Multiple sequence alignment - TraesCS6A01G006900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G006900 chr6A 100.000 2597 0 0 1 2597 2748268 2750864 0.000000e+00 4796.0
1 TraesCS6A01G006900 chr6A 94.211 380 21 1 1927 2305 13876666 13877045 1.730000e-161 579.0
2 TraesCS6A01G006900 chr6D 90.535 1384 75 24 583 1925 4289703 4291071 0.000000e+00 1779.0
3 TraesCS6A01G006900 chr6D 81.329 316 28 16 2306 2597 4291074 4291382 7.230000e-56 228.0
4 TraesCS6A01G006900 chr6B 85.510 1401 99 47 613 1929 8412747 8411367 0.000000e+00 1367.0
5 TraesCS6A01G006900 chr6B 94.211 380 21 1 1927 2305 160709896 160709517 1.730000e-161 579.0
6 TraesCS6A01G006900 chr6B 88.757 169 13 3 272 436 8413163 8412997 4.380000e-48 202.0
7 TraesCS6A01G006900 chr6B 90.541 148 11 3 2453 2597 8411334 8411187 2.640000e-45 193.0
8 TraesCS6A01G006900 chr5B 94.211 380 21 1 1926 2304 63249156 63248777 1.730000e-161 579.0
9 TraesCS6A01G006900 chr4A 93.367 392 25 1 1920 2310 718849416 718849807 1.730000e-161 579.0
10 TraesCS6A01G006900 chr3B 94.211 380 21 1 1927 2305 33340215 33340594 1.730000e-161 579.0
11 TraesCS6A01G006900 chr3B 82.407 108 14 3 1440 1545 749038557 749038661 3.560000e-14 89.8
12 TraesCS6A01G006900 chr2B 94.211 380 21 1 1926 2304 33735670 33736049 1.730000e-161 579.0
13 TraesCS6A01G006900 chr2B 71.652 575 108 37 11 553 161384169 161384720 9.830000e-20 108.0
14 TraesCS6A01G006900 chr1B 94.211 380 21 1 1926 2304 6112052 6112431 1.730000e-161 579.0
15 TraesCS6A01G006900 chr1B 94.211 380 21 1 1926 2304 681552408 681552787 1.730000e-161 579.0
16 TraesCS6A01G006900 chr1B 93.112 392 25 2 1924 2314 119248320 119248710 8.060000e-160 573.0
17 TraesCS6A01G006900 chr3A 77.395 261 42 10 12 268 177707539 177707292 3.480000e-29 139.0
18 TraesCS6A01G006900 chr3A 90.426 94 8 1 2478 2570 476657169 476657076 3.510000e-24 122.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G006900 chr6A 2748268 2750864 2596 False 4796.000000 4796 100.000000 1 2597 1 chr6A.!!$F1 2596
1 TraesCS6A01G006900 chr6D 4289703 4291382 1679 False 1003.500000 1779 85.932000 583 2597 2 chr6D.!!$F1 2014
2 TraesCS6A01G006900 chr6B 8411187 8413163 1976 True 587.333333 1367 88.269333 272 2597 3 chr6B.!!$R2 2325

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
54 55 0.035439 GCTCCTCCCATCGTTCCAAA 60.035 55.0 0.0 0.0 0.0 3.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1975 2234 0.106149 ATCGAGGGGCACGGAAATAC 59.894 55.0 0.0 0.0 0.0 1.89 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.539842 GGGACCTCCTCGTCATCC 58.460 66.667 0.00 0.00 34.24 3.51
22 23 2.134933 GGGACCTCCTCGTCATCCC 61.135 68.421 0.00 0.00 42.30 3.85
23 24 1.075896 GGACCTCCTCGTCATCCCT 60.076 63.158 0.00 0.00 34.24 4.20
24 25 0.185416 GGACCTCCTCGTCATCCCTA 59.815 60.000 0.00 0.00 34.24 3.53
25 26 1.611519 GACCTCCTCGTCATCCCTAG 58.388 60.000 0.00 0.00 32.74 3.02
26 27 0.468400 ACCTCCTCGTCATCCCTAGC 60.468 60.000 0.00 0.00 0.00 3.42
27 28 1.182385 CCTCCTCGTCATCCCTAGCC 61.182 65.000 0.00 0.00 0.00 3.93
28 29 1.152525 TCCTCGTCATCCCTAGCCC 60.153 63.158 0.00 0.00 0.00 5.19
29 30 2.565645 CCTCGTCATCCCTAGCCCG 61.566 68.421 0.00 0.00 0.00 6.13
30 31 2.520982 TCGTCATCCCTAGCCCGG 60.521 66.667 0.00 0.00 0.00 5.73
31 32 4.301027 CGTCATCCCTAGCCCGGC 62.301 72.222 0.00 0.00 0.00 6.13
32 33 4.301027 GTCATCCCTAGCCCGGCG 62.301 72.222 3.05 0.00 0.00 6.46
33 34 4.853142 TCATCCCTAGCCCGGCGT 62.853 66.667 6.01 0.00 0.00 5.68
34 35 4.301027 CATCCCTAGCCCGGCGTC 62.301 72.222 6.01 0.00 0.00 5.19
46 47 4.593864 GGCGTCGCTCCTCCCATC 62.594 72.222 18.11 0.00 0.00 3.51
47 48 4.933064 GCGTCGCTCCTCCCATCG 62.933 72.222 10.68 0.00 0.00 3.84
48 49 3.518998 CGTCGCTCCTCCCATCGT 61.519 66.667 0.00 0.00 0.00 3.73
49 50 2.893398 GTCGCTCCTCCCATCGTT 59.107 61.111 0.00 0.00 0.00 3.85
50 51 1.227002 GTCGCTCCTCCCATCGTTC 60.227 63.158 0.00 0.00 0.00 3.95
51 52 2.107141 CGCTCCTCCCATCGTTCC 59.893 66.667 0.00 0.00 0.00 3.62
52 53 2.721167 CGCTCCTCCCATCGTTCCA 61.721 63.158 0.00 0.00 0.00 3.53
53 54 1.602237 GCTCCTCCCATCGTTCCAA 59.398 57.895 0.00 0.00 0.00 3.53
54 55 0.035439 GCTCCTCCCATCGTTCCAAA 60.035 55.000 0.00 0.00 0.00 3.28
55 56 1.739067 CTCCTCCCATCGTTCCAAAC 58.261 55.000 0.00 0.00 0.00 2.93
56 57 0.326927 TCCTCCCATCGTTCCAAACC 59.673 55.000 0.00 0.00 0.00 3.27
57 58 0.037590 CCTCCCATCGTTCCAAACCA 59.962 55.000 0.00 0.00 0.00 3.67
58 59 1.453155 CTCCCATCGTTCCAAACCAG 58.547 55.000 0.00 0.00 0.00 4.00
59 60 0.037590 TCCCATCGTTCCAAACCAGG 59.962 55.000 0.00 0.00 0.00 4.45
60 61 0.037590 CCCATCGTTCCAAACCAGGA 59.962 55.000 0.00 0.00 35.41 3.86
61 62 1.453155 CCATCGTTCCAAACCAGGAG 58.547 55.000 0.00 0.00 39.25 3.69
62 63 0.804989 CATCGTTCCAAACCAGGAGC 59.195 55.000 0.00 0.00 39.25 4.70
63 64 0.400213 ATCGTTCCAAACCAGGAGCA 59.600 50.000 0.00 0.00 38.66 4.26
64 65 0.181587 TCGTTCCAAACCAGGAGCAA 59.818 50.000 0.00 0.00 38.66 3.91
65 66 1.028905 CGTTCCAAACCAGGAGCAAA 58.971 50.000 0.00 0.00 38.66 3.68
66 67 1.001378 CGTTCCAAACCAGGAGCAAAG 60.001 52.381 0.00 0.00 38.66 2.77
67 68 2.031870 GTTCCAAACCAGGAGCAAAGT 58.968 47.619 0.00 0.00 39.25 2.66
68 69 2.430694 GTTCCAAACCAGGAGCAAAGTT 59.569 45.455 0.00 0.00 39.25 2.66
69 70 2.031120 TCCAAACCAGGAGCAAAGTTG 58.969 47.619 0.00 0.00 32.77 3.16
70 71 1.069049 CCAAACCAGGAGCAAAGTTGG 59.931 52.381 0.00 0.00 36.76 3.77
71 72 2.031120 CAAACCAGGAGCAAAGTTGGA 58.969 47.619 0.00 0.00 34.76 3.53
72 73 2.430332 CAAACCAGGAGCAAAGTTGGAA 59.570 45.455 0.00 0.00 34.76 3.53
73 74 1.692411 ACCAGGAGCAAAGTTGGAAC 58.308 50.000 0.00 0.00 34.76 3.62
74 75 1.064017 ACCAGGAGCAAAGTTGGAACA 60.064 47.619 0.00 0.00 34.76 3.18
87 88 1.124780 TGGAACAAACTCGGAGGACA 58.875 50.000 10.23 0.00 31.92 4.02
88 89 1.202604 TGGAACAAACTCGGAGGACAC 60.203 52.381 10.23 0.00 31.92 3.67
89 90 1.202604 GGAACAAACTCGGAGGACACA 60.203 52.381 10.23 0.00 0.00 3.72
90 91 2.550208 GGAACAAACTCGGAGGACACAT 60.550 50.000 10.23 0.00 0.00 3.21
91 92 3.306502 GGAACAAACTCGGAGGACACATA 60.307 47.826 10.23 0.00 0.00 2.29
92 93 3.314541 ACAAACTCGGAGGACACATAC 57.685 47.619 10.23 0.00 0.00 2.39
93 94 2.631062 ACAAACTCGGAGGACACATACA 59.369 45.455 10.23 0.00 0.00 2.29
94 95 2.993899 CAAACTCGGAGGACACATACAC 59.006 50.000 10.23 0.00 0.00 2.90
95 96 1.919240 ACTCGGAGGACACATACACA 58.081 50.000 10.23 0.00 0.00 3.72
96 97 1.819288 ACTCGGAGGACACATACACAG 59.181 52.381 10.23 0.00 0.00 3.66
97 98 2.092323 CTCGGAGGACACATACACAGA 58.908 52.381 0.00 0.00 0.00 3.41
98 99 2.092323 TCGGAGGACACATACACAGAG 58.908 52.381 0.00 0.00 0.00 3.35
99 100 2.092323 CGGAGGACACATACACAGAGA 58.908 52.381 0.00 0.00 0.00 3.10
100 101 2.492088 CGGAGGACACATACACAGAGAA 59.508 50.000 0.00 0.00 0.00 2.87
101 102 3.056821 CGGAGGACACATACACAGAGAAA 60.057 47.826 0.00 0.00 0.00 2.52
102 103 4.560716 CGGAGGACACATACACAGAGAAAA 60.561 45.833 0.00 0.00 0.00 2.29
103 104 5.305585 GGAGGACACATACACAGAGAAAAA 58.694 41.667 0.00 0.00 0.00 1.94
104 105 5.409826 GGAGGACACATACACAGAGAAAAAG 59.590 44.000 0.00 0.00 0.00 2.27
105 106 5.930135 AGGACACATACACAGAGAAAAAGT 58.070 37.500 0.00 0.00 0.00 2.66
106 107 6.357367 AGGACACATACACAGAGAAAAAGTT 58.643 36.000 0.00 0.00 0.00 2.66
107 108 6.483640 AGGACACATACACAGAGAAAAAGTTC 59.516 38.462 0.00 0.00 0.00 3.01
108 109 6.260050 GGACACATACACAGAGAAAAAGTTCA 59.740 38.462 0.00 0.00 36.09 3.18
109 110 7.201696 GGACACATACACAGAGAAAAAGTTCAA 60.202 37.037 0.00 0.00 36.09 2.69
110 111 8.225603 ACACATACACAGAGAAAAAGTTCAAT 57.774 30.769 0.00 0.00 36.09 2.57
111 112 8.131100 ACACATACACAGAGAAAAAGTTCAATG 58.869 33.333 0.00 0.00 36.09 2.82
112 113 8.131100 CACATACACAGAGAAAAAGTTCAATGT 58.869 33.333 0.00 0.00 35.97 2.71
113 114 9.337396 ACATACACAGAGAAAAAGTTCAATGTA 57.663 29.630 0.00 0.00 34.64 2.29
114 115 9.599322 CATACACAGAGAAAAAGTTCAATGTAC 57.401 33.333 0.00 0.00 34.64 2.90
115 116 7.624360 ACACAGAGAAAAAGTTCAATGTACA 57.376 32.000 0.00 0.00 34.64 2.90
116 117 8.050778 ACACAGAGAAAAAGTTCAATGTACAA 57.949 30.769 0.00 0.00 34.64 2.41
117 118 8.184192 ACACAGAGAAAAAGTTCAATGTACAAG 58.816 33.333 0.00 0.00 34.64 3.16
118 119 8.397906 CACAGAGAAAAAGTTCAATGTACAAGA 58.602 33.333 0.00 0.00 34.64 3.02
119 120 8.956426 ACAGAGAAAAAGTTCAATGTACAAGAA 58.044 29.630 0.00 4.77 34.64 2.52
120 121 9.443283 CAGAGAAAAAGTTCAATGTACAAGAAG 57.557 33.333 12.72 0.00 36.09 2.85
121 122 8.624776 AGAGAAAAAGTTCAATGTACAAGAAGG 58.375 33.333 12.72 0.00 36.09 3.46
122 123 8.519799 AGAAAAAGTTCAATGTACAAGAAGGA 57.480 30.769 12.72 0.00 36.09 3.36
123 124 8.966868 AGAAAAAGTTCAATGTACAAGAAGGAA 58.033 29.630 12.72 4.69 36.09 3.36
124 125 9.581099 GAAAAAGTTCAATGTACAAGAAGGAAA 57.419 29.630 12.72 0.00 33.61 3.13
125 126 9.936759 AAAAAGTTCAATGTACAAGAAGGAAAA 57.063 25.926 12.72 0.00 0.00 2.29
139 140 8.049721 ACAAGAAGGAAAATATAGGAAGAGTGG 58.950 37.037 0.00 0.00 0.00 4.00
140 141 7.996758 AGAAGGAAAATATAGGAAGAGTGGA 57.003 36.000 0.00 0.00 0.00 4.02
141 142 8.574309 AGAAGGAAAATATAGGAAGAGTGGAT 57.426 34.615 0.00 0.00 0.00 3.41
142 143 8.435982 AGAAGGAAAATATAGGAAGAGTGGATG 58.564 37.037 0.00 0.00 0.00 3.51
143 144 6.538263 AGGAAAATATAGGAAGAGTGGATGC 58.462 40.000 0.00 0.00 0.00 3.91
144 145 6.101734 AGGAAAATATAGGAAGAGTGGATGCA 59.898 38.462 0.00 0.00 0.00 3.96
145 146 6.944862 GGAAAATATAGGAAGAGTGGATGCAT 59.055 38.462 0.00 0.00 0.00 3.96
146 147 7.094463 GGAAAATATAGGAAGAGTGGATGCATG 60.094 40.741 2.46 0.00 0.00 4.06
147 148 6.445451 AATATAGGAAGAGTGGATGCATGT 57.555 37.500 2.46 0.00 0.00 3.21
148 149 2.706339 AGGAAGAGTGGATGCATGTC 57.294 50.000 2.46 0.00 0.00 3.06
149 150 1.134580 AGGAAGAGTGGATGCATGTCG 60.135 52.381 2.46 0.00 0.00 4.35
150 151 0.654683 GAAGAGTGGATGCATGTCGC 59.345 55.000 2.46 2.73 42.89 5.19
151 152 0.745845 AAGAGTGGATGCATGTCGCC 60.746 55.000 2.46 0.00 41.33 5.54
152 153 1.450134 GAGTGGATGCATGTCGCCA 60.450 57.895 2.46 1.44 41.33 5.69
153 154 0.816825 GAGTGGATGCATGTCGCCAT 60.817 55.000 2.46 0.00 41.33 4.40
154 155 0.394762 AGTGGATGCATGTCGCCATT 60.395 50.000 2.46 0.00 41.33 3.16
155 156 0.248743 GTGGATGCATGTCGCCATTG 60.249 55.000 2.46 0.00 41.33 2.82
156 157 1.299620 GGATGCATGTCGCCATTGC 60.300 57.895 2.46 0.00 41.33 3.56
157 158 1.299620 GATGCATGTCGCCATTGCC 60.300 57.895 2.46 0.00 41.33 4.52
158 159 2.994143 GATGCATGTCGCCATTGCCG 62.994 60.000 2.46 0.00 41.33 5.69
159 160 3.507924 GCATGTCGCCATTGCCGA 61.508 61.111 0.00 0.00 32.94 5.54
160 161 2.837883 GCATGTCGCCATTGCCGAT 61.838 57.895 0.00 0.00 37.04 4.18
161 162 1.729276 CATGTCGCCATTGCCGATT 59.271 52.632 0.00 0.00 37.04 3.34
162 163 0.317269 CATGTCGCCATTGCCGATTC 60.317 55.000 0.00 0.00 37.04 2.52
163 164 1.447317 ATGTCGCCATTGCCGATTCC 61.447 55.000 0.00 0.00 37.04 3.01
164 165 2.894879 TCGCCATTGCCGATTCCG 60.895 61.111 0.00 0.00 0.00 4.30
165 166 2.894879 CGCCATTGCCGATTCCGA 60.895 61.111 0.00 0.00 38.22 4.55
166 167 2.253758 CGCCATTGCCGATTCCGAT 61.254 57.895 0.00 0.00 38.22 4.18
167 168 1.283793 GCCATTGCCGATTCCGATG 59.716 57.895 0.00 0.00 38.22 3.84
168 169 1.165907 GCCATTGCCGATTCCGATGA 61.166 55.000 0.00 0.00 38.22 2.92
169 170 1.308047 CCATTGCCGATTCCGATGAA 58.692 50.000 0.00 0.00 38.22 2.57
170 171 1.881973 CCATTGCCGATTCCGATGAAT 59.118 47.619 0.00 0.00 43.91 2.57
181 182 3.447918 TCCGATGAATCCTTACGTTCC 57.552 47.619 0.00 0.00 0.00 3.62
182 183 2.101917 TCCGATGAATCCTTACGTTCCC 59.898 50.000 0.00 0.00 0.00 3.97
183 184 2.124903 CGATGAATCCTTACGTTCCCG 58.875 52.381 0.00 0.00 40.83 5.14
184 185 2.480845 GATGAATCCTTACGTTCCCGG 58.519 52.381 0.00 0.00 38.78 5.73
185 186 0.538118 TGAATCCTTACGTTCCCGGG 59.462 55.000 16.85 16.85 38.78 5.73
186 187 0.812811 GAATCCTTACGTTCCCGGGC 60.813 60.000 18.49 0.59 38.78 6.13
187 188 2.582734 AATCCTTACGTTCCCGGGCG 62.583 60.000 18.49 18.04 38.78 6.13
188 189 4.825252 CCTTACGTTCCCGGGCGG 62.825 72.222 18.49 9.89 38.78 6.13
189 190 4.073200 CTTACGTTCCCGGGCGGT 62.073 66.667 18.49 15.75 38.78 5.68
190 191 4.376176 TTACGTTCCCGGGCGGTG 62.376 66.667 18.49 8.05 38.78 4.94
206 207 2.566824 GTGCCATAACACCACTGGG 58.433 57.895 0.00 0.00 41.29 4.45
207 208 0.037590 GTGCCATAACACCACTGGGA 59.962 55.000 0.00 0.00 38.05 4.37
208 209 0.327924 TGCCATAACACCACTGGGAG 59.672 55.000 0.00 0.00 38.05 4.30
209 210 0.618458 GCCATAACACCACTGGGAGA 59.382 55.000 0.00 0.00 38.05 3.71
210 211 1.004277 GCCATAACACCACTGGGAGAA 59.996 52.381 0.00 0.00 38.05 2.87
211 212 2.941415 GCCATAACACCACTGGGAGAAG 60.941 54.545 0.00 0.00 38.05 2.85
212 213 2.356125 CCATAACACCACTGGGAGAAGG 60.356 54.545 0.00 0.00 38.05 3.46
213 214 1.358152 TAACACCACTGGGAGAAGGG 58.642 55.000 0.00 0.00 38.05 3.95
214 215 0.697854 AACACCACTGGGAGAAGGGT 60.698 55.000 0.00 0.00 38.05 4.34
215 216 1.376466 CACCACTGGGAGAAGGGTG 59.624 63.158 0.00 0.00 42.57 4.61
216 217 1.238938 ACCACTGGGAGAAGGGTGA 59.761 57.895 0.00 0.00 38.05 4.02
217 218 0.838122 ACCACTGGGAGAAGGGTGAG 60.838 60.000 0.00 0.00 38.05 3.51
218 219 1.557269 CCACTGGGAGAAGGGTGAGG 61.557 65.000 0.00 0.00 35.59 3.86
219 220 1.229658 ACTGGGAGAAGGGTGAGGG 60.230 63.158 0.00 0.00 0.00 4.30
220 221 1.081092 CTGGGAGAAGGGTGAGGGA 59.919 63.158 0.00 0.00 0.00 4.20
221 222 1.229529 TGGGAGAAGGGTGAGGGAC 60.230 63.158 0.00 0.00 0.00 4.46
223 224 1.268283 GGGAGAAGGGTGAGGGACTG 61.268 65.000 0.00 0.00 41.55 3.51
224 225 0.252284 GGAGAAGGGTGAGGGACTGA 60.252 60.000 0.00 0.00 41.55 3.41
225 226 1.190643 GAGAAGGGTGAGGGACTGAG 58.809 60.000 0.00 0.00 41.55 3.35
226 227 0.252467 AGAAGGGTGAGGGACTGAGG 60.252 60.000 0.00 0.00 41.55 3.86
227 228 1.229658 AAGGGTGAGGGACTGAGGG 60.230 63.158 0.00 0.00 41.55 4.30
228 229 2.689034 GGGTGAGGGACTGAGGGG 60.689 72.222 0.00 0.00 41.55 4.79
229 230 2.450243 GGTGAGGGACTGAGGGGA 59.550 66.667 0.00 0.00 41.55 4.81
230 231 1.229529 GGTGAGGGACTGAGGGGAA 60.230 63.158 0.00 0.00 41.55 3.97
231 232 1.268283 GGTGAGGGACTGAGGGGAAG 61.268 65.000 0.00 0.00 41.55 3.46
232 233 0.252284 GTGAGGGACTGAGGGGAAGA 60.252 60.000 0.00 0.00 41.55 2.87
233 234 0.491823 TGAGGGACTGAGGGGAAGAA 59.508 55.000 0.00 0.00 41.55 2.52
234 235 0.906066 GAGGGACTGAGGGGAAGAAC 59.094 60.000 0.00 0.00 41.55 3.01
235 236 0.547954 AGGGACTGAGGGGAAGAACC 60.548 60.000 0.00 0.00 37.18 3.62
249 250 5.310409 GGAAGAACCCATTCATATGAGGA 57.690 43.478 14.68 0.00 37.29 3.71
250 251 5.694995 GGAAGAACCCATTCATATGAGGAA 58.305 41.667 14.68 0.00 37.29 3.36
251 252 5.767168 GGAAGAACCCATTCATATGAGGAAG 59.233 44.000 14.68 5.24 37.29 3.46
252 253 4.723309 AGAACCCATTCATATGAGGAAGC 58.277 43.478 14.68 5.22 37.29 3.86
253 254 3.131709 ACCCATTCATATGAGGAAGCG 57.868 47.619 14.68 1.30 33.37 4.68
254 255 1.808945 CCCATTCATATGAGGAAGCGC 59.191 52.381 11.66 0.00 33.37 5.92
255 256 1.808945 CCATTCATATGAGGAAGCGCC 59.191 52.381 2.29 0.00 33.37 6.53
256 257 1.808945 CATTCATATGAGGAAGCGCCC 59.191 52.381 2.29 0.00 37.37 6.13
257 258 0.836606 TTCATATGAGGAAGCGCCCA 59.163 50.000 2.29 0.00 37.37 5.36
258 259 0.836606 TCATATGAGGAAGCGCCCAA 59.163 50.000 2.29 0.00 37.37 4.12
259 260 1.202687 TCATATGAGGAAGCGCCCAAG 60.203 52.381 2.29 0.00 37.37 3.61
260 261 0.536006 ATATGAGGAAGCGCCCAAGC 60.536 55.000 2.29 0.00 37.37 4.01
261 262 2.608970 TATGAGGAAGCGCCCAAGCC 62.609 60.000 2.29 0.00 37.37 4.35
262 263 4.722700 GAGGAAGCGCCCAAGCCA 62.723 66.667 2.29 0.00 37.37 4.75
263 264 4.052518 AGGAAGCGCCCAAGCCAT 62.053 61.111 2.29 0.00 37.37 4.40
264 265 3.830192 GGAAGCGCCCAAGCCATG 61.830 66.667 2.29 0.00 38.01 3.66
295 296 6.403636 CGGAGGATGAATTTCAACTACTTTGG 60.404 42.308 2.68 0.00 35.69 3.28
297 298 7.039714 GGAGGATGAATTTCAACTACTTTGGTT 60.040 37.037 2.68 0.00 35.69 3.67
301 302 9.612620 GATGAATTTCAACTACTTTGGTTACTG 57.387 33.333 2.68 0.00 35.69 2.74
321 322 1.136611 GCTTCGTCACAAGCTTACGTG 60.137 52.381 17.27 13.78 44.71 4.49
322 323 2.124903 CTTCGTCACAAGCTTACGTGT 58.875 47.619 17.27 1.66 39.21 4.49
329 330 2.654912 AAGCTTACGTGTCGCGCAC 61.655 57.895 19.33 19.33 46.11 5.34
348 349 0.320374 CGGTGAGGCTACCTTTGTGA 59.680 55.000 10.19 0.00 38.62 3.58
355 356 3.440522 GAGGCTACCTTTGTGAAACATCC 59.559 47.826 0.00 0.00 40.08 3.51
384 389 4.650131 AGGTACTAGGTAGCTCATGGAAAC 59.350 45.833 0.00 0.00 42.16 2.78
386 391 2.772515 ACTAGGTAGCTCATGGAAACCC 59.227 50.000 0.00 0.00 0.00 4.11
430 435 1.542547 GGCCGTGTGAAAGGAAGAAGA 60.543 52.381 0.00 0.00 0.00 2.87
459 464 9.513906 AAAAATAAGAAAGAAAGAGGGAGAGAG 57.486 33.333 0.00 0.00 0.00 3.20
460 465 6.806668 ATAAGAAAGAAAGAGGGAGAGAGG 57.193 41.667 0.00 0.00 0.00 3.69
461 466 3.449918 AGAAAGAAAGAGGGAGAGAGGG 58.550 50.000 0.00 0.00 0.00 4.30
462 467 3.178046 GAAAGAAAGAGGGAGAGAGGGT 58.822 50.000 0.00 0.00 0.00 4.34
463 468 3.283712 AAGAAAGAGGGAGAGAGGGTT 57.716 47.619 0.00 0.00 0.00 4.11
465 470 3.603697 AGAAAGAGGGAGAGAGGGTTTT 58.396 45.455 0.00 0.00 0.00 2.43
466 471 4.764491 AGAAAGAGGGAGAGAGGGTTTTA 58.236 43.478 0.00 0.00 0.00 1.52
467 472 5.354848 AGAAAGAGGGAGAGAGGGTTTTAT 58.645 41.667 0.00 0.00 0.00 1.40
468 473 6.513033 AGAAAGAGGGAGAGAGGGTTTTATA 58.487 40.000 0.00 0.00 0.00 0.98
471 476 5.158889 AGAGGGAGAGAGGGTTTTATATGG 58.841 45.833 0.00 0.00 0.00 2.74
472 477 4.243643 AGGGAGAGAGGGTTTTATATGGG 58.756 47.826 0.00 0.00 0.00 4.00
474 479 4.852697 GGGAGAGAGGGTTTTATATGGGAT 59.147 45.833 0.00 0.00 0.00 3.85
475 480 6.030082 GGGAGAGAGGGTTTTATATGGGATA 58.970 44.000 0.00 0.00 0.00 2.59
476 481 6.678857 GGGAGAGAGGGTTTTATATGGGATAT 59.321 42.308 0.00 0.00 0.00 1.63
478 483 8.929487 GGAGAGAGGGTTTTATATGGGATATAG 58.071 40.741 0.00 0.00 0.00 1.31
479 484 9.495382 GAGAGAGGGTTTTATATGGGATATAGT 57.505 37.037 0.00 0.00 0.00 2.12
480 485 9.860393 AGAGAGGGTTTTATATGGGATATAGTT 57.140 33.333 0.00 0.00 0.00 2.24
483 488 8.445361 AGGGTTTTATATGGGATATAGTTCGT 57.555 34.615 0.00 0.00 0.00 3.85
485 490 9.511272 GGGTTTTATATGGGATATAGTTCGTTT 57.489 33.333 0.00 0.00 0.00 3.60
492 497 6.540438 TGGGATATAGTTCGTTTGAAGAGT 57.460 37.500 0.00 0.00 33.98 3.24
494 499 8.070034 TGGGATATAGTTCGTTTGAAGAGTTA 57.930 34.615 0.00 0.00 33.98 2.24
495 500 8.533657 TGGGATATAGTTCGTTTGAAGAGTTAA 58.466 33.333 0.00 0.00 33.98 2.01
496 501 9.032420 GGGATATAGTTCGTTTGAAGAGTTAAG 57.968 37.037 0.00 0.00 33.98 1.85
497 502 9.583765 GGATATAGTTCGTTTGAAGAGTTAAGT 57.416 33.333 0.00 0.00 33.98 2.24
504 657 9.634300 GTTCGTTTGAAGAGTTAAGTTTAAGAG 57.366 33.333 0.00 0.00 33.98 2.85
506 659 9.374838 TCGTTTGAAGAGTTAAGTTTAAGAGTT 57.625 29.630 0.00 0.00 0.00 3.01
511 664 9.886132 TGAAGAGTTAAGTTTAAGAGTTTCAGT 57.114 29.630 0.00 0.00 0.00 3.41
522 675 9.783256 GTTTAAGAGTTTCAGTTATGTTTGTGT 57.217 29.630 0.00 0.00 0.00 3.72
526 679 9.705290 AAGAGTTTCAGTTATGTTTGTGTTTTT 57.295 25.926 0.00 0.00 0.00 1.94
527 680 9.353999 AGAGTTTCAGTTATGTTTGTGTTTTTC 57.646 29.630 0.00 0.00 0.00 2.29
528 681 9.353999 GAGTTTCAGTTATGTTTGTGTTTTTCT 57.646 29.630 0.00 0.00 0.00 2.52
529 682 9.705290 AGTTTCAGTTATGTTTGTGTTTTTCTT 57.295 25.926 0.00 0.00 0.00 2.52
539 692 9.883142 ATGTTTGTGTTTTTCTTAATTCCTCAA 57.117 25.926 0.00 0.00 0.00 3.02
540 693 9.712305 TGTTTGTGTTTTTCTTAATTCCTCAAA 57.288 25.926 0.00 0.00 0.00 2.69
571 724 9.225682 AGAGTTAAGATATAAGGGTCCATTTCA 57.774 33.333 0.00 0.00 0.00 2.69
572 725 9.495572 GAGTTAAGATATAAGGGTCCATTTCAG 57.504 37.037 0.00 0.00 0.00 3.02
573 726 8.440771 AGTTAAGATATAAGGGTCCATTTCAGG 58.559 37.037 0.00 0.00 0.00 3.86
574 727 5.850046 AGATATAAGGGTCCATTTCAGGG 57.150 43.478 0.00 0.00 0.00 4.45
575 728 4.603610 AGATATAAGGGTCCATTTCAGGGG 59.396 45.833 0.00 0.00 0.00 4.79
576 729 0.629058 TAAGGGTCCATTTCAGGGGC 59.371 55.000 0.00 0.00 0.00 5.80
577 730 1.149133 AAGGGTCCATTTCAGGGGCT 61.149 55.000 0.00 0.00 0.00 5.19
578 731 0.253630 AGGGTCCATTTCAGGGGCTA 60.254 55.000 0.00 0.00 0.00 3.93
579 732 0.629058 GGGTCCATTTCAGGGGCTAA 59.371 55.000 0.00 0.00 0.00 3.09
580 733 1.006639 GGGTCCATTTCAGGGGCTAAA 59.993 52.381 0.00 0.00 0.00 1.85
581 734 2.359249 GGGTCCATTTCAGGGGCTAAAT 60.359 50.000 0.00 0.00 0.00 1.40
584 737 4.584743 GGTCCATTTCAGGGGCTAAATTAG 59.415 45.833 0.00 0.00 0.00 1.73
597 750 3.431766 GCTAAATTAGAAGGGACGGCTGA 60.432 47.826 3.88 0.00 0.00 4.26
603 756 2.244117 GAAGGGACGGCTGAGATGCA 62.244 60.000 0.00 0.00 34.04 3.96
640 801 2.809601 GTCGGCGTTGCTCGTGAT 60.810 61.111 6.85 0.00 42.13 3.06
679 840 0.397254 TCCCAATCGTCTCTCCTCCC 60.397 60.000 0.00 0.00 0.00 4.30
680 841 0.397816 CCCAATCGTCTCTCCTCCCT 60.398 60.000 0.00 0.00 0.00 4.20
681 842 1.036707 CCAATCGTCTCTCCTCCCTC 58.963 60.000 0.00 0.00 0.00 4.30
682 843 1.410932 CCAATCGTCTCTCCTCCCTCT 60.411 57.143 0.00 0.00 0.00 3.69
683 844 1.953686 CAATCGTCTCTCCTCCCTCTC 59.046 57.143 0.00 0.00 0.00 3.20
685 846 1.525077 CGTCTCTCCTCCCTCTCCG 60.525 68.421 0.00 0.00 0.00 4.63
688 849 1.528309 CTCTCCTCCCTCTCCGCTC 60.528 68.421 0.00 0.00 0.00 5.03
689 850 1.994885 CTCTCCTCCCTCTCCGCTCT 61.995 65.000 0.00 0.00 0.00 4.09
696 862 1.523258 CCTCTCCGCTCTTGCATGG 60.523 63.158 0.00 0.00 39.64 3.66
759 931 2.027192 TGGCTAAAAACAGGAGCTCGAT 60.027 45.455 7.83 0.00 36.43 3.59
771 943 3.032609 CTCGATCGTGATGCGGCC 61.033 66.667 15.94 0.00 41.72 6.13
795 983 3.401243 GAAATGGCGCCGAGGCTTG 62.401 63.158 23.90 0.00 46.88 4.01
817 1005 1.764054 CCCGCCTCTCCTCCATCTT 60.764 63.158 0.00 0.00 0.00 2.40
819 1007 1.361993 CGCCTCTCCTCCATCTTCG 59.638 63.158 0.00 0.00 0.00 3.79
856 1044 7.402071 TCGATCAACCCCCTAGCTATTAATATT 59.598 37.037 0.00 0.00 0.00 1.28
904 1092 2.736826 CCTTTCCTCCTCCCTCGCC 61.737 68.421 0.00 0.00 0.00 5.54
905 1093 2.687566 TTTCCTCCTCCCTCGCCC 60.688 66.667 0.00 0.00 0.00 6.13
906 1094 3.254035 TTTCCTCCTCCCTCGCCCT 62.254 63.158 0.00 0.00 0.00 5.19
907 1095 3.680920 TTCCTCCTCCCTCGCCCTC 62.681 68.421 0.00 0.00 0.00 4.30
928 1116 1.279271 GCTCCAGCAACCTTCTTCCTA 59.721 52.381 0.00 0.00 41.59 2.94
929 1117 2.679349 GCTCCAGCAACCTTCTTCCTAG 60.679 54.545 0.00 0.00 41.59 3.02
937 1125 3.342377 ACCTTCTTCCTAGCTTCTTGC 57.658 47.619 0.00 0.00 43.29 4.01
1041 1233 3.838795 GTGTGCATCGTCGGCGTC 61.839 66.667 10.18 0.00 39.49 5.19
1627 1844 2.341543 CCTCGCCTCCATGGATCG 59.658 66.667 23.11 23.11 38.35 3.69
1632 1849 1.079543 GCCTCCATGGATCGGATCG 60.080 63.158 21.47 6.11 38.35 3.69
1673 1898 4.031611 TGCATGGATTGGATTGGATTTCA 58.968 39.130 0.00 0.00 0.00 2.69
1697 1922 3.325870 GTCACCATCACTCATCGTTCAA 58.674 45.455 0.00 0.00 0.00 2.69
1768 2004 7.055667 ACCCCATTTTCTTTTTCTTCTCTTC 57.944 36.000 0.00 0.00 0.00 2.87
1769 2005 6.611236 ACCCCATTTTCTTTTTCTTCTCTTCA 59.389 34.615 0.00 0.00 0.00 3.02
1770 2006 6.925718 CCCCATTTTCTTTTTCTTCTCTTCAC 59.074 38.462 0.00 0.00 0.00 3.18
1771 2007 7.417797 CCCCATTTTCTTTTTCTTCTCTTCACA 60.418 37.037 0.00 0.00 0.00 3.58
1773 2009 9.189723 CCATTTTCTTTTTCTTCTCTTCACATC 57.810 33.333 0.00 0.00 0.00 3.06
1797 2039 4.438148 TCGATCGATTGTCCATAAAAGCA 58.562 39.130 15.15 0.00 0.00 3.91
1817 2059 8.986477 AAAGCAAATATTGTAGACCATGTTTC 57.014 30.769 0.00 0.00 0.00 2.78
1823 2068 9.466497 AAATATTGTAGACCATGTTTCACTCAT 57.534 29.630 0.00 0.00 0.00 2.90
1876 2121 4.521146 ACAAGATGGATTCACTCATCACC 58.479 43.478 0.00 0.00 41.45 4.02
1887 2134 4.887748 TCACTCATCACCTCTGTTTTCTC 58.112 43.478 0.00 0.00 0.00 2.87
1904 2155 8.142994 TGTTTTCTCTCTGTACAAAGATGAAC 57.857 34.615 0.00 6.06 0.00 3.18
1926 2185 7.598869 TGAACTTGTGTACTGTGTATCTCATTC 59.401 37.037 0.00 0.00 0.00 2.67
1929 2188 7.600375 ACTTGTGTACTGTGTATCTCATTCAAG 59.400 37.037 0.00 0.00 34.33 3.02
1930 2189 6.398095 TGTGTACTGTGTATCTCATTCAAGG 58.602 40.000 0.00 0.00 0.00 3.61
1931 2190 6.014584 TGTGTACTGTGTATCTCATTCAAGGT 60.015 38.462 0.00 0.00 0.00 3.50
1932 2191 6.874134 GTGTACTGTGTATCTCATTCAAGGTT 59.126 38.462 0.00 0.00 0.00 3.50
1933 2192 7.387948 GTGTACTGTGTATCTCATTCAAGGTTT 59.612 37.037 0.00 0.00 0.00 3.27
1934 2193 7.936847 TGTACTGTGTATCTCATTCAAGGTTTT 59.063 33.333 0.00 0.00 0.00 2.43
1935 2194 7.206981 ACTGTGTATCTCATTCAAGGTTTTG 57.793 36.000 0.00 0.00 35.57 2.44
1936 2195 6.207417 ACTGTGTATCTCATTCAAGGTTTTGG 59.793 38.462 0.00 0.00 34.97 3.28
1937 2196 6.068010 TGTGTATCTCATTCAAGGTTTTGGT 58.932 36.000 0.00 0.00 34.97 3.67
1938 2197 6.549364 TGTGTATCTCATTCAAGGTTTTGGTT 59.451 34.615 0.00 0.00 34.97 3.67
1939 2198 7.721842 TGTGTATCTCATTCAAGGTTTTGGTTA 59.278 33.333 0.00 0.00 34.97 2.85
1940 2199 8.021396 GTGTATCTCATTCAAGGTTTTGGTTAC 58.979 37.037 0.00 0.00 34.97 2.50
1941 2200 6.590234 ATCTCATTCAAGGTTTTGGTTACC 57.410 37.500 0.00 0.00 34.97 2.85
1942 2201 5.450453 TCTCATTCAAGGTTTTGGTTACCA 58.550 37.500 0.00 0.00 38.16 3.25
1943 2202 5.534654 TCTCATTCAAGGTTTTGGTTACCAG 59.465 40.000 3.65 0.00 38.16 4.00
1944 2203 5.205056 TCATTCAAGGTTTTGGTTACCAGT 58.795 37.500 3.65 0.00 38.16 4.00
1945 2204 5.300792 TCATTCAAGGTTTTGGTTACCAGTC 59.699 40.000 3.65 0.00 38.16 3.51
1946 2205 3.207778 TCAAGGTTTTGGTTACCAGTCG 58.792 45.455 3.65 0.00 38.16 4.18
1947 2206 3.118334 TCAAGGTTTTGGTTACCAGTCGA 60.118 43.478 3.65 0.00 38.16 4.20
1948 2207 3.564053 AGGTTTTGGTTACCAGTCGAA 57.436 42.857 3.65 0.00 38.16 3.71
1949 2208 3.888583 AGGTTTTGGTTACCAGTCGAAA 58.111 40.909 3.65 0.00 38.16 3.46
1950 2209 4.466827 AGGTTTTGGTTACCAGTCGAAAT 58.533 39.130 3.65 0.00 38.16 2.17
1951 2210 4.891168 AGGTTTTGGTTACCAGTCGAAATT 59.109 37.500 3.65 0.00 38.16 1.82
1952 2211 5.361571 AGGTTTTGGTTACCAGTCGAAATTT 59.638 36.000 3.65 0.00 38.16 1.82
1953 2212 5.688621 GGTTTTGGTTACCAGTCGAAATTTC 59.311 40.000 3.65 8.20 33.81 2.17
1954 2213 6.267070 GTTTTGGTTACCAGTCGAAATTTCA 58.733 36.000 17.99 2.95 33.81 2.69
1955 2214 6.452494 TTTGGTTACCAGTCGAAATTTCAA 57.548 33.333 17.99 0.00 33.81 2.69
1956 2215 5.682943 TGGTTACCAGTCGAAATTTCAAG 57.317 39.130 17.99 3.07 0.00 3.02
1957 2216 5.369833 TGGTTACCAGTCGAAATTTCAAGA 58.630 37.500 17.99 5.43 0.00 3.02
1958 2217 6.001460 TGGTTACCAGTCGAAATTTCAAGAT 58.999 36.000 17.99 1.22 0.00 2.40
1959 2218 6.488683 TGGTTACCAGTCGAAATTTCAAGATT 59.511 34.615 17.99 2.59 0.00 2.40
1960 2219 7.013846 TGGTTACCAGTCGAAATTTCAAGATTT 59.986 33.333 17.99 0.99 32.16 2.17
1961 2220 7.537649 GGTTACCAGTCGAAATTTCAAGATTTC 59.462 37.037 17.99 0.00 40.80 2.17
1962 2221 6.013842 ACCAGTCGAAATTTCAAGATTTCC 57.986 37.500 17.99 0.00 41.02 3.13
1963 2222 5.048013 ACCAGTCGAAATTTCAAGATTTCCC 60.048 40.000 17.99 0.00 41.02 3.97
1964 2223 5.048083 CCAGTCGAAATTTCAAGATTTCCCA 60.048 40.000 17.99 0.00 41.02 4.37
1965 2224 6.350445 CCAGTCGAAATTTCAAGATTTCCCAT 60.350 38.462 17.99 0.00 41.02 4.00
1966 2225 6.529125 CAGTCGAAATTTCAAGATTTCCCATG 59.471 38.462 17.99 0.00 41.02 3.66
1967 2226 6.434028 AGTCGAAATTTCAAGATTTCCCATGA 59.566 34.615 17.99 0.00 41.02 3.07
1968 2227 7.123247 AGTCGAAATTTCAAGATTTCCCATGAT 59.877 33.333 17.99 0.00 41.02 2.45
1969 2228 7.761249 GTCGAAATTTCAAGATTTCCCATGATT 59.239 33.333 17.99 0.00 41.02 2.57
1970 2229 8.965819 TCGAAATTTCAAGATTTCCCATGATTA 58.034 29.630 17.99 0.00 41.02 1.75
1971 2230 9.754382 CGAAATTTCAAGATTTCCCATGATTAT 57.246 29.630 17.99 0.00 41.02 1.28
1973 2232 9.754382 AAATTTCAAGATTTCCCATGATTATCG 57.246 29.630 0.00 0.00 0.00 2.92
1974 2233 7.880160 TTTCAAGATTTCCCATGATTATCGT 57.120 32.000 0.00 0.00 0.00 3.73
1975 2234 6.866010 TCAAGATTTCCCATGATTATCGTG 57.134 37.500 7.41 7.41 33.30 4.35
1976 2235 6.356556 TCAAGATTTCCCATGATTATCGTGT 58.643 36.000 12.72 0.00 31.62 4.49
1977 2236 7.505258 TCAAGATTTCCCATGATTATCGTGTA 58.495 34.615 12.72 0.00 31.62 2.90
1978 2237 8.156820 TCAAGATTTCCCATGATTATCGTGTAT 58.843 33.333 12.72 2.12 31.62 2.29
1979 2238 8.786898 CAAGATTTCCCATGATTATCGTGTATT 58.213 33.333 12.72 0.00 31.62 1.89
1980 2239 8.924511 AGATTTCCCATGATTATCGTGTATTT 57.075 30.769 12.72 0.00 31.62 1.40
1981 2240 9.003658 AGATTTCCCATGATTATCGTGTATTTC 57.996 33.333 12.72 4.32 31.62 2.17
1982 2241 7.504924 TTTCCCATGATTATCGTGTATTTCC 57.495 36.000 12.72 0.00 31.62 3.13
1983 2242 5.234752 TCCCATGATTATCGTGTATTTCCG 58.765 41.667 12.72 0.00 31.62 4.30
1984 2243 4.994852 CCCATGATTATCGTGTATTTCCGT 59.005 41.667 12.72 0.00 31.62 4.69
1985 2244 5.107104 CCCATGATTATCGTGTATTTCCGTG 60.107 44.000 12.72 0.00 31.62 4.94
1986 2245 5.374080 CATGATTATCGTGTATTTCCGTGC 58.626 41.667 6.27 0.00 0.00 5.34
1987 2246 3.805422 TGATTATCGTGTATTTCCGTGCC 59.195 43.478 0.00 0.00 0.00 5.01
1988 2247 2.228138 TATCGTGTATTTCCGTGCCC 57.772 50.000 0.00 0.00 0.00 5.36
1989 2248 0.463116 ATCGTGTATTTCCGTGCCCC 60.463 55.000 0.00 0.00 0.00 5.80
1990 2249 1.078708 CGTGTATTTCCGTGCCCCT 60.079 57.895 0.00 0.00 0.00 4.79
1991 2250 1.087771 CGTGTATTTCCGTGCCCCTC 61.088 60.000 0.00 0.00 0.00 4.30
1992 2251 1.087771 GTGTATTTCCGTGCCCCTCG 61.088 60.000 0.00 0.00 0.00 4.63
1993 2252 1.259142 TGTATTTCCGTGCCCCTCGA 61.259 55.000 0.00 0.00 0.00 4.04
1994 2253 0.106149 GTATTTCCGTGCCCCTCGAT 59.894 55.000 0.00 0.00 0.00 3.59
1995 2254 0.834612 TATTTCCGTGCCCCTCGATT 59.165 50.000 0.00 0.00 0.00 3.34
1996 2255 0.834612 ATTTCCGTGCCCCTCGATTA 59.165 50.000 0.00 0.00 0.00 1.75
1997 2256 0.614294 TTTCCGTGCCCCTCGATTAA 59.386 50.000 0.00 0.00 0.00 1.40
1998 2257 0.834612 TTCCGTGCCCCTCGATTAAT 59.165 50.000 0.00 0.00 0.00 1.40
1999 2258 0.391597 TCCGTGCCCCTCGATTAATC 59.608 55.000 5.30 5.30 0.00 1.75
2011 2270 1.654105 CGATTAATCGCCATACCGAGC 59.346 52.381 23.67 0.00 43.84 5.03
2012 2271 2.683968 GATTAATCGCCATACCGAGCA 58.316 47.619 0.00 0.00 40.97 4.26
2013 2272 2.605837 TTAATCGCCATACCGAGCAA 57.394 45.000 0.00 0.00 40.97 3.91
2014 2273 2.605837 TAATCGCCATACCGAGCAAA 57.394 45.000 0.00 0.00 40.97 3.68
2015 2274 1.745232 AATCGCCATACCGAGCAAAA 58.255 45.000 0.00 0.00 40.97 2.44
2016 2275 1.745232 ATCGCCATACCGAGCAAAAA 58.255 45.000 0.00 0.00 40.97 1.94
2070 2329 9.485206 AAACACTCGATTTACAGTAAAGTATGT 57.515 29.630 11.41 8.14 0.00 2.29
2072 2331 9.784680 ACACTCGATTTACAGTAAAGTATGTAG 57.215 33.333 11.41 5.77 0.00 2.74
2073 2332 9.234384 CACTCGATTTACAGTAAAGTATGTAGG 57.766 37.037 11.41 0.42 0.00 3.18
2074 2333 9.182214 ACTCGATTTACAGTAAAGTATGTAGGA 57.818 33.333 11.41 0.44 0.00 2.94
2105 2364 4.981806 TGCAATAAGAGTTGGTTATGGC 57.018 40.909 0.00 0.00 37.34 4.40
2106 2365 4.339748 TGCAATAAGAGTTGGTTATGGCA 58.660 39.130 1.54 1.54 42.19 4.92
2107 2366 4.955450 TGCAATAAGAGTTGGTTATGGCAT 59.045 37.500 4.88 4.88 40.42 4.40
2108 2367 5.163530 TGCAATAAGAGTTGGTTATGGCATG 60.164 40.000 10.98 0.00 40.42 4.06
2109 2368 5.163519 GCAATAAGAGTTGGTTATGGCATGT 60.164 40.000 10.98 0.00 36.96 3.21
2110 2369 6.627953 GCAATAAGAGTTGGTTATGGCATGTT 60.628 38.462 10.98 0.00 36.96 2.71
2111 2370 4.789012 AAGAGTTGGTTATGGCATGTTG 57.211 40.909 10.98 0.00 0.00 3.33
2112 2371 3.091545 AGAGTTGGTTATGGCATGTTGG 58.908 45.455 10.98 0.00 0.00 3.77
2113 2372 2.825532 GAGTTGGTTATGGCATGTTGGT 59.174 45.455 10.98 0.00 0.00 3.67
2114 2373 4.013728 GAGTTGGTTATGGCATGTTGGTA 58.986 43.478 10.98 0.00 0.00 3.25
2115 2374 4.016444 AGTTGGTTATGGCATGTTGGTAG 58.984 43.478 10.98 0.00 0.00 3.18
2116 2375 2.374184 TGGTTATGGCATGTTGGTAGC 58.626 47.619 10.98 0.00 0.00 3.58
2117 2376 2.291217 TGGTTATGGCATGTTGGTAGCA 60.291 45.455 10.98 0.00 0.00 3.49
2118 2377 2.757868 GGTTATGGCATGTTGGTAGCAA 59.242 45.455 10.98 2.54 0.00 3.91
2119 2378 3.428862 GGTTATGGCATGTTGGTAGCAAC 60.429 47.826 26.90 26.90 35.75 4.17
2120 2379 1.185315 ATGGCATGTTGGTAGCAACC 58.815 50.000 29.46 17.64 46.98 3.77
2121 2380 0.112218 TGGCATGTTGGTAGCAACCT 59.888 50.000 29.46 20.04 46.91 3.50
2122 2381 1.352687 TGGCATGTTGGTAGCAACCTA 59.647 47.619 29.46 16.07 46.91 3.08
2123 2382 2.017049 GGCATGTTGGTAGCAACCTAG 58.983 52.381 29.46 20.86 46.91 3.02
2124 2383 2.618045 GGCATGTTGGTAGCAACCTAGT 60.618 50.000 29.46 13.78 46.91 2.57
2125 2384 3.081804 GCATGTTGGTAGCAACCTAGTT 58.918 45.455 29.46 10.75 46.91 2.24
2126 2385 3.506067 GCATGTTGGTAGCAACCTAGTTT 59.494 43.478 29.46 9.24 46.91 2.66
2127 2386 4.379499 GCATGTTGGTAGCAACCTAGTTTC 60.379 45.833 29.46 11.68 46.91 2.78
2128 2387 4.699925 TGTTGGTAGCAACCTAGTTTCT 57.300 40.909 29.46 0.00 46.91 2.52
2129 2388 4.385825 TGTTGGTAGCAACCTAGTTTCTG 58.614 43.478 29.46 0.00 46.91 3.02
2130 2389 4.141574 TGTTGGTAGCAACCTAGTTTCTGT 60.142 41.667 29.46 0.00 46.91 3.41
2131 2390 4.699925 TGGTAGCAACCTAGTTTCTGTT 57.300 40.909 0.00 0.00 46.91 3.16
2132 2391 5.043737 TGGTAGCAACCTAGTTTCTGTTT 57.956 39.130 0.00 0.00 46.91 2.83
2133 2392 5.442391 TGGTAGCAACCTAGTTTCTGTTTT 58.558 37.500 0.00 0.00 46.91 2.43
2134 2393 5.298276 TGGTAGCAACCTAGTTTCTGTTTTG 59.702 40.000 0.00 0.00 46.91 2.44
2135 2394 5.529800 GGTAGCAACCTAGTTTCTGTTTTGA 59.470 40.000 0.00 0.00 43.08 2.69
2136 2395 5.757850 AGCAACCTAGTTTCTGTTTTGAG 57.242 39.130 0.00 0.00 0.00 3.02
2137 2396 5.437060 AGCAACCTAGTTTCTGTTTTGAGA 58.563 37.500 0.00 0.00 0.00 3.27
2138 2397 5.529060 AGCAACCTAGTTTCTGTTTTGAGAG 59.471 40.000 0.00 0.00 0.00 3.20
2139 2398 5.278022 GCAACCTAGTTTCTGTTTTGAGAGG 60.278 44.000 0.00 0.00 0.00 3.69
2140 2399 5.632034 ACCTAGTTTCTGTTTTGAGAGGT 57.368 39.130 0.00 0.00 0.00 3.85
2141 2400 5.612351 ACCTAGTTTCTGTTTTGAGAGGTC 58.388 41.667 0.00 0.00 0.00 3.85
2142 2401 5.367060 ACCTAGTTTCTGTTTTGAGAGGTCT 59.633 40.000 0.00 0.00 0.00 3.85
2143 2402 5.929415 CCTAGTTTCTGTTTTGAGAGGTCTC 59.071 44.000 0.00 0.00 43.15 3.36
2144 2403 5.622346 AGTTTCTGTTTTGAGAGGTCTCT 57.378 39.130 8.44 0.00 43.25 3.10
2145 2404 5.363939 AGTTTCTGTTTTGAGAGGTCTCTG 58.636 41.667 5.09 0.00 43.25 3.35
2146 2405 5.104735 AGTTTCTGTTTTGAGAGGTCTCTGT 60.105 40.000 5.09 0.00 43.25 3.41
2147 2406 5.359194 TTCTGTTTTGAGAGGTCTCTGTT 57.641 39.130 5.09 0.00 43.25 3.16
2148 2407 5.359194 TCTGTTTTGAGAGGTCTCTGTTT 57.641 39.130 5.09 0.00 43.25 2.83
2149 2408 5.745227 TCTGTTTTGAGAGGTCTCTGTTTT 58.255 37.500 5.09 0.00 43.25 2.43
2150 2409 5.586243 TCTGTTTTGAGAGGTCTCTGTTTTG 59.414 40.000 5.09 0.00 43.25 2.44
2151 2410 5.496556 TGTTTTGAGAGGTCTCTGTTTTGA 58.503 37.500 5.09 0.00 43.25 2.69
2152 2411 5.943416 TGTTTTGAGAGGTCTCTGTTTTGAA 59.057 36.000 5.09 0.00 43.25 2.69
2153 2412 6.603201 TGTTTTGAGAGGTCTCTGTTTTGAAT 59.397 34.615 5.09 0.00 43.25 2.57
2154 2413 7.773224 TGTTTTGAGAGGTCTCTGTTTTGAATA 59.227 33.333 5.09 0.00 43.25 1.75
2155 2414 8.787852 GTTTTGAGAGGTCTCTGTTTTGAATAT 58.212 33.333 5.09 0.00 43.25 1.28
2156 2415 8.924511 TTTGAGAGGTCTCTGTTTTGAATATT 57.075 30.769 5.09 0.00 43.25 1.28
2157 2416 8.553459 TTGAGAGGTCTCTGTTTTGAATATTC 57.447 34.615 8.60 8.60 43.25 1.75
2158 2417 6.813649 TGAGAGGTCTCTGTTTTGAATATTCG 59.186 38.462 10.80 0.00 43.25 3.34
2159 2418 6.702329 AGAGGTCTCTGTTTTGAATATTCGT 58.298 36.000 10.80 0.00 38.75 3.85
2160 2419 7.162082 AGAGGTCTCTGTTTTGAATATTCGTT 58.838 34.615 10.80 0.00 38.75 3.85
2161 2420 7.332182 AGAGGTCTCTGTTTTGAATATTCGTTC 59.668 37.037 10.80 2.65 38.75 3.95
2162 2421 6.934645 AGGTCTCTGTTTTGAATATTCGTTCA 59.065 34.615 10.80 6.61 36.38 3.18
2163 2422 7.607991 AGGTCTCTGTTTTGAATATTCGTTCAT 59.392 33.333 10.80 0.00 37.88 2.57
2164 2423 8.237267 GGTCTCTGTTTTGAATATTCGTTCATT 58.763 33.333 10.80 0.00 37.88 2.57
2165 2424 9.267096 GTCTCTGTTTTGAATATTCGTTCATTC 57.733 33.333 10.80 0.00 37.88 2.67
2166 2425 8.998377 TCTCTGTTTTGAATATTCGTTCATTCA 58.002 29.630 10.80 4.85 38.93 2.57
2167 2426 8.948853 TCTGTTTTGAATATTCGTTCATTCAC 57.051 30.769 10.80 0.56 40.06 3.18
2168 2427 8.783093 TCTGTTTTGAATATTCGTTCATTCACT 58.217 29.630 10.80 0.00 40.06 3.41
2169 2428 9.398170 CTGTTTTGAATATTCGTTCATTCACTT 57.602 29.630 10.80 0.00 40.06 3.16
2181 2440 9.958234 TTCGTTCATTCACTTATTTGAATTCAA 57.042 25.926 16.91 16.91 42.45 2.69
2217 2476 6.436843 AAATTTGCTCGAAATATTCTCGGT 57.563 33.333 15.30 0.00 36.93 4.69
2218 2477 7.548196 AAATTTGCTCGAAATATTCTCGGTA 57.452 32.000 15.30 7.27 36.93 4.02
2219 2478 7.730364 AATTTGCTCGAAATATTCTCGGTAT 57.270 32.000 15.30 4.98 36.93 2.73
2220 2479 7.730364 ATTTGCTCGAAATATTCTCGGTATT 57.270 32.000 15.30 0.00 36.93 1.89
2221 2480 7.548196 TTTGCTCGAAATATTCTCGGTATTT 57.452 32.000 15.30 0.00 36.93 1.40
2222 2481 6.525121 TGCTCGAAATATTCTCGGTATTTG 57.475 37.500 15.30 5.66 36.93 2.32
2223 2482 6.046593 TGCTCGAAATATTCTCGGTATTTGT 58.953 36.000 15.30 0.00 36.93 2.83
2224 2483 6.200286 TGCTCGAAATATTCTCGGTATTTGTC 59.800 38.462 15.30 0.00 36.93 3.18
2225 2484 6.613745 GCTCGAAATATTCTCGGTATTTGTCG 60.614 42.308 15.30 6.03 36.93 4.35
2226 2485 5.688621 TCGAAATATTCTCGGTATTTGTCGG 59.311 40.000 15.30 0.00 36.93 4.79
2227 2486 5.461078 CGAAATATTCTCGGTATTTGTCGGT 59.539 40.000 10.37 0.00 33.23 4.69
2228 2487 6.638063 CGAAATATTCTCGGTATTTGTCGGTA 59.362 38.462 10.37 0.00 33.23 4.02
2229 2488 7.327761 CGAAATATTCTCGGTATTTGTCGGTAT 59.672 37.037 10.37 0.00 33.23 2.73
2230 2489 8.897872 AAATATTCTCGGTATTTGTCGGTATT 57.102 30.769 0.00 0.00 32.19 1.89
2231 2490 8.897872 AATATTCTCGGTATTTGTCGGTATTT 57.102 30.769 0.00 0.00 0.00 1.40
2232 2491 6.839820 ATTCTCGGTATTTGTCGGTATTTC 57.160 37.500 0.00 0.00 0.00 2.17
2233 2492 5.587388 TCTCGGTATTTGTCGGTATTTCT 57.413 39.130 0.00 0.00 0.00 2.52
2234 2493 5.585390 TCTCGGTATTTGTCGGTATTTCTC 58.415 41.667 0.00 0.00 0.00 2.87
2235 2494 4.353737 TCGGTATTTGTCGGTATTTCTCG 58.646 43.478 0.00 0.00 0.00 4.04
2236 2495 4.096231 TCGGTATTTGTCGGTATTTCTCGA 59.904 41.667 0.00 0.00 0.00 4.04
2237 2496 4.980434 CGGTATTTGTCGGTATTTCTCGAT 59.020 41.667 0.00 0.00 37.73 3.59
2238 2497 6.017192 TCGGTATTTGTCGGTATTTCTCGATA 60.017 38.462 0.00 0.00 37.73 2.92
2239 2498 6.638063 CGGTATTTGTCGGTATTTCTCGATAA 59.362 38.462 0.00 0.00 37.73 1.75
2240 2499 7.357859 CGGTATTTGTCGGTATTTCTCGATAAC 60.358 40.741 0.00 0.00 36.53 1.89
2241 2500 6.839820 ATTTGTCGGTATTTCTCGATAACC 57.160 37.500 0.00 0.00 36.53 2.85
2242 2501 3.956233 TGTCGGTATTTCTCGATAACCG 58.044 45.455 14.36 14.36 37.73 4.44
2243 2502 3.378112 TGTCGGTATTTCTCGATAACCGT 59.622 43.478 17.80 0.00 39.87 4.83
2244 2503 3.727723 GTCGGTATTTCTCGATAACCGTG 59.272 47.826 17.80 0.00 39.87 4.94
2245 2504 3.047796 CGGTATTTCTCGATAACCGTGG 58.952 50.000 13.02 0.00 39.75 4.94
2246 2505 3.489738 CGGTATTTCTCGATAACCGTGGT 60.490 47.826 13.02 0.00 39.75 4.16
2247 2506 4.261155 CGGTATTTCTCGATAACCGTGGTA 60.261 45.833 13.02 0.00 39.75 3.25
2248 2507 5.591099 GGTATTTCTCGATAACCGTGGTAA 58.409 41.667 0.00 0.00 39.75 2.85
2249 2508 5.460091 GGTATTTCTCGATAACCGTGGTAAC 59.540 44.000 0.00 0.00 39.75 2.50
2250 2509 3.508744 TTCTCGATAACCGTGGTAACC 57.491 47.619 0.00 0.00 39.75 2.85
2251 2510 2.445427 TCTCGATAACCGTGGTAACCA 58.555 47.619 0.00 0.00 39.75 3.67
2265 2524 4.850680 TGGTAACCACATTTATCAGTCCC 58.149 43.478 0.00 0.00 0.00 4.46
2266 2525 4.204799 GGTAACCACATTTATCAGTCCCC 58.795 47.826 0.00 0.00 0.00 4.81
2267 2526 3.382083 AACCACATTTATCAGTCCCCC 57.618 47.619 0.00 0.00 0.00 5.40
2268 2527 2.573463 ACCACATTTATCAGTCCCCCT 58.427 47.619 0.00 0.00 0.00 4.79
2269 2528 2.509964 ACCACATTTATCAGTCCCCCTC 59.490 50.000 0.00 0.00 0.00 4.30
2270 2529 2.509548 CCACATTTATCAGTCCCCCTCA 59.490 50.000 0.00 0.00 0.00 3.86
2271 2530 3.434167 CCACATTTATCAGTCCCCCTCAG 60.434 52.174 0.00 0.00 0.00 3.35
2272 2531 3.200825 CACATTTATCAGTCCCCCTCAGT 59.799 47.826 0.00 0.00 0.00 3.41
2273 2532 3.852578 ACATTTATCAGTCCCCCTCAGTT 59.147 43.478 0.00 0.00 0.00 3.16
2274 2533 5.036916 ACATTTATCAGTCCCCCTCAGTTA 58.963 41.667 0.00 0.00 0.00 2.24
2275 2534 5.491078 ACATTTATCAGTCCCCCTCAGTTAA 59.509 40.000 0.00 0.00 0.00 2.01
2276 2535 6.011981 ACATTTATCAGTCCCCCTCAGTTAAA 60.012 38.462 0.00 0.00 0.00 1.52
2277 2536 6.652205 TTTATCAGTCCCCCTCAGTTAAAT 57.348 37.500 0.00 0.00 0.00 1.40
2278 2537 6.652205 TTATCAGTCCCCCTCAGTTAAATT 57.348 37.500 0.00 0.00 0.00 1.82
2279 2538 7.758820 TTATCAGTCCCCCTCAGTTAAATTA 57.241 36.000 0.00 0.00 0.00 1.40
2280 2539 5.431179 TCAGTCCCCCTCAGTTAAATTAC 57.569 43.478 0.00 0.00 0.00 1.89
2281 2540 4.226620 TCAGTCCCCCTCAGTTAAATTACC 59.773 45.833 0.00 0.00 0.00 2.85
2282 2541 4.227527 CAGTCCCCCTCAGTTAAATTACCT 59.772 45.833 0.00 0.00 0.00 3.08
2283 2542 4.473922 AGTCCCCCTCAGTTAAATTACCTC 59.526 45.833 0.00 0.00 0.00 3.85
2284 2543 4.226620 GTCCCCCTCAGTTAAATTACCTCA 59.773 45.833 0.00 0.00 0.00 3.86
2285 2544 5.043762 TCCCCCTCAGTTAAATTACCTCAT 58.956 41.667 0.00 0.00 0.00 2.90
2286 2545 5.494706 TCCCCCTCAGTTAAATTACCTCATT 59.505 40.000 0.00 0.00 0.00 2.57
2287 2546 5.828328 CCCCCTCAGTTAAATTACCTCATTC 59.172 44.000 0.00 0.00 0.00 2.67
2288 2547 5.527582 CCCCTCAGTTAAATTACCTCATTCG 59.472 44.000 0.00 0.00 0.00 3.34
2289 2548 5.527582 CCCTCAGTTAAATTACCTCATTCGG 59.472 44.000 0.00 0.00 0.00 4.30
2290 2549 6.113411 CCTCAGTTAAATTACCTCATTCGGT 58.887 40.000 0.00 0.00 41.10 4.69
2291 2550 7.270047 CCTCAGTTAAATTACCTCATTCGGTA 58.730 38.462 0.00 0.00 38.49 4.02
2299 2558 5.945466 TTACCTCATTCGGTAACCAAAAC 57.055 39.130 0.00 0.00 42.88 2.43
2300 2559 3.151554 ACCTCATTCGGTAACCAAAACC 58.848 45.455 0.00 0.00 34.94 3.27
2301 2560 3.181437 ACCTCATTCGGTAACCAAAACCT 60.181 43.478 0.00 0.00 34.94 3.50
2302 2561 3.824443 CCTCATTCGGTAACCAAAACCTT 59.176 43.478 0.00 0.00 34.66 3.50
2303 2562 4.320935 CCTCATTCGGTAACCAAAACCTTG 60.321 45.833 0.00 0.00 34.66 3.61
2304 2563 4.462133 TCATTCGGTAACCAAAACCTTGA 58.538 39.130 0.00 0.00 34.14 3.02
2305 2564 5.074115 TCATTCGGTAACCAAAACCTTGAT 58.926 37.500 0.00 0.00 34.14 2.57
2306 2565 5.182380 TCATTCGGTAACCAAAACCTTGATC 59.818 40.000 0.00 0.00 34.14 2.92
2307 2566 4.360951 TCGGTAACCAAAACCTTGATCT 57.639 40.909 0.00 0.00 34.14 2.75
2308 2567 4.320870 TCGGTAACCAAAACCTTGATCTC 58.679 43.478 0.00 0.00 34.14 2.75
2309 2568 4.069304 CGGTAACCAAAACCTTGATCTCA 58.931 43.478 0.00 0.00 34.14 3.27
2310 2569 4.700213 CGGTAACCAAAACCTTGATCTCAT 59.300 41.667 0.00 0.00 34.14 2.90
2311 2570 5.183140 CGGTAACCAAAACCTTGATCTCATT 59.817 40.000 0.00 0.00 34.14 2.57
2312 2571 6.621613 GGTAACCAAAACCTTGATCTCATTC 58.378 40.000 0.00 0.00 34.14 2.67
2313 2572 6.208599 GGTAACCAAAACCTTGATCTCATTCA 59.791 38.462 0.00 0.00 34.14 2.57
2314 2573 5.972107 ACCAAAACCTTGATCTCATTCAG 57.028 39.130 0.00 0.00 34.14 3.02
2315 2574 5.388654 ACCAAAACCTTGATCTCATTCAGT 58.611 37.500 0.00 0.00 34.14 3.41
2316 2575 5.242393 ACCAAAACCTTGATCTCATTCAGTG 59.758 40.000 0.00 0.00 34.14 3.66
2320 2579 2.507058 CCTTGATCTCATTCAGTGGGGA 59.493 50.000 0.00 0.00 0.00 4.81
2373 2632 3.253371 GTGAAACCAGAATGTGTGTCG 57.747 47.619 0.00 0.00 29.45 4.35
2375 2634 0.951558 AAACCAGAATGTGTGTCGGC 59.048 50.000 0.00 0.00 0.00 5.54
2377 2636 2.476051 CAGAATGTGTGTCGGCGC 59.524 61.111 0.00 0.00 0.00 6.53
2390 2659 2.278989 GGCGCGCAGACCGTTATA 60.279 61.111 34.42 0.00 39.71 0.98
2392 2661 2.913265 GCGCGCAGACCGTTATACG 61.913 63.158 29.10 0.00 42.11 3.06
2417 2686 4.000988 TCGTACTTCTTTGCAGGGAAATC 58.999 43.478 5.25 0.10 0.00 2.17
2419 2688 4.455877 CGTACTTCTTTGCAGGGAAATCTT 59.544 41.667 5.25 0.00 0.00 2.40
2421 2690 4.473444 ACTTCTTTGCAGGGAAATCTTCA 58.527 39.130 5.25 0.00 0.00 3.02
2428 2698 5.333299 TGCAGGGAAATCTTCAATGATTG 57.667 39.130 0.00 0.00 36.84 2.67
2466 2736 5.422214 TCCTGACCTCTAGAAACAAATCC 57.578 43.478 0.00 0.00 0.00 3.01
2467 2737 5.094387 TCCTGACCTCTAGAAACAAATCCT 58.906 41.667 0.00 0.00 0.00 3.24
2468 2738 5.046304 TCCTGACCTCTAGAAACAAATCCTG 60.046 44.000 0.00 0.00 0.00 3.86
2469 2739 5.046304 CCTGACCTCTAGAAACAAATCCTGA 60.046 44.000 0.00 0.00 0.00 3.86
2471 2741 5.306937 TGACCTCTAGAAACAAATCCTGACA 59.693 40.000 0.00 0.00 0.00 3.58
2472 2742 6.183361 TGACCTCTAGAAACAAATCCTGACAA 60.183 38.462 0.00 0.00 0.00 3.18
2493 2774 5.950549 ACAAAGAGATTCAGATGATTTGCCT 59.049 36.000 5.99 0.00 31.12 4.75
2496 2777 4.888239 AGAGATTCAGATGATTTGCCTTGG 59.112 41.667 0.00 0.00 0.00 3.61
2501 2782 5.128033 TCAGATGATTTGCCTTGGGAATA 57.872 39.130 0.00 0.00 0.00 1.75
2542 2823 3.705072 AGTAGCATAACGGACTAGCCTTT 59.295 43.478 0.00 0.00 32.18 3.11
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 2.442272 ATGACGAGGAGGTCCCCG 60.442 66.667 0.00 0.00 36.07 5.73
3 4 2.134933 GGATGACGAGGAGGTCCCC 61.135 68.421 0.00 0.00 36.07 4.81
4 5 2.134933 GGGATGACGAGGAGGTCCC 61.135 68.421 0.00 0.00 41.55 4.46
5 6 0.185416 TAGGGATGACGAGGAGGTCC 59.815 60.000 0.00 0.00 36.07 4.46
6 7 1.611519 CTAGGGATGACGAGGAGGTC 58.388 60.000 0.00 0.00 37.45 3.85
7 8 0.468400 GCTAGGGATGACGAGGAGGT 60.468 60.000 0.00 0.00 0.00 3.85
8 9 1.182385 GGCTAGGGATGACGAGGAGG 61.182 65.000 0.00 0.00 0.00 4.30
9 10 1.182385 GGGCTAGGGATGACGAGGAG 61.182 65.000 0.00 0.00 0.00 3.69
10 11 1.152525 GGGCTAGGGATGACGAGGA 60.153 63.158 0.00 0.00 0.00 3.71
11 12 2.565645 CGGGCTAGGGATGACGAGG 61.566 68.421 0.00 0.00 0.00 4.63
12 13 2.565645 CCGGGCTAGGGATGACGAG 61.566 68.421 0.00 0.00 0.00 4.18
13 14 2.520982 CCGGGCTAGGGATGACGA 60.521 66.667 0.00 0.00 0.00 4.20
14 15 4.301027 GCCGGGCTAGGGATGACG 62.301 72.222 12.87 0.00 0.00 4.35
15 16 4.301027 CGCCGGGCTAGGGATGAC 62.301 72.222 18.34 0.00 0.00 3.06
16 17 4.853142 ACGCCGGGCTAGGGATGA 62.853 66.667 18.34 0.00 0.00 2.92
17 18 4.301027 GACGCCGGGCTAGGGATG 62.301 72.222 18.34 1.54 0.00 3.51
29 30 4.593864 GATGGGAGGAGCGACGCC 62.594 72.222 17.79 8.03 0.00 5.68
30 31 4.933064 CGATGGGAGGAGCGACGC 62.933 72.222 13.03 13.03 0.00 5.19
31 32 2.938539 GAACGATGGGAGGAGCGACG 62.939 65.000 0.00 0.00 0.00 5.12
32 33 1.227002 GAACGATGGGAGGAGCGAC 60.227 63.158 0.00 0.00 0.00 5.19
33 34 2.423898 GGAACGATGGGAGGAGCGA 61.424 63.158 0.00 0.00 0.00 4.93
34 35 2.107141 GGAACGATGGGAGGAGCG 59.893 66.667 0.00 0.00 0.00 5.03
35 36 0.035439 TTTGGAACGATGGGAGGAGC 60.035 55.000 0.00 0.00 0.00 4.70
36 37 1.679032 GGTTTGGAACGATGGGAGGAG 60.679 57.143 0.00 0.00 0.00 3.69
37 38 0.326927 GGTTTGGAACGATGGGAGGA 59.673 55.000 0.00 0.00 0.00 3.71
38 39 0.037590 TGGTTTGGAACGATGGGAGG 59.962 55.000 0.00 0.00 0.00 4.30
39 40 1.453155 CTGGTTTGGAACGATGGGAG 58.547 55.000 0.00 0.00 0.00 4.30
40 41 0.037590 CCTGGTTTGGAACGATGGGA 59.962 55.000 0.00 0.00 0.00 4.37
41 42 0.037590 TCCTGGTTTGGAACGATGGG 59.962 55.000 0.00 0.00 32.39 4.00
42 43 1.453155 CTCCTGGTTTGGAACGATGG 58.547 55.000 0.00 0.00 35.43 3.51
43 44 0.804989 GCTCCTGGTTTGGAACGATG 59.195 55.000 0.00 0.00 35.43 3.84
44 45 0.400213 TGCTCCTGGTTTGGAACGAT 59.600 50.000 0.00 0.00 35.43 3.73
45 46 0.181587 TTGCTCCTGGTTTGGAACGA 59.818 50.000 0.00 0.00 35.43 3.85
46 47 1.001378 CTTTGCTCCTGGTTTGGAACG 60.001 52.381 0.00 0.00 35.43 3.95
47 48 2.031870 ACTTTGCTCCTGGTTTGGAAC 58.968 47.619 0.00 0.00 35.43 3.62
48 49 2.430332 CAACTTTGCTCCTGGTTTGGAA 59.570 45.455 0.00 0.00 35.43 3.53
49 50 2.031120 CAACTTTGCTCCTGGTTTGGA 58.969 47.619 0.00 0.00 34.52 3.53
50 51 1.069049 CCAACTTTGCTCCTGGTTTGG 59.931 52.381 0.00 0.00 0.00 3.28
51 52 2.031120 TCCAACTTTGCTCCTGGTTTG 58.969 47.619 0.00 0.00 0.00 2.93
52 53 2.430694 GTTCCAACTTTGCTCCTGGTTT 59.569 45.455 0.00 0.00 0.00 3.27
53 54 2.031870 GTTCCAACTTTGCTCCTGGTT 58.968 47.619 0.00 0.00 0.00 3.67
54 55 1.064017 TGTTCCAACTTTGCTCCTGGT 60.064 47.619 0.00 0.00 0.00 4.00
55 56 1.691196 TGTTCCAACTTTGCTCCTGG 58.309 50.000 0.00 0.00 0.00 4.45
56 57 3.131046 AGTTTGTTCCAACTTTGCTCCTG 59.869 43.478 0.00 0.00 0.00 3.86
57 58 3.365472 AGTTTGTTCCAACTTTGCTCCT 58.635 40.909 0.00 0.00 0.00 3.69
58 59 3.706698 GAGTTTGTTCCAACTTTGCTCC 58.293 45.455 0.00 0.00 0.00 4.70
59 60 3.363178 CGAGTTTGTTCCAACTTTGCTC 58.637 45.455 0.00 0.00 0.00 4.26
60 61 2.099098 CCGAGTTTGTTCCAACTTTGCT 59.901 45.455 0.00 0.00 0.00 3.91
61 62 2.098443 TCCGAGTTTGTTCCAACTTTGC 59.902 45.455 0.00 0.00 0.00 3.68
62 63 3.243068 CCTCCGAGTTTGTTCCAACTTTG 60.243 47.826 0.00 0.00 0.00 2.77
63 64 2.949644 CCTCCGAGTTTGTTCCAACTTT 59.050 45.455 0.00 0.00 0.00 2.66
64 65 2.171870 TCCTCCGAGTTTGTTCCAACTT 59.828 45.455 0.00 0.00 0.00 2.66
65 66 1.766496 TCCTCCGAGTTTGTTCCAACT 59.234 47.619 0.00 0.00 0.00 3.16
66 67 1.871676 GTCCTCCGAGTTTGTTCCAAC 59.128 52.381 0.00 0.00 0.00 3.77
67 68 1.487142 TGTCCTCCGAGTTTGTTCCAA 59.513 47.619 0.00 0.00 0.00 3.53
68 69 1.124780 TGTCCTCCGAGTTTGTTCCA 58.875 50.000 0.00 0.00 0.00 3.53
69 70 1.202604 TGTGTCCTCCGAGTTTGTTCC 60.203 52.381 0.00 0.00 0.00 3.62
70 71 2.234300 TGTGTCCTCCGAGTTTGTTC 57.766 50.000 0.00 0.00 0.00 3.18
71 72 2.930826 ATGTGTCCTCCGAGTTTGTT 57.069 45.000 0.00 0.00 0.00 2.83
72 73 2.631062 TGTATGTGTCCTCCGAGTTTGT 59.369 45.455 0.00 0.00 0.00 2.83
73 74 2.993899 GTGTATGTGTCCTCCGAGTTTG 59.006 50.000 0.00 0.00 0.00 2.93
74 75 2.631062 TGTGTATGTGTCCTCCGAGTTT 59.369 45.455 0.00 0.00 0.00 2.66
75 76 2.231478 CTGTGTATGTGTCCTCCGAGTT 59.769 50.000 0.00 0.00 0.00 3.01
76 77 1.819288 CTGTGTATGTGTCCTCCGAGT 59.181 52.381 0.00 0.00 0.00 4.18
77 78 2.092323 TCTGTGTATGTGTCCTCCGAG 58.908 52.381 0.00 0.00 0.00 4.63
78 79 2.092323 CTCTGTGTATGTGTCCTCCGA 58.908 52.381 0.00 0.00 0.00 4.55
79 80 2.092323 TCTCTGTGTATGTGTCCTCCG 58.908 52.381 0.00 0.00 0.00 4.63
80 81 4.537135 TTTCTCTGTGTATGTGTCCTCC 57.463 45.455 0.00 0.00 0.00 4.30
81 82 5.992217 ACTTTTTCTCTGTGTATGTGTCCTC 59.008 40.000 0.00 0.00 0.00 3.71
82 83 5.930135 ACTTTTTCTCTGTGTATGTGTCCT 58.070 37.500 0.00 0.00 0.00 3.85
83 84 6.260050 TGAACTTTTTCTCTGTGTATGTGTCC 59.740 38.462 0.00 0.00 32.36 4.02
84 85 7.246674 TGAACTTTTTCTCTGTGTATGTGTC 57.753 36.000 0.00 0.00 32.36 3.67
85 86 7.624360 TTGAACTTTTTCTCTGTGTATGTGT 57.376 32.000 0.00 0.00 32.36 3.72
86 87 8.131100 ACATTGAACTTTTTCTCTGTGTATGTG 58.869 33.333 0.00 0.00 30.55 3.21
87 88 8.225603 ACATTGAACTTTTTCTCTGTGTATGT 57.774 30.769 0.00 0.00 30.55 2.29
88 89 9.599322 GTACATTGAACTTTTTCTCTGTGTATG 57.401 33.333 0.00 0.00 32.62 2.39
89 90 9.337396 TGTACATTGAACTTTTTCTCTGTGTAT 57.663 29.630 0.00 0.00 32.62 2.29
90 91 8.725405 TGTACATTGAACTTTTTCTCTGTGTA 57.275 30.769 0.00 0.00 32.62 2.90
91 92 7.624360 TGTACATTGAACTTTTTCTCTGTGT 57.376 32.000 0.00 0.00 32.62 3.72
92 93 8.397906 TCTTGTACATTGAACTTTTTCTCTGTG 58.602 33.333 0.00 0.00 32.62 3.66
93 94 8.506168 TCTTGTACATTGAACTTTTTCTCTGT 57.494 30.769 0.00 0.00 33.95 3.41
94 95 9.443283 CTTCTTGTACATTGAACTTTTTCTCTG 57.557 33.333 0.00 0.00 32.36 3.35
95 96 8.624776 CCTTCTTGTACATTGAACTTTTTCTCT 58.375 33.333 0.00 0.00 32.36 3.10
96 97 8.621286 TCCTTCTTGTACATTGAACTTTTTCTC 58.379 33.333 0.00 0.00 32.36 2.87
97 98 8.519799 TCCTTCTTGTACATTGAACTTTTTCT 57.480 30.769 0.00 0.00 32.36 2.52
98 99 9.581099 TTTCCTTCTTGTACATTGAACTTTTTC 57.419 29.630 0.00 0.00 0.00 2.29
99 100 9.936759 TTTTCCTTCTTGTACATTGAACTTTTT 57.063 25.926 0.00 0.00 0.00 1.94
113 114 8.049721 CCACTCTTCCTATATTTTCCTTCTTGT 58.950 37.037 0.00 0.00 0.00 3.16
114 115 8.267894 TCCACTCTTCCTATATTTTCCTTCTTG 58.732 37.037 0.00 0.00 0.00 3.02
115 116 8.393959 TCCACTCTTCCTATATTTTCCTTCTT 57.606 34.615 0.00 0.00 0.00 2.52
116 117 7.996758 TCCACTCTTCCTATATTTTCCTTCT 57.003 36.000 0.00 0.00 0.00 2.85
117 118 7.174080 GCATCCACTCTTCCTATATTTTCCTTC 59.826 40.741 0.00 0.00 0.00 3.46
118 119 7.001073 GCATCCACTCTTCCTATATTTTCCTT 58.999 38.462 0.00 0.00 0.00 3.36
119 120 6.101734 TGCATCCACTCTTCCTATATTTTCCT 59.898 38.462 0.00 0.00 0.00 3.36
120 121 6.299141 TGCATCCACTCTTCCTATATTTTCC 58.701 40.000 0.00 0.00 0.00 3.13
121 122 7.446625 ACATGCATCCACTCTTCCTATATTTTC 59.553 37.037 0.00 0.00 0.00 2.29
122 123 7.293073 ACATGCATCCACTCTTCCTATATTTT 58.707 34.615 0.00 0.00 0.00 1.82
123 124 6.845908 ACATGCATCCACTCTTCCTATATTT 58.154 36.000 0.00 0.00 0.00 1.40
124 125 6.445451 ACATGCATCCACTCTTCCTATATT 57.555 37.500 0.00 0.00 0.00 1.28
125 126 5.337089 CGACATGCATCCACTCTTCCTATAT 60.337 44.000 0.00 0.00 0.00 0.86
126 127 4.021981 CGACATGCATCCACTCTTCCTATA 60.022 45.833 0.00 0.00 0.00 1.31
127 128 3.244009 CGACATGCATCCACTCTTCCTAT 60.244 47.826 0.00 0.00 0.00 2.57
128 129 2.101415 CGACATGCATCCACTCTTCCTA 59.899 50.000 0.00 0.00 0.00 2.94
129 130 1.134580 CGACATGCATCCACTCTTCCT 60.135 52.381 0.00 0.00 0.00 3.36
130 131 1.293924 CGACATGCATCCACTCTTCC 58.706 55.000 0.00 0.00 0.00 3.46
131 132 0.654683 GCGACATGCATCCACTCTTC 59.345 55.000 0.00 0.00 45.45 2.87
132 133 2.772739 GCGACATGCATCCACTCTT 58.227 52.632 0.00 0.00 45.45 2.85
133 134 4.528674 GCGACATGCATCCACTCT 57.471 55.556 0.00 0.00 45.45 3.24
149 150 1.165907 TCATCGGAATCGGCAATGGC 61.166 55.000 0.00 0.00 40.13 4.40
150 151 1.308047 TTCATCGGAATCGGCAATGG 58.692 50.000 0.00 0.00 36.95 3.16
159 160 4.377897 GGAACGTAAGGATTCATCGGAAT 58.622 43.478 0.00 0.00 43.66 3.01
160 161 3.431207 GGGAACGTAAGGATTCATCGGAA 60.431 47.826 0.00 0.00 46.39 4.30
161 162 2.101917 GGGAACGTAAGGATTCATCGGA 59.898 50.000 0.00 0.00 46.39 4.55
162 163 2.480845 GGGAACGTAAGGATTCATCGG 58.519 52.381 0.00 0.00 46.39 4.18
188 189 0.037590 TCCCAGTGGTGTTATGGCAC 59.962 55.000 8.74 0.00 38.56 5.01
189 190 0.327924 CTCCCAGTGGTGTTATGGCA 59.672 55.000 8.74 0.00 32.46 4.92
190 191 0.618458 TCTCCCAGTGGTGTTATGGC 59.382 55.000 8.74 0.00 32.46 4.40
191 192 2.356125 CCTTCTCCCAGTGGTGTTATGG 60.356 54.545 8.74 0.00 0.00 2.74
192 193 2.356125 CCCTTCTCCCAGTGGTGTTATG 60.356 54.545 8.74 0.00 0.00 1.90
193 194 1.916181 CCCTTCTCCCAGTGGTGTTAT 59.084 52.381 8.74 0.00 0.00 1.89
194 195 1.358152 CCCTTCTCCCAGTGGTGTTA 58.642 55.000 8.74 0.00 0.00 2.41
195 196 0.697854 ACCCTTCTCCCAGTGGTGTT 60.698 55.000 8.74 0.00 0.00 3.32
196 197 1.073706 ACCCTTCTCCCAGTGGTGT 60.074 57.895 8.74 0.00 0.00 4.16
197 198 1.127567 TCACCCTTCTCCCAGTGGTG 61.128 60.000 8.74 0.00 46.19 4.17
198 199 0.838122 CTCACCCTTCTCCCAGTGGT 60.838 60.000 8.74 0.00 0.00 4.16
199 200 1.557269 CCTCACCCTTCTCCCAGTGG 61.557 65.000 0.63 0.63 0.00 4.00
200 201 1.557269 CCCTCACCCTTCTCCCAGTG 61.557 65.000 0.00 0.00 0.00 3.66
201 202 1.229658 CCCTCACCCTTCTCCCAGT 60.230 63.158 0.00 0.00 0.00 4.00
202 203 1.081092 TCCCTCACCCTTCTCCCAG 59.919 63.158 0.00 0.00 0.00 4.45
203 204 1.229529 GTCCCTCACCCTTCTCCCA 60.230 63.158 0.00 0.00 0.00 4.37
204 205 1.081277 AGTCCCTCACCCTTCTCCC 59.919 63.158 0.00 0.00 0.00 4.30
205 206 0.252284 TCAGTCCCTCACCCTTCTCC 60.252 60.000 0.00 0.00 0.00 3.71
206 207 1.190643 CTCAGTCCCTCACCCTTCTC 58.809 60.000 0.00 0.00 0.00 2.87
207 208 0.252467 CCTCAGTCCCTCACCCTTCT 60.252 60.000 0.00 0.00 0.00 2.85
208 209 1.268283 CCCTCAGTCCCTCACCCTTC 61.268 65.000 0.00 0.00 0.00 3.46
209 210 1.229658 CCCTCAGTCCCTCACCCTT 60.230 63.158 0.00 0.00 0.00 3.95
210 211 2.452114 CCCTCAGTCCCTCACCCT 59.548 66.667 0.00 0.00 0.00 4.34
211 212 2.689034 CCCCTCAGTCCCTCACCC 60.689 72.222 0.00 0.00 0.00 4.61
212 213 1.229529 TTCCCCTCAGTCCCTCACC 60.230 63.158 0.00 0.00 0.00 4.02
213 214 0.252284 TCTTCCCCTCAGTCCCTCAC 60.252 60.000 0.00 0.00 0.00 3.51
214 215 0.491823 TTCTTCCCCTCAGTCCCTCA 59.508 55.000 0.00 0.00 0.00 3.86
215 216 0.906066 GTTCTTCCCCTCAGTCCCTC 59.094 60.000 0.00 0.00 0.00 4.30
216 217 0.547954 GGTTCTTCCCCTCAGTCCCT 60.548 60.000 0.00 0.00 0.00 4.20
217 218 1.992037 GGTTCTTCCCCTCAGTCCC 59.008 63.158 0.00 0.00 0.00 4.46
227 228 5.310409 TCCTCATATGAATGGGTTCTTCC 57.690 43.478 6.90 0.00 35.33 3.46
228 229 5.240403 GCTTCCTCATATGAATGGGTTCTTC 59.760 44.000 6.90 0.00 35.33 2.87
229 230 5.136105 GCTTCCTCATATGAATGGGTTCTT 58.864 41.667 6.90 0.00 35.33 2.52
230 231 4.723309 GCTTCCTCATATGAATGGGTTCT 58.277 43.478 6.90 0.00 35.33 3.01
231 232 3.499918 CGCTTCCTCATATGAATGGGTTC 59.500 47.826 6.90 0.00 30.92 3.62
232 233 3.480470 CGCTTCCTCATATGAATGGGTT 58.520 45.455 6.90 0.00 30.92 4.11
233 234 2.811873 GCGCTTCCTCATATGAATGGGT 60.812 50.000 6.90 0.00 30.92 4.51
234 235 1.808945 GCGCTTCCTCATATGAATGGG 59.191 52.381 6.90 5.04 33.61 4.00
235 236 1.808945 GGCGCTTCCTCATATGAATGG 59.191 52.381 7.64 5.78 33.61 3.16
236 237 1.808945 GGGCGCTTCCTCATATGAATG 59.191 52.381 7.64 1.32 34.39 2.67
237 238 1.421268 TGGGCGCTTCCTCATATGAAT 59.579 47.619 7.64 0.00 34.39 2.57
238 239 0.836606 TGGGCGCTTCCTCATATGAA 59.163 50.000 7.64 0.00 34.39 2.57
239 240 0.836606 TTGGGCGCTTCCTCATATGA 59.163 50.000 7.64 5.07 34.39 2.15
240 241 1.233019 CTTGGGCGCTTCCTCATATG 58.767 55.000 7.64 0.00 34.39 1.78
241 242 0.536006 GCTTGGGCGCTTCCTCATAT 60.536 55.000 7.64 0.00 34.39 1.78
242 243 1.153168 GCTTGGGCGCTTCCTCATA 60.153 57.895 7.64 0.00 34.39 2.15
243 244 2.439156 GCTTGGGCGCTTCCTCAT 60.439 61.111 7.64 0.00 34.39 2.90
244 245 4.722700 GGCTTGGGCGCTTCCTCA 62.723 66.667 7.64 0.00 39.81 3.86
245 246 4.722700 TGGCTTGGGCGCTTCCTC 62.723 66.667 7.64 0.00 39.81 3.71
246 247 4.052518 ATGGCTTGGGCGCTTCCT 62.053 61.111 7.64 0.00 39.81 3.36
247 248 3.830192 CATGGCTTGGGCGCTTCC 61.830 66.667 7.64 0.33 39.81 3.46
248 249 3.830192 CCATGGCTTGGGCGCTTC 61.830 66.667 7.64 0.02 42.33 3.86
264 265 3.774599 AATTCATCCTCCGCGGGCC 62.775 63.158 27.83 0.00 0.00 5.80
265 266 1.786049 GAAATTCATCCTCCGCGGGC 61.786 60.000 27.83 0.00 0.00 6.13
266 267 0.463654 TGAAATTCATCCTCCGCGGG 60.464 55.000 27.83 16.14 0.00 6.13
267 268 1.064060 GTTGAAATTCATCCTCCGCGG 59.936 52.381 22.12 22.12 0.00 6.46
268 269 2.009774 AGTTGAAATTCATCCTCCGCG 58.990 47.619 0.00 0.00 0.00 6.46
269 270 4.192317 AGTAGTTGAAATTCATCCTCCGC 58.808 43.478 0.00 0.00 0.00 5.54
270 271 6.403636 CCAAAGTAGTTGAAATTCATCCTCCG 60.404 42.308 0.00 0.00 39.87 4.63
295 296 2.579013 GCTTGTGACGAAGCAGTAAC 57.421 50.000 12.60 0.00 46.46 2.50
329 330 0.320374 TCACAAAGGTAGCCTCACCG 59.680 55.000 0.00 0.00 43.84 4.94
336 337 4.142381 GGATGGATGTTTCACAAAGGTAGC 60.142 45.833 0.00 0.00 0.00 3.58
341 342 5.256474 ACCTAGGATGGATGTTTCACAAAG 58.744 41.667 17.98 0.00 0.00 2.77
370 375 4.755266 TTAGAGGGTTTCCATGAGCTAC 57.245 45.455 0.00 0.00 34.83 3.58
374 379 3.217626 GGCATTAGAGGGTTTCCATGAG 58.782 50.000 0.00 0.00 34.83 2.90
378 383 1.281419 TCGGCATTAGAGGGTTTCCA 58.719 50.000 0.00 0.00 34.83 3.53
384 389 2.985896 TGACTTTTCGGCATTAGAGGG 58.014 47.619 0.00 0.00 0.00 4.30
386 391 6.238211 CCAACTATGACTTTTCGGCATTAGAG 60.238 42.308 0.00 0.00 0.00 2.43
436 441 6.157820 CCCTCTCTCCCTCTTTCTTTCTTATT 59.842 42.308 0.00 0.00 0.00 1.40
438 443 5.026790 CCCTCTCTCCCTCTTTCTTTCTTA 58.973 45.833 0.00 0.00 0.00 2.10
439 444 3.843619 CCCTCTCTCCCTCTTTCTTTCTT 59.156 47.826 0.00 0.00 0.00 2.52
440 445 3.181400 ACCCTCTCTCCCTCTTTCTTTCT 60.181 47.826 0.00 0.00 0.00 2.52
441 446 3.178046 ACCCTCTCTCCCTCTTTCTTTC 58.822 50.000 0.00 0.00 0.00 2.62
444 449 3.283712 AAACCCTCTCTCCCTCTTTCT 57.716 47.619 0.00 0.00 0.00 2.52
445 450 5.702065 ATAAAACCCTCTCTCCCTCTTTC 57.298 43.478 0.00 0.00 0.00 2.62
447 452 5.608860 CCATATAAAACCCTCTCTCCCTCTT 59.391 44.000 0.00 0.00 0.00 2.85
448 453 5.158889 CCATATAAAACCCTCTCTCCCTCT 58.841 45.833 0.00 0.00 0.00 3.69
449 454 4.287326 CCCATATAAAACCCTCTCTCCCTC 59.713 50.000 0.00 0.00 0.00 4.30
451 456 4.240323 TCCCATATAAAACCCTCTCTCCC 58.760 47.826 0.00 0.00 0.00 4.30
452 457 7.757242 ATATCCCATATAAAACCCTCTCTCC 57.243 40.000 0.00 0.00 0.00 3.71
453 458 9.495382 ACTATATCCCATATAAAACCCTCTCTC 57.505 37.037 0.00 0.00 0.00 3.20
454 459 9.860393 AACTATATCCCATATAAAACCCTCTCT 57.140 33.333 0.00 0.00 0.00 3.10
456 461 8.759782 CGAACTATATCCCATATAAAACCCTCT 58.240 37.037 0.00 0.00 0.00 3.69
457 462 8.537858 ACGAACTATATCCCATATAAAACCCTC 58.462 37.037 0.00 0.00 0.00 4.30
458 463 8.445361 ACGAACTATATCCCATATAAAACCCT 57.555 34.615 0.00 0.00 0.00 4.34
459 464 9.511272 AAACGAACTATATCCCATATAAAACCC 57.489 33.333 0.00 0.00 0.00 4.11
466 471 8.871125 ACTCTTCAAACGAACTATATCCCATAT 58.129 33.333 0.00 0.00 0.00 1.78
467 472 8.246430 ACTCTTCAAACGAACTATATCCCATA 57.754 34.615 0.00 0.00 0.00 2.74
468 473 7.125792 ACTCTTCAAACGAACTATATCCCAT 57.874 36.000 0.00 0.00 0.00 4.00
471 476 9.583765 ACTTAACTCTTCAAACGAACTATATCC 57.416 33.333 0.00 0.00 0.00 2.59
478 483 9.634300 CTCTTAAACTTAACTCTTCAAACGAAC 57.366 33.333 0.00 0.00 0.00 3.95
479 484 9.374838 ACTCTTAAACTTAACTCTTCAAACGAA 57.625 29.630 0.00 0.00 0.00 3.85
480 485 8.937634 ACTCTTAAACTTAACTCTTCAAACGA 57.062 30.769 0.00 0.00 0.00 3.85
481 486 9.983804 AAACTCTTAAACTTAACTCTTCAAACG 57.016 29.630 0.00 0.00 0.00 3.60
485 490 9.886132 ACTGAAACTCTTAAACTTAACTCTTCA 57.114 29.630 0.00 0.00 0.00 3.02
496 501 9.783256 ACACAAACATAACTGAAACTCTTAAAC 57.217 29.630 0.00 0.00 0.00 2.01
513 666 9.883142 TTGAGGAATTAAGAAAAACACAAACAT 57.117 25.926 0.00 0.00 0.00 2.71
545 698 9.225682 TGAAATGGACCCTTATATCTTAACTCT 57.774 33.333 0.00 0.00 0.00 3.24
546 699 9.495572 CTGAAATGGACCCTTATATCTTAACTC 57.504 37.037 0.00 0.00 0.00 3.01
547 700 8.440771 CCTGAAATGGACCCTTATATCTTAACT 58.559 37.037 0.00 0.00 0.00 2.24
548 701 7.665974 CCCTGAAATGGACCCTTATATCTTAAC 59.334 40.741 0.00 0.00 0.00 2.01
549 702 7.202279 CCCCTGAAATGGACCCTTATATCTTAA 60.202 40.741 0.00 0.00 0.00 1.85
550 703 6.274672 CCCCTGAAATGGACCCTTATATCTTA 59.725 42.308 0.00 0.00 0.00 2.10
551 704 5.075067 CCCCTGAAATGGACCCTTATATCTT 59.925 44.000 0.00 0.00 0.00 2.40
552 705 4.603610 CCCCTGAAATGGACCCTTATATCT 59.396 45.833 0.00 0.00 0.00 1.98
553 706 4.811063 GCCCCTGAAATGGACCCTTATATC 60.811 50.000 0.00 0.00 0.00 1.63
554 707 3.076032 GCCCCTGAAATGGACCCTTATAT 59.924 47.826 0.00 0.00 0.00 0.86
555 708 2.445525 GCCCCTGAAATGGACCCTTATA 59.554 50.000 0.00 0.00 0.00 0.98
556 709 1.217942 GCCCCTGAAATGGACCCTTAT 59.782 52.381 0.00 0.00 0.00 1.73
557 710 0.629058 GCCCCTGAAATGGACCCTTA 59.371 55.000 0.00 0.00 0.00 2.69
558 711 1.149133 AGCCCCTGAAATGGACCCTT 61.149 55.000 0.00 0.00 0.00 3.95
559 712 0.253630 TAGCCCCTGAAATGGACCCT 60.254 55.000 0.00 0.00 0.00 4.34
560 713 0.629058 TTAGCCCCTGAAATGGACCC 59.371 55.000 0.00 0.00 0.00 4.46
561 714 2.525105 TTTAGCCCCTGAAATGGACC 57.475 50.000 0.00 0.00 0.00 4.46
562 715 5.445964 TCTAATTTAGCCCCTGAAATGGAC 58.554 41.667 0.00 0.00 0.00 4.02
563 716 5.725551 TCTAATTTAGCCCCTGAAATGGA 57.274 39.130 0.00 0.00 0.00 3.41
564 717 5.302823 CCTTCTAATTTAGCCCCTGAAATGG 59.697 44.000 0.00 0.00 0.00 3.16
565 718 5.302823 CCCTTCTAATTTAGCCCCTGAAATG 59.697 44.000 0.00 0.00 0.00 2.32
566 719 5.195756 TCCCTTCTAATTTAGCCCCTGAAAT 59.804 40.000 0.00 0.00 0.00 2.17
567 720 4.542525 TCCCTTCTAATTTAGCCCCTGAAA 59.457 41.667 0.00 0.00 0.00 2.69
568 721 4.079958 GTCCCTTCTAATTTAGCCCCTGAA 60.080 45.833 0.00 0.00 0.00 3.02
569 722 3.458487 GTCCCTTCTAATTTAGCCCCTGA 59.542 47.826 0.00 0.00 0.00 3.86
570 723 3.744530 CGTCCCTTCTAATTTAGCCCCTG 60.745 52.174 0.00 0.00 0.00 4.45
571 724 2.438392 CGTCCCTTCTAATTTAGCCCCT 59.562 50.000 0.00 0.00 0.00 4.79
572 725 2.486727 CCGTCCCTTCTAATTTAGCCCC 60.487 54.545 0.00 0.00 0.00 5.80
573 726 2.847441 CCGTCCCTTCTAATTTAGCCC 58.153 52.381 0.00 0.00 0.00 5.19
574 727 2.158798 AGCCGTCCCTTCTAATTTAGCC 60.159 50.000 0.00 0.00 0.00 3.93
575 728 2.872858 CAGCCGTCCCTTCTAATTTAGC 59.127 50.000 0.00 0.00 0.00 3.09
576 729 4.099573 TCTCAGCCGTCCCTTCTAATTTAG 59.900 45.833 0.00 0.00 0.00 1.85
577 730 4.028131 TCTCAGCCGTCCCTTCTAATTTA 58.972 43.478 0.00 0.00 0.00 1.40
578 731 2.838202 TCTCAGCCGTCCCTTCTAATTT 59.162 45.455 0.00 0.00 0.00 1.82
579 732 2.467880 TCTCAGCCGTCCCTTCTAATT 58.532 47.619 0.00 0.00 0.00 1.40
580 733 2.160721 TCTCAGCCGTCCCTTCTAAT 57.839 50.000 0.00 0.00 0.00 1.73
581 734 1.757118 CATCTCAGCCGTCCCTTCTAA 59.243 52.381 0.00 0.00 0.00 2.10
584 737 1.522580 GCATCTCAGCCGTCCCTTC 60.523 63.158 0.00 0.00 0.00 3.46
597 750 3.741249 CCATGATTAGCTGAGTGCATCT 58.259 45.455 0.00 0.00 45.94 2.90
603 756 2.695666 ACGTAGCCATGATTAGCTGAGT 59.304 45.455 0.00 2.34 40.28 3.41
659 820 1.486211 GGAGGAGAGACGATTGGGAA 58.514 55.000 0.00 0.00 0.00 3.97
663 824 1.953686 GAGAGGGAGGAGAGACGATTG 59.046 57.143 0.00 0.00 0.00 2.67
679 840 2.178890 GCCATGCAAGAGCGGAGAG 61.179 63.158 0.00 0.00 46.23 3.20
680 841 2.124983 GCCATGCAAGAGCGGAGA 60.125 61.111 0.00 0.00 46.23 3.71
681 842 2.124819 AGCCATGCAAGAGCGGAG 60.125 61.111 0.00 0.00 46.23 4.63
682 843 2.437180 CAGCCATGCAAGAGCGGA 60.437 61.111 0.00 0.00 46.23 5.54
683 844 1.989966 CTTCAGCCATGCAAGAGCGG 61.990 60.000 0.00 0.00 46.23 5.52
685 846 1.139095 GCTTCAGCCATGCAAGAGC 59.861 57.895 0.00 0.00 36.73 4.09
688 849 1.203758 TGAATGCTTCAGCCATGCAAG 59.796 47.619 0.00 0.00 38.58 4.01
689 850 1.258676 TGAATGCTTCAGCCATGCAA 58.741 45.000 0.00 0.00 38.58 4.08
696 862 1.717645 CGCAAGTTTGAATGCTTCAGC 59.282 47.619 0.00 0.00 41.38 4.26
716 882 2.505337 CATGCATGCACGCACCAC 60.505 61.111 25.37 0.00 46.56 4.16
771 943 4.817063 CGGCGCCATTTCTGCACG 62.817 66.667 28.98 3.82 0.00 5.34
817 1005 0.464916 TGATCGATCGGGGAAGACGA 60.465 55.000 20.03 0.00 45.19 4.20
819 1007 1.538419 GGTTGATCGATCGGGGAAGAC 60.538 57.143 20.03 9.42 0.00 3.01
886 1074 2.736826 GGCGAGGGAGGAGGAAAGG 61.737 68.421 0.00 0.00 0.00 3.11
904 1092 1.743252 GAAGGTTGCTGGAGCGAGG 60.743 63.158 0.00 0.00 45.83 4.63
905 1093 0.321122 AAGAAGGTTGCTGGAGCGAG 60.321 55.000 0.00 0.00 45.83 5.03
906 1094 0.320771 GAAGAAGGTTGCTGGAGCGA 60.321 55.000 0.00 0.00 45.83 4.93
907 1095 1.301677 GGAAGAAGGTTGCTGGAGCG 61.302 60.000 0.00 0.00 45.83 5.03
908 1096 0.037447 AGGAAGAAGGTTGCTGGAGC 59.963 55.000 0.00 0.00 42.50 4.70
928 1116 6.097132 TGATGGATCAATCAAGCAAGAAGCT 61.097 40.000 10.53 0.00 44.93 3.74
929 1117 4.097437 TGATGGATCAATCAAGCAAGAAGC 59.903 41.667 10.53 0.00 36.09 3.86
937 1125 2.236766 GGGGCTGATGGATCAATCAAG 58.763 52.381 13.85 9.13 36.16 3.02
985 1173 2.182842 CCATTGCTGCGCCTACTCC 61.183 63.158 4.18 0.00 0.00 3.85
989 1177 3.280938 AACCCCATTGCTGCGCCTA 62.281 57.895 4.18 0.00 0.00 3.93
1627 1844 0.586010 GAAGACGACGACGACGATCC 60.586 60.000 25.15 13.36 42.66 3.36
1632 1849 1.970608 CAAGAAGAAGACGACGACGAC 59.029 52.381 15.32 8.08 42.66 4.34
1673 1898 1.751351 ACGATGAGTGATGGTGACGAT 59.249 47.619 0.00 0.00 0.00 3.73
1741 1970 6.611236 AGAGAAGAAAAAGAAAATGGGGTTCA 59.389 34.615 0.00 0.00 0.00 3.18
1768 2004 3.447742 TGGACAATCGATCGAAGATGTG 58.552 45.455 28.09 20.08 45.12 3.21
1769 2005 3.801114 TGGACAATCGATCGAAGATGT 57.199 42.857 23.50 24.53 45.12 3.06
1770 2006 6.769608 TTTATGGACAATCGATCGAAGATG 57.230 37.500 23.50 21.69 45.12 2.90
1771 2007 6.073548 GCTTTTATGGACAATCGATCGAAGAT 60.074 38.462 23.50 10.03 45.12 2.40
1773 2009 5.006649 TGCTTTTATGGACAATCGATCGAAG 59.993 40.000 23.50 19.38 0.00 3.79
1797 2039 8.862325 TGAGTGAAACATGGTCTACAATATTT 57.138 30.769 0.00 0.00 41.43 1.40
1862 2107 5.936956 AGAAAACAGAGGTGATGAGTGAATC 59.063 40.000 0.00 0.00 0.00 2.52
1876 2121 7.869937 TCATCTTTGTACAGAGAGAAAACAGAG 59.130 37.037 19.64 3.78 0.00 3.35
1887 2134 6.851222 ACACAAGTTCATCTTTGTACAGAG 57.149 37.500 7.08 7.08 33.63 3.35
1904 2155 7.063898 CCTTGAATGAGATACACAGTACACAAG 59.936 40.741 0.00 0.00 0.00 3.16
1926 2185 3.207778 TCGACTGGTAACCAAAACCTTG 58.792 45.455 0.00 0.00 37.91 3.61
1929 2188 4.841443 ATTTCGACTGGTAACCAAAACC 57.159 40.909 0.00 0.00 37.53 3.27
1930 2189 6.267070 TGAAATTTCGACTGGTAACCAAAAC 58.733 36.000 13.34 0.00 30.80 2.43
1931 2190 6.452494 TGAAATTTCGACTGGTAACCAAAA 57.548 33.333 13.34 0.00 30.80 2.44
1932 2191 6.319152 TCTTGAAATTTCGACTGGTAACCAAA 59.681 34.615 13.34 0.00 30.80 3.28
1933 2192 5.823570 TCTTGAAATTTCGACTGGTAACCAA 59.176 36.000 13.34 0.00 30.80 3.67
1934 2193 5.369833 TCTTGAAATTTCGACTGGTAACCA 58.630 37.500 13.34 0.00 0.00 3.67
1935 2194 5.934935 TCTTGAAATTTCGACTGGTAACC 57.065 39.130 13.34 0.00 0.00 2.85
1936 2195 7.537649 GGAAATCTTGAAATTTCGACTGGTAAC 59.462 37.037 13.34 1.06 43.52 2.50
1937 2196 7.308951 GGGAAATCTTGAAATTTCGACTGGTAA 60.309 37.037 13.34 0.00 43.52 2.85
1938 2197 6.150474 GGGAAATCTTGAAATTTCGACTGGTA 59.850 38.462 13.34 0.00 43.52 3.25
1939 2198 5.048013 GGGAAATCTTGAAATTTCGACTGGT 60.048 40.000 13.34 0.00 43.52 4.00
1940 2199 5.048083 TGGGAAATCTTGAAATTTCGACTGG 60.048 40.000 13.34 0.77 43.52 4.00
1941 2200 6.012658 TGGGAAATCTTGAAATTTCGACTG 57.987 37.500 13.34 1.46 43.52 3.51
1942 2201 6.434028 TCATGGGAAATCTTGAAATTTCGACT 59.566 34.615 13.34 0.00 43.52 4.18
1943 2202 6.620678 TCATGGGAAATCTTGAAATTTCGAC 58.379 36.000 13.34 0.00 43.52 4.20
1944 2203 6.832520 TCATGGGAAATCTTGAAATTTCGA 57.167 33.333 13.34 10.62 43.52 3.71
1945 2204 9.754382 ATAATCATGGGAAATCTTGAAATTTCG 57.246 29.630 13.34 0.46 43.52 3.46
1947 2206 9.754382 CGATAATCATGGGAAATCTTGAAATTT 57.246 29.630 0.00 0.00 0.00 1.82
1948 2207 8.917088 ACGATAATCATGGGAAATCTTGAAATT 58.083 29.630 0.00 0.00 0.00 1.82
1949 2208 8.355169 CACGATAATCATGGGAAATCTTGAAAT 58.645 33.333 0.00 0.00 0.00 2.17
1950 2209 7.339212 ACACGATAATCATGGGAAATCTTGAAA 59.661 33.333 0.00 0.00 30.19 2.69
1951 2210 6.828273 ACACGATAATCATGGGAAATCTTGAA 59.172 34.615 0.00 0.00 30.19 2.69
1952 2211 6.356556 ACACGATAATCATGGGAAATCTTGA 58.643 36.000 0.00 0.00 30.19 3.02
1953 2212 6.624352 ACACGATAATCATGGGAAATCTTG 57.376 37.500 0.00 0.00 31.06 3.02
1954 2213 8.924511 AATACACGATAATCATGGGAAATCTT 57.075 30.769 0.00 0.00 0.00 2.40
1955 2214 8.924511 AAATACACGATAATCATGGGAAATCT 57.075 30.769 0.00 0.00 0.00 2.40
1956 2215 8.237267 GGAAATACACGATAATCATGGGAAATC 58.763 37.037 0.00 0.00 0.00 2.17
1957 2216 7.094805 CGGAAATACACGATAATCATGGGAAAT 60.095 37.037 0.00 0.00 0.00 2.17
1958 2217 6.203915 CGGAAATACACGATAATCATGGGAAA 59.796 38.462 0.00 0.00 0.00 3.13
1959 2218 5.699001 CGGAAATACACGATAATCATGGGAA 59.301 40.000 0.00 0.00 0.00 3.97
1960 2219 5.221561 ACGGAAATACACGATAATCATGGGA 60.222 40.000 0.00 0.00 0.00 4.37
1961 2220 4.994852 ACGGAAATACACGATAATCATGGG 59.005 41.667 0.00 0.00 0.00 4.00
1962 2221 5.614668 GCACGGAAATACACGATAATCATGG 60.615 44.000 0.00 0.00 0.00 3.66
1963 2222 5.374080 GCACGGAAATACACGATAATCATG 58.626 41.667 0.00 0.00 0.00 3.07
1964 2223 4.451096 GGCACGGAAATACACGATAATCAT 59.549 41.667 0.00 0.00 0.00 2.45
1965 2224 3.805422 GGCACGGAAATACACGATAATCA 59.195 43.478 0.00 0.00 0.00 2.57
1966 2225 3.185797 GGGCACGGAAATACACGATAATC 59.814 47.826 0.00 0.00 0.00 1.75
1967 2226 3.135994 GGGCACGGAAATACACGATAAT 58.864 45.455 0.00 0.00 0.00 1.28
1968 2227 2.553086 GGGCACGGAAATACACGATAA 58.447 47.619 0.00 0.00 0.00 1.75
1969 2228 1.202557 GGGGCACGGAAATACACGATA 60.203 52.381 0.00 0.00 0.00 2.92
1970 2229 0.463116 GGGGCACGGAAATACACGAT 60.463 55.000 0.00 0.00 0.00 3.73
1971 2230 1.078988 GGGGCACGGAAATACACGA 60.079 57.895 0.00 0.00 0.00 4.35
1972 2231 1.078708 AGGGGCACGGAAATACACG 60.079 57.895 0.00 0.00 0.00 4.49
1973 2232 1.087771 CGAGGGGCACGGAAATACAC 61.088 60.000 0.00 0.00 0.00 2.90
1974 2233 1.219664 CGAGGGGCACGGAAATACA 59.780 57.895 0.00 0.00 0.00 2.29
1975 2234 0.106149 ATCGAGGGGCACGGAAATAC 59.894 55.000 0.00 0.00 0.00 1.89
1976 2235 0.834612 AATCGAGGGGCACGGAAATA 59.165 50.000 0.00 0.00 0.00 1.40
1977 2236 0.834612 TAATCGAGGGGCACGGAAAT 59.165 50.000 0.00 0.00 0.00 2.17
1978 2237 0.614294 TTAATCGAGGGGCACGGAAA 59.386 50.000 0.00 0.00 0.00 3.13
1979 2238 0.834612 ATTAATCGAGGGGCACGGAA 59.165 50.000 0.00 0.00 0.00 4.30
1980 2239 0.391597 GATTAATCGAGGGGCACGGA 59.608 55.000 0.00 0.00 0.00 4.69
1981 2240 2.914379 GATTAATCGAGGGGCACGG 58.086 57.895 0.00 0.00 0.00 4.94
1992 2251 2.683968 TGCTCGGTATGGCGATTAATC 58.316 47.619 5.30 5.30 0.00 1.75
1993 2252 2.831685 TGCTCGGTATGGCGATTAAT 57.168 45.000 0.00 0.00 0.00 1.40
1994 2253 2.605837 TTGCTCGGTATGGCGATTAA 57.394 45.000 0.00 0.00 0.00 1.40
1995 2254 2.605837 TTTGCTCGGTATGGCGATTA 57.394 45.000 0.00 0.00 0.00 1.75
1996 2255 1.745232 TTTTGCTCGGTATGGCGATT 58.255 45.000 0.00 0.00 0.00 3.34
1997 2256 1.745232 TTTTTGCTCGGTATGGCGAT 58.255 45.000 0.00 0.00 0.00 4.58
1998 2257 3.234979 TTTTTGCTCGGTATGGCGA 57.765 47.368 0.00 0.00 0.00 5.54
2044 2303 9.485206 ACATACTTTACTGTAAATCGAGTGTTT 57.515 29.630 12.95 0.68 0.00 2.83
2046 2305 9.784680 CTACATACTTTACTGTAAATCGAGTGT 57.215 33.333 12.95 14.20 0.00 3.55
2047 2306 9.234384 CCTACATACTTTACTGTAAATCGAGTG 57.766 37.037 12.95 10.19 0.00 3.51
2048 2307 9.182214 TCCTACATACTTTACTGTAAATCGAGT 57.818 33.333 12.95 9.93 0.00 4.18
2079 2338 8.143835 GCCATAACCAACTCTTATTGCATTAAT 58.856 33.333 1.73 0.00 0.00 1.40
2080 2339 7.123397 TGCCATAACCAACTCTTATTGCATTAA 59.877 33.333 0.00 0.00 30.98 1.40
2081 2340 6.605194 TGCCATAACCAACTCTTATTGCATTA 59.395 34.615 0.00 0.00 30.98 1.90
2082 2341 5.421693 TGCCATAACCAACTCTTATTGCATT 59.578 36.000 0.00 0.00 30.98 3.56
2083 2342 4.955450 TGCCATAACCAACTCTTATTGCAT 59.045 37.500 0.00 0.00 30.98 3.96
2084 2343 4.339748 TGCCATAACCAACTCTTATTGCA 58.660 39.130 0.00 0.00 32.59 4.08
2085 2344 4.981806 TGCCATAACCAACTCTTATTGC 57.018 40.909 0.00 0.00 0.00 3.56
2086 2345 6.455360 ACATGCCATAACCAACTCTTATTG 57.545 37.500 0.00 0.00 0.00 1.90
2087 2346 6.127366 CCAACATGCCATAACCAACTCTTATT 60.127 38.462 0.00 0.00 0.00 1.40
2088 2347 5.360714 CCAACATGCCATAACCAACTCTTAT 59.639 40.000 0.00 0.00 0.00 1.73
2089 2348 4.704540 CCAACATGCCATAACCAACTCTTA 59.295 41.667 0.00 0.00 0.00 2.10
2090 2349 3.511146 CCAACATGCCATAACCAACTCTT 59.489 43.478 0.00 0.00 0.00 2.85
2091 2350 3.091545 CCAACATGCCATAACCAACTCT 58.908 45.455 0.00 0.00 0.00 3.24
2092 2351 2.825532 ACCAACATGCCATAACCAACTC 59.174 45.455 0.00 0.00 0.00 3.01
2093 2352 2.888212 ACCAACATGCCATAACCAACT 58.112 42.857 0.00 0.00 0.00 3.16
2094 2353 3.428862 GCTACCAACATGCCATAACCAAC 60.429 47.826 0.00 0.00 0.00 3.77
2095 2354 2.757868 GCTACCAACATGCCATAACCAA 59.242 45.455 0.00 0.00 0.00 3.67
2096 2355 2.291217 TGCTACCAACATGCCATAACCA 60.291 45.455 0.00 0.00 0.00 3.67
2097 2356 2.374184 TGCTACCAACATGCCATAACC 58.626 47.619 0.00 0.00 0.00 2.85
2111 2370 5.529800 TCAAAACAGAAACTAGGTTGCTACC 59.470 40.000 9.54 9.54 45.39 3.18
2112 2371 6.482308 TCTCAAAACAGAAACTAGGTTGCTAC 59.518 38.462 0.00 0.00 28.15 3.58
2113 2372 6.588204 TCTCAAAACAGAAACTAGGTTGCTA 58.412 36.000 0.00 0.00 28.15 3.49
2114 2373 5.437060 TCTCAAAACAGAAACTAGGTTGCT 58.563 37.500 0.00 0.00 30.33 3.91
2115 2374 5.278022 CCTCTCAAAACAGAAACTAGGTTGC 60.278 44.000 0.00 0.00 0.00 4.17
2116 2375 5.823045 ACCTCTCAAAACAGAAACTAGGTTG 59.177 40.000 0.00 0.00 0.00 3.77
2117 2376 6.002653 ACCTCTCAAAACAGAAACTAGGTT 57.997 37.500 0.00 0.00 0.00 3.50
2118 2377 5.367060 AGACCTCTCAAAACAGAAACTAGGT 59.633 40.000 0.00 0.00 0.00 3.08
2119 2378 5.859495 AGACCTCTCAAAACAGAAACTAGG 58.141 41.667 0.00 0.00 0.00 3.02
2120 2379 6.644592 CAGAGACCTCTCAAAACAGAAACTAG 59.355 42.308 5.13 0.00 45.21 2.57
2121 2380 6.098409 ACAGAGACCTCTCAAAACAGAAACTA 59.902 38.462 5.13 0.00 45.21 2.24
2122 2381 5.104735 ACAGAGACCTCTCAAAACAGAAACT 60.105 40.000 5.13 0.00 45.21 2.66
2123 2382 5.119694 ACAGAGACCTCTCAAAACAGAAAC 58.880 41.667 5.13 0.00 45.21 2.78
2124 2383 5.359194 ACAGAGACCTCTCAAAACAGAAA 57.641 39.130 5.13 0.00 45.21 2.52
2125 2384 5.359194 AACAGAGACCTCTCAAAACAGAA 57.641 39.130 5.13 0.00 45.21 3.02
2126 2385 5.359194 AAACAGAGACCTCTCAAAACAGA 57.641 39.130 5.13 0.00 45.21 3.41
2127 2386 5.586243 TCAAAACAGAGACCTCTCAAAACAG 59.414 40.000 5.13 0.00 45.21 3.16
2128 2387 5.496556 TCAAAACAGAGACCTCTCAAAACA 58.503 37.500 5.13 0.00 45.21 2.83
2129 2388 6.436843 TTCAAAACAGAGACCTCTCAAAAC 57.563 37.500 5.13 0.00 45.21 2.43
2130 2389 8.924511 ATATTCAAAACAGAGACCTCTCAAAA 57.075 30.769 5.13 0.00 45.21 2.44
2131 2390 8.924511 AATATTCAAAACAGAGACCTCTCAAA 57.075 30.769 5.13 0.00 45.21 2.69
2132 2391 7.331934 CGAATATTCAAAACAGAGACCTCTCAA 59.668 37.037 15.57 0.00 45.21 3.02
2133 2392 6.813649 CGAATATTCAAAACAGAGACCTCTCA 59.186 38.462 15.57 0.00 45.21 3.27
2134 2393 6.814146 ACGAATATTCAAAACAGAGACCTCTC 59.186 38.462 15.57 0.00 43.17 3.20
2135 2394 6.702329 ACGAATATTCAAAACAGAGACCTCT 58.298 36.000 15.57 0.00 41.37 3.69
2136 2395 6.969828 ACGAATATTCAAAACAGAGACCTC 57.030 37.500 15.57 0.00 0.00 3.85
2137 2396 6.934645 TGAACGAATATTCAAAACAGAGACCT 59.065 34.615 15.57 0.00 35.65 3.85
2138 2397 7.129109 TGAACGAATATTCAAAACAGAGACC 57.871 36.000 15.57 0.00 35.65 3.85
2139 2398 9.267096 GAATGAACGAATATTCAAAACAGAGAC 57.733 33.333 15.57 0.00 41.78 3.36
2140 2399 8.998377 TGAATGAACGAATATTCAAAACAGAGA 58.002 29.630 15.57 0.00 41.78 3.10
2141 2400 9.055248 GTGAATGAACGAATATTCAAAACAGAG 57.945 33.333 15.57 0.00 42.86 3.35
2142 2401 8.783093 AGTGAATGAACGAATATTCAAAACAGA 58.217 29.630 15.57 0.00 42.86 3.41
2143 2402 8.955061 AGTGAATGAACGAATATTCAAAACAG 57.045 30.769 15.57 0.72 42.86 3.16
2155 2414 9.958234 TTGAATTCAAATAAGTGAATGAACGAA 57.042 25.926 18.45 0.00 45.42 3.85
2156 2415 9.958234 TTTGAATTCAAATAAGTGAATGAACGA 57.042 25.926 26.01 1.80 45.42 3.85
2191 2450 8.621286 ACCGAGAATATTTCGAGCAAATTTTAT 58.379 29.630 16.51 0.00 40.36 1.40
2192 2451 7.981142 ACCGAGAATATTTCGAGCAAATTTTA 58.019 30.769 16.51 0.00 40.36 1.52
2193 2452 6.852664 ACCGAGAATATTTCGAGCAAATTTT 58.147 32.000 16.51 0.00 40.36 1.82
2194 2453 6.436843 ACCGAGAATATTTCGAGCAAATTT 57.563 33.333 16.51 0.00 40.36 1.82
2195 2454 7.730364 ATACCGAGAATATTTCGAGCAAATT 57.270 32.000 16.51 0.00 40.36 1.82
2196 2455 7.730364 AATACCGAGAATATTTCGAGCAAAT 57.270 32.000 16.51 0.00 40.36 2.32
2197 2456 7.065324 ACAAATACCGAGAATATTTCGAGCAAA 59.935 33.333 16.51 0.00 40.36 3.68
2198 2457 6.537301 ACAAATACCGAGAATATTTCGAGCAA 59.463 34.615 16.51 4.87 40.36 3.91
2199 2458 6.046593 ACAAATACCGAGAATATTTCGAGCA 58.953 36.000 16.51 6.31 40.36 4.26
2200 2459 6.526566 ACAAATACCGAGAATATTTCGAGC 57.473 37.500 16.51 0.00 40.36 5.03
2201 2460 6.129168 CCGACAAATACCGAGAATATTTCGAG 60.129 42.308 16.51 11.24 40.36 4.04
2202 2461 5.688621 CCGACAAATACCGAGAATATTTCGA 59.311 40.000 16.51 0.00 40.36 3.71
2203 2462 5.461078 ACCGACAAATACCGAGAATATTTCG 59.539 40.000 10.96 10.96 37.78 3.46
2204 2463 6.839820 ACCGACAAATACCGAGAATATTTC 57.160 37.500 0.00 0.00 31.33 2.17
2205 2464 8.897872 AATACCGACAAATACCGAGAATATTT 57.102 30.769 0.00 0.00 33.45 1.40
2206 2465 8.897872 AAATACCGACAAATACCGAGAATATT 57.102 30.769 0.00 0.00 0.00 1.28
2207 2466 8.365647 AGAAATACCGACAAATACCGAGAATAT 58.634 33.333 0.00 0.00 0.00 1.28
2208 2467 7.719483 AGAAATACCGACAAATACCGAGAATA 58.281 34.615 0.00 0.00 0.00 1.75
2209 2468 6.579865 AGAAATACCGACAAATACCGAGAAT 58.420 36.000 0.00 0.00 0.00 2.40
2210 2469 5.969423 AGAAATACCGACAAATACCGAGAA 58.031 37.500 0.00 0.00 0.00 2.87
2211 2470 5.585390 GAGAAATACCGACAAATACCGAGA 58.415 41.667 0.00 0.00 0.00 4.04
2212 2471 4.440103 CGAGAAATACCGACAAATACCGAG 59.560 45.833 0.00 0.00 0.00 4.63
2213 2472 4.096231 TCGAGAAATACCGACAAATACCGA 59.904 41.667 0.00 0.00 0.00 4.69
2214 2473 4.353737 TCGAGAAATACCGACAAATACCG 58.646 43.478 0.00 0.00 0.00 4.02
2215 2474 7.095899 GGTTATCGAGAAATACCGACAAATACC 60.096 40.741 0.00 0.00 37.64 2.73
2216 2475 7.357859 CGGTTATCGAGAAATACCGACAAATAC 60.358 40.741 14.95 0.00 41.22 1.89
2217 2476 6.638063 CGGTTATCGAGAAATACCGACAAATA 59.362 38.462 14.95 0.00 41.22 1.40
2218 2477 5.461078 CGGTTATCGAGAAATACCGACAAAT 59.539 40.000 14.95 0.00 41.22 2.32
2219 2478 4.799949 CGGTTATCGAGAAATACCGACAAA 59.200 41.667 14.95 0.00 41.22 2.83
2220 2479 4.142403 ACGGTTATCGAGAAATACCGACAA 60.142 41.667 24.14 0.00 41.22 3.18
2221 2480 3.378112 ACGGTTATCGAGAAATACCGACA 59.622 43.478 24.14 0.00 41.22 4.35
2222 2481 3.727723 CACGGTTATCGAGAAATACCGAC 59.272 47.826 24.14 0.00 41.22 4.79
2223 2482 3.243168 CCACGGTTATCGAGAAATACCGA 60.243 47.826 24.14 0.00 41.22 4.69
2224 2483 3.047796 CCACGGTTATCGAGAAATACCG 58.952 50.000 17.68 17.68 42.43 4.02
2225 2484 4.050852 ACCACGGTTATCGAGAAATACC 57.949 45.455 0.00 0.00 42.43 2.73
2226 2485 5.460091 GGTTACCACGGTTATCGAGAAATAC 59.540 44.000 0.00 0.00 42.43 1.89
2227 2486 5.126869 TGGTTACCACGGTTATCGAGAAATA 59.873 40.000 0.00 0.00 42.43 1.40
2228 2487 4.081531 TGGTTACCACGGTTATCGAGAAAT 60.082 41.667 0.00 0.00 42.43 2.17
2229 2488 3.257873 TGGTTACCACGGTTATCGAGAAA 59.742 43.478 0.00 0.00 42.43 2.52
2230 2489 2.824936 TGGTTACCACGGTTATCGAGAA 59.175 45.455 0.00 0.00 42.43 2.87
2231 2490 2.164219 GTGGTTACCACGGTTATCGAGA 59.836 50.000 19.33 0.00 44.95 4.04
2232 2491 2.533266 GTGGTTACCACGGTTATCGAG 58.467 52.381 19.33 0.00 44.95 4.04
2233 2492 2.652941 GTGGTTACCACGGTTATCGA 57.347 50.000 19.33 0.00 44.95 3.59
2243 2502 4.324719 GGGGACTGATAAATGTGGTTACCA 60.325 45.833 0.00 0.00 0.00 3.25
2244 2503 4.204799 GGGGACTGATAAATGTGGTTACC 58.795 47.826 0.00 0.00 0.00 2.85
2245 2504 4.079958 AGGGGGACTGATAAATGTGGTTAC 60.080 45.833 0.00 0.00 0.00 2.50
2246 2505 4.116113 AGGGGGACTGATAAATGTGGTTA 58.884 43.478 0.00 0.00 0.00 2.85
2247 2506 2.926329 AGGGGGACTGATAAATGTGGTT 59.074 45.455 0.00 0.00 0.00 3.67
2248 2507 2.509964 GAGGGGGACTGATAAATGTGGT 59.490 50.000 0.00 0.00 0.00 4.16
2249 2508 2.509548 TGAGGGGGACTGATAAATGTGG 59.490 50.000 0.00 0.00 0.00 4.17
2250 2509 3.200825 ACTGAGGGGGACTGATAAATGTG 59.799 47.826 0.00 0.00 0.00 3.21
2251 2510 3.464828 ACTGAGGGGGACTGATAAATGT 58.535 45.455 0.00 0.00 0.00 2.71
2252 2511 4.510167 AACTGAGGGGGACTGATAAATG 57.490 45.455 0.00 0.00 0.00 2.32
2253 2512 6.652205 TTTAACTGAGGGGGACTGATAAAT 57.348 37.500 0.00 0.00 0.00 1.40
2254 2513 6.652205 ATTTAACTGAGGGGGACTGATAAA 57.348 37.500 0.00 0.00 0.00 1.40
2255 2514 6.652205 AATTTAACTGAGGGGGACTGATAA 57.348 37.500 0.00 0.00 0.00 1.75
2256 2515 6.100714 GGTAATTTAACTGAGGGGGACTGATA 59.899 42.308 0.00 0.00 0.00 2.15
2257 2516 5.104067 GGTAATTTAACTGAGGGGGACTGAT 60.104 44.000 0.00 0.00 0.00 2.90
2258 2517 4.226620 GGTAATTTAACTGAGGGGGACTGA 59.773 45.833 0.00 0.00 0.00 3.41
2259 2518 4.227527 AGGTAATTTAACTGAGGGGGACTG 59.772 45.833 0.00 0.00 0.00 3.51
2260 2519 4.445564 AGGTAATTTAACTGAGGGGGACT 58.554 43.478 0.00 0.00 0.00 3.85
2261 2520 4.226620 TGAGGTAATTTAACTGAGGGGGAC 59.773 45.833 0.00 0.00 0.00 4.46
2262 2521 4.440808 TGAGGTAATTTAACTGAGGGGGA 58.559 43.478 0.00 0.00 0.00 4.81
2263 2522 4.855298 TGAGGTAATTTAACTGAGGGGG 57.145 45.455 0.00 0.00 0.00 5.40
2264 2523 5.527582 CGAATGAGGTAATTTAACTGAGGGG 59.472 44.000 0.00 0.00 0.00 4.79
2265 2524 5.527582 CCGAATGAGGTAATTTAACTGAGGG 59.472 44.000 0.00 0.00 0.00 4.30
2266 2525 6.113411 ACCGAATGAGGTAATTTAACTGAGG 58.887 40.000 0.00 0.00 43.89 3.86
2278 2537 4.041938 AGGTTTTGGTTACCGAATGAGGTA 59.958 41.667 4.72 0.00 43.89 3.08
2279 2538 8.827078 TCAAGGTTTTGGTTACCGAATGAGGT 62.827 42.308 4.72 0.00 40.69 3.85
2280 2539 3.418047 AGGTTTTGGTTACCGAATGAGG 58.582 45.455 4.72 0.00 40.69 3.86
2281 2540 4.517453 TCAAGGTTTTGGTTACCGAATGAG 59.483 41.667 4.72 0.00 40.69 2.90
2282 2541 4.462133 TCAAGGTTTTGGTTACCGAATGA 58.538 39.130 4.72 3.29 40.69 2.57
2283 2542 4.839668 TCAAGGTTTTGGTTACCGAATG 57.160 40.909 4.72 0.85 40.69 2.67
2284 2543 5.321927 AGATCAAGGTTTTGGTTACCGAAT 58.678 37.500 4.72 0.00 40.69 3.34
2285 2544 4.721132 AGATCAAGGTTTTGGTTACCGAA 58.279 39.130 0.00 0.00 40.69 4.30
2286 2545 4.202377 TGAGATCAAGGTTTTGGTTACCGA 60.202 41.667 0.00 0.00 40.69 4.69
2287 2546 4.069304 TGAGATCAAGGTTTTGGTTACCG 58.931 43.478 0.00 0.00 40.69 4.02
2288 2547 6.208599 TGAATGAGATCAAGGTTTTGGTTACC 59.791 38.462 0.00 0.00 34.97 2.85
2289 2548 7.040409 ACTGAATGAGATCAAGGTTTTGGTTAC 60.040 37.037 0.00 0.00 34.97 2.50
2290 2549 7.004086 ACTGAATGAGATCAAGGTTTTGGTTA 58.996 34.615 0.00 0.00 34.97 2.85
2291 2550 5.835280 ACTGAATGAGATCAAGGTTTTGGTT 59.165 36.000 0.00 0.00 34.97 3.67
2292 2551 5.242393 CACTGAATGAGATCAAGGTTTTGGT 59.758 40.000 0.00 0.00 34.97 3.67
2293 2552 5.336213 CCACTGAATGAGATCAAGGTTTTGG 60.336 44.000 0.00 0.00 34.97 3.28
2294 2553 5.336213 CCCACTGAATGAGATCAAGGTTTTG 60.336 44.000 0.00 0.00 35.57 2.44
2295 2554 4.768968 CCCACTGAATGAGATCAAGGTTTT 59.231 41.667 0.00 0.00 0.00 2.43
2296 2555 4.338879 CCCACTGAATGAGATCAAGGTTT 58.661 43.478 0.00 0.00 0.00 3.27
2297 2556 3.308688 CCCCACTGAATGAGATCAAGGTT 60.309 47.826 0.00 0.00 0.00 3.50
2298 2557 2.240667 CCCCACTGAATGAGATCAAGGT 59.759 50.000 0.00 0.00 0.00 3.50
2299 2558 2.507058 TCCCCACTGAATGAGATCAAGG 59.493 50.000 0.00 0.00 0.00 3.61
2300 2559 3.920231 TCCCCACTGAATGAGATCAAG 57.080 47.619 0.00 0.00 0.00 3.02
2301 2560 4.868172 ATTCCCCACTGAATGAGATCAA 57.132 40.909 0.00 0.00 33.77 2.57
2302 2561 4.868172 AATTCCCCACTGAATGAGATCA 57.132 40.909 0.00 0.00 35.21 2.92
2303 2562 6.535963 AAAAATTCCCCACTGAATGAGATC 57.464 37.500 0.00 0.00 35.21 2.75
2373 2632 2.278989 TATAACGGTCTGCGCGCC 60.279 61.111 30.77 13.56 0.00 6.53
2375 2634 3.208807 CGTATAACGGTCTGCGCG 58.791 61.111 0.00 0.00 38.08 6.86
2384 2643 5.108480 GCAAAGAAGTACGATCCGTATAACG 60.108 44.000 2.48 0.00 44.12 3.18
2385 2644 5.745294 TGCAAAGAAGTACGATCCGTATAAC 59.255 40.000 2.48 0.00 44.12 1.89
2386 2645 5.893687 TGCAAAGAAGTACGATCCGTATAA 58.106 37.500 2.48 0.00 44.12 0.98
2390 2659 2.607187 CTGCAAAGAAGTACGATCCGT 58.393 47.619 0.00 0.00 44.35 4.69
2392 2661 2.093658 TCCCTGCAAAGAAGTACGATCC 60.094 50.000 0.00 0.00 0.00 3.36
2393 2662 3.247006 TCCCTGCAAAGAAGTACGATC 57.753 47.619 0.00 0.00 0.00 3.69
2397 2666 5.473504 TGAAGATTTCCCTGCAAAGAAGTAC 59.526 40.000 0.00 0.00 0.00 2.73
2400 2669 5.458041 TTGAAGATTTCCCTGCAAAGAAG 57.542 39.130 0.00 0.00 29.07 2.85
2417 2686 5.515548 TTCGACGAACTCAATCATTGAAG 57.484 39.130 6.10 0.00 39.58 3.02
2419 2688 5.915812 TTTTCGACGAACTCAATCATTGA 57.084 34.783 10.38 0.00 38.17 2.57
2451 2721 7.875041 TCTCTTTGTCAGGATTTGTTTCTAGAG 59.125 37.037 0.00 0.00 0.00 2.43
2466 2736 6.967767 GCAAATCATCTGAATCTCTTTGTCAG 59.032 38.462 0.00 0.00 40.15 3.51
2467 2737 6.127814 GGCAAATCATCTGAATCTCTTTGTCA 60.128 38.462 3.98 0.00 29.65 3.58
2468 2738 6.095160 AGGCAAATCATCTGAATCTCTTTGTC 59.905 38.462 1.47 1.47 0.00 3.18
2469 2739 5.950549 AGGCAAATCATCTGAATCTCTTTGT 59.049 36.000 5.56 0.00 0.00 2.83
2471 2741 6.127423 CCAAGGCAAATCATCTGAATCTCTTT 60.127 38.462 0.00 0.00 0.00 2.52
2472 2742 5.360144 CCAAGGCAAATCATCTGAATCTCTT 59.640 40.000 0.00 0.00 0.00 2.85
2493 2774 6.730447 TCCTGTCAAATTCAGATATTCCCAA 58.270 36.000 0.00 0.00 35.20 4.12
2496 2777 7.772757 ACTCTTCCTGTCAAATTCAGATATTCC 59.227 37.037 0.00 0.00 35.20 3.01
2501 2782 6.112058 GCTACTCTTCCTGTCAAATTCAGAT 58.888 40.000 0.00 0.00 35.20 2.90
2542 2823 0.459489 GTGGCTTGCAACTGAAACCA 59.541 50.000 0.00 0.00 0.00 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.