.00 | 0.00 | 4.24 |
4654 | 5103 | 3.063588 | GGAAATCGTTAACTGGTAGCTGC | 59.936 | 47.826 | 3.71 | 0.00 | 0.00 | 5.25 |
4655 | 5104 | 3.611766 | AATCGTTAACTGGTAGCTGCT | 57.388 | 42.857 | 7.57 | 7.57 | 0.00 | 4.24 |
4656 | 5105 | 2.649331 | TCGTTAACTGGTAGCTGCTC | 57.351 | 50.000 | 4.91 | 0.00 | 0.00 | 4.26 |
4657 | 5106 | 1.135489 | TCGTTAACTGGTAGCTGCTCG | 60.135 | 52.381 | 4.91 | 0.00 | 0.00 | 5.03 |
4658 | 5107 | 1.135489 | CGTTAACTGGTAGCTGCTCGA | 60.135 | 52.381 | 4.91 | 0.00 | 0.00 | 4.04 |
4659 | 5108 | 2.479730 | CGTTAACTGGTAGCTGCTCGAT | 60.480 | 50.000 | 4.91 | 0.00 | 0.00 | 3.59 |
4660 | 5109 | 3.522553 | GTTAACTGGTAGCTGCTCGATT | 58.477 | 45.455 | 4.91 | 0.00 | 0.00 | 3.34 |
4661 | 5110 | 2.015736 | AACTGGTAGCTGCTCGATTG | 57.984 | 50.000 | 4.91 | 0.00 | 0.00 | 2.67 |
4662 | 5111 | 0.176680 | ACTGGTAGCTGCTCGATTGG | 59.823 | 55.000 | 4.91 | 0.00 | 0.00 | 3.16 |
4663 | 5112 | 1.153369 | TGGTAGCTGCTCGATTGGC | 60.153 | 57.895 | 4.91 | 0.00 | 0.00 | 4.52 |
4664 | 5113 | 1.144936 | GGTAGCTGCTCGATTGGCT | 59.855 | 57.895 | 4.91 | 10.19 | 38.62 | 4.75 |
4665 | 5114 | 1.156645 | GGTAGCTGCTCGATTGGCTG | 61.157 | 60.000 | 4.91 | 6.95 | 36.40 | 4.85 |
4666 | 5115 | 1.144716 | TAGCTGCTCGATTGGCTGG | 59.855 | 57.895 | 4.91 | 1.84 | 36.40 | 4.85 |
4667 | 5116 | 2.930385 | TAGCTGCTCGATTGGCTGGC | 62.930 | 60.000 | 4.91 | 9.74 | 36.40 | 4.85 |
4668 | 5117 | 3.570638 | CTGCTCGATTGGCTGGCG | 61.571 | 66.667 | 0.00 | 0.00 | 0.00 | 5.69 |
4669 | 5118 | 4.081185 | TGCTCGATTGGCTGGCGA | 62.081 | 61.111 | 0.00 | 0.00 | 0.00 | 5.54 |
4671 | 5120 | 2.185350 | CTCGATTGGCTGGCGAGT | 59.815 | 61.111 | 12.81 | 0.00 | 44.59 | 4.18 |
4672 | 5121 | 1.437573 | CTCGATTGGCTGGCGAGTA | 59.562 | 57.895 | 12.81 | 0.00 | 44.59 | 2.59 |
4673 | 5122 | 0.596083 | CTCGATTGGCTGGCGAGTAG | 60.596 | 60.000 | 12.81 | 0.00 | 44.59 | 2.57 |
4674 | 5123 | 1.592669 | CGATTGGCTGGCGAGTAGG | 60.593 | 63.158 | 0.00 | 0.00 | 0.00 | 3.18 |
4675 | 5124 | 1.227674 | GATTGGCTGGCGAGTAGGG | 60.228 | 63.158 | 0.00 | 0.00 | 0.00 | 3.53 |
4676 | 5125 | 2.666596 | GATTGGCTGGCGAGTAGGGG | 62.667 | 65.000 | 0.00 | 0.00 | 0.00 | 4.79 |
4677 | 5126 | 3.916438 | TTGGCTGGCGAGTAGGGGA | 62.916 | 63.158 | 0.00 | 0.00 | 0.00 | 4.81 |
4678 | 5127 | 2.844839 | GGCTGGCGAGTAGGGGAT | 60.845 | 66.667 | 0.00 | 0.00 | 0.00 | 3.85 |
4679 | 5128 | 2.444256 | GGCTGGCGAGTAGGGGATT | 61.444 | 63.158 | 0.00 | 0.00 | 0.00 | 3.01 |
4680 | 5129 | 1.119574 | GGCTGGCGAGTAGGGGATTA | 61.120 | 60.000 | 0.00 | 0.00 | 0.00 | 1.75 |
4681 | 5130 | 0.756903 | GCTGGCGAGTAGGGGATTAA | 59.243 | 55.000 | 0.00 | 0.00 | 0.00 | 1.40 |
4682 | 5131 | 1.348036 | GCTGGCGAGTAGGGGATTAAT | 59.652 | 52.381 | 0.00 | 0.00 | 0.00 | 1.40 |
4683 | 5132 | 2.613223 | GCTGGCGAGTAGGGGATTAATC | 60.613 | 54.545 | 6.93 | 6.93 | 0.00 | 1.75 |
4684 | 5133 | 1.616865 | TGGCGAGTAGGGGATTAATCG | 59.383 | 52.381 | 9.32 | 0.00 | 42.21 | 3.34 |
4685 | 5134 | 1.067071 | GGCGAGTAGGGGATTAATCGG | 60.067 | 57.143 | 9.32 | 0.00 | 40.36 | 4.18 |
4686 | 5135 | 1.617357 | GCGAGTAGGGGATTAATCGGT | 59.383 | 52.381 | 9.32 | 0.00 | 40.36 | 4.69 |
4687 | 5136 | 2.609737 | GCGAGTAGGGGATTAATCGGTG | 60.610 | 54.545 | 9.32 | 0.00 | 40.36 | 4.94 |
4688 | 5137 | 2.889045 | CGAGTAGGGGATTAATCGGTGA | 59.111 | 50.000 | 9.32 | 0.00 | 37.45 | 4.02 |
4689 | 5138 | 3.319972 | CGAGTAGGGGATTAATCGGTGAA | 59.680 | 47.826 | 9.32 | 0.00 | 37.45 | 3.18 |
4690 | 5139 | 4.021368 | CGAGTAGGGGATTAATCGGTGAAT | 60.021 | 45.833 | 9.32 | 0.00 | 37.45 | 2.57 |
4691 | 5140 | 5.480205 | GAGTAGGGGATTAATCGGTGAATC | 58.520 | 45.833 | 9.32 | 0.00 | 0.00 | 2.52 |
4692 | 5141 | 3.402628 | AGGGGATTAATCGGTGAATCG | 57.597 | 47.619 | 9.32 | 0.00 | 33.63 | 3.34 |
4693 | 5142 | 2.038557 | AGGGGATTAATCGGTGAATCGG | 59.961 | 50.000 | 9.32 | 0.00 | 33.63 | 4.18 |
4694 | 5143 | 1.804748 | GGGATTAATCGGTGAATCGGC | 59.195 | 52.381 | 9.32 | 0.00 | 33.63 | 5.54 |
4695 | 5144 | 2.489971 | GGATTAATCGGTGAATCGGCA | 58.510 | 47.619 | 9.32 | 0.00 | 33.63 | 5.69 |
4696 | 5145 | 2.875933 | GGATTAATCGGTGAATCGGCAA | 59.124 | 45.455 | 9.32 | 0.00 | 33.63 | 4.52 |
4697 | 5146 | 3.058914 | GGATTAATCGGTGAATCGGCAAG | 60.059 | 47.826 | 9.32 | 0.00 | 33.63 | 4.01 |
4698 | 5147 | 2.684001 | TAATCGGTGAATCGGCAAGT | 57.316 | 45.000 | 0.00 | 0.00 | 0.00 | 3.16 |
4699 | 5148 | 1.821216 | AATCGGTGAATCGGCAAGTT | 58.179 | 45.000 | 0.00 | 0.00 | 0.00 | 2.66 |
4700 | 5149 | 2.684001 | ATCGGTGAATCGGCAAGTTA | 57.316 | 45.000 | 0.00 | 0.00 | 0.00 | 2.24 |
4701 | 5150 | 2.459060 | TCGGTGAATCGGCAAGTTAA | 57.541 | 45.000 | 0.00 | 0.00 | 0.00 | 2.01 |
4702 | 5151 | 2.980568 | TCGGTGAATCGGCAAGTTAAT | 58.019 | 42.857 | 0.00 | 0.00 | 0.00 | 1.40 |
4703 | 5152 | 2.933906 | TCGGTGAATCGGCAAGTTAATC | 59.066 | 45.455 | 0.00 | 0.00 | 0.00 | 1.75 |
4704 | 5153 | 2.285602 | CGGTGAATCGGCAAGTTAATCG | 60.286 | 50.000 | 0.00 | 0.00 | 0.00 | 3.34 |
4705 | 5154 | 2.031683 | GGTGAATCGGCAAGTTAATCGG | 59.968 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
4706 | 5155 | 1.668751 | TGAATCGGCAAGTTAATCGGC | 59.331 | 47.619 | 0.00 | 0.00 | 0.00 | 5.54 |
4707 | 5156 | 1.002792 | GAATCGGCAAGTTAATCGGCC | 60.003 | 52.381 | 0.00 | 0.00 | 42.98 | 6.13 |
4708 | 5157 | 0.107410 | ATCGGCAAGTTAATCGGCCA | 60.107 | 50.000 | 2.24 | 0.00 | 46.75 | 5.36 |
4709 | 5158 | 0.107410 | TCGGCAAGTTAATCGGCCAT | 60.107 | 50.000 | 2.24 | 0.00 | 46.75 | 4.40 |
4710 | 5159 | 0.738389 | CGGCAAGTTAATCGGCCATT | 59.262 | 50.000 | 2.24 | 4.55 | 46.75 | 3.16 |
4711 | 5160 | 1.134175 | CGGCAAGTTAATCGGCCATTT | 59.866 | 47.619 | 2.24 | 0.00 | 46.75 | 2.32 |
4712 | 5161 | 2.356382 | CGGCAAGTTAATCGGCCATTTA | 59.644 | 45.455 | 2.24 | 0.00 | 46.75 | 1.40 |
4713 | 5162 | 3.181495 | CGGCAAGTTAATCGGCCATTTAA | 60.181 | 43.478 | 2.24 | 3.07 | 46.75 | 1.52 |
4714 | 5163 | 4.499019 | CGGCAAGTTAATCGGCCATTTAAT | 60.499 | 41.667 | 2.24 | 0.00 | 46.75 | 1.40 |
4715 | 5164 | 4.982295 | GGCAAGTTAATCGGCCATTTAATC | 59.018 | 41.667 | 2.24 | 1.98 | 45.70 | 1.75 |
4716 | 5165 | 5.451242 | GGCAAGTTAATCGGCCATTTAATCA | 60.451 | 40.000 | 2.24 | 0.00 | 45.70 | 2.57 |
4717 | 5166 | 6.039616 | GCAAGTTAATCGGCCATTTAATCAA | 58.960 | 36.000 | 2.24 | 0.00 | 0.00 | 2.57 |
4718 | 5167 | 6.701400 | GCAAGTTAATCGGCCATTTAATCAAT | 59.299 | 34.615 | 2.24 | 0.00 | 0.00 | 2.57 |
4719 | 5168 | 7.224557 | GCAAGTTAATCGGCCATTTAATCAATT | 59.775 | 33.333 | 2.24 | 0.00 | 0.00 | 2.32 |
4720 | 5169 | 9.743057 | CAAGTTAATCGGCCATTTAATCAATTA | 57.257 | 29.630 | 2.24 | 0.00 | 0.00 | 1.40 |
4724 | 5173 | 9.619316 | TTAATCGGCCATTTAATCAATTAATCG | 57.381 | 29.630 | 2.24 | 0.00 | 32.78 | 3.34 |
4725 | 5174 | 6.007936 | TCGGCCATTTAATCAATTAATCGG | 57.992 | 37.500 | 2.24 | 2.40 | 32.78 | 4.18 |
4726 | 5175 | 5.048364 | TCGGCCATTTAATCAATTAATCGGG | 60.048 | 40.000 | 2.24 | 7.49 | 32.78 | 5.14 |
4727 | 5176 | 4.929211 | GGCCATTTAATCAATTAATCGGGC | 59.071 | 41.667 | 16.40 | 16.40 | 39.70 | 6.13 |
4728 | 5177 | 4.621034 | GCCATTTAATCAATTAATCGGGCG | 59.379 | 41.667 | 12.66 | 0.00 | 35.44 | 6.13 |
4729 | 5178 | 5.563867 | GCCATTTAATCAATTAATCGGGCGA | 60.564 | 40.000 | 12.66 | 0.00 | 35.44 | 5.54 |
4730 | 5179 | 6.620678 | CCATTTAATCAATTAATCGGGCGAT | 58.379 | 36.000 | 0.00 | 0.00 | 32.78 | 4.58 |
4731 | 5180 | 7.090173 | CCATTTAATCAATTAATCGGGCGATT | 58.910 | 34.615 | 0.00 | 0.00 | 45.58 | 3.34 |
4732 | 5181 | 7.598493 | CCATTTAATCAATTAATCGGGCGATTT | 59.402 | 33.333 | 0.00 | 0.00 | 41.55 | 2.17 |
4733 | 5182 | 8.977505 | CATTTAATCAATTAATCGGGCGATTTT | 58.022 | 29.630 | 0.00 | 0.00 | 41.55 | 1.82 |
4734 | 5183 | 8.934507 | TTTAATCAATTAATCGGGCGATTTTT | 57.065 | 26.923 | 0.00 | 0.00 | 41.55 | 1.94 |
4735 | 5184 | 8.568732 | TTAATCAATTAATCGGGCGATTTTTC | 57.431 | 30.769 | 0.00 | 0.00 | 41.55 | 2.29 |
4736 | 5185 | 5.568685 | TCAATTAATCGGGCGATTTTTCA | 57.431 | 34.783 | 0.00 | 0.00 | 41.55 | 2.69 |
4737 | 5186 | 5.577835 | TCAATTAATCGGGCGATTTTTCAG | 58.422 | 37.500 | 0.00 | 0.00 | 41.55 | 3.02 |
4738 | 5187 | 5.124776 | TCAATTAATCGGGCGATTTTTCAGT | 59.875 | 36.000 | 0.00 | 0.00 | 41.55 | 3.41 |
4739 | 5188 | 5.576447 | ATTAATCGGGCGATTTTTCAGTT | 57.424 | 34.783 | 0.00 | 0.00 | 41.55 | 3.16 |
4740 | 5189 | 3.934457 | AATCGGGCGATTTTTCAGTTT | 57.066 | 38.095 | 0.00 | 0.00 | 41.55 | 2.66 |
4741 | 5190 | 6.497785 | TTAATCGGGCGATTTTTCAGTTTA | 57.502 | 33.333 | 0.00 | 0.00 | 41.55 | 2.01 |
4742 | 5191 | 5.576447 | AATCGGGCGATTTTTCAGTTTAT | 57.424 | 34.783 | 0.00 | 0.00 | 41.55 | 1.40 |
4743 | 5192 | 4.609691 | TCGGGCGATTTTTCAGTTTATC | 57.390 | 40.909 | 0.00 | 0.00 | 0.00 | 1.75 |
4744 | 5193 | 3.062909 | TCGGGCGATTTTTCAGTTTATCG | 59.937 | 43.478 | 0.00 | 0.00 | 41.93 | 2.92 |
4745 | 5194 | 3.691498 | GGGCGATTTTTCAGTTTATCGG | 58.309 | 45.455 | 0.00 | 0.00 | 40.01 | 4.18 |
4747 | 5196 | 4.016113 | GCGATTTTTCAGTTTATCGGCT | 57.984 | 40.909 | 0.00 | 0.00 | 40.01 | 5.52 |
4748 | 5197 | 5.151632 | GCGATTTTTCAGTTTATCGGCTA | 57.848 | 39.130 | 0.00 | 0.00 | 40.01 | 3.93 |
4749 | 5198 | 4.962151 | GCGATTTTTCAGTTTATCGGCTAC | 59.038 | 41.667 | 0.00 | 0.00 | 40.01 | 3.58 |
4750 | 5199 | 5.220605 | GCGATTTTTCAGTTTATCGGCTACT | 60.221 | 40.000 | 0.00 | 0.00 | 40.01 | 2.57 |
4751 | 5200 | 6.411652 | CGATTTTTCAGTTTATCGGCTACTC | 58.588 | 40.000 | 0.00 | 0.00 | 36.99 | 2.59 |
4752 | 5201 | 5.773239 | TTTTTCAGTTTATCGGCTACTCG | 57.227 | 39.130 | 0.00 | 0.00 | 0.00 | 4.18 |
4753 | 5202 | 3.431922 | TTCAGTTTATCGGCTACTCGG | 57.568 | 47.619 | 0.00 | 0.00 | 0.00 | 4.63 |
4754 | 5203 | 2.372264 | TCAGTTTATCGGCTACTCGGT | 58.628 | 47.619 | 0.00 | 0.00 | 0.00 | 4.69 |
4755 | 5204 | 2.098607 | TCAGTTTATCGGCTACTCGGTG | 59.901 | 50.000 | 0.00 | 0.00 | 0.00 | 4.94 |
4756 | 5205 | 2.098607 | CAGTTTATCGGCTACTCGGTGA | 59.901 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
4757 | 5206 | 2.098770 | AGTTTATCGGCTACTCGGTGAC | 59.901 | 50.000 | 0.00 | 0.00 | 0.00 | 3.67 |
4758 | 5207 | 1.027357 | TTATCGGCTACTCGGTGACC | 58.973 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
4759 | 5208 | 0.820891 | TATCGGCTACTCGGTGACCC | 60.821 | 60.000 | 0.00 | 0.00 | 0.00 | 4.46 |
4760 | 5209 | 2.569218 | ATCGGCTACTCGGTGACCCT | 62.569 | 60.000 | 0.00 | 0.00 | 0.00 | 4.34 |
4761 | 5210 | 1.452651 | CGGCTACTCGGTGACCCTA | 60.453 | 63.158 | 0.00 | 0.00 | 0.00 | 3.53 |
4762 | 5211 | 1.722636 | CGGCTACTCGGTGACCCTAC | 61.723 | 65.000 | 0.00 | 0.00 | 0.00 | 3.18 |
4763 | 5212 | 1.722636 | GGCTACTCGGTGACCCTACG | 61.723 | 65.000 | 0.00 | 0.00 | 0.00 | 3.51 |
4764 | 5213 | 0.745845 | GCTACTCGGTGACCCTACGA | 60.746 | 60.000 | 0.00 | 0.00 | 35.14 | 3.43 |
4766 | 5215 | 4.315588 | CTCGGTGACCCTACGAGT | 57.684 | 61.111 | 0.00 | 0.00 | 46.43 | 4.18 |
4767 | 5216 | 3.465990 | CTCGGTGACCCTACGAGTA | 57.534 | 57.895 | 0.00 | 0.00 | 46.43 | 2.59 |
4768 | 5217 | 1.297664 | CTCGGTGACCCTACGAGTAG | 58.702 | 60.000 | 0.00 | 3.39 | 46.43 | 2.57 |
4782 | 5231 | 3.380479 | CGAGTAGGGATTAATCGGCAA | 57.620 | 47.619 | 9.32 | 0.00 | 43.89 | 4.52 |
4783 | 5232 | 3.318017 | CGAGTAGGGATTAATCGGCAAG | 58.682 | 50.000 | 9.32 | 0.00 | 43.89 | 4.01 |
4784 | 5233 | 3.243771 | CGAGTAGGGATTAATCGGCAAGT | 60.244 | 47.826 | 9.32 | 0.00 | 43.89 | 3.16 |
4785 | 5234 | 4.704965 | GAGTAGGGATTAATCGGCAAGTT | 58.295 | 43.478 | 9.32 | 0.00 | 0.00 | 2.66 |
4786 | 5235 | 5.508489 | CGAGTAGGGATTAATCGGCAAGTTA | 60.508 | 44.000 | 9.32 | 0.00 | 43.89 | 2.24 |
4787 | 5236 | 6.243216 | AGTAGGGATTAATCGGCAAGTTAA | 57.757 | 37.500 | 9.32 | 0.00 | 0.00 | 2.01 |
4788 | 5237 | 6.053650 | AGTAGGGATTAATCGGCAAGTTAAC | 58.946 | 40.000 | 9.32 | 0.00 | 0.00 | 2.01 |
4789 | 5238 | 5.112129 | AGGGATTAATCGGCAAGTTAACT | 57.888 | 39.130 | 9.32 | 1.12 | 0.00 | 2.24 |
4790 | 5239 | 4.881850 | AGGGATTAATCGGCAAGTTAACTG | 59.118 | 41.667 | 9.34 | 4.88 | 0.00 | 3.16 |
4791 | 5240 | 4.036380 | GGGATTAATCGGCAAGTTAACTGG | 59.964 | 45.833 | 9.34 | 7.35 | 0.00 | 4.00 |
4792 | 5241 | 4.638865 | GGATTAATCGGCAAGTTAACTGGT | 59.361 | 41.667 | 9.34 | 0.00 | 0.00 | 4.00 |
4793 | 5242 | 5.124936 | GGATTAATCGGCAAGTTAACTGGTT | 59.875 | 40.000 | 9.34 | 1.66 | 0.00 | 3.67 |
4794 | 5243 | 6.316890 | GGATTAATCGGCAAGTTAACTGGTTA | 59.683 | 38.462 | 9.34 | 0.65 | 0.00 | 2.85 |
4795 | 5244 | 7.148205 | GGATTAATCGGCAAGTTAACTGGTTAA | 60.148 | 37.037 | 9.34 | 9.79 | 33.48 | 2.01 |
4796 | 5245 | 7.690952 | TTAATCGGCAAGTTAACTGGTTAAT | 57.309 | 32.000 | 9.34 | 0.00 | 37.37 | 1.40 |
4797 | 5246 | 5.813080 | ATCGGCAAGTTAACTGGTTAATC | 57.187 | 39.130 | 9.34 | 0.00 | 37.37 | 1.75 |
4798 | 5247 | 4.643463 | TCGGCAAGTTAACTGGTTAATCA | 58.357 | 39.130 | 9.34 | 0.00 | 37.37 | 2.57 |
4799 | 5248 | 4.693566 | TCGGCAAGTTAACTGGTTAATCAG | 59.306 | 41.667 | 14.35 | 14.35 | 37.37 | 2.90 |
4800 | 5249 | 4.693566 | CGGCAAGTTAACTGGTTAATCAGA | 59.306 | 41.667 | 22.55 | 0.00 | 37.37 | 3.27 |
4801 | 5250 | 5.354234 | CGGCAAGTTAACTGGTTAATCAGAT | 59.646 | 40.000 | 22.55 | 13.14 | 37.37 | 2.90 |
4802 | 5251 | 6.555315 | GGCAAGTTAACTGGTTAATCAGATG | 58.445 | 40.000 | 22.55 | 11.07 | 37.37 | 2.90 |
4803 | 5252 | 6.374333 | GGCAAGTTAACTGGTTAATCAGATGA | 59.626 | 38.462 | 22.55 | 4.48 | 37.37 | 2.92 |
4804 | 5253 | 7.094377 | GGCAAGTTAACTGGTTAATCAGATGAA | 60.094 | 37.037 | 22.55 | 9.67 | 37.37 | 2.57 |
4805 | 5254 | 8.462016 | GCAAGTTAACTGGTTAATCAGATGAAT | 58.538 | 33.333 | 22.55 | 3.78 | 37.37 | 2.57 |
4808 | 5257 | 9.965902 | AGTTAACTGGTTAATCAGATGAATTCT | 57.034 | 29.630 | 22.55 | 7.89 | 37.37 | 2.40 |
4811 | 5260 | 8.868522 | AACTGGTTAATCAGATGAATTCTTGA | 57.131 | 30.769 | 22.55 | 8.41 | 38.11 | 3.02 |
4812 | 5261 | 8.868522 | ACTGGTTAATCAGATGAATTCTTGAA | 57.131 | 30.769 | 22.55 | 0.00 | 38.11 | 2.69 |
4813 | 5262 | 8.734386 | ACTGGTTAATCAGATGAATTCTTGAAC | 58.266 | 33.333 | 22.55 | 4.14 | 38.11 | 3.18 |
4814 | 5263 | 8.634335 | TGGTTAATCAGATGAATTCTTGAACA | 57.366 | 30.769 | 7.05 | 0.00 | 29.93 | 3.18 |
4815 | 5264 | 8.733458 | TGGTTAATCAGATGAATTCTTGAACAG | 58.267 | 33.333 | 7.05 | 0.00 | 29.93 | 3.16 |
4816 | 5265 | 8.186821 | GGTTAATCAGATGAATTCTTGAACAGG | 58.813 | 37.037 | 7.05 | 0.00 | 29.93 | 4.00 |
4817 | 5266 | 6.770746 | AATCAGATGAATTCTTGAACAGGG | 57.229 | 37.500 | 7.05 | 0.00 | 29.93 | 4.45 |
4818 | 5267 | 4.592942 | TCAGATGAATTCTTGAACAGGGG | 58.407 | 43.478 | 7.05 | 0.00 | 29.93 | 4.79 |
4819 | 5268 | 4.043310 | TCAGATGAATTCTTGAACAGGGGT | 59.957 | 41.667 | 7.05 | 0.00 | 29.93 | 4.95 |
4820 | 5269 | 5.250543 | TCAGATGAATTCTTGAACAGGGGTA | 59.749 | 40.000 | 7.05 | 0.00 | 29.93 | 3.69 |
4821 | 5270 | 6.069440 | TCAGATGAATTCTTGAACAGGGGTAT | 60.069 | 38.462 | 7.05 | 0.00 | 29.93 | 2.73 |
4822 | 5271 | 6.604795 | CAGATGAATTCTTGAACAGGGGTATT | 59.395 | 38.462 | 7.05 | 0.00 | 29.93 | 1.89 |
4823 | 5272 | 7.775093 | CAGATGAATTCTTGAACAGGGGTATTA | 59.225 | 37.037 | 7.05 | 0.00 | 29.93 | 0.98 |
4824 | 5273 | 7.775561 | AGATGAATTCTTGAACAGGGGTATTAC | 59.224 | 37.037 | 7.05 | 0.00 | 0.00 | 1.89 |
4825 | 5274 | 6.785076 | TGAATTCTTGAACAGGGGTATTACA | 58.215 | 36.000 | 7.05 | 0.00 | 0.00 | 2.41 |
4826 | 5275 | 6.657541 | TGAATTCTTGAACAGGGGTATTACAC | 59.342 | 38.462 | 7.05 | 0.00 | 0.00 | 2.90 |
4878 | 5328 | 0.376852 | TGTCTTTGTGTTGCGAGTGC | 59.623 | 50.000 | 0.00 | 0.00 | 43.20 | 4.40 |
4925 | 5375 | 0.890090 | AGCTAGGGCGTAGATCGGTC | 60.890 | 60.000 | 17.84 | 0.00 | 44.37 | 4.79 |
4928 | 5378 | 2.043604 | TAGGGCGTAGATCGGTCGGA | 62.044 | 60.000 | 0.00 | 0.00 | 40.26 | 4.55 |
5000 | 5450 | 0.682852 | ACCCGTGATCCGACAAAGAA | 59.317 | 50.000 | 5.32 | 0.00 | 39.56 | 2.52 |
5178 | 5751 | 0.250209 | GATGGGTGCTCGATCATGCT | 60.250 | 55.000 | 8.15 | 0.00 | 31.87 | 3.79 |
5188 | 5761 | 2.620585 | CTCGATCATGCTGGACTCTGTA | 59.379 | 50.000 | 0.00 | 0.00 | 0.00 | 2.74 |
5336 | 5927 | 3.771160 | CCACTTCGGTAGCGCCCT | 61.771 | 66.667 | 9.99 | 0.00 | 0.00 | 5.19 |
5353 | 5944 | 0.680061 | CCTTGACCTATAGCCGACCC | 59.320 | 60.000 | 0.00 | 0.00 | 0.00 | 4.46 |
5409 | 6000 | 6.777580 | AGAGTGGGCTTAAGATTTTTCAAAGA | 59.222 | 34.615 | 6.67 | 0.00 | 0.00 | 2.52 |
5625 | 6217 | 3.437213 | TCGGAGATGGGACTTCAACTTA | 58.563 | 45.455 | 0.00 | 0.00 | 0.00 | 2.24 |
5633 | 6225 | 4.599041 | TGGGACTTCAACTTATTCCATGG | 58.401 | 43.478 | 4.97 | 4.97 | 0.00 | 3.66 |
5639 | 6231 | 2.091541 | CAACTTATTCCATGGCCGTGT | 58.908 | 47.619 | 23.39 | 7.98 | 0.00 | 4.49 |
5668 | 6260 | 4.701651 | CCCAATTCTGCAACAAGTAGATCA | 59.298 | 41.667 | 0.00 | 0.00 | 38.82 | 2.92 |
5691 | 6283 | 2.952310 | GTGCCTCAATCTTAATGGGGTC | 59.048 | 50.000 | 0.00 | 0.00 | 40.77 | 4.46 |
5849 | 6472 | 0.894835 | TTGTGTATCCGCTCTCTGCA | 59.105 | 50.000 | 0.00 | 0.00 | 43.06 | 4.41 |
5852 | 6475 | 0.676184 | TGTATCCGCTCTCTGCATCC | 59.324 | 55.000 | 0.00 | 0.00 | 43.06 | 3.51 |
5958 | 6581 | 3.533606 | ATGGTCACTTCTCCTCAATCG | 57.466 | 47.619 | 0.00 | 0.00 | 0.00 | 3.34 |
5976 | 6599 | 5.700832 | TCAATCGTACTGCTCTCACAAAATT | 59.299 | 36.000 | 0.00 | 0.00 | 0.00 | 1.82 |
6005 | 6628 | 2.088104 | ACAGGAGGCTGATTATCCGA | 57.912 | 50.000 | 0.00 | 0.00 | 38.20 | 4.55 |
6102 | 6731 | 2.525592 | CAAAACTGCCCTCCCCCA | 59.474 | 61.111 | 0.00 | 0.00 | 0.00 | 4.96 |
6103 | 6732 | 1.079073 | CAAAACTGCCCTCCCCCAT | 59.921 | 57.895 | 0.00 | 0.00 | 0.00 | 4.00 |
6146 | 6775 | 1.202758 | TGATGTCTCACCAAAAGCCGT | 60.203 | 47.619 | 0.00 | 0.00 | 0.00 | 5.68 |
6221 | 6850 | 5.125417 | TGGATCTTTGAAAATTCCATCGTCC | 59.875 | 40.000 | 4.82 | 0.00 | 31.67 | 4.79 |
6222 | 6851 | 5.358160 | GGATCTTTGAAAATTCCATCGTCCT | 59.642 | 40.000 | 0.00 | 0.00 | 0.00 | 3.85 |
6245 | 6874 | 2.632643 | AAGCTCGTGCAATGCTTCA | 58.367 | 47.368 | 12.58 | 0.00 | 42.52 | 3.02 |
6246 | 6875 | 0.520404 | AAGCTCGTGCAATGCTTCAG | 59.480 | 50.000 | 12.58 | 0.08 | 42.52 | 3.02 |
6289 | 6918 | 2.031333 | GGTGCTCAAGCTTCACTTCAAG | 60.031 | 50.000 | 14.36 | 0.00 | 42.66 | 3.02 |
6376 | 7005 | 1.647346 | GACCACAACACGTCAAGTCA | 58.353 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
6495 | 7125 | 3.056821 | TGTGTATGTTCTCCAGTTCCTCG | 60.057 | 47.826 | 0.00 | 0.00 | 0.00 | 4.63 |
6563 | 7194 | 0.958382 | TTATTGTCGTGCCCAGTGCC | 60.958 | 55.000 | 0.00 | 0.00 | 40.16 | 5.01 |
6585 | 7216 | 5.182001 | GCCGCTATATTTGGATGACATCTTT | 59.818 | 40.000 | 14.95 | 1.24 | 0.00 | 2.52 |
6597 | 7228 | 2.483877 | TGACATCTTTGCGACAATCACC | 59.516 | 45.455 | 0.00 | 0.00 | 0.00 | 4.02 |
6617 | 7248 | 1.271163 | CGGCCTCACCCTCAACTTTTA | 60.271 | 52.381 | 0.00 | 0.00 | 33.26 | 1.52 |
6650 | 7281 | 3.877559 | TCATTCCTCTCAATGTCGCATT | 58.122 | 40.909 | 0.09 | 0.09 | 35.56 | 3.56 |
6742 | 7373 | 1.817099 | CGCTCTCCATCCACAAGCC | 60.817 | 63.158 | 0.00 | 0.00 | 0.00 | 4.35 |
6757 | 7389 | 2.224378 | ACAAGCCCATATCATCGACCTG | 60.224 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
6772 | 7404 | 0.839946 | ACCTGATCCCTCCCATTTCG | 59.160 | 55.000 | 0.00 | 0.00 | 0.00 | 3.46 |
6785 | 7419 | 3.252215 | TCCCATTTCGCTTGTACACAAAG | 59.748 | 43.478 | 0.00 | 0.00 | 35.15 | 2.77 |
6790 | 7424 | 0.951558 | CGCTTGTACACAAAGGGCTT | 59.048 | 50.000 | 0.00 | 0.00 | 35.15 | 4.35 |
6822 | 7456 | 1.598130 | GCACACCGCTTTCCTCAGT | 60.598 | 57.895 | 0.00 | 0.00 | 37.77 | 3.41 |
6855 | 7489 | 1.808411 | TTTGTCGAAGCCATCCTCAC | 58.192 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
6947 | 7584 | 4.576463 | GCAATCGATTTTCTAGGACCATGT | 59.424 | 41.667 | 8.21 | 0.00 | 0.00 | 3.21 |
7010 | 7647 | 0.396435 | ATCAACAAGCCGTGGAGACA | 59.604 | 50.000 | 0.00 | 0.00 | 28.41 | 3.41 |
7104 | 7743 | 0.322322 | CCCCAAAGCATGCATTGTGT | 59.678 | 50.000 | 28.16 | 1.92 | 0.00 | 3.72 |
7157 | 7798 | 2.294074 | ACTAGTCTCTCTGCGGTCATC | 58.706 | 52.381 | 0.00 | 0.00 | 0.00 | 2.92 |
7240 | 7881 | 0.394762 | AACCATCGCATCATGCACCT | 60.395 | 50.000 | 11.00 | 0.00 | 45.36 | 4.00 |
7253 | 7894 | 2.725312 | GCACCTCTCCGATGCCTCA | 61.725 | 63.158 | 0.00 | 0.00 | 33.06 | 3.86 |
7288 | 7929 | 8.522830 | ACATATGGTGTATTAATTAAGCATGGC | 58.477 | 33.333 | 18.04 | 0.00 | 39.91 | 4.40 |
7342 | 7984 | 4.044191 | TGATCTAGCATAGCTACACCCCTA | 59.956 | 45.833 | 0.00 | 0.00 | 40.44 | 3.53 |
7405 | 8047 | 2.591753 | CATCTCCACCACCGCCAT | 59.408 | 61.111 | 0.00 | 0.00 | 0.00 | 4.40 |
7482 | 8124 | 2.809861 | CTTCAGGCATGCCTCCACGT | 62.810 | 60.000 | 36.65 | 12.72 | 46.28 | 4.49 |
7521 | 8163 | 2.034124 | GAATGTGCCTATTGCCACCAT | 58.966 | 47.619 | 0.00 | 0.00 | 40.16 | 3.55 |
7584 | 8226 | 0.836400 | CACCCTCGCCTATACCCCAT | 60.836 | 60.000 | 0.00 | 0.00 | 0.00 | 4.00 |
7614 | 8256 | 3.173953 | TGCCATCCTCAGGAACATTTT | 57.826 | 42.857 | 0.00 | 0.00 | 34.34 | 1.82 |
7655 | 8297 | 1.302752 | TTCGCAACCAGCATGCTCT | 60.303 | 52.632 | 19.68 | 2.34 | 46.13 | 4.09 |
7667 | 8309 | 5.104360 | ACCAGCATGCTCTCCTTTTCTATTA | 60.104 | 40.000 | 19.68 | 0.00 | 31.97 | 0.98 |
7713 | 8355 | 4.141597 | TGTCCTATTTTGTCTGTGGTGACA | 60.142 | 41.667 | 0.00 | 0.00 | 44.17 | 3.58 |
7805 | 8447 | 3.467374 | TTCATTTCCTTGGTTGTTGCC | 57.533 | 42.857 | 0.00 | 0.00 | 0.00 | 4.52 |
7841 | 8483 | 5.395324 | GGCCTAAAACTGTGTAGCTCTGATA | 60.395 | 44.000 | 0.00 | 0.00 | 0.00 | 2.15 |
8115 | 8761 | 3.547746 | GTTACAACACCAGACCCTTGAA | 58.452 | 45.455 | 0.00 | 0.00 | 0.00 | 2.69 |
8121 | 8767 | 2.040412 | ACACCAGACCCTTGAAATCTCC | 59.960 | 50.000 | 0.00 | 0.00 | 0.00 | 3.71 |
8150 | 8796 | 4.820775 | AGGTCACTGGTCAGGATACATAT | 58.179 | 43.478 | 2.87 | 0.00 | 41.41 | 1.78 |
8185 | 8831 | 6.500684 | ACAATACAGTGCTCTTTTATGGTG | 57.499 | 37.500 | 0.00 | 0.00 | 0.00 | 4.17 |
8277 | 8924 | 8.431910 | AATAGTTGGGTTAGAAGTAGAGACAA | 57.568 | 34.615 | 0.00 | 0.00 | 0.00 | 3.18 |
8313 | 8960 | 6.317642 | TCGTGGCAAGCAGTATATGTAATTTT | 59.682 | 34.615 | 0.00 | 0.00 | 0.00 | 1.82 |
8317 | 8964 | 7.284261 | TGGCAAGCAGTATATGTAATTTTAGCA | 59.716 | 33.333 | 0.00 | 0.00 | 0.00 | 3.49 |
8414 | 9061 | 3.686016 | TGATAGTGGGTTGCCTCTTTTC | 58.314 | 45.455 | 0.00 | 0.00 | 0.00 | 2.29 |
8416 | 9063 | 0.555769 | AGTGGGTTGCCTCTTTTCCA | 59.444 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
8431 | 9078 | 4.964897 | TCTTTTCCATAGATGAGGAGCTCA | 59.035 | 41.667 | 17.19 | 0.00 | 44.99 | 4.26 |
8631 | 9297 | 1.896220 | CTGCAAAGGACCTGCTACAA | 58.104 | 50.000 | 7.20 | 0.00 | 40.59 | 2.41 |
9345 | 10035 | 4.202430 | GGATAAAATTAAGGAGGGCCGAGA | 60.202 | 45.833 | 0.00 | 0.00 | 39.96 | 4.04 |
9350 | 10040 | 1.120530 | TAAGGAGGGCCGAGATTGTC | 58.879 | 55.000 | 0.00 | 0.00 | 39.96 | 3.18 |
9381 | 10071 | 4.046938 | TCATTTCCTAGACGATGAGCAC | 57.953 | 45.455 | 0.00 | 0.00 | 0.00 | 4.40 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
79 | 80 | 9.277783 | GCTTCATCCACATACAGTAAAATATCT | 57.722 | 33.333 | 0.00 | 0.00 | 0.00 | 1.98 |
80 | 81 | 9.056005 | TGCTTCATCCACATACAGTAAAATATC | 57.944 | 33.333 | 0.00 | 0.00 | 0.00 | 1.63 |
81 | 82 | 8.840321 | GTGCTTCATCCACATACAGTAAAATAT | 58.160 | 33.333 | 0.00 | 0.00 | 33.50 | 1.28 |
82 | 83 | 7.011016 | CGTGCTTCATCCACATACAGTAAAATA | 59.989 | 37.037 | 0.00 | 0.00 | 32.85 | 1.40 |
83 | 84 | 6.183360 | CGTGCTTCATCCACATACAGTAAAAT | 60.183 | 38.462 | 0.00 | 0.00 | 32.85 | 1.82 |
84 | 85 | 5.121611 | CGTGCTTCATCCACATACAGTAAAA | 59.878 | 40.000 | 0.00 | 0.00 | 32.85 | 1.52 |
85 | 86 | 4.629634 | CGTGCTTCATCCACATACAGTAAA | 59.370 | 41.667 | 0.00 | 0.00 | 32.85 | 2.01 |
86 | 87 | 4.180817 | CGTGCTTCATCCACATACAGTAA | 58.819 | 43.478 | 0.00 | 0.00 | 32.85 | 2.24 |
87 | 88 | 3.194755 | ACGTGCTTCATCCACATACAGTA | 59.805 | 43.478 | 0.00 | 0.00 | 32.85 | 2.74 |
88 | 89 | 2.028112 | ACGTGCTTCATCCACATACAGT | 60.028 | 45.455 | 0.00 | 0.00 | 32.85 | 3.55 |
89 | 90 | 2.349580 | CACGTGCTTCATCCACATACAG | 59.650 | 50.000 | 0.82 | 0.00 | 32.85 | 2.74 |
90 | 91 | 2.345876 | CACGTGCTTCATCCACATACA | 58.654 | 47.619 | 0.82 | 0.00 | 32.85 | 2.29 |
91 | 92 | 1.665679 | CCACGTGCTTCATCCACATAC | 59.334 | 52.381 | 10.91 | 0.00 | 32.85 | 2.39 |
92 | 93 | 2.011548 | GCCACGTGCTTCATCCACATA | 61.012 | 52.381 | 10.91 | 0.00 | 36.87 | 2.29 |
93 | 94 | 1.308069 | GCCACGTGCTTCATCCACAT | 61.308 | 55.000 | 10.91 | 0.00 | 36.87 | 3.21 |
94 | 95 | 1.965930 | GCCACGTGCTTCATCCACA | 60.966 | 57.895 | 10.91 | 0.00 | 36.87 | 4.17 |
95 | 96 | 2.870372 | GCCACGTGCTTCATCCAC | 59.130 | 61.111 | 10.91 | 0.00 | 36.87 | 4.02 |
104 | 105 | 0.249031 | AAGCAAAAGAAGCCACGTGC | 60.249 | 50.000 | 10.91 | 5.91 | 41.71 | 5.34 |
105 | 106 | 3.236816 | CATAAGCAAAAGAAGCCACGTG | 58.763 | 45.455 | 9.08 | 9.08 | 0.00 | 4.49 |
106 | 107 | 2.884639 | ACATAAGCAAAAGAAGCCACGT | 59.115 | 40.909 | 0.00 | 0.00 | 0.00 | 4.49 |
107 | 108 | 3.559238 | ACATAAGCAAAAGAAGCCACG | 57.441 | 42.857 | 0.00 | 0.00 | 0.00 | 4.94 |
108 | 109 | 7.707774 | TTAAAACATAAGCAAAAGAAGCCAC | 57.292 | 32.000 | 0.00 | 0.00 | 0.00 | 5.01 |
109 | 110 | 8.900983 | AATTAAAACATAAGCAAAAGAAGCCA | 57.099 | 26.923 | 0.00 | 0.00 | 0.00 | 4.75 |
184 | 185 | 1.154197 | GTAAAGCACCCAACCGTCTC | 58.846 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
204 | 205 | 6.299141 | TCTTCAAGATGGAAGCACTTTAAGT | 58.701 | 36.000 | 0.00 | 0.00 | 43.14 | 2.24 |
251 | 252 | 1.337728 | CGAACTAGTGATGTGGGCACA | 60.338 | 52.381 | 0.00 | 0.00 | 46.44 | 4.57 |
298 | 314 | 2.885644 | CGAAGCATGTCCGGTCCG | 60.886 | 66.667 | 3.60 | 3.60 | 0.00 | 4.79 |
330 | 346 | 3.199946 | TCAAGTACAGGACCCATGATTCC | 59.800 | 47.826 | 0.00 | 0.00 | 0.00 | 3.01 |
345 | 384 | 2.027469 | ACACGGGGAATCCTTCAAGTAC | 60.027 | 50.000 | 0.00 | 0.00 | 0.00 | 2.73 |
370 | 414 | 2.048127 | GGTGCCGTGTGAGAGGAC | 60.048 | 66.667 | 0.00 | 0.00 | 0.00 | 3.85 |
381 | 425 | 1.922135 | CTCCAATCAAACCGGTGCCG | 61.922 | 60.000 | 8.52 | 3.25 | 39.44 | 5.69 |
406 | 450 | 3.735746 | CCGTCCTTTCTTTGAAAATGTGC | 59.264 | 43.478 | 0.00 | 0.00 | 0.00 | 4.57 |
415 | 459 | 4.575885 | TGTATTCTCCCGTCCTTTCTTTG | 58.424 | 43.478 | 0.00 | 0.00 | 0.00 | 2.77 |
416 | 460 | 4.903045 | TGTATTCTCCCGTCCTTTCTTT | 57.097 | 40.909 | 0.00 | 0.00 | 0.00 | 2.52 |
455 | 499 | 1.618616 | CCCGCTTACCCCCTCAAAAAT | 60.619 | 52.381 | 0.00 | 0.00 | 0.00 | 1.82 |
470 | 515 | 1.719063 | ATGGATTGGCATACCCCGCT | 61.719 | 55.000 | 7.76 | 0.00 | 33.59 | 5.52 |
483 | 528 | 2.532843 | AGTGCCTGCAAGAAATGGATT | 58.467 | 42.857 | 0.00 | 0.00 | 34.07 | 3.01 |
485 | 530 | 1.614903 | CAAGTGCCTGCAAGAAATGGA | 59.385 | 47.619 | 0.00 | 0.00 | 34.07 | 3.41 |
503 | 548 | 4.380843 | ACATTAACCATGGTCAGGACAA | 57.619 | 40.909 | 20.07 | 6.18 | 37.17 | 3.18 |
639 | 686 | 9.744468 | ACATAATTAAAACGAAAGCTGAAAAGT | 57.256 | 25.926 | 0.00 | 0.00 | 0.00 | 2.66 |
675 | 725 | 5.221048 | GCACCCAACCATCTGTATTTGTATC | 60.221 | 44.000 | 0.00 | 0.00 | 0.00 | 2.24 |
680 | 730 | 3.168035 | TGCACCCAACCATCTGTATTT | 57.832 | 42.857 | 0.00 | 0.00 | 0.00 | 1.40 |
762 | 856 | 2.886523 | CCAGCATGAAGAGACAAAACCA | 59.113 | 45.455 | 0.00 | 0.00 | 39.69 | 3.67 |
782 | 876 | 3.066760 | AGACAAAACTTTACAGCAGCACC | 59.933 | 43.478 | 0.00 | 0.00 | 0.00 | 5.01 |
783 | 877 | 4.035675 | AGAGACAAAACTTTACAGCAGCAC | 59.964 | 41.667 | 0.00 | 0.00 | 0.00 | 4.40 |
784 | 878 | 4.199310 | AGAGACAAAACTTTACAGCAGCA | 58.801 | 39.130 | 0.00 | 0.00 | 0.00 | 4.41 |
785 | 879 | 4.820284 | AGAGACAAAACTTTACAGCAGC | 57.180 | 40.909 | 0.00 | 0.00 | 0.00 | 5.25 |
786 | 880 | 6.363577 | TGAAGAGACAAAACTTTACAGCAG | 57.636 | 37.500 | 0.00 | 0.00 | 0.00 | 4.24 |
787 | 881 | 6.942532 | ATGAAGAGACAAAACTTTACAGCA | 57.057 | 33.333 | 0.00 | 0.00 | 0.00 | 4.41 |
788 | 882 | 8.012241 | CAGTATGAAGAGACAAAACTTTACAGC | 58.988 | 37.037 | 0.00 | 0.00 | 39.69 | 4.40 |
789 | 883 | 8.499162 | CCAGTATGAAGAGACAAAACTTTACAG | 58.501 | 37.037 | 0.00 | 0.00 | 39.69 | 2.74 |
790 | 884 | 7.990886 | ACCAGTATGAAGAGACAAAACTTTACA | 59.009 | 33.333 | 0.00 | 0.00 | 39.69 | 2.41 |
791 | 885 | 8.283291 | CACCAGTATGAAGAGACAAAACTTTAC | 58.717 | 37.037 | 0.00 | 0.00 | 39.69 | 2.01 |
792 | 886 | 7.041372 | GCACCAGTATGAAGAGACAAAACTTTA | 60.041 | 37.037 | 0.00 | 0.00 | 39.69 | 1.85 |
793 | 887 | 6.238759 | GCACCAGTATGAAGAGACAAAACTTT | 60.239 | 38.462 | 0.00 | 0.00 | 39.69 | 2.66 |
794 | 888 | 5.239525 | GCACCAGTATGAAGAGACAAAACTT | 59.760 | 40.000 | 0.00 | 0.00 | 39.69 | 2.66 |
795 | 889 | 4.757149 | GCACCAGTATGAAGAGACAAAACT | 59.243 | 41.667 | 0.00 | 0.00 | 39.69 | 2.66 |
796 | 890 | 4.757149 | AGCACCAGTATGAAGAGACAAAAC | 59.243 | 41.667 | 0.00 | 0.00 | 39.69 | 2.43 |
797 | 891 | 4.756642 | CAGCACCAGTATGAAGAGACAAAA | 59.243 | 41.667 | 0.00 | 0.00 | 39.69 | 2.44 |
798 | 892 | 4.318332 | CAGCACCAGTATGAAGAGACAAA | 58.682 | 43.478 | 0.00 | 0.00 | 39.69 | 2.83 |
799 | 893 | 3.866066 | GCAGCACCAGTATGAAGAGACAA | 60.866 | 47.826 | 0.00 | 0.00 | 39.69 | 3.18 |
800 | 894 | 2.354103 | GCAGCACCAGTATGAAGAGACA | 60.354 | 50.000 | 0.00 | 0.00 | 39.69 | 3.41 |
801 | 895 | 2.093764 | AGCAGCACCAGTATGAAGAGAC | 60.094 | 50.000 | 0.00 | 0.00 | 39.69 | 3.36 |
802 | 896 | 2.093816 | CAGCAGCACCAGTATGAAGAGA | 60.094 | 50.000 | 0.00 | 0.00 | 39.69 | 3.10 |
803 | 897 | 2.277969 | CAGCAGCACCAGTATGAAGAG | 58.722 | 52.381 | 0.00 | 0.00 | 39.69 | 2.85 |
804 | 898 | 1.625315 | ACAGCAGCACCAGTATGAAGA | 59.375 | 47.619 | 0.00 | 0.00 | 39.69 | 2.87 |
805 | 899 | 2.105006 | ACAGCAGCACCAGTATGAAG | 57.895 | 50.000 | 0.00 | 0.00 | 39.69 | 3.02 |
806 | 900 | 2.831526 | TCTACAGCAGCACCAGTATGAA | 59.168 | 45.455 | 0.00 | 0.00 | 39.69 | 2.57 |
807 | 901 | 2.428530 | CTCTACAGCAGCACCAGTATGA | 59.571 | 50.000 | 0.00 | 0.00 | 39.69 | 2.15 |
808 | 902 | 2.819115 | CTCTACAGCAGCACCAGTATG | 58.181 | 52.381 | 0.00 | 0.00 | 0.00 | 2.39 |
809 | 903 | 1.137872 | GCTCTACAGCAGCACCAGTAT | 59.862 | 52.381 | 0.00 | 0.00 | 46.06 | 2.12 |
810 | 904 | 0.532573 | GCTCTACAGCAGCACCAGTA | 59.467 | 55.000 | 0.00 | 0.00 | 46.06 | 2.74 |
811 | 905 | 1.294780 | GCTCTACAGCAGCACCAGT | 59.705 | 57.895 | 0.00 | 0.00 | 46.06 | 4.00 |
812 | 906 | 4.198625 | GCTCTACAGCAGCACCAG | 57.801 | 61.111 | 0.00 | 0.00 | 46.06 | 4.00 |
843 | 1022 | 3.756434 | CTGAAAGTCGAGGCCCAAATAAA | 59.244 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
1441 | 1670 | 9.719355 | TGTATATATATGCCTACAAACAACCTG | 57.281 | 33.333 | 5.44 | 0.00 | 0.00 | 4.00 |
1727 | 2014 | 3.081554 | GCCCTCTCTTCCTTGGCA | 58.918 | 61.111 | 0.00 | 0.00 | 41.76 | 4.92 |
2073 | 2455 | 1.636148 | ATGTCAGCAAGTTTGGCCAT | 58.364 | 45.000 | 6.09 | 0.00 | 0.00 | 4.40 |
2100 | 2482 | 0.621862 | GTCCCCACCCCAAGAGAGAT | 60.622 | 60.000 | 0.00 | 0.00 | 0.00 | 2.75 |
2307 | 2694 | 8.129001 | ACCATCCACTCCTCCAATATACATATA | 58.871 | 37.037 | 0.00 | 0.00 | 0.00 | 0.86 |
2335 | 2722 | 6.127310 | CCAAGTCTACAGAGCTACCTAAACAT | 60.127 | 42.308 | 0.00 | 0.00 | 0.00 | 2.71 |
2562 | 2952 | 1.457079 | CCCGGACGAACCCCTAGAT | 60.457 | 63.158 | 0.73 | 0.00 | 34.64 | 1.98 |
2588 | 2978 | 0.692419 | ATTGGCCATCGAGGGAGAGT | 60.692 | 55.000 | 22.53 | 0.00 | 38.09 | 3.24 |
2599 | 2989 | 4.325972 | GGATGTCAAAACAAATTGGCCAT | 58.674 | 39.130 | 6.09 | 0.00 | 39.30 | 4.40 |
2610 | 3001 | 1.601914 | GCACAACCGGGATGTCAAAAC | 60.602 | 52.381 | 6.32 | 0.00 | 0.00 | 2.43 |
2632 | 3023 | 0.919780 | AGGGGAAGGGAAAGGGCTAC | 60.920 | 60.000 | 0.00 | 0.00 | 0.00 | 3.58 |
2783 | 3174 | 8.405418 | AGATCATTGTGGGAGATAATGAATTG | 57.595 | 34.615 | 0.00 | 0.00 | 43.18 | 2.32 |
2792 | 3183 | 4.040047 | TGGTGTAGATCATTGTGGGAGAT | 58.960 | 43.478 | 0.00 | 0.00 | 0.00 | 2.75 |
2803 | 3194 | 2.361119 | GCTACGACCATGGTGTAGATCA | 59.639 | 50.000 | 34.63 | 16.58 | 38.23 | 2.92 |
2986 | 3377 | 3.958860 | GTGGTCCCAGGCAGCAGT | 61.959 | 66.667 | 0.00 | 0.00 | 0.00 | 4.40 |
2990 | 3381 | 2.282462 | GTTGGTGGTCCCAGGCAG | 60.282 | 66.667 | 0.00 | 0.00 | 46.31 | 4.85 |
3078 | 3471 | 3.083997 | GTGAGGGGGAGCGACCAT | 61.084 | 66.667 | 5.45 | 0.00 | 41.20 | 3.55 |
3146 | 3540 | 1.610673 | ACATGAGGAGGCGAGGTGT | 60.611 | 57.895 | 0.00 | 0.00 | 0.00 | 4.16 |
3188 | 3590 | 1.885887 | GTGGAGGCAACAAACATGCTA | 59.114 | 47.619 | 0.00 | 0.00 | 43.34 | 3.49 |
3222 | 3625 | 3.833732 | TCTATGCGTAAGTGAGGGAGAT | 58.166 | 45.455 | 0.00 | 0.00 | 41.68 | 2.75 |
3257 | 3660 | 3.433740 | CCTTTAGTGGAGATGGTTAGGGC | 60.434 | 52.174 | 0.00 | 0.00 | 0.00 | 5.19 |
3262 | 3665 | 1.285078 | GGCCCTTTAGTGGAGATGGTT | 59.715 | 52.381 | 0.00 | 0.00 | 0.00 | 3.67 |
3275 | 3682 | 2.284995 | AGAGGAGCGAGGCCCTTT | 60.285 | 61.111 | 0.00 | 0.00 | 31.35 | 3.11 |
3301 | 3708 | 1.342819 | GAGAGCTCCGCTTGGTGATAT | 59.657 | 52.381 | 10.93 | 0.00 | 39.88 | 1.63 |
3347 | 3754 | 2.623878 | TCTTTGACACGGTGGCTTAA | 57.376 | 45.000 | 16.16 | 8.55 | 0.00 | 1.85 |
3414 | 3821 | 4.785453 | CCTTGCAGGACGCCCTCC | 62.785 | 72.222 | 0.00 | 0.00 | 42.02 | 4.30 |
3461 | 3868 | 0.839946 | CTCGGGGATGGGAAAGACAT | 59.160 | 55.000 | 0.00 | 0.00 | 0.00 | 3.06 |
3523 | 3931 | 2.427812 | GGTAGTGGAGAGGAAGTAGCAC | 59.572 | 54.545 | 0.00 | 0.00 | 0.00 | 4.40 |
3528 | 3936 | 0.251653 | TGCGGTAGTGGAGAGGAAGT | 60.252 | 55.000 | 0.00 | 0.00 | 0.00 | 3.01 |
3606 | 4014 | 3.083349 | ACGCTAGCATGGCCTGGA | 61.083 | 61.111 | 16.45 | 0.00 | 40.80 | 3.86 |
3663 | 4071 | 2.160205 | GAACCCAGGCCTTTAGTTGAC | 58.840 | 52.381 | 14.88 | 0.70 | 0.00 | 3.18 |
3677 | 4087 | 1.541310 | AAGGCGTCGAGATGAACCCA | 61.541 | 55.000 | 0.00 | 0.00 | 0.00 | 4.51 |
3714 | 4124 | 2.176798 | TGGTGATGGAGAAACAAACCCT | 59.823 | 45.455 | 0.00 | 0.00 | 32.87 | 4.34 |
3738 | 4148 | 0.822944 | CCATTGCATGGGCCGTATGA | 60.823 | 55.000 | 19.49 | 3.29 | 46.86 | 2.15 |
3853 | 4265 | 1.537202 | ACAATCTTTCCGCACTTCAGC | 59.463 | 47.619 | 0.00 | 0.00 | 0.00 | 4.26 |
3865 | 4277 | 1.156736 | CCAGAACGCCGACAATCTTT | 58.843 | 50.000 | 0.00 | 0.00 | 0.00 | 2.52 |
3866 | 4278 | 0.673644 | CCCAGAACGCCGACAATCTT | 60.674 | 55.000 | 0.00 | 0.00 | 0.00 | 2.40 |
3867 | 4279 | 1.079127 | CCCAGAACGCCGACAATCT | 60.079 | 57.895 | 0.00 | 0.00 | 0.00 | 2.40 |
3868 | 4280 | 0.672401 | TTCCCAGAACGCCGACAATC | 60.672 | 55.000 | 0.00 | 0.00 | 0.00 | 2.67 |
3969 | 4381 | 1.550524 | CCTCGTGAGGGTCTTGAATGA | 59.449 | 52.381 | 8.09 | 0.00 | 44.87 | 2.57 |
4102 | 4514 | 2.580470 | CGATCGTCATGGCTCACGC | 61.580 | 63.158 | 7.03 | 0.00 | 35.93 | 5.34 |
4146 | 4562 | 3.287222 | CACCAAAGAGGAAACAAGGACA | 58.713 | 45.455 | 0.00 | 0.00 | 41.22 | 4.02 |
4209 | 4625 | 3.192422 | TGCACCGATATGGAAACCTTTTG | 59.808 | 43.478 | 0.00 | 0.00 | 42.00 | 2.44 |
4335 | 4752 | 2.567615 | AGGGGACAACTAGTACAAGCTG | 59.432 | 50.000 | 0.00 | 0.00 | 30.17 | 4.24 |
4390 | 4808 | 4.641868 | TGGTCCTCTCCCCAAATATTAGT | 58.358 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
4457 | 4879 | 6.074648 | TCCTTTGATATCTCTCTCTCCCTTC | 58.925 | 44.000 | 3.98 | 0.00 | 0.00 | 3.46 |
4459 | 4881 | 5.375354 | TCTCCTTTGATATCTCTCTCTCCCT | 59.625 | 44.000 | 3.98 | 0.00 | 0.00 | 4.20 |
4460 | 4882 | 5.640147 | TCTCCTTTGATATCTCTCTCTCCC | 58.360 | 45.833 | 3.98 | 0.00 | 0.00 | 4.30 |
4463 | 4885 | 8.230848 | TCCTATCTCCTTTGATATCTCTCTCT | 57.769 | 38.462 | 3.98 | 0.00 | 0.00 | 3.10 |
4464 | 4886 | 9.125026 | GATCCTATCTCCTTTGATATCTCTCTC | 57.875 | 40.741 | 3.98 | 0.00 | 0.00 | 3.20 |
4465 | 4887 | 8.849844 | AGATCCTATCTCCTTTGATATCTCTCT | 58.150 | 37.037 | 3.98 | 0.00 | 33.42 | 3.10 |
4509 | 4958 | 0.682532 | TTCTTGTGCTTGGTGTGCCA | 60.683 | 50.000 | 0.00 | 0.00 | 44.38 | 4.92 |
4563 | 5012 | 2.041485 | TCTTGGGCTGATGATGAACCAA | 59.959 | 45.455 | 0.00 | 0.00 | 36.62 | 3.67 |
4564 | 5013 | 1.634973 | TCTTGGGCTGATGATGAACCA | 59.365 | 47.619 | 0.00 | 0.00 | 0.00 | 3.67 |
4565 | 5014 | 2.295885 | CTCTTGGGCTGATGATGAACC | 58.704 | 52.381 | 0.00 | 0.00 | 0.00 | 3.62 |
4587 | 5036 | 1.059584 | AGTGTGGTGGTGGTGGATCA | 61.060 | 55.000 | 0.00 | 0.00 | 0.00 | 2.92 |
4588 | 5037 | 0.606401 | CAGTGTGGTGGTGGTGGATC | 60.606 | 60.000 | 0.00 | 0.00 | 0.00 | 3.36 |
4616 | 5065 | 6.611381 | ACGATTTCCTCAACAATGTGTAATG | 58.389 | 36.000 | 0.00 | 0.00 | 0.00 | 1.90 |
4624 | 5073 | 5.768164 | ACCAGTTAACGATTTCCTCAACAAT | 59.232 | 36.000 | 0.00 | 0.00 | 0.00 | 2.71 |
4625 | 5074 | 5.127491 | ACCAGTTAACGATTTCCTCAACAA | 58.873 | 37.500 | 0.00 | 0.00 | 0.00 | 2.83 |
4626 | 5075 | 4.710324 | ACCAGTTAACGATTTCCTCAACA | 58.290 | 39.130 | 0.00 | 0.00 | 0.00 | 3.33 |
4627 | 5076 | 5.163884 | GCTACCAGTTAACGATTTCCTCAAC | 60.164 | 44.000 | 0.00 | 0.00 | 0.00 | 3.18 |
4628 | 5077 | 4.933400 | GCTACCAGTTAACGATTTCCTCAA | 59.067 | 41.667 | 0.00 | 0.00 | 0.00 | 3.02 |
4629 | 5078 | 4.222145 | AGCTACCAGTTAACGATTTCCTCA | 59.778 | 41.667 | 0.00 | 0.00 | 0.00 | 3.86 |
4630 | 5079 | 4.567159 | CAGCTACCAGTTAACGATTTCCTC | 59.433 | 45.833 | 0.00 | 0.00 | 0.00 | 3.71 |
4631 | 5080 | 4.504858 | CAGCTACCAGTTAACGATTTCCT | 58.495 | 43.478 | 0.00 | 0.00 | 0.00 | 3.36 |
4632 | 5081 | 3.063588 | GCAGCTACCAGTTAACGATTTCC | 59.936 | 47.826 | 0.00 | 0.00 | 0.00 | 3.13 |
4633 | 5082 | 3.933332 | AGCAGCTACCAGTTAACGATTTC | 59.067 | 43.478 | 0.00 | 0.00 | 0.00 | 2.17 |
4634 | 5083 | 3.933332 | GAGCAGCTACCAGTTAACGATTT | 59.067 | 43.478 | 0.00 | 0.00 | 0.00 | 2.17 |
4635 | 5084 | 3.522553 | GAGCAGCTACCAGTTAACGATT | 58.477 | 45.455 | 0.00 | 0.00 | 0.00 | 3.34 |
4636 | 5085 | 2.479730 | CGAGCAGCTACCAGTTAACGAT | 60.480 | 50.000 | 0.00 | 0.00 | 0.00 | 3.73 |
4637 | 5086 | 1.135489 | CGAGCAGCTACCAGTTAACGA | 60.135 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
4638 | 5087 | 1.135489 | TCGAGCAGCTACCAGTTAACG | 60.135 | 52.381 | 0.00 | 0.00 | 0.00 | 3.18 |
4639 | 5088 | 2.649331 | TCGAGCAGCTACCAGTTAAC | 57.351 | 50.000 | 0.00 | 0.00 | 0.00 | 2.01 |
4640 | 5089 | 3.521560 | CAATCGAGCAGCTACCAGTTAA | 58.478 | 45.455 | 0.00 | 0.00 | 0.00 | 2.01 |
4641 | 5090 | 2.159099 | CCAATCGAGCAGCTACCAGTTA | 60.159 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
4642 | 5091 | 1.406069 | CCAATCGAGCAGCTACCAGTT | 60.406 | 52.381 | 0.00 | 0.00 | 0.00 | 3.16 |
4643 | 5092 | 0.176680 | CCAATCGAGCAGCTACCAGT | 59.823 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
4644 | 5093 | 1.156645 | GCCAATCGAGCAGCTACCAG | 61.157 | 60.000 | 0.00 | 0.00 | 0.00 | 4.00 |
4645 | 5094 | 1.153369 | GCCAATCGAGCAGCTACCA | 60.153 | 57.895 | 0.00 | 0.00 | 0.00 | 3.25 |
4646 | 5095 | 1.144936 | AGCCAATCGAGCAGCTACC | 59.855 | 57.895 | 0.00 | 0.00 | 32.73 | 3.18 |
4647 | 5096 | 1.156645 | CCAGCCAATCGAGCAGCTAC | 61.157 | 60.000 | 0.00 | 0.00 | 33.33 | 3.58 |
4648 | 5097 | 1.144716 | CCAGCCAATCGAGCAGCTA | 59.855 | 57.895 | 0.00 | 0.00 | 33.33 | 3.32 |
4649 | 5098 | 2.124819 | CCAGCCAATCGAGCAGCT | 60.125 | 61.111 | 0.00 | 0.00 | 35.52 | 4.24 |
4650 | 5099 | 3.885521 | GCCAGCCAATCGAGCAGC | 61.886 | 66.667 | 0.00 | 0.00 | 0.00 | 5.25 |
4651 | 5100 | 3.570638 | CGCCAGCCAATCGAGCAG | 61.571 | 66.667 | 0.00 | 0.00 | 0.00 | 4.24 |
4652 | 5101 | 4.081185 | TCGCCAGCCAATCGAGCA | 62.081 | 61.111 | 0.00 | 0.00 | 0.00 | 4.26 |
4653 | 5102 | 3.267860 | CTCGCCAGCCAATCGAGC | 61.268 | 66.667 | 0.00 | 0.00 | 42.28 | 5.03 |
4655 | 5104 | 1.437573 | CTACTCGCCAGCCAATCGA | 59.562 | 57.895 | 0.00 | 0.00 | 0.00 | 3.59 |
4656 | 5105 | 1.592669 | CCTACTCGCCAGCCAATCG | 60.593 | 63.158 | 0.00 | 0.00 | 0.00 | 3.34 |
4657 | 5106 | 1.227674 | CCCTACTCGCCAGCCAATC | 60.228 | 63.158 | 0.00 | 0.00 | 0.00 | 2.67 |
4658 | 5107 | 2.746375 | CCCCTACTCGCCAGCCAAT | 61.746 | 63.158 | 0.00 | 0.00 | 0.00 | 3.16 |
4659 | 5108 | 3.399181 | CCCCTACTCGCCAGCCAA | 61.399 | 66.667 | 0.00 | 0.00 | 0.00 | 4.52 |
4660 | 5109 | 3.696518 | ATCCCCTACTCGCCAGCCA | 62.697 | 63.158 | 0.00 | 0.00 | 0.00 | 4.75 |
4661 | 5110 | 1.119574 | TAATCCCCTACTCGCCAGCC | 61.120 | 60.000 | 0.00 | 0.00 | 0.00 | 4.85 |
4662 | 5111 | 0.756903 | TTAATCCCCTACTCGCCAGC | 59.243 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
4663 | 5112 | 2.352814 | CGATTAATCCCCTACTCGCCAG | 60.353 | 54.545 | 9.87 | 0.00 | 0.00 | 4.85 |
4664 | 5113 | 1.616865 | CGATTAATCCCCTACTCGCCA | 59.383 | 52.381 | 9.87 | 0.00 | 0.00 | 5.69 |
4665 | 5114 | 1.067071 | CCGATTAATCCCCTACTCGCC | 60.067 | 57.143 | 9.87 | 0.00 | 0.00 | 5.54 |
4666 | 5115 | 1.617357 | ACCGATTAATCCCCTACTCGC | 59.383 | 52.381 | 9.87 | 0.00 | 0.00 | 5.03 |
4667 | 5116 | 2.889045 | TCACCGATTAATCCCCTACTCG | 59.111 | 50.000 | 9.87 | 0.00 | 0.00 | 4.18 |
4668 | 5117 | 4.950205 | TTCACCGATTAATCCCCTACTC | 57.050 | 45.455 | 9.87 | 0.00 | 0.00 | 2.59 |
4669 | 5118 | 4.021368 | CGATTCACCGATTAATCCCCTACT | 60.021 | 45.833 | 9.87 | 0.00 | 0.00 | 2.57 |
4670 | 5119 | 4.243270 | CGATTCACCGATTAATCCCCTAC | 58.757 | 47.826 | 9.87 | 0.00 | 0.00 | 3.18 |
4671 | 5120 | 3.259876 | CCGATTCACCGATTAATCCCCTA | 59.740 | 47.826 | 9.87 | 0.00 | 0.00 | 3.53 |
4672 | 5121 | 2.038557 | CCGATTCACCGATTAATCCCCT | 59.961 | 50.000 | 9.87 | 0.00 | 0.00 | 4.79 |
4673 | 5122 | 2.423577 | CCGATTCACCGATTAATCCCC | 58.576 | 52.381 | 9.87 | 0.00 | 0.00 | 4.81 |
4674 | 5123 | 1.804748 | GCCGATTCACCGATTAATCCC | 59.195 | 52.381 | 9.87 | 0.00 | 0.00 | 3.85 |
4675 | 5124 | 2.489971 | TGCCGATTCACCGATTAATCC | 58.510 | 47.619 | 9.87 | 0.00 | 0.00 | 3.01 |
4676 | 5125 | 3.560068 | ACTTGCCGATTCACCGATTAATC | 59.440 | 43.478 | 5.30 | 5.30 | 0.00 | 1.75 |
4677 | 5126 | 3.541632 | ACTTGCCGATTCACCGATTAAT | 58.458 | 40.909 | 0.00 | 0.00 | 0.00 | 1.40 |
4678 | 5127 | 2.980568 | ACTTGCCGATTCACCGATTAA | 58.019 | 42.857 | 0.00 | 0.00 | 0.00 | 1.40 |
4679 | 5128 | 2.684001 | ACTTGCCGATTCACCGATTA | 57.316 | 45.000 | 0.00 | 0.00 | 0.00 | 1.75 |
4680 | 5129 | 1.821216 | AACTTGCCGATTCACCGATT | 58.179 | 45.000 | 0.00 | 0.00 | 0.00 | 3.34 |
4681 | 5130 | 2.684001 | TAACTTGCCGATTCACCGAT | 57.316 | 45.000 | 0.00 | 0.00 | 0.00 | 4.18 |
4682 | 5131 | 2.459060 | TTAACTTGCCGATTCACCGA | 57.541 | 45.000 | 0.00 | 0.00 | 0.00 | 4.69 |
4683 | 5132 | 2.285602 | CGATTAACTTGCCGATTCACCG | 60.286 | 50.000 | 0.00 | 0.00 | 0.00 | 4.94 |
4684 | 5133 | 2.031683 | CCGATTAACTTGCCGATTCACC | 59.968 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
4685 | 5134 | 2.538939 | GCCGATTAACTTGCCGATTCAC | 60.539 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
4686 | 5135 | 1.668751 | GCCGATTAACTTGCCGATTCA | 59.331 | 47.619 | 0.00 | 0.00 | 0.00 | 2.57 |
4687 | 5136 | 1.002792 | GGCCGATTAACTTGCCGATTC | 60.003 | 52.381 | 0.00 | 0.00 | 33.59 | 2.52 |
4688 | 5137 | 1.021968 | GGCCGATTAACTTGCCGATT | 58.978 | 50.000 | 0.00 | 0.00 | 33.59 | 3.34 |
4689 | 5138 | 2.702847 | GGCCGATTAACTTGCCGAT | 58.297 | 52.632 | 0.00 | 0.00 | 33.59 | 4.18 |
4690 | 5139 | 4.211986 | GGCCGATTAACTTGCCGA | 57.788 | 55.556 | 0.00 | 0.00 | 33.59 | 5.54 |
4692 | 5141 | 2.959507 | AAATGGCCGATTAACTTGCC | 57.040 | 45.000 | 0.00 | 4.44 | 44.27 | 4.52 |
4693 | 5142 | 5.587289 | TGATTAAATGGCCGATTAACTTGC | 58.413 | 37.500 | 13.26 | 6.21 | 0.00 | 4.01 |
4694 | 5143 | 8.647143 | AATTGATTAAATGGCCGATTAACTTG | 57.353 | 30.769 | 13.26 | 0.00 | 0.00 | 3.16 |
4698 | 5147 | 9.619316 | CGATTAATTGATTAAATGGCCGATTAA | 57.381 | 29.630 | 13.33 | 13.33 | 36.02 | 1.40 |
4699 | 5148 | 8.240682 | CCGATTAATTGATTAAATGGCCGATTA | 58.759 | 33.333 | 4.10 | 0.00 | 36.02 | 1.75 |
4700 | 5149 | 7.090173 | CCGATTAATTGATTAAATGGCCGATT | 58.910 | 34.615 | 4.10 | 0.00 | 36.02 | 3.34 |
4701 | 5150 | 6.350110 | CCCGATTAATTGATTAAATGGCCGAT | 60.350 | 38.462 | 4.10 | 0.00 | 36.02 | 4.18 |
4702 | 5151 | 5.048364 | CCCGATTAATTGATTAAATGGCCGA | 60.048 | 40.000 | 4.10 | 0.00 | 36.02 | 5.54 |
4703 | 5152 | 5.160641 | CCCGATTAATTGATTAAATGGCCG | 58.839 | 41.667 | 4.10 | 0.00 | 36.02 | 6.13 |
4704 | 5153 | 4.929211 | GCCCGATTAATTGATTAAATGGCC | 59.071 | 41.667 | 15.87 | 0.00 | 37.77 | 5.36 |
4705 | 5154 | 4.621034 | CGCCCGATTAATTGATTAAATGGC | 59.379 | 41.667 | 16.34 | 16.34 | 38.92 | 4.40 |
4706 | 5155 | 6.007936 | TCGCCCGATTAATTGATTAAATGG | 57.992 | 37.500 | 4.10 | 5.65 | 36.02 | 3.16 |
4707 | 5156 | 8.519492 | AAATCGCCCGATTAATTGATTAAATG | 57.481 | 30.769 | 15.33 | 0.00 | 43.26 | 2.32 |
4708 | 5157 | 9.541143 | AAAAATCGCCCGATTAATTGATTAAAT | 57.459 | 25.926 | 15.33 | 0.00 | 43.26 | 1.40 |
4709 | 5158 | 8.934507 | AAAAATCGCCCGATTAATTGATTAAA | 57.065 | 26.923 | 15.33 | 0.00 | 43.26 | 1.52 |
4710 | 5159 | 8.191446 | TGAAAAATCGCCCGATTAATTGATTAA | 58.809 | 29.630 | 15.33 | 0.00 | 43.26 | 1.40 |
4711 | 5160 | 7.708051 | TGAAAAATCGCCCGATTAATTGATTA | 58.292 | 30.769 | 15.33 | 0.00 | 43.26 | 1.75 |
4712 | 5161 | 6.568869 | TGAAAAATCGCCCGATTAATTGATT | 58.431 | 32.000 | 15.33 | 3.66 | 43.26 | 2.57 |
4713 | 5162 | 6.142818 | TGAAAAATCGCCCGATTAATTGAT | 57.857 | 33.333 | 15.33 | 0.00 | 43.26 | 2.57 |
4714 | 5163 | 5.124776 | ACTGAAAAATCGCCCGATTAATTGA | 59.875 | 36.000 | 15.33 | 8.11 | 43.26 | 2.57 |
4715 | 5164 | 5.339990 | ACTGAAAAATCGCCCGATTAATTG | 58.660 | 37.500 | 15.33 | 8.41 | 43.26 | 2.32 |
4716 | 5165 | 5.576447 | ACTGAAAAATCGCCCGATTAATT | 57.424 | 34.783 | 15.33 | 13.20 | 43.26 | 1.40 |
4717 | 5166 | 5.576447 | AACTGAAAAATCGCCCGATTAAT | 57.424 | 34.783 | 15.33 | 8.14 | 43.26 | 1.40 |
4718 | 5167 | 5.379732 | AAACTGAAAAATCGCCCGATTAA | 57.620 | 34.783 | 15.33 | 3.04 | 43.26 | 1.40 |
4719 | 5168 | 6.510478 | CGATAAACTGAAAAATCGCCCGATTA | 60.510 | 38.462 | 15.33 | 0.67 | 43.26 | 1.75 |
4720 | 5169 | 3.934457 | AAACTGAAAAATCGCCCGATT | 57.066 | 38.095 | 9.88 | 9.88 | 45.67 | 3.34 |
4721 | 5170 | 4.260620 | CGATAAACTGAAAAATCGCCCGAT | 60.261 | 41.667 | 0.00 | 0.00 | 35.36 | 4.18 |
4722 | 5171 | 3.062909 | CGATAAACTGAAAAATCGCCCGA | 59.937 | 43.478 | 0.00 | 0.00 | 35.36 | 5.14 |
4723 | 5172 | 3.350912 | CGATAAACTGAAAAATCGCCCG | 58.649 | 45.455 | 0.00 | 0.00 | 35.36 | 6.13 |
4724 | 5173 | 3.691498 | CCGATAAACTGAAAAATCGCCC | 58.309 | 45.455 | 0.00 | 0.00 | 39.81 | 6.13 |
4725 | 5174 | 3.105937 | GCCGATAAACTGAAAAATCGCC | 58.894 | 45.455 | 0.00 | 0.00 | 39.81 | 5.54 |
4726 | 5175 | 4.016113 | AGCCGATAAACTGAAAAATCGC | 57.984 | 40.909 | 0.00 | 0.00 | 39.81 | 4.58 |
4727 | 5176 | 6.345920 | AGTAGCCGATAAACTGAAAAATCG | 57.654 | 37.500 | 0.00 | 0.00 | 40.60 | 3.34 |
4728 | 5177 | 6.411652 | CGAGTAGCCGATAAACTGAAAAATC | 58.588 | 40.000 | 0.00 | 0.00 | 0.00 | 2.17 |
4729 | 5178 | 5.293569 | CCGAGTAGCCGATAAACTGAAAAAT | 59.706 | 40.000 | 0.00 | 0.00 | 0.00 | 1.82 |
4730 | 5179 | 4.628333 | CCGAGTAGCCGATAAACTGAAAAA | 59.372 | 41.667 | 0.00 | 0.00 | 0.00 | 1.94 |
4731 | 5180 | 4.178540 | CCGAGTAGCCGATAAACTGAAAA | 58.821 | 43.478 | 0.00 | 0.00 | 0.00 | 2.29 |
4732 | 5181 | 3.194116 | ACCGAGTAGCCGATAAACTGAAA | 59.806 | 43.478 | 0.00 | 0.00 | 0.00 | 2.69 |
4733 | 5182 | 2.756760 | ACCGAGTAGCCGATAAACTGAA | 59.243 | 45.455 | 0.00 | 0.00 | 0.00 | 3.02 |
4734 | 5183 | 2.098607 | CACCGAGTAGCCGATAAACTGA | 59.901 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
4735 | 5184 | 2.098607 | TCACCGAGTAGCCGATAAACTG | 59.901 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
4736 | 5185 | 2.098770 | GTCACCGAGTAGCCGATAAACT | 59.901 | 50.000 | 0.00 | 0.00 | 0.00 | 2.66 |
4737 | 5186 | 2.457970 | GTCACCGAGTAGCCGATAAAC | 58.542 | 52.381 | 0.00 | 0.00 | 0.00 | 2.01 |
4738 | 5187 | 1.406539 | GGTCACCGAGTAGCCGATAAA | 59.593 | 52.381 | 0.00 | 0.00 | 0.00 | 1.40 |
4739 | 5188 | 1.027357 | GGTCACCGAGTAGCCGATAA | 58.973 | 55.000 | 0.00 | 0.00 | 0.00 | 1.75 |
4740 | 5189 | 0.820891 | GGGTCACCGAGTAGCCGATA | 60.821 | 60.000 | 0.00 | 0.00 | 0.00 | 2.92 |
4741 | 5190 | 2.125961 | GGGTCACCGAGTAGCCGAT | 61.126 | 63.158 | 0.00 | 0.00 | 0.00 | 4.18 |
4742 | 5191 | 1.913951 | TAGGGTCACCGAGTAGCCGA | 61.914 | 60.000 | 0.00 | 0.00 | 43.47 | 5.54 |
4743 | 5192 | 1.452651 | TAGGGTCACCGAGTAGCCG | 60.453 | 63.158 | 0.00 | 0.00 | 43.47 | 5.52 |
4744 | 5193 | 1.722636 | CGTAGGGTCACCGAGTAGCC | 61.723 | 65.000 | 0.00 | 0.00 | 43.47 | 3.93 |
4745 | 5194 | 0.745845 | TCGTAGGGTCACCGAGTAGC | 60.746 | 60.000 | 0.00 | 0.00 | 43.47 | 3.58 |
4746 | 5195 | 1.297664 | CTCGTAGGGTCACCGAGTAG | 58.702 | 60.000 | 0.00 | 0.00 | 42.26 | 2.57 |
4747 | 5196 | 3.465990 | CTCGTAGGGTCACCGAGTA | 57.534 | 57.895 | 0.00 | 0.00 | 42.26 | 2.59 |
4748 | 5197 | 4.315588 | CTCGTAGGGTCACCGAGT | 57.684 | 61.111 | 0.00 | 0.00 | 42.26 | 4.18 |
4750 | 5199 | 0.107508 | CCTACTCGTAGGGTCACCGA | 60.108 | 60.000 | 14.08 | 0.00 | 46.96 | 4.69 |
4751 | 5200 | 2.401967 | CCTACTCGTAGGGTCACCG | 58.598 | 63.158 | 14.08 | 0.00 | 46.96 | 4.94 |
4759 | 5208 | 3.504906 | TGCCGATTAATCCCTACTCGTAG | 59.495 | 47.826 | 9.87 | 0.00 | 32.34 | 3.51 |
4760 | 5209 | 3.489355 | TGCCGATTAATCCCTACTCGTA | 58.511 | 45.455 | 9.87 | 0.00 | 32.34 | 3.43 |
4761 | 5210 | 2.313317 | TGCCGATTAATCCCTACTCGT | 58.687 | 47.619 | 9.87 | 0.00 | 32.34 | 4.18 |
4762 | 5211 | 3.243771 | ACTTGCCGATTAATCCCTACTCG | 60.244 | 47.826 | 9.87 | 0.00 | 33.64 | 4.18 |
4763 | 5212 | 4.338379 | ACTTGCCGATTAATCCCTACTC | 57.662 | 45.455 | 9.87 | 0.00 | 0.00 | 2.59 |
4764 | 5213 | 4.772886 | AACTTGCCGATTAATCCCTACT | 57.227 | 40.909 | 9.87 | 0.00 | 0.00 | 2.57 |
4765 | 5214 | 6.018180 | CAGTTAACTTGCCGATTAATCCCTAC | 60.018 | 42.308 | 5.07 | 0.00 | 0.00 | 3.18 |
4766 | 5215 | 6.053005 | CAGTTAACTTGCCGATTAATCCCTA | 58.947 | 40.000 | 5.07 | 0.00 | 0.00 | 3.53 |
4767 | 5216 | 4.881850 | CAGTTAACTTGCCGATTAATCCCT | 59.118 | 41.667 | 5.07 | 0.00 | 0.00 | 4.20 |
4768 | 5217 | 4.036380 | CCAGTTAACTTGCCGATTAATCCC | 59.964 | 45.833 | 5.07 | 2.26 | 0.00 | 3.85 |
4769 | 5218 | 4.638865 | ACCAGTTAACTTGCCGATTAATCC | 59.361 | 41.667 | 5.07 | 0.00 | 0.00 | 3.01 |
4770 | 5219 | 5.813080 | ACCAGTTAACTTGCCGATTAATC | 57.187 | 39.130 | 5.07 | 5.30 | 0.00 | 1.75 |
4771 | 5220 | 7.690952 | TTAACCAGTTAACTTGCCGATTAAT | 57.309 | 32.000 | 5.07 | 0.00 | 30.78 | 1.40 |
4772 | 5221 | 7.390996 | TGATTAACCAGTTAACTTGCCGATTAA | 59.609 | 33.333 | 5.07 | 4.36 | 37.80 | 1.40 |
4773 | 5222 | 6.879993 | TGATTAACCAGTTAACTTGCCGATTA | 59.120 | 34.615 | 5.07 | 0.00 | 37.80 | 1.75 |
4774 | 5223 | 5.708230 | TGATTAACCAGTTAACTTGCCGATT | 59.292 | 36.000 | 5.07 | 0.00 | 37.80 | 3.34 |
4775 | 5224 | 5.250200 | TGATTAACCAGTTAACTTGCCGAT | 58.750 | 37.500 | 5.07 | 0.00 | 37.80 | 4.18 |
4776 | 5225 | 4.643463 | TGATTAACCAGTTAACTTGCCGA | 58.357 | 39.130 | 5.07 | 0.00 | 37.80 | 5.54 |
4777 | 5226 | 4.693566 | TCTGATTAACCAGTTAACTTGCCG | 59.306 | 41.667 | 5.07 | 0.00 | 37.80 | 5.69 |
4778 | 5227 | 6.374333 | TCATCTGATTAACCAGTTAACTTGCC | 59.626 | 38.462 | 5.07 | 0.00 | 37.80 | 4.52 |
4779 | 5228 | 7.377766 | TCATCTGATTAACCAGTTAACTTGC | 57.622 | 36.000 | 5.07 | 0.00 | 37.80 | 4.01 |
4782 | 5231 | 9.965902 | AGAATTCATCTGATTAACCAGTTAACT | 57.034 | 29.630 | 8.44 | 1.12 | 36.08 | 2.24 |
4785 | 5234 | 9.958180 | TCAAGAATTCATCTGATTAACCAGTTA | 57.042 | 29.630 | 8.44 | 0.00 | 38.79 | 2.24 |
4786 | 5235 | 8.868522 | TCAAGAATTCATCTGATTAACCAGTT | 57.131 | 30.769 | 8.44 | 0.00 | 38.79 | 3.16 |
4787 | 5236 | 8.734386 | GTTCAAGAATTCATCTGATTAACCAGT | 58.266 | 33.333 | 8.44 | 0.00 | 38.79 | 4.00 |
4788 | 5237 | 8.733458 | TGTTCAAGAATTCATCTGATTAACCAG | 58.267 | 33.333 | 8.44 | 0.00 | 38.79 | 4.00 |
4789 | 5238 | 8.634335 | TGTTCAAGAATTCATCTGATTAACCA | 57.366 | 30.769 | 8.44 | 0.00 | 38.79 | 3.67 |
4790 | 5239 | 8.186821 | CCTGTTCAAGAATTCATCTGATTAACC | 58.813 | 37.037 | 8.44 | 0.00 | 38.79 | 2.85 |
4791 | 5240 | 8.186821 | CCCTGTTCAAGAATTCATCTGATTAAC | 58.813 | 37.037 | 8.44 | 3.99 | 38.79 | 2.01 |
4792 | 5241 | 7.340232 | CCCCTGTTCAAGAATTCATCTGATTAA | 59.660 | 37.037 | 8.44 | 0.00 | 38.79 | 1.40 |
4793 | 5242 | 6.830324 | CCCCTGTTCAAGAATTCATCTGATTA | 59.170 | 38.462 | 8.44 | 0.03 | 38.79 | 1.75 |
4794 | 5243 | 5.655532 | CCCCTGTTCAAGAATTCATCTGATT | 59.344 | 40.000 | 8.44 | 0.00 | 38.79 | 2.57 |
4795 | 5244 | 5.198965 | CCCCTGTTCAAGAATTCATCTGAT | 58.801 | 41.667 | 8.44 | 0.00 | 38.79 | 2.90 |
4796 | 5245 | 4.043310 | ACCCCTGTTCAAGAATTCATCTGA | 59.957 | 41.667 | 8.44 | 4.63 | 38.79 | 3.27 |
4797 | 5246 | 4.338879 | ACCCCTGTTCAAGAATTCATCTG | 58.661 | 43.478 | 8.44 | 2.20 | 38.79 | 2.90 |
4798 | 5247 | 4.664688 | ACCCCTGTTCAAGAATTCATCT | 57.335 | 40.909 | 8.44 | 0.00 | 41.32 | 2.90 |
4799 | 5248 | 7.556275 | TGTAATACCCCTGTTCAAGAATTCATC | 59.444 | 37.037 | 8.44 | 0.00 | 0.00 | 2.92 |
4800 | 5249 | 7.339466 | GTGTAATACCCCTGTTCAAGAATTCAT | 59.661 | 37.037 | 8.44 | 0.00 | 0.00 | 2.57 |
4801 | 5250 | 6.657541 | GTGTAATACCCCTGTTCAAGAATTCA | 59.342 | 38.462 | 8.44 | 0.00 | 0.00 | 2.57 |
4802 | 5251 | 6.095021 | GGTGTAATACCCCTGTTCAAGAATTC | 59.905 | 42.308 | 0.00 | 0.00 | 44.15 | 2.17 |
4803 | 5252 | 5.949952 | GGTGTAATACCCCTGTTCAAGAATT | 59.050 | 40.000 | 0.00 | 0.00 | 44.15 | 2.17 |
4804 | 5253 | 5.506708 | GGTGTAATACCCCTGTTCAAGAAT | 58.493 | 41.667 | 0.00 | 0.00 | 44.15 | 2.40 |
4805 | 5254 | 4.913784 | GGTGTAATACCCCTGTTCAAGAA | 58.086 | 43.478 | 0.00 | 0.00 | 44.15 | 2.52 |
4806 | 5255 | 4.563140 | GGTGTAATACCCCTGTTCAAGA | 57.437 | 45.455 | 0.00 | 0.00 | 44.15 | 3.02 |
4900 | 5350 | 0.179037 | TCTACGCCCTAGCTCGCTAA | 60.179 | 55.000 | 0.00 | 0.00 | 36.60 | 3.09 |
4925 | 5375 | 1.352156 | CGCGAAGTTCTTTCCCTCCG | 61.352 | 60.000 | 0.00 | 0.00 | 31.82 | 4.63 |
4928 | 5378 | 2.027625 | CGCGCGAAGTTCTTTCCCT | 61.028 | 57.895 | 28.94 | 0.00 | 31.82 | 4.20 |
4977 | 5427 | 0.393448 | TTGTCGGATCACGGGTTTCA | 59.607 | 50.000 | 0.00 | 0.00 | 44.45 | 2.69 |
4979 | 5429 | 1.071071 | TCTTTGTCGGATCACGGGTTT | 59.929 | 47.619 | 0.00 | 0.00 | 44.45 | 3.27 |
5000 | 5450 | 1.133513 | TGGTGGGCATTGAAGTTGTCT | 60.134 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
5118 | 5590 | 0.955428 | CATCTTGACGTGTGTGGGGG | 60.955 | 60.000 | 0.00 | 0.00 | 0.00 | 5.40 |
5119 | 5591 | 0.955428 | CCATCTTGACGTGTGTGGGG | 60.955 | 60.000 | 0.00 | 0.00 | 0.00 | 4.96 |
5120 | 5592 | 0.034756 | TCCATCTTGACGTGTGTGGG | 59.965 | 55.000 | 0.00 | 0.00 | 0.00 | 4.61 |
5121 | 5593 | 2.099141 | ATCCATCTTGACGTGTGTGG | 57.901 | 50.000 | 0.00 | 0.00 | 0.00 | 4.17 |
5122 | 5594 | 2.598637 | CGTATCCATCTTGACGTGTGTG | 59.401 | 50.000 | 0.00 | 0.00 | 0.00 | 3.82 |
5123 | 5595 | 2.230508 | ACGTATCCATCTTGACGTGTGT | 59.769 | 45.455 | 0.00 | 0.00 | 46.05 | 3.72 |
5188 | 5761 | 0.980231 | GAGAGGGGATGCAGGTGACT | 60.980 | 60.000 | 0.00 | 0.00 | 46.44 | 3.41 |
5324 | 5897 | 2.842188 | TAGGTCAAGGGCGCTACCGA | 62.842 | 60.000 | 15.01 | 8.84 | 40.62 | 4.69 |
5336 | 5927 | 2.097110 | ATGGGTCGGCTATAGGTCAA | 57.903 | 50.000 | 1.04 | 0.00 | 0.00 | 3.18 |
5353 | 5944 | 1.399440 | CAGATGCAACCCGAGACAATG | 59.601 | 52.381 | 0.00 | 0.00 | 0.00 | 2.82 |
5409 | 6000 | 3.081061 | TGACATTGCGGTATTTGAGCTT | 58.919 | 40.909 | 0.00 | 0.00 | 0.00 | 3.74 |
5625 | 6217 | 0.251121 | TTGACACACGGCCATGGAAT | 60.251 | 50.000 | 18.40 | 0.00 | 0.00 | 3.01 |
5633 | 6225 | 0.039527 | GAATTGGGTTGACACACGGC | 60.040 | 55.000 | 0.00 | 0.00 | 0.00 | 5.68 |
5639 | 6231 | 2.382882 | TGTTGCAGAATTGGGTTGACA | 58.617 | 42.857 | 0.00 | 0.00 | 0.00 | 3.58 |
5668 | 6260 | 2.643551 | CCCATTAAGATTGAGGCACGT | 58.356 | 47.619 | 0.00 | 0.00 | 0.00 | 4.49 |
5849 | 6472 | 0.392193 | CAACTGCCTTGAGCTCGGAT | 60.392 | 55.000 | 9.64 | 0.00 | 44.23 | 4.18 |
5852 | 6475 | 0.320247 | AGACAACTGCCTTGAGCTCG | 60.320 | 55.000 | 9.64 | 0.00 | 44.23 | 5.03 |
5917 | 6540 | 2.811410 | AGGCATGCTTGAGGAAAATCA | 58.189 | 42.857 | 18.92 | 0.00 | 0.00 | 2.57 |
5958 | 6581 | 6.305693 | AGAACAATTTTGTGAGAGCAGTAC | 57.694 | 37.500 | 0.00 | 0.00 | 41.31 | 2.73 |
5976 | 6599 | 2.703536 | TCAGCCTCCTGTTTGTAGAACA | 59.296 | 45.455 | 0.00 | 0.00 | 40.09 | 3.18 |
6005 | 6628 | 4.586001 | GGGCAATGAAGGATATGTTGATGT | 59.414 | 41.667 | 0.00 | 0.00 | 0.00 | 3.06 |
6102 | 6731 | 3.997021 | GACTCACGACAACATCTTTGGAT | 59.003 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
6103 | 6732 | 3.181470 | TGACTCACGACAACATCTTTGGA | 60.181 | 43.478 | 0.00 | 0.00 | 0.00 | 3.53 |
6139 | 6768 | 3.434940 | AGGAAAGGAATGTACGGCTTT | 57.565 | 42.857 | 0.00 | 0.00 | 0.00 | 3.51 |
6146 | 6775 | 6.041409 | TCAAAATGCACAAGGAAAGGAATGTA | 59.959 | 34.615 | 0.00 | 0.00 | 0.00 | 2.29 |
6221 | 6850 | 0.094216 | CATTGCACGAGCTTCACGAG | 59.906 | 55.000 | 6.36 | 0.00 | 42.74 | 4.18 |
6222 | 6851 | 1.900585 | GCATTGCACGAGCTTCACGA | 61.901 | 55.000 | 6.36 | 0.00 | 42.74 | 4.35 |
6245 | 6874 | 0.037605 | GCCGGCACACTGTACTTACT | 60.038 | 55.000 | 24.80 | 0.00 | 0.00 | 2.24 |
6246 | 6875 | 1.349259 | CGCCGGCACACTGTACTTAC | 61.349 | 60.000 | 28.98 | 0.00 | 0.00 | 2.34 |
6289 | 6918 | 5.180868 | CCTAAGACATGGAATCTAATGCTGC | 59.819 | 44.000 | 0.00 | 0.00 | 0.00 | 5.25 |
6376 | 7005 | 5.946942 | ACCATTGATGATGACTACAGACT | 57.053 | 39.130 | 0.00 | 0.00 | 38.03 | 3.24 |
6406 | 7035 | 4.142403 | CCATTTCGGTAGTGATGCAATTGT | 60.142 | 41.667 | 7.40 | 0.00 | 0.00 | 2.71 |
6458 | 7088 | 6.859112 | ACATACACAACTAGGATGAAGAGT | 57.141 | 37.500 | 4.95 | 1.77 | 0.00 | 3.24 |
6563 | 7194 | 6.082338 | GCAAAGATGTCATCCAAATATAGCG | 58.918 | 40.000 | 9.29 | 0.00 | 0.00 | 4.26 |
6585 | 7216 | 3.950794 | GAGGCCGGTGATTGTCGCA | 62.951 | 63.158 | 1.90 | 0.00 | 0.00 | 5.10 |
6597 | 7228 | 0.537371 | AAAAGTTGAGGGTGAGGCCG | 60.537 | 55.000 | 0.00 | 0.00 | 38.44 | 6.13 |
6617 | 7248 | 1.873591 | GAGGAATGAACGTGCACTTGT | 59.126 | 47.619 | 16.19 | 3.07 | 0.00 | 3.16 |
6650 | 7281 | 4.000988 | GTCCAGTTTTTCGGCAATCTCTA | 58.999 | 43.478 | 0.00 | 0.00 | 0.00 | 2.43 |
6742 | 7373 | 3.102972 | AGGGATCAGGTCGATGATATGG | 58.897 | 50.000 | 1.54 | 0.00 | 40.02 | 2.74 |
6757 | 7389 | 1.312815 | CAAGCGAAATGGGAGGGATC | 58.687 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
6772 | 7404 | 1.602920 | GCAAGCCCTTTGTGTACAAGC | 60.603 | 52.381 | 0.00 | 0.00 | 39.08 | 4.01 |
6785 | 7419 | 1.244019 | CCACACAACCTAGCAAGCCC | 61.244 | 60.000 | 0.00 | 0.00 | 0.00 | 5.19 |
6790 | 7424 | 1.529309 | TGTGCCACACAACCTAGCA | 59.471 | 52.632 | 0.00 | 0.00 | 41.69 | 3.49 |
6822 | 7456 | 3.223435 | TCGACAAAATTACCCTTGCCAA | 58.777 | 40.909 | 0.00 | 0.00 | 0.00 | 4.52 |
6855 | 7489 | 1.342674 | TGGTGTAGGTAGGTAGGGCAG | 60.343 | 57.143 | 0.00 | 0.00 | 0.00 | 4.85 |
7021 | 7658 | 0.178992 | CTTCACCCCACCAGAAAGCA | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 3.91 |
7053 | 7692 | 0.606604 | GTGTAGAGAACGGGGAAGCA | 59.393 | 55.000 | 0.00 | 0.00 | 0.00 | 3.91 |
7055 | 7694 | 0.458025 | GCGTGTAGAGAACGGGGAAG | 60.458 | 60.000 | 0.00 | 0.00 | 41.31 | 3.46 |
7104 | 7743 | 5.415701 | GGTCTTCAATGCACAAAAGGATAGA | 59.584 | 40.000 | 0.00 | 0.00 | 0.00 | 1.98 |
7157 | 7798 | 0.734889 | GGTTGCCAATCTCGATGTGG | 59.265 | 55.000 | 5.09 | 5.09 | 35.39 | 4.17 |
7240 | 7881 | 1.071228 | CCATGAATGAGGCATCGGAGA | 59.929 | 52.381 | 0.00 | 0.00 | 45.75 | 3.71 |
7288 | 7929 | 0.168788 | GGTGTCCACAACATGCATCG | 59.831 | 55.000 | 0.00 | 0.00 | 40.80 | 3.84 |
7405 | 8047 | 6.823182 | AGACATATGCTACAGTGCAAATGTTA | 59.177 | 34.615 | 10.77 | 0.00 | 46.63 | 2.41 |
7475 | 8117 | 0.452987 | CAAATGGCATGGACGTGGAG | 59.547 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
7521 | 8163 | 4.269523 | GGCACACCACCTCCAGCA | 62.270 | 66.667 | 0.00 | 0.00 | 35.26 | 4.41 |
7584 | 8226 | 0.833287 | GAGGATGGCAAGGCAGACTA | 59.167 | 55.000 | 2.05 | 0.00 | 0.00 | 2.59 |
7805 | 8447 | 3.256631 | AGTTTTAGGCCATTGACAAGCAG | 59.743 | 43.478 | 5.01 | 0.00 | 0.00 | 4.24 |
8094 | 8740 | 3.202829 | TCAAGGGTCTGGTGTTGTAAC | 57.797 | 47.619 | 0.00 | 0.00 | 0.00 | 2.50 |
8121 | 8767 | 1.274728 | CTGACCAGTGACCTCCTGAAG | 59.725 | 57.143 | 0.00 | 0.00 | 31.38 | 3.02 |
8150 | 8796 | 4.513692 | GCACTGTATTGTAAGGTCACAACA | 59.486 | 41.667 | 0.00 | 0.00 | 41.02 | 3.33 |
8277 | 8924 | 0.534877 | TTGCCACGAATGAGCAGTGT | 60.535 | 50.000 | 0.00 | 0.00 | 34.71 | 3.55 |
8313 | 8960 | 5.665812 | ACTAGGATATTCCCAAACTGTGCTA | 59.334 | 40.000 | 0.00 | 0.00 | 37.19 | 3.49 |
8317 | 8964 | 7.178451 | CCAAAAACTAGGATATTCCCAAACTGT | 59.822 | 37.037 | 0.00 | 0.00 | 37.19 | 3.55 |
8361 | 9008 | 4.543590 | AGAAGTAGAATGGGTGTGTCAG | 57.456 | 45.455 | 0.00 | 0.00 | 0.00 | 3.51 |
8431 | 9078 | 0.755686 | GCCTCCTCCTTGACGATGAT | 59.244 | 55.000 | 0.00 | 0.00 | 0.00 | 2.45 |
8434 | 9081 | 2.390225 | ATAGCCTCCTCCTTGACGAT | 57.610 | 50.000 | 0.00 | 0.00 | 0.00 | 3.73 |
8631 | 9297 | 3.073678 | TCGCTTGTTATGTTGATGCAGT | 58.926 | 40.909 | 0.00 | 0.00 | 0.00 | 4.40 |
8679 | 9345 | 4.576463 | AGCCAATGGATGAATCGAACTTAC | 59.424 | 41.667 | 2.05 | 0.00 | 0.00 | 2.34 |
9148 | 9829 | 2.650322 | TGTTTGTAAGGGCCTAATGGGA | 59.350 | 45.455 | 6.41 | 0.00 | 37.23 | 4.37 |
9245 | 9933 | 4.447908 | CCCCTACTGCTAGGAATAGAGTGA | 60.448 | 50.000 | 0.82 | 0.00 | 42.34 | 3.41 |
9350 | 10040 | 5.817296 | TCGTCTAGGAAATGATTTGTCATGG | 59.183 | 40.000 | 0.00 | 0.00 | 0.00 | 3.66 |
9360 | 10050 | 3.489229 | CGTGCTCATCGTCTAGGAAATGA | 60.489 | 47.826 | 0.00 | 0.00 | 0.00 | 2.57 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.