Multiple sequence alignment - TraesCS6A01G006600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G006600 chr6A 100.000 4611 0 0 1 4611 2720373 2715763 0.000000e+00 8516.0
1 TraesCS6A01G006600 chr6A 93.060 1974 107 11 1063 3024 3000646 3002601 0.000000e+00 2859.0
2 TraesCS6A01G006600 chr6A 89.173 1838 152 21 1329 3161 3014892 3016687 0.000000e+00 2248.0
3 TraesCS6A01G006600 chr6A 82.883 1998 285 40 1190 3165 2972088 2974050 0.000000e+00 1742.0
4 TraesCS6A01G006600 chr6A 90.090 999 61 21 501 1481 2693971 2692993 0.000000e+00 1262.0
5 TraesCS6A01G006600 chr6A 80.046 1303 225 19 1102 2399 2725417 2724145 0.000000e+00 933.0
6 TraesCS6A01G006600 chr6A 94.643 560 17 5 501 1058 3000026 3000574 0.000000e+00 856.0
7 TraesCS6A01G006600 chr6A 87.299 559 57 9 3165 3710 2974228 2974785 1.090000e-175 627.0
8 TraesCS6A01G006600 chr6A 79.931 867 161 9 1085 1940 2994621 2995485 3.920000e-175 625.0
9 TraesCS6A01G006600 chr6A 95.664 369 15 1 142 509 2999381 2999749 3.970000e-165 592.0
10 TraesCS6A01G006600 chr6A 87.891 479 49 7 3203 3677 3016906 3017379 5.210000e-154 555.0
11 TraesCS6A01G006600 chr6A 89.104 413 35 7 3203 3606 3002594 3003005 5.320000e-139 505.0
12 TraesCS6A01G006600 chr6A 89.344 366 16 11 145 509 2694752 2694409 5.480000e-119 438.0
13 TraesCS6A01G006600 chr6A 84.921 252 20 7 735 979 2994164 2994404 5.960000e-59 239.0
14 TraesCS6A01G006600 chr6A 95.862 145 6 0 1 145 2999211 2999355 7.710000e-58 235.0
15 TraesCS6A01G006600 chr6A 91.228 171 15 0 3348 3518 2692437 2692267 2.770000e-57 233.0
16 TraesCS6A01G006600 chr6A 93.793 145 4 1 1 145 2694924 2694785 3.610000e-51 213.0
17 TraesCS6A01G006600 chr6A 77.090 323 44 18 747 1061 3014004 3014304 4.780000e-35 159.0
18 TraesCS6A01G006600 chr6A 90.769 65 2 3 3725 3788 2716582 2716521 2.960000e-12 84.2
19 TraesCS6A01G006600 chr6A 90.769 65 2 3 3792 3853 2716649 2716586 2.960000e-12 84.2
20 TraesCS6A01G006600 chr6A 92.593 54 2 2 933 984 2725519 2725466 4.950000e-10 76.8
21 TraesCS6A01G006600 chr6A 95.122 41 2 0 1071 1111 2719215 2719175 1.070000e-06 65.8
22 TraesCS6A01G006600 chr6A 91.111 45 4 0 3618 3662 2716708 2716664 1.390000e-05 62.1
23 TraesCS6A01G006600 chr6A 91.111 45 4 0 3666 3710 2716756 2716712 1.390000e-05 62.1
24 TraesCS6A01G006600 chr6B 93.483 2670 127 25 501 3137 7902950 7900295 0.000000e+00 3923.0
25 TraesCS6A01G006600 chr6B 94.352 1204 58 7 1723 2922 8423432 8424629 0.000000e+00 1838.0
26 TraesCS6A01G006600 chr6B 82.609 1403 220 16 1173 2572 7307391 7306010 0.000000e+00 1218.0
27 TraesCS6A01G006600 chr6B 79.487 1482 250 40 1429 2882 7824113 7822658 0.000000e+00 1003.0
28 TraesCS6A01G006600 chr6B 89.733 487 22 8 3307 3791 7900299 7899839 8.540000e-167 597.0
29 TraesCS6A01G006600 chr6B 84.211 532 52 14 3203 3710 8424953 8425476 5.360000e-134 488.0
30 TraesCS6A01G006600 chr6B 84.068 295 7 7 4154 4426 7899742 7899466 9.910000e-62 248.0
31 TraesCS6A01G006600 chr6B 89.535 172 11 5 3786 3951 7899909 7899739 1.300000e-50 211.0
32 TraesCS6A01G006600 chr6B 81.923 260 24 11 4358 4611 7899384 7899142 1.010000e-46 198.0
33 TraesCS6A01G006600 chr6B 91.608 143 11 1 1 142 8421453 8421595 3.640000e-46 196.0
34 TraesCS6A01G006600 chr6B 81.429 140 15 6 917 1046 7307604 7307466 2.270000e-18 104.0
35 TraesCS6A01G006600 chr6B 92.958 71 3 1 4358 4426 7899460 7899390 8.160000e-18 102.0
36 TraesCS6A01G006600 chr6D 92.505 2655 154 21 1063 3710 4267665 4265049 0.000000e+00 3759.0
37 TraesCS6A01G006600 chr6D 97.602 2002 42 5 1167 3164 4646815 4648814 0.000000e+00 3426.0
38 TraesCS6A01G006600 chr6D 82.493 1725 230 46 1422 3134 4637952 4639616 0.000000e+00 1447.0
39 TraesCS6A01G006600 chr6D 82.974 1392 204 20 1173 2561 4698382 4699743 0.000000e+00 1227.0
40 TraesCS6A01G006600 chr6D 96.166 652 19 5 518 1168 4646044 4646690 0.000000e+00 1061.0
41 TraesCS6A01G006600 chr6D 94.973 557 9 12 566 1105 4268233 4267679 0.000000e+00 856.0
42 TraesCS6A01G006600 chr6D 90.215 511 32 8 1 509 4269279 4268785 0.000000e+00 651.0
43 TraesCS6A01G006600 chr6D 83.633 611 70 17 2556 3145 4699824 4700425 8.720000e-152 547.0
44 TraesCS6A01G006600 chr6D 96.578 263 8 1 3165 3426 4649011 4649273 7.080000e-118 435.0
45 TraesCS6A01G006600 chr6D 86.000 350 47 2 1092 1439 4642207 4642556 1.570000e-99 374.0
46 TraesCS6A01G006600 chr6D 96.528 144 4 1 1 143 4645450 4645593 2.140000e-58 237.0
47 TraesCS6A01G006600 chr6D 77.838 370 61 17 3619 3981 4265092 4264737 4.670000e-50 209.0
48 TraesCS6A01G006600 chr6D 81.538 195 21 6 4125 4304 4264119 4263925 3.720000e-31 147.0
49 TraesCS6A01G006600 chr6D 82.081 173 13 11 687 843 4056626 4056456 1.040000e-26 132.0
50 TraesCS6A01G006600 chr6D 100.000 35 0 0 3345 3379 4286073 4286039 1.070000e-06 65.8
51 TraesCS6A01G006600 chrUn 83.248 1964 270 33 1173 3109 71058283 71056352 0.000000e+00 1749.0
52 TraesCS6A01G006600 chr3A 84.551 479 61 9 2671 3145 731404096 731404565 3.250000e-126 462.0
53 TraesCS6A01G006600 chr3A 84.551 479 61 9 2671 3145 731447654 731448123 3.250000e-126 462.0
54 TraesCS6A01G006600 chr2D 90.029 341 26 4 145 485 358180763 358180431 7.080000e-118 435.0
55 TraesCS6A01G006600 chr2D 76.235 324 64 9 141 462 324038762 324038450 4.780000e-35 159.0
56 TraesCS6A01G006600 chr1A 89.459 351 28 5 142 492 62252603 62252944 7.080000e-118 435.0
57 TraesCS6A01G006600 chr3B 89.736 341 27 4 145 485 526676341 526676009 3.300000e-116 429.0
58 TraesCS6A01G006600 chr2B 89.181 342 28 5 145 485 37798160 37797827 7.140000e-113 418.0
59 TraesCS6A01G006600 chr4B 87.209 344 33 5 142 485 619760924 619761256 9.360000e-102 381.0
60 TraesCS6A01G006600 chr4B 80.556 252 34 9 239 485 651909211 651908970 3.670000e-41 180.0
61 TraesCS6A01G006600 chr7D 84.257 343 36 13 157 493 157681606 157681936 7.440000e-83 318.0
62 TraesCS6A01G006600 chr7D 77.500 360 52 19 3619 3962 633366866 633366520 6.090000e-44 189.0
63 TraesCS6A01G006600 chr5D 76.471 255 45 9 240 489 214323688 214323444 1.740000e-24 124.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G006600 chr6A 2715763 2720373 4610 True 1479.066667 8516 93.147000 1 4611 6 chr6A.!!$R2 4610
1 TraesCS6A01G006600 chr6A 2972088 2974785 2697 False 1184.500000 1742 85.091000 1190 3710 2 chr6A.!!$F1 2520
2 TraesCS6A01G006600 chr6A 3014004 3017379 3375 False 987.333333 2248 84.718000 747 3677 3 chr6A.!!$F3 2930
3 TraesCS6A01G006600 chr6A 2994164 3003005 8841 False 844.428571 2859 90.455000 1 3606 7 chr6A.!!$F2 3605
4 TraesCS6A01G006600 chr6A 2692267 2694924 2657 True 536.500000 1262 91.113750 1 3518 4 chr6A.!!$R1 3517
5 TraesCS6A01G006600 chr6A 2724145 2725519 1374 True 504.900000 933 86.319500 933 2399 2 chr6A.!!$R3 1466
6 TraesCS6A01G006600 chr6B 7822658 7824113 1455 True 1003.000000 1003 79.487000 1429 2882 1 chr6B.!!$R1 1453
7 TraesCS6A01G006600 chr6B 7899142 7902950 3808 True 879.833333 3923 88.616667 501 4611 6 chr6B.!!$R3 4110
8 TraesCS6A01G006600 chr6B 8421453 8425476 4023 False 840.666667 1838 90.057000 1 3710 3 chr6B.!!$F1 3709
9 TraesCS6A01G006600 chr6B 7306010 7307604 1594 True 661.000000 1218 82.019000 917 2572 2 chr6B.!!$R2 1655
10 TraesCS6A01G006600 chr6D 4637952 4649273 11321 False 1163.333333 3426 92.561167 1 3426 6 chr6D.!!$F1 3425
11 TraesCS6A01G006600 chr6D 4263925 4269279 5354 True 1124.400000 3759 87.413800 1 4304 5 chr6D.!!$R3 4303
12 TraesCS6A01G006600 chr6D 4698382 4700425 2043 False 887.000000 1227 83.303500 1173 3145 2 chr6D.!!$F2 1972
13 TraesCS6A01G006600 chrUn 71056352 71058283 1931 True 1749.000000 1749 83.248000 1173 3109 1 chrUn.!!$R1 1936

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
867 11274 2.969262 CCTCTCCCTCTCCATCTAAACC 59.031 54.545 0.00 0.00 0.00 3.27 F
1721 12969 2.125552 CCGGTGAAGAGCGCATCA 60.126 61.111 11.47 8.46 41.86 3.07 F
2517 13776 3.363280 CGTTCCAGTTACTTTTGGTACGC 60.363 47.826 9.17 0.00 46.16 4.42 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2517 13776 1.602191 GAACAACGTTGCCGCAATAG 58.398 50.0 27.61 9.31 37.70 1.73 R
2681 14060 1.679559 GCCTTTAGCAATGGCCAGGG 61.680 60.0 13.05 6.85 43.79 4.45 R
4097 16636 0.031178 GTCAGCAGGCAACCAAGTTG 59.969 55.0 3.09 3.09 45.24 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
114 9530 6.078456 TGGTGGTAGATCAATTGGAAGAAT 57.922 37.500 5.42 0.00 0.00 2.40
221 9670 7.233348 ACTCCAATTAGCAATTTTCTTCAGGAA 59.767 33.333 0.00 0.00 0.00 3.36
231 9680 7.168804 GCAATTTTCTTCAGGAAACTTCTTCTG 59.831 37.037 0.00 0.00 42.80 3.02
241 9690 4.443598 GGAAACTTCTTCTGTCCAGACTGT 60.444 45.833 0.93 0.00 37.14 3.55
255 9704 6.429692 TGTCCAGACTGTTGTTTACCATATTG 59.570 38.462 0.93 0.00 0.00 1.90
256 9705 5.943416 TCCAGACTGTTGTTTACCATATTGG 59.057 40.000 0.93 0.00 45.02 3.16
332 9781 3.020984 AGTAGACTCTGTCCTTAGCTGC 58.979 50.000 0.00 0.00 32.18 5.25
867 11274 2.969262 CCTCTCCCTCTCCATCTAAACC 59.031 54.545 0.00 0.00 0.00 3.27
1149 11716 8.877864 AAACCACCAGATTCATTATTACTTGA 57.122 30.769 0.00 0.00 0.00 3.02
1494 12742 2.594303 CTTCCGCAAGCACCACCA 60.594 61.111 0.00 0.00 0.00 4.17
1615 12863 3.181461 CCAAGAGCAGAATACCCTACCAG 60.181 52.174 0.00 0.00 0.00 4.00
1625 12873 5.970640 AGAATACCCTACCAGGAAGATGAAA 59.029 40.000 0.00 0.00 37.67 2.69
1721 12969 2.125552 CCGGTGAAGAGCGCATCA 60.126 61.111 11.47 8.46 41.86 3.07
2057 13314 8.728833 TGTTTGATTTCAAAATGCAAAGTCTTT 58.271 25.926 7.28 0.00 46.08 2.52
2063 13320 4.805192 TCAAAATGCAAAGTCTTTGTCTGC 59.195 37.500 23.07 12.48 42.56 4.26
2517 13776 3.363280 CGTTCCAGTTACTTTTGGTACGC 60.363 47.826 9.17 0.00 46.16 4.42
2717 14096 9.184523 TGCTAAAGGCTAAATACAATTATGTGT 57.815 29.630 0.00 0.00 40.14 3.72
3200 14808 3.433598 GCATGCCTTTGGGTAGAGATACA 60.434 47.826 6.36 0.00 34.45 2.29
3209 14817 4.780815 TGGGTAGAGATACAAGCCATTTG 58.219 43.478 0.00 0.00 42.68 2.32
3224 14835 2.886523 CCATTTGTCCTTTGTCTGAGCA 59.113 45.455 0.00 0.00 0.00 4.26
3332 14953 4.859798 GTGAGTCACCGATCTCTTAGTTTG 59.140 45.833 12.54 0.00 0.00 2.93
3333 14954 4.765339 TGAGTCACCGATCTCTTAGTTTGA 59.235 41.667 0.00 0.00 0.00 2.69
3482 15371 5.596836 TTCAGCTTTGGACATTTTCTGTT 57.403 34.783 0.00 0.00 38.54 3.16
3492 15381 6.680810 TGGACATTTTCTGTTTAATCTGCAG 58.319 36.000 7.63 7.63 38.54 4.41
3529 15419 6.670695 ATGCTTATTTTTGGGGATCATACC 57.329 37.500 0.00 0.00 0.00 2.73
3542 15432 6.043706 TGGGGATCATACCAAATTTGTTTTGT 59.956 34.615 16.73 9.73 42.68 2.83
3656 15553 0.179081 GCTAGTTGGCGTAGGGAAGG 60.179 60.000 0.00 0.00 0.00 3.46
3698 15596 1.379527 GCCATGGCTAGTTGGTGTAC 58.620 55.000 29.98 0.00 38.26 2.90
3723 15667 6.403049 TGAAGTTCTTCAAACTGTGTGTCTA 58.597 36.000 12.08 0.00 0.00 2.59
3786 15737 3.181499 GGTTGATGCTGAGATTGCTCTTG 60.181 47.826 0.00 0.00 41.84 3.02
3797 15748 7.465245 GCTGAGATTGCTCTTGTATGTAGTTTC 60.465 40.741 0.00 0.00 41.84 2.78
3799 15750 8.097038 TGAGATTGCTCTTGTATGTAGTTTCTT 58.903 33.333 0.00 0.00 41.84 2.52
3800 15751 8.485976 AGATTGCTCTTGTATGTAGTTTCTTC 57.514 34.615 0.00 0.00 0.00 2.87
3801 15752 8.317679 AGATTGCTCTTGTATGTAGTTTCTTCT 58.682 33.333 0.00 0.00 0.00 2.85
3802 15753 9.587772 GATTGCTCTTGTATGTAGTTTCTTCTA 57.412 33.333 0.00 0.00 0.00 2.10
3804 15755 9.944376 TTGCTCTTGTATGTAGTTTCTTCTATT 57.056 29.630 0.00 0.00 0.00 1.73
3805 15756 9.371136 TGCTCTTGTATGTAGTTTCTTCTATTG 57.629 33.333 0.00 0.00 0.00 1.90
3813 15764 7.843490 TGTAGTTTCTTCTATTGTGTATGCC 57.157 36.000 0.00 0.00 0.00 4.40
3814 15765 6.533723 TGTAGTTTCTTCTATTGTGTATGCCG 59.466 38.462 0.00 0.00 0.00 5.69
3815 15766 4.876107 AGTTTCTTCTATTGTGTATGCCGG 59.124 41.667 0.00 0.00 0.00 6.13
3818 15769 2.613026 TCTATTGTGTATGCCGGTGG 57.387 50.000 1.90 0.00 0.00 4.61
3829 15780 3.879682 CCGGTGGCATGCGATGTG 61.880 66.667 12.44 1.77 0.00 3.21
3830 15781 3.879682 CGGTGGCATGCGATGTGG 61.880 66.667 12.44 0.00 0.00 4.17
3831 15782 2.751436 GGTGGCATGCGATGTGGT 60.751 61.111 12.44 0.00 0.00 4.16
3832 15783 2.342650 GGTGGCATGCGATGTGGTT 61.343 57.895 12.44 0.00 0.00 3.67
3834 15785 1.303155 TGGCATGCGATGTGGTTGA 60.303 52.632 12.44 0.00 0.00 3.18
3836 15787 0.248743 GGCATGCGATGTGGTTGATG 60.249 55.000 12.44 0.00 0.00 3.07
3837 15788 0.868602 GCATGCGATGTGGTTGATGC 60.869 55.000 0.00 0.00 0.00 3.91
3838 15789 0.736636 CATGCGATGTGGTTGATGCT 59.263 50.000 0.00 0.00 0.00 3.79
3839 15790 0.736636 ATGCGATGTGGTTGATGCTG 59.263 50.000 0.00 0.00 0.00 4.41
3840 15791 0.321475 TGCGATGTGGTTGATGCTGA 60.321 50.000 0.00 0.00 0.00 4.26
3841 15792 0.376152 GCGATGTGGTTGATGCTGAG 59.624 55.000 0.00 0.00 0.00 3.35
3842 15793 2.008543 GCGATGTGGTTGATGCTGAGA 61.009 52.381 0.00 0.00 0.00 3.27
3843 15794 1.662629 CGATGTGGTTGATGCTGAGAC 59.337 52.381 0.00 0.00 0.00 3.36
3844 15795 2.676176 CGATGTGGTTGATGCTGAGACT 60.676 50.000 0.00 0.00 0.00 3.24
3845 15796 2.936919 TGTGGTTGATGCTGAGACTT 57.063 45.000 0.00 0.00 0.00 3.01
3846 15797 2.497138 TGTGGTTGATGCTGAGACTTG 58.503 47.619 0.00 0.00 0.00 3.16
3847 15798 2.158769 TGTGGTTGATGCTGAGACTTGT 60.159 45.455 0.00 0.00 0.00 3.16
3848 15799 2.481952 GTGGTTGATGCTGAGACTTGTC 59.518 50.000 0.00 0.00 0.00 3.18
3849 15800 1.728971 GGTTGATGCTGAGACTTGTCG 59.271 52.381 0.00 0.00 0.00 4.35
3925 15876 0.456221 CTGGTTAGCGACTCGTGGAT 59.544 55.000 0.00 0.00 0.00 3.41
3935 15886 1.244019 ACTCGTGGATTTGCTTGGGC 61.244 55.000 0.00 0.00 39.26 5.36
3947 15898 0.964358 GCTTGGGCTGATGCTTGACT 60.964 55.000 0.00 0.00 39.59 3.41
3950 15901 0.035725 TGGGCTGATGCTTGACTCTG 60.036 55.000 0.00 0.00 39.59 3.35
3971 15922 1.212688 TGATGTAAGGTGGATGGGCAG 59.787 52.381 0.00 0.00 0.00 4.85
3978 15929 0.681243 GGTGGATGGGCAGGAAGAAC 60.681 60.000 0.00 0.00 0.00 3.01
3981 15932 2.173569 GTGGATGGGCAGGAAGAACTAT 59.826 50.000 0.00 0.00 0.00 2.12
3983 15934 4.044308 TGGATGGGCAGGAAGAACTATTA 58.956 43.478 0.00 0.00 0.00 0.98
3985 15936 5.221925 TGGATGGGCAGGAAGAACTATTATC 60.222 44.000 0.00 0.00 0.00 1.75
3989 16528 7.067496 TGGGCAGGAAGAACTATTATCTTAG 57.933 40.000 0.00 0.00 37.26 2.18
3992 16531 7.164803 GGCAGGAAGAACTATTATCTTAGCAT 58.835 38.462 0.00 0.00 37.26 3.79
3995 16534 9.553064 CAGGAAGAACTATTATCTTAGCATGTT 57.447 33.333 0.00 0.00 37.26 2.71
4011 16550 4.811024 AGCATGTTACATAGTTGGTCGATG 59.189 41.667 0.00 0.00 35.72 3.84
4012 16551 4.808895 GCATGTTACATAGTTGGTCGATGA 59.191 41.667 0.00 0.00 34.17 2.92
4013 16552 5.293324 GCATGTTACATAGTTGGTCGATGAA 59.707 40.000 0.00 0.00 34.17 2.57
4014 16553 6.017934 GCATGTTACATAGTTGGTCGATGAAT 60.018 38.462 0.00 0.00 34.17 2.57
4015 16554 7.567571 CATGTTACATAGTTGGTCGATGAATC 58.432 38.462 0.00 0.00 34.17 2.52
4016 16555 6.046593 TGTTACATAGTTGGTCGATGAATCC 58.953 40.000 0.00 0.00 34.17 3.01
4017 16556 4.073293 ACATAGTTGGTCGATGAATCCC 57.927 45.455 0.00 0.00 34.17 3.85
4018 16557 3.181454 ACATAGTTGGTCGATGAATCCCC 60.181 47.826 0.00 0.00 34.17 4.81
4019 16558 1.584724 AGTTGGTCGATGAATCCCCT 58.415 50.000 0.00 0.00 0.00 4.79
4020 16559 1.210478 AGTTGGTCGATGAATCCCCTG 59.790 52.381 0.00 0.00 0.00 4.45
4021 16560 0.107214 TTGGTCGATGAATCCCCTGC 60.107 55.000 0.00 0.00 0.00 4.85
4022 16561 0.982852 TGGTCGATGAATCCCCTGCT 60.983 55.000 0.00 0.00 0.00 4.24
4023 16562 1.048601 GGTCGATGAATCCCCTGCTA 58.951 55.000 0.00 0.00 0.00 3.49
4024 16563 1.270358 GGTCGATGAATCCCCTGCTAC 60.270 57.143 0.00 0.00 0.00 3.58
4025 16564 1.412710 GTCGATGAATCCCCTGCTACA 59.587 52.381 0.00 0.00 0.00 2.74
4026 16565 1.688735 TCGATGAATCCCCTGCTACAG 59.311 52.381 0.00 0.00 0.00 2.74
4027 16566 1.875576 CGATGAATCCCCTGCTACAGC 60.876 57.143 0.00 0.00 42.50 4.40
4028 16567 0.475906 ATGAATCCCCTGCTACAGCC 59.524 55.000 0.00 0.00 41.18 4.85
4029 16568 0.913934 TGAATCCCCTGCTACAGCCA 60.914 55.000 0.00 0.00 41.18 4.75
4030 16569 0.179034 GAATCCCCTGCTACAGCCAG 60.179 60.000 0.00 0.00 41.18 4.85
4031 16570 2.276309 AATCCCCTGCTACAGCCAGC 62.276 60.000 0.00 0.00 42.15 4.85
4036 16575 4.948257 TGCTACAGCCAGCAGATG 57.052 55.556 1.37 0.00 46.41 2.90
4047 16586 3.582998 CCAGCAGATGGGATAAAGGAA 57.417 47.619 0.00 0.00 46.36 3.36
4048 16587 3.902218 CCAGCAGATGGGATAAAGGAAA 58.098 45.455 0.00 0.00 46.36 3.13
4049 16588 4.280819 CCAGCAGATGGGATAAAGGAAAA 58.719 43.478 0.00 0.00 46.36 2.29
4050 16589 4.340381 CCAGCAGATGGGATAAAGGAAAAG 59.660 45.833 0.00 0.00 46.36 2.27
4051 16590 5.195940 CAGCAGATGGGATAAAGGAAAAGA 58.804 41.667 0.00 0.00 0.00 2.52
4052 16591 5.832060 CAGCAGATGGGATAAAGGAAAAGAT 59.168 40.000 0.00 0.00 0.00 2.40
4053 16592 5.832060 AGCAGATGGGATAAAGGAAAAGATG 59.168 40.000 0.00 0.00 0.00 2.90
4054 16593 5.829924 GCAGATGGGATAAAGGAAAAGATGA 59.170 40.000 0.00 0.00 0.00 2.92
4055 16594 6.492772 GCAGATGGGATAAAGGAAAAGATGAT 59.507 38.462 0.00 0.00 0.00 2.45
4056 16595 7.015001 GCAGATGGGATAAAGGAAAAGATGATT 59.985 37.037 0.00 0.00 0.00 2.57
4057 16596 9.578576 CAGATGGGATAAAGGAAAAGATGATTA 57.421 33.333 0.00 0.00 0.00 1.75
4058 16597 9.579932 AGATGGGATAAAGGAAAAGATGATTAC 57.420 33.333 0.00 0.00 0.00 1.89
4059 16598 9.354673 GATGGGATAAAGGAAAAGATGATTACA 57.645 33.333 0.00 0.00 0.00 2.41
4060 16599 9.713684 ATGGGATAAAGGAAAAGATGATTACAA 57.286 29.630 0.00 0.00 0.00 2.41
4061 16600 9.189156 TGGGATAAAGGAAAAGATGATTACAAG 57.811 33.333 0.00 0.00 0.00 3.16
4062 16601 8.633561 GGGATAAAGGAAAAGATGATTACAAGG 58.366 37.037 0.00 0.00 0.00 3.61
4063 16602 9.190317 GGATAAAGGAAAAGATGATTACAAGGT 57.810 33.333 0.00 0.00 0.00 3.50
4066 16605 8.477419 AAAGGAAAAGATGATTACAAGGTTCA 57.523 30.769 0.00 0.00 0.00 3.18
4067 16606 7.454260 AGGAAAAGATGATTACAAGGTTCAC 57.546 36.000 0.00 0.00 0.00 3.18
4068 16607 7.004086 AGGAAAAGATGATTACAAGGTTCACA 58.996 34.615 0.00 0.00 0.00 3.58
4069 16608 7.505585 AGGAAAAGATGATTACAAGGTTCACAA 59.494 33.333 0.00 0.00 0.00 3.33
4070 16609 8.141268 GGAAAAGATGATTACAAGGTTCACAAA 58.859 33.333 0.00 0.00 0.00 2.83
4071 16610 9.528018 GAAAAGATGATTACAAGGTTCACAAAA 57.472 29.630 0.00 0.00 0.00 2.44
4072 16611 8.871686 AAAGATGATTACAAGGTTCACAAAAC 57.128 30.769 0.00 0.00 0.00 2.43
4073 16612 6.981722 AGATGATTACAAGGTTCACAAAACC 58.018 36.000 0.00 0.00 40.58 3.27
4074 16613 5.523438 TGATTACAAGGTTCACAAAACCC 57.477 39.130 3.39 0.00 41.18 4.11
4075 16614 4.956700 TGATTACAAGGTTCACAAAACCCA 59.043 37.500 3.39 0.00 41.18 4.51
4076 16615 5.600484 TGATTACAAGGTTCACAAAACCCAT 59.400 36.000 3.39 0.00 41.18 4.00
4077 16616 5.941555 TTACAAGGTTCACAAAACCCATT 57.058 34.783 3.39 0.00 41.18 3.16
4078 16617 4.400529 ACAAGGTTCACAAAACCCATTC 57.599 40.909 3.39 0.00 41.18 2.67
4079 16618 3.772025 ACAAGGTTCACAAAACCCATTCA 59.228 39.130 3.39 0.00 41.18 2.57
4080 16619 4.119136 CAAGGTTCACAAAACCCATTCAC 58.881 43.478 3.39 0.00 41.18 3.18
4081 16620 3.370104 AGGTTCACAAAACCCATTCACA 58.630 40.909 3.39 0.00 41.18 3.58
4082 16621 3.384467 AGGTTCACAAAACCCATTCACAG 59.616 43.478 3.39 0.00 41.18 3.66
4083 16622 3.123050 GTTCACAAAACCCATTCACAGC 58.877 45.455 0.00 0.00 0.00 4.40
4084 16623 1.686052 TCACAAAACCCATTCACAGCC 59.314 47.619 0.00 0.00 0.00 4.85
4085 16624 1.688197 CACAAAACCCATTCACAGCCT 59.312 47.619 0.00 0.00 0.00 4.58
4086 16625 1.688197 ACAAAACCCATTCACAGCCTG 59.312 47.619 0.00 0.00 0.00 4.85
4087 16626 0.681175 AAAACCCATTCACAGCCTGC 59.319 50.000 0.00 0.00 0.00 4.85
4088 16627 0.469705 AAACCCATTCACAGCCTGCA 60.470 50.000 0.00 0.00 0.00 4.41
4089 16628 0.469705 AACCCATTCACAGCCTGCAA 60.470 50.000 0.00 0.00 0.00 4.08
4090 16629 0.896940 ACCCATTCACAGCCTGCAAG 60.897 55.000 0.00 0.00 0.00 4.01
4091 16630 1.214589 CCATTCACAGCCTGCAAGC 59.785 57.895 0.00 0.00 0.00 4.01
4092 16631 1.214589 CATTCACAGCCTGCAAGCC 59.785 57.895 3.00 0.00 0.00 4.35
4093 16632 1.980772 ATTCACAGCCTGCAAGCCC 60.981 57.895 3.00 0.00 0.00 5.19
4094 16633 2.718487 ATTCACAGCCTGCAAGCCCA 62.718 55.000 3.00 0.00 0.00 5.36
4095 16634 2.678934 CACAGCCTGCAAGCCCAT 60.679 61.111 3.00 0.00 0.00 4.00
4096 16635 2.118951 ACAGCCTGCAAGCCCATT 59.881 55.556 3.00 0.00 0.00 3.16
4097 16636 1.980772 ACAGCCTGCAAGCCCATTC 60.981 57.895 3.00 0.00 0.00 2.67
4098 16637 1.980232 CAGCCTGCAAGCCCATTCA 60.980 57.895 3.00 0.00 0.00 2.57
4099 16638 1.228956 AGCCTGCAAGCCCATTCAA 60.229 52.632 3.00 0.00 0.00 2.69
4100 16639 1.079612 GCCTGCAAGCCCATTCAAC 60.080 57.895 0.00 0.00 0.00 3.18
4101 16640 1.538687 GCCTGCAAGCCCATTCAACT 61.539 55.000 0.00 0.00 0.00 3.16
4102 16641 0.971386 CCTGCAAGCCCATTCAACTT 59.029 50.000 0.00 0.00 0.00 2.66
4103 16642 1.337447 CCTGCAAGCCCATTCAACTTG 60.337 52.381 0.00 0.00 42.90 3.16
4104 16643 0.680618 TGCAAGCCCATTCAACTTGG 59.319 50.000 0.00 0.00 40.87 3.61
4105 16644 0.681175 GCAAGCCCATTCAACTTGGT 59.319 50.000 0.00 0.00 40.87 3.67
4106 16645 1.070601 GCAAGCCCATTCAACTTGGTT 59.929 47.619 0.00 0.00 40.87 3.67
4107 16646 2.758009 CAAGCCCATTCAACTTGGTTG 58.242 47.619 4.25 4.25 43.99 3.77
4108 16647 0.681175 AGCCCATTCAACTTGGTTGC 59.319 50.000 5.63 0.00 42.55 4.17
4109 16648 0.320683 GCCCATTCAACTTGGTTGCC 60.321 55.000 5.63 0.00 42.55 4.52
4110 16649 1.341080 CCCATTCAACTTGGTTGCCT 58.659 50.000 5.63 0.00 42.55 4.75
4111 16650 1.001181 CCCATTCAACTTGGTTGCCTG 59.999 52.381 5.63 5.62 42.55 4.85
4112 16651 1.606224 CCATTCAACTTGGTTGCCTGC 60.606 52.381 5.63 0.00 42.55 4.85
4113 16652 1.342174 CATTCAACTTGGTTGCCTGCT 59.658 47.619 5.63 0.00 42.55 4.24
4114 16653 0.746063 TTCAACTTGGTTGCCTGCTG 59.254 50.000 5.63 0.00 42.55 4.41
4115 16654 0.106769 TCAACTTGGTTGCCTGCTGA 60.107 50.000 5.63 0.00 42.55 4.26
4116 16655 0.031178 CAACTTGGTTGCCTGCTGAC 59.969 55.000 0.00 0.00 36.73 3.51
4117 16656 0.106519 AACTTGGTTGCCTGCTGACT 60.107 50.000 0.00 0.00 0.00 3.41
4118 16657 0.764890 ACTTGGTTGCCTGCTGACTA 59.235 50.000 0.00 0.00 0.00 2.59
4119 16658 1.271054 ACTTGGTTGCCTGCTGACTAG 60.271 52.381 0.00 0.00 0.00 2.57
4120 16659 0.764890 TTGGTTGCCTGCTGACTAGT 59.235 50.000 0.00 0.00 0.00 2.57
4121 16660 1.639722 TGGTTGCCTGCTGACTAGTA 58.360 50.000 0.00 0.00 0.00 1.82
4122 16661 1.275291 TGGTTGCCTGCTGACTAGTAC 59.725 52.381 0.00 0.00 0.00 2.73
4123 16662 1.550976 GGTTGCCTGCTGACTAGTACT 59.449 52.381 0.00 0.00 0.00 2.73
4124 16663 2.028020 GGTTGCCTGCTGACTAGTACTT 60.028 50.000 0.00 0.00 0.00 2.24
4129 16668 3.428316 GCCTGCTGACTAGTACTTGACTC 60.428 52.174 11.43 0.05 39.81 3.36
4146 16685 0.815615 CTCCAATTCAGCTACGCCCC 60.816 60.000 0.00 0.00 0.00 5.80
4150 16689 2.893682 AATTCAGCTACGCCCCCTGC 62.894 60.000 0.00 0.00 0.00 4.85
4288 16864 3.822167 GGTTCCTGTTTCGGATTTACCAA 59.178 43.478 0.00 0.00 38.90 3.67
4329 16905 5.536161 CCAAGAGATTCTTCAGGGAAAACAA 59.464 40.000 0.00 0.00 33.78 2.83
4341 16917 6.112058 TCAGGGAAAACAAAACCAATTTCTG 58.888 36.000 0.00 0.00 33.42 3.02
4357 16933 4.870069 TGGCCAACCATTCATGCT 57.130 50.000 0.61 0.00 42.67 3.79
4358 16934 3.070115 TGGCCAACCATTCATGCTT 57.930 47.368 0.61 0.00 42.67 3.91
4359 16935 0.896923 TGGCCAACCATTCATGCTTC 59.103 50.000 0.61 0.00 42.67 3.86
4360 16936 0.896923 GGCCAACCATTCATGCTTCA 59.103 50.000 0.00 0.00 35.26 3.02
4428 17156 7.076842 AGTGTTACATTACTCATGAATGTGC 57.923 36.000 17.88 12.29 45.02 4.57
4430 17158 6.963242 GTGTTACATTACTCATGAATGTGCTG 59.037 38.462 17.88 8.65 45.02 4.41
4431 17159 4.627611 ACATTACTCATGAATGTGCTGC 57.372 40.909 10.10 0.00 44.03 5.25
4432 17160 4.011698 ACATTACTCATGAATGTGCTGCA 58.988 39.130 10.10 0.00 44.03 4.41
4433 17161 4.095932 ACATTACTCATGAATGTGCTGCAG 59.904 41.667 10.11 10.11 44.03 4.41
4434 17162 2.195741 ACTCATGAATGTGCTGCAGT 57.804 45.000 16.64 0.00 0.00 4.40
4435 17163 2.511659 ACTCATGAATGTGCTGCAGTT 58.488 42.857 16.64 0.51 0.00 3.16
4436 17164 2.486982 ACTCATGAATGTGCTGCAGTTC 59.513 45.455 16.64 16.52 0.00 3.01
4437 17165 1.465777 TCATGAATGTGCTGCAGTTCG 59.534 47.619 16.64 8.69 0.00 3.95
4438 17166 1.465777 CATGAATGTGCTGCAGTTCGA 59.534 47.619 16.64 10.52 0.00 3.71
4439 17167 1.592064 TGAATGTGCTGCAGTTCGAA 58.408 45.000 16.64 0.00 0.00 3.71
4440 17168 1.532437 TGAATGTGCTGCAGTTCGAAG 59.468 47.619 16.64 0.00 0.00 3.79
4441 17169 0.239347 AATGTGCTGCAGTTCGAAGC 59.761 50.000 16.64 0.00 37.46 3.86
4442 17170 1.580845 ATGTGCTGCAGTTCGAAGCC 61.581 55.000 16.64 0.00 36.05 4.35
4443 17171 1.963338 GTGCTGCAGTTCGAAGCCT 60.963 57.895 16.64 0.00 36.05 4.58
4444 17172 1.227943 TGCTGCAGTTCGAAGCCTT 60.228 52.632 16.64 0.00 36.05 4.35
4445 17173 0.819259 TGCTGCAGTTCGAAGCCTTT 60.819 50.000 16.64 0.00 36.05 3.11
4446 17174 0.312102 GCTGCAGTTCGAAGCCTTTT 59.688 50.000 16.64 0.00 0.00 2.27
4447 17175 1.535462 GCTGCAGTTCGAAGCCTTTTA 59.465 47.619 16.64 0.00 0.00 1.52
4448 17176 2.031157 GCTGCAGTTCGAAGCCTTTTAA 60.031 45.455 16.64 0.00 0.00 1.52
4449 17177 3.814945 CTGCAGTTCGAAGCCTTTTAAG 58.185 45.455 5.25 0.00 0.00 1.85
4450 17178 3.211045 TGCAGTTCGAAGCCTTTTAAGT 58.789 40.909 0.00 0.00 0.00 2.24
4451 17179 4.382291 TGCAGTTCGAAGCCTTTTAAGTA 58.618 39.130 0.00 0.00 0.00 2.24
4452 17180 5.001232 TGCAGTTCGAAGCCTTTTAAGTAT 58.999 37.500 0.00 0.00 0.00 2.12
4453 17181 5.472137 TGCAGTTCGAAGCCTTTTAAGTATT 59.528 36.000 0.00 0.00 0.00 1.89
4454 17182 6.022208 GCAGTTCGAAGCCTTTTAAGTATTC 58.978 40.000 0.00 0.00 0.00 1.75
4455 17183 6.348213 GCAGTTCGAAGCCTTTTAAGTATTCA 60.348 38.462 0.00 0.00 0.00 2.57
4456 17184 7.581476 CAGTTCGAAGCCTTTTAAGTATTCAA 58.419 34.615 0.00 0.00 0.00 2.69
4481 17209 0.679002 CATGAGTTGCAGGGTGGAGG 60.679 60.000 0.00 0.00 0.00 4.30
4483 17211 1.302832 GAGTTGCAGGGTGGAGGTG 60.303 63.158 0.00 0.00 0.00 4.00
4486 17214 3.132029 TTGCAGGGTGGAGGTGGTG 62.132 63.158 0.00 0.00 0.00 4.17
4517 17248 8.752005 AGCATCATAACAATAATACAACACCT 57.248 30.769 0.00 0.00 0.00 4.00
4556 17288 3.963428 TCCCTGAGTTTTGCTACTCTC 57.037 47.619 12.97 4.50 43.92 3.20
4558 17290 1.996191 CCTGAGTTTTGCTACTCTCGC 59.004 52.381 12.97 0.00 43.92 5.03
4578 17310 3.541632 GCGGTTTCTCATAATCCCTTGA 58.458 45.455 0.00 0.00 0.00 3.02
4587 17319 9.807921 TTTCTCATAATCCCTTGAAGTAGTTTT 57.192 29.630 0.00 0.00 0.00 2.43
4588 17320 9.449719 TTCTCATAATCCCTTGAAGTAGTTTTC 57.550 33.333 0.00 0.00 0.00 2.29
4602 17334 7.170998 TGAAGTAGTTTTCGAATCTTCAGAACC 59.829 37.037 17.55 2.54 37.13 3.62
4604 17336 5.674933 AGTTTTCGAATCTTCAGAACCAC 57.325 39.130 0.00 0.00 0.00 4.16
4608 17340 1.808411 GAATCTTCAGAACCACGCCA 58.192 50.000 0.00 0.00 0.00 5.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 9462 8.648693 ACTACTTAACCAGTACAGAGTTTCAAT 58.351 33.333 0.00 0.00 36.88 2.57
221 9670 4.080863 ACAACAGTCTGGACAGAAGAAGTT 60.081 41.667 3.18 4.30 39.48 2.66
231 9680 6.128007 CCAATATGGTAAACAACAGTCTGGAC 60.128 42.308 4.53 0.00 31.35 4.02
241 9690 5.080337 TGTTCCTGCCAATATGGTAAACAA 58.920 37.500 3.29 0.00 40.46 2.83
255 9704 3.005155 GCTATTCCATTGATGTTCCTGCC 59.995 47.826 0.00 0.00 0.00 4.85
256 9705 3.887716 AGCTATTCCATTGATGTTCCTGC 59.112 43.478 0.00 0.00 0.00 4.85
332 9781 3.194329 TGAGAGGAATGAGTACAGCACTG 59.806 47.826 0.00 0.00 37.72 3.66
658 10644 9.477484 CGACCACTATAGTAAGCATAATTTCTT 57.523 33.333 4.74 0.00 0.00 2.52
659 10645 8.639761 ACGACCACTATAGTAAGCATAATTTCT 58.360 33.333 4.74 0.00 0.00 2.52
660 10646 8.813643 ACGACCACTATAGTAAGCATAATTTC 57.186 34.615 4.74 0.00 0.00 2.17
1149 11716 6.060136 CCTGCATATATAGCATGGCATAAGT 58.940 40.000 0.00 0.00 41.82 2.24
1494 12742 1.893919 GCCGAGCAGAGGAGGTTTCT 61.894 60.000 0.00 0.00 0.00 2.52
1615 12863 4.037208 CAGCCCATGTATGTTTCATCTTCC 59.963 45.833 0.00 0.00 0.00 3.46
1625 12873 2.516930 GCGGCAGCCCATGTATGT 60.517 61.111 5.63 0.00 37.42 2.29
2063 13320 2.159037 GGTTTTCTACCGGCTTTTCGAG 59.841 50.000 0.00 0.00 37.12 4.04
2485 13744 2.736144 AACTGGAACGAATACGAGCA 57.264 45.000 0.00 0.00 42.66 4.26
2517 13776 1.602191 GAACAACGTTGCCGCAATAG 58.398 50.000 27.61 9.31 37.70 1.73
2658 14036 7.786464 AGGGATCAAAGCAATATTTGTATTCCT 59.214 33.333 0.00 9.78 40.36 3.36
2681 14060 1.679559 GCCTTTAGCAATGGCCAGGG 61.680 60.000 13.05 6.85 43.79 4.45
3200 14808 3.565307 TCAGACAAAGGACAAATGGCTT 58.435 40.909 0.00 0.00 27.23 4.35
3209 14817 6.017605 CCATATGTAATGCTCAGACAAAGGAC 60.018 42.308 1.24 0.00 0.00 3.85
3224 14835 5.657826 TTTGTGTGCAAGCCATATGTAAT 57.342 34.783 1.24 0.00 35.82 1.89
3332 14953 7.807687 ACATAACTACGTACAATCACAGTTC 57.192 36.000 0.00 0.00 0.00 3.01
3333 14954 7.487189 GCTACATAACTACGTACAATCACAGTT 59.513 37.037 0.00 0.00 0.00 3.16
3482 15371 3.670625 ACTTTGCCGTACTGCAGATTAA 58.329 40.909 23.35 3.36 43.21 1.40
3492 15381 7.806149 AAAATAAGCATTAACTTTGCCGTAC 57.194 32.000 0.00 0.00 41.06 3.67
3542 15432 7.275888 ACAAATTTGTAATGCTCTCTCACAA 57.724 32.000 22.10 0.00 40.16 3.33
3656 15553 4.186926 TGCATCTCAGCAACATAGAAGAC 58.813 43.478 0.00 0.00 42.46 3.01
3797 15748 2.872245 CCACCGGCATACACAATAGAAG 59.128 50.000 0.00 0.00 0.00 2.85
3799 15750 2.613026 CCACCGGCATACACAATAGA 57.387 50.000 0.00 0.00 0.00 1.98
3812 15763 3.879682 CACATCGCATGCCACCGG 61.880 66.667 13.15 0.00 0.00 5.28
3813 15764 3.879682 CCACATCGCATGCCACCG 61.880 66.667 13.15 0.00 0.00 4.94
3814 15765 2.342650 AACCACATCGCATGCCACC 61.343 57.895 13.15 0.00 0.00 4.61
3815 15766 1.153978 CAACCACATCGCATGCCAC 60.154 57.895 13.15 0.00 0.00 5.01
3818 15769 0.868602 GCATCAACCACATCGCATGC 60.869 55.000 7.91 7.91 0.00 4.06
3819 15770 0.736636 AGCATCAACCACATCGCATG 59.263 50.000 0.00 0.00 0.00 4.06
3820 15771 0.736636 CAGCATCAACCACATCGCAT 59.263 50.000 0.00 0.00 0.00 4.73
3821 15772 0.321475 TCAGCATCAACCACATCGCA 60.321 50.000 0.00 0.00 0.00 5.10
3822 15773 0.376152 CTCAGCATCAACCACATCGC 59.624 55.000 0.00 0.00 0.00 4.58
3823 15774 1.662629 GTCTCAGCATCAACCACATCG 59.337 52.381 0.00 0.00 0.00 3.84
3824 15775 2.983229 AGTCTCAGCATCAACCACATC 58.017 47.619 0.00 0.00 0.00 3.06
3825 15776 3.079578 CAAGTCTCAGCATCAACCACAT 58.920 45.455 0.00 0.00 0.00 3.21
3827 15778 2.481952 GACAAGTCTCAGCATCAACCAC 59.518 50.000 0.00 0.00 0.00 4.16
3828 15779 2.771089 GACAAGTCTCAGCATCAACCA 58.229 47.619 0.00 0.00 0.00 3.67
3829 15780 1.728971 CGACAAGTCTCAGCATCAACC 59.271 52.381 0.00 0.00 0.00 3.77
3830 15781 2.156504 CACGACAAGTCTCAGCATCAAC 59.843 50.000 0.00 0.00 0.00 3.18
3831 15782 2.224042 ACACGACAAGTCTCAGCATCAA 60.224 45.455 0.00 0.00 0.00 2.57
3832 15783 1.341209 ACACGACAAGTCTCAGCATCA 59.659 47.619 0.00 0.00 0.00 3.07
3834 15785 1.341209 TCACACGACAAGTCTCAGCAT 59.659 47.619 0.00 0.00 0.00 3.79
3836 15787 1.789464 CTTCACACGACAAGTCTCAGC 59.211 52.381 0.00 0.00 0.00 4.26
3837 15788 3.046390 GACTTCACACGACAAGTCTCAG 58.954 50.000 4.85 0.00 43.54 3.35
3838 15789 3.079960 GACTTCACACGACAAGTCTCA 57.920 47.619 4.85 0.00 43.54 3.27
3841 15792 3.187700 ACAAGACTTCACACGACAAGTC 58.812 45.455 4.01 4.01 46.10 3.01
3842 15793 3.247006 ACAAGACTTCACACGACAAGT 57.753 42.857 0.00 0.00 35.48 3.16
3843 15794 7.582435 AATATACAAGACTTCACACGACAAG 57.418 36.000 0.00 0.00 0.00 3.16
3844 15795 7.956420 AAATATACAAGACTTCACACGACAA 57.044 32.000 0.00 0.00 0.00 3.18
3845 15796 7.956420 AAAATATACAAGACTTCACACGACA 57.044 32.000 0.00 0.00 0.00 4.35
3876 15827 3.265791 CTTGACTAATGTCTGCTGGTCC 58.734 50.000 0.00 0.00 43.29 4.46
3925 15876 0.319083 CAAGCATCAGCCCAAGCAAA 59.681 50.000 0.00 0.00 43.56 3.68
3935 15886 3.597255 ACATCACAGAGTCAAGCATCAG 58.403 45.455 0.00 0.00 0.00 2.90
3947 15898 2.505407 CCCATCCACCTTACATCACAGA 59.495 50.000 0.00 0.00 0.00 3.41
3950 15901 1.064758 TGCCCATCCACCTTACATCAC 60.065 52.381 0.00 0.00 0.00 3.06
3981 15932 9.542462 GACCAACTATGTAACATGCTAAGATAA 57.458 33.333 0.00 0.00 0.00 1.75
3983 15934 6.701841 CGACCAACTATGTAACATGCTAAGAT 59.298 38.462 0.00 0.00 0.00 2.40
3985 15936 6.040247 TCGACCAACTATGTAACATGCTAAG 58.960 40.000 0.00 0.00 0.00 2.18
3989 16528 4.808895 TCATCGACCAACTATGTAACATGC 59.191 41.667 0.00 0.00 0.00 4.06
3992 16531 6.046593 GGATTCATCGACCAACTATGTAACA 58.953 40.000 0.00 0.00 0.00 2.41
3995 16534 4.039973 GGGGATTCATCGACCAACTATGTA 59.960 45.833 0.00 0.00 0.00 2.29
3999 16538 2.434336 CAGGGGATTCATCGACCAACTA 59.566 50.000 0.00 0.00 0.00 2.24
4011 16550 0.179034 CTGGCTGTAGCAGGGGATTC 60.179 60.000 6.18 0.00 44.36 2.52
4012 16551 1.918253 CTGGCTGTAGCAGGGGATT 59.082 57.895 6.18 0.00 44.36 3.01
4013 16552 2.750657 GCTGGCTGTAGCAGGGGAT 61.751 63.158 6.18 0.00 43.17 3.85
4014 16553 3.402681 GCTGGCTGTAGCAGGGGA 61.403 66.667 6.18 0.00 43.17 4.81
4020 16559 1.525535 CCCATCTGCTGGCTGTAGC 60.526 63.158 4.63 0.00 44.46 3.58
4021 16560 0.763652 ATCCCATCTGCTGGCTGTAG 59.236 55.000 3.10 3.10 44.46 2.74
4022 16561 2.101640 TATCCCATCTGCTGGCTGTA 57.898 50.000 0.00 0.00 44.46 2.74
4023 16562 1.216064 TTATCCCATCTGCTGGCTGT 58.784 50.000 0.00 0.00 44.46 4.40
4024 16563 2.228059 CTTTATCCCATCTGCTGGCTG 58.772 52.381 0.00 0.00 44.46 4.85
4025 16564 1.144503 CCTTTATCCCATCTGCTGGCT 59.855 52.381 0.00 0.00 44.46 4.75
4026 16565 1.143684 TCCTTTATCCCATCTGCTGGC 59.856 52.381 0.00 0.00 44.46 4.85
4027 16566 3.582998 TTCCTTTATCCCATCTGCTGG 57.417 47.619 0.00 0.00 45.51 4.85
4028 16567 5.195940 TCTTTTCCTTTATCCCATCTGCTG 58.804 41.667 0.00 0.00 0.00 4.41
4029 16568 5.456921 TCTTTTCCTTTATCCCATCTGCT 57.543 39.130 0.00 0.00 0.00 4.24
4030 16569 5.829924 TCATCTTTTCCTTTATCCCATCTGC 59.170 40.000 0.00 0.00 0.00 4.26
4031 16570 8.474710 AATCATCTTTTCCTTTATCCCATCTG 57.525 34.615 0.00 0.00 0.00 2.90
4032 16571 9.579932 GTAATCATCTTTTCCTTTATCCCATCT 57.420 33.333 0.00 0.00 0.00 2.90
4033 16572 9.354673 TGTAATCATCTTTTCCTTTATCCCATC 57.645 33.333 0.00 0.00 0.00 3.51
4034 16573 9.713684 TTGTAATCATCTTTTCCTTTATCCCAT 57.286 29.630 0.00 0.00 0.00 4.00
4035 16574 9.189156 CTTGTAATCATCTTTTCCTTTATCCCA 57.811 33.333 0.00 0.00 0.00 4.37
4036 16575 8.633561 CCTTGTAATCATCTTTTCCTTTATCCC 58.366 37.037 0.00 0.00 0.00 3.85
4037 16576 9.190317 ACCTTGTAATCATCTTTTCCTTTATCC 57.810 33.333 0.00 0.00 0.00 2.59
4040 16579 9.581289 TGAACCTTGTAATCATCTTTTCCTTTA 57.419 29.630 0.00 0.00 0.00 1.85
4041 16580 8.360390 GTGAACCTTGTAATCATCTTTTCCTTT 58.640 33.333 0.00 0.00 0.00 3.11
4042 16581 7.505585 TGTGAACCTTGTAATCATCTTTTCCTT 59.494 33.333 0.00 0.00 0.00 3.36
4043 16582 7.004086 TGTGAACCTTGTAATCATCTTTTCCT 58.996 34.615 0.00 0.00 0.00 3.36
4044 16583 7.214467 TGTGAACCTTGTAATCATCTTTTCC 57.786 36.000 0.00 0.00 0.00 3.13
4045 16584 9.528018 TTTTGTGAACCTTGTAATCATCTTTTC 57.472 29.630 0.00 0.00 0.00 2.29
4046 16585 9.313118 GTTTTGTGAACCTTGTAATCATCTTTT 57.687 29.630 0.00 0.00 0.00 2.27
4047 16586 7.926018 GGTTTTGTGAACCTTGTAATCATCTTT 59.074 33.333 0.81 0.00 37.34 2.52
4048 16587 7.433680 GGTTTTGTGAACCTTGTAATCATCTT 58.566 34.615 0.81 0.00 37.34 2.40
4049 16588 6.015434 GGGTTTTGTGAACCTTGTAATCATCT 60.015 38.462 7.77 0.00 40.15 2.90
4050 16589 6.156519 GGGTTTTGTGAACCTTGTAATCATC 58.843 40.000 7.77 0.00 40.15 2.92
4051 16590 5.600484 TGGGTTTTGTGAACCTTGTAATCAT 59.400 36.000 7.77 0.00 40.15 2.45
4052 16591 4.956700 TGGGTTTTGTGAACCTTGTAATCA 59.043 37.500 7.77 0.00 40.15 2.57
4053 16592 5.523438 TGGGTTTTGTGAACCTTGTAATC 57.477 39.130 7.77 0.00 40.15 1.75
4054 16593 6.098982 TGAATGGGTTTTGTGAACCTTGTAAT 59.901 34.615 7.77 0.00 40.15 1.89
4055 16594 5.422331 TGAATGGGTTTTGTGAACCTTGTAA 59.578 36.000 7.77 0.00 40.15 2.41
4056 16595 4.956700 TGAATGGGTTTTGTGAACCTTGTA 59.043 37.500 7.77 0.00 40.15 2.41
4057 16596 3.772025 TGAATGGGTTTTGTGAACCTTGT 59.228 39.130 7.77 0.00 40.15 3.16
4058 16597 4.119136 GTGAATGGGTTTTGTGAACCTTG 58.881 43.478 7.77 0.00 40.15 3.61
4059 16598 3.772025 TGTGAATGGGTTTTGTGAACCTT 59.228 39.130 7.77 0.00 40.15 3.50
4060 16599 3.370104 TGTGAATGGGTTTTGTGAACCT 58.630 40.909 7.77 0.00 40.15 3.50
4061 16600 3.716601 CTGTGAATGGGTTTTGTGAACC 58.283 45.455 0.00 0.00 39.56 3.62
4062 16601 3.123050 GCTGTGAATGGGTTTTGTGAAC 58.877 45.455 0.00 0.00 0.00 3.18
4063 16602 2.102252 GGCTGTGAATGGGTTTTGTGAA 59.898 45.455 0.00 0.00 0.00 3.18
4064 16603 1.686052 GGCTGTGAATGGGTTTTGTGA 59.314 47.619 0.00 0.00 0.00 3.58
4065 16604 1.688197 AGGCTGTGAATGGGTTTTGTG 59.312 47.619 0.00 0.00 0.00 3.33
4066 16605 1.688197 CAGGCTGTGAATGGGTTTTGT 59.312 47.619 6.28 0.00 0.00 2.83
4067 16606 1.606224 GCAGGCTGTGAATGGGTTTTG 60.606 52.381 17.16 0.00 0.00 2.44
4068 16607 0.681175 GCAGGCTGTGAATGGGTTTT 59.319 50.000 17.16 0.00 0.00 2.43
4069 16608 0.469705 TGCAGGCTGTGAATGGGTTT 60.470 50.000 17.16 0.00 0.00 3.27
4070 16609 0.469705 TTGCAGGCTGTGAATGGGTT 60.470 50.000 17.16 0.00 0.00 4.11
4071 16610 0.896940 CTTGCAGGCTGTGAATGGGT 60.897 55.000 17.16 0.00 0.00 4.51
4072 16611 1.888018 CTTGCAGGCTGTGAATGGG 59.112 57.895 17.16 0.00 0.00 4.00
4073 16612 1.214589 GCTTGCAGGCTGTGAATGG 59.785 57.895 14.45 2.44 0.00 3.16
4074 16613 1.214589 GGCTTGCAGGCTGTGAATG 59.785 57.895 21.07 6.02 37.85 2.67
4075 16614 1.980772 GGGCTTGCAGGCTGTGAAT 60.981 57.895 21.07 0.00 41.09 2.57
4076 16615 2.598394 GGGCTTGCAGGCTGTGAA 60.598 61.111 21.07 8.52 41.09 3.18
4077 16616 2.718487 AATGGGCTTGCAGGCTGTGA 62.718 55.000 21.07 4.07 41.09 3.58
4078 16617 2.221906 GAATGGGCTTGCAGGCTGTG 62.222 60.000 21.07 8.05 41.09 3.66
4079 16618 1.980772 GAATGGGCTTGCAGGCTGT 60.981 57.895 21.07 4.09 41.09 4.40
4080 16619 1.537814 TTGAATGGGCTTGCAGGCTG 61.538 55.000 21.07 10.94 41.09 4.85
4081 16620 1.228956 TTGAATGGGCTTGCAGGCT 60.229 52.632 21.07 0.00 41.09 4.58
4082 16621 1.079612 GTTGAATGGGCTTGCAGGC 60.080 57.895 13.24 13.24 40.51 4.85
4083 16622 0.971386 AAGTTGAATGGGCTTGCAGG 59.029 50.000 0.00 0.00 0.00 4.85
4084 16623 1.337447 CCAAGTTGAATGGGCTTGCAG 60.337 52.381 3.87 0.00 38.50 4.41
4085 16624 0.680618 CCAAGTTGAATGGGCTTGCA 59.319 50.000 3.87 0.00 38.50 4.08
4086 16625 0.681175 ACCAAGTTGAATGGGCTTGC 59.319 50.000 3.87 0.00 42.48 4.01
4087 16626 2.758009 CAACCAAGTTGAATGGGCTTG 58.242 47.619 3.87 0.00 45.28 4.01
4088 16627 1.070601 GCAACCAAGTTGAATGGGCTT 59.929 47.619 11.50 0.00 45.28 4.35
4089 16628 0.681175 GCAACCAAGTTGAATGGGCT 59.319 50.000 11.50 0.00 45.28 5.19
4090 16629 0.320683 GGCAACCAAGTTGAATGGGC 60.321 55.000 11.50 0.00 45.28 5.36
4091 16630 1.001181 CAGGCAACCAAGTTGAATGGG 59.999 52.381 11.50 0.00 45.28 4.00
4092 16631 1.606224 GCAGGCAACCAAGTTGAATGG 60.606 52.381 11.50 0.00 45.28 3.16
4093 16632 1.342174 AGCAGGCAACCAAGTTGAATG 59.658 47.619 11.50 9.20 45.28 2.67
4094 16633 1.342174 CAGCAGGCAACCAAGTTGAAT 59.658 47.619 11.50 0.00 45.28 2.57
4095 16634 0.746063 CAGCAGGCAACCAAGTTGAA 59.254 50.000 11.50 0.00 45.28 2.69
4096 16635 0.106769 TCAGCAGGCAACCAAGTTGA 60.107 50.000 11.50 0.00 45.28 3.18
4097 16636 0.031178 GTCAGCAGGCAACCAAGTTG 59.969 55.000 3.09 3.09 45.24 3.16
4098 16637 0.106519 AGTCAGCAGGCAACCAAGTT 60.107 50.000 0.00 0.00 37.17 2.66
4099 16638 0.764890 TAGTCAGCAGGCAACCAAGT 59.235 50.000 0.00 0.00 37.17 3.16
4100 16639 1.271054 ACTAGTCAGCAGGCAACCAAG 60.271 52.381 0.00 0.00 37.17 3.61
4101 16640 0.764890 ACTAGTCAGCAGGCAACCAA 59.235 50.000 0.00 0.00 37.17 3.67
4102 16641 1.275291 GTACTAGTCAGCAGGCAACCA 59.725 52.381 0.00 0.00 37.17 3.67
4103 16642 1.550976 AGTACTAGTCAGCAGGCAACC 59.449 52.381 0.00 0.00 37.17 3.77
4104 16643 2.996621 CAAGTACTAGTCAGCAGGCAAC 59.003 50.000 0.00 0.00 0.00 4.17
4105 16644 2.897326 TCAAGTACTAGTCAGCAGGCAA 59.103 45.455 0.00 0.00 0.00 4.52
4106 16645 2.231478 GTCAAGTACTAGTCAGCAGGCA 59.769 50.000 0.00 0.00 0.00 4.75
4107 16646 2.494073 AGTCAAGTACTAGTCAGCAGGC 59.506 50.000 0.00 0.00 36.36 4.85
4108 16647 3.129638 GGAGTCAAGTACTAGTCAGCAGG 59.870 52.174 0.00 0.00 39.07 4.85
4109 16648 3.759086 TGGAGTCAAGTACTAGTCAGCAG 59.241 47.826 0.00 0.00 39.07 4.24
4110 16649 3.763057 TGGAGTCAAGTACTAGTCAGCA 58.237 45.455 0.00 0.00 39.07 4.41
4111 16650 4.785511 TTGGAGTCAAGTACTAGTCAGC 57.214 45.455 0.00 0.00 39.07 4.26
4112 16651 6.925211 TGAATTGGAGTCAAGTACTAGTCAG 58.075 40.000 0.00 0.00 39.07 3.51
4113 16652 6.572509 GCTGAATTGGAGTCAAGTACTAGTCA 60.573 42.308 0.00 0.00 39.07 3.41
4114 16653 5.808030 GCTGAATTGGAGTCAAGTACTAGTC 59.192 44.000 0.00 0.00 39.07 2.59
4115 16654 5.482175 AGCTGAATTGGAGTCAAGTACTAGT 59.518 40.000 0.00 0.00 39.07 2.57
4116 16655 5.971763 AGCTGAATTGGAGTCAAGTACTAG 58.028 41.667 0.00 0.00 39.07 2.57
4117 16656 6.404403 CGTAGCTGAATTGGAGTCAAGTACTA 60.404 42.308 0.00 0.00 39.07 1.82
4118 16657 4.899352 AGCTGAATTGGAGTCAAGTACT 57.101 40.909 0.00 0.00 42.80 2.73
4119 16658 4.563184 CGTAGCTGAATTGGAGTCAAGTAC 59.437 45.833 0.00 0.00 36.19 2.73
4120 16659 4.744570 CGTAGCTGAATTGGAGTCAAGTA 58.255 43.478 0.00 0.00 36.19 2.24
4121 16660 3.589988 CGTAGCTGAATTGGAGTCAAGT 58.410 45.455 0.00 0.00 36.19 3.16
4258 16828 2.159627 CCGAAACAGGAACCAGAATTCG 59.840 50.000 15.34 15.34 38.24 3.34
4267 16843 5.638596 ATTGGTAAATCCGAAACAGGAAC 57.361 39.130 0.00 0.00 44.50 3.62
4288 16864 2.566833 TGGTGACTTGTAGCTGCAAT 57.433 45.000 17.94 8.27 0.00 3.56
4346 16922 2.490903 GCTGAACTGAAGCATGAATGGT 59.509 45.455 0.00 0.00 40.52 3.55
4347 16923 2.159282 GGCTGAACTGAAGCATGAATGG 60.159 50.000 0.00 0.00 42.69 3.16
4348 16924 2.490509 TGGCTGAACTGAAGCATGAATG 59.509 45.455 0.00 0.00 42.69 2.67
4349 16925 2.799017 TGGCTGAACTGAAGCATGAAT 58.201 42.857 0.00 0.00 42.69 2.57
4350 16926 2.275134 TGGCTGAACTGAAGCATGAA 57.725 45.000 0.00 0.00 42.69 2.57
4351 16927 2.502142 ATGGCTGAACTGAAGCATGA 57.498 45.000 0.00 0.00 42.69 3.07
4352 16928 3.693085 AGTAATGGCTGAACTGAAGCATG 59.307 43.478 0.00 0.00 42.69 4.06
4353 16929 3.960571 AGTAATGGCTGAACTGAAGCAT 58.039 40.909 0.00 0.00 42.69 3.79
4354 16930 3.423539 AGTAATGGCTGAACTGAAGCA 57.576 42.857 0.00 0.00 42.69 3.91
4355 16931 3.753272 TGAAGTAATGGCTGAACTGAAGC 59.247 43.478 0.00 0.00 40.06 3.86
4356 16932 7.615582 TTATGAAGTAATGGCTGAACTGAAG 57.384 36.000 0.00 0.00 0.00 3.02
4357 16933 7.283127 GGATTATGAAGTAATGGCTGAACTGAA 59.717 37.037 0.00 0.00 33.16 3.02
4358 16934 6.767902 GGATTATGAAGTAATGGCTGAACTGA 59.232 38.462 0.00 0.00 33.16 3.41
4359 16935 6.769822 AGGATTATGAAGTAATGGCTGAACTG 59.230 38.462 0.00 0.00 33.16 3.16
4360 16936 6.769822 CAGGATTATGAAGTAATGGCTGAACT 59.230 38.462 0.00 0.00 33.16 3.01
4428 17156 3.251004 ACTTAAAAGGCTTCGAACTGCAG 59.749 43.478 13.48 13.48 0.00 4.41
4430 17158 3.898517 ACTTAAAAGGCTTCGAACTGC 57.101 42.857 0.00 0.00 0.00 4.40
4431 17159 7.129109 TGAATACTTAAAAGGCTTCGAACTG 57.871 36.000 0.00 0.00 0.00 3.16
4432 17160 7.227910 TGTTGAATACTTAAAAGGCTTCGAACT 59.772 33.333 0.00 0.00 0.00 3.01
4433 17161 7.357303 TGTTGAATACTTAAAAGGCTTCGAAC 58.643 34.615 0.00 0.00 0.00 3.95
4434 17162 7.499321 TGTTGAATACTTAAAAGGCTTCGAA 57.501 32.000 0.00 0.00 0.00 3.71
4435 17163 7.606456 AGATGTTGAATACTTAAAAGGCTTCGA 59.394 33.333 0.00 0.00 0.00 3.71
4436 17164 7.752695 AGATGTTGAATACTTAAAAGGCTTCG 58.247 34.615 0.00 0.00 0.00 3.79
4437 17165 8.730680 TGAGATGTTGAATACTTAAAAGGCTTC 58.269 33.333 0.00 0.00 0.00 3.86
4438 17166 8.635765 TGAGATGTTGAATACTTAAAAGGCTT 57.364 30.769 0.00 0.00 0.00 4.35
4439 17167 8.680903 CATGAGATGTTGAATACTTAAAAGGCT 58.319 33.333 0.00 0.00 0.00 4.58
4440 17168 8.677300 TCATGAGATGTTGAATACTTAAAAGGC 58.323 33.333 0.00 0.00 0.00 4.35
4445 17173 8.668353 GCAACTCATGAGATGTTGAATACTTAA 58.332 33.333 29.27 0.00 42.35 1.85
4446 17174 7.823799 TGCAACTCATGAGATGTTGAATACTTA 59.176 33.333 29.27 3.45 42.35 2.24
4447 17175 6.656270 TGCAACTCATGAGATGTTGAATACTT 59.344 34.615 29.27 5.39 42.35 2.24
4448 17176 6.175471 TGCAACTCATGAGATGTTGAATACT 58.825 36.000 29.27 0.00 42.35 2.12
4449 17177 6.426980 TGCAACTCATGAGATGTTGAATAC 57.573 37.500 29.27 12.58 42.35 1.89
4450 17178 5.587443 CCTGCAACTCATGAGATGTTGAATA 59.413 40.000 29.27 12.15 42.35 1.75
4451 17179 4.398358 CCTGCAACTCATGAGATGTTGAAT 59.602 41.667 29.27 0.63 42.35 2.57
4452 17180 3.754850 CCTGCAACTCATGAGATGTTGAA 59.245 43.478 29.27 16.75 42.35 2.69
4453 17181 3.340928 CCTGCAACTCATGAGATGTTGA 58.659 45.455 29.27 13.84 42.35 3.18
4454 17182 2.422479 CCCTGCAACTCATGAGATGTTG 59.578 50.000 29.27 22.53 42.55 3.33
4455 17183 2.040813 ACCCTGCAACTCATGAGATGTT 59.959 45.455 29.27 11.27 34.22 2.71
4456 17184 1.632409 ACCCTGCAACTCATGAGATGT 59.368 47.619 29.27 10.80 34.22 3.06
4481 17209 4.009675 TGTTATGATGCTTCTTCCACCAC 58.990 43.478 0.88 0.00 0.00 4.16
4483 17211 5.841957 ATTGTTATGATGCTTCTTCCACC 57.158 39.130 0.88 0.00 0.00 4.61
4513 17244 9.114952 GGGATCTTTCTCTAAGAATTTAAGGTG 57.885 37.037 0.00 0.00 45.62 4.00
4514 17245 9.063484 AGGGATCTTTCTCTAAGAATTTAAGGT 57.937 33.333 0.00 0.00 45.62 3.50
4515 17246 9.336171 CAGGGATCTTTCTCTAAGAATTTAAGG 57.664 37.037 0.00 0.00 45.62 2.69
4523 17255 7.390027 CAAAACTCAGGGATCTTTCTCTAAGA 58.610 38.462 0.00 0.00 46.50 2.10
4526 17258 5.249393 AGCAAAACTCAGGGATCTTTCTCTA 59.751 40.000 0.00 0.00 28.98 2.43
4527 17259 4.042684 AGCAAAACTCAGGGATCTTTCTCT 59.957 41.667 0.00 0.00 30.60 3.10
4532 17264 4.534103 AGAGTAGCAAAACTCAGGGATCTT 59.466 41.667 14.07 0.00 46.89 2.40
4542 17274 0.317479 ACCGCGAGAGTAGCAAAACT 59.683 50.000 8.23 0.00 34.19 2.66
4556 17288 2.240493 AGGGATTATGAGAAACCGCG 57.760 50.000 0.00 0.00 0.00 6.46
4558 17290 5.186198 ACTTCAAGGGATTATGAGAAACCG 58.814 41.667 0.00 0.00 0.00 4.44
4578 17310 6.990349 TGGTTCTGAAGATTCGAAAACTACTT 59.010 34.615 0.00 3.48 0.00 2.24
4587 17319 1.671850 GGCGTGGTTCTGAAGATTCGA 60.672 52.381 0.00 0.00 0.00 3.71
4588 17320 0.721718 GGCGTGGTTCTGAAGATTCG 59.278 55.000 0.00 0.00 0.00 3.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.