Multiple sequence alignment - TraesCS6A01G011700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G011700 chr6A 100.000 7617 0 0 747 8363 5357991 5365607 0.000000e+00 14067
1 TraesCS6A01G011700 chr6A 100.000 417 0 0 1 417 5357245 5357661 0.000000e+00 771
2 TraesCS6A01G011700 chr6A 85.496 131 17 2 1126 1255 148248598 148248727 1.460000e-27 135
3 TraesCS6A01G011700 chr6D 92.362 3129 146 30 4485 7572 6017146 6020222 0.000000e+00 4368
4 TraesCS6A01G011700 chr6D 92.349 941 48 7 2334 3262 6014625 6015553 0.000000e+00 1317
5 TraesCS6A01G011700 chr6D 88.631 862 48 27 747 1590 6012691 6013520 0.000000e+00 1003
6 TraesCS6A01G011700 chr6D 88.124 741 67 12 3590 4323 6016247 6016973 0.000000e+00 861
7 TraesCS6A01G011700 chr6D 93.285 417 17 6 1924 2333 6014176 6014588 9.280000e-169 604
8 TraesCS6A01G011700 chr6D 86.525 423 40 10 1 417 6012195 6012606 4.600000e-122 449
9 TraesCS6A01G011700 chr6D 90.286 350 22 8 7985 8325 6020553 6020899 1.660000e-121 448
10 TraesCS6A01G011700 chr6D 90.625 320 15 11 1619 1925 6013712 6014029 2.170000e-110 411
11 TraesCS6A01G011700 chr6D 89.216 306 18 7 7572 7877 6020259 6020549 1.330000e-97 368
12 TraesCS6A01G011700 chr6D 85.496 131 17 2 1126 1255 119995585 119995714 1.460000e-27 135
13 TraesCS6A01G011700 chr6B 93.014 2319 116 20 5276 7572 11319820 11317526 0.000000e+00 3343
14 TraesCS6A01G011700 chr6B 89.557 1331 79 30 1952 3254 11324846 11323548 0.000000e+00 1633
15 TraesCS6A01G011700 chr6B 87.653 899 95 11 3429 4323 11323147 11322261 0.000000e+00 1031
16 TraesCS6A01G011700 chr6B 92.857 532 20 11 772 1302 11326083 11325569 0.000000e+00 756
17 TraesCS6A01G011700 chr6B 91.963 535 29 7 4721 5248 11320566 11320039 0.000000e+00 737
18 TraesCS6A01G011700 chr6B 84.628 631 44 15 7720 8325 11317234 11316632 5.630000e-161 579
19 TraesCS6A01G011700 chr6B 82.253 586 57 29 1377 1925 11325542 11324967 5.910000e-126 462
20 TraesCS6A01G011700 chr6B 85.373 335 31 12 1 319 11326673 11326341 1.740000e-86 331
21 TraesCS6A01G011700 chr6B 88.148 270 23 4 4463 4725 11322143 11321876 6.300000e-81 313
22 TraesCS6A01G011700 chr6B 95.620 137 4 2 4331 4465 716890334 716890470 1.410000e-52 219
23 TraesCS6A01G011700 chr6B 93.269 104 7 0 7575 7678 11317494 11317391 4.040000e-33 154
24 TraesCS6A01G011700 chr6B 87.603 121 15 0 1135 1255 212970157 212970037 3.150000e-29 141
25 TraesCS6A01G011700 chr2D 78.555 429 78 9 3844 4267 500361067 500361486 3.850000e-68 270
26 TraesCS6A01G011700 chr2D 92.414 145 9 1 4338 4480 645613051 645613195 1.100000e-48 206
27 TraesCS6A01G011700 chr7D 81.437 334 54 6 3844 4175 386763094 386762767 4.980000e-67 267
28 TraesCS6A01G011700 chr5D 81.288 326 56 3 3847 4171 42067967 42067646 8.330000e-65 259
29 TraesCS6A01G011700 chr5D 91.667 156 12 1 4326 4481 179777679 179777525 1.830000e-51 215
30 TraesCS6A01G011700 chr3B 77.934 426 86 4 3840 4265 804145374 804144957 8.330000e-65 259
31 TraesCS6A01G011700 chr3B 96.992 133 3 1 4335 4467 527239519 527239388 1.090000e-53 222
32 TraesCS6A01G011700 chr1A 80.982 326 57 3 3841 4166 23335297 23335617 3.870000e-63 254
33 TraesCS6A01G011700 chr1A 96.923 130 4 0 4336 4465 552145796 552145925 1.410000e-52 219
34 TraesCS6A01G011700 chr4D 77.327 419 90 4 3847 4265 362801454 362801041 8.390000e-60 243
35 TraesCS6A01G011700 chr4D 75.565 487 102 14 3844 4323 336835274 336834798 3.040000e-54 224
36 TraesCS6A01G011700 chr4D 77.037 405 79 10 3874 4273 13309694 13309299 3.930000e-53 220
37 TraesCS6A01G011700 chr4D 86.792 159 20 1 1124 1282 498384569 498384726 8.630000e-40 176
38 TraesCS6A01G011700 chr7A 76.923 403 82 9 3874 4273 694020694 694020300 1.410000e-52 219
39 TraesCS6A01G011700 chr2B 96.212 132 5 0 4334 4465 794689067 794688936 5.080000e-52 217
40 TraesCS6A01G011700 chr2B 96.212 132 5 0 4334 4465 794797968 794797837 5.080000e-52 217
41 TraesCS6A01G011700 chr3D 91.667 156 9 4 4334 4488 581870712 581870560 6.580000e-51 213
42 TraesCS6A01G011700 chr5A 94.815 135 7 0 4331 4465 9840821 9840955 2.360000e-50 211
43 TraesCS6A01G011700 chr5A 87.421 159 19 1 1124 1282 678932049 678932206 1.850000e-41 182
44 TraesCS6A01G011700 chr4B 75.231 432 97 8 3845 4273 532725302 532724878 6.620000e-46 196
45 TraesCS6A01G011700 chr4B 88.816 152 16 1 1124 1275 640290077 640290227 1.430000e-42 185
46 TraesCS6A01G011700 chr4B 85.612 139 20 0 1135 1273 648096831 648096969 6.760000e-31 147


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G011700 chr6A 5357245 5365607 8362 False 7419.000000 14067 100.000000 1 8363 2 chr6A.!!$F2 8362
1 TraesCS6A01G011700 chr6D 6012195 6020899 8704 False 1092.111111 4368 90.155889 1 8325 9 chr6D.!!$F2 8324
2 TraesCS6A01G011700 chr6B 11316632 11326673 10041 True 933.900000 3343 88.871500 1 8325 10 chr6B.!!$R2 8324

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
978 1050 0.324738 TGTGCTCCTCCGAGATCCTT 60.325 55.0 0.00 0.00 38.52 3.36 F
1973 2415 0.112995 TGATCCTGGCCTGCTTTTGT 59.887 50.0 3.32 0.00 0.00 2.83 F
2209 2653 0.250467 ACTTGCATCTGCGGACTGTT 60.250 50.0 0.00 0.00 45.83 3.16 F
3287 3793 0.110486 AGTTGCAGTTTGGGTCGGAT 59.890 50.0 0.00 0.00 0.00 4.18 F
3700 4610 0.179200 GACAATTGCAGGCCGTAACG 60.179 55.0 5.05 0.00 0.00 3.18 F
4504 5419 0.031178 CACAAAGACAACTGGGCAGC 59.969 55.0 0.00 0.00 0.00 5.25 F
4505 5420 0.106519 ACAAAGACAACTGGGCAGCT 60.107 50.0 0.00 0.00 0.00 4.24 F
4622 5572 0.180406 ATGACGGAATACTGCCCCAC 59.820 55.0 0.00 0.00 0.00 4.61 F
5252 7533 0.185175 ACCACAAAGTTCAGTCCCCC 59.815 55.0 0.00 0.00 0.00 5.40 F
6990 9475 0.249073 GGTATGCGTCGACATCTGCT 60.249 55.0 17.16 3.81 0.00 4.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2030 2472 0.031178 AGTCCGTTCGTACCACACAC 59.969 55.000 0.00 0.0 0.00 3.82 R
3268 3774 0.110486 ATCCGACCCAAACTGCAACT 59.890 50.000 0.00 0.0 0.00 3.16 R
3409 4230 0.324943 ATGTCTAGTGGCGGTGCTTT 59.675 50.000 0.00 0.0 0.00 3.51 R
4447 5362 0.038744 AGTACTCCCTCCGTCCGAAA 59.961 55.000 0.00 0.0 0.00 3.46 R
4576 5526 0.689623 AAGAGGAGAAGTGGTGGCTG 59.310 55.000 0.00 0.0 0.00 4.85 R
6477 8955 1.369839 GCTTCAAGGCCGTAGCTTCC 61.370 60.000 6.23 0.0 39.73 3.46 R
6532 9010 0.533531 CAGCAGGCAAGTCACTGTCA 60.534 55.000 0.00 0.0 37.07 3.58 R
6536 9014 1.072806 TGATTCAGCAGGCAAGTCACT 59.927 47.619 0.00 0.0 0.00 3.41 R
7198 9687 1.376037 GCAGCGCCTTGTACTCCTT 60.376 57.895 2.29 0.0 0.00 3.36 R
7952 10643 0.385390 CTGCAAAAAGGGAACACGCT 59.615 50.000 0.00 0.0 0.00 5.07 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 8.871686 AAAAGCAGAAAAATGAGTAATTCGTT 57.128 26.923 0.00 0.00 36.58 3.85
32 33 7.858052 AAGCAGAAAAATGAGTAATTCGTTG 57.142 32.000 0.00 0.00 35.23 4.10
33 34 5.858581 AGCAGAAAAATGAGTAATTCGTTGC 59.141 36.000 0.00 0.00 35.23 4.17
175 182 2.799371 CCTCTACGGTCGTCTGCC 59.201 66.667 0.00 0.00 0.00 4.85
210 221 4.261656 CCACCGACTTTTATATCGCTCTCT 60.262 45.833 0.00 0.00 37.01 3.10
213 224 4.216687 CCGACTTTTATATCGCTCTCTCCT 59.783 45.833 0.00 0.00 37.01 3.69
249 260 2.203252 CCCATCGGCCATGTCAGG 60.203 66.667 2.24 0.00 0.00 3.86
263 279 2.809446 TGTCAGGCATCGATTAAGACG 58.191 47.619 0.00 0.00 0.00 4.18
275 291 6.698008 TCGATTAAGACGATAACCTAACCA 57.302 37.500 0.00 0.00 34.85 3.67
292 308 5.071923 CCTAACCAGACCTCCCCTAAATAAG 59.928 48.000 0.00 0.00 0.00 1.73
294 310 2.777692 CCAGACCTCCCCTAAATAAGCA 59.222 50.000 0.00 0.00 0.00 3.91
300 316 5.837829 ACCTCCCCTAAATAAGCAAAATCA 58.162 37.500 0.00 0.00 0.00 2.57
393 461 5.259832 ACTACGGATTAAGCAAGTCCTAC 57.740 43.478 0.00 0.00 0.00 3.18
869 941 6.944234 ACCTTTCCTTTCTGAGTAACAAAG 57.056 37.500 0.00 0.00 0.00 2.77
938 1010 1.771255 CCCTCCCTCCACCAGATTAAG 59.229 57.143 0.00 0.00 0.00 1.85
939 1011 1.141858 CCTCCCTCCACCAGATTAAGC 59.858 57.143 0.00 0.00 0.00 3.09
940 1012 1.141858 CTCCCTCCACCAGATTAAGCC 59.858 57.143 0.00 0.00 0.00 4.35
941 1013 1.216990 CCCTCCACCAGATTAAGCCT 58.783 55.000 0.00 0.00 0.00 4.58
942 1014 1.133976 CCCTCCACCAGATTAAGCCTG 60.134 57.143 0.00 0.00 0.00 4.85
972 1044 4.504916 CCGCTGTGCTCCTCCGAG 62.505 72.222 0.00 0.00 39.33 4.63
973 1045 3.443925 CGCTGTGCTCCTCCGAGA 61.444 66.667 0.00 0.00 38.52 4.04
974 1046 2.780094 CGCTGTGCTCCTCCGAGAT 61.780 63.158 0.00 0.00 38.52 2.75
978 1050 0.324738 TGTGCTCCTCCGAGATCCTT 60.325 55.000 0.00 0.00 38.52 3.36
981 1053 0.469144 GCTCCTCCGAGATCCTTCCT 60.469 60.000 0.00 0.00 38.52 3.36
982 1054 1.202952 GCTCCTCCGAGATCCTTCCTA 60.203 57.143 0.00 0.00 38.52 2.94
983 1055 2.790433 CTCCTCCGAGATCCTTCCTAG 58.210 57.143 0.00 0.00 38.52 3.02
1063 1147 3.928966 GACGAGCAGCAGCAGCAGA 62.929 63.158 12.92 0.00 45.49 4.26
1064 1148 2.511829 CGAGCAGCAGCAGCAGAT 60.512 61.111 12.92 0.00 45.49 2.90
1065 1149 2.526993 CGAGCAGCAGCAGCAGATC 61.527 63.158 12.92 2.28 45.49 2.75
1066 1150 2.511829 AGCAGCAGCAGCAGATCG 60.512 61.111 12.92 0.00 45.49 3.69
1068 1152 3.090656 CAGCAGCAGCAGATCGTG 58.909 61.111 3.17 0.00 45.49 4.35
1069 1153 2.125229 AGCAGCAGCAGATCGTGG 60.125 61.111 3.17 0.00 45.49 4.94
1070 1154 2.435586 GCAGCAGCAGATCGTGGT 60.436 61.111 0.00 0.00 41.58 4.16
1305 1392 2.697761 GCCAGAGTACGTCCGCTCA 61.698 63.158 14.36 0.00 34.39 4.26
1308 1395 2.045131 AGAGTACGTCCGCTCACCC 61.045 63.158 14.36 0.00 34.39 4.61
1309 1396 3.392595 GAGTACGTCCGCTCACCCG 62.393 68.421 0.00 0.00 0.00 5.28
1340 1427 4.964241 GCCCTAGATCGGCCCCCT 62.964 72.222 0.00 0.00 40.78 4.79
1342 1429 1.770518 CCCTAGATCGGCCCCCTTT 60.771 63.158 0.00 0.00 0.00 3.11
1343 1430 1.755384 CCTAGATCGGCCCCCTTTC 59.245 63.158 0.00 0.00 0.00 2.62
1373 1460 1.209127 CCGCTTGATTTCCGCGTTT 59.791 52.632 4.92 0.00 44.92 3.60
1446 1538 3.921630 CCGTACACATGAAATACACACGA 59.078 43.478 0.00 0.00 0.00 4.35
1448 1540 4.619760 CGTACACATGAAATACACACGAGT 59.380 41.667 0.00 0.00 0.00 4.18
1449 1541 5.118050 CGTACACATGAAATACACACGAGTT 59.882 40.000 0.00 0.00 0.00 3.01
1456 1548 3.746045 AATACACACGAGTTCCACTGT 57.254 42.857 0.00 0.00 0.00 3.55
1462 1558 1.338337 CACGAGTTCCACTGTCACTCT 59.662 52.381 0.00 0.00 35.70 3.24
1463 1559 1.609555 ACGAGTTCCACTGTCACTCTC 59.390 52.381 0.00 0.00 35.70 3.20
1466 1562 3.153919 GAGTTCCACTGTCACTCTCTCT 58.846 50.000 4.72 0.00 35.10 3.10
1470 1566 2.642311 TCCACTGTCACTCTCTCTCTCT 59.358 50.000 0.00 0.00 0.00 3.10
1471 1567 3.009723 CCACTGTCACTCTCTCTCTCTC 58.990 54.545 0.00 0.00 0.00 3.20
1472 1568 3.558958 CCACTGTCACTCTCTCTCTCTCA 60.559 52.174 0.00 0.00 0.00 3.27
1473 1569 3.686241 CACTGTCACTCTCTCTCTCTCAG 59.314 52.174 0.00 0.00 0.00 3.35
1474 1570 3.273434 CTGTCACTCTCTCTCTCTCAGG 58.727 54.545 0.00 0.00 0.00 3.86
1475 1571 2.909662 TGTCACTCTCTCTCTCTCAGGA 59.090 50.000 0.00 0.00 0.00 3.86
1476 1572 3.329225 TGTCACTCTCTCTCTCTCAGGAA 59.671 47.826 0.00 0.00 0.00 3.36
1480 1576 5.418524 TCACTCTCTCTCTCTCAGGAATTTG 59.581 44.000 0.00 0.00 0.00 2.32
1481 1577 4.711355 ACTCTCTCTCTCTCAGGAATTTGG 59.289 45.833 0.00 0.00 0.00 3.28
1484 1580 4.420206 TCTCTCTCTCAGGAATTTGGTGA 58.580 43.478 0.00 0.00 0.00 4.02
1485 1581 4.465660 TCTCTCTCTCAGGAATTTGGTGAG 59.534 45.833 6.39 6.39 39.31 3.51
1486 1582 4.420206 TCTCTCTCAGGAATTTGGTGAGA 58.580 43.478 12.30 12.30 43.49 3.27
1490 1588 7.180946 TCTCTCTCAGGAATTTGGTGAGATTTA 59.819 37.037 12.96 5.00 44.38 1.40
1492 1590 8.331740 TCTCTCAGGAATTTGGTGAGATTTATT 58.668 33.333 12.96 0.00 44.38 1.40
1503 1601 6.106673 TGGTGAGATTTATTCCTTCGAGTTC 58.893 40.000 0.00 0.00 0.00 3.01
1522 1620 2.661594 TCGATCGTTTAGATGGATGCG 58.338 47.619 15.94 0.00 38.83 4.73
1568 1669 9.661563 ATCTTGTCGATAATTAAACCACTGTTA 57.338 29.630 0.00 0.00 33.30 2.41
1580 1681 2.433239 ACCACTGTTATAGGGTTAGGCG 59.567 50.000 0.00 0.00 29.02 5.52
1583 1684 2.963782 ACTGTTATAGGGTTAGGCGAGG 59.036 50.000 0.00 0.00 0.00 4.63
1587 1688 4.470664 TGTTATAGGGTTAGGCGAGGAAAA 59.529 41.667 0.00 0.00 0.00 2.29
1611 1712 8.432110 AAAACCAGGAAATAATTTTGACACAC 57.568 30.769 0.00 0.00 0.00 3.82
1613 1714 5.838521 ACCAGGAAATAATTTTGACACACCT 59.161 36.000 0.00 0.00 0.00 4.00
1714 1990 1.850377 CGCATTGTTTGTTTGCTGGA 58.150 45.000 0.00 0.00 34.23 3.86
1727 2003 2.325583 TGCTGGAAAAAGTCACTCGT 57.674 45.000 0.00 0.00 0.00 4.18
1775 2055 8.980481 TGATTTTCTTCCCAATCTAGTAATCC 57.020 34.615 0.00 0.00 31.64 3.01
1828 2111 4.934797 TGGGGAAATCTTGAGAAGTCAT 57.065 40.909 0.00 0.00 30.85 3.06
1866 2149 2.780065 TGTGAGCACATCAAACAAGC 57.220 45.000 0.00 0.00 40.43 4.01
1870 2153 2.033675 TGAGCACATCAAACAAGCACTG 59.966 45.455 0.00 0.00 34.02 3.66
1882 2170 2.238144 ACAAGCACTGCATCATAGGACT 59.762 45.455 3.30 0.00 0.00 3.85
1920 2208 7.610865 TCTTAGCACAAAATAATTTCCCCTTG 58.389 34.615 0.00 0.00 0.00 3.61
1926 2362 9.394767 GCACAAAATAATTTCCCCTTGATTATT 57.605 29.630 0.00 0.00 37.48 1.40
1934 2370 6.933514 TTTCCCCTTGATTATTTTCTTGCT 57.066 33.333 0.00 0.00 0.00 3.91
1935 2371 5.920193 TCCCCTTGATTATTTTCTTGCTG 57.080 39.130 0.00 0.00 0.00 4.41
1950 2386 0.692476 TGCTGGCAGTGGAGTAACAT 59.308 50.000 17.16 0.00 0.00 2.71
1973 2415 0.112995 TGATCCTGGCCTGCTTTTGT 59.887 50.000 3.32 0.00 0.00 2.83
2030 2472 0.734889 CGCCCATGAGTTAAGCTTGG 59.265 55.000 9.86 0.00 0.00 3.61
2052 2496 3.126858 GTGTGTGGTACGAACGGACTATA 59.873 47.826 9.41 0.00 0.00 1.31
2053 2497 3.947196 TGTGTGGTACGAACGGACTATAT 59.053 43.478 9.41 0.00 0.00 0.86
2075 2519 1.446907 ATCTTGAACTGGCTGCTTCG 58.553 50.000 0.00 0.00 0.00 3.79
2093 2537 7.624134 GCTGCTTCGCTTTAATGCACATATATA 60.624 37.037 13.17 0.00 0.00 0.86
2118 2562 2.870372 GCCTGTACTTTGCCTGCG 59.130 61.111 0.00 0.00 0.00 5.18
2157 2601 1.621107 CGAGATGCAAATGTGTTGCC 58.379 50.000 8.47 0.00 44.32 4.52
2166 2610 1.518056 AATGTGTTGCCGCTGACAGG 61.518 55.000 4.26 0.00 0.00 4.00
2209 2653 0.250467 ACTTGCATCTGCGGACTGTT 60.250 50.000 0.00 0.00 45.83 3.16
2225 2673 5.451520 CGGACTGTTCCCCATACTTTACTAG 60.452 48.000 0.00 0.00 38.99 2.57
2312 2760 2.174685 TAGCAGCTGTGGGGAATCTA 57.825 50.000 16.64 2.42 0.00 1.98
2316 2764 2.114616 CAGCTGTGGGGAATCTACTCT 58.885 52.381 5.25 0.00 0.00 3.24
2318 2766 1.834263 GCTGTGGGGAATCTACTCTGT 59.166 52.381 0.00 0.00 0.00 3.41
2377 2861 3.446873 GTGTGGAATGAATGGCCAACATA 59.553 43.478 22.93 10.00 39.40 2.29
2379 2863 4.341806 TGTGGAATGAATGGCCAACATATC 59.658 41.667 22.93 20.26 39.40 1.63
2467 2961 5.633830 ACATTGCGAGACTGATTTTGATT 57.366 34.783 0.00 0.00 0.00 2.57
2476 2970 6.401903 CGAGACTGATTTTGATTGGAACTGAG 60.402 42.308 0.00 0.00 0.00 3.35
2530 3024 1.761449 ATTGTCGTGCATATGGCCAA 58.239 45.000 10.96 0.00 43.89 4.52
2565 3060 6.093909 CCAGTGACATGTGCATCTTATTGTTA 59.906 38.462 1.15 0.00 0.00 2.41
2595 3090 8.149647 TGGCAGTTCATTTGATATGTTTTTCTT 58.850 29.630 0.00 0.00 0.00 2.52
2616 3111 3.988819 TCTTAAAATGCAACAAGGTGCC 58.011 40.909 7.74 0.00 44.26 5.01
2622 3118 1.484038 TGCAACAAGGTGCCTTTTCT 58.516 45.000 7.74 0.00 44.26 2.52
2626 3122 3.309682 GCAACAAGGTGCCTTTTCTTTTC 59.690 43.478 0.00 0.00 38.66 2.29
2651 3147 7.069455 TCGATAGAACTCTCCATGTTAAATCCA 59.931 37.037 0.00 0.00 46.15 3.41
2654 3150 6.410540 AGAACTCTCCATGTTAAATCCACTC 58.589 40.000 0.00 0.00 0.00 3.51
2702 3198 6.472887 TGAAGGCTACTGTTGCTAAAGTAAT 58.527 36.000 13.54 0.00 0.00 1.89
2707 3203 6.183360 GGCTACTGTTGCTAAAGTAATGTCAG 60.183 42.308 13.54 0.00 0.00 3.51
3068 3568 2.876091 TCACGTAGTTGCTCTACATGC 58.124 47.619 15.76 0.00 46.66 4.06
3212 3718 3.107601 TGCTTACCTCCTACTTGCATCT 58.892 45.455 0.00 0.00 0.00 2.90
3231 3737 8.195165 TGCATCTAGTAGGCAAATATCTAACT 57.805 34.615 0.00 0.00 43.03 2.24
3242 3748 6.211384 GGCAAATATCTAACTAATTGGCCCAT 59.789 38.462 0.00 0.00 41.86 4.00
3256 3762 1.840635 GGCCCATTCAGTAGTTCTCCT 59.159 52.381 0.00 0.00 0.00 3.69
3262 3768 4.340950 CCATTCAGTAGTTCTCCTCTCTCC 59.659 50.000 0.00 0.00 0.00 3.71
3263 3769 3.655615 TCAGTAGTTCTCCTCTCTCCC 57.344 52.381 0.00 0.00 0.00 4.30
3264 3770 2.242708 TCAGTAGTTCTCCTCTCTCCCC 59.757 54.545 0.00 0.00 0.00 4.81
3265 3771 2.024846 CAGTAGTTCTCCTCTCTCCCCA 60.025 54.545 0.00 0.00 0.00 4.96
3266 3772 2.655407 AGTAGTTCTCCTCTCTCCCCAA 59.345 50.000 0.00 0.00 0.00 4.12
3267 3773 2.959421 AGTTCTCCTCTCTCCCCAAT 57.041 50.000 0.00 0.00 0.00 3.16
3268 3774 4.482772 AGTAGTTCTCCTCTCTCCCCAATA 59.517 45.833 0.00 0.00 0.00 1.90
3269 3775 3.922375 AGTTCTCCTCTCTCCCCAATAG 58.078 50.000 0.00 0.00 0.00 1.73
3270 3776 3.273618 AGTTCTCCTCTCTCCCCAATAGT 59.726 47.826 0.00 0.00 0.00 2.12
3271 3777 4.034410 GTTCTCCTCTCTCCCCAATAGTT 58.966 47.826 0.00 0.00 0.00 2.24
3272 3778 3.647636 TCTCCTCTCTCCCCAATAGTTG 58.352 50.000 0.00 0.00 0.00 3.16
3273 3779 2.103941 CTCCTCTCTCCCCAATAGTTGC 59.896 54.545 0.00 0.00 0.00 4.17
3274 3780 1.839994 CCTCTCTCCCCAATAGTTGCA 59.160 52.381 0.00 0.00 0.00 4.08
3275 3781 2.158842 CCTCTCTCCCCAATAGTTGCAG 60.159 54.545 0.00 0.00 0.00 4.41
3276 3782 2.503356 CTCTCTCCCCAATAGTTGCAGT 59.497 50.000 0.00 0.00 0.00 4.40
3277 3783 2.912956 TCTCTCCCCAATAGTTGCAGTT 59.087 45.455 0.00 0.00 0.00 3.16
3278 3784 3.330701 TCTCTCCCCAATAGTTGCAGTTT 59.669 43.478 0.00 0.00 0.00 2.66
3279 3785 3.420893 TCTCCCCAATAGTTGCAGTTTG 58.579 45.455 0.00 0.00 0.00 2.93
3280 3786 2.493278 CTCCCCAATAGTTGCAGTTTGG 59.507 50.000 10.43 10.43 38.66 3.28
3283 3789 3.575965 CCAATAGTTGCAGTTTGGGTC 57.424 47.619 9.81 0.00 35.93 4.46
3284 3790 2.095263 CCAATAGTTGCAGTTTGGGTCG 60.095 50.000 9.81 0.00 35.93 4.79
3285 3791 1.821216 ATAGTTGCAGTTTGGGTCGG 58.179 50.000 0.00 0.00 0.00 4.79
3286 3792 0.759959 TAGTTGCAGTTTGGGTCGGA 59.240 50.000 0.00 0.00 0.00 4.55
3287 3793 0.110486 AGTTGCAGTTTGGGTCGGAT 59.890 50.000 0.00 0.00 0.00 4.18
3288 3794 0.958822 GTTGCAGTTTGGGTCGGATT 59.041 50.000 0.00 0.00 0.00 3.01
3289 3795 1.068541 GTTGCAGTTTGGGTCGGATTC 60.069 52.381 0.00 0.00 0.00 2.52
3290 3796 0.400213 TGCAGTTTGGGTCGGATTCT 59.600 50.000 0.00 0.00 0.00 2.40
3291 3797 1.087501 GCAGTTTGGGTCGGATTCTC 58.912 55.000 0.00 0.00 0.00 2.87
3292 3798 1.339151 GCAGTTTGGGTCGGATTCTCT 60.339 52.381 0.00 0.00 0.00 3.10
3293 3799 2.622436 CAGTTTGGGTCGGATTCTCTC 58.378 52.381 0.00 0.00 0.00 3.20
3294 3800 1.555533 AGTTTGGGTCGGATTCTCTCC 59.444 52.381 0.00 0.00 41.07 3.71
3305 3811 4.451629 GGATTCTCTCCGTGTGTAGAAA 57.548 45.455 0.00 0.00 33.29 2.52
3306 3812 4.817517 GGATTCTCTCCGTGTGTAGAAAA 58.182 43.478 0.00 0.00 33.29 2.29
3307 3813 5.420409 GGATTCTCTCCGTGTGTAGAAAAT 58.580 41.667 0.00 0.00 33.29 1.82
3308 3814 5.875359 GGATTCTCTCCGTGTGTAGAAAATT 59.125 40.000 0.00 0.00 33.29 1.82
3309 3815 6.036191 GGATTCTCTCCGTGTGTAGAAAATTC 59.964 42.308 0.00 0.00 33.29 2.17
3310 3816 5.462530 TCTCTCCGTGTGTAGAAAATTCA 57.537 39.130 0.00 0.00 0.00 2.57
3311 3817 5.227908 TCTCTCCGTGTGTAGAAAATTCAC 58.772 41.667 0.00 0.00 0.00 3.18
3312 3818 5.010719 TCTCTCCGTGTGTAGAAAATTCACT 59.989 40.000 0.00 0.00 33.82 3.41
3313 3819 5.227908 TCTCCGTGTGTAGAAAATTCACTC 58.772 41.667 0.00 0.00 33.82 3.51
3314 3820 5.010719 TCTCCGTGTGTAGAAAATTCACTCT 59.989 40.000 0.00 0.00 33.82 3.24
3315 3821 6.208007 TCTCCGTGTGTAGAAAATTCACTCTA 59.792 38.462 0.00 0.00 33.82 2.43
3316 3822 6.387465 TCCGTGTGTAGAAAATTCACTCTAG 58.613 40.000 0.00 0.00 33.82 2.43
3317 3823 5.577164 CCGTGTGTAGAAAATTCACTCTAGG 59.423 44.000 0.00 0.00 33.82 3.02
3318 3824 5.062308 CGTGTGTAGAAAATTCACTCTAGGC 59.938 44.000 0.00 0.00 33.82 3.93
3319 3825 5.351740 GTGTGTAGAAAATTCACTCTAGGCC 59.648 44.000 0.00 0.00 33.82 5.19
3320 3826 5.012664 TGTGTAGAAAATTCACTCTAGGCCA 59.987 40.000 5.01 0.00 33.82 5.36
3321 3827 5.938125 GTGTAGAAAATTCACTCTAGGCCAA 59.062 40.000 5.01 0.00 0.00 4.52
3332 4153 3.013921 CTCTAGGCCAATTTTAACCGCA 58.986 45.455 5.01 0.00 0.00 5.69
3351 4172 3.928992 CGCACATATGGGCTGAATACTAG 59.071 47.826 26.67 4.89 43.67 2.57
3364 4185 6.893005 GGCTGAATACTAGAGGATATACACCT 59.107 42.308 0.00 0.56 40.80 4.00
3384 4205 4.794067 ACCTATTTTCTTATGGACTGGGGT 59.206 41.667 0.00 0.00 0.00 4.95
3408 4229 2.936032 GACCAGGTTGGCCCCTCT 60.936 66.667 0.00 0.00 42.67 3.69
3409 4230 1.615424 GACCAGGTTGGCCCCTCTA 60.615 63.158 0.00 0.00 42.67 2.43
3432 4264 1.536284 GCACCGCCACTAGACATAGAC 60.536 57.143 0.00 0.00 32.93 2.59
3443 4275 6.128090 CCACTAGACATAGACTCGTGTTGTAA 60.128 42.308 0.00 0.00 31.93 2.41
3444 4276 7.415318 CCACTAGACATAGACTCGTGTTGTAAT 60.415 40.741 0.00 0.00 31.93 1.89
3469 4301 3.770933 TGTAGGGGCTTGACGTATTACTT 59.229 43.478 0.00 0.00 0.00 2.24
3472 4304 3.518303 AGGGGCTTGACGTATTACTTCTT 59.482 43.478 0.00 0.00 0.00 2.52
3473 4305 4.713321 AGGGGCTTGACGTATTACTTCTTA 59.287 41.667 0.00 0.00 0.00 2.10
3474 4306 4.807834 GGGGCTTGACGTATTACTTCTTAC 59.192 45.833 0.00 0.00 0.00 2.34
3475 4307 5.413499 GGGCTTGACGTATTACTTCTTACA 58.587 41.667 0.00 0.00 0.00 2.41
3511 4417 2.771943 TCGCTCTAATCCTCCCACAAAT 59.228 45.455 0.00 0.00 0.00 2.32
3520 4426 1.365699 CTCCCACAAATTACCGACCG 58.634 55.000 0.00 0.00 0.00 4.79
3536 4442 2.096614 CGACCGTGTGACAATTTGGTAC 60.097 50.000 0.78 0.37 0.00 3.34
3568 4476 2.922955 TCCCCCACAATTTCTACCATCA 59.077 45.455 0.00 0.00 0.00 3.07
3577 4485 7.153985 CACAATTTCTACCATCACCAACAAAT 58.846 34.615 0.00 0.00 0.00 2.32
3579 4487 4.782019 TTCTACCATCACCAACAAATGC 57.218 40.909 0.00 0.00 0.00 3.56
3581 4489 4.148079 TCTACCATCACCAACAAATGCAA 58.852 39.130 0.00 0.00 0.00 4.08
3587 4495 6.154192 ACCATCACCAACAAATGCAATACATA 59.846 34.615 0.00 0.00 38.34 2.29
3595 4504 9.941664 CCAACAAATGCAATACATAAACAAAAA 57.058 25.926 0.00 0.00 38.34 1.94
3700 4610 0.179200 GACAATTGCAGGCCGTAACG 60.179 55.000 5.05 0.00 0.00 3.18
3726 4636 2.271800 CACATAACGCTCTCTCAACCC 58.728 52.381 0.00 0.00 0.00 4.11
3728 4638 0.460311 ATAACGCTCTCTCAACCCCG 59.540 55.000 0.00 0.00 0.00 5.73
3734 4644 3.636231 CTCTCAACCCCGTGGCCA 61.636 66.667 0.00 0.00 33.59 5.36
3755 4665 2.803479 GTCGGCCCGAGTCGTAAT 59.197 61.111 5.82 0.00 43.20 1.89
3756 4666 1.588139 GTCGGCCCGAGTCGTAATG 60.588 63.158 5.82 0.00 43.20 1.90
3758 4668 2.185867 GGCCCGAGTCGTAATGCA 59.814 61.111 12.31 0.00 0.00 3.96
3777 4687 2.224402 GCAACTCCTCCAGACTCAACTT 60.224 50.000 0.00 0.00 0.00 2.66
3842 4756 3.632645 CCCTCCCCCTGAGTGTATTCTTA 60.633 52.174 0.00 0.00 39.65 2.10
3947 4861 3.375699 GAGGTCCCTAGATCTCCAAACA 58.624 50.000 0.00 0.00 43.48 2.83
3955 4869 5.131142 CCCTAGATCTCCAAACAACCACTAT 59.869 44.000 0.00 0.00 0.00 2.12
3959 4873 5.426833 AGATCTCCAAACAACCACTATAGCT 59.573 40.000 0.00 0.00 0.00 3.32
4043 4957 1.697432 TGATGACAACCGGGAAGTCTT 59.303 47.619 19.44 14.85 33.56 3.01
4084 4999 2.034066 CCGTCCTGGTGCCACATT 59.966 61.111 0.00 0.00 0.00 2.71
4085 5000 2.040544 CCGTCCTGGTGCCACATTC 61.041 63.158 0.00 0.00 0.00 2.67
4086 5001 2.040544 CGTCCTGGTGCCACATTCC 61.041 63.158 0.00 0.00 0.00 3.01
4095 5010 2.025418 GCCACATTCCGTCGTCGTT 61.025 57.895 0.71 0.00 35.01 3.85
4168 5083 4.101119 CGATGATAAACCCTAACCTCACCT 59.899 45.833 0.00 0.00 0.00 4.00
4183 5098 3.470888 CCTCCCCAACGAGGCGAT 61.471 66.667 0.00 0.00 43.01 4.58
4205 5120 0.963962 AAACCTACGTCGAAGCTCCA 59.036 50.000 0.00 0.00 0.00 3.86
4218 5133 2.898729 AGCTCCATCAACTATGTCCG 57.101 50.000 0.00 0.00 33.34 4.79
4221 5136 2.037772 GCTCCATCAACTATGTCCGGAT 59.962 50.000 7.81 0.00 33.34 4.18
4250 5165 1.152652 GAGGAGGATCAGAGCCCGA 60.153 63.158 0.00 0.00 36.25 5.14
4282 5197 2.434359 GAGGAAGCAACGGACCCG 60.434 66.667 6.94 6.94 46.03 5.28
4312 5227 3.119849 GCACATGCGAGGACAAAATAGTT 60.120 43.478 0.00 0.00 0.00 2.24
4317 5232 6.092259 ACATGCGAGGACAAAATAGTTCTAAC 59.908 38.462 0.00 0.00 0.00 2.34
4323 5238 8.870879 CGAGGACAAAATAGTTCTAACCTAAAG 58.129 37.037 0.00 0.00 0.00 1.85
4324 5239 9.163899 GAGGACAAAATAGTTCTAACCTAAAGG 57.836 37.037 0.00 0.00 42.17 3.11
4341 5256 8.676397 ACCTAAAGGTGAGGTTTTATAGTACT 57.324 34.615 0.00 0.00 45.40 2.73
4343 5258 8.202811 CCTAAAGGTGAGGTTTTATAGTACTCC 58.797 40.741 0.00 0.00 0.00 3.85
4345 5260 5.851418 AGGTGAGGTTTTATAGTACTCCCT 58.149 41.667 0.00 0.00 0.00 4.20
4346 5261 5.898397 AGGTGAGGTTTTATAGTACTCCCTC 59.102 44.000 0.00 6.66 37.97 4.30
4347 5262 5.070180 GGTGAGGTTTTATAGTACTCCCTCC 59.930 48.000 0.00 0.00 36.92 4.30
4349 5264 4.876580 AGGTTTTATAGTACTCCCTCCGT 58.123 43.478 0.00 0.00 0.00 4.69
4351 5266 5.362143 AGGTTTTATAGTACTCCCTCCGTTC 59.638 44.000 0.00 0.00 0.00 3.95
4352 5267 5.277047 GTTTTATAGTACTCCCTCCGTTCG 58.723 45.833 0.00 0.00 0.00 3.95
4353 5268 1.978454 ATAGTACTCCCTCCGTTCGG 58.022 55.000 0.00 4.74 0.00 4.30
4354 5269 0.911769 TAGTACTCCCTCCGTTCGGA 59.088 55.000 13.34 13.34 0.00 4.55
4365 5280 2.439409 TCCGTTCGGAGATACTTGTCA 58.561 47.619 10.00 0.00 35.04 3.58
4366 5281 3.021695 TCCGTTCGGAGATACTTGTCAT 58.978 45.455 10.00 0.00 35.04 3.06
4367 5282 3.066342 TCCGTTCGGAGATACTTGTCATC 59.934 47.826 10.00 0.00 35.04 2.92
4368 5283 3.181490 CCGTTCGGAGATACTTGTCATCA 60.181 47.826 5.19 0.00 35.04 3.07
4369 5284 4.421058 CGTTCGGAGATACTTGTCATCAA 58.579 43.478 0.00 0.00 35.04 2.57
4370 5285 4.862574 CGTTCGGAGATACTTGTCATCAAA 59.137 41.667 0.00 0.00 35.04 2.69
4371 5286 5.347635 CGTTCGGAGATACTTGTCATCAAAA 59.652 40.000 0.00 0.00 35.04 2.44
4373 5288 6.908870 TCGGAGATACTTGTCATCAAAATG 57.091 37.500 0.00 0.00 32.87 2.32
4374 5289 6.639563 TCGGAGATACTTGTCATCAAAATGA 58.360 36.000 0.00 0.00 39.63 2.57
4375 5290 7.102993 TCGGAGATACTTGTCATCAAAATGAA 58.897 34.615 0.00 0.00 43.42 2.57
4376 5291 7.770433 TCGGAGATACTTGTCATCAAAATGAAT 59.230 33.333 0.00 0.00 43.42 2.57
4377 5292 9.045223 CGGAGATACTTGTCATCAAAATGAATA 57.955 33.333 0.00 0.00 43.42 1.75
4384 5299 8.096414 ACTTGTCATCAAAATGAATAAAAGGGG 58.904 33.333 0.00 0.00 43.42 4.79
4386 5301 8.378115 TGTCATCAAAATGAATAAAAGGGGAT 57.622 30.769 0.00 0.00 43.42 3.85
4388 5303 8.260114 GTCATCAAAATGAATAAAAGGGGATGT 58.740 33.333 0.00 0.00 43.42 3.06
4389 5304 9.486123 TCATCAAAATGAATAAAAGGGGATGTA 57.514 29.630 0.00 0.00 38.97 2.29
4392 5307 9.713684 TCAAAATGAATAAAAGGGGATGTATCT 57.286 29.630 0.00 0.00 0.00 1.98
4429 5344 8.794335 AGTTCTAGATACATTCCTTTTTGTCC 57.206 34.615 0.00 0.00 0.00 4.02
4430 5345 8.383175 AGTTCTAGATACATTCCTTTTTGTCCA 58.617 33.333 0.00 0.00 0.00 4.02
4431 5346 9.178758 GTTCTAGATACATTCCTTTTTGTCCAT 57.821 33.333 0.00 0.00 0.00 3.41
4432 5347 9.753674 TTCTAGATACATTCCTTTTTGTCCATT 57.246 29.630 0.00 0.00 0.00 3.16
4433 5348 9.753674 TCTAGATACATTCCTTTTTGTCCATTT 57.246 29.630 0.00 0.00 0.00 2.32
4436 5351 8.869109 AGATACATTCCTTTTTGTCCATTTTGA 58.131 29.630 0.00 0.00 0.00 2.69
4441 5356 6.477053 TCCTTTTTGTCCATTTTGATGACA 57.523 33.333 0.00 0.00 0.00 3.58
4442 5357 6.882656 TCCTTTTTGTCCATTTTGATGACAA 58.117 32.000 0.00 0.00 34.47 3.18
4443 5358 6.985645 TCCTTTTTGTCCATTTTGATGACAAG 59.014 34.615 0.00 0.00 37.13 3.16
4444 5359 6.762661 CCTTTTTGTCCATTTTGATGACAAGT 59.237 34.615 0.00 0.00 37.13 3.16
4445 5360 7.280652 CCTTTTTGTCCATTTTGATGACAAGTT 59.719 33.333 0.00 0.00 37.13 2.66
4446 5361 8.558973 TTTTTGTCCATTTTGATGACAAGTTT 57.441 26.923 0.00 0.00 37.13 2.66
4447 5362 8.558973 TTTTGTCCATTTTGATGACAAGTTTT 57.441 26.923 0.00 0.00 37.13 2.43
4448 5363 8.558973 TTTGTCCATTTTGATGACAAGTTTTT 57.441 26.923 0.00 0.00 37.13 1.94
4483 5398 0.539051 ACTCGCCAAGGGATCAAGAG 59.461 55.000 0.00 0.00 0.00 2.85
4489 5404 2.553028 GCCAAGGGATCAAGAGACACAA 60.553 50.000 0.00 0.00 0.00 3.33
4491 5406 3.755378 CCAAGGGATCAAGAGACACAAAG 59.245 47.826 0.00 0.00 0.00 2.77
4495 5410 4.103153 AGGGATCAAGAGACACAAAGACAA 59.897 41.667 0.00 0.00 0.00 3.18
4496 5411 4.214332 GGGATCAAGAGACACAAAGACAAC 59.786 45.833 0.00 0.00 0.00 3.32
4497 5412 5.059833 GGATCAAGAGACACAAAGACAACT 58.940 41.667 0.00 0.00 0.00 3.16
4498 5413 5.049818 GGATCAAGAGACACAAAGACAACTG 60.050 44.000 0.00 0.00 0.00 3.16
4499 5414 4.191544 TCAAGAGACACAAAGACAACTGG 58.808 43.478 0.00 0.00 0.00 4.00
4500 5415 3.199880 AGAGACACAAAGACAACTGGG 57.800 47.619 0.00 0.00 0.00 4.45
4503 5418 1.334869 GACACAAAGACAACTGGGCAG 59.665 52.381 0.00 0.00 0.00 4.85
4504 5419 0.031178 CACAAAGACAACTGGGCAGC 59.969 55.000 0.00 0.00 0.00 5.25
4505 5420 0.106519 ACAAAGACAACTGGGCAGCT 60.107 50.000 0.00 0.00 0.00 4.24
4506 5421 0.595095 CAAAGACAACTGGGCAGCTC 59.405 55.000 0.00 0.00 0.00 4.09
4507 5422 0.475906 AAAGACAACTGGGCAGCTCT 59.524 50.000 0.00 0.00 0.00 4.09
4508 5423 0.250640 AAGACAACTGGGCAGCTCTG 60.251 55.000 0.00 0.00 0.00 3.35
4509 5424 1.673665 GACAACTGGGCAGCTCTGG 60.674 63.158 3.91 0.00 0.00 3.86
4548 5498 1.234529 CTCCTGGTAGCCCTAGCCT 59.765 63.158 0.00 0.00 41.25 4.58
4563 5513 4.464008 CCTAGCCTTGGCAAAGATGATAA 58.536 43.478 14.54 0.00 35.19 1.75
4576 5526 6.474751 GCAAAGATGATAACTTGCCATTCTTC 59.525 38.462 0.00 0.00 0.00 2.87
4577 5527 7.541162 CAAAGATGATAACTTGCCATTCTTCA 58.459 34.615 0.00 0.00 0.00 3.02
4592 5542 0.689623 CTTCAGCCACCACTTCTCCT 59.310 55.000 0.00 0.00 0.00 3.69
4607 5557 3.577649 TCTCCTCTTCAACGACATGAC 57.422 47.619 0.00 0.00 0.00 3.06
4622 5572 0.180406 ATGACGGAATACTGCCCCAC 59.820 55.000 0.00 0.00 0.00 4.61
4715 5668 1.113788 TTGCCAAGCAGAGCAACTTT 58.886 45.000 3.50 0.00 43.74 2.66
4803 7070 1.134907 CAAGGATGCTTGTGGCCATTC 60.135 52.381 18.09 0.00 40.92 2.67
4834 7101 6.650390 GGCACCAATTCATCAAGTTTGTTAAT 59.350 34.615 0.00 0.00 0.00 1.40
4871 7138 3.649073 TGAATGTGTCTCAGTAACACCG 58.351 45.455 4.14 0.00 45.10 4.94
4977 7250 1.270947 TGCCTACCAACTAACCCAACG 60.271 52.381 0.00 0.00 0.00 4.10
5014 7287 1.373435 CAACCACCAGGAACCGCTA 59.627 57.895 0.00 0.00 38.69 4.26
5057 7331 0.257039 CCTGAATTCTCACCTGGGGG 59.743 60.000 7.05 0.00 38.88 5.40
5113 7394 1.544246 GTGGACACAAGCCATTTACCC 59.456 52.381 0.00 0.00 37.81 3.69
5129 7410 1.898574 CCCGGGCCTTATGATGCAC 60.899 63.158 8.08 0.00 0.00 4.57
5200 7481 0.627986 ATTTCTCCCCTTGCCTGAGG 59.372 55.000 0.00 0.00 36.52 3.86
5225 7506 6.041423 GTGTAACAACCCCTTAACTAGCTA 57.959 41.667 0.00 0.00 36.32 3.32
5248 7529 1.065551 GTGGCACCACAAAGTTCAGTC 59.934 52.381 14.97 0.00 45.53 3.51
5249 7530 0.668535 GGCACCACAAAGTTCAGTCC 59.331 55.000 0.00 0.00 0.00 3.85
5250 7531 0.668535 GCACCACAAAGTTCAGTCCC 59.331 55.000 0.00 0.00 0.00 4.46
5251 7532 1.318576 CACCACAAAGTTCAGTCCCC 58.681 55.000 0.00 0.00 0.00 4.81
5252 7533 0.185175 ACCACAAAGTTCAGTCCCCC 59.815 55.000 0.00 0.00 0.00 5.40
5278 7753 2.158519 CCTCTCCCCTTCTCCTAGTCTC 60.159 59.091 0.00 0.00 0.00 3.36
5314 7789 5.329399 AGCCACCATTTGATGTAAACCTAA 58.671 37.500 0.00 0.00 0.00 2.69
5381 7856 8.382875 GCTTAAATTGCAACCATTAGTCATTTC 58.617 33.333 0.00 0.00 0.00 2.17
5433 7908 9.496873 TTTCGAGGAGTATTTGAAGATTAAACA 57.503 29.630 0.00 0.00 0.00 2.83
5588 8063 4.822036 TCGAAAGTACCCACAAATGTTG 57.178 40.909 0.00 0.00 0.00 3.33
5598 8073 3.368323 CCCACAAATGTTGTAGGCCATTC 60.368 47.826 5.01 0.00 43.23 2.67
5641 8116 9.354673 TCTAATTGGTTTCTCAACATTTTCTCT 57.645 29.630 0.00 0.00 34.15 3.10
5644 8119 4.644234 TGGTTTCTCAACATTTTCTCTGCA 59.356 37.500 0.00 0.00 34.15 4.41
5780 8256 1.909700 ACACAACATAGGCAACCCTG 58.090 50.000 0.00 0.00 42.90 4.45
5873 8351 2.030185 GCTGTGTACTCGAGGAAGTGAA 60.030 50.000 18.41 0.00 0.00 3.18
5888 8366 2.002586 AGTGAATTTCGCGGACATGAG 58.997 47.619 6.13 0.00 30.95 2.90
5905 8383 8.750298 CGGACATGAGTTAGGTTCCTATTATAT 58.250 37.037 0.00 0.00 0.00 0.86
5917 8395 9.561069 AGGTTCCTATTATATTGTAGTGCTTTG 57.439 33.333 0.00 0.00 0.00 2.77
5918 8396 8.290325 GGTTCCTATTATATTGTAGTGCTTTGC 58.710 37.037 0.00 0.00 0.00 3.68
5934 8412 7.147976 AGTGCTTTGCTATTGTTTTCCTTTAG 58.852 34.615 0.00 0.00 0.00 1.85
5953 8431 7.790798 TCCTTTAGTAACAGGTATATGGCCTAA 59.209 37.037 3.32 0.00 34.45 2.69
5986 8464 6.397272 TCGCTGCCAAAATTTAGAATTTCAT 58.603 32.000 0.00 0.00 0.00 2.57
6039 8517 6.044046 TGTTTCTTGAACTTCGCACTAAGTA 58.956 36.000 0.00 0.00 38.76 2.24
6134 8612 3.420893 TCCAATCTTTTCGGTGAGCATT 58.579 40.909 0.00 0.00 0.00 3.56
6135 8613 3.191162 TCCAATCTTTTCGGTGAGCATTG 59.809 43.478 0.00 0.00 0.00 2.82
6296 8774 2.525105 ACCTGAACCACACAAAAGGT 57.475 45.000 0.00 0.00 40.61 3.50
6303 8781 5.931294 TGAACCACACAAAAGGTACATCTA 58.069 37.500 0.00 0.00 37.07 1.98
6353 8831 2.594592 GGCGTCCAGGTGCAACTT 60.595 61.111 0.00 0.00 36.74 2.66
6363 8841 2.554032 CAGGTGCAACTTCCTACCTTTG 59.446 50.000 0.00 0.00 41.42 2.77
6364 8842 2.174854 AGGTGCAACTTCCTACCTTTGT 59.825 45.455 0.00 0.00 40.51 2.83
6365 8843 3.393278 AGGTGCAACTTCCTACCTTTGTA 59.607 43.478 0.00 0.00 40.51 2.41
6366 8844 3.501062 GGTGCAACTTCCTACCTTTGTAC 59.499 47.826 0.00 0.00 36.74 2.90
6367 8845 4.386711 GTGCAACTTCCTACCTTTGTACT 58.613 43.478 0.00 0.00 33.36 2.73
6368 8846 4.213482 GTGCAACTTCCTACCTTTGTACTG 59.787 45.833 0.00 0.00 33.36 2.74
6477 8955 2.287849 ACGGATGCAGATGTGTAGATCG 60.288 50.000 0.00 0.00 0.00 3.69
6486 8964 3.251245 AGATGTGTAGATCGGAAGCTACG 59.749 47.826 13.32 4.50 39.79 3.51
6532 9010 2.180946 TGAGGCATACCAGAGGTGAT 57.819 50.000 0.00 0.00 36.19 3.06
6536 9014 1.486310 GGCATACCAGAGGTGATGACA 59.514 52.381 0.00 0.00 36.19 3.58
6809 9287 2.731976 CAGAATACGCTAATTCGGCTCC 59.268 50.000 3.17 0.00 40.19 4.70
6981 9460 1.134367 TGAAGGAGAAGGTATGCGTCG 59.866 52.381 0.00 0.00 0.00 5.12
6990 9475 0.249073 GGTATGCGTCGACATCTGCT 60.249 55.000 17.16 3.81 0.00 4.24
7125 9614 2.547211 AGCATGATCAAGATAAGTGCGC 59.453 45.455 0.00 0.00 36.32 6.09
7155 9644 9.054922 TGACATGATGGTTATGTATGTGTATTG 57.945 33.333 0.00 0.00 38.78 1.90
7263 9752 1.950828 CTGCTGAAAGATCGCCTGAT 58.049 50.000 0.00 0.00 37.60 2.90
7403 9904 8.877753 GATTGATTAAATCTGCTCAATCGATC 57.122 34.615 0.00 7.34 42.15 3.69
7404 9905 7.790823 TTGATTAAATCTGCTCAATCGATCA 57.209 32.000 0.00 0.00 31.43 2.92
7405 9906 7.417496 TGATTAAATCTGCTCAATCGATCAG 57.583 36.000 0.00 1.54 36.84 2.90
7406 9907 6.988580 TGATTAAATCTGCTCAATCGATCAGT 59.011 34.615 0.00 0.00 36.85 3.41
7488 9989 0.469331 AGGTCGGTGTGAGACTGGAA 60.469 55.000 0.00 0.00 38.58 3.53
7605 10151 4.067896 TGTGAAAGTTGAGCTGAATCCTC 58.932 43.478 0.00 0.00 0.00 3.71
7648 10194 0.820482 CGATGCCAATGCTGGATGGA 60.820 55.000 0.00 0.00 46.92 3.41
7664 10210 6.620877 TGGATGGATGAGTTTAGTTACACT 57.379 37.500 0.00 0.00 0.00 3.55
7665 10211 6.406370 TGGATGGATGAGTTTAGTTACACTG 58.594 40.000 0.00 0.00 0.00 3.66
7672 10218 5.054477 TGAGTTTAGTTACACTGGCACTTC 58.946 41.667 0.00 0.00 0.00 3.01
7701 10372 4.816048 AGATACTCCTATCTGTGGACCA 57.184 45.455 0.00 0.00 38.17 4.02
7702 10373 5.346782 AGATACTCCTATCTGTGGACCAT 57.653 43.478 0.00 0.00 38.17 3.55
7703 10374 5.083122 AGATACTCCTATCTGTGGACCATG 58.917 45.833 0.00 0.00 38.17 3.66
7704 10375 1.765314 ACTCCTATCTGTGGACCATGC 59.235 52.381 0.00 0.00 0.00 4.06
7705 10376 1.764723 CTCCTATCTGTGGACCATGCA 59.235 52.381 0.00 0.00 0.00 3.96
7706 10377 2.371179 CTCCTATCTGTGGACCATGCAT 59.629 50.000 0.00 0.00 0.00 3.96
7707 10378 2.105306 TCCTATCTGTGGACCATGCATG 59.895 50.000 20.19 20.19 0.00 4.06
7708 10379 1.878088 CTATCTGTGGACCATGCATGC 59.122 52.381 21.69 11.82 0.00 4.06
7711 10382 1.663379 CTGTGGACCATGCATGCCAG 61.663 60.000 22.05 16.23 0.00 4.85
7713 10384 0.966875 GTGGACCATGCATGCCAGAA 60.967 55.000 22.05 5.03 0.00 3.02
7716 10387 0.179156 GACCATGCATGCCAGAAACG 60.179 55.000 21.69 7.44 0.00 3.60
7718 10389 1.597797 CCATGCATGCCAGAAACGGT 61.598 55.000 21.69 0.00 0.00 4.83
7725 10396 1.529226 TGCCAGAAACGGTATGTTGG 58.471 50.000 0.00 0.00 40.84 3.77
7740 10411 7.119262 ACGGTATGTTGGAAAGATGTTAGAAAG 59.881 37.037 0.00 0.00 29.89 2.62
7771 10442 3.938289 TGCAAAATGAAGCAGCATACA 57.062 38.095 0.00 0.00 35.51 2.29
7798 10469 7.203255 ACAGTTTTTGTGGATCTTAGCTTAC 57.797 36.000 0.00 0.00 38.99 2.34
7831 10502 4.722361 GGCTAGCCCATCTAGTATGTAC 57.278 50.000 24.19 0.00 45.22 2.90
7863 10534 9.012161 TCATTAATTTTGCGGATCATCATCATA 57.988 29.630 0.00 0.00 0.00 2.15
7887 10578 1.550065 CGTCTAGGTTGACAGCATCG 58.450 55.000 0.00 0.00 36.82 3.84
7897 10588 1.975363 GACAGCATCGCCTCAAGCAC 61.975 60.000 0.00 0.00 44.04 4.40
7952 10643 0.100682 GATCGGTCACTCGCTTGCTA 59.899 55.000 0.00 0.00 0.00 3.49
7963 10654 1.376037 GCTTGCTAGCGTGTTCCCT 60.376 57.895 10.77 0.00 37.71 4.20
7978 10669 0.753479 TCCCTTTTTGCAGGCGTCAA 60.753 50.000 0.00 0.00 31.69 3.18
7983 10674 1.961793 TTTTGCAGGCGTCAACTACT 58.038 45.000 0.00 0.00 0.00 2.57
7992 10683 1.937359 CGTCAACTACTGCAAAAGCG 58.063 50.000 0.00 0.00 0.00 4.68
8027 10718 1.918293 AAGACATCCACCGGCCTCA 60.918 57.895 0.00 0.00 0.00 3.86
8034 10725 2.367202 CCACCGGCCTCACCTACAT 61.367 63.158 0.00 0.00 35.61 2.29
8040 10731 0.535335 GGCCTCACCTACATCGTTCA 59.465 55.000 0.00 0.00 34.51 3.18
8130 10822 9.852091 GAAGCATCAGATCAGTTTATTCTTTTT 57.148 29.630 0.00 0.00 0.00 1.94
8131 10823 9.852091 AAGCATCAGATCAGTTTATTCTTTTTC 57.148 29.630 0.00 0.00 0.00 2.29
8132 10824 9.240734 AGCATCAGATCAGTTTATTCTTTTTCT 57.759 29.630 0.00 0.00 0.00 2.52
8133 10825 9.500864 GCATCAGATCAGTTTATTCTTTTTCTC 57.499 33.333 0.00 0.00 0.00 2.87
8247 10946 9.566432 TCAAATTATGTGGGCAAACTTTTTAAT 57.434 25.926 0.00 0.00 0.00 1.40
8325 11027 7.816995 GGACATTTAACTGCCATGATTTTTGTA 59.183 33.333 0.00 0.00 0.00 2.41
8326 11028 9.202273 GACATTTAACTGCCATGATTTTTGTAA 57.798 29.630 0.00 0.00 0.00 2.41
8327 11029 9.206870 ACATTTAACTGCCATGATTTTTGTAAG 57.793 29.630 0.00 0.00 0.00 2.34
8328 11030 9.421806 CATTTAACTGCCATGATTTTTGTAAGA 57.578 29.630 0.00 0.00 0.00 2.10
8329 11031 8.810652 TTTAACTGCCATGATTTTTGTAAGAC 57.189 30.769 0.00 0.00 0.00 3.01
8330 11032 5.046910 ACTGCCATGATTTTTGTAAGACG 57.953 39.130 0.00 0.00 0.00 4.18
8331 11033 3.832276 TGCCATGATTTTTGTAAGACGC 58.168 40.909 0.00 0.00 0.00 5.19
8332 11034 3.254411 TGCCATGATTTTTGTAAGACGCA 59.746 39.130 0.00 0.00 0.00 5.24
8333 11035 3.853671 GCCATGATTTTTGTAAGACGCAG 59.146 43.478 0.00 0.00 0.00 5.18
8350 11052 4.743493 ACGCAGTTCACAAACAAAAATCT 58.257 34.783 0.00 0.00 37.78 2.40
8351 11053 5.885881 ACGCAGTTCACAAACAAAAATCTA 58.114 33.333 0.00 0.00 37.78 1.98
8352 11054 6.326375 ACGCAGTTCACAAACAAAAATCTAA 58.674 32.000 0.00 0.00 37.78 2.10
8353 11055 6.472163 ACGCAGTTCACAAACAAAAATCTAAG 59.528 34.615 0.00 0.00 37.78 2.18
8354 11056 6.472163 CGCAGTTCACAAACAAAAATCTAAGT 59.528 34.615 0.00 0.00 37.88 2.24
8355 11057 7.009174 CGCAGTTCACAAACAAAAATCTAAGTT 59.991 33.333 0.00 0.00 37.88 2.66
8356 11058 8.655970 GCAGTTCACAAACAAAAATCTAAGTTT 58.344 29.630 0.00 0.00 37.88 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
240 251 3.496130 GTCTTAATCGATGCCTGACATGG 59.504 47.826 0.00 0.00 39.84 3.66
249 260 6.089150 GGTTAGGTTATCGTCTTAATCGATGC 59.911 42.308 19.10 13.65 45.54 3.91
253 264 6.636044 GTCTGGTTAGGTTATCGTCTTAATCG 59.364 42.308 0.00 0.00 0.00 3.34
263 279 2.704596 GGGGAGGTCTGGTTAGGTTATC 59.295 54.545 0.00 0.00 0.00 1.75
275 291 5.530176 TTTTGCTTATTTAGGGGAGGTCT 57.470 39.130 0.00 0.00 0.00 3.85
321 337 8.865420 TTATTTTTGGGTAGCAAGTACATACA 57.135 30.769 0.00 0.00 32.62 2.29
360 428 9.826574 TTGCTTAATCCGTAGTAGTATCATTTT 57.173 29.630 0.00 0.00 0.00 1.82
362 430 8.639761 ACTTGCTTAATCCGTAGTAGTATCATT 58.360 33.333 0.00 0.00 0.00 2.57
364 432 7.255381 GGACTTGCTTAATCCGTAGTAGTATCA 60.255 40.741 0.00 0.00 0.00 2.15
365 433 7.040548 AGGACTTGCTTAATCCGTAGTAGTATC 60.041 40.741 0.00 0.00 37.60 2.24
367 435 6.125029 AGGACTTGCTTAATCCGTAGTAGTA 58.875 40.000 0.00 0.00 37.60 1.82
368 436 4.954826 AGGACTTGCTTAATCCGTAGTAGT 59.045 41.667 0.00 0.00 37.60 2.73
369 437 5.517322 AGGACTTGCTTAATCCGTAGTAG 57.483 43.478 0.00 0.00 37.60 2.57
370 438 5.008019 CGTAGGACTTGCTTAATCCGTAGTA 59.992 44.000 0.00 0.00 37.60 1.82
371 439 4.201990 CGTAGGACTTGCTTAATCCGTAGT 60.202 45.833 0.00 0.00 37.60 2.73
372 440 4.288531 CGTAGGACTTGCTTAATCCGTAG 58.711 47.826 0.00 0.00 37.60 3.51
373 441 4.297299 CGTAGGACTTGCTTAATCCGTA 57.703 45.455 0.00 0.00 37.60 4.02
374 442 3.160777 CGTAGGACTTGCTTAATCCGT 57.839 47.619 0.00 0.00 37.60 4.69
393 461 2.594303 TGGAAACTGCTGCCACCG 60.594 61.111 0.00 0.00 0.00 4.94
746 814 2.620115 ACATGTGCATCCCGATTGATTC 59.380 45.455 0.00 0.00 0.00 2.52
747 815 2.359848 CACATGTGCATCCCGATTGATT 59.640 45.455 13.94 0.00 0.00 2.57
748 816 1.951602 CACATGTGCATCCCGATTGAT 59.048 47.619 13.94 0.00 0.00 2.57
749 817 1.381522 CACATGTGCATCCCGATTGA 58.618 50.000 13.94 0.00 0.00 2.57
750 818 0.382873 CCACATGTGCATCCCGATTG 59.617 55.000 20.81 0.00 0.00 2.67
751 819 0.255604 TCCACATGTGCATCCCGATT 59.744 50.000 20.81 0.00 0.00 3.34
752 820 0.475475 ATCCACATGTGCATCCCGAT 59.525 50.000 20.81 13.00 0.00 4.18
753 821 0.464193 CATCCACATGTGCATCCCGA 60.464 55.000 20.81 11.22 0.00 5.14
869 941 2.770827 CAAAAGGGGGAGGGGGAC 59.229 66.667 0.00 0.00 0.00 4.46
971 1043 2.553466 CGGACGGATCTAGGAAGGATCT 60.553 54.545 0.00 0.00 39.41 2.75
972 1044 1.813786 CGGACGGATCTAGGAAGGATC 59.186 57.143 0.00 0.00 38.92 3.36
973 1045 1.145325 ACGGACGGATCTAGGAAGGAT 59.855 52.381 0.00 0.00 0.00 3.24
974 1046 0.549950 ACGGACGGATCTAGGAAGGA 59.450 55.000 0.00 0.00 0.00 3.36
978 1050 0.395686 ATCGACGGACGGATCTAGGA 59.604 55.000 0.00 0.00 42.82 2.94
981 1053 0.107268 TGGATCGACGGACGGATCTA 59.893 55.000 9.62 3.11 42.82 1.98
982 1054 0.537600 ATGGATCGACGGACGGATCT 60.538 55.000 9.62 0.00 42.82 2.75
983 1055 0.387367 CATGGATCGACGGACGGATC 60.387 60.000 0.00 0.00 42.82 3.36
1305 1392 2.043652 TAGGGTTAGCGAGCGGGT 60.044 61.111 0.00 0.00 0.00 5.28
1314 1401 2.448453 CCGATCTAGGGCTAGGGTTAG 58.552 57.143 0.00 0.00 34.06 2.34
1373 1460 6.585695 ACGATTAAATCTAGAGGCGGATTA 57.414 37.500 0.00 0.00 32.65 1.75
1407 1494 1.559682 ACGGACAGTGCCCTTGATTAT 59.440 47.619 0.00 0.00 0.00 1.28
1408 1495 0.981183 ACGGACAGTGCCCTTGATTA 59.019 50.000 0.00 0.00 0.00 1.75
1448 1540 3.073798 AGAGAGAGAGAGTGACAGTGGAA 59.926 47.826 0.00 0.00 0.00 3.53
1449 1541 2.642311 AGAGAGAGAGAGTGACAGTGGA 59.358 50.000 0.00 0.00 0.00 4.02
1456 1548 4.860802 ATTCCTGAGAGAGAGAGAGTGA 57.139 45.455 0.00 0.00 0.00 3.41
1462 1558 4.420206 TCACCAAATTCCTGAGAGAGAGA 58.580 43.478 0.00 0.00 0.00 3.10
1463 1559 4.465660 TCTCACCAAATTCCTGAGAGAGAG 59.534 45.833 5.85 0.00 36.37 3.20
1466 1562 5.768980 AATCTCACCAAATTCCTGAGAGA 57.231 39.130 12.62 9.01 42.80 3.10
1470 1566 7.413446 AGGAATAAATCTCACCAAATTCCTGA 58.587 34.615 12.38 0.00 46.79 3.86
1471 1567 7.651027 AGGAATAAATCTCACCAAATTCCTG 57.349 36.000 12.38 0.00 46.79 3.86
1473 1569 7.067008 TCGAAGGAATAAATCTCACCAAATTCC 59.933 37.037 4.14 4.14 41.67 3.01
1474 1570 7.985476 TCGAAGGAATAAATCTCACCAAATTC 58.015 34.615 0.00 0.00 0.00 2.17
1475 1571 7.611855 ACTCGAAGGAATAAATCTCACCAAATT 59.388 33.333 0.00 0.00 0.00 1.82
1476 1572 7.112779 ACTCGAAGGAATAAATCTCACCAAAT 58.887 34.615 0.00 0.00 0.00 2.32
1480 1576 5.232414 CGAACTCGAAGGAATAAATCTCACC 59.768 44.000 0.00 0.00 43.02 4.02
1481 1577 6.034591 TCGAACTCGAAGGAATAAATCTCAC 58.965 40.000 0.00 0.00 46.30 3.51
1503 1601 1.721389 CCGCATCCATCTAAACGATCG 59.279 52.381 14.88 14.88 0.00 3.69
1513 1611 3.599704 GCCTTGCCCGCATCCATC 61.600 66.667 0.00 0.00 0.00 3.51
1548 1649 8.707449 ACCCTATAACAGTGGTTTAATTATCGA 58.293 33.333 0.00 0.00 38.45 3.59
1549 1650 8.897872 ACCCTATAACAGTGGTTTAATTATCG 57.102 34.615 0.00 0.00 38.45 2.92
1587 1688 6.989759 GGTGTGTCAAAATTATTTCCTGGTTT 59.010 34.615 0.00 0.00 0.00 3.27
1590 1691 6.345096 AGGTGTGTCAAAATTATTTCCTGG 57.655 37.500 0.00 0.00 0.00 4.45
1591 1692 8.661352 AAAAGGTGTGTCAAAATTATTTCCTG 57.339 30.769 0.00 0.00 0.00 3.86
1593 1694 7.650104 TCGAAAAGGTGTGTCAAAATTATTTCC 59.350 33.333 0.00 0.00 0.00 3.13
1594 1695 8.568732 TCGAAAAGGTGTGTCAAAATTATTTC 57.431 30.769 0.00 0.00 0.00 2.17
1595 1696 8.194769 ACTCGAAAAGGTGTGTCAAAATTATTT 58.805 29.630 0.00 0.00 0.00 1.40
1596 1697 7.712797 ACTCGAAAAGGTGTGTCAAAATTATT 58.287 30.769 0.00 0.00 0.00 1.40
1597 1698 7.272037 ACTCGAAAAGGTGTGTCAAAATTAT 57.728 32.000 0.00 0.00 0.00 1.28
1598 1699 6.687081 ACTCGAAAAGGTGTGTCAAAATTA 57.313 33.333 0.00 0.00 0.00 1.40
1602 1703 6.370442 CCATATACTCGAAAAGGTGTGTCAAA 59.630 38.462 0.00 0.00 0.00 2.69
1603 1704 5.872617 CCATATACTCGAAAAGGTGTGTCAA 59.127 40.000 0.00 0.00 0.00 3.18
1605 1706 5.416947 ACCATATACTCGAAAAGGTGTGTC 58.583 41.667 0.00 0.00 0.00 3.67
1641 1906 9.696917 CTAAAAACAGCAAGGAATCTGTAATTT 57.303 29.630 0.00 0.00 42.19 1.82
1714 1990 0.663153 GCCAGCACGAGTGACTTTTT 59.337 50.000 7.50 0.00 0.00 1.94
1749 2025 9.061435 GGATTACTAGATTGGGAAGAAAATCAG 57.939 37.037 0.00 0.00 35.63 2.90
1775 2055 5.473162 TGGTTGTTGGAGTCATAACAAGATG 59.527 40.000 19.28 0.00 44.60 2.90
1828 2111 5.924356 TCACAAACAGTTCATAGTTGAGGA 58.076 37.500 0.00 0.00 32.27 3.71
1866 2149 4.142071 ACTGTGTAGTCCTATGATGCAGTG 60.142 45.833 0.00 0.00 34.02 3.66
1870 2153 5.178797 ACAAACTGTGTAGTCCTATGATGC 58.821 41.667 0.00 0.00 39.29 3.91
1882 2170 6.745159 TTGTGCTAAGAAACAAACTGTGTA 57.255 33.333 0.00 0.00 40.60 2.90
1914 2202 4.681512 GCCAGCAAGAAAATAATCAAGGGG 60.682 45.833 0.00 0.00 0.00 4.79
1920 2208 4.158394 TCCACTGCCAGCAAGAAAATAATC 59.842 41.667 0.00 0.00 0.00 1.75
1926 2362 0.183492 ACTCCACTGCCAGCAAGAAA 59.817 50.000 0.00 0.00 0.00 2.52
1929 2365 1.160137 GTTACTCCACTGCCAGCAAG 58.840 55.000 0.00 0.00 0.00 4.01
1934 2370 0.399833 TGCATGTTACTCCACTGCCA 59.600 50.000 0.00 0.00 31.89 4.92
1935 2371 1.402968 CATGCATGTTACTCCACTGCC 59.597 52.381 18.91 0.00 31.89 4.85
1950 2386 2.124024 GCAGGCCAGGATCATGCA 60.124 61.111 5.01 0.00 36.88 3.96
1973 2415 1.600164 CGAACGAACGTGTCCAGGTAA 60.600 52.381 0.00 0.00 0.00 2.85
2030 2472 0.031178 AGTCCGTTCGTACCACACAC 59.969 55.000 0.00 0.00 0.00 3.82
2052 2496 4.993584 CGAAGCAGCCAGTTCAAGATATAT 59.006 41.667 0.00 0.00 0.00 0.86
2053 2497 4.371786 CGAAGCAGCCAGTTCAAGATATA 58.628 43.478 0.00 0.00 0.00 0.86
2093 2537 2.099098 GGCAAAGTACAGGCGCATTTAT 59.901 45.455 10.83 0.00 0.00 1.40
2118 2562 3.133362 TCGGTATGATAGTTGGTGGGTTC 59.867 47.826 0.00 0.00 0.00 3.62
2209 2653 4.274794 TCTGGCTAGTAAAGTATGGGGA 57.725 45.455 0.00 0.00 0.00 4.81
2225 2673 7.210174 TCACTGTATTTCATGTACTATCTGGC 58.790 38.462 0.00 0.00 0.00 4.85
2312 2760 5.936956 CCAAAAGAGAAATAGCAGACAGAGT 59.063 40.000 0.00 0.00 0.00 3.24
2316 2764 5.241403 TCCCAAAAGAGAAATAGCAGACA 57.759 39.130 0.00 0.00 0.00 3.41
2318 2766 6.049149 CGTATCCCAAAAGAGAAATAGCAGA 58.951 40.000 0.00 0.00 0.00 4.26
2355 2839 1.617850 TGTTGGCCATTCATTCCACAC 59.382 47.619 6.09 0.00 0.00 3.82
2377 2861 6.718454 TCTCATCAGGCAAAAAGAAAGAAGAT 59.282 34.615 0.00 0.00 0.00 2.40
2379 2863 6.206243 TCTCTCATCAGGCAAAAAGAAAGAAG 59.794 38.462 0.00 0.00 0.00 2.85
2446 2940 4.796830 CCAATCAAAATCAGTCTCGCAATG 59.203 41.667 0.00 0.00 0.00 2.82
2467 2961 5.003804 GCAATTAGAGGTTTCTCAGTTCCA 58.996 41.667 0.00 0.00 42.34 3.53
2476 2970 4.651994 CATCACGTGCAATTAGAGGTTTC 58.348 43.478 11.67 0.00 0.00 2.78
2565 3060 5.012239 ACATATCAAATGAACTGCCACACT 58.988 37.500 0.00 0.00 0.00 3.55
2595 3090 3.640967 AGGCACCTTGTTGCATTTTAAGA 59.359 39.130 0.00 0.00 44.94 2.10
2616 3111 7.891183 TGGAGAGTTCTATCGAAAAGAAAAG 57.109 36.000 13.39 0.00 34.86 2.27
2622 3118 9.667107 ATTTAACATGGAGAGTTCTATCGAAAA 57.333 29.630 0.00 0.00 0.00 2.29
2626 3122 7.169982 GTGGATTTAACATGGAGAGTTCTATCG 59.830 40.741 0.00 0.00 0.00 2.92
2651 3147 5.039645 TGAGAATTATTCCAGAAGGGGAGT 58.960 41.667 0.78 0.00 38.42 3.85
2654 3150 8.166061 TCATATTGAGAATTATTCCAGAAGGGG 58.834 37.037 0.78 0.00 37.22 4.79
2702 3198 3.936453 GACAGTGTAACAACAACCTGACA 59.064 43.478 0.00 0.00 41.43 3.58
2707 3203 4.603231 TTTCGACAGTGTAACAACAACC 57.397 40.909 0.00 0.00 41.43 3.77
3035 3535 4.803098 ACTACGTGAAAGTTCATAGCCT 57.197 40.909 0.00 0.00 39.73 4.58
3068 3568 3.349927 TGATTTCCTGTTCATCCTGCAG 58.650 45.455 6.78 6.78 0.00 4.41
3212 3718 9.720769 GCCAATTAGTTAGATATTTGCCTACTA 57.279 33.333 0.00 0.00 0.00 1.82
3231 3737 5.437060 GAGAACTACTGAATGGGCCAATTA 58.563 41.667 11.89 0.00 0.00 1.40
3242 3748 3.309265 GGGGAGAGAGGAGAACTACTGAA 60.309 52.174 0.00 0.00 0.00 3.02
3256 3762 2.551270 ACTGCAACTATTGGGGAGAGA 58.449 47.619 0.00 0.00 0.00 3.10
3263 3769 2.095263 CGACCCAAACTGCAACTATTGG 60.095 50.000 10.82 10.82 41.57 3.16
3264 3770 2.095263 CCGACCCAAACTGCAACTATTG 60.095 50.000 0.00 0.00 0.00 1.90
3265 3771 2.159382 CCGACCCAAACTGCAACTATT 58.841 47.619 0.00 0.00 0.00 1.73
3266 3772 1.349688 TCCGACCCAAACTGCAACTAT 59.650 47.619 0.00 0.00 0.00 2.12
3267 3773 0.759959 TCCGACCCAAACTGCAACTA 59.240 50.000 0.00 0.00 0.00 2.24
3268 3774 0.110486 ATCCGACCCAAACTGCAACT 59.890 50.000 0.00 0.00 0.00 3.16
3269 3775 0.958822 AATCCGACCCAAACTGCAAC 59.041 50.000 0.00 0.00 0.00 4.17
3270 3776 1.202879 AGAATCCGACCCAAACTGCAA 60.203 47.619 0.00 0.00 0.00 4.08
3271 3777 0.400213 AGAATCCGACCCAAACTGCA 59.600 50.000 0.00 0.00 0.00 4.41
3272 3778 1.087501 GAGAATCCGACCCAAACTGC 58.912 55.000 0.00 0.00 0.00 4.40
3273 3779 2.622436 GAGAGAATCCGACCCAAACTG 58.378 52.381 0.00 0.00 33.66 3.16
3274 3780 1.555533 GGAGAGAATCCGACCCAAACT 59.444 52.381 0.00 0.00 38.67 2.66
3275 3781 2.025589 GGAGAGAATCCGACCCAAAC 57.974 55.000 0.00 0.00 38.67 2.93
3284 3790 4.451629 TTTCTACACACGGAGAGAATCC 57.548 45.455 0.00 0.00 45.64 3.01
3285 3791 6.590292 TGAATTTTCTACACACGGAGAGAATC 59.410 38.462 0.00 0.00 29.02 2.52
3286 3792 6.369065 GTGAATTTTCTACACACGGAGAGAAT 59.631 38.462 0.00 0.00 35.06 2.40
3287 3793 5.694910 GTGAATTTTCTACACACGGAGAGAA 59.305 40.000 0.00 0.00 35.06 2.87
3288 3794 5.010719 AGTGAATTTTCTACACACGGAGAGA 59.989 40.000 0.00 0.00 37.05 3.10
3289 3795 5.230942 AGTGAATTTTCTACACACGGAGAG 58.769 41.667 0.00 0.00 37.05 3.20
3290 3796 5.010719 AGAGTGAATTTTCTACACACGGAGA 59.989 40.000 0.00 0.00 37.05 3.71
3291 3797 5.230942 AGAGTGAATTTTCTACACACGGAG 58.769 41.667 0.00 0.00 37.05 4.63
3292 3798 5.209818 AGAGTGAATTTTCTACACACGGA 57.790 39.130 0.00 0.00 37.05 4.69
3293 3799 5.577164 CCTAGAGTGAATTTTCTACACACGG 59.423 44.000 0.00 0.00 37.05 4.94
3294 3800 5.062308 GCCTAGAGTGAATTTTCTACACACG 59.938 44.000 0.00 0.00 37.05 4.49
3295 3801 5.351740 GGCCTAGAGTGAATTTTCTACACAC 59.648 44.000 0.00 0.00 37.05 3.82
3296 3802 5.012664 TGGCCTAGAGTGAATTTTCTACACA 59.987 40.000 3.32 0.00 37.05 3.72
3297 3803 5.488341 TGGCCTAGAGTGAATTTTCTACAC 58.512 41.667 3.32 0.00 35.15 2.90
3298 3804 5.755409 TGGCCTAGAGTGAATTTTCTACA 57.245 39.130 3.32 0.00 0.00 2.74
3299 3805 7.631717 AATTGGCCTAGAGTGAATTTTCTAC 57.368 36.000 3.32 0.00 0.00 2.59
3300 3806 8.650143 AAAATTGGCCTAGAGTGAATTTTCTA 57.350 30.769 3.32 0.00 33.15 2.10
3301 3807 7.544804 AAAATTGGCCTAGAGTGAATTTTCT 57.455 32.000 3.32 0.00 33.15 2.52
3302 3808 9.140286 GTTAAAATTGGCCTAGAGTGAATTTTC 57.860 33.333 18.44 7.07 37.40 2.29
3303 3809 8.094548 GGTTAAAATTGGCCTAGAGTGAATTTT 58.905 33.333 18.74 18.74 38.84 1.82
3304 3810 7.576856 CGGTTAAAATTGGCCTAGAGTGAATTT 60.577 37.037 3.32 2.92 0.00 1.82
3305 3811 6.127730 CGGTTAAAATTGGCCTAGAGTGAATT 60.128 38.462 3.32 0.00 0.00 2.17
3306 3812 5.357032 CGGTTAAAATTGGCCTAGAGTGAAT 59.643 40.000 3.32 0.00 0.00 2.57
3307 3813 4.698304 CGGTTAAAATTGGCCTAGAGTGAA 59.302 41.667 3.32 0.00 0.00 3.18
3308 3814 4.258543 CGGTTAAAATTGGCCTAGAGTGA 58.741 43.478 3.32 0.00 0.00 3.41
3309 3815 3.181500 GCGGTTAAAATTGGCCTAGAGTG 60.181 47.826 3.32 0.00 0.00 3.51
3310 3816 3.014623 GCGGTTAAAATTGGCCTAGAGT 58.985 45.455 3.32 0.00 0.00 3.24
3311 3817 3.013921 TGCGGTTAAAATTGGCCTAGAG 58.986 45.455 3.32 0.00 0.00 2.43
3312 3818 2.750712 GTGCGGTTAAAATTGGCCTAGA 59.249 45.455 3.32 0.00 0.00 2.43
3313 3819 2.490115 TGTGCGGTTAAAATTGGCCTAG 59.510 45.455 3.32 0.00 0.00 3.02
3314 3820 2.515854 TGTGCGGTTAAAATTGGCCTA 58.484 42.857 3.32 0.00 0.00 3.93
3315 3821 1.333177 TGTGCGGTTAAAATTGGCCT 58.667 45.000 3.32 0.00 0.00 5.19
3316 3822 2.378445 ATGTGCGGTTAAAATTGGCC 57.622 45.000 0.00 0.00 0.00 5.36
3317 3823 3.801594 CCATATGTGCGGTTAAAATTGGC 59.198 43.478 1.24 0.00 0.00 4.52
3318 3824 4.367450 CCCATATGTGCGGTTAAAATTGG 58.633 43.478 1.24 0.00 0.00 3.16
3319 3825 3.801594 GCCCATATGTGCGGTTAAAATTG 59.198 43.478 1.24 0.00 0.00 2.32
3320 3826 3.704061 AGCCCATATGTGCGGTTAAAATT 59.296 39.130 4.44 0.00 0.00 1.82
3321 3827 3.068024 CAGCCCATATGTGCGGTTAAAAT 59.932 43.478 4.44 0.00 0.00 1.82
3332 4153 5.655394 TCCTCTAGTATTCAGCCCATATGT 58.345 41.667 1.24 0.00 0.00 2.29
3364 4185 4.532834 GCACCCCAGTCCATAAGAAAATA 58.467 43.478 0.00 0.00 0.00 1.40
3372 4193 1.695114 CCATCGCACCCCAGTCCATA 61.695 60.000 0.00 0.00 0.00 2.74
3384 4205 2.350895 CCAACCTGGTCCATCGCA 59.649 61.111 0.00 0.00 31.35 5.10
3408 4229 0.970640 TGTCTAGTGGCGGTGCTTTA 59.029 50.000 0.00 0.00 0.00 1.85
3409 4230 0.324943 ATGTCTAGTGGCGGTGCTTT 59.675 50.000 0.00 0.00 0.00 3.51
3432 4264 3.259064 CCCTACACCATTACAACACGAG 58.741 50.000 0.00 0.00 0.00 4.18
3443 4275 1.198759 ACGTCAAGCCCCTACACCAT 61.199 55.000 0.00 0.00 0.00 3.55
3444 4276 0.542467 TACGTCAAGCCCCTACACCA 60.542 55.000 0.00 0.00 0.00 4.17
3469 4301 5.054477 CGAAAGGGACAGAAAGTTGTAAGA 58.946 41.667 0.00 0.00 0.00 2.10
3472 4304 3.135994 GCGAAAGGGACAGAAAGTTGTA 58.864 45.455 0.00 0.00 0.00 2.41
3473 4305 1.947456 GCGAAAGGGACAGAAAGTTGT 59.053 47.619 0.00 0.00 0.00 3.32
3474 4306 2.222027 AGCGAAAGGGACAGAAAGTTG 58.778 47.619 0.00 0.00 0.00 3.16
3475 4307 2.104963 AGAGCGAAAGGGACAGAAAGTT 59.895 45.455 0.00 0.00 0.00 2.66
3511 4417 2.529780 AATTGTCACACGGTCGGTAA 57.470 45.000 0.00 0.00 0.00 2.85
3520 4426 5.621197 TGCATAGTACCAAATTGTCACAC 57.379 39.130 0.00 0.00 0.00 3.82
3536 4442 0.846015 TGTGGGGGAGGAATGCATAG 59.154 55.000 0.00 0.00 0.00 2.23
3568 4476 8.668510 TTTGTTTATGTATTGCATTTGTTGGT 57.331 26.923 0.00 0.00 38.94 3.67
3595 4504 7.981225 ACTTATCAAGAAAGCATTGTTGTGTTT 59.019 29.630 10.80 0.00 39.94 2.83
3608 4518 4.932200 AGGCGACTGAACTTATCAAGAAAG 59.068 41.667 0.00 0.00 41.13 2.62
3612 4522 4.245660 TCAAGGCGACTGAACTTATCAAG 58.754 43.478 0.00 0.00 42.68 3.02
3615 4525 3.557595 CCATCAAGGCGACTGAACTTATC 59.442 47.826 0.00 0.00 42.68 1.75
3668 4578 1.432023 AATTGTCCAACCCCTCCCGT 61.432 55.000 0.00 0.00 0.00 5.28
3673 4583 0.542702 CCTGCAATTGTCCAACCCCT 60.543 55.000 7.40 0.00 0.00 4.79
3700 4610 1.134965 AGAGAGCGTTATGTGGAGCAC 60.135 52.381 0.00 0.00 34.56 4.40
3755 4665 1.070758 GTTGAGTCTGGAGGAGTTGCA 59.929 52.381 0.00 0.00 0.00 4.08
3756 4666 1.346068 AGTTGAGTCTGGAGGAGTTGC 59.654 52.381 0.00 0.00 0.00 4.17
3758 4668 4.742012 TCTAAGTTGAGTCTGGAGGAGTT 58.258 43.478 0.00 0.00 0.00 3.01
3777 4687 0.397187 ATAGCTCCCGAGACGCTCTA 59.603 55.000 0.00 0.00 35.33 2.43
3947 4861 3.519510 TCTTTCTGGCAGCTATAGTGGTT 59.480 43.478 10.34 0.00 0.00 3.67
3955 4869 1.219124 CGGCTCTTTCTGGCAGCTA 59.781 57.895 10.34 0.00 33.38 3.32
3959 4873 2.359107 CAGCGGCTCTTTCTGGCA 60.359 61.111 0.00 0.00 0.00 4.92
4008 4922 3.141398 GTCATCAACAAGGTCAAGCAGA 58.859 45.455 0.00 0.00 0.00 4.26
4010 4924 2.929641 TGTCATCAACAAGGTCAAGCA 58.070 42.857 0.00 0.00 34.03 3.91
4057 4972 3.527434 CCAGGACGGTGGTTCTTAC 57.473 57.895 0.00 0.00 32.32 2.34
4076 4991 2.431771 CGACGACGGAATGTGGCA 60.432 61.111 0.00 0.00 35.72 4.92
4080 4995 0.856641 CAACAACGACGACGGAATGT 59.143 50.000 12.58 10.51 44.46 2.71
4083 4998 0.922717 GTTCAACAACGACGACGGAA 59.077 50.000 12.58 2.19 44.46 4.30
4084 4999 0.871163 GGTTCAACAACGACGACGGA 60.871 55.000 12.58 0.00 44.46 4.69
4085 5000 1.146957 TGGTTCAACAACGACGACGG 61.147 55.000 12.58 0.00 44.46 4.79
4086 5001 0.856641 ATGGTTCAACAACGACGACG 59.143 50.000 5.58 5.58 45.75 5.12
4095 5010 7.148188 GCTTCAGATCTATTCAATGGTTCAACA 60.148 37.037 0.00 0.00 0.00 3.33
4179 5094 1.621107 TCGACGTAGGTTTCAATCGC 58.379 50.000 0.00 0.00 0.00 4.58
4182 5097 3.251571 GAGCTTCGACGTAGGTTTCAAT 58.748 45.455 7.62 0.00 0.00 2.57
4183 5098 2.608752 GGAGCTTCGACGTAGGTTTCAA 60.609 50.000 7.62 0.00 0.00 2.69
4205 5120 4.771114 TTTCCATCCGGACATAGTTGAT 57.229 40.909 6.12 0.00 42.67 2.57
4218 5133 4.034285 TCCTCCTCAAGTTTTTCCATCC 57.966 45.455 0.00 0.00 0.00 3.51
4221 5136 4.350816 TCTGATCCTCCTCAAGTTTTTCCA 59.649 41.667 0.00 0.00 0.00 3.53
4250 5165 4.881850 TGCTTCCTCTTCGACTTTTTCTTT 59.118 37.500 0.00 0.00 0.00 2.52
4294 5209 5.585047 GGTTAGAACTATTTTGTCCTCGCAT 59.415 40.000 0.00 0.00 0.00 4.73
4317 5232 8.202811 GGAGTACTATAAAACCTCACCTTTAGG 58.797 40.741 0.00 0.00 40.20 2.69
4323 5238 5.070180 GGAGGGAGTACTATAAAACCTCACC 59.930 48.000 19.20 5.00 43.62 4.02
4324 5239 5.221204 CGGAGGGAGTACTATAAAACCTCAC 60.221 48.000 19.20 12.10 43.62 3.51
4325 5240 4.891756 CGGAGGGAGTACTATAAAACCTCA 59.108 45.833 19.20 0.00 43.62 3.86
4326 5241 4.892345 ACGGAGGGAGTACTATAAAACCTC 59.108 45.833 0.00 6.53 41.68 3.85
4327 5242 4.876580 ACGGAGGGAGTACTATAAAACCT 58.123 43.478 0.00 0.00 0.00 3.50
4330 5245 4.339247 CCGAACGGAGGGAGTACTATAAAA 59.661 45.833 7.53 0.00 37.50 1.52
4331 5246 3.885297 CCGAACGGAGGGAGTACTATAAA 59.115 47.826 7.53 0.00 37.50 1.40
4332 5247 3.136443 TCCGAACGGAGGGAGTACTATAA 59.864 47.826 12.04 0.00 39.76 0.98
4333 5248 2.705658 TCCGAACGGAGGGAGTACTATA 59.294 50.000 12.04 0.00 39.76 1.31
4335 5250 0.911769 TCCGAACGGAGGGAGTACTA 59.088 55.000 12.04 0.00 39.76 1.82
4336 5251 1.687612 TCCGAACGGAGGGAGTACT 59.312 57.895 12.04 0.00 39.76 2.73
4345 5260 2.439409 TGACAAGTATCTCCGAACGGA 58.561 47.619 15.13 15.13 42.90 4.69
4346 5261 2.933495 TGACAAGTATCTCCGAACGG 57.067 50.000 6.94 6.94 0.00 4.44
4347 5262 4.028852 TGATGACAAGTATCTCCGAACG 57.971 45.455 0.00 0.00 0.00 3.95
4349 5264 7.102993 TCATTTTGATGACAAGTATCTCCGAA 58.897 34.615 0.00 0.00 37.32 4.30
4351 5266 6.908870 TCATTTTGATGACAAGTATCTCCG 57.091 37.500 0.00 0.00 37.32 4.63
4358 5273 8.096414 CCCCTTTTATTCATTTTGATGACAAGT 58.904 33.333 0.00 0.00 37.32 3.16
4359 5274 8.313292 TCCCCTTTTATTCATTTTGATGACAAG 58.687 33.333 0.00 0.00 37.32 3.16
4360 5275 8.200024 TCCCCTTTTATTCATTTTGATGACAA 57.800 30.769 0.00 0.00 0.00 3.18
4361 5276 7.789202 TCCCCTTTTATTCATTTTGATGACA 57.211 32.000 0.00 0.00 0.00 3.58
4362 5277 8.260114 ACATCCCCTTTTATTCATTTTGATGAC 58.740 33.333 0.00 0.00 32.39 3.06
4366 5281 9.713684 AGATACATCCCCTTTTATTCATTTTGA 57.286 29.630 0.00 0.00 0.00 2.69
4403 5318 9.886132 GGACAAAAAGGAATGTATCTAGAACTA 57.114 33.333 0.00 0.00 0.00 2.24
4404 5319 8.383175 TGGACAAAAAGGAATGTATCTAGAACT 58.617 33.333 0.00 0.00 0.00 3.01
4407 5322 9.753674 AAATGGACAAAAAGGAATGTATCTAGA 57.246 29.630 0.00 0.00 0.00 2.43
4410 5325 8.869109 TCAAAATGGACAAAAAGGAATGTATCT 58.131 29.630 0.00 0.00 0.00 1.98
4412 5327 9.439500 CATCAAAATGGACAAAAAGGAATGTAT 57.561 29.630 0.00 0.00 0.00 2.29
4414 5329 7.442062 GTCATCAAAATGGACAAAAAGGAATGT 59.558 33.333 0.00 0.00 33.42 2.71
4415 5330 7.441760 TGTCATCAAAATGGACAAAAAGGAATG 59.558 33.333 0.00 0.00 33.42 2.67
4416 5331 7.507829 TGTCATCAAAATGGACAAAAAGGAAT 58.492 30.769 0.00 0.00 33.42 3.01
4417 5332 6.882656 TGTCATCAAAATGGACAAAAAGGAA 58.117 32.000 0.00 0.00 33.42 3.36
4418 5333 6.477053 TGTCATCAAAATGGACAAAAAGGA 57.523 33.333 0.00 0.00 33.42 3.36
4419 5334 6.762661 ACTTGTCATCAAAATGGACAAAAAGG 59.237 34.615 7.70 0.11 34.98 3.11
4420 5335 7.775397 ACTTGTCATCAAAATGGACAAAAAG 57.225 32.000 7.70 0.11 34.98 2.27
4421 5336 8.558973 AAACTTGTCATCAAAATGGACAAAAA 57.441 26.923 7.70 0.00 34.98 1.94
4422 5337 8.558973 AAAACTTGTCATCAAAATGGACAAAA 57.441 26.923 7.70 0.00 34.98 2.44
4445 5360 1.273327 GTACTCCCTCCGTCCGAAAAA 59.727 52.381 0.00 0.00 0.00 1.94
4446 5361 0.890683 GTACTCCCTCCGTCCGAAAA 59.109 55.000 0.00 0.00 0.00 2.29
4447 5362 0.038744 AGTACTCCCTCCGTCCGAAA 59.961 55.000 0.00 0.00 0.00 3.46
4448 5363 0.393537 GAGTACTCCCTCCGTCCGAA 60.394 60.000 12.13 0.00 0.00 4.30
4449 5364 1.222936 GAGTACTCCCTCCGTCCGA 59.777 63.158 12.13 0.00 0.00 4.55
4450 5365 2.178890 CGAGTACTCCCTCCGTCCG 61.179 68.421 17.23 0.00 0.00 4.79
4451 5366 2.479750 GCGAGTACTCCCTCCGTCC 61.480 68.421 17.23 0.00 0.00 4.79
4452 5367 2.479750 GGCGAGTACTCCCTCCGTC 61.480 68.421 17.23 3.45 0.00 4.79
4453 5368 2.439883 GGCGAGTACTCCCTCCGT 60.440 66.667 17.23 0.00 0.00 4.69
4454 5369 2.005960 CTTGGCGAGTACTCCCTCCG 62.006 65.000 23.01 12.52 0.00 4.63
4455 5370 1.677637 CCTTGGCGAGTACTCCCTCC 61.678 65.000 23.01 18.53 0.00 4.30
4456 5371 1.677637 CCCTTGGCGAGTACTCCCTC 61.678 65.000 23.01 12.51 0.00 4.30
4457 5372 1.686110 CCCTTGGCGAGTACTCCCT 60.686 63.158 23.01 0.00 0.00 4.20
4458 5373 1.049289 ATCCCTTGGCGAGTACTCCC 61.049 60.000 17.23 17.96 0.00 4.30
4459 5374 0.389757 GATCCCTTGGCGAGTACTCC 59.610 60.000 17.23 9.71 0.00 3.85
4460 5375 1.112113 TGATCCCTTGGCGAGTACTC 58.888 55.000 13.18 13.18 0.00 2.59
4461 5376 1.482593 CTTGATCCCTTGGCGAGTACT 59.517 52.381 0.00 0.00 0.00 2.73
4483 5398 1.334869 CTGCCCAGTTGTCTTTGTGTC 59.665 52.381 0.00 0.00 0.00 3.67
4489 5404 0.250640 CAGAGCTGCCCAGTTGTCTT 60.251 55.000 0.00 0.00 0.00 3.01
4491 5406 1.673665 CCAGAGCTGCCCAGTTGTC 60.674 63.158 0.00 0.00 0.00 3.18
4503 5418 4.819769 CTCCATCTTATCTAAGCCAGAGC 58.180 47.826 0.00 0.00 36.48 4.09
4504 5419 4.282957 TGCTCCATCTTATCTAAGCCAGAG 59.717 45.833 0.00 0.00 36.48 3.35
4505 5420 4.226384 TGCTCCATCTTATCTAAGCCAGA 58.774 43.478 0.00 0.00 37.79 3.86
4506 5421 4.613925 TGCTCCATCTTATCTAAGCCAG 57.386 45.455 0.00 0.00 33.40 4.85
4507 5422 4.019860 GGATGCTCCATCTTATCTAAGCCA 60.020 45.833 5.32 0.00 40.39 4.75
4508 5423 4.224818 AGGATGCTCCATCTTATCTAAGCC 59.775 45.833 5.32 0.00 40.39 4.35
4509 5424 5.418676 GAGGATGCTCCATCTTATCTAAGC 58.581 45.833 2.14 0.00 40.39 3.09
4510 5425 5.721000 AGGAGGATGCTCCATCTTATCTAAG 59.279 44.000 32.16 0.00 45.66 2.18
4511 5426 5.483231 CAGGAGGATGCTCCATCTTATCTAA 59.517 44.000 32.16 0.00 45.66 2.10
4548 5498 3.831333 TGGCAAGTTATCATCTTTGCCAA 59.169 39.130 23.02 10.12 41.30 4.52
4563 5513 1.251251 GTGGCTGAAGAATGGCAAGT 58.749 50.000 0.00 0.00 40.35 3.16
4576 5526 0.689623 AAGAGGAGAAGTGGTGGCTG 59.310 55.000 0.00 0.00 0.00 4.85
4577 5527 0.980423 GAAGAGGAGAAGTGGTGGCT 59.020 55.000 0.00 0.00 0.00 4.75
4592 5542 2.804697 TTCCGTCATGTCGTTGAAGA 57.195 45.000 11.29 0.00 0.00 2.87
4607 5557 1.819632 GCTGTGGGGCAGTATTCCG 60.820 63.158 0.00 0.00 46.64 4.30
4622 5572 5.296151 TGGGAACTCCATATAAGAAGCTG 57.704 43.478 0.00 0.00 41.46 4.24
4647 5597 2.554344 GGGAGTCAACCTTGCCAATGTA 60.554 50.000 0.00 0.00 0.00 2.29
4715 5668 2.038863 TCCCCACCTTCTTAGCTTCA 57.961 50.000 0.00 0.00 0.00 3.02
4740 7007 3.443681 GTGTCACCCACCAAATAGAATGG 59.556 47.826 0.00 0.00 43.84 3.16
4803 7070 1.826096 TGATGAATTGGTGCCATGGTG 59.174 47.619 14.67 0.00 0.00 4.17
4834 7101 4.022762 CACATTCAACCAAATTCGGTACCA 60.023 41.667 13.54 0.00 38.76 3.25
4871 7138 4.008074 TGAGGGAGATGAGTTTGACAAC 57.992 45.455 0.00 0.00 0.00 3.32
5014 7287 4.336280 GCCCTACCTTCACTTTGATCTTT 58.664 43.478 0.00 0.00 0.00 2.52
5113 7394 1.447317 GGTGTGCATCATAAGGCCCG 61.447 60.000 0.00 0.00 0.00 6.13
5200 7481 4.453478 GCTAGTTAAGGGGTTGTTACACAC 59.547 45.833 0.00 0.00 0.00 3.82
5225 7506 1.064758 TGAACTTTGTGGTGCCACTCT 60.065 47.619 20.46 2.71 46.30 3.24
5259 7540 1.854280 GGAGACTAGGAGAAGGGGAGA 59.146 57.143 0.00 0.00 0.00 3.71
5278 7753 1.272425 TGGTGGCTAATTTGTGGGAGG 60.272 52.381 0.00 0.00 0.00 4.30
5397 7872 9.116067 TCAAATACTCCTCGAAAAAGAAAAAGA 57.884 29.630 0.00 0.00 0.00 2.52
5398 7873 9.730420 TTCAAATACTCCTCGAAAAAGAAAAAG 57.270 29.630 0.00 0.00 0.00 2.27
5480 7955 8.700051 ACATAATAGTGAGCACTGAGAAATACT 58.300 33.333 13.12 0.00 42.52 2.12
5537 8012 3.827302 TCACACTACTCTCTTCCAAGGAC 59.173 47.826 0.00 0.00 0.00 3.85
5588 8063 5.764686 TGATGATTACATGTGAATGGCCTAC 59.235 40.000 9.11 0.00 36.82 3.18
5620 8095 5.126869 TGCAGAGAAAATGTTGAGAAACCAA 59.873 36.000 0.00 0.00 0.00 3.67
5641 8116 7.707624 AAGAGGACAATTAAATCAAGATGCA 57.292 32.000 0.00 0.00 0.00 3.96
5873 8351 2.093658 ACCTAACTCATGTCCGCGAAAT 60.094 45.455 8.23 0.00 0.00 2.17
5905 8383 6.040391 AGGAAAACAATAGCAAAGCACTACAA 59.960 34.615 0.00 0.00 0.00 2.41
5917 8395 8.107399 ACCTGTTACTAAAGGAAAACAATAGC 57.893 34.615 0.00 0.00 37.01 2.97
5934 8412 6.427242 GCTCTTTTAGGCCATATACCTGTTAC 59.573 42.308 5.01 0.00 38.26 2.50
6030 8508 9.649167 TTTTTAGAACCTATCTGTACTTAGTGC 57.351 33.333 0.00 0.00 39.30 4.40
6039 8517 9.588096 AAACCAGAATTTTTAGAACCTATCTGT 57.412 29.630 0.00 0.00 39.30 3.41
6101 8579 8.802267 ACCGAAAAGATTGGAATTTGAGAATTA 58.198 29.630 0.00 0.00 35.65 1.40
6121 8599 9.868277 AAATAATTATTTCAATGCTCACCGAAA 57.132 25.926 16.15 0.00 30.50 3.46
6243 8721 6.329496 TCGTTTTCTGCAAACTGAGAATTTT 58.671 32.000 1.73 0.00 42.51 1.82
6296 8774 8.154203 TCAACAGTTTTCTCATTGGTAGATGTA 58.846 33.333 0.00 0.00 0.00 2.29
6303 8781 3.953612 TGCTCAACAGTTTTCTCATTGGT 59.046 39.130 0.00 0.00 0.00 3.67
6477 8955 1.369839 GCTTCAAGGCCGTAGCTTCC 61.370 60.000 6.23 0.00 39.73 3.46
6532 9010 0.533531 CAGCAGGCAAGTCACTGTCA 60.534 55.000 0.00 0.00 37.07 3.58
6536 9014 1.072806 TGATTCAGCAGGCAAGTCACT 59.927 47.619 0.00 0.00 0.00 3.41
6644 9122 9.089601 CATGTGCATTCATATTGTGTACAATTT 57.910 29.630 14.69 5.36 43.48 1.82
6645 9123 7.223193 GCATGTGCATTCATATTGTGTACAATT 59.777 33.333 14.69 2.07 40.77 2.32
6646 9124 6.698329 GCATGTGCATTCATATTGTGTACAAT 59.302 34.615 14.03 14.03 40.77 2.71
6647 9125 6.035217 GCATGTGCATTCATATTGTGTACAA 58.965 36.000 0.00 0.00 40.77 2.41
6648 9126 5.580661 GCATGTGCATTCATATTGTGTACA 58.419 37.500 0.00 0.00 41.43 2.90
6764 9242 2.555757 CTGCTAGCTTGCCTTCTTTTGT 59.444 45.455 17.57 0.00 0.00 2.83
6859 9337 6.375455 GCCCAGAATTTTGAGAAACTAGATCA 59.625 38.462 0.00 0.00 0.00 2.92
7125 9614 5.523552 ACATACATAACCATCATGTCACGTG 59.476 40.000 9.94 9.94 37.74 4.49
7155 9644 4.867608 GTCAACAGCTTTCTCTCCTGTATC 59.132 45.833 0.00 0.00 38.77 2.24
7198 9687 1.376037 GCAGCGCCTTGTACTCCTT 60.376 57.895 2.29 0.00 0.00 3.36
7605 10151 4.008074 ACAACTCTCCACCAACACATAG 57.992 45.455 0.00 0.00 0.00 2.23
7648 10194 9.773421 ACGAAGTGCCAGTGTAACTAAACTCAT 62.773 40.741 0.00 0.00 45.44 2.90
7664 10210 6.946583 AGGAGTATCTAATATACGAAGTGCCA 59.053 38.462 0.00 0.00 36.70 4.92
7665 10211 7.393841 AGGAGTATCTAATATACGAAGTGCC 57.606 40.000 0.00 0.00 36.70 5.01
7672 10218 9.833917 TCCACAGATAGGAGTATCTAATATACG 57.166 37.037 0.00 0.00 43.13 3.06
7694 10365 0.966875 TTCTGGCATGCATGGTCCAC 60.967 55.000 27.34 10.53 0.00 4.02
7699 10370 1.140161 CCGTTTCTGGCATGCATGG 59.860 57.895 27.34 11.67 0.00 3.66
7700 10371 1.093972 TACCGTTTCTGGCATGCATG 58.906 50.000 22.70 22.70 0.00 4.06
7701 10372 1.677576 CATACCGTTTCTGGCATGCAT 59.322 47.619 21.36 0.00 0.00 3.96
7702 10373 1.093972 CATACCGTTTCTGGCATGCA 58.906 50.000 21.36 4.79 0.00 3.96
7703 10374 1.094785 ACATACCGTTTCTGGCATGC 58.905 50.000 9.90 9.90 36.40 4.06
7704 10375 2.159393 CCAACATACCGTTTCTGGCATG 60.159 50.000 0.00 0.00 38.51 4.06
7705 10376 2.091541 CCAACATACCGTTTCTGGCAT 58.908 47.619 0.00 0.00 34.86 4.40
7706 10377 1.072489 TCCAACATACCGTTTCTGGCA 59.928 47.619 0.00 0.00 34.86 4.92
7707 10378 1.816074 TCCAACATACCGTTTCTGGC 58.184 50.000 0.00 0.00 34.86 4.85
7708 10379 4.069304 TCTTTCCAACATACCGTTTCTGG 58.931 43.478 0.00 0.00 34.86 3.86
7711 10382 5.622770 ACATCTTTCCAACATACCGTTTC 57.377 39.130 0.00 0.00 34.86 2.78
7713 10384 6.469410 TCTAACATCTTTCCAACATACCGTT 58.531 36.000 0.00 0.00 38.83 4.44
7716 10387 8.336801 ACTTTCTAACATCTTTCCAACATACC 57.663 34.615 0.00 0.00 0.00 2.73
7740 10411 7.689400 GCTGCTTCATTTTGCAACATTAATTAC 59.311 33.333 0.00 0.00 38.81 1.89
7771 10442 7.112452 AGCTAAGATCCACAAAAACTGTTTT 57.888 32.000 12.50 12.50 35.47 2.43
7828 10499 6.252281 TCCGCAAAATTAATGATCAACGTAC 58.748 36.000 0.00 0.00 0.00 3.67
7829 10500 6.424176 TCCGCAAAATTAATGATCAACGTA 57.576 33.333 0.00 0.00 0.00 3.57
7830 10501 5.303747 TCCGCAAAATTAATGATCAACGT 57.696 34.783 0.00 0.00 0.00 3.99
7831 10502 5.970612 TGATCCGCAAAATTAATGATCAACG 59.029 36.000 0.00 1.74 36.58 4.10
7863 10534 0.603569 CTGTCAACCTAGACGCACCT 59.396 55.000 0.00 0.00 41.41 4.00
7887 10578 2.200373 TTTAGGAAGGTGCTTGAGGC 57.800 50.000 0.00 0.00 42.22 4.70
7897 10588 1.202940 GGGCCAGCCTATTTAGGAAGG 60.203 57.143 4.39 8.71 46.63 3.46
7920 10611 2.428530 TGACCGATCTCTCATTCCTGTG 59.571 50.000 0.00 0.00 0.00 3.66
7952 10643 0.385390 CTGCAAAAAGGGAACACGCT 59.615 50.000 0.00 0.00 0.00 5.07
7963 10654 2.032799 CAGTAGTTGACGCCTGCAAAAA 59.967 45.455 0.00 0.00 0.00 1.94
8027 10718 0.902531 CAGGGGTGAACGATGTAGGT 59.097 55.000 0.00 0.00 0.00 3.08
8052 10743 2.203015 CCACACTATTCGGCCGGG 60.203 66.667 27.83 12.25 0.00 5.73
8280 10979 8.578308 AATGTCCGCATGATTAAAAATATGTG 57.422 30.769 0.00 0.00 35.15 3.21
8295 10994 1.832883 TGGCAGTTAAATGTCCGCAT 58.167 45.000 4.90 0.00 36.80 4.73
8309 11011 3.853671 GCGTCTTACAAAAATCATGGCAG 59.146 43.478 0.00 0.00 0.00 4.85
8325 11027 3.840890 TTTGTTTGTGAACTGCGTCTT 57.159 38.095 0.00 0.00 36.70 3.01
8326 11028 3.840890 TTTTGTTTGTGAACTGCGTCT 57.159 38.095 0.00 0.00 36.70 4.18
8327 11029 4.798387 AGATTTTTGTTTGTGAACTGCGTC 59.202 37.500 0.00 0.00 36.70 5.19
8328 11030 4.743493 AGATTTTTGTTTGTGAACTGCGT 58.257 34.783 0.00 0.00 36.70 5.24
8329 11031 6.472163 ACTTAGATTTTTGTTTGTGAACTGCG 59.528 34.615 0.00 0.00 36.70 5.18
8330 11032 7.755582 ACTTAGATTTTTGTTTGTGAACTGC 57.244 32.000 0.00 0.00 36.70 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.