Multiple sequence alignment - TraesCS6A01G008300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G008300 chr6A 100.000 4501 0 0 1 4501 3329632 3325132 0.000000e+00 8312.0
1 TraesCS6A01G008300 chr6A 84.456 1306 171 22 2298 3582 1335853 1334559 0.000000e+00 1258.0
2 TraesCS6A01G008300 chr6A 83.516 91 7 3 610 698 1339387 1339303 1.340000e-10 78.7
3 TraesCS6A01G008300 chr6B 95.611 2438 78 16 1769 4185 35722179 35719750 0.000000e+00 3882.0
4 TraesCS6A01G008300 chr6B 96.531 1499 41 4 275 1773 35723696 35722209 0.000000e+00 2470.0
5 TraesCS6A01G008300 chr6B 89.925 1062 105 2 2458 3518 2400480 2401540 0.000000e+00 1367.0
6 TraesCS6A01G008300 chr6B 81.614 223 37 2 1553 1772 2308162 2307941 9.950000e-42 182.0
7 TraesCS6A01G008300 chr6B 78.146 302 53 9 1168 1467 6338220 6338510 3.580000e-41 180.0
8 TraesCS6A01G008300 chr6B 81.106 217 32 7 1553 1764 5791842 5792054 1.000000e-36 165.0
9 TraesCS6A01G008300 chr6B 88.976 127 5 4 154 280 35724050 35723933 1.010000e-31 148.0
10 TraesCS6A01G008300 chr6B 86.885 61 4 3 2060 2118 175346035 175346093 1.050000e-06 65.8
11 TraesCS6A01G008300 chr4D 88.787 1195 123 8 2334 3520 19753361 19752170 0.000000e+00 1454.0
12 TraesCS6A01G008300 chr4D 88.703 1195 124 8 2334 3520 19783300 19784491 0.000000e+00 1448.0
13 TraesCS6A01G008300 chr4D 81.333 225 31 9 1553 1772 19753923 19753705 5.990000e-39 172.0
14 TraesCS6A01G008300 chr4D 81.333 225 31 9 1553 1772 19782738 19782956 5.990000e-39 172.0
15 TraesCS6A01G008300 chr4D 81.463 205 26 8 2060 2257 294346471 294346272 1.680000e-34 158.0
16 TraesCS6A01G008300 chr6D 88.211 1196 128 10 2334 3520 604160 602969 0.000000e+00 1415.0
17 TraesCS6A01G008300 chr6D 81.395 215 31 7 1555 1764 1490241 1490451 2.790000e-37 167.0
18 TraesCS6A01G008300 chr6D 81.517 211 27 7 2057 2257 310399516 310399724 3.600000e-36 163.0
19 TraesCS6A01G008300 chrUn 90.797 1054 96 1 2475 3527 252682538 252681485 0.000000e+00 1408.0
20 TraesCS6A01G008300 chrUn 88.310 1189 120 12 2355 3527 260288746 260289931 0.000000e+00 1408.0
21 TraesCS6A01G008300 chrUn 80.333 300 52 5 1170 1467 252683603 252683309 2.110000e-53 220.0
22 TraesCS6A01G008300 chrUn 80.333 300 52 5 1170 1467 260287813 260288107 2.110000e-53 220.0
23 TraesCS6A01G008300 chrUn 85.475 179 26 0 1576 1754 228624166 228624344 2.140000e-43 187.0
24 TraesCS6A01G008300 chr4A 86.261 1201 150 10 2325 3512 744537240 744536042 0.000000e+00 1290.0
25 TraesCS6A01G008300 chr4A 88.889 144 15 1 4300 4442 563266136 563265993 4.630000e-40 176.0
26 TraesCS6A01G008300 chr4A 88.194 144 16 1 4300 4442 563297112 563296969 2.150000e-38 171.0
27 TraesCS6A01G008300 chr3D 84.615 208 26 3 4300 4501 613445321 613445528 7.630000e-48 202.0
28 TraesCS6A01G008300 chr7A 84.848 198 27 1 1577 1771 345860 345663 3.550000e-46 196.0
29 TraesCS6A01G008300 chr7A 100.000 28 0 0 1 28 724648292 724648319 8.000000e-03 52.8
30 TraesCS6A01G008300 chr2B 85.475 179 26 0 1576 1754 755627909 755628087 2.140000e-43 187.0
31 TraesCS6A01G008300 chr2B 80.097 206 32 6 2060 2257 98359921 98359717 1.300000e-30 145.0
32 TraesCS6A01G008300 chr2B 94.286 35 0 2 4 38 116429053 116429021 8.000000e-03 52.8
33 TraesCS6A01G008300 chr1B 78.477 302 52 9 1168 1467 29923783 29924073 7.690000e-43 185.0
34 TraesCS6A01G008300 chr1B 86.517 89 6 2 610 698 635977029 635977111 4.790000e-15 93.5
35 TraesCS6A01G008300 chr2D 89.583 144 14 1 4300 4442 612532279 612532136 9.950000e-42 182.0
36 TraesCS6A01G008300 chr2D 80.660 212 24 11 2060 2257 62954466 62954258 1.010000e-31 148.0
37 TraesCS6A01G008300 chr2A 80.769 208 29 8 2060 2257 63822901 63822695 7.800000e-33 152.0
38 TraesCS6A01G008300 chr3A 77.397 146 28 3 2062 2203 473721218 473721362 1.040000e-11 82.4
39 TraesCS6A01G008300 chr1D 91.837 49 3 1 4202 4249 287170910 287170862 2.910000e-07 67.6
40 TraesCS6A01G008300 chr3B 94.444 36 2 0 1 36 562061631 562061596 6.290000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G008300 chr6A 3325132 3329632 4500 True 8312.000000 8312 100.0000 1 4501 1 chr6A.!!$R1 4500
1 TraesCS6A01G008300 chr6A 1334559 1339387 4828 True 668.350000 1258 83.9860 610 3582 2 chr6A.!!$R2 2972
2 TraesCS6A01G008300 chr6B 35719750 35724050 4300 True 2166.666667 3882 93.7060 154 4185 3 chr6B.!!$R2 4031
3 TraesCS6A01G008300 chr6B 2400480 2401540 1060 False 1367.000000 1367 89.9250 2458 3518 1 chr6B.!!$F1 1060
4 TraesCS6A01G008300 chr4D 19752170 19753923 1753 True 813.000000 1454 85.0600 1553 3520 2 chr4D.!!$R2 1967
5 TraesCS6A01G008300 chr4D 19782738 19784491 1753 False 810.000000 1448 85.0180 1553 3520 2 chr4D.!!$F1 1967
6 TraesCS6A01G008300 chr6D 602969 604160 1191 True 1415.000000 1415 88.2110 2334 3520 1 chr6D.!!$R1 1186
7 TraesCS6A01G008300 chrUn 252681485 252683603 2118 True 814.000000 1408 85.5650 1170 3527 2 chrUn.!!$R1 2357
8 TraesCS6A01G008300 chrUn 260287813 260289931 2118 False 814.000000 1408 84.3215 1170 3527 2 chrUn.!!$F2 2357
9 TraesCS6A01G008300 chr4A 744536042 744537240 1198 True 1290.000000 1290 86.2610 2325 3512 1 chr4A.!!$R3 1187

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
562 805 0.035152 TGCCAGTGCCAGTAATCCTG 60.035 55.000 0.00 0.00 41.15 3.86 F
755 1000 0.319900 CAAGTACGTCAGGCAGCAGT 60.320 55.000 0.00 0.00 0.00 4.40 F
869 1150 0.396435 CTCCTACCACTGCAACACCA 59.604 55.000 0.00 0.00 0.00 4.17 F
966 1247 1.000521 TTCTCATGGGCCTTGGCTG 60.001 57.895 18.35 9.80 0.00 4.85 F
1367 1669 1.376424 GCCTCAGCAGCAACAGCTA 60.376 57.895 0.00 0.00 41.14 3.32 F
1924 2819 2.309136 ATGCTGCCAAAAAGGTACCT 57.691 45.000 9.21 9.21 40.61 3.08 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1815 2424 2.484417 CGGCTTCATGGAGCTACTGAAT 60.484 50.000 25.16 0.00 42.32 2.57 R
2597 5224 2.360225 GGGCCGCCGTTCCTTTTA 60.360 61.111 2.55 0.00 0.00 1.52 R
2648 5275 4.032960 TGGCTTGAGCTCATCCTTTTTA 57.967 40.909 26.30 10.94 41.70 1.52 R
2924 5551 6.586082 CCACCTTGTTATTGTTATTGTGAAGC 59.414 38.462 0.00 0.00 0.00 3.86 R
3301 5928 9.868277 TTTGTTTCTTATGAGCTTCAAGAAAAA 57.132 25.926 22.29 17.88 45.10 1.94 R
3591 6219 1.133025 AGGCAGCATACAAACATTCGC 59.867 47.619 0.00 0.00 0.00 4.70 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 9.088987 TGCATGATACTAGTTATGATACTTCCA 57.911 33.333 0.00 0.00 0.00 3.53
31 32 9.360093 GCATGATACTAGTTATGATACTTCCAC 57.640 37.037 0.00 0.00 0.00 4.02
42 43 9.425577 GTTATGATACTTCCACTTTAGATAGGC 57.574 37.037 0.00 0.00 0.00 3.93
43 44 7.863901 ATGATACTTCCACTTTAGATAGGCT 57.136 36.000 0.00 0.00 0.00 4.58
44 45 7.676683 TGATACTTCCACTTTAGATAGGCTT 57.323 36.000 0.00 0.00 0.00 4.35
45 46 8.777578 TGATACTTCCACTTTAGATAGGCTTA 57.222 34.615 0.00 0.00 0.00 3.09
46 47 8.861086 TGATACTTCCACTTTAGATAGGCTTAG 58.139 37.037 0.00 0.00 0.00 2.18
47 48 9.080097 GATACTTCCACTTTAGATAGGCTTAGA 57.920 37.037 0.00 0.00 0.00 2.10
48 49 7.735326 ACTTCCACTTTAGATAGGCTTAGAA 57.265 36.000 0.00 0.00 0.00 2.10
49 50 8.147244 ACTTCCACTTTAGATAGGCTTAGAAA 57.853 34.615 0.00 0.00 0.00 2.52
50 51 8.773216 ACTTCCACTTTAGATAGGCTTAGAAAT 58.227 33.333 0.00 0.00 0.00 2.17
53 54 9.435570 TCCACTTTAGATAGGCTTAGAAATACT 57.564 33.333 0.00 0.00 0.00 2.12
54 55 9.482627 CCACTTTAGATAGGCTTAGAAATACTG 57.517 37.037 0.00 0.00 0.00 2.74
63 64 7.379098 AGGCTTAGAAATACTGTTGTTTAGC 57.621 36.000 0.00 0.00 0.00 3.09
64 65 7.168905 AGGCTTAGAAATACTGTTGTTTAGCT 58.831 34.615 0.00 0.00 0.00 3.32
65 66 7.665974 AGGCTTAGAAATACTGTTGTTTAGCTT 59.334 33.333 0.00 0.00 0.00 3.74
66 67 7.750903 GGCTTAGAAATACTGTTGTTTAGCTTG 59.249 37.037 0.00 0.00 0.00 4.01
67 68 8.290325 GCTTAGAAATACTGTTGTTTAGCTTGT 58.710 33.333 0.00 0.00 0.00 3.16
68 69 9.599322 CTTAGAAATACTGTTGTTTAGCTTGTG 57.401 33.333 0.00 0.00 0.00 3.33
69 70 7.568199 AGAAATACTGTTGTTTAGCTTGTGT 57.432 32.000 0.00 0.00 0.00 3.72
70 71 7.417612 AGAAATACTGTTGTTTAGCTTGTGTG 58.582 34.615 0.00 0.00 0.00 3.82
71 72 6.935741 AATACTGTTGTTTAGCTTGTGTGA 57.064 33.333 0.00 0.00 0.00 3.58
72 73 4.616181 ACTGTTGTTTAGCTTGTGTGAC 57.384 40.909 0.00 0.00 0.00 3.67
73 74 3.063452 ACTGTTGTTTAGCTTGTGTGACG 59.937 43.478 0.00 0.00 0.00 4.35
74 75 3.004171 TGTTGTTTAGCTTGTGTGACGT 58.996 40.909 0.00 0.00 0.00 4.34
75 76 3.437395 TGTTGTTTAGCTTGTGTGACGTT 59.563 39.130 0.00 0.00 0.00 3.99
76 77 3.936902 TGTTTAGCTTGTGTGACGTTC 57.063 42.857 0.00 0.00 0.00 3.95
77 78 3.527533 TGTTTAGCTTGTGTGACGTTCT 58.472 40.909 0.00 0.00 0.00 3.01
78 79 3.936453 TGTTTAGCTTGTGTGACGTTCTT 59.064 39.130 0.00 0.00 0.00 2.52
79 80 4.393680 TGTTTAGCTTGTGTGACGTTCTTT 59.606 37.500 0.00 0.00 0.00 2.52
80 81 5.106475 TGTTTAGCTTGTGTGACGTTCTTTT 60.106 36.000 0.00 0.00 0.00 2.27
81 82 3.405170 AGCTTGTGTGACGTTCTTTTG 57.595 42.857 0.00 0.00 0.00 2.44
82 83 1.846175 GCTTGTGTGACGTTCTTTTGC 59.154 47.619 0.00 0.00 0.00 3.68
83 84 2.477863 GCTTGTGTGACGTTCTTTTGCT 60.478 45.455 0.00 0.00 0.00 3.91
84 85 3.354397 CTTGTGTGACGTTCTTTTGCTC 58.646 45.455 0.00 0.00 0.00 4.26
85 86 2.351455 TGTGTGACGTTCTTTTGCTCA 58.649 42.857 0.00 0.00 0.00 4.26
86 87 2.744741 TGTGTGACGTTCTTTTGCTCAA 59.255 40.909 0.00 0.00 0.00 3.02
87 88 3.189495 TGTGTGACGTTCTTTTGCTCAAA 59.811 39.130 0.00 0.00 0.00 2.69
88 89 4.162812 GTGTGACGTTCTTTTGCTCAAAA 58.837 39.130 7.46 7.46 37.90 2.44
89 90 4.619336 GTGTGACGTTCTTTTGCTCAAAAA 59.381 37.500 8.83 0.00 39.49 1.94
101 102 6.799926 TTTGCTCAAAAAGAAAAAGCTTGT 57.200 29.167 0.00 0.00 28.88 3.16
102 103 5.783100 TGCTCAAAAAGAAAAAGCTTGTG 57.217 34.783 0.00 0.00 34.11 3.33
103 104 5.237048 TGCTCAAAAAGAAAAAGCTTGTGT 58.763 33.333 0.00 0.00 34.11 3.72
104 105 5.120519 TGCTCAAAAAGAAAAAGCTTGTGTG 59.879 36.000 0.00 0.00 34.11 3.82
105 106 5.348451 GCTCAAAAAGAAAAAGCTTGTGTGA 59.652 36.000 0.00 0.00 0.00 3.58
106 107 6.670689 GCTCAAAAAGAAAAAGCTTGTGTGAC 60.671 38.462 0.00 0.00 0.00 3.67
107 108 5.344665 TCAAAAAGAAAAAGCTTGTGTGACG 59.655 36.000 0.00 0.00 0.00 4.35
108 109 4.434713 AAAGAAAAAGCTTGTGTGACGT 57.565 36.364 0.00 0.00 0.00 4.34
109 110 3.405170 AGAAAAAGCTTGTGTGACGTG 57.595 42.857 0.00 0.00 0.00 4.49
110 111 3.006940 AGAAAAAGCTTGTGTGACGTGA 58.993 40.909 0.00 0.00 0.00 4.35
111 112 3.627577 AGAAAAAGCTTGTGTGACGTGAT 59.372 39.130 0.00 0.00 0.00 3.06
112 113 3.338818 AAAAGCTTGTGTGACGTGATG 57.661 42.857 0.00 0.00 0.00 3.07
113 114 2.238942 AAGCTTGTGTGACGTGATGA 57.761 45.000 0.00 0.00 0.00 2.92
114 115 2.238942 AGCTTGTGTGACGTGATGAA 57.761 45.000 0.00 0.00 0.00 2.57
115 116 2.138320 AGCTTGTGTGACGTGATGAAG 58.862 47.619 0.00 0.00 0.00 3.02
116 117 1.195448 GCTTGTGTGACGTGATGAAGG 59.805 52.381 0.00 0.00 0.00 3.46
117 118 2.483876 CTTGTGTGACGTGATGAAGGT 58.516 47.619 0.00 0.00 0.00 3.50
118 119 3.649073 CTTGTGTGACGTGATGAAGGTA 58.351 45.455 0.00 0.00 0.00 3.08
119 120 3.953712 TGTGTGACGTGATGAAGGTAT 57.046 42.857 0.00 0.00 0.00 2.73
120 121 4.265904 TGTGTGACGTGATGAAGGTATT 57.734 40.909 0.00 0.00 0.00 1.89
121 122 4.637276 TGTGTGACGTGATGAAGGTATTT 58.363 39.130 0.00 0.00 0.00 1.40
122 123 5.060506 TGTGTGACGTGATGAAGGTATTTT 58.939 37.500 0.00 0.00 0.00 1.82
123 124 5.049749 TGTGTGACGTGATGAAGGTATTTTG 60.050 40.000 0.00 0.00 0.00 2.44
124 125 5.049680 GTGTGACGTGATGAAGGTATTTTGT 60.050 40.000 0.00 0.00 0.00 2.83
125 126 5.049749 TGTGACGTGATGAAGGTATTTTGTG 60.050 40.000 0.00 0.00 0.00 3.33
126 127 4.454161 TGACGTGATGAAGGTATTTTGTGG 59.546 41.667 0.00 0.00 0.00 4.17
127 128 4.647611 ACGTGATGAAGGTATTTTGTGGA 58.352 39.130 0.00 0.00 0.00 4.02
128 129 5.067273 ACGTGATGAAGGTATTTTGTGGAA 58.933 37.500 0.00 0.00 0.00 3.53
129 130 5.181245 ACGTGATGAAGGTATTTTGTGGAAG 59.819 40.000 0.00 0.00 0.00 3.46
130 131 5.402398 GTGATGAAGGTATTTTGTGGAAGC 58.598 41.667 0.00 0.00 0.00 3.86
131 132 5.048083 GTGATGAAGGTATTTTGTGGAAGCA 60.048 40.000 0.00 0.00 0.00 3.91
132 133 5.538053 TGATGAAGGTATTTTGTGGAAGCAA 59.462 36.000 0.00 0.00 0.00 3.91
133 134 5.195001 TGAAGGTATTTTGTGGAAGCAAC 57.805 39.130 0.00 0.00 0.00 4.17
134 135 4.038642 TGAAGGTATTTTGTGGAAGCAACC 59.961 41.667 0.00 0.00 0.00 3.77
135 136 3.571590 AGGTATTTTGTGGAAGCAACCA 58.428 40.909 0.00 0.00 37.63 3.67
136 137 3.573967 AGGTATTTTGTGGAAGCAACCAG 59.426 43.478 2.13 0.00 40.85 4.00
137 138 3.572255 GGTATTTTGTGGAAGCAACCAGA 59.428 43.478 2.13 0.00 40.85 3.86
138 139 4.321230 GGTATTTTGTGGAAGCAACCAGAG 60.321 45.833 2.13 0.00 40.85 3.35
139 140 2.435372 TTTGTGGAAGCAACCAGAGT 57.565 45.000 2.13 0.00 40.85 3.24
140 141 1.679139 TTGTGGAAGCAACCAGAGTG 58.321 50.000 2.13 0.00 40.85 3.51
141 142 0.819259 TGTGGAAGCAACCAGAGTGC 60.819 55.000 2.13 0.00 40.85 4.40
142 143 1.228245 TGGAAGCAACCAGAGTGCC 60.228 57.895 0.00 0.00 34.77 5.01
143 144 2.328099 GGAAGCAACCAGAGTGCCG 61.328 63.158 0.00 0.00 0.00 5.69
144 145 1.301716 GAAGCAACCAGAGTGCCGA 60.302 57.895 0.00 0.00 0.00 5.54
145 146 0.674895 GAAGCAACCAGAGTGCCGAT 60.675 55.000 0.00 0.00 0.00 4.18
146 147 0.957395 AAGCAACCAGAGTGCCGATG 60.957 55.000 0.00 0.00 0.00 3.84
147 148 2.401766 GCAACCAGAGTGCCGATGG 61.402 63.158 0.00 0.00 40.10 3.51
148 149 1.746615 CAACCAGAGTGCCGATGGG 60.747 63.158 0.00 0.00 38.48 4.00
149 150 1.918293 AACCAGAGTGCCGATGGGA 60.918 57.895 0.00 0.00 38.48 4.37
150 151 1.903877 AACCAGAGTGCCGATGGGAG 61.904 60.000 0.00 0.00 38.48 4.30
151 152 2.060383 CCAGAGTGCCGATGGGAGA 61.060 63.158 0.00 0.00 34.06 3.71
152 153 1.406065 CCAGAGTGCCGATGGGAGAT 61.406 60.000 0.00 0.00 34.06 2.75
165 166 1.347062 GGGAGATAGCTCAGGGGAAG 58.653 60.000 10.68 0.00 43.14 3.46
216 217 4.028852 TGTCTGGATACGTTGATTCTCG 57.971 45.455 0.00 0.00 42.51 4.04
224 225 3.752412 ACGTTGATTCTCGTCACGATA 57.248 42.857 0.00 0.00 35.30 2.92
227 228 3.061797 CGTTGATTCTCGTCACGATAAGC 60.062 47.826 0.00 2.99 34.61 3.09
229 230 4.307443 TGATTCTCGTCACGATAAGCAT 57.693 40.909 11.73 0.00 34.55 3.79
230 231 4.290969 TGATTCTCGTCACGATAAGCATC 58.709 43.478 11.73 1.93 34.55 3.91
231 232 3.775661 TTCTCGTCACGATAAGCATCA 57.224 42.857 0.00 0.00 34.61 3.07
232 233 3.990318 TCTCGTCACGATAAGCATCAT 57.010 42.857 0.00 0.00 34.61 2.45
233 234 3.632189 TCTCGTCACGATAAGCATCATG 58.368 45.455 0.00 0.00 34.61 3.07
234 235 3.066760 TCTCGTCACGATAAGCATCATGT 59.933 43.478 0.00 0.00 34.61 3.21
252 253 2.623535 TGTTCATGTGGCCGTGTATAC 58.376 47.619 0.00 0.00 0.00 1.47
253 254 2.028020 TGTTCATGTGGCCGTGTATACA 60.028 45.455 0.08 0.08 0.00 2.29
254 255 3.202906 GTTCATGTGGCCGTGTATACAT 58.797 45.455 9.18 0.00 34.31 2.29
317 560 2.484594 GGAGATAAGGAGAGGCAACAGC 60.485 54.545 0.00 0.00 41.41 4.40
328 571 1.066573 AGGCAACAGCAGTAGTAGCAG 60.067 52.381 0.00 0.00 41.41 4.24
364 607 2.289547 TCGGTAGACTTTTGCAAGTTGC 59.710 45.455 21.17 21.17 43.79 4.17
414 657 4.961438 ATTCTTGTGGAAGCAACCAAAT 57.039 36.364 3.52 0.00 41.87 2.32
422 665 1.815817 AAGCAACCAAATGGCCGACC 61.816 55.000 0.00 0.00 39.32 4.79
562 805 0.035152 TGCCAGTGCCAGTAATCCTG 60.035 55.000 0.00 0.00 41.15 3.86
578 821 1.089920 CCTGGTTCTCATCTTTGCCG 58.910 55.000 0.00 0.00 0.00 5.69
579 822 0.449388 CTGGTTCTCATCTTTGCCGC 59.551 55.000 0.00 0.00 0.00 6.53
583 826 4.228097 CTCATCTTTGCCGCGGCG 62.228 66.667 41.73 29.15 45.51 6.46
755 1000 0.319900 CAAGTACGTCAGGCAGCAGT 60.320 55.000 0.00 0.00 0.00 4.40
826 1107 3.847621 CGTATCAGTCGCTACAGGG 57.152 57.895 0.00 0.00 0.00 4.45
868 1149 0.685097 TCTCCTACCACTGCAACACC 59.315 55.000 0.00 0.00 0.00 4.16
869 1150 0.396435 CTCCTACCACTGCAACACCA 59.604 55.000 0.00 0.00 0.00 4.17
966 1247 1.000521 TTCTCATGGGCCTTGGCTG 60.001 57.895 18.35 9.80 0.00 4.85
967 1248 2.441532 CTCATGGGCCTTGGCTGG 60.442 66.667 18.35 4.40 0.00 4.85
968 1249 2.940467 TCATGGGCCTTGGCTGGA 60.940 61.111 18.35 0.00 0.00 3.86
969 1250 2.757099 CATGGGCCTTGGCTGGAC 60.757 66.667 11.46 0.00 0.00 4.02
1038 1319 1.938625 TGTTTGCTTGCCTTGCTTTC 58.061 45.000 0.00 0.00 0.00 2.62
1367 1669 1.376424 GCCTCAGCAGCAACAGCTA 60.376 57.895 0.00 0.00 41.14 3.32
1732 2065 4.158579 TGCACAGATATATTCCCTCTAGCG 59.841 45.833 0.00 0.00 0.00 4.26
1775 2380 4.512198 AGCTACTACTACACTGCACTATCG 59.488 45.833 0.00 0.00 0.00 2.92
1790 2399 6.391537 TGCACTATCGTAGAAACACATGTAA 58.608 36.000 0.00 0.00 43.58 2.41
1793 2402 7.274904 GCACTATCGTAGAAACACATGTAAGAA 59.725 37.037 0.00 0.00 43.58 2.52
1797 2406 8.827177 ATCGTAGAAACACATGTAAGAAAAGA 57.173 30.769 0.00 0.00 43.58 2.52
1924 2819 2.309136 ATGCTGCCAAAAAGGTACCT 57.691 45.000 9.21 9.21 40.61 3.08
2049 4611 6.699575 ATTTATGTGAATGTCCTTACTGCC 57.300 37.500 0.00 0.00 0.00 4.85
2064 4626 6.155565 TCCTTACTGCCATTTACAAGCTACTA 59.844 38.462 0.00 0.00 0.00 1.82
2084 4646 8.398665 GCTACTACCTCTGTTCCAAAATAATTG 58.601 37.037 0.00 0.00 0.00 2.32
2104 4666 4.079980 TGAAGTTCTGGATTTGTCCGAA 57.920 40.909 4.17 0.00 0.00 4.30
2235 4797 8.006298 TGGTTTTGTAGATCTTCACACATTTT 57.994 30.769 0.00 0.00 0.00 1.82
2648 5275 7.219322 AGAAGGCAAATGTGATTAAGCTTTTT 58.781 30.769 3.20 0.00 0.00 1.94
3591 6219 1.107945 AACCGTGTTTTGAAGGTGGG 58.892 50.000 0.00 0.00 37.03 4.61
3595 6223 0.741915 GTGTTTTGAAGGTGGGCGAA 59.258 50.000 0.00 0.00 0.00 4.70
3634 6262 3.079578 TGTAACCGTGTTTCAAACCACA 58.920 40.909 0.00 0.00 0.00 4.17
3636 6264 3.662247 AACCGTGTTTCAAACCACAAA 57.338 38.095 0.00 0.00 0.00 2.83
3646 6286 6.934645 TGTTTCAAACCACAAATTTGTAACCA 59.065 30.769 22.87 9.09 42.22 3.67
3699 6339 8.651588 CAGAGTATGTACAGTTTCAATGAACTC 58.348 37.037 0.33 0.00 37.76 3.01
3712 6352 8.592998 GTTTCAATGAACTCTATAGGTTGTACG 58.407 37.037 10.26 0.00 0.00 3.67
3755 6395 2.239400 GCCCTCACTTTGGCTTAAGTT 58.761 47.619 4.02 0.00 44.46 2.66
3772 6412 3.715628 AGTTTTGGCTGCTGTTTACTG 57.284 42.857 0.00 0.00 0.00 2.74
3782 6422 4.092675 GCTGCTGTTTACTGAGAAGTGATC 59.907 45.833 0.00 0.00 0.00 2.92
3786 6426 7.386059 TGCTGTTTACTGAGAAGTGATCAATA 58.614 34.615 0.00 0.00 0.00 1.90
3790 6430 6.867519 TTACTGAGAAGTGATCAATACCCA 57.132 37.500 0.00 0.00 0.00 4.51
3797 6437 2.852449 AGTGATCAATACCCACCCATGT 59.148 45.455 0.00 0.00 0.00 3.21
3813 6453 7.096551 CCACCCATGTTGTTATTCCTTTAAAG 58.903 38.462 8.32 8.32 0.00 1.85
3814 6454 6.589907 CACCCATGTTGTTATTCCTTTAAAGC 59.410 38.462 9.86 0.00 0.00 3.51
3819 6459 8.915654 CATGTTGTTATTCCTTTAAAGCTTGTC 58.084 33.333 9.86 0.00 0.00 3.18
3881 6521 1.123077 TGTGGAGGGCACATAGCTAG 58.877 55.000 0.00 0.00 44.79 3.42
3893 6533 7.661847 AGGGCACATAGCTAGTAAAATATGTTC 59.338 37.037 0.00 0.00 44.79 3.18
3901 6541 7.731054 AGCTAGTAAAATATGTTCCTCCAGAG 58.269 38.462 0.00 0.00 0.00 3.35
3920 6560 7.261325 TCCAGAGATAAAGTCTTTTGAGATCG 58.739 38.462 2.51 0.00 37.29 3.69
3964 6604 7.180229 TGAAGGGACAACTCTAGTGAAATGATA 59.820 37.037 0.00 0.00 0.00 2.15
3965 6605 6.879400 AGGGACAACTCTAGTGAAATGATAC 58.121 40.000 0.00 0.00 0.00 2.24
3966 6606 6.440647 AGGGACAACTCTAGTGAAATGATACA 59.559 38.462 0.00 0.00 0.00 2.29
3967 6607 6.758886 GGGACAACTCTAGTGAAATGATACAG 59.241 42.308 0.00 0.00 0.00 2.74
3986 6627 9.379770 TGATACAGGATAATACCTTTCATCTCA 57.620 33.333 0.00 0.00 38.32 3.27
4046 6687 7.596248 CCGCATAGCTTATTTATCAAAAATGCT 59.404 33.333 0.00 0.00 32.74 3.79
4047 6688 9.611284 CGCATAGCTTATTTATCAAAAATGCTA 57.389 29.630 0.00 0.00 32.74 3.49
4056 6697 8.633075 ATTTATCAAAAATGCTACATCAACGG 57.367 30.769 0.00 0.00 0.00 4.44
4057 6698 5.895636 ATCAAAAATGCTACATCAACGGA 57.104 34.783 0.00 0.00 0.00 4.69
4058 6699 5.895636 TCAAAAATGCTACATCAACGGAT 57.104 34.783 0.00 0.00 0.00 4.18
4078 6719 5.447818 CGGATGATTACAGAGAAAAGCCAAC 60.448 44.000 0.00 0.00 0.00 3.77
4132 6773 0.322546 ATTTCGGGTCTGGGTCTTGC 60.323 55.000 0.00 0.00 0.00 4.01
4152 6795 7.064728 GTCTTGCTTCCCACTAATAACTAACTG 59.935 40.741 0.00 0.00 0.00 3.16
4164 6807 8.565416 ACTAATAACTAACTGAAAAACTGCCAC 58.435 33.333 0.00 0.00 0.00 5.01
4172 6815 3.826157 CTGAAAAACTGCCACCTAATCCA 59.174 43.478 0.00 0.00 0.00 3.41
4185 6828 2.163613 CCTAATCCAAGCCCGTGAAAAC 59.836 50.000 0.00 0.00 0.00 2.43
4186 6829 0.966179 AATCCAAGCCCGTGAAAACC 59.034 50.000 0.00 0.00 0.00 3.27
4187 6830 0.178975 ATCCAAGCCCGTGAAAACCA 60.179 50.000 0.00 0.00 0.00 3.67
4188 6831 0.178975 TCCAAGCCCGTGAAAACCAT 60.179 50.000 0.00 0.00 0.00 3.55
4189 6832 0.243636 CCAAGCCCGTGAAAACCATC 59.756 55.000 0.00 0.00 0.00 3.51
4190 6833 0.958091 CAAGCCCGTGAAAACCATCA 59.042 50.000 0.00 0.00 0.00 3.07
4191 6834 1.545582 CAAGCCCGTGAAAACCATCAT 59.454 47.619 0.00 0.00 0.00 2.45
4192 6835 1.176527 AGCCCGTGAAAACCATCATG 58.823 50.000 0.00 0.00 36.33 3.07
4193 6836 0.887933 GCCCGTGAAAACCATCATGT 59.112 50.000 0.00 0.00 35.07 3.21
4194 6837 1.272212 GCCCGTGAAAACCATCATGTT 59.728 47.619 0.00 0.00 35.07 2.71
4195 6838 2.288763 GCCCGTGAAAACCATCATGTTT 60.289 45.455 0.00 0.00 40.05 2.83
4196 6839 3.057174 GCCCGTGAAAACCATCATGTTTA 60.057 43.478 0.00 0.00 37.46 2.01
4197 6840 4.381505 GCCCGTGAAAACCATCATGTTTAT 60.382 41.667 0.00 0.00 37.46 1.40
4198 6841 5.339990 CCCGTGAAAACCATCATGTTTATC 58.660 41.667 0.00 0.00 37.46 1.75
4199 6842 5.339990 CCGTGAAAACCATCATGTTTATCC 58.660 41.667 0.00 0.00 37.46 2.59
4200 6843 5.105957 CCGTGAAAACCATCATGTTTATCCA 60.106 40.000 0.00 0.00 37.46 3.41
4201 6844 6.405731 CCGTGAAAACCATCATGTTTATCCAT 60.406 38.462 0.00 0.00 37.46 3.41
4202 6845 7.035004 CGTGAAAACCATCATGTTTATCCATT 58.965 34.615 0.00 0.00 37.46 3.16
4203 6846 7.545265 CGTGAAAACCATCATGTTTATCCATTT 59.455 33.333 0.00 0.00 37.46 2.32
4204 6847 9.868277 GTGAAAACCATCATGTTTATCCATTTA 57.132 29.630 0.00 0.00 37.46 1.40
4223 6866 9.502091 TCCATTTATACATACTAGGAAACATGC 57.498 33.333 0.00 0.00 0.00 4.06
4224 6867 8.730680 CCATTTATACATACTAGGAAACATGCC 58.269 37.037 0.00 0.00 0.00 4.40
4225 6868 9.507329 CATTTATACATACTAGGAAACATGCCT 57.493 33.333 0.00 0.00 39.56 4.75
4226 6869 8.902540 TTTATACATACTAGGAAACATGCCTG 57.097 34.615 0.00 0.00 36.96 4.85
4227 6870 4.844349 ACATACTAGGAAACATGCCTGT 57.156 40.909 0.00 0.00 36.96 4.00
4228 6871 4.517285 ACATACTAGGAAACATGCCTGTG 58.483 43.478 0.00 0.00 36.96 3.66
4229 6872 1.826385 ACTAGGAAACATGCCTGTGC 58.174 50.000 0.00 0.00 36.96 4.57
4230 6873 0.729116 CTAGGAAACATGCCTGTGCG 59.271 55.000 0.00 0.00 41.78 5.34
4231 6874 0.036164 TAGGAAACATGCCTGTGCGT 59.964 50.000 0.00 0.00 41.78 5.24
4232 6875 0.823356 AGGAAACATGCCTGTGCGTT 60.823 50.000 0.00 0.00 41.78 4.84
4233 6876 0.664166 GGAAACATGCCTGTGCGTTG 60.664 55.000 0.00 0.00 41.78 4.10
4234 6877 1.277495 GAAACATGCCTGTGCGTTGC 61.277 55.000 0.00 0.00 41.78 4.17
4235 6878 2.014064 AAACATGCCTGTGCGTTGCA 62.014 50.000 0.00 0.00 41.78 4.08
4236 6879 2.014064 AACATGCCTGTGCGTTGCAA 62.014 50.000 0.00 0.00 41.47 4.08
4237 6880 1.080366 CATGCCTGTGCGTTGCAAT 60.080 52.632 0.59 0.00 41.47 3.56
4238 6881 1.080366 ATGCCTGTGCGTTGCAATG 60.080 52.632 14.54 14.54 41.47 2.82
4239 6882 2.431260 GCCTGTGCGTTGCAATGG 60.431 61.111 19.93 8.34 41.47 3.16
4240 6883 2.259204 CCTGTGCGTTGCAATGGG 59.741 61.111 19.93 8.83 41.47 4.00
4241 6884 2.259204 CTGTGCGTTGCAATGGGG 59.741 61.111 19.93 3.35 41.47 4.96
4242 6885 3.285523 CTGTGCGTTGCAATGGGGG 62.286 63.158 19.93 0.92 41.47 5.40
4243 6886 2.988684 GTGCGTTGCAATGGGGGA 60.989 61.111 19.93 0.60 41.47 4.81
4244 6887 2.203552 TGCGTTGCAATGGGGGAA 60.204 55.556 19.93 0.00 34.76 3.97
4245 6888 1.834378 TGCGTTGCAATGGGGGAAA 60.834 52.632 19.93 0.00 34.76 3.13
4246 6889 1.369321 GCGTTGCAATGGGGGAAAA 59.631 52.632 19.93 0.00 0.00 2.29
4247 6890 0.948623 GCGTTGCAATGGGGGAAAAC 60.949 55.000 19.93 0.00 0.00 2.43
4248 6891 0.390860 CGTTGCAATGGGGGAAAACA 59.609 50.000 11.00 0.00 0.00 2.83
4249 6892 1.202580 CGTTGCAATGGGGGAAAACAA 60.203 47.619 11.00 0.00 0.00 2.83
4250 6893 2.743183 CGTTGCAATGGGGGAAAACAAA 60.743 45.455 11.00 0.00 0.00 2.83
4251 6894 3.282885 GTTGCAATGGGGGAAAACAAAA 58.717 40.909 0.59 0.00 0.00 2.44
4252 6895 3.872459 TGCAATGGGGGAAAACAAAAT 57.128 38.095 0.00 0.00 0.00 1.82
4253 6896 4.982241 TGCAATGGGGGAAAACAAAATA 57.018 36.364 0.00 0.00 0.00 1.40
4254 6897 4.904241 TGCAATGGGGGAAAACAAAATAG 58.096 39.130 0.00 0.00 0.00 1.73
4255 6898 3.689161 GCAATGGGGGAAAACAAAATAGC 59.311 43.478 0.00 0.00 0.00 2.97
4256 6899 4.565444 GCAATGGGGGAAAACAAAATAGCT 60.565 41.667 0.00 0.00 0.00 3.32
4257 6900 5.337975 GCAATGGGGGAAAACAAAATAGCTA 60.338 40.000 0.00 0.00 0.00 3.32
4258 6901 6.340522 CAATGGGGGAAAACAAAATAGCTAG 58.659 40.000 0.00 0.00 0.00 3.42
4259 6902 3.767131 TGGGGGAAAACAAAATAGCTAGC 59.233 43.478 6.62 6.62 0.00 3.42
4260 6903 4.023980 GGGGGAAAACAAAATAGCTAGCT 58.976 43.478 23.12 23.12 0.00 3.32
4261 6904 4.466370 GGGGGAAAACAAAATAGCTAGCTT 59.534 41.667 24.88 8.10 0.00 3.74
4262 6905 5.394224 GGGGGAAAACAAAATAGCTAGCTTC 60.394 44.000 24.88 10.62 0.00 3.86
4263 6906 5.185056 GGGGAAAACAAAATAGCTAGCTTCA 59.815 40.000 24.88 6.02 0.00 3.02
4264 6907 6.127338 GGGGAAAACAAAATAGCTAGCTTCAT 60.127 38.462 24.88 8.55 0.00 2.57
4265 6908 7.068226 GGGGAAAACAAAATAGCTAGCTTCATA 59.932 37.037 24.88 4.69 0.00 2.15
4266 6909 8.633561 GGGAAAACAAAATAGCTAGCTTCATAT 58.366 33.333 24.88 7.29 0.00 1.78
4272 6915 9.784531 ACAAAATAGCTAGCTTCATATACATGT 57.215 29.630 24.88 12.30 33.57 3.21
4276 6919 9.442047 AATAGCTAGCTTCATATACATGTTTCC 57.558 33.333 24.88 0.00 33.57 3.13
4277 6920 7.072263 AGCTAGCTTCATATACATGTTTCCT 57.928 36.000 12.68 0.00 33.57 3.36
4278 6921 8.195165 AGCTAGCTTCATATACATGTTTCCTA 57.805 34.615 12.68 0.00 33.57 2.94
4279 6922 8.310382 AGCTAGCTTCATATACATGTTTCCTAG 58.690 37.037 12.68 4.94 33.57 3.02
4280 6923 8.307483 GCTAGCTTCATATACATGTTTCCTAGA 58.693 37.037 7.70 0.00 33.57 2.43
4292 6935 8.162878 ACATGTTTCCTAGATAAGATTGCATG 57.837 34.615 0.00 0.00 36.08 4.06
4293 6936 7.776969 ACATGTTTCCTAGATAAGATTGCATGT 59.223 33.333 0.00 0.00 37.70 3.21
4294 6937 7.558161 TGTTTCCTAGATAAGATTGCATGTG 57.442 36.000 0.00 0.00 0.00 3.21
4295 6938 7.112122 TGTTTCCTAGATAAGATTGCATGTGT 58.888 34.615 0.00 0.00 0.00 3.72
4296 6939 8.264347 TGTTTCCTAGATAAGATTGCATGTGTA 58.736 33.333 0.00 0.00 0.00 2.90
4297 6940 9.277783 GTTTCCTAGATAAGATTGCATGTGTAT 57.722 33.333 0.00 0.00 0.00 2.29
4298 6941 8.837788 TTCCTAGATAAGATTGCATGTGTATG 57.162 34.615 0.00 0.00 37.36 2.39
4299 6942 7.966812 TCCTAGATAAGATTGCATGTGTATGT 58.033 34.615 0.00 0.00 36.65 2.29
4300 6943 9.088987 TCCTAGATAAGATTGCATGTGTATGTA 57.911 33.333 0.00 0.00 36.65 2.29
4301 6944 9.710900 CCTAGATAAGATTGCATGTGTATGTAA 57.289 33.333 0.00 0.00 41.95 2.41
4312 6955 9.845740 TTGCATGTGTATGTAAATTATACCTCT 57.154 29.630 0.00 0.00 36.21 3.69
4370 7013 7.424227 TGAATTCAACTTCATCCAAAATTGC 57.576 32.000 5.45 0.00 30.34 3.56
4371 7014 7.218614 TGAATTCAACTTCATCCAAAATTGCT 58.781 30.769 5.45 0.00 30.34 3.91
4372 7015 7.171848 TGAATTCAACTTCATCCAAAATTGCTG 59.828 33.333 5.45 0.00 30.34 4.41
4373 7016 4.885413 TCAACTTCATCCAAAATTGCTGG 58.115 39.130 1.10 1.10 35.05 4.85
4374 7017 4.588106 TCAACTTCATCCAAAATTGCTGGA 59.412 37.500 11.03 11.03 46.86 3.86
4375 7018 5.070180 TCAACTTCATCCAAAATTGCTGGAA 59.930 36.000 12.33 0.00 45.96 3.53
4376 7019 5.549742 ACTTCATCCAAAATTGCTGGAAA 57.450 34.783 12.33 4.41 45.96 3.13
4377 7020 5.299949 ACTTCATCCAAAATTGCTGGAAAC 58.700 37.500 12.33 0.00 45.96 2.78
4378 7021 4.952071 TCATCCAAAATTGCTGGAAACA 57.048 36.364 12.33 0.00 45.96 2.83
4379 7022 4.630111 TCATCCAAAATTGCTGGAAACAC 58.370 39.130 12.33 0.00 45.96 3.32
4380 7023 3.467374 TCCAAAATTGCTGGAAACACC 57.533 42.857 7.00 0.00 40.08 4.16
4381 7024 3.037549 TCCAAAATTGCTGGAAACACCT 58.962 40.909 7.00 0.00 40.08 4.00
4382 7025 3.069443 TCCAAAATTGCTGGAAACACCTC 59.931 43.478 7.00 0.00 40.08 3.85
4383 7026 3.392882 CAAAATTGCTGGAAACACCTCC 58.607 45.455 0.00 0.00 39.86 4.30
4384 7027 1.247567 AATTGCTGGAAACACCTCCG 58.752 50.000 0.00 0.00 38.44 4.63
4385 7028 0.110486 ATTGCTGGAAACACCTCCGT 59.890 50.000 0.00 0.00 38.44 4.69
4386 7029 0.817634 TTGCTGGAAACACCTCCGTG 60.818 55.000 0.00 0.00 46.11 4.94
4387 7030 1.966451 GCTGGAAACACCTCCGTGG 60.966 63.158 0.00 0.00 44.86 4.94
4388 7031 1.302511 CTGGAAACACCTCCGTGGG 60.303 63.158 0.00 0.00 44.86 4.61
4389 7032 2.052047 CTGGAAACACCTCCGTGGGT 62.052 60.000 0.00 0.00 44.86 4.51
4390 7033 1.149854 GGAAACACCTCCGTGGGTT 59.850 57.895 0.00 0.00 44.86 4.11
4391 7034 0.466739 GGAAACACCTCCGTGGGTTT 60.467 55.000 0.00 0.00 44.86 3.27
4392 7035 0.666374 GAAACACCTCCGTGGGTTTG 59.334 55.000 12.38 0.46 44.86 2.93
4393 7036 0.753848 AAACACCTCCGTGGGTTTGG 60.754 55.000 0.00 0.00 44.86 3.28
4394 7037 1.637724 AACACCTCCGTGGGTTTGGA 61.638 55.000 0.00 0.00 44.86 3.53
4395 7038 1.149627 CACCTCCGTGGGTTTGGAA 59.850 57.895 0.00 0.00 41.11 3.53
4396 7039 0.466555 CACCTCCGTGGGTTTGGAAA 60.467 55.000 0.00 0.00 41.11 3.13
4397 7040 0.259356 ACCTCCGTGGGTTTGGAAAA 59.741 50.000 0.00 0.00 41.11 2.29
4398 7041 1.342175 ACCTCCGTGGGTTTGGAAAAA 60.342 47.619 0.00 0.00 41.11 1.94
4399 7042 1.967779 CCTCCGTGGGTTTGGAAAAAT 59.032 47.619 0.00 0.00 32.89 1.82
4400 7043 2.367241 CCTCCGTGGGTTTGGAAAAATT 59.633 45.455 0.00 0.00 32.89 1.82
4401 7044 3.181459 CCTCCGTGGGTTTGGAAAAATTT 60.181 43.478 0.00 0.00 32.89 1.82
4402 7045 4.055360 CTCCGTGGGTTTGGAAAAATTTC 58.945 43.478 0.00 0.00 32.89 2.17
4403 7046 3.451178 TCCGTGGGTTTGGAAAAATTTCA 59.549 39.130 8.06 0.00 38.92 2.69
4404 7047 3.807071 CCGTGGGTTTGGAAAAATTTCAG 59.193 43.478 8.06 0.00 38.92 3.02
4405 7048 4.442192 CCGTGGGTTTGGAAAAATTTCAGA 60.442 41.667 8.06 0.00 38.92 3.27
4406 7049 5.112686 CGTGGGTTTGGAAAAATTTCAGAA 58.887 37.500 8.06 0.00 38.92 3.02
4407 7050 5.582665 CGTGGGTTTGGAAAAATTTCAGAAA 59.417 36.000 8.06 0.00 38.92 2.52
4408 7051 6.092807 CGTGGGTTTGGAAAAATTTCAGAAAA 59.907 34.615 0.00 3.31 38.92 2.29
4409 7052 7.247728 GTGGGTTTGGAAAAATTTCAGAAAAC 58.752 34.615 0.00 15.44 38.92 2.43
4410 7053 6.375736 TGGGTTTGGAAAAATTTCAGAAAACC 59.624 34.615 24.29 24.29 44.81 3.27
4411 7054 6.791303 GGTTTGGAAAAATTTCAGAAAACCC 58.209 36.000 23.16 14.08 42.79 4.11
4412 7055 6.601613 GGTTTGGAAAAATTTCAGAAAACCCT 59.398 34.615 23.16 0.00 42.79 4.34
4413 7056 7.415095 GGTTTGGAAAAATTTCAGAAAACCCTG 60.415 37.037 23.16 0.00 42.79 4.45
4414 7057 6.306643 TGGAAAAATTTCAGAAAACCCTGT 57.693 33.333 0.00 0.00 38.92 4.00
4415 7058 6.345298 TGGAAAAATTTCAGAAAACCCTGTC 58.655 36.000 0.00 0.00 38.92 3.51
4416 7059 6.070538 TGGAAAAATTTCAGAAAACCCTGTCA 60.071 34.615 0.00 0.00 38.92 3.58
4417 7060 6.821160 GGAAAAATTTCAGAAAACCCTGTCAA 59.179 34.615 0.00 0.00 38.92 3.18
4418 7061 7.201609 GGAAAAATTTCAGAAAACCCTGTCAAC 60.202 37.037 0.00 0.00 38.92 3.18
4419 7062 5.930837 AATTTCAGAAAACCCTGTCAACA 57.069 34.783 0.00 0.00 35.71 3.33
4420 7063 5.930837 ATTTCAGAAAACCCTGTCAACAA 57.069 34.783 0.00 0.00 35.71 2.83
4421 7064 5.730296 TTTCAGAAAACCCTGTCAACAAA 57.270 34.783 0.00 0.00 35.71 2.83
4422 7065 5.930837 TTCAGAAAACCCTGTCAACAAAT 57.069 34.783 0.00 0.00 35.71 2.32
4423 7066 5.930837 TCAGAAAACCCTGTCAACAAATT 57.069 34.783 0.00 0.00 35.71 1.82
4424 7067 6.293004 TCAGAAAACCCTGTCAACAAATTT 57.707 33.333 0.00 0.00 35.71 1.82
4425 7068 6.337356 TCAGAAAACCCTGTCAACAAATTTC 58.663 36.000 0.00 0.00 35.71 2.17
4426 7069 6.071108 TCAGAAAACCCTGTCAACAAATTTCA 60.071 34.615 0.00 0.00 35.71 2.69
4427 7070 6.035975 CAGAAAACCCTGTCAACAAATTTCAC 59.964 38.462 0.00 0.00 0.00 3.18
4428 7071 4.400529 AACCCTGTCAACAAATTTCACC 57.599 40.909 0.00 0.00 0.00 4.02
4429 7072 3.642141 ACCCTGTCAACAAATTTCACCT 58.358 40.909 0.00 0.00 0.00 4.00
4430 7073 4.030216 ACCCTGTCAACAAATTTCACCTT 58.970 39.130 0.00 0.00 0.00 3.50
4431 7074 4.469586 ACCCTGTCAACAAATTTCACCTTT 59.530 37.500 0.00 0.00 0.00 3.11
4432 7075 5.045942 ACCCTGTCAACAAATTTCACCTTTT 60.046 36.000 0.00 0.00 0.00 2.27
4433 7076 5.523552 CCCTGTCAACAAATTTCACCTTTTC 59.476 40.000 0.00 0.00 0.00 2.29
4434 7077 5.523552 CCTGTCAACAAATTTCACCTTTTCC 59.476 40.000 0.00 0.00 0.00 3.13
4435 7078 5.423886 TGTCAACAAATTTCACCTTTTCCC 58.576 37.500 0.00 0.00 0.00 3.97
4436 7079 5.046304 TGTCAACAAATTTCACCTTTTCCCA 60.046 36.000 0.00 0.00 0.00 4.37
4437 7080 5.523552 GTCAACAAATTTCACCTTTTCCCAG 59.476 40.000 0.00 0.00 0.00 4.45
4438 7081 5.423610 TCAACAAATTTCACCTTTTCCCAGA 59.576 36.000 0.00 0.00 0.00 3.86
4439 7082 5.948742 ACAAATTTCACCTTTTCCCAGAA 57.051 34.783 0.00 0.00 0.00 3.02
4440 7083 5.917462 ACAAATTTCACCTTTTCCCAGAAG 58.083 37.500 0.00 0.00 0.00 2.85
4441 7084 5.425217 ACAAATTTCACCTTTTCCCAGAAGT 59.575 36.000 0.00 0.00 0.00 3.01
4442 7085 5.535753 AATTTCACCTTTTCCCAGAAGTG 57.464 39.130 0.00 0.00 0.00 3.16
4443 7086 3.662759 TTCACCTTTTCCCAGAAGTGT 57.337 42.857 0.00 0.00 0.00 3.55
4444 7087 3.662759 TCACCTTTTCCCAGAAGTGTT 57.337 42.857 0.00 0.00 0.00 3.32
4445 7088 4.781775 TCACCTTTTCCCAGAAGTGTTA 57.218 40.909 0.00 0.00 0.00 2.41
4446 7089 5.319043 TCACCTTTTCCCAGAAGTGTTAT 57.681 39.130 0.00 0.00 0.00 1.89
4447 7090 5.070001 TCACCTTTTCCCAGAAGTGTTATG 58.930 41.667 0.00 0.00 0.00 1.90
4448 7091 4.827284 CACCTTTTCCCAGAAGTGTTATGT 59.173 41.667 0.00 0.00 0.00 2.29
4449 7092 5.048713 CACCTTTTCCCAGAAGTGTTATGTC 60.049 44.000 0.00 0.00 0.00 3.06
4450 7093 5.163088 ACCTTTTCCCAGAAGTGTTATGTCT 60.163 40.000 0.00 0.00 0.00 3.41
4451 7094 5.770162 CCTTTTCCCAGAAGTGTTATGTCTT 59.230 40.000 0.00 0.00 0.00 3.01
4452 7095 6.265422 CCTTTTCCCAGAAGTGTTATGTCTTT 59.735 38.462 0.00 0.00 0.00 2.52
4453 7096 6.877611 TTTCCCAGAAGTGTTATGTCTTTC 57.122 37.500 0.00 0.00 0.00 2.62
4454 7097 4.906618 TCCCAGAAGTGTTATGTCTTTCC 58.093 43.478 0.00 0.00 0.00 3.13
4455 7098 4.597507 TCCCAGAAGTGTTATGTCTTTCCT 59.402 41.667 0.00 0.00 0.00 3.36
4456 7099 5.073144 TCCCAGAAGTGTTATGTCTTTCCTT 59.927 40.000 0.00 0.00 0.00 3.36
4457 7100 5.182001 CCCAGAAGTGTTATGTCTTTCCTTG 59.818 44.000 0.00 0.00 0.00 3.61
4458 7101 5.335191 CCAGAAGTGTTATGTCTTTCCTTGC 60.335 44.000 0.00 0.00 0.00 4.01
4459 7102 4.762251 AGAAGTGTTATGTCTTTCCTTGCC 59.238 41.667 0.00 0.00 0.00 4.52
4460 7103 4.373156 AGTGTTATGTCTTTCCTTGCCT 57.627 40.909 0.00 0.00 0.00 4.75
4461 7104 4.729868 AGTGTTATGTCTTTCCTTGCCTT 58.270 39.130 0.00 0.00 0.00 4.35
4462 7105 5.140454 AGTGTTATGTCTTTCCTTGCCTTT 58.860 37.500 0.00 0.00 0.00 3.11
4463 7106 5.010012 AGTGTTATGTCTTTCCTTGCCTTTG 59.990 40.000 0.00 0.00 0.00 2.77
4464 7107 4.892934 TGTTATGTCTTTCCTTGCCTTTGT 59.107 37.500 0.00 0.00 0.00 2.83
4465 7108 5.362430 TGTTATGTCTTTCCTTGCCTTTGTT 59.638 36.000 0.00 0.00 0.00 2.83
4466 7109 6.547880 TGTTATGTCTTTCCTTGCCTTTGTTA 59.452 34.615 0.00 0.00 0.00 2.41
4467 7110 7.232534 TGTTATGTCTTTCCTTGCCTTTGTTAT 59.767 33.333 0.00 0.00 0.00 1.89
4468 7111 6.670695 ATGTCTTTCCTTGCCTTTGTTATT 57.329 33.333 0.00 0.00 0.00 1.40
4469 7112 6.084326 TGTCTTTCCTTGCCTTTGTTATTC 57.916 37.500 0.00 0.00 0.00 1.75
4470 7113 5.833131 TGTCTTTCCTTGCCTTTGTTATTCT 59.167 36.000 0.00 0.00 0.00 2.40
4471 7114 6.016276 TGTCTTTCCTTGCCTTTGTTATTCTC 60.016 38.462 0.00 0.00 0.00 2.87
4472 7115 6.016276 GTCTTTCCTTGCCTTTGTTATTCTCA 60.016 38.462 0.00 0.00 0.00 3.27
4473 7116 6.549364 TCTTTCCTTGCCTTTGTTATTCTCAA 59.451 34.615 0.00 0.00 0.00 3.02
4474 7117 6.916360 TTCCTTGCCTTTGTTATTCTCAAT 57.084 33.333 0.00 0.00 0.00 2.57
4475 7118 6.916360 TCCTTGCCTTTGTTATTCTCAATT 57.084 33.333 0.00 0.00 0.00 2.32
4476 7119 7.301868 TCCTTGCCTTTGTTATTCTCAATTT 57.698 32.000 0.00 0.00 0.00 1.82
4477 7120 7.378181 TCCTTGCCTTTGTTATTCTCAATTTC 58.622 34.615 0.00 0.00 0.00 2.17
4478 7121 7.233348 TCCTTGCCTTTGTTATTCTCAATTTCT 59.767 33.333 0.00 0.00 0.00 2.52
4479 7122 8.522830 CCTTGCCTTTGTTATTCTCAATTTCTA 58.477 33.333 0.00 0.00 0.00 2.10
4494 7137 9.369904 TCTCAATTTCTATAATTGCAAAAAGGC 57.630 29.630 1.71 0.00 37.50 4.35
4495 7138 9.153721 CTCAATTTCTATAATTGCAAAAAGGCA 57.846 29.630 1.71 0.00 43.19 4.75
4496 7139 9.153721 TCAATTTCTATAATTGCAAAAAGGCAG 57.846 29.630 1.71 0.00 45.88 4.85
4497 7140 9.153721 CAATTTCTATAATTGCAAAAAGGCAGA 57.846 29.630 1.71 0.00 45.88 4.26
4498 7141 8.937634 ATTTCTATAATTGCAAAAAGGCAGAG 57.062 30.769 1.71 0.00 45.88 3.35
4499 7142 7.701539 TTCTATAATTGCAAAAAGGCAGAGA 57.298 32.000 1.71 0.00 45.88 3.10
4500 7143 7.701539 TCTATAATTGCAAAAAGGCAGAGAA 57.298 32.000 1.71 0.00 45.88 2.87
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 9.088987 TGGAAGTATCATAACTAGTATCATGCA 57.911 33.333 0.00 0.00 0.00 3.96
5 6 9.360093 GTGGAAGTATCATAACTAGTATCATGC 57.640 37.037 0.00 0.00 0.00 4.06
16 17 9.425577 GCCTATCTAAAGTGGAAGTATCATAAC 57.574 37.037 0.00 0.00 0.00 1.89
17 18 9.381038 AGCCTATCTAAAGTGGAAGTATCATAA 57.619 33.333 0.00 0.00 0.00 1.90
18 19 8.958060 AGCCTATCTAAAGTGGAAGTATCATA 57.042 34.615 0.00 0.00 0.00 2.15
19 20 7.863901 AGCCTATCTAAAGTGGAAGTATCAT 57.136 36.000 0.00 0.00 0.00 2.45
20 21 7.676683 AAGCCTATCTAAAGTGGAAGTATCA 57.323 36.000 0.00 0.00 0.00 2.15
21 22 9.080097 TCTAAGCCTATCTAAAGTGGAAGTATC 57.920 37.037 0.00 0.00 0.00 2.24
22 23 9.435570 TTCTAAGCCTATCTAAAGTGGAAGTAT 57.564 33.333 0.00 0.00 0.00 2.12
23 24 8.834004 TTCTAAGCCTATCTAAAGTGGAAGTA 57.166 34.615 0.00 0.00 0.00 2.24
24 25 7.735326 TTCTAAGCCTATCTAAAGTGGAAGT 57.265 36.000 0.00 0.00 0.00 3.01
27 28 9.435570 AGTATTTCTAAGCCTATCTAAAGTGGA 57.564 33.333 0.00 0.00 0.00 4.02
28 29 9.482627 CAGTATTTCTAAGCCTATCTAAAGTGG 57.517 37.037 0.00 0.00 0.00 4.00
37 38 9.110502 GCTAAACAACAGTATTTCTAAGCCTAT 57.889 33.333 0.00 0.00 0.00 2.57
38 39 8.319146 AGCTAAACAACAGTATTTCTAAGCCTA 58.681 33.333 0.00 0.00 0.00 3.93
39 40 7.168905 AGCTAAACAACAGTATTTCTAAGCCT 58.831 34.615 0.00 0.00 0.00 4.58
40 41 7.379098 AGCTAAACAACAGTATTTCTAAGCC 57.621 36.000 0.00 0.00 0.00 4.35
41 42 8.290325 ACAAGCTAAACAACAGTATTTCTAAGC 58.710 33.333 0.00 0.00 0.00 3.09
42 43 9.599322 CACAAGCTAAACAACAGTATTTCTAAG 57.401 33.333 0.00 0.00 0.00 2.18
43 44 9.116067 ACACAAGCTAAACAACAGTATTTCTAA 57.884 29.630 0.00 0.00 0.00 2.10
44 45 8.556194 CACACAAGCTAAACAACAGTATTTCTA 58.444 33.333 0.00 0.00 0.00 2.10
45 46 7.282224 TCACACAAGCTAAACAACAGTATTTCT 59.718 33.333 0.00 0.00 0.00 2.52
46 47 7.376072 GTCACACAAGCTAAACAACAGTATTTC 59.624 37.037 0.00 0.00 0.00 2.17
47 48 7.193595 GTCACACAAGCTAAACAACAGTATTT 58.806 34.615 0.00 0.00 0.00 1.40
48 49 6.511121 CGTCACACAAGCTAAACAACAGTATT 60.511 38.462 0.00 0.00 0.00 1.89
49 50 5.050363 CGTCACACAAGCTAAACAACAGTAT 60.050 40.000 0.00 0.00 0.00 2.12
50 51 4.269123 CGTCACACAAGCTAAACAACAGTA 59.731 41.667 0.00 0.00 0.00 2.74
51 52 3.063452 CGTCACACAAGCTAAACAACAGT 59.937 43.478 0.00 0.00 0.00 3.55
52 53 3.063452 ACGTCACACAAGCTAAACAACAG 59.937 43.478 0.00 0.00 0.00 3.16
53 54 3.004171 ACGTCACACAAGCTAAACAACA 58.996 40.909 0.00 0.00 0.00 3.33
54 55 3.668596 ACGTCACACAAGCTAAACAAC 57.331 42.857 0.00 0.00 0.00 3.32
55 56 3.936453 AGAACGTCACACAAGCTAAACAA 59.064 39.130 0.00 0.00 0.00 2.83
56 57 3.527533 AGAACGTCACACAAGCTAAACA 58.472 40.909 0.00 0.00 0.00 2.83
57 58 4.531659 AAGAACGTCACACAAGCTAAAC 57.468 40.909 0.00 0.00 0.00 2.01
58 59 5.328691 CAAAAGAACGTCACACAAGCTAAA 58.671 37.500 0.00 0.00 0.00 1.85
59 60 4.729458 GCAAAAGAACGTCACACAAGCTAA 60.729 41.667 0.00 0.00 0.00 3.09
60 61 3.242608 GCAAAAGAACGTCACACAAGCTA 60.243 43.478 0.00 0.00 0.00 3.32
61 62 2.477863 GCAAAAGAACGTCACACAAGCT 60.478 45.455 0.00 0.00 0.00 3.74
62 63 1.846175 GCAAAAGAACGTCACACAAGC 59.154 47.619 0.00 0.00 0.00 4.01
63 64 3.181511 TGAGCAAAAGAACGTCACACAAG 60.182 43.478 0.00 0.00 0.00 3.16
64 65 2.744741 TGAGCAAAAGAACGTCACACAA 59.255 40.909 0.00 0.00 0.00 3.33
65 66 2.351455 TGAGCAAAAGAACGTCACACA 58.649 42.857 0.00 0.00 0.00 3.72
66 67 3.398954 TTGAGCAAAAGAACGTCACAC 57.601 42.857 0.00 0.00 0.00 3.82
67 68 4.427096 TTTTGAGCAAAAGAACGTCACA 57.573 36.364 4.39 0.00 35.57 3.58
77 78 7.076983 CACAAGCTTTTTCTTTTTGAGCAAAA 58.923 30.769 0.00 4.39 38.40 2.44
78 79 6.204495 ACACAAGCTTTTTCTTTTTGAGCAAA 59.796 30.769 0.00 0.00 35.86 3.68
79 80 5.700373 ACACAAGCTTTTTCTTTTTGAGCAA 59.300 32.000 0.00 0.00 35.86 3.91
80 81 5.120519 CACACAAGCTTTTTCTTTTTGAGCA 59.879 36.000 0.00 0.00 35.86 4.26
81 82 5.348451 TCACACAAGCTTTTTCTTTTTGAGC 59.652 36.000 0.00 0.00 0.00 4.26
82 83 6.452872 CGTCACACAAGCTTTTTCTTTTTGAG 60.453 38.462 0.00 0.00 0.00 3.02
83 84 5.344665 CGTCACACAAGCTTTTTCTTTTTGA 59.655 36.000 0.00 0.00 0.00 2.69
84 85 5.118510 ACGTCACACAAGCTTTTTCTTTTTG 59.881 36.000 0.00 0.00 0.00 2.44
85 86 5.118510 CACGTCACACAAGCTTTTTCTTTTT 59.881 36.000 0.00 0.00 0.00 1.94
86 87 4.621034 CACGTCACACAAGCTTTTTCTTTT 59.379 37.500 0.00 0.00 0.00 2.27
87 88 4.083003 TCACGTCACACAAGCTTTTTCTTT 60.083 37.500 0.00 0.00 0.00 2.52
88 89 3.438781 TCACGTCACACAAGCTTTTTCTT 59.561 39.130 0.00 0.00 0.00 2.52
89 90 3.006940 TCACGTCACACAAGCTTTTTCT 58.993 40.909 0.00 0.00 0.00 2.52
90 91 3.398954 TCACGTCACACAAGCTTTTTC 57.601 42.857 0.00 0.00 0.00 2.29
91 92 3.376859 TCATCACGTCACACAAGCTTTTT 59.623 39.130 0.00 0.00 0.00 1.94
92 93 2.942376 TCATCACGTCACACAAGCTTTT 59.058 40.909 0.00 0.00 0.00 2.27
93 94 2.560504 TCATCACGTCACACAAGCTTT 58.439 42.857 0.00 0.00 0.00 3.51
94 95 2.238942 TCATCACGTCACACAAGCTT 57.761 45.000 0.00 0.00 0.00 3.74
95 96 2.138320 CTTCATCACGTCACACAAGCT 58.862 47.619 0.00 0.00 0.00 3.74
96 97 1.195448 CCTTCATCACGTCACACAAGC 59.805 52.381 0.00 0.00 0.00 4.01
97 98 2.483876 ACCTTCATCACGTCACACAAG 58.516 47.619 0.00 0.00 0.00 3.16
98 99 2.613026 ACCTTCATCACGTCACACAA 57.387 45.000 0.00 0.00 0.00 3.33
99 100 3.953712 ATACCTTCATCACGTCACACA 57.046 42.857 0.00 0.00 0.00 3.72
100 101 5.049680 ACAAAATACCTTCATCACGTCACAC 60.050 40.000 0.00 0.00 0.00 3.82
101 102 5.049749 CACAAAATACCTTCATCACGTCACA 60.050 40.000 0.00 0.00 0.00 3.58
102 103 5.382303 CACAAAATACCTTCATCACGTCAC 58.618 41.667 0.00 0.00 0.00 3.67
103 104 4.454161 CCACAAAATACCTTCATCACGTCA 59.546 41.667 0.00 0.00 0.00 4.35
104 105 4.693566 TCCACAAAATACCTTCATCACGTC 59.306 41.667 0.00 0.00 0.00 4.34
105 106 4.647611 TCCACAAAATACCTTCATCACGT 58.352 39.130 0.00 0.00 0.00 4.49
106 107 5.621197 TTCCACAAAATACCTTCATCACG 57.379 39.130 0.00 0.00 0.00 4.35
107 108 5.048083 TGCTTCCACAAAATACCTTCATCAC 60.048 40.000 0.00 0.00 0.00 3.06
108 109 5.076182 TGCTTCCACAAAATACCTTCATCA 58.924 37.500 0.00 0.00 0.00 3.07
109 110 5.643379 TGCTTCCACAAAATACCTTCATC 57.357 39.130 0.00 0.00 0.00 2.92
110 111 5.279456 GGTTGCTTCCACAAAATACCTTCAT 60.279 40.000 0.00 0.00 0.00 2.57
111 112 4.038642 GGTTGCTTCCACAAAATACCTTCA 59.961 41.667 0.00 0.00 0.00 3.02
112 113 4.038642 TGGTTGCTTCCACAAAATACCTTC 59.961 41.667 0.00 0.00 31.96 3.46
113 114 3.964031 TGGTTGCTTCCACAAAATACCTT 59.036 39.130 0.00 0.00 31.96 3.50
114 115 3.571590 TGGTTGCTTCCACAAAATACCT 58.428 40.909 0.00 0.00 31.96 3.08
115 116 3.572255 TCTGGTTGCTTCCACAAAATACC 59.428 43.478 0.00 0.00 33.55 2.73
116 117 4.278419 ACTCTGGTTGCTTCCACAAAATAC 59.722 41.667 0.00 0.00 33.55 1.89
117 118 4.278170 CACTCTGGTTGCTTCCACAAAATA 59.722 41.667 0.00 0.00 33.55 1.40
118 119 3.068590 CACTCTGGTTGCTTCCACAAAAT 59.931 43.478 0.00 0.00 33.55 1.82
119 120 2.426738 CACTCTGGTTGCTTCCACAAAA 59.573 45.455 0.00 0.00 33.55 2.44
120 121 2.023673 CACTCTGGTTGCTTCCACAAA 58.976 47.619 0.00 0.00 33.55 2.83
121 122 1.679139 CACTCTGGTTGCTTCCACAA 58.321 50.000 0.00 0.00 33.55 3.33
122 123 0.819259 GCACTCTGGTTGCTTCCACA 60.819 55.000 0.00 0.00 33.55 4.17
123 124 1.518903 GGCACTCTGGTTGCTTCCAC 61.519 60.000 0.00 0.00 33.55 4.02
124 125 1.228245 GGCACTCTGGTTGCTTCCA 60.228 57.895 0.00 1.02 36.00 3.53
125 126 2.328099 CGGCACTCTGGTTGCTTCC 61.328 63.158 0.00 0.00 0.00 3.46
126 127 0.674895 ATCGGCACTCTGGTTGCTTC 60.675 55.000 0.00 0.00 0.00 3.86
127 128 0.957395 CATCGGCACTCTGGTTGCTT 60.957 55.000 0.00 0.00 0.00 3.91
128 129 1.376424 CATCGGCACTCTGGTTGCT 60.376 57.895 0.00 0.00 0.00 3.91
129 130 2.401766 CCATCGGCACTCTGGTTGC 61.402 63.158 0.00 0.00 0.00 4.17
130 131 1.746615 CCCATCGGCACTCTGGTTG 60.747 63.158 0.00 0.00 0.00 3.77
131 132 1.903877 CTCCCATCGGCACTCTGGTT 61.904 60.000 0.00 0.00 0.00 3.67
132 133 2.284625 TCCCATCGGCACTCTGGT 60.285 61.111 0.00 0.00 0.00 4.00
133 134 1.406065 ATCTCCCATCGGCACTCTGG 61.406 60.000 0.00 0.00 0.00 3.86
134 135 1.271934 CTATCTCCCATCGGCACTCTG 59.728 57.143 0.00 0.00 0.00 3.35
135 136 1.626686 CTATCTCCCATCGGCACTCT 58.373 55.000 0.00 0.00 0.00 3.24
136 137 0.037790 GCTATCTCCCATCGGCACTC 60.038 60.000 0.00 0.00 0.00 3.51
137 138 0.470833 AGCTATCTCCCATCGGCACT 60.471 55.000 0.00 0.00 0.00 4.40
138 139 0.037790 GAGCTATCTCCCATCGGCAC 60.038 60.000 0.00 0.00 33.19 5.01
139 140 0.469892 TGAGCTATCTCCCATCGGCA 60.470 55.000 0.00 0.00 38.58 5.69
140 141 0.246086 CTGAGCTATCTCCCATCGGC 59.754 60.000 0.00 0.00 38.58 5.54
141 142 0.894141 CCTGAGCTATCTCCCATCGG 59.106 60.000 0.00 0.00 38.58 4.18
142 143 0.894141 CCCTGAGCTATCTCCCATCG 59.106 60.000 0.00 0.00 38.58 3.84
143 144 1.203237 TCCCCTGAGCTATCTCCCATC 60.203 57.143 0.00 0.00 38.58 3.51
144 145 0.870313 TCCCCTGAGCTATCTCCCAT 59.130 55.000 0.00 0.00 38.58 4.00
145 146 0.642156 TTCCCCTGAGCTATCTCCCA 59.358 55.000 0.00 0.00 38.58 4.37
146 147 1.133009 TCTTCCCCTGAGCTATCTCCC 60.133 57.143 0.00 0.00 38.58 4.30
147 148 2.247358 CTCTTCCCCTGAGCTATCTCC 58.753 57.143 0.00 0.00 38.58 3.71
148 149 2.627699 CACTCTTCCCCTGAGCTATCTC 59.372 54.545 0.00 0.00 39.78 2.75
149 150 2.676748 CACTCTTCCCCTGAGCTATCT 58.323 52.381 0.00 0.00 35.12 1.98
150 151 1.069978 GCACTCTTCCCCTGAGCTATC 59.930 57.143 0.00 0.00 35.12 2.08
151 152 1.127343 GCACTCTTCCCCTGAGCTAT 58.873 55.000 0.00 0.00 35.12 2.97
152 153 0.252239 TGCACTCTTCCCCTGAGCTA 60.252 55.000 0.00 0.00 35.12 3.32
216 217 5.007039 ACATGAACATGATGCTTATCGTGAC 59.993 40.000 19.56 9.25 41.20 3.67
224 225 1.479323 GGCCACATGAACATGATGCTT 59.521 47.619 19.56 0.00 41.20 3.91
227 228 1.097232 ACGGCCACATGAACATGATG 58.903 50.000 19.56 13.44 41.20 3.07
229 230 0.250684 ACACGGCCACATGAACATGA 60.251 50.000 19.56 0.00 41.20 3.07
230 231 1.447945 TACACGGCCACATGAACATG 58.552 50.000 2.24 12.43 44.15 3.21
231 232 2.418368 ATACACGGCCACATGAACAT 57.582 45.000 2.24 0.00 0.00 2.71
232 233 2.028020 TGTATACACGGCCACATGAACA 60.028 45.455 2.24 0.00 0.00 3.18
233 234 2.623535 TGTATACACGGCCACATGAAC 58.376 47.619 2.24 0.00 0.00 3.18
234 235 3.552132 ATGTATACACGGCCACATGAA 57.448 42.857 7.96 0.00 30.64 2.57
252 253 6.932356 AAGATGAGGCACACTTGTATAATG 57.068 37.500 0.00 0.00 0.00 1.90
254 255 9.710900 CATATAAGATGAGGCACACTTGTATAA 57.289 33.333 12.04 0.00 31.03 0.98
266 267 7.807977 TTCACCTTTTCATATAAGATGAGGC 57.192 36.000 6.92 0.00 0.00 4.70
297 540 2.169352 TGCTGTTGCCTCTCCTTATCTC 59.831 50.000 0.00 0.00 38.71 2.75
298 541 2.170187 CTGCTGTTGCCTCTCCTTATCT 59.830 50.000 0.00 0.00 38.71 1.98
299 542 2.093235 ACTGCTGTTGCCTCTCCTTATC 60.093 50.000 0.00 0.00 38.71 1.75
302 545 1.277557 CTACTGCTGTTGCCTCTCCTT 59.722 52.381 0.09 0.00 38.71 3.36
317 560 3.651206 CAGATCCATGCTGCTACTACTG 58.349 50.000 0.00 0.56 0.00 2.74
328 571 0.250209 ACCGATGAGCAGATCCATGC 60.250 55.000 0.00 0.00 46.88 4.06
364 607 3.128349 CCGTCCGGTTAAACATATCCAG 58.872 50.000 0.00 0.00 0.00 3.86
422 665 4.465305 CCCACCCTTCTTATATACCCGTAG 59.535 50.000 0.00 0.00 0.00 3.51
505 748 2.019897 GCGGCTGGGATTGGAAATGG 62.020 60.000 0.00 0.00 0.00 3.16
562 805 1.425428 CGCGGCAAAGATGAGAACC 59.575 57.895 0.00 0.00 0.00 3.62
579 822 3.494336 CTTGAGCTTCAGCCGCCG 61.494 66.667 0.00 0.00 43.38 6.46
583 826 2.044551 CCCCCTTGAGCTTCAGCC 60.045 66.667 0.00 0.00 43.38 4.85
755 1000 2.758327 ACCGGATGGCGAGCTGTA 60.758 61.111 9.46 0.00 39.70 2.74
776 1021 1.374758 CCAGCCAGGACGACTCAAC 60.375 63.158 0.00 0.00 41.22 3.18
809 1090 1.609555 CTCCCCTGTAGCGACTGATAC 59.390 57.143 5.42 0.00 37.49 2.24
826 1107 2.946762 GCAAACACTCGTGCCTCC 59.053 61.111 0.00 0.00 34.58 4.30
971 1252 2.031163 AAGTGTCGGTGCTCCAGC 59.969 61.111 5.52 0.00 42.50 4.85
972 1253 0.946221 GTCAAGTGTCGGTGCTCCAG 60.946 60.000 5.52 0.00 0.00 3.86
973 1254 1.069090 GTCAAGTGTCGGTGCTCCA 59.931 57.895 5.52 0.00 0.00 3.86
1038 1319 4.111375 CCCCCTGTCTAATTCGATATCG 57.889 50.000 19.14 19.14 41.45 2.92
1223 1525 2.247635 ACCTTGTAGCCCTCTAGATCCA 59.752 50.000 0.00 0.00 0.00 3.41
1775 2380 7.173390 AGCCTCTTTTCTTACATGTGTTTCTAC 59.827 37.037 9.11 0.00 0.00 2.59
1815 2424 2.484417 CGGCTTCATGGAGCTACTGAAT 60.484 50.000 25.16 0.00 42.32 2.57
1981 3116 2.951642 TGGAGTCCTTTGAAACAAGCAG 59.048 45.455 11.33 0.00 0.00 4.24
2049 4611 6.535508 GGAACAGAGGTAGTAGCTTGTAAATG 59.464 42.308 2.85 0.00 0.00 2.32
2064 4626 7.839680 ACTTCAATTATTTTGGAACAGAGGT 57.160 32.000 0.00 0.00 42.39 3.85
2084 4646 4.065789 ACTTCGGACAAATCCAGAACTTC 58.934 43.478 0.00 0.00 46.67 3.01
2209 4771 7.765695 AATGTGTGAAGATCTACAAAACCAT 57.234 32.000 0.00 0.00 0.00 3.55
2288 4850 4.348020 AGGAAAGTATGTACTCCCTCCA 57.652 45.455 13.80 0.00 34.99 3.86
2597 5224 2.360225 GGGCCGCCGTTCCTTTTA 60.360 61.111 2.55 0.00 0.00 1.52
2648 5275 4.032960 TGGCTTGAGCTCATCCTTTTTA 57.967 40.909 26.30 10.94 41.70 1.52
2924 5551 6.586082 CCACCTTGTTATTGTTATTGTGAAGC 59.414 38.462 0.00 0.00 0.00 3.86
3301 5928 9.868277 TTTGTTTCTTATGAGCTTCAAGAAAAA 57.132 25.926 22.29 17.88 45.10 1.94
3522 6149 7.437862 TGCTCATGTTTTTAGGATTTTGTCAAC 59.562 33.333 0.00 0.00 0.00 3.18
3591 6219 1.133025 AGGCAGCATACAAACATTCGC 59.867 47.619 0.00 0.00 0.00 4.70
3595 6223 5.469479 GTTACAAAGGCAGCATACAAACAT 58.531 37.500 0.00 0.00 0.00 2.71
3661 6301 6.581712 TGTACATACTCTGCAAGCAATGATA 58.418 36.000 10.45 0.00 0.00 2.15
3721 6361 3.515901 AGTGAGGGCAGAAAGTAGGTTAG 59.484 47.826 0.00 0.00 0.00 2.34
3755 6395 3.207265 TCTCAGTAAACAGCAGCCAAA 57.793 42.857 0.00 0.00 0.00 3.28
3772 6412 3.199946 TGGGTGGGTATTGATCACTTCTC 59.800 47.826 0.00 0.00 0.00 2.87
3782 6422 5.163457 GGAATAACAACATGGGTGGGTATTG 60.163 44.000 0.00 0.00 40.25 1.90
3786 6426 2.381961 AGGAATAACAACATGGGTGGGT 59.618 45.455 0.00 0.00 0.00 4.51
3790 6430 6.496911 AGCTTTAAAGGAATAACAACATGGGT 59.503 34.615 16.78 0.00 0.00 4.51
3841 6481 6.624423 CACAATTGGAAGGTAAGGAAATCTG 58.376 40.000 10.83 0.00 0.00 2.90
3893 6533 6.940739 TCTCAAAAGACTTTATCTCTGGAGG 58.059 40.000 0.00 0.00 36.27 4.30
3907 6547 6.421202 GTCCACCATATACGATCTCAAAAGAC 59.579 42.308 0.00 0.00 33.32 3.01
3920 6560 5.308825 CCTTCATCAAGGTCCACCATATAC 58.691 45.833 0.00 0.00 44.11 1.47
3964 6604 6.043706 CCCTGAGATGAAAGGTATTATCCTGT 59.956 42.308 0.00 0.00 37.93 4.00
3965 6605 6.270927 TCCCTGAGATGAAAGGTATTATCCTG 59.729 42.308 0.00 0.00 37.93 3.86
3966 6606 6.393897 TCCCTGAGATGAAAGGTATTATCCT 58.606 40.000 0.00 0.00 39.84 3.24
3967 6607 6.688073 TCCCTGAGATGAAAGGTATTATCC 57.312 41.667 0.00 0.00 0.00 2.59
4036 6677 5.414144 TCATCCGTTGATGTAGCATTTTTGA 59.586 36.000 2.77 0.00 46.96 2.69
4046 6687 6.709018 TCTCTGTAATCATCCGTTGATGTA 57.291 37.500 2.77 0.00 44.51 2.29
4047 6688 5.598416 TCTCTGTAATCATCCGTTGATGT 57.402 39.130 2.77 0.00 44.51 3.06
4050 6691 5.351465 GCTTTTCTCTGTAATCATCCGTTGA 59.649 40.000 0.00 0.00 39.12 3.18
4051 6692 5.447818 GGCTTTTCTCTGTAATCATCCGTTG 60.448 44.000 0.00 0.00 0.00 4.10
4052 6693 4.636206 GGCTTTTCTCTGTAATCATCCGTT 59.364 41.667 0.00 0.00 0.00 4.44
4053 6694 4.192317 GGCTTTTCTCTGTAATCATCCGT 58.808 43.478 0.00 0.00 0.00 4.69
4054 6695 4.191544 TGGCTTTTCTCTGTAATCATCCG 58.808 43.478 0.00 0.00 0.00 4.18
4055 6696 5.415701 TGTTGGCTTTTCTCTGTAATCATCC 59.584 40.000 0.00 0.00 0.00 3.51
4056 6697 6.372659 TCTGTTGGCTTTTCTCTGTAATCATC 59.627 38.462 0.00 0.00 0.00 2.92
4057 6698 6.150140 GTCTGTTGGCTTTTCTCTGTAATCAT 59.850 38.462 0.00 0.00 0.00 2.45
4058 6699 5.470098 GTCTGTTGGCTTTTCTCTGTAATCA 59.530 40.000 0.00 0.00 0.00 2.57
4078 6719 8.846423 AGGATTAGTATTATGGGATAGGTCTG 57.154 38.462 0.00 0.00 0.00 3.51
4152 6795 4.809673 CTTGGATTAGGTGGCAGTTTTTC 58.190 43.478 0.00 0.00 0.00 2.29
4164 6807 2.122783 TTTCACGGGCTTGGATTAGG 57.877 50.000 0.00 0.00 0.00 2.69
4172 6815 1.545582 CATGATGGTTTTCACGGGCTT 59.454 47.619 0.00 0.00 0.00 4.35
4197 6840 9.502091 GCATGTTTCCTAGTATGTATAAATGGA 57.498 33.333 0.00 0.00 0.00 3.41
4198 6841 8.730680 GGCATGTTTCCTAGTATGTATAAATGG 58.269 37.037 0.00 0.00 0.00 3.16
4199 6842 9.507329 AGGCATGTTTCCTAGTATGTATAAATG 57.493 33.333 0.00 0.00 30.79 2.32
4200 6843 9.507329 CAGGCATGTTTCCTAGTATGTATAAAT 57.493 33.333 0.00 0.00 31.52 1.40
4201 6844 8.491134 ACAGGCATGTTTCCTAGTATGTATAAA 58.509 33.333 0.00 0.00 35.63 1.40
4202 6845 7.931407 CACAGGCATGTTTCCTAGTATGTATAA 59.069 37.037 0.00 0.00 37.65 0.98
4203 6846 7.441836 CACAGGCATGTTTCCTAGTATGTATA 58.558 38.462 0.00 0.00 37.65 1.47
4204 6847 6.291377 CACAGGCATGTTTCCTAGTATGTAT 58.709 40.000 0.00 0.00 37.65 2.29
4205 6848 5.670485 CACAGGCATGTTTCCTAGTATGTA 58.330 41.667 0.00 0.00 37.65 2.29
4206 6849 4.517285 CACAGGCATGTTTCCTAGTATGT 58.483 43.478 0.00 0.00 37.65 2.29
4207 6850 3.313526 GCACAGGCATGTTTCCTAGTATG 59.686 47.826 0.00 0.00 37.65 2.39
4208 6851 3.545703 GCACAGGCATGTTTCCTAGTAT 58.454 45.455 0.00 0.00 37.65 2.12
4209 6852 2.676750 CGCACAGGCATGTTTCCTAGTA 60.677 50.000 0.00 0.00 37.65 1.82
4210 6853 1.826385 GCACAGGCATGTTTCCTAGT 58.174 50.000 0.00 0.00 37.65 2.57
4211 6854 0.729116 CGCACAGGCATGTTTCCTAG 59.271 55.000 0.00 0.00 37.65 3.02
4212 6855 0.036164 ACGCACAGGCATGTTTCCTA 59.964 50.000 0.00 0.00 37.65 2.94
4213 6856 0.823356 AACGCACAGGCATGTTTCCT 60.823 50.000 0.00 0.00 37.65 3.36
4214 6857 0.664166 CAACGCACAGGCATGTTTCC 60.664 55.000 0.00 0.00 37.65 3.13
4215 6858 1.277495 GCAACGCACAGGCATGTTTC 61.277 55.000 0.00 0.00 37.65 2.78
4216 6859 1.300080 GCAACGCACAGGCATGTTT 60.300 52.632 0.00 0.00 37.65 2.83
4217 6860 2.014064 TTGCAACGCACAGGCATGTT 62.014 50.000 0.00 0.00 38.71 2.71
4218 6861 1.808531 ATTGCAACGCACAGGCATGT 61.809 50.000 0.00 0.00 38.71 3.21
4219 6862 1.080366 ATTGCAACGCACAGGCATG 60.080 52.632 0.00 0.00 38.71 4.06
4220 6863 1.080366 CATTGCAACGCACAGGCAT 60.080 52.632 0.00 0.00 38.71 4.40
4221 6864 2.335729 CATTGCAACGCACAGGCA 59.664 55.556 0.00 0.00 38.71 4.75
4222 6865 2.431260 CCATTGCAACGCACAGGC 60.431 61.111 0.00 0.00 38.71 4.85
4223 6866 2.259204 CCCATTGCAACGCACAGG 59.741 61.111 0.00 0.00 38.71 4.00
4224 6867 2.259204 CCCCATTGCAACGCACAG 59.741 61.111 0.00 0.00 38.71 3.66
4225 6868 3.301554 CCCCCATTGCAACGCACA 61.302 61.111 0.00 0.00 38.71 4.57
4226 6869 2.093537 TTTCCCCCATTGCAACGCAC 62.094 55.000 0.00 0.00 38.71 5.34
4227 6870 1.402896 TTTTCCCCCATTGCAACGCA 61.403 50.000 0.00 0.00 36.47 5.24
4228 6871 0.948623 GTTTTCCCCCATTGCAACGC 60.949 55.000 0.00 0.00 0.00 4.84
4229 6872 0.390860 TGTTTTCCCCCATTGCAACG 59.609 50.000 0.00 0.00 0.00 4.10
4230 6873 2.629336 TTGTTTTCCCCCATTGCAAC 57.371 45.000 0.00 0.00 0.00 4.17
4231 6874 3.652057 TTTTGTTTTCCCCCATTGCAA 57.348 38.095 0.00 0.00 0.00 4.08
4232 6875 3.872459 ATTTTGTTTTCCCCCATTGCA 57.128 38.095 0.00 0.00 0.00 4.08
4233 6876 3.689161 GCTATTTTGTTTTCCCCCATTGC 59.311 43.478 0.00 0.00 0.00 3.56
4234 6877 5.164620 AGCTATTTTGTTTTCCCCCATTG 57.835 39.130 0.00 0.00 0.00 2.82
4235 6878 5.104941 GCTAGCTATTTTGTTTTCCCCCATT 60.105 40.000 7.70 0.00 0.00 3.16
4236 6879 4.405680 GCTAGCTATTTTGTTTTCCCCCAT 59.594 41.667 7.70 0.00 0.00 4.00
4237 6880 3.767131 GCTAGCTATTTTGTTTTCCCCCA 59.233 43.478 7.70 0.00 0.00 4.96
4238 6881 4.023980 AGCTAGCTATTTTGTTTTCCCCC 58.976 43.478 17.69 0.00 0.00 5.40
4239 6882 5.185056 TGAAGCTAGCTATTTTGTTTTCCCC 59.815 40.000 19.70 0.00 0.00 4.81
4240 6883 6.267496 TGAAGCTAGCTATTTTGTTTTCCC 57.733 37.500 19.70 0.00 0.00 3.97
4246 6889 9.784531 ACATGTATATGAAGCTAGCTATTTTGT 57.215 29.630 19.70 9.39 37.73 2.83
4250 6893 9.442047 GGAAACATGTATATGAAGCTAGCTATT 57.558 33.333 19.70 2.33 37.73 1.73
4251 6894 8.820831 AGGAAACATGTATATGAAGCTAGCTAT 58.179 33.333 19.70 11.57 37.73 2.97
4252 6895 8.195165 AGGAAACATGTATATGAAGCTAGCTA 57.805 34.615 19.70 3.08 37.73 3.32
4253 6896 7.072263 AGGAAACATGTATATGAAGCTAGCT 57.928 36.000 12.68 12.68 37.73 3.32
4254 6897 8.307483 TCTAGGAAACATGTATATGAAGCTAGC 58.693 37.037 6.62 6.62 37.73 3.42
4266 6909 9.276590 CATGCAATCTTATCTAGGAAACATGTA 57.723 33.333 0.00 0.00 0.00 2.29
4267 6910 7.776969 ACATGCAATCTTATCTAGGAAACATGT 59.223 33.333 0.00 0.00 38.60 3.21
4268 6911 8.074370 CACATGCAATCTTATCTAGGAAACATG 58.926 37.037 0.00 0.00 36.85 3.21
4269 6912 7.776969 ACACATGCAATCTTATCTAGGAAACAT 59.223 33.333 0.00 0.00 0.00 2.71
4270 6913 7.112122 ACACATGCAATCTTATCTAGGAAACA 58.888 34.615 0.00 0.00 0.00 2.83
4271 6914 7.559590 ACACATGCAATCTTATCTAGGAAAC 57.440 36.000 0.00 0.00 0.00 2.78
4272 6915 9.276590 CATACACATGCAATCTTATCTAGGAAA 57.723 33.333 0.00 0.00 0.00 3.13
4273 6916 8.432013 ACATACACATGCAATCTTATCTAGGAA 58.568 33.333 0.00 0.00 35.39 3.36
4274 6917 7.966812 ACATACACATGCAATCTTATCTAGGA 58.033 34.615 0.00 0.00 35.39 2.94
4275 6918 9.710900 TTACATACACATGCAATCTTATCTAGG 57.289 33.333 0.00 0.00 35.39 3.02
4286 6929 9.845740 AGAGGTATAATTTACATACACATGCAA 57.154 29.630 0.00 0.00 35.39 4.08
4344 6987 8.508875 GCAATTTTGGATGAAGTTGAATTCAAT 58.491 29.630 23.05 9.03 42.21 2.57
4345 6988 7.716123 AGCAATTTTGGATGAAGTTGAATTCAA 59.284 29.630 16.91 16.91 42.21 2.69
4346 6989 7.171848 CAGCAATTTTGGATGAAGTTGAATTCA 59.828 33.333 3.38 3.38 43.04 2.57
4347 6990 7.360607 CCAGCAATTTTGGATGAAGTTGAATTC 60.361 37.037 0.00 0.00 37.96 2.17
4348 6991 6.428771 CCAGCAATTTTGGATGAAGTTGAATT 59.571 34.615 0.23 0.00 37.96 2.17
4349 6992 5.935789 CCAGCAATTTTGGATGAAGTTGAAT 59.064 36.000 0.23 0.00 37.96 2.57
4350 6993 5.070180 TCCAGCAATTTTGGATGAAGTTGAA 59.930 36.000 4.65 0.00 39.74 2.69
4351 6994 4.588106 TCCAGCAATTTTGGATGAAGTTGA 59.412 37.500 4.65 0.00 39.74 3.18
4352 6995 4.885413 TCCAGCAATTTTGGATGAAGTTG 58.115 39.130 4.65 0.00 39.74 3.16
4353 6996 5.549742 TTCCAGCAATTTTGGATGAAGTT 57.450 34.783 8.82 0.00 43.87 2.66
4354 6997 5.163322 TGTTTCCAGCAATTTTGGATGAAGT 60.163 36.000 8.82 0.00 43.87 3.01
4355 6998 5.178067 GTGTTTCCAGCAATTTTGGATGAAG 59.822 40.000 8.82 0.00 43.87 3.02
4356 6999 5.055812 GTGTTTCCAGCAATTTTGGATGAA 58.944 37.500 8.82 0.60 43.87 2.57
4357 7000 4.502950 GGTGTTTCCAGCAATTTTGGATGA 60.503 41.667 8.82 0.57 43.87 2.92
4358 7001 3.747529 GGTGTTTCCAGCAATTTTGGATG 59.252 43.478 8.82 0.00 43.87 3.51
4359 7002 3.647590 AGGTGTTTCCAGCAATTTTGGAT 59.352 39.130 8.82 0.00 43.87 3.41
4360 7003 3.037549 AGGTGTTTCCAGCAATTTTGGA 58.962 40.909 4.65 4.65 42.81 3.53
4361 7004 3.392882 GAGGTGTTTCCAGCAATTTTGG 58.607 45.455 0.12 0.12 41.60 3.28
4362 7005 3.392882 GGAGGTGTTTCCAGCAATTTTG 58.607 45.455 0.00 0.00 41.60 2.44
4363 7006 2.035832 CGGAGGTGTTTCCAGCAATTTT 59.964 45.455 0.00 0.00 41.60 1.82
4364 7007 1.613437 CGGAGGTGTTTCCAGCAATTT 59.387 47.619 0.00 0.00 41.60 1.82
4365 7008 1.247567 CGGAGGTGTTTCCAGCAATT 58.752 50.000 0.00 0.00 41.60 2.32
4366 7009 0.110486 ACGGAGGTGTTTCCAGCAAT 59.890 50.000 0.00 0.00 41.60 3.56
4367 7010 0.817634 CACGGAGGTGTTTCCAGCAA 60.818 55.000 0.00 0.00 41.60 3.91
4368 7011 1.227823 CACGGAGGTGTTTCCAGCA 60.228 57.895 0.00 0.00 41.60 4.41
4369 7012 1.966451 CCACGGAGGTGTTTCCAGC 60.966 63.158 0.00 0.00 42.80 4.85
4370 7013 1.302511 CCCACGGAGGTGTTTCCAG 60.303 63.158 0.00 0.00 42.80 3.86
4371 7014 1.637724 AACCCACGGAGGTGTTTCCA 61.638 55.000 0.00 0.00 42.80 3.53
4372 7015 0.466739 AAACCCACGGAGGTGTTTCC 60.467 55.000 0.00 0.00 42.80 3.13
4373 7016 0.666374 CAAACCCACGGAGGTGTTTC 59.334 55.000 0.00 0.00 42.80 2.78
4374 7017 0.753848 CCAAACCCACGGAGGTGTTT 60.754 55.000 0.00 5.04 42.80 2.83
4375 7018 1.152839 CCAAACCCACGGAGGTGTT 60.153 57.895 0.00 0.00 42.80 3.32
4376 7019 1.637724 TTCCAAACCCACGGAGGTGT 61.638 55.000 0.00 0.00 42.80 4.16
4377 7020 0.466555 TTTCCAAACCCACGGAGGTG 60.467 55.000 0.00 0.00 40.05 4.00
4378 7021 0.259356 TTTTCCAAACCCACGGAGGT 59.741 50.000 0.00 0.00 44.00 3.85
4379 7022 1.404843 TTTTTCCAAACCCACGGAGG 58.595 50.000 0.00 0.00 31.51 4.30
4380 7023 3.744238 AATTTTTCCAAACCCACGGAG 57.256 42.857 0.00 0.00 31.51 4.63
4381 7024 3.451178 TGAAATTTTTCCAAACCCACGGA 59.549 39.130 0.00 0.00 36.36 4.69
4382 7025 3.798202 TGAAATTTTTCCAAACCCACGG 58.202 40.909 0.00 0.00 36.36 4.94
4383 7026 4.688021 TCTGAAATTTTTCCAAACCCACG 58.312 39.130 0.00 0.00 36.36 4.94
4384 7027 6.993786 TTTCTGAAATTTTTCCAAACCCAC 57.006 33.333 0.00 0.00 36.36 4.61
4385 7028 6.375736 GGTTTTCTGAAATTTTTCCAAACCCA 59.624 34.615 19.22 0.00 40.47 4.51
4386 7029 6.791303 GGTTTTCTGAAATTTTTCCAAACCC 58.209 36.000 19.22 10.32 40.47 4.11
4387 7030 6.601613 AGGGTTTTCTGAAATTTTTCCAAACC 59.398 34.615 20.44 20.44 42.60 3.27
4388 7031 7.120579 ACAGGGTTTTCTGAAATTTTTCCAAAC 59.879 33.333 3.31 7.11 38.11 2.93
4389 7032 7.171653 ACAGGGTTTTCTGAAATTTTTCCAAA 58.828 30.769 3.31 0.00 38.11 3.28
4390 7033 6.716284 ACAGGGTTTTCTGAAATTTTTCCAA 58.284 32.000 3.31 0.00 38.11 3.53
4391 7034 6.070538 TGACAGGGTTTTCTGAAATTTTTCCA 60.071 34.615 3.31 0.00 38.11 3.53
4392 7035 6.345298 TGACAGGGTTTTCTGAAATTTTTCC 58.655 36.000 3.31 2.46 38.11 3.13
4393 7036 7.333174 TGTTGACAGGGTTTTCTGAAATTTTTC 59.667 33.333 3.31 0.00 38.11 2.29
4394 7037 7.164803 TGTTGACAGGGTTTTCTGAAATTTTT 58.835 30.769 3.31 0.00 38.11 1.94
4395 7038 6.706295 TGTTGACAGGGTTTTCTGAAATTTT 58.294 32.000 3.31 0.00 38.11 1.82
4396 7039 6.293004 TGTTGACAGGGTTTTCTGAAATTT 57.707 33.333 3.31 0.00 38.11 1.82
4397 7040 5.930837 TGTTGACAGGGTTTTCTGAAATT 57.069 34.783 3.31 0.00 38.11 1.82
4398 7041 5.930837 TTGTTGACAGGGTTTTCTGAAAT 57.069 34.783 3.31 0.00 38.11 2.17
4399 7042 5.730296 TTTGTTGACAGGGTTTTCTGAAA 57.270 34.783 0.00 0.00 38.11 2.69
4400 7043 5.930837 ATTTGTTGACAGGGTTTTCTGAA 57.069 34.783 0.00 0.00 38.11 3.02
4401 7044 5.930837 AATTTGTTGACAGGGTTTTCTGA 57.069 34.783 0.00 0.00 38.11 3.27
4402 7045 6.035975 GTGAAATTTGTTGACAGGGTTTTCTG 59.964 38.462 0.00 0.00 40.40 3.02
4403 7046 6.106003 GTGAAATTTGTTGACAGGGTTTTCT 58.894 36.000 0.00 0.00 0.00 2.52
4404 7047 5.293324 GGTGAAATTTGTTGACAGGGTTTTC 59.707 40.000 0.00 0.00 0.00 2.29
4405 7048 5.045942 AGGTGAAATTTGTTGACAGGGTTTT 60.046 36.000 0.00 0.00 0.00 2.43
4406 7049 4.469586 AGGTGAAATTTGTTGACAGGGTTT 59.530 37.500 0.00 0.00 0.00 3.27
4407 7050 4.030216 AGGTGAAATTTGTTGACAGGGTT 58.970 39.130 0.00 0.00 0.00 4.11
4408 7051 3.642141 AGGTGAAATTTGTTGACAGGGT 58.358 40.909 0.00 0.00 0.00 4.34
4409 7052 4.670896 AAGGTGAAATTTGTTGACAGGG 57.329 40.909 0.00 0.00 0.00 4.45
4410 7053 5.523552 GGAAAAGGTGAAATTTGTTGACAGG 59.476 40.000 0.00 0.00 0.00 4.00
4411 7054 5.523552 GGGAAAAGGTGAAATTTGTTGACAG 59.476 40.000 0.00 0.00 0.00 3.51
4412 7055 5.046304 TGGGAAAAGGTGAAATTTGTTGACA 60.046 36.000 0.00 0.00 0.00 3.58
4413 7056 5.423886 TGGGAAAAGGTGAAATTTGTTGAC 58.576 37.500 0.00 0.00 0.00 3.18
4414 7057 5.423610 TCTGGGAAAAGGTGAAATTTGTTGA 59.576 36.000 0.00 0.00 0.00 3.18
4415 7058 5.669477 TCTGGGAAAAGGTGAAATTTGTTG 58.331 37.500 0.00 0.00 0.00 3.33
4416 7059 5.948742 TCTGGGAAAAGGTGAAATTTGTT 57.051 34.783 0.00 0.00 0.00 2.83
4417 7060 5.425217 ACTTCTGGGAAAAGGTGAAATTTGT 59.575 36.000 0.00 0.00 0.00 2.83
4418 7061 5.754890 CACTTCTGGGAAAAGGTGAAATTTG 59.245 40.000 0.00 0.00 0.00 2.32
4419 7062 5.425217 ACACTTCTGGGAAAAGGTGAAATTT 59.575 36.000 0.00 0.00 0.00 1.82
4420 7063 4.962362 ACACTTCTGGGAAAAGGTGAAATT 59.038 37.500 0.00 0.00 0.00 1.82
4421 7064 4.546674 ACACTTCTGGGAAAAGGTGAAAT 58.453 39.130 0.00 0.00 0.00 2.17
4422 7065 3.976015 ACACTTCTGGGAAAAGGTGAAA 58.024 40.909 0.00 0.00 0.00 2.69
4423 7066 3.662759 ACACTTCTGGGAAAAGGTGAA 57.337 42.857 0.00 0.00 0.00 3.18
4424 7067 3.662759 AACACTTCTGGGAAAAGGTGA 57.337 42.857 0.00 0.00 0.00 4.02
4425 7068 4.827284 ACATAACACTTCTGGGAAAAGGTG 59.173 41.667 0.00 0.00 0.00 4.00
4426 7069 5.061721 ACATAACACTTCTGGGAAAAGGT 57.938 39.130 0.00 0.00 0.00 3.50
4427 7070 5.316987 AGACATAACACTTCTGGGAAAAGG 58.683 41.667 0.00 0.00 0.00 3.11
4428 7071 6.884280 AAGACATAACACTTCTGGGAAAAG 57.116 37.500 0.00 0.00 0.00 2.27
4429 7072 6.264518 GGAAAGACATAACACTTCTGGGAAAA 59.735 38.462 0.00 0.00 0.00 2.29
4430 7073 5.768164 GGAAAGACATAACACTTCTGGGAAA 59.232 40.000 0.00 0.00 0.00 3.13
4431 7074 5.073144 AGGAAAGACATAACACTTCTGGGAA 59.927 40.000 0.00 0.00 0.00 3.97
4432 7075 4.597507 AGGAAAGACATAACACTTCTGGGA 59.402 41.667 0.00 0.00 0.00 4.37
4433 7076 4.911390 AGGAAAGACATAACACTTCTGGG 58.089 43.478 0.00 0.00 0.00 4.45
4434 7077 5.335191 GCAAGGAAAGACATAACACTTCTGG 60.335 44.000 0.00 0.00 0.00 3.86
4435 7078 5.335191 GGCAAGGAAAGACATAACACTTCTG 60.335 44.000 0.00 0.00 0.00 3.02
4436 7079 4.762251 GGCAAGGAAAGACATAACACTTCT 59.238 41.667 0.00 0.00 0.00 2.85
4437 7080 4.762251 AGGCAAGGAAAGACATAACACTTC 59.238 41.667 0.00 0.00 0.00 3.01
4438 7081 4.729868 AGGCAAGGAAAGACATAACACTT 58.270 39.130 0.00 0.00 0.00 3.16
4439 7082 4.373156 AGGCAAGGAAAGACATAACACT 57.627 40.909 0.00 0.00 0.00 3.55
4440 7083 5.221244 ACAAAGGCAAGGAAAGACATAACAC 60.221 40.000 0.00 0.00 0.00 3.32
4441 7084 4.892934 ACAAAGGCAAGGAAAGACATAACA 59.107 37.500 0.00 0.00 0.00 2.41
4442 7085 5.453567 ACAAAGGCAAGGAAAGACATAAC 57.546 39.130 0.00 0.00 0.00 1.89
4443 7086 7.775053 ATAACAAAGGCAAGGAAAGACATAA 57.225 32.000 0.00 0.00 0.00 1.90
4444 7087 7.669722 AGAATAACAAAGGCAAGGAAAGACATA 59.330 33.333 0.00 0.00 0.00 2.29
4445 7088 6.494835 AGAATAACAAAGGCAAGGAAAGACAT 59.505 34.615 0.00 0.00 0.00 3.06
4446 7089 5.833131 AGAATAACAAAGGCAAGGAAAGACA 59.167 36.000 0.00 0.00 0.00 3.41
4447 7090 6.016276 TGAGAATAACAAAGGCAAGGAAAGAC 60.016 38.462 0.00 0.00 0.00 3.01
4448 7091 6.068010 TGAGAATAACAAAGGCAAGGAAAGA 58.932 36.000 0.00 0.00 0.00 2.52
4449 7092 6.331369 TGAGAATAACAAAGGCAAGGAAAG 57.669 37.500 0.00 0.00 0.00 2.62
4450 7093 6.723298 TTGAGAATAACAAAGGCAAGGAAA 57.277 33.333 0.00 0.00 0.00 3.13
4451 7094 6.916360 ATTGAGAATAACAAAGGCAAGGAA 57.084 33.333 0.00 0.00 0.00 3.36
4452 7095 6.916360 AATTGAGAATAACAAAGGCAAGGA 57.084 33.333 0.00 0.00 0.00 3.36
4453 7096 7.381323 AGAAATTGAGAATAACAAAGGCAAGG 58.619 34.615 0.00 0.00 0.00 3.61
4468 7111 9.369904 GCCTTTTTGCAATTATAGAAATTGAGA 57.630 29.630 13.22 0.03 39.36 3.27
4469 7112 9.153721 TGCCTTTTTGCAATTATAGAAATTGAG 57.846 29.630 13.22 2.99 39.36 3.02
4470 7113 9.153721 CTGCCTTTTTGCAATTATAGAAATTGA 57.846 29.630 13.22 0.00 41.51 2.57
4471 7114 9.153721 TCTGCCTTTTTGCAATTATAGAAATTG 57.846 29.630 0.00 6.18 41.51 2.32
4472 7115 9.374838 CTCTGCCTTTTTGCAATTATAGAAATT 57.625 29.630 0.00 0.00 41.51 1.82
4473 7116 8.752187 TCTCTGCCTTTTTGCAATTATAGAAAT 58.248 29.630 0.00 0.00 41.51 2.17
4474 7117 8.121305 TCTCTGCCTTTTTGCAATTATAGAAA 57.879 30.769 0.00 0.00 41.51 2.52
4475 7118 7.701539 TCTCTGCCTTTTTGCAATTATAGAA 57.298 32.000 0.00 0.00 41.51 2.10
4476 7119 7.701539 TTCTCTGCCTTTTTGCAATTATAGA 57.298 32.000 0.00 0.00 41.51 1.98


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.