Multiple sequence alignment - TraesCS6A01G008800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G008800 chr6A 100.000 4456 0 0 1 4456 3689332 3693787 0.000000e+00 8229.0
1 TraesCS6A01G008800 chr6A 94.792 192 10 0 4184 4375 3698510 3698701 2.610000e-77 300.0
2 TraesCS6A01G008800 chr6A 93.407 91 3 3 274 364 1816390 1816303 1.010000e-26 132.0
3 TraesCS6A01G008800 chr6B 91.054 3633 153 69 1 3556 9098848 9095311 0.000000e+00 4750.0
4 TraesCS6A01G008800 chr6B 93.229 576 34 3 3557 4128 9095229 9094655 0.000000e+00 843.0
5 TraesCS6A01G008800 chr6B 85.714 336 29 12 125 457 196481389 196481708 1.990000e-88 337.0
6 TraesCS6A01G008800 chr6B 85.417 336 30 11 125 457 375644334 375644015 9.240000e-87 331.0
7 TraesCS6A01G008800 chr6B 85.417 336 30 12 125 457 393068877 393069196 9.240000e-87 331.0
8 TraesCS6A01G008800 chr6B 84.000 150 20 3 799 948 680478 680623 1.670000e-29 141.0
9 TraesCS6A01G008800 chr6D 94.259 2961 85 31 1 2909 3819437 3816510 0.000000e+00 4447.0
10 TraesCS6A01G008800 chr6D 90.125 1357 79 28 2653 4002 3813614 3812306 0.000000e+00 1712.0
11 TraesCS6A01G008800 chr6D 88.108 925 77 17 3210 4128 3816297 3815400 0.000000e+00 1068.0
12 TraesCS6A01G008800 chr6D 82.733 666 76 27 160 812 2834643 2834004 1.400000e-154 556.0
13 TraesCS6A01G008800 chr6D 93.981 216 9 3 2929 3144 3816525 3816314 1.550000e-84 324.0
14 TraesCS6A01G008800 chr6D 84.109 258 31 5 4200 4456 169187505 169187257 1.600000e-59 241.0
15 TraesCS6A01G008800 chr4D 94.256 1532 63 9 1056 2571 266757768 266756246 0.000000e+00 2318.0
16 TraesCS6A01G008800 chr5D 95.141 1379 46 7 1205 2571 30064178 30062809 0.000000e+00 2156.0
17 TraesCS6A01G008800 chr5D 86.842 76 7 3 4113 4185 554823108 554823183 1.030000e-11 82.4
18 TraesCS6A01G008800 chr4A 91.697 277 15 4 4186 4455 586705900 586705625 1.170000e-100 377.0
19 TraesCS6A01G008800 chr4A 80.000 170 34 0 1837 2006 728064909 728064740 4.680000e-25 126.0
20 TraesCS6A01G008800 chr7B 91.336 277 18 4 4186 4456 714074827 714075103 1.510000e-99 374.0
21 TraesCS6A01G008800 chr7B 91.039 279 17 3 4185 4456 27294304 27294581 1.960000e-98 370.0
22 TraesCS6A01G008800 chr7B 93.846 65 2 2 4116 4180 277651638 277651700 3.670000e-16 97.1
23 TraesCS6A01G008800 chr5A 91.007 278 17 4 4185 4455 81498288 81498012 7.040000e-98 368.0
24 TraesCS6A01G008800 chr3B 90.288 278 16 4 4186 4456 772375149 772374876 1.970000e-93 353.0
25 TraesCS6A01G008800 chr3B 83.895 267 23 19 4201 4456 824000598 824000855 2.070000e-58 237.0
26 TraesCS6A01G008800 chrUn 94.792 192 10 0 4184 4375 231619304 231619495 2.610000e-77 300.0
27 TraesCS6A01G008800 chr2B 85.398 226 16 9 125 349 706089537 706089746 7.500000e-53 219.0
28 TraesCS6A01G008800 chr7D 92.000 75 6 0 4111 4185 540860161 540860235 6.100000e-19 106.0
29 TraesCS6A01G008800 chr7A 94.118 68 3 1 4119 4185 34048587 34048520 7.890000e-18 102.0
30 TraesCS6A01G008800 chr7A 91.429 70 2 4 4116 4183 354431447 354431380 4.750000e-15 93.5
31 TraesCS6A01G008800 chr7A 93.651 63 3 1 4123 4185 539543642 539543703 4.750000e-15 93.5
32 TraesCS6A01G008800 chr7A 90.476 63 6 0 2072 2134 9752278 9752340 2.860000e-12 84.2
33 TraesCS6A01G008800 chr2D 92.647 68 4 1 4118 4185 635993587 635993653 3.670000e-16 97.1
34 TraesCS6A01G008800 chr1A 91.304 69 4 2 4119 4185 560436349 560436281 4.750000e-15 93.5
35 TraesCS6A01G008800 chr3A 93.443 61 3 1 4123 4183 64340834 64340775 6.140000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G008800 chr6A 3689332 3693787 4455 False 8229.00 8229 100.00000 1 4456 1 chr6A.!!$F1 4455
1 TraesCS6A01G008800 chr6B 9094655 9098848 4193 True 2796.50 4750 92.14150 1 4128 2 chr6B.!!$R2 4127
2 TraesCS6A01G008800 chr6D 3812306 3819437 7131 True 1887.75 4447 91.61825 1 4128 4 chr6D.!!$R3 4127
3 TraesCS6A01G008800 chr6D 2834004 2834643 639 True 556.00 556 82.73300 160 812 1 chr6D.!!$R1 652
4 TraesCS6A01G008800 chr4D 266756246 266757768 1522 True 2318.00 2318 94.25600 1056 2571 1 chr4D.!!$R1 1515
5 TraesCS6A01G008800 chr5D 30062809 30064178 1369 True 2156.00 2156 95.14100 1205 2571 1 chr5D.!!$R1 1366

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
369 374 0.542805 TACGTGGGAAGGTATTGGCC 59.457 55.0 0.00 0.00 0.00 5.36 F
2066 2148 0.097674 CTGAAACTGCATAGCGCCAC 59.902 55.0 2.29 0.00 41.33 5.01 F
2890 2995 0.179040 ACCCAAAGTACGTGGTGGTG 60.179 55.0 15.11 5.01 34.01 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2299 2385 0.108804 TGAGCGTTCCGGTGATCTTC 60.109 55.0 0.00 0.0 37.83 2.87 R
3296 3402 0.100861 TGCACGCCGATGTAACGATA 59.899 50.0 0.00 0.0 35.09 2.92 R
3990 4188 0.107508 TGCATAGCTCAGCCTCAACC 60.108 55.0 7.73 0.0 0.00 3.77 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
71 73 5.532557 TCATGGCTCTGATAGTTATGAACG 58.467 41.667 0.00 0.00 36.23 3.95
114 116 2.669878 GCCTTGATCTGGGGCAAAA 58.330 52.632 15.59 0.00 44.69 2.44
115 117 0.975887 GCCTTGATCTGGGGCAAAAA 59.024 50.000 15.59 0.00 44.69 1.94
195 198 5.560183 GCGTAAGTACACTGAAACTTTGCAT 60.560 40.000 0.00 0.00 37.19 3.96
369 374 0.542805 TACGTGGGAAGGTATTGGCC 59.457 55.000 0.00 0.00 0.00 5.36
422 430 7.275888 TGACAGAGAAATGTGCAAAATAAGT 57.724 32.000 0.00 0.00 32.25 2.24
680 707 5.645929 ACGGACTAACAATTGACATATTGCA 59.354 36.000 13.59 0.00 38.74 4.08
784 812 7.384932 ACACTTTTGTTTCTCTTTTTGTCCTTG 59.615 33.333 0.00 0.00 28.43 3.61
940 968 5.437060 TGTGAAGTATAGAAAGGGCATTCC 58.563 41.667 0.00 0.00 0.00 3.01
1184 1214 2.612471 CCGCCTTCATTGGAATGCAAAA 60.612 45.455 0.00 0.00 42.61 2.44
1192 1222 4.527816 TCATTGGAATGCAAAAACTAGCCT 59.472 37.500 0.00 0.00 36.36 4.58
1227 1257 0.250467 AATGACAGTTGCGCAGGAGT 60.250 50.000 11.31 10.47 0.00 3.85
1415 1460 8.622948 AGTTTTCTTTATGTTAGGAAGTGAGG 57.377 34.615 0.00 0.00 0.00 3.86
1468 1513 0.389166 CAGTCTCAGTGCTTCCGTCC 60.389 60.000 0.00 0.00 0.00 4.79
1655 1702 4.913335 ACGAGTAAGTTGTCACAAGAGA 57.087 40.909 0.00 0.00 0.00 3.10
1772 1819 7.125659 TGAGTAGCATTGCAGGGCTATATATAA 59.874 37.037 20.05 0.56 43.78 0.98
1773 1820 8.038862 AGTAGCATTGCAGGGCTATATATAAT 57.961 34.615 20.05 0.68 43.78 1.28
1774 1821 8.153550 AGTAGCATTGCAGGGCTATATATAATC 58.846 37.037 20.05 8.40 43.78 1.75
2066 2148 0.097674 CTGAAACTGCATAGCGCCAC 59.902 55.000 2.29 0.00 41.33 5.01
2068 2150 1.358725 GAAACTGCATAGCGCCACGA 61.359 55.000 2.29 0.00 41.33 4.35
2115 2201 1.211457 GCTCACATTGGAGATCCTGGT 59.789 52.381 0.00 0.00 37.05 4.00
2200 2286 1.228033 GTACACCACCGCCACCTTT 60.228 57.895 0.00 0.00 0.00 3.11
2203 2289 4.204028 ACCACCGCCACCTTTGCT 62.204 61.111 0.00 0.00 0.00 3.91
2506 2607 0.539051 GCTTCTCCTTCTGGCTGCTA 59.461 55.000 0.00 0.00 0.00 3.49
2538 2639 0.974383 CTGACCAAGAAGTACCCGGT 59.026 55.000 0.00 0.00 0.00 5.28
2548 2649 1.964552 AGTACCCGGTCATCTACTCG 58.035 55.000 0.00 0.00 0.00 4.18
2550 2651 2.092753 AGTACCCGGTCATCTACTCGAA 60.093 50.000 0.00 0.00 0.00 3.71
2717 2822 6.692486 TCTTCTTCATCTCCTTGACTTGTAC 58.308 40.000 0.00 0.00 0.00 2.90
2718 2823 5.060662 TCTTCATCTCCTTGACTTGTACG 57.939 43.478 0.00 0.00 0.00 3.67
2719 2824 4.523173 TCTTCATCTCCTTGACTTGTACGT 59.477 41.667 0.00 0.00 0.00 3.57
2720 2825 5.708697 TCTTCATCTCCTTGACTTGTACGTA 59.291 40.000 0.00 0.00 0.00 3.57
2751 2856 5.357032 TCACAAAGAGAAGAAAACAGGAACC 59.643 40.000 0.00 0.00 0.00 3.62
2752 2857 5.125417 CACAAAGAGAAGAAAACAGGAACCA 59.875 40.000 0.00 0.00 0.00 3.67
2820 2925 7.640597 TTATCTTGCAGCTAACACTAGTCTA 57.359 36.000 0.00 0.00 0.00 2.59
2821 2926 6.723298 ATCTTGCAGCTAACACTAGTCTAT 57.277 37.500 0.00 0.00 0.00 1.98
2822 2927 7.825331 ATCTTGCAGCTAACACTAGTCTATA 57.175 36.000 0.00 0.00 0.00 1.31
2850 2955 3.328382 TCAATACACGCCAGCTACTTT 57.672 42.857 0.00 0.00 0.00 2.66
2874 2979 3.194755 ACCAACTTGAACAACTGAAACCC 59.805 43.478 0.00 0.00 0.00 4.11
2878 2983 5.072040 ACTTGAACAACTGAAACCCAAAG 57.928 39.130 0.00 0.00 0.00 2.77
2881 2986 5.570234 TGAACAACTGAAACCCAAAGTAC 57.430 39.130 0.00 0.00 0.00 2.73
2882 2987 4.095185 TGAACAACTGAAACCCAAAGTACG 59.905 41.667 0.00 0.00 0.00 3.67
2885 2990 2.567985 ACTGAAACCCAAAGTACGTGG 58.432 47.619 10.76 10.76 35.77 4.94
2886 2991 2.092807 ACTGAAACCCAAAGTACGTGGT 60.093 45.455 15.11 5.59 34.01 4.16
2887 2992 2.289547 CTGAAACCCAAAGTACGTGGTG 59.710 50.000 15.11 10.18 34.01 4.17
2888 2993 1.605232 GAAACCCAAAGTACGTGGTGG 59.395 52.381 15.11 5.43 34.01 4.61
2889 2994 0.547553 AACCCAAAGTACGTGGTGGT 59.452 50.000 15.11 4.67 34.01 4.16
2890 2995 0.179040 ACCCAAAGTACGTGGTGGTG 60.179 55.000 15.11 5.01 34.01 4.17
2893 2998 2.290464 CCAAAGTACGTGGTGGTGAAA 58.710 47.619 0.00 0.00 0.00 2.69
2895 3000 3.316868 CCAAAGTACGTGGTGGTGAAAAT 59.683 43.478 0.00 0.00 0.00 1.82
2896 3001 4.515944 CCAAAGTACGTGGTGGTGAAAATA 59.484 41.667 0.00 0.00 0.00 1.40
2898 3003 6.294286 CCAAAGTACGTGGTGGTGAAAATAAT 60.294 38.462 0.00 0.00 0.00 1.28
2899 3004 7.094720 CCAAAGTACGTGGTGGTGAAAATAATA 60.095 37.037 0.00 0.00 0.00 0.98
2901 3006 8.570068 AAGTACGTGGTGGTGAAAATAATAAT 57.430 30.769 0.00 0.00 0.00 1.28
2903 3008 9.321562 AGTACGTGGTGGTGAAAATAATAATAG 57.678 33.333 0.00 0.00 0.00 1.73
2904 3009 9.316730 GTACGTGGTGGTGAAAATAATAATAGA 57.683 33.333 0.00 0.00 0.00 1.98
2905 3010 8.974060 ACGTGGTGGTGAAAATAATAATAGAT 57.026 30.769 0.00 0.00 0.00 1.98
3071 3176 4.989277 TGCAGATTATGGTAGCCATCATT 58.011 39.130 3.67 0.00 40.74 2.57
3158 3263 0.779997 ATGCCTCCCTGTCCTTTTGT 59.220 50.000 0.00 0.00 0.00 2.83
3173 3278 6.088824 GTCCTTTTGTGATGATCATTGTCAC 58.911 40.000 17.37 17.37 41.90 3.67
3213 3318 3.132925 ACATTGTTGCCAACTGAATTGC 58.867 40.909 9.30 0.00 36.93 3.56
3215 3320 2.512485 TGTTGCCAACTGAATTGCTG 57.488 45.000 9.30 0.00 36.93 4.41
3268 3374 2.029739 TCCGCAGTCGAGTTGTAATGAA 60.030 45.455 0.00 0.00 38.10 2.57
3271 3377 4.142902 CCGCAGTCGAGTTGTAATGAAAAT 60.143 41.667 0.00 0.00 38.10 1.82
3272 3378 5.382303 CGCAGTCGAGTTGTAATGAAAATT 58.618 37.500 0.00 0.00 38.10 1.82
3274 3380 7.012943 CGCAGTCGAGTTGTAATGAAAATTTA 58.987 34.615 0.00 0.00 38.10 1.40
3275 3381 7.692291 CGCAGTCGAGTTGTAATGAAAATTTAT 59.308 33.333 0.00 0.00 38.10 1.40
3276 3382 9.982291 GCAGTCGAGTTGTAATGAAAATTTATA 57.018 29.630 0.00 0.00 0.00 0.98
3301 3407 8.083462 ACATATTTATGCGTGTTGATTATCGT 57.917 30.769 0.00 0.00 37.19 3.73
3302 3408 8.556194 ACATATTTATGCGTGTTGATTATCGTT 58.444 29.630 0.00 0.00 37.19 3.85
3436 3542 0.507358 GACAAGCAAGTCGACGAACC 59.493 55.000 10.46 0.14 0.00 3.62
3456 3562 2.375766 GCTGACGACAAGCCGTGAG 61.376 63.158 0.00 0.00 44.51 3.51
3461 3567 1.734477 CGACAAGCCGTGAGACTGG 60.734 63.158 0.00 0.00 0.00 4.00
3465 3571 0.534412 CAAGCCGTGAGACTGGAGAT 59.466 55.000 0.00 0.00 0.00 2.75
3480 3590 4.292306 ACTGGAGATTACACCCTTGGATTT 59.708 41.667 0.00 0.00 0.00 2.17
3481 3591 5.222337 ACTGGAGATTACACCCTTGGATTTT 60.222 40.000 0.00 0.00 0.00 1.82
3482 3592 6.011981 ACTGGAGATTACACCCTTGGATTTTA 60.012 38.462 0.00 0.00 0.00 1.52
3484 3594 7.418378 TGGAGATTACACCCTTGGATTTTATT 58.582 34.615 0.00 0.00 0.00 1.40
3486 3596 8.847196 GGAGATTACACCCTTGGATTTTATTAC 58.153 37.037 0.00 0.00 0.00 1.89
3643 3837 6.995091 GTGGGATTTAGTAAATGAGCAGAGAT 59.005 38.462 12.86 0.00 0.00 2.75
3674 3870 2.205022 TACAGCTGCCAATGCTCTTT 57.795 45.000 15.27 0.00 38.92 2.52
3692 3888 2.936919 TTGGTAGCTGCATATGGGAG 57.063 50.000 3.61 0.00 38.13 4.30
3720 3916 2.237751 CGATCACGGGTCGAATGGC 61.238 63.158 3.97 0.00 41.40 4.40
3790 3986 2.825532 AGTACCGATGCCTTGCAATTTT 59.174 40.909 0.00 0.00 43.62 1.82
3825 4021 3.062099 TCGAAAAATTCTCGGCGATCTTG 59.938 43.478 11.27 0.00 36.93 3.02
3961 4159 9.976511 TGAATAAGAAACATATTCTACCGTAGG 57.023 33.333 5.72 0.00 45.13 3.18
3990 4188 1.585267 TATTGTGCTTGTGCTGGCGG 61.585 55.000 0.00 0.00 40.48 6.13
4065 4263 6.431198 TCACAGTCAAAGTACACTTTTTCC 57.569 37.500 4.61 0.00 43.07 3.13
4070 4268 8.044908 ACAGTCAAAGTACACTTTTTCCTCTTA 58.955 33.333 4.61 0.00 43.07 2.10
4072 4270 9.057089 AGTCAAAGTACACTTTTTCCTCTTATG 57.943 33.333 4.61 0.00 43.07 1.90
4142 4342 8.935614 AATAATATTTAGGGTTTGTCTAGGGC 57.064 34.615 0.00 0.00 0.00 5.19
4143 4343 5.987019 ATATTTAGGGTTTGTCTAGGGCA 57.013 39.130 0.00 0.00 0.00 5.36
4144 4344 3.428413 TTTAGGGTTTGTCTAGGGCAC 57.572 47.619 0.00 0.00 0.00 5.01
4145 4345 2.032965 TAGGGTTTGTCTAGGGCACA 57.967 50.000 0.00 0.00 0.00 4.57
4148 4348 1.282157 GGGTTTGTCTAGGGCACATCT 59.718 52.381 0.00 0.00 0.00 2.90
4149 4349 2.504175 GGGTTTGTCTAGGGCACATCTA 59.496 50.000 0.00 0.00 0.00 1.98
4150 4350 3.432326 GGGTTTGTCTAGGGCACATCTAG 60.432 52.174 0.00 0.00 36.46 2.43
4151 4351 3.451178 GGTTTGTCTAGGGCACATCTAGA 59.549 47.826 0.00 0.00 40.38 2.43
4168 4368 7.881643 CATCTAGATGTGTCCTAGTTATTGC 57.118 40.000 22.42 0.00 36.06 3.56
4169 4369 7.436933 CATCTAGATGTGTCCTAGTTATTGCA 58.563 38.462 22.42 0.00 36.06 4.08
4170 4370 6.806751 TCTAGATGTGTCCTAGTTATTGCAC 58.193 40.000 0.00 0.00 36.06 4.57
4171 4371 5.420725 AGATGTGTCCTAGTTATTGCACA 57.579 39.130 0.00 0.00 40.42 4.57
4172 4372 5.994250 AGATGTGTCCTAGTTATTGCACAT 58.006 37.500 7.56 7.56 46.19 3.21
4174 4374 5.420725 TGTGTCCTAGTTATTGCACATCT 57.579 39.130 0.00 0.00 32.79 2.90
4176 4376 6.941857 TGTGTCCTAGTTATTGCACATCTAA 58.058 36.000 0.00 0.00 32.79 2.10
4179 4379 7.010552 GTGTCCTAGTTATTGCACATCTAAGTG 59.989 40.741 0.00 0.00 42.37 3.16
4181 4381 5.237344 CCTAGTTATTGCACATCTAAGTGGC 59.763 44.000 0.00 0.00 39.87 5.01
4183 4383 4.878397 AGTTATTGCACATCTAAGTGGCTC 59.122 41.667 0.00 0.00 39.87 4.70
4185 4385 3.354948 TTGCACATCTAAGTGGCTCAT 57.645 42.857 0.00 0.00 39.87 2.90
4186 4386 4.486125 TTGCACATCTAAGTGGCTCATA 57.514 40.909 0.00 0.00 39.87 2.15
4189 4389 6.173427 TGCACATCTAAGTGGCTCATATTA 57.827 37.500 0.00 0.00 39.87 0.98
4190 4390 6.226052 TGCACATCTAAGTGGCTCATATTAG 58.774 40.000 0.00 0.00 39.87 1.73
4191 4391 6.041979 TGCACATCTAAGTGGCTCATATTAGA 59.958 38.462 11.54 11.54 39.87 2.10
4192 4392 7.102346 GCACATCTAAGTGGCTCATATTAGAT 58.898 38.462 13.65 13.65 42.75 1.98
4193 4393 7.605691 GCACATCTAAGTGGCTCATATTAGATT 59.394 37.037 15.26 9.48 41.01 2.40
4195 4395 9.499479 ACATCTAAGTGGCTCATATTAGATTTG 57.501 33.333 15.26 12.15 41.01 2.32
4196 4396 9.716531 CATCTAAGTGGCTCATATTAGATTTGA 57.283 33.333 15.26 0.00 41.01 2.69
4201 4401 8.985315 AGTGGCTCATATTAGATTTGATTGAA 57.015 30.769 0.00 0.00 0.00 2.69
4202 4402 9.064706 AGTGGCTCATATTAGATTTGATTGAAG 57.935 33.333 0.00 0.00 0.00 3.02
4204 4404 7.020010 GGCTCATATTAGATTTGATTGAAGCG 58.980 38.462 0.00 0.00 0.00 4.68
4206 4406 8.072567 GCTCATATTAGATTTGATTGAAGCGTT 58.927 33.333 0.00 0.00 0.00 4.84
4207 4407 9.591404 CTCATATTAGATTTGATTGAAGCGTTC 57.409 33.333 0.00 0.00 0.00 3.95
4208 4408 8.559536 TCATATTAGATTTGATTGAAGCGTTCC 58.440 33.333 0.00 0.00 0.00 3.62
4209 4409 8.562892 CATATTAGATTTGATTGAAGCGTTCCT 58.437 33.333 0.00 0.00 0.00 3.36
4210 4410 9.778741 ATATTAGATTTGATTGAAGCGTTCCTA 57.221 29.630 0.00 0.00 0.00 2.94
4214 4414 4.537135 TTGATTGAAGCGTTCCTACTCT 57.463 40.909 0.00 0.00 0.00 3.24
4215 4415 4.111375 TGATTGAAGCGTTCCTACTCTC 57.889 45.455 0.00 0.00 0.00 3.20
4216 4416 3.119101 TGATTGAAGCGTTCCTACTCTCC 60.119 47.826 0.00 0.00 0.00 3.71
4218 4418 1.819288 TGAAGCGTTCCTACTCTCCTG 59.181 52.381 0.00 0.00 0.00 3.86
4219 4419 2.093106 GAAGCGTTCCTACTCTCCTGA 58.907 52.381 0.00 0.00 0.00 3.86
4220 4420 2.217510 AGCGTTCCTACTCTCCTGAA 57.782 50.000 0.00 0.00 0.00 3.02
4221 4421 2.096248 AGCGTTCCTACTCTCCTGAAG 58.904 52.381 0.00 0.00 0.00 3.02
4222 4422 1.135333 GCGTTCCTACTCTCCTGAAGG 59.865 57.143 0.00 0.00 0.00 3.46
4231 4431 3.700109 TCCTGAAGGAGAGCCGTG 58.300 61.111 0.00 0.00 39.78 4.94
4232 4432 1.984570 TCCTGAAGGAGAGCCGTGG 60.985 63.158 0.00 0.00 39.78 4.94
4233 4433 2.125350 CTGAAGGAGAGCCGTGGC 60.125 66.667 1.67 1.67 39.96 5.01
4248 4448 5.432885 GCCGTGGCTGTTTATTTATATGT 57.567 39.130 2.98 0.00 38.26 2.29
4249 4449 5.827666 GCCGTGGCTGTTTATTTATATGTT 58.172 37.500 2.98 0.00 38.26 2.71
4250 4450 5.685511 GCCGTGGCTGTTTATTTATATGTTG 59.314 40.000 2.98 0.00 38.26 3.33
4251 4451 6.205784 CCGTGGCTGTTTATTTATATGTTGG 58.794 40.000 0.00 0.00 0.00 3.77
4252 4452 5.685511 CGTGGCTGTTTATTTATATGTTGGC 59.314 40.000 0.00 0.00 0.00 4.52
4253 4453 6.568869 GTGGCTGTTTATTTATATGTTGGCA 58.431 36.000 0.00 0.00 0.00 4.92
4254 4454 7.038659 GTGGCTGTTTATTTATATGTTGGCAA 58.961 34.615 0.00 0.00 0.00 4.52
4255 4455 7.547370 GTGGCTGTTTATTTATATGTTGGCAAA 59.453 33.333 0.00 0.00 0.00 3.68
4256 4456 8.097038 TGGCTGTTTATTTATATGTTGGCAAAA 58.903 29.630 0.00 0.00 0.00 2.44
4257 4457 8.387354 GGCTGTTTATTTATATGTTGGCAAAAC 58.613 33.333 0.00 0.00 0.00 2.43
4258 4458 8.930760 GCTGTTTATTTATATGTTGGCAAAACA 58.069 29.630 0.00 4.10 34.31 2.83
4260 4460 9.209175 TGTTTATTTATATGTTGGCAAAACACC 57.791 29.630 0.00 0.00 31.47 4.16
4263 4463 7.903995 ATTTATATGTTGGCAAAACACCTTG 57.096 32.000 0.00 0.00 32.37 3.61
4265 4465 2.663826 TGTTGGCAAAACACCTTGAC 57.336 45.000 0.00 0.00 34.66 3.18
4266 4466 1.135257 TGTTGGCAAAACACCTTGACG 60.135 47.619 0.00 0.00 37.11 4.35
4267 4467 0.457851 TTGGCAAAACACCTTGACGG 59.542 50.000 0.00 0.00 37.11 4.79
4268 4468 1.362355 GGCAAAACACCTTGACGGG 59.638 57.895 0.00 0.00 36.97 5.28
4269 4469 1.104577 GGCAAAACACCTTGACGGGA 61.105 55.000 0.00 0.00 36.97 5.14
4270 4470 0.310854 GCAAAACACCTTGACGGGAG 59.689 55.000 0.00 0.00 36.97 4.30
4273 4473 1.426751 AAACACCTTGACGGGAGGTA 58.573 50.000 6.35 0.00 45.58 3.08
4274 4474 0.683412 AACACCTTGACGGGAGGTAC 59.317 55.000 6.35 0.00 45.58 3.34
4275 4475 0.470456 ACACCTTGACGGGAGGTACA 60.470 55.000 6.35 0.00 45.58 2.90
4277 4477 0.974383 ACCTTGACGGGAGGTACAAG 59.026 55.000 5.00 0.00 45.50 3.16
4281 4481 2.297698 TGACGGGAGGTACAAGAGAA 57.702 50.000 0.00 0.00 0.00 2.87
4282 4482 2.168496 TGACGGGAGGTACAAGAGAAG 58.832 52.381 0.00 0.00 0.00 2.85
4283 4483 1.477295 GACGGGAGGTACAAGAGAAGG 59.523 57.143 0.00 0.00 0.00 3.46
4287 4938 3.958798 CGGGAGGTACAAGAGAAGGATTA 59.041 47.826 0.00 0.00 0.00 1.75
4288 4939 4.038162 CGGGAGGTACAAGAGAAGGATTAG 59.962 50.000 0.00 0.00 0.00 1.73
4289 4940 4.345547 GGGAGGTACAAGAGAAGGATTAGG 59.654 50.000 0.00 0.00 0.00 2.69
4292 4943 6.327887 GGAGGTACAAGAGAAGGATTAGGAAT 59.672 42.308 0.00 0.00 0.00 3.01
4294 4945 6.903534 AGGTACAAGAGAAGGATTAGGAATCA 59.096 38.462 0.00 0.00 39.71 2.57
4296 4947 7.659390 GGTACAAGAGAAGGATTAGGAATCATG 59.341 40.741 0.00 0.00 39.71 3.07
4299 4950 8.112183 ACAAGAGAAGGATTAGGAATCATGTTT 58.888 33.333 0.00 0.00 39.71 2.83
4300 4951 8.404000 CAAGAGAAGGATTAGGAATCATGTTTG 58.596 37.037 0.00 0.00 39.71 2.93
4321 4972 9.965824 TGTTTGATTACAAGAAGGAAAAGAATC 57.034 29.630 0.00 0.00 37.32 2.52
4322 4973 9.118236 GTTTGATTACAAGAAGGAAAAGAATCG 57.882 33.333 0.00 0.00 37.32 3.34
4323 4974 7.377766 TGATTACAAGAAGGAAAAGAATCGG 57.622 36.000 0.00 0.00 0.00 4.18
4324 4975 6.374333 TGATTACAAGAAGGAAAAGAATCGGG 59.626 38.462 0.00 0.00 0.00 5.14
4325 4976 4.367039 ACAAGAAGGAAAAGAATCGGGA 57.633 40.909 0.00 0.00 0.00 5.14
4326 4977 4.327680 ACAAGAAGGAAAAGAATCGGGAG 58.672 43.478 0.00 0.00 0.00 4.30
4327 4978 4.041691 ACAAGAAGGAAAAGAATCGGGAGA 59.958 41.667 0.00 0.00 46.90 3.71
4328 4979 4.479786 AGAAGGAAAAGAATCGGGAGAG 57.520 45.455 0.00 0.00 45.48 3.20
4330 4981 2.834113 AGGAAAAGAATCGGGAGAGGA 58.166 47.619 0.00 0.00 45.48 3.71
4331 4982 3.182152 AGGAAAAGAATCGGGAGAGGAA 58.818 45.455 0.00 0.00 45.48 3.36
4333 4984 3.197983 GGAAAAGAATCGGGAGAGGAAGA 59.802 47.826 0.00 0.00 45.48 2.87
4335 4986 4.910458 AAAGAATCGGGAGAGGAAGAAA 57.090 40.909 0.00 0.00 45.48 2.52
4336 4987 4.479786 AAGAATCGGGAGAGGAAGAAAG 57.520 45.455 0.00 0.00 45.48 2.62
4337 4988 3.714144 AGAATCGGGAGAGGAAGAAAGA 58.286 45.455 0.00 0.00 45.48 2.52
4338 4989 3.704061 AGAATCGGGAGAGGAAGAAAGAG 59.296 47.826 0.00 0.00 45.48 2.85
4339 4990 2.901338 TCGGGAGAGGAAGAAAGAGA 57.099 50.000 0.00 0.00 0.00 3.10
4340 4991 3.390175 TCGGGAGAGGAAGAAAGAGAT 57.610 47.619 0.00 0.00 0.00 2.75
4342 4993 4.465886 TCGGGAGAGGAAGAAAGAGATAG 58.534 47.826 0.00 0.00 0.00 2.08
4343 4994 4.079672 TCGGGAGAGGAAGAAAGAGATAGT 60.080 45.833 0.00 0.00 0.00 2.12
4344 4995 4.647399 CGGGAGAGGAAGAAAGAGATAGTT 59.353 45.833 0.00 0.00 0.00 2.24
4345 4996 5.451242 CGGGAGAGGAAGAAAGAGATAGTTG 60.451 48.000 0.00 0.00 0.00 3.16
4347 4998 6.183360 GGGAGAGGAAGAAAGAGATAGTTGAG 60.183 46.154 0.00 0.00 0.00 3.02
4348 4999 6.605594 GGAGAGGAAGAAAGAGATAGTTGAGA 59.394 42.308 0.00 0.00 0.00 3.27
4349 5000 7.287696 GGAGAGGAAGAAAGAGATAGTTGAGAT 59.712 40.741 0.00 0.00 0.00 2.75
4350 5001 8.608185 AGAGGAAGAAAGAGATAGTTGAGATT 57.392 34.615 0.00 0.00 0.00 2.40
4352 5003 9.744468 GAGGAAGAAAGAGATAGTTGAGATTAC 57.256 37.037 0.00 0.00 0.00 1.89
4354 5005 9.877178 GGAAGAAAGAGATAGTTGAGATTACAA 57.123 33.333 0.00 0.00 0.00 2.41
4368 5019 9.694137 GTTGAGATTACAACTACTACTCAAACT 57.306 33.333 0.00 0.00 44.34 2.66
4370 5021 9.298250 TGAGATTACAACTACTACTCAAACTCT 57.702 33.333 0.00 0.00 31.51 3.24
4375 5026 9.956720 TTACAACTACTACTCAAACTCTAACAC 57.043 33.333 0.00 0.00 0.00 3.32
4376 5027 7.432059 ACAACTACTACTCAAACTCTAACACC 58.568 38.462 0.00 0.00 0.00 4.16
4377 5028 6.587206 ACTACTACTCAAACTCTAACACCC 57.413 41.667 0.00 0.00 0.00 4.61
4379 5030 5.725325 ACTACTCAAACTCTAACACCCTC 57.275 43.478 0.00 0.00 0.00 4.30
4381 5032 2.638363 ACTCAAACTCTAACACCCTCCC 59.362 50.000 0.00 0.00 0.00 4.30
4382 5033 2.907042 CTCAAACTCTAACACCCTCCCT 59.093 50.000 0.00 0.00 0.00 4.20
4383 5034 3.323775 TCAAACTCTAACACCCTCCCTT 58.676 45.455 0.00 0.00 0.00 3.95
4384 5035 4.495565 TCAAACTCTAACACCCTCCCTTA 58.504 43.478 0.00 0.00 0.00 2.69
4385 5036 4.909088 TCAAACTCTAACACCCTCCCTTAA 59.091 41.667 0.00 0.00 0.00 1.85
4386 5037 5.550403 TCAAACTCTAACACCCTCCCTTAAT 59.450 40.000 0.00 0.00 0.00 1.40
4388 5039 4.961585 ACTCTAACACCCTCCCTTAATCT 58.038 43.478 0.00 0.00 0.00 2.40
4389 5040 6.101274 ACTCTAACACCCTCCCTTAATCTA 57.899 41.667 0.00 0.00 0.00 1.98
4391 5042 6.964086 ACTCTAACACCCTCCCTTAATCTAAA 59.036 38.462 0.00 0.00 0.00 1.85
4393 5044 6.964086 TCTAACACCCTCCCTTAATCTAAACT 59.036 38.462 0.00 0.00 0.00 2.66
4400 5051 8.474268 ACCCTCCCTTAATCTAAACTATCCTAT 58.526 37.037 0.00 0.00 0.00 2.57
4401 5052 8.763601 CCCTCCCTTAATCTAAACTATCCTATG 58.236 40.741 0.00 0.00 0.00 2.23
4416 5067 9.829507 AACTATCCTATGTTGAGATTTCTCTTG 57.170 33.333 8.91 0.00 43.25 3.02
4419 5070 8.729805 ATCCTATGTTGAGATTTCTCTTGAAC 57.270 34.615 8.91 5.90 43.25 3.18
4420 5071 7.911651 TCCTATGTTGAGATTTCTCTTGAACT 58.088 34.615 8.91 0.00 43.25 3.01
4421 5072 8.037758 TCCTATGTTGAGATTTCTCTTGAACTC 58.962 37.037 8.91 0.00 43.25 3.01
4423 5074 9.434420 CTATGTTGAGATTTCTCTTGAACTCTT 57.566 33.333 8.91 0.00 40.68 2.85
4424 5075 7.721286 TGTTGAGATTTCTCTTGAACTCTTC 57.279 36.000 8.91 0.00 40.68 2.87
4425 5076 7.275183 TGTTGAGATTTCTCTTGAACTCTTCA 58.725 34.615 8.91 0.00 40.68 3.02
4426 5077 7.770433 TGTTGAGATTTCTCTTGAACTCTTCAA 59.230 33.333 8.91 0.00 46.09 2.69
4438 5089 5.816919 TGAACTCTTCAAAAAGCTTAACCG 58.183 37.500 0.00 0.00 36.59 4.44
4439 5090 4.830826 ACTCTTCAAAAAGCTTAACCGG 57.169 40.909 0.00 0.00 32.18 5.28
4440 5091 3.004419 ACTCTTCAAAAAGCTTAACCGGC 59.996 43.478 0.00 0.00 32.18 6.13
4442 5093 3.381908 TCTTCAAAAAGCTTAACCGGCAA 59.618 39.130 0.00 0.00 32.18 4.52
4443 5094 3.363341 TCAAAAAGCTTAACCGGCAAG 57.637 42.857 0.00 6.71 0.00 4.01
4444 5095 7.456071 TCTTCAAAAAGCTTAACCGGCAAGG 62.456 44.000 15.98 0.41 38.02 3.61
4446 5097 0.539669 AAAGCTTAACCGGCAAGGCT 60.540 50.000 15.98 12.00 46.52 4.58
4447 5098 0.539669 AAGCTTAACCGGCAAGGCTT 60.540 50.000 17.17 17.17 46.52 4.35
4448 5099 0.539669 AGCTTAACCGGCAAGGCTTT 60.540 50.000 15.98 0.00 46.52 3.51
4449 5100 1.170442 GCTTAACCGGCAAGGCTTTA 58.830 50.000 15.98 0.00 46.52 1.85
4450 5101 1.132453 GCTTAACCGGCAAGGCTTTAG 59.868 52.381 15.98 1.07 46.52 1.85
4451 5102 2.433436 CTTAACCGGCAAGGCTTTAGT 58.567 47.619 0.00 0.00 46.52 2.24
4452 5103 1.816074 TAACCGGCAAGGCTTTAGTG 58.184 50.000 0.00 0.00 46.52 2.74
4454 5105 0.109723 ACCGGCAAGGCTTTAGTGAA 59.890 50.000 0.00 0.00 46.52 3.18
4455 5106 0.521735 CCGGCAAGGCTTTAGTGAAC 59.478 55.000 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 4.654915 TCAGAGCCATGAAGAATTGTGAA 58.345 39.130 0.00 0.00 0.00 3.18
39 40 5.821470 ACTATCAGAGCCATGAAGAATTGTG 59.179 40.000 0.00 0.00 31.76 3.33
71 73 1.819632 CTAACTCGTGGGGCCATGC 60.820 63.158 4.39 0.00 33.28 4.06
195 198 2.962421 CCCACTCCCTGTAAAGCAAAAA 59.038 45.455 0.00 0.00 0.00 1.94
484 492 9.715121 AATTAGGACACAACGAGAAAGTAAATA 57.285 29.630 0.00 0.00 0.00 1.40
485 493 8.617290 AATTAGGACACAACGAGAAAGTAAAT 57.383 30.769 0.00 0.00 0.00 1.40
680 707 3.924686 CCGATAGTTCTGTACGCAACTTT 59.075 43.478 12.97 6.91 34.60 2.66
784 812 0.955919 GCAGCACCTACCACACTTCC 60.956 60.000 0.00 0.00 0.00 3.46
940 968 5.892119 TCTTGACATCCCCACTAACTACTAG 59.108 44.000 0.00 0.00 0.00 2.57
971 999 5.829924 CAGGGCAGATAGTTGGAACATTTAT 59.170 40.000 0.00 0.00 39.30 1.40
1219 1249 4.688879 TGTTAGTGTGATTTTACTCCTGCG 59.311 41.667 0.00 0.00 0.00 5.18
1227 1257 7.147983 ACCTTTGTGCTTGTTAGTGTGATTTTA 60.148 33.333 0.00 0.00 0.00 1.52
1415 1460 6.018994 CCTTTTTATGTATGTGGACTAGTCGC 60.019 42.308 16.56 12.13 0.00 5.19
1468 1513 4.077822 AGATGCCAAGAAAGTGGAGAAAG 58.922 43.478 0.00 0.00 41.65 2.62
1772 1819 5.016051 ACGCTCATTAACTGTCTGATGAT 57.984 39.130 2.54 0.00 0.00 2.45
1773 1820 4.456280 ACGCTCATTAACTGTCTGATGA 57.544 40.909 0.00 0.00 0.00 2.92
1774 1821 5.979517 TGATACGCTCATTAACTGTCTGATG 59.020 40.000 0.00 0.00 0.00 3.07
2082 2168 3.241530 TGAGCTTGGGCCTCGTGT 61.242 61.111 4.53 0.00 39.73 4.49
2115 2201 0.246635 GGCGCTGAAGAAGAGGTACA 59.753 55.000 7.64 0.00 0.00 2.90
2200 2286 5.663106 AGAGAGGTTGATGAAGGTTATAGCA 59.337 40.000 0.00 0.00 0.00 3.49
2203 2289 6.325028 CAGGAGAGAGGTTGATGAAGGTTATA 59.675 42.308 0.00 0.00 0.00 0.98
2296 2382 1.445410 CGTTCCGGTGATCTTCGCA 60.445 57.895 0.00 0.00 0.00 5.10
2299 2385 0.108804 TGAGCGTTCCGGTGATCTTC 60.109 55.000 0.00 0.00 37.83 2.87
2385 2471 1.451028 GCTGGGCTAGGTGCAGAAG 60.451 63.158 0.00 0.00 45.15 2.85
2386 2472 1.920325 AGCTGGGCTAGGTGCAGAA 60.920 57.895 0.39 0.00 45.15 3.02
2387 2473 2.284921 AGCTGGGCTAGGTGCAGA 60.285 61.111 0.39 0.00 45.15 4.26
2506 2607 0.181114 TGGTCAGCTTTGTCTGCAGT 59.819 50.000 14.67 0.00 34.19 4.40
2538 2639 4.827284 TGATGGCAGTATTCGAGTAGATGA 59.173 41.667 0.00 0.00 0.00 2.92
2548 2649 6.261603 TGATGAAGAACATGATGGCAGTATTC 59.738 38.462 0.00 0.00 39.56 1.75
2550 2651 5.687780 TGATGAAGAACATGATGGCAGTAT 58.312 37.500 0.00 0.00 39.56 2.12
2596 2697 0.460987 GTCTCTCCATCGCCAAGGTG 60.461 60.000 0.00 0.00 0.00 4.00
2599 2700 0.803768 CGTGTCTCTCCATCGCCAAG 60.804 60.000 0.00 0.00 0.00 3.61
2717 2822 3.380479 TCTCTTTGTGAAGGTGGTACG 57.620 47.619 0.00 0.00 33.56 3.67
2718 2823 4.957296 TCTTCTCTTTGTGAAGGTGGTAC 58.043 43.478 8.78 0.00 40.73 3.34
2719 2824 5.623956 TTCTTCTCTTTGTGAAGGTGGTA 57.376 39.130 8.78 0.00 40.73 3.25
2720 2825 4.503714 TTCTTCTCTTTGTGAAGGTGGT 57.496 40.909 8.78 0.00 40.73 4.16
2751 2856 3.165071 AGTTGCCCCTTTTGGATAAGTG 58.835 45.455 0.00 0.00 44.07 3.16
2752 2857 3.542969 AGTTGCCCCTTTTGGATAAGT 57.457 42.857 0.00 0.00 44.07 2.24
2796 2901 6.531503 AGACTAGTGTTAGCTGCAAGATAA 57.468 37.500 0.00 0.00 43.45 1.75
2797 2902 7.825331 ATAGACTAGTGTTAGCTGCAAGATA 57.175 36.000 0.00 0.00 34.07 1.98
2798 2903 6.723298 ATAGACTAGTGTTAGCTGCAAGAT 57.277 37.500 0.00 0.00 34.07 2.40
2799 2904 7.825331 ATATAGACTAGTGTTAGCTGCAAGA 57.175 36.000 0.00 0.00 34.07 3.02
2820 2925 5.163723 GCTGGCGTGTATTGATTGCATATAT 60.164 40.000 0.00 0.00 0.00 0.86
2821 2926 4.154015 GCTGGCGTGTATTGATTGCATATA 59.846 41.667 0.00 0.00 0.00 0.86
2822 2927 3.058016 GCTGGCGTGTATTGATTGCATAT 60.058 43.478 0.00 0.00 0.00 1.78
2850 2955 4.082463 GGTTTCAGTTGTTCAAGTTGGTCA 60.082 41.667 2.34 0.08 0.00 4.02
2874 2979 4.561735 ATTTTCACCACCACGTACTTTG 57.438 40.909 0.00 0.00 0.00 2.77
2878 2983 9.316730 TCTATTATTATTTTCACCACCACGTAC 57.683 33.333 0.00 0.00 0.00 3.67
2932 3037 9.970395 CCTGCACATGTAATAATTTCATTGTAT 57.030 29.630 0.00 0.00 0.00 2.29
2934 3039 7.267128 CCCTGCACATGTAATAATTTCATTGT 58.733 34.615 0.00 0.00 0.00 2.71
2942 3047 6.454223 ACTATCCCCTGCACATGTAATAAT 57.546 37.500 0.00 0.00 0.00 1.28
2943 3048 5.510690 CGACTATCCCCTGCACATGTAATAA 60.511 44.000 0.00 0.00 0.00 1.40
2944 3049 4.021456 CGACTATCCCCTGCACATGTAATA 60.021 45.833 0.00 0.00 0.00 0.98
3056 3161 7.520798 AGAAGAAATCAATGATGGCTACCATA 58.479 34.615 0.00 0.00 45.26 2.74
3071 3176 5.879763 TGTTCATGGAGGAAGAAGAAATCA 58.120 37.500 0.00 0.00 0.00 2.57
3124 3229 3.688673 GGAGGCATGAAACTGAGAAGAAG 59.311 47.826 0.00 0.00 0.00 2.85
3158 3263 2.093553 TCGGCAGTGACAATGATCATCA 60.094 45.455 9.06 0.42 0.00 3.07
3173 3278 5.991328 ATGTATACATGAAACTTCGGCAG 57.009 39.130 17.60 0.00 34.83 4.85
3213 3318 3.076621 TGTTTATCTCCAGCAGCAACAG 58.923 45.455 0.00 0.00 0.00 3.16
3215 3320 4.022849 ACTTTGTTTATCTCCAGCAGCAAC 60.023 41.667 0.00 0.00 0.00 4.17
3219 3324 8.299570 ACAATTAACTTTGTTTATCTCCAGCAG 58.700 33.333 0.00 0.00 36.43 4.24
3275 3381 9.198837 ACGATAATCAACACGCATAAATATGTA 57.801 29.630 0.00 0.00 36.11 2.29
3276 3382 8.083462 ACGATAATCAACACGCATAAATATGT 57.917 30.769 0.00 0.00 36.11 2.29
3277 3383 8.933438 AACGATAATCAACACGCATAAATATG 57.067 30.769 0.00 0.00 36.78 1.78
3284 3390 5.332280 CGATGTAACGATAATCAACACGCAT 60.332 40.000 0.00 0.00 35.09 4.73
3288 3394 4.605354 CGCCGATGTAACGATAATCAACAC 60.605 45.833 0.00 0.00 35.09 3.32
3293 3399 2.160013 GCACGCCGATGTAACGATAATC 60.160 50.000 0.00 0.00 35.09 1.75
3296 3402 0.100861 TGCACGCCGATGTAACGATA 59.899 50.000 0.00 0.00 35.09 2.92
3297 3403 0.529773 ATGCACGCCGATGTAACGAT 60.530 50.000 0.00 0.00 35.09 3.73
3298 3404 1.153726 ATGCACGCCGATGTAACGA 60.154 52.632 0.00 0.00 35.09 3.85
3299 3405 1.012343 CATGCACGCCGATGTAACG 60.012 57.895 0.00 0.00 0.00 3.18
3300 3406 1.005347 GTACATGCACGCCGATGTAAC 60.005 52.381 0.00 0.00 36.93 2.50
3301 3407 1.282817 GTACATGCACGCCGATGTAA 58.717 50.000 0.00 0.00 36.93 2.41
3302 3408 0.173708 TGTACATGCACGCCGATGTA 59.826 50.000 0.00 0.00 34.60 2.29
3303 3409 1.079474 TGTACATGCACGCCGATGT 60.079 52.632 0.00 0.00 36.72 3.06
3436 3542 2.356313 ACGGCTTGTCGTCAGCTG 60.356 61.111 7.63 7.63 39.34 4.24
3456 3562 2.838202 TCCAAGGGTGTAATCTCCAGTC 59.162 50.000 0.00 0.00 0.00 3.51
3461 3567 9.628500 AGTAATAAAATCCAAGGGTGTAATCTC 57.372 33.333 0.00 0.00 0.00 2.75
3465 3571 6.948886 TGCAGTAATAAAATCCAAGGGTGTAA 59.051 34.615 0.00 0.00 0.00 2.41
3480 3590 9.896263 CATATATGTGTTGCATTGCAGTAATAA 57.104 29.630 11.76 0.00 40.61 1.40
3481 3591 9.065798 ACATATATGTGTTGCATTGCAGTAATA 57.934 29.630 17.60 9.09 38.71 0.98
3482 3592 7.944061 ACATATATGTGTTGCATTGCAGTAAT 58.056 30.769 17.60 7.30 38.71 1.89
3484 3594 6.940831 ACATATATGTGTTGCATTGCAGTA 57.059 33.333 17.60 2.18 38.71 2.74
3486 3596 6.962686 ACTACATATATGTGTTGCATTGCAG 58.037 36.000 25.48 14.06 41.89 4.41
3674 3870 2.101640 TCTCCCATATGCAGCTACCA 57.898 50.000 0.00 0.00 0.00 3.25
3692 3888 3.303495 CGACCCGTGATCGCATATAATTC 59.697 47.826 7.12 0.00 35.54 2.17
3720 3916 6.317391 ACAAAGTTCTTGAGAAGGAAGAAGTG 59.683 38.462 0.00 0.00 40.61 3.16
3790 3986 7.358270 CGAGAATTTTTCGATGAAATGCAAACA 60.358 33.333 12.67 0.00 40.36 2.83
3952 4150 8.462143 CACAATATGCTATTTACCTACGGTAG 57.538 38.462 8.22 8.22 39.52 3.18
3990 4188 0.107508 TGCATAGCTCAGCCTCAACC 60.108 55.000 7.73 0.00 0.00 3.77
4046 4244 9.057089 CATAAGAGGAAAAAGTGTACTTTGACT 57.943 33.333 10.48 8.99 44.69 3.41
4083 4283 7.327975 CACTACTACAATCCAAGGACACAATA 58.672 38.462 0.00 0.00 0.00 1.90
4094 4294 5.755409 ATGTGTTCCACTACTACAATCCA 57.245 39.130 0.00 0.00 35.11 3.41
4095 4295 9.826574 TTATTATGTGTTCCACTACTACAATCC 57.173 33.333 0.00 0.00 35.11 3.01
4128 4328 1.282157 AGATGTGCCCTAGACAAACCC 59.718 52.381 0.00 0.00 0.00 4.11
4129 4329 2.789409 AGATGTGCCCTAGACAAACC 57.211 50.000 0.00 0.00 0.00 3.27
4130 4330 4.737855 TCTAGATGTGCCCTAGACAAAC 57.262 45.455 0.00 0.00 38.08 2.93
4131 4331 5.282055 CATCTAGATGTGCCCTAGACAAA 57.718 43.478 22.42 0.00 43.57 2.83
4144 4344 7.383572 GTGCAATAACTAGGACACATCTAGATG 59.616 40.741 27.63 27.63 44.15 2.90
4145 4345 7.069950 TGTGCAATAACTAGGACACATCTAGAT 59.930 37.037 0.00 0.00 38.02 1.98
4148 4348 6.538945 TGTGCAATAACTAGGACACATCTA 57.461 37.500 0.00 0.00 33.41 1.98
4149 4349 5.420725 TGTGCAATAACTAGGACACATCT 57.579 39.130 0.00 0.00 33.41 2.90
4154 4354 7.041721 CACTTAGATGTGCAATAACTAGGACA 58.958 38.462 0.00 0.00 40.35 4.02
4155 4355 6.480320 CCACTTAGATGTGCAATAACTAGGAC 59.520 42.308 0.00 0.00 36.68 3.85
4156 4356 6.582636 CCACTTAGATGTGCAATAACTAGGA 58.417 40.000 0.00 0.00 36.68 2.94
4157 4357 5.237344 GCCACTTAGATGTGCAATAACTAGG 59.763 44.000 0.00 0.00 36.68 3.02
4158 4358 6.051717 AGCCACTTAGATGTGCAATAACTAG 58.948 40.000 0.00 0.00 36.68 2.57
4159 4359 5.989477 AGCCACTTAGATGTGCAATAACTA 58.011 37.500 0.00 0.00 36.68 2.24
4160 4360 4.848357 AGCCACTTAGATGTGCAATAACT 58.152 39.130 0.00 0.00 36.68 2.24
4161 4361 4.635765 TGAGCCACTTAGATGTGCAATAAC 59.364 41.667 0.00 0.00 36.68 1.89
4162 4362 4.842574 TGAGCCACTTAGATGTGCAATAA 58.157 39.130 0.00 0.00 36.68 1.40
4163 4363 4.486125 TGAGCCACTTAGATGTGCAATA 57.514 40.909 0.00 0.00 36.68 1.90
4164 4364 3.354948 TGAGCCACTTAGATGTGCAAT 57.645 42.857 0.00 0.00 36.68 3.56
4166 4366 4.694760 ATATGAGCCACTTAGATGTGCA 57.305 40.909 0.00 0.00 36.68 4.57
4167 4367 6.459066 TCTAATATGAGCCACTTAGATGTGC 58.541 40.000 0.00 0.00 36.68 4.57
4168 4368 9.499479 AAATCTAATATGAGCCACTTAGATGTG 57.501 33.333 15.13 0.00 39.59 3.21
4169 4369 9.499479 CAAATCTAATATGAGCCACTTAGATGT 57.501 33.333 15.13 10.86 39.59 3.06
4170 4370 9.716531 TCAAATCTAATATGAGCCACTTAGATG 57.283 33.333 15.13 10.00 39.59 2.90
4176 4376 8.985315 TTCAATCAAATCTAATATGAGCCACT 57.015 30.769 0.00 0.00 0.00 4.00
4179 4379 7.020010 CGCTTCAATCAAATCTAATATGAGCC 58.980 38.462 0.00 0.00 0.00 4.70
4181 4381 9.591404 GAACGCTTCAATCAAATCTAATATGAG 57.409 33.333 0.00 0.00 0.00 2.90
4183 4383 8.562892 AGGAACGCTTCAATCAAATCTAATATG 58.437 33.333 0.00 0.00 0.00 1.78
4185 4385 9.042008 GTAGGAACGCTTCAATCAAATCTAATA 57.958 33.333 0.00 0.00 0.00 0.98
4186 4386 7.770897 AGTAGGAACGCTTCAATCAAATCTAAT 59.229 33.333 0.00 0.00 0.00 1.73
4189 4389 5.491982 AGTAGGAACGCTTCAATCAAATCT 58.508 37.500 0.00 0.00 0.00 2.40
4190 4390 5.582665 AGAGTAGGAACGCTTCAATCAAATC 59.417 40.000 0.00 0.00 30.81 2.17
4191 4391 5.491982 AGAGTAGGAACGCTTCAATCAAAT 58.508 37.500 0.00 0.00 30.81 2.32
4192 4392 4.894784 AGAGTAGGAACGCTTCAATCAAA 58.105 39.130 0.00 0.00 30.81 2.69
4193 4393 4.495422 GAGAGTAGGAACGCTTCAATCAA 58.505 43.478 0.00 0.00 35.71 2.57
4195 4395 3.131400 AGGAGAGTAGGAACGCTTCAATC 59.869 47.826 0.00 0.00 35.71 2.67
4196 4396 3.100671 AGGAGAGTAGGAACGCTTCAAT 58.899 45.455 0.00 0.00 35.71 2.57
4197 4397 2.231478 CAGGAGAGTAGGAACGCTTCAA 59.769 50.000 0.00 0.00 35.71 2.69
4201 4401 2.096248 CTTCAGGAGAGTAGGAACGCT 58.904 52.381 0.00 0.00 38.60 5.07
4202 4402 1.135333 CCTTCAGGAGAGTAGGAACGC 59.865 57.143 0.00 0.00 37.39 4.84
4214 4414 1.984570 CCACGGCTCTCCTTCAGGA 60.985 63.158 0.00 0.00 43.08 3.86
4215 4415 2.581354 CCACGGCTCTCCTTCAGG 59.419 66.667 0.00 0.00 0.00 3.86
4216 4416 2.125350 GCCACGGCTCTCCTTCAG 60.125 66.667 0.00 0.00 38.26 3.02
4226 4426 5.432885 ACATATAAATAAACAGCCACGGC 57.567 39.130 0.00 0.00 42.33 5.68
4227 4427 6.205784 CCAACATATAAATAAACAGCCACGG 58.794 40.000 0.00 0.00 0.00 4.94
4228 4428 5.685511 GCCAACATATAAATAAACAGCCACG 59.314 40.000 0.00 0.00 0.00 4.94
4229 4429 6.568869 TGCCAACATATAAATAAACAGCCAC 58.431 36.000 0.00 0.00 0.00 5.01
4230 4430 6.782082 TGCCAACATATAAATAAACAGCCA 57.218 33.333 0.00 0.00 0.00 4.75
4231 4431 8.387354 GTTTTGCCAACATATAAATAAACAGCC 58.613 33.333 0.00 0.00 0.00 4.85
4232 4432 8.930760 TGTTTTGCCAACATATAAATAAACAGC 58.069 29.630 0.00 0.00 31.61 4.40
4234 4434 9.209175 GGTGTTTTGCCAACATATAAATAAACA 57.791 29.630 2.16 0.00 32.47 2.83
4235 4435 9.430623 AGGTGTTTTGCCAACATATAAATAAAC 57.569 29.630 2.16 0.00 32.23 2.01
4239 4439 7.602265 GTCAAGGTGTTTTGCCAACATATAAAT 59.398 33.333 2.16 0.00 32.23 1.40
4240 4440 6.926272 GTCAAGGTGTTTTGCCAACATATAAA 59.074 34.615 2.16 0.00 32.23 1.40
4241 4441 6.451393 GTCAAGGTGTTTTGCCAACATATAA 58.549 36.000 2.16 0.00 32.23 0.98
4242 4442 5.335269 CGTCAAGGTGTTTTGCCAACATATA 60.335 40.000 2.16 0.00 32.23 0.86
4243 4443 4.558496 CGTCAAGGTGTTTTGCCAACATAT 60.558 41.667 2.16 0.00 32.23 1.78
4245 4445 2.481104 CGTCAAGGTGTTTTGCCAACAT 60.481 45.455 2.16 0.00 32.23 2.71
4246 4446 1.135257 CGTCAAGGTGTTTTGCCAACA 60.135 47.619 0.00 0.00 0.00 3.33
4247 4447 1.555477 CGTCAAGGTGTTTTGCCAAC 58.445 50.000 0.00 0.00 0.00 3.77
4248 4448 0.457851 CCGTCAAGGTGTTTTGCCAA 59.542 50.000 0.00 0.00 34.51 4.52
4249 4449 1.388065 CCCGTCAAGGTGTTTTGCCA 61.388 55.000 0.00 0.00 38.74 4.92
4250 4450 1.104577 TCCCGTCAAGGTGTTTTGCC 61.105 55.000 0.00 0.00 38.74 4.52
4251 4451 0.310854 CTCCCGTCAAGGTGTTTTGC 59.689 55.000 0.00 0.00 38.74 3.68
4252 4452 0.951558 CCTCCCGTCAAGGTGTTTTG 59.048 55.000 0.00 0.00 38.74 2.44
4253 4453 0.549469 ACCTCCCGTCAAGGTGTTTT 59.451 50.000 0.26 0.00 45.50 2.43
4254 4454 1.071228 GTACCTCCCGTCAAGGTGTTT 59.929 52.381 10.06 0.00 46.63 2.83
4255 4455 0.683412 GTACCTCCCGTCAAGGTGTT 59.317 55.000 10.06 0.00 46.63 3.32
4256 4456 0.470456 TGTACCTCCCGTCAAGGTGT 60.470 55.000 10.06 0.00 46.63 4.16
4257 4457 0.682852 TTGTACCTCCCGTCAAGGTG 59.317 55.000 10.06 0.00 46.63 4.00
4259 4459 1.204941 CTCTTGTACCTCCCGTCAAGG 59.795 57.143 0.00 0.00 38.13 3.61
4260 4460 2.168496 TCTCTTGTACCTCCCGTCAAG 58.832 52.381 0.00 0.00 38.69 3.02
4262 4462 2.168496 CTTCTCTTGTACCTCCCGTCA 58.832 52.381 0.00 0.00 0.00 4.35
4263 4463 1.477295 CCTTCTCTTGTACCTCCCGTC 59.523 57.143 0.00 0.00 0.00 4.79
4265 4465 1.848652 TCCTTCTCTTGTACCTCCCG 58.151 55.000 0.00 0.00 0.00 5.14
4266 4466 4.345547 CCTAATCCTTCTCTTGTACCTCCC 59.654 50.000 0.00 0.00 0.00 4.30
4267 4467 5.209659 TCCTAATCCTTCTCTTGTACCTCC 58.790 45.833 0.00 0.00 0.00 4.30
4268 4468 6.793505 TTCCTAATCCTTCTCTTGTACCTC 57.206 41.667 0.00 0.00 0.00 3.85
4269 4469 6.903534 TGATTCCTAATCCTTCTCTTGTACCT 59.096 38.462 0.00 0.00 37.09 3.08
4270 4470 7.125792 TGATTCCTAATCCTTCTCTTGTACC 57.874 40.000 0.00 0.00 37.09 3.34
4272 4472 8.324191 ACATGATTCCTAATCCTTCTCTTGTA 57.676 34.615 0.00 0.00 37.09 2.41
4273 4473 7.205515 ACATGATTCCTAATCCTTCTCTTGT 57.794 36.000 0.00 0.00 37.09 3.16
4274 4474 8.404000 CAAACATGATTCCTAATCCTTCTCTTG 58.596 37.037 0.00 0.00 37.09 3.02
4275 4475 8.331740 TCAAACATGATTCCTAATCCTTCTCTT 58.668 33.333 0.00 0.00 37.09 2.85
4277 4477 8.688747 ATCAAACATGATTCCTAATCCTTCTC 57.311 34.615 0.00 0.00 37.09 2.87
4281 4481 9.699410 TTGTAATCAAACATGATTCCTAATCCT 57.301 29.630 7.29 0.00 39.10 3.24
4282 4482 9.956720 CTTGTAATCAAACATGATTCCTAATCC 57.043 33.333 7.29 0.00 39.10 3.01
4287 4938 7.890127 TCCTTCTTGTAATCAAACATGATTCCT 59.110 33.333 7.29 0.00 39.10 3.36
4288 4939 8.055279 TCCTTCTTGTAATCAAACATGATTCC 57.945 34.615 7.29 0.00 39.10 3.01
4289 4940 9.912634 TTTCCTTCTTGTAATCAAACATGATTC 57.087 29.630 7.29 1.98 39.10 2.52
4292 4943 9.130661 TCTTTTCCTTCTTGTAATCAAACATGA 57.869 29.630 0.00 0.00 33.23 3.07
4296 4947 9.118236 CGATTCTTTTCCTTCTTGTAATCAAAC 57.882 33.333 0.00 0.00 32.87 2.93
4299 4950 6.374333 CCCGATTCTTTTCCTTCTTGTAATCA 59.626 38.462 0.00 0.00 0.00 2.57
4300 4951 6.598064 TCCCGATTCTTTTCCTTCTTGTAATC 59.402 38.462 0.00 0.00 0.00 1.75
4303 4954 5.247564 TCTCCCGATTCTTTTCCTTCTTGTA 59.752 40.000 0.00 0.00 0.00 2.41
4305 4956 4.579869 TCTCCCGATTCTTTTCCTTCTTG 58.420 43.478 0.00 0.00 0.00 3.02
4311 4962 3.197983 TCTTCCTCTCCCGATTCTTTTCC 59.802 47.826 0.00 0.00 0.00 3.13
4314 4965 4.532521 TCTTTCTTCCTCTCCCGATTCTTT 59.467 41.667 0.00 0.00 0.00 2.52
4320 4971 2.901338 TCTCTTTCTTCCTCTCCCGA 57.099 50.000 0.00 0.00 0.00 5.14
4321 4972 4.211920 ACTATCTCTTTCTTCCTCTCCCG 58.788 47.826 0.00 0.00 0.00 5.14
4322 4973 5.659079 TCAACTATCTCTTTCTTCCTCTCCC 59.341 44.000 0.00 0.00 0.00 4.30
4323 4974 6.605594 TCTCAACTATCTCTTTCTTCCTCTCC 59.394 42.308 0.00 0.00 0.00 3.71
4324 4975 7.639113 TCTCAACTATCTCTTTCTTCCTCTC 57.361 40.000 0.00 0.00 0.00 3.20
4325 4976 8.608185 AATCTCAACTATCTCTTTCTTCCTCT 57.392 34.615 0.00 0.00 0.00 3.69
4326 4977 9.744468 GTAATCTCAACTATCTCTTTCTTCCTC 57.256 37.037 0.00 0.00 0.00 3.71
4327 4978 9.261035 TGTAATCTCAACTATCTCTTTCTTCCT 57.739 33.333 0.00 0.00 0.00 3.36
4328 4979 9.877178 TTGTAATCTCAACTATCTCTTTCTTCC 57.123 33.333 0.00 0.00 0.00 3.46
4342 4993 9.694137 AGTTTGAGTAGTAGTTGTAATCTCAAC 57.306 33.333 0.00 1.94 45.33 3.18
4343 4994 9.909644 GAGTTTGAGTAGTAGTTGTAATCTCAA 57.090 33.333 0.00 0.00 38.23 3.02
4344 4995 9.298250 AGAGTTTGAGTAGTAGTTGTAATCTCA 57.702 33.333 0.00 0.00 0.00 3.27
4349 5000 9.956720 GTGTTAGAGTTTGAGTAGTAGTTGTAA 57.043 33.333 0.00 0.00 0.00 2.41
4350 5001 8.571336 GGTGTTAGAGTTTGAGTAGTAGTTGTA 58.429 37.037 0.00 0.00 0.00 2.41
4352 5003 6.867293 GGGTGTTAGAGTTTGAGTAGTAGTTG 59.133 42.308 0.00 0.00 0.00 3.16
4354 5005 6.313324 AGGGTGTTAGAGTTTGAGTAGTAGT 58.687 40.000 0.00 0.00 0.00 2.73
4356 5007 5.713861 GGAGGGTGTTAGAGTTTGAGTAGTA 59.286 44.000 0.00 0.00 0.00 1.82
4357 5008 4.527427 GGAGGGTGTTAGAGTTTGAGTAGT 59.473 45.833 0.00 0.00 0.00 2.73
4358 5009 4.081586 GGGAGGGTGTTAGAGTTTGAGTAG 60.082 50.000 0.00 0.00 0.00 2.57
4359 5010 3.836562 GGGAGGGTGTTAGAGTTTGAGTA 59.163 47.826 0.00 0.00 0.00 2.59
4360 5011 2.638363 GGGAGGGTGTTAGAGTTTGAGT 59.362 50.000 0.00 0.00 0.00 3.41
4361 5012 2.907042 AGGGAGGGTGTTAGAGTTTGAG 59.093 50.000 0.00 0.00 0.00 3.02
4362 5013 2.986050 AGGGAGGGTGTTAGAGTTTGA 58.014 47.619 0.00 0.00 0.00 2.69
4363 5014 3.790089 AAGGGAGGGTGTTAGAGTTTG 57.210 47.619 0.00 0.00 0.00 2.93
4364 5015 5.791141 AGATTAAGGGAGGGTGTTAGAGTTT 59.209 40.000 0.00 0.00 0.00 2.66
4367 5018 7.125963 AGTTTAGATTAAGGGAGGGTGTTAGAG 59.874 40.741 0.00 0.00 0.00 2.43
4368 5019 6.964086 AGTTTAGATTAAGGGAGGGTGTTAGA 59.036 38.462 0.00 0.00 0.00 2.10
4370 5021 8.865244 ATAGTTTAGATTAAGGGAGGGTGTTA 57.135 34.615 0.00 0.00 0.00 2.41
4372 5023 6.329460 GGATAGTTTAGATTAAGGGAGGGTGT 59.671 42.308 0.00 0.00 0.00 4.16
4373 5024 6.559157 AGGATAGTTTAGATTAAGGGAGGGTG 59.441 42.308 0.00 0.00 0.00 4.61
4374 5025 6.704792 AGGATAGTTTAGATTAAGGGAGGGT 58.295 40.000 0.00 0.00 0.00 4.34
4375 5026 8.763601 CATAGGATAGTTTAGATTAAGGGAGGG 58.236 40.741 0.00 0.00 0.00 4.30
4376 5027 9.327731 ACATAGGATAGTTTAGATTAAGGGAGG 57.672 37.037 0.00 0.00 0.00 4.30
4391 5042 9.206690 TCAAGAGAAATCTCAACATAGGATAGT 57.793 33.333 12.65 0.00 45.21 2.12
4393 5044 9.823647 GTTCAAGAGAAATCTCAACATAGGATA 57.176 33.333 12.65 0.00 45.21 2.59
4415 5066 5.220970 CCGGTTAAGCTTTTTGAAGAGTTCA 60.221 40.000 3.20 0.00 38.04 3.18
4416 5067 5.212934 CCGGTTAAGCTTTTTGAAGAGTTC 58.787 41.667 3.20 0.00 0.00 3.01
4419 5070 3.004315 TGCCGGTTAAGCTTTTTGAAGAG 59.996 43.478 3.20 0.00 0.00 2.85
4420 5071 2.952978 TGCCGGTTAAGCTTTTTGAAGA 59.047 40.909 3.20 0.00 0.00 2.87
4421 5072 3.363341 TGCCGGTTAAGCTTTTTGAAG 57.637 42.857 3.20 0.00 0.00 3.02
4423 5074 2.035321 CCTTGCCGGTTAAGCTTTTTGA 59.965 45.455 3.20 0.00 0.00 2.69
4424 5075 2.403259 CCTTGCCGGTTAAGCTTTTTG 58.597 47.619 3.20 0.00 0.00 2.44
4425 5076 1.270094 GCCTTGCCGGTTAAGCTTTTT 60.270 47.619 3.20 0.00 34.25 1.94
4426 5077 0.317160 GCCTTGCCGGTTAAGCTTTT 59.683 50.000 3.20 0.00 34.25 2.27
4427 5078 0.539669 AGCCTTGCCGGTTAAGCTTT 60.540 50.000 3.20 0.00 34.25 3.51
4428 5079 0.539669 AAGCCTTGCCGGTTAAGCTT 60.540 50.000 15.28 15.28 34.25 3.74
4431 5082 2.161609 CACTAAAGCCTTGCCGGTTAAG 59.838 50.000 1.90 8.49 34.25 1.85
4433 5084 1.348366 TCACTAAAGCCTTGCCGGTTA 59.652 47.619 1.90 0.00 34.25 2.85
4434 5085 0.109723 TCACTAAAGCCTTGCCGGTT 59.890 50.000 1.90 0.00 34.25 4.44
4435 5086 0.109723 TTCACTAAAGCCTTGCCGGT 59.890 50.000 1.90 0.00 34.25 5.28
4436 5087 0.521735 GTTCACTAAAGCCTTGCCGG 59.478 55.000 0.00 0.00 0.00 6.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.